Citrus Sinensis ID: 019822

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
Protein Sequence
MPVFVTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Secondary Structure (PSIPRED)
ccEEEEEEEEEcccccccccccccccccccEEEEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccccccEEEccEEEEEEEEcccccccEEEEccEEEEcccccccccEEEEccccccccccEEEccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccccHHHHHHHccccEEccccccccccHHHHHHHHcccccccEEEEEEccHHHHHHHHHHcccccEEEEEEEEccccccccccccccccccEEEEEEcccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccccEEEEEEc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEEcccccccccccEEEEcccccEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccccccccccccccccEEEccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEcHHHccHHHHHEEEEEccccccccEEEEccccHHHHHHHHHHccccccEEEEcccccccccEEEccHHHHcccEEEEccHHHccHHHHHHHHHHHHHccccccHHHEEEEEEHHHHHHHHHHHHcccccEEEEEc
Coil and Loop (DISEMBL)
MPVFVTLISFALKDSQRLFILVFSGTKVSGKVVESAgdevkevkegdiviptyigeckecenctsEMTNLCLKYpialnglmldstsrmsvrgqKLYHIFScstwseymvidanyvvkvdpsidpsdasflscgfttgyGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIigidknpwkkekgkafgmtdfinpddepnkSISELVKGIThgmgvdycfectgvpslLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACggrtlkgttfggiktksdlptlldkcknkeFKLHQLLTHHVKLEEIDKAIQLlkqpdcvkvliti
Flexible Loop (DISEMBL)
MPVFVTLISFALKDSQRLFILVFSgtkvsgkvvesagdevkevkegdiviptyiGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAkiigidknpwkkEKGKAFGMtdfinpddepnKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGgrtlkgttfggiktksdlpTLLDKCKNKEFKLHQLLTHHVKLEEIDKaiqllkqpdCVKVLITI
Low Complexity Region (SEG)
MPVFVTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKgssvavlglgtvglgavdgaRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTkvgkgkvivigvgvDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Disordered region (IsUnstruct)
**VFVTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI*********ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI**
Disordered Region (DISOPRED)
*PVFVTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Disordered Region (DISEMBL)
MPVFVTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Disordered Region (DISPRO)
MPVFVTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPVFVTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	335	2.2.26 [Sep-21-2011]
Q9FH04	390	Alcohol dehydrogenase-lik	yes	no	0.898	0.771	0.437	4e-69
Q9SK87	386	Alcohol dehydrogenase-lik	no	no	0.895	0.777	0.441	2e-66
Q0V7W6	389	Alcohol dehydrogenase-lik	no	no	0.895	0.771	0.444	2e-66
Q9SK86	388	Alcohol dehydrogenase-lik	no	no	0.895	0.773	0.437	1e-64
A1L4Y2	394	Alcohol dehydrogenase-lik	no	no	0.949	0.807	0.414	2e-64
Q96533	379	Alcohol dehydrogenase cla	no	no	0.946	0.836	0.419	8e-64
Q8LEB2	381	Alcohol dehydrogenase-lik	no	no	0.943	0.829	0.409	7e-63
A2XAZ3	381	Alcohol dehydrogenase cla	N/A	no	0.946	0.832	0.410	4e-62
Q0DWH1	381	Alcohol dehydrogenase cla	no	no	0.946	0.832	0.410	4e-62
P80572	378	Alcohol dehydrogenase cla	N/A	no	0.940	0.833	0.416	5e-62

>sp|Q9FH04|ADHL7_ARATH Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1

 Score =  261 bits (668), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 134/306 (43%), Positives = 200/306 (65%), Gaps = 5/306 (1%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM--LDSTSRM 89
           VVES G+ VKEV EGD V+PT++ +C +C +C S  +NLC K+P  ++  M   D++SR 
Sbjct: 83  VVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSPWMPRYDNSSRF 142

Query: 90  S-VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
           + + G+ L+H  + S++SEY V+D   VVK+D SI PS A  LSCG +TG GAAW+ AKV
Sbjct: 143 TDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGVSTGVGAAWETAKV 202

Query: 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
           EKGS+V + GLG++GL   +GAR+ GA++IIG+D NP K + G+ FG+T+F+N       
Sbjct: 203 EKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVTEFVNSMTCEKN 262

Query: 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG-VDAMVPLNVIA 267
            +SE++  +T G G DYCFEC G  SL+ EA    + G GK I +GV    + + L+   
Sbjct: 263 RVSEVINEMTDG-GADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDKPGSQICLDSFD 321

Query: 268 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
           +   G+ L G+ FGG+K K+ +P LL +  + E +L + +TH +K EEI+ A QLL +  
Sbjct: 322 VLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEINDAFQLLLEGK 381

Query: 328 CVKVLI 333
           C++ ++
Sbjct: 382 CIRCVL 387

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|Q9SK87|ADHL2_ARATH Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1

 Score =  253 bits (645), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 135/306 (44%), Positives = 195/306 (63%), Gaps = 6/306 (1%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP--IALNGLMLDSTSRM 89
           VVES G++V   K+GD+V+P +  +C+EC+ C S  +N C KY      N      TSR 
Sbjct: 79  VVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYLSNTRRYGMTSRF 138

Query: 90  -SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
              RG+ ++H    S+++EY V+D  ++VK+ P I    A+ LSC   TG GAAWK A V
Sbjct: 139 KDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVATGLGAAWKVADV 198

Query: 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
           E+GS+V + GLG VGL   +G R+ GAAKIIG+D NP K E GK FG+TDF+NP     K
Sbjct: 199 EEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFGITDFVNPALCGEK 258

Query: 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL 268
           +ISE+++ +T  +G DY FEC G+ SL+ EA ++T+ G GK IV+G+   A+ P+++ + 
Sbjct: 259 TISEVIREMTD-VGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGMEQKAL-PISLGSY 316

Query: 269 -ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
               GRT+ GT FGG+K K D+P L+D+   KE  L  L+TH +  EEI+KA  LL + +
Sbjct: 317 DLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEEINKAFHLLAEGN 376

Query: 328 CVKVLI 333
            ++ +I
Sbjct: 377 SIRCII 382

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q0V7W6|ADHL5_ARATH Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1

 Score =  253 bits (645), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 136/306 (44%), Positives = 189/306 (61%), Gaps = 6/306 (1%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP--IALNGLMLDSTSRM 89
           V+ES G+ V   ++GD+V+P +   C+EC +C S  +N C ++      N      TSR 
Sbjct: 82  VIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSNTRRYGMTSRF 141

Query: 90  -SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
               G+ +YH    S++SEY V+D  ++VK+ P I    A+ LSCG +TG GAAWK A V
Sbjct: 142 KDSFGEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTGIGAAWKVANV 201

Query: 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
           EKGS+VAV GLG VGL   +GAR+ GA KIIG+D NP K E GK FG TDFIN       
Sbjct: 202 EKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFTDFINSTLCGEN 261

Query: 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL 268
            ISE++K +T G GVDY FEC G+PSLL+EA  +T+ G GK +V+G+    + P+++ + 
Sbjct: 262 KISEVIKEMTGG-GVDYSFECVGLPSLLTEAFSSTRTGSGKTVVLGID-KHLTPVSLGSF 319

Query: 269 -ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
               GR + G+ FGG+K K D+P L+D    KE  L   +TH +K EEI+KA  LL Q  
Sbjct: 320 DLLRGRHVCGSLFGGLKPKLDIPILVDHYLKKELNLDSFITHELKFEEINKAFDLLVQGK 379

Query: 328 CVKVLI 333
            ++ ++
Sbjct: 380 SLRCIL 385

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q9SK86|ADHL1_ARATH Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1

 Score =  246 bits (629), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 134/306 (43%), Positives = 191/306 (62%), Gaps = 6/306 (1%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP--IALNGLMLDSTSRM 89
           VVES G+ V   K+GD+V+P +   C+EC++C S  TN C +Y      N       SR 
Sbjct: 81  VVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGMASRF 140

Query: 90  -SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
               G+ ++H    S++SEY V+D  ++VK+ P I    A+ LSCG +TG GAAWK A V
Sbjct: 141 KDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTGIGAAWKVANV 200

Query: 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
           E+GS++A+ GLG VGL   +GAR+ GAAKIIGID N  K E GK FG TDFINP     K
Sbjct: 201 EEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGFTDFINPTLCGEK 260

Query: 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL 268
            ISE++K +T G GVDY FEC G+ SLL+EA  +T+ G GK +++G+   A  P+++ + 
Sbjct: 261 KISEVIKEMTEG-GVDYSFECVGLASLLNEAFISTRTGTGKTVMLGMEKHA-APISLGSF 318

Query: 269 -ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
               GR + G+ FGG+K+K D+P L+D    KE  L   +TH +  +EI+KA  LL++  
Sbjct: 319 DLLRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFITHELNFKEINKAFALLEEGK 378

Query: 328 CVKVLI 333
            ++ ++
Sbjct: 379 SLRCIL 384

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|A1L4Y2|ADHL3_ARATH Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1

 Score =  246 bits (627), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 139/335 (41%), Positives = 200/335 (59%), Gaps = 17/335 (5%)

Query: 13  KDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCL 72
            +++R F  +     V   +VES G+ VK+VKEGD VIPT+ GEC EC+ C  E +NLC 
Sbjct: 59  NEAERAFPRILGHEAVG--IVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCE 116

Query: 73  KYPI-ALNGLML-DSTSRMSV---------RGQKLYHIFSCSTWSEYMVIDANYVVKVDP 121
           +Y +  +  +M+ D  +R S          + Q +YH  + ST++EY V+D+  VVK+DP
Sbjct: 117 RYHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDP 176

Query: 122 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGI 181
           +      S LSCG +TG GAAW  A V++G S AV GLG+VGL   +GAR  GA++IIG+
Sbjct: 177 NSPLKQMSLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGV 236

Query: 182 DKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241
           D N  K EKGK  G+TDFINP D   K + ++++ IT G GVDY FECTG   +L EA  
Sbjct: 237 DANASKFEKGKLMGVTDFINPKDL-TKPVHQMIREITGG-GVDYSFECTGNVDVLREAFL 294

Query: 242 TTKVGKGKVIVIGV-GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 300
           +T VG G  +++G+      +PL+ + L   GR + G+ FGG K KS LP    +C    
Sbjct: 295 STHVGWGSTVLVGIYPTPRTLPLHPMELF-DGRRITGSVFGGFKPKSQLPNFAQQCMKGV 353

Query: 301 FKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 335
            KL   +T+ +  E+I+ A QLL+    ++ ++ I
Sbjct: 354 VKLEPFITNELPFEKINDAFQLLRDGKSLRCILQI 388

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q96533|ADHX_ARATH Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2

 Score =  244 bits (622), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 139/331 (41%), Positives = 199/331 (60%), Gaps = 14/331 (4%)

Query: 9   SFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMT 68
           +++ KD + LF  +  G + +G +VES G+ V EV+ GD VIP Y  EC+EC+ C S  T
Sbjct: 53  TWSGKDPEGLFPCIL-GHEAAG-IVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKT 110

Query: 69  NLCLKYPIALN-GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 126
           NLC K   A   G+M+ D  SR SV G+ +YH    ST+S+Y V+    V K+DP+    
Sbjct: 111 NLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLD 170

Query: 127 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 186
               L CG  TG GA W  AKVE GS+VA+ GLGTVGL   +GA+  GA++IIGID +  
Sbjct: 171 KVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSK 230

Query: 187 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 246
           K E  K FG+ +F+NP D  +K I E++  +T G GVDY FEC G  S++  ALE    G
Sbjct: 231 KYETAKKFGVNEFVNPKDH-DKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 288

Query: 247 KGKVIVIGVGVD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 302
            G  +++GV       +  P  ++     GR  KGT FGG K+++ +P L++K  NKE K
Sbjct: 289 WGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSRTQVPWLVEKYMNKEIK 344

Query: 303 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 333
           + + +TH++ L EI+KA  LL +  C++ ++
Sbjct: 345 VDEYITHNLTLGEINKAFDLLHEGTCLRCVL 375

Plays a central role in formaldehyde detoxification.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q8LEB2|ADHL6_ARATH Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2

 Score =  241 bits (614), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 133/325 (40%), Positives = 197/325 (60%), Gaps = 9/325 (2%)

Query: 14  DSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLK 73
           +SQ L   +F G + +G +VES G+ V E ++GD V+  + GEC  C +C S  +N+C  
Sbjct: 61  ESQSLLPRIF-GHEAAG-IVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQV 118

Query: 74  YPIALNGLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLS 132
             +   GLM  D  +R S++G+ +YH  + S++SEY V+ +   VKVDP         LS
Sbjct: 119 LGMERKGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLS 178

Query: 133 CGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK 192
           CG   G GAAW  A V+KGSSV + GLGTVGL    GA++ GAA+I+G+D NP K E+ K
Sbjct: 179 CGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAK 238

Query: 193 AFGMTDFINPDD--EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKV 250
            FG+TDFIN +D  EP   I +++K +T G G D+ FEC G   + + AL++   G G  
Sbjct: 239 TFGVTDFINSNDLSEP---IPQVIKRMTGG-GADFSFECVGDTGIATTALQSCSDGWGMT 294

Query: 251 IVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHH 310
           + +GV            L   G++LKGT FGG K KSDLP+L+DK  NKE  + + +TH+
Sbjct: 295 VTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHN 354

Query: 311 VKLEEIDKAIQLLKQPDCVKVLITI 335
           +  +EI+KA  L+++  C++ ++ +
Sbjct: 355 LSFDEINKAFVLMREGKCLRCVLHM 379

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|A2XAZ3|ADHX_ORYSI Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1

 Score =  238 bits (608), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 198/331 (59%), Gaps = 14/331 (4%)

Query: 9   SFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMT 68
           +++ KD + LF  +  G + +G +VES G+ V EV+ GD VIP Y  EC+EC+ C S  T
Sbjct: 55  TWSGKDPEGLFPCIL-GHEAAG-IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKT 112

Query: 69  NLCLKYPIALN-GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 126
           NLC K   A   G+M+ D  SR S+ G+ +YH    ST+S+Y V+    V K++P     
Sbjct: 113 NLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLD 172

Query: 127 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 186
               L CG +TG GA W  AKVE GS VA+ GLGTVGL   +GA+  GA++IIGID +  
Sbjct: 173 KVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSK 232

Query: 187 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 246
           K +  K FG+T+F+NP D  +K I +++  +T G GVDY FEC G  S++  ALE    G
Sbjct: 233 KFDVAKNFGVTEFVNPKDH-DKPIQQVIVDLTDG-GVDYSFECIGNVSVMRSALECCHKG 290

Query: 247 KGKVIVIGVGVD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 302
            G  +++GV       +  P  ++     GR  KGT FGG K++S +P L++K  NKE K
Sbjct: 291 WGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSRSQVPWLVEKYLNKEIK 346

Query: 303 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 333
           + + +TH + L +I+KA  LL +  C++ ++
Sbjct: 347 VDEYVTHSMNLTDINKAFDLLHEGGCLRCVL 377

Oryza sativa subsp. indica (taxid: 39946)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|Q0DWH1|ADHX_ORYSJ Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1

 Score =  238 bits (607), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 198/331 (59%), Gaps = 14/331 (4%)

Query: 9   SFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMT 68
           +++ KD + LF  +  G + +G +VES G+ V EV+ GD VIP Y  EC+EC+ C S  T
Sbjct: 55  TWSGKDPEGLFPCIL-GHEAAG-IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKT 112

Query: 69  NLCLKYPIALN-GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 126
           NLC K   A   G+M+ D  SR S+ G+ +YH    ST+S+Y V+    V K++P     
Sbjct: 113 NLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLD 172

Query: 127 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 186
               L CG +TG GA W  AKVE GS VA+ GLGTVGL   +GA+  GA++IIGID +  
Sbjct: 173 KVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSK 232

Query: 187 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 246
           K +  K FG+T+F+NP D  +K I +++  +T G GVDY FEC G  S++  ALE    G
Sbjct: 233 KFDVAKNFGVTEFVNPKDH-DKPIQQVIVDLTDG-GVDYSFECIGNVSVMRSALECCHKG 290

Query: 247 KGKVIVIGVGVD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 302
            G  +++GV       +  P  ++     GR  KGT FGG K++S +P L++K  NKE K
Sbjct: 291 WGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSRSQVPWLVEKYLNKEIK 346

Query: 303 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 333
           + + +TH + L +I+KA  LL +  C++ ++
Sbjct: 347 VDEYVTHSMNLTDINKAFDLLHEGGCLRCVL 377

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

>sp|P80572|ADHX_PEA Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1

 Score =  238 bits (607), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 137/329 (41%), Positives = 193/329 (58%), Gaps = 14/329 (4%)

Query: 13  KDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCL 72
           KD + LF  +  G + +G +VES G+ V +VK GD VIP+Y  EC EC+ C S  TNLC 
Sbjct: 56  KDPEGLFPCIL-GHEAAG-IVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCG 113

Query: 73  KYPIA--LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF 130
           K   A  +  +M D  SR SV+G+ +YH    ST+S+Y V+    V K+ P         
Sbjct: 114 KVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCL 173

Query: 131 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 190
           L CG  TG GA W  AKVE GS VA+ GLGTVGL   +GA+  GA++IIGID +  K + 
Sbjct: 174 LGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDT 233

Query: 191 GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKV 250
            K FG+T+FINP D   K I +++  +T G GVDY FEC G  S++  ALE    G G  
Sbjct: 234 AKNFGVTEFINPKDH-EKPIQQVIIDLTDG-GVDYSFECLGNVSVMRSALECCHKGWGTS 291

Query: 251 IVIGVGVD----AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQL 306
           +++GV       +  P  ++     GR  KGT FGG K++S +P L++K   KE K+ + 
Sbjct: 292 VIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEY 347

Query: 307 LTHHVKLEEIDKAIQLLKQPDCVKVLITI 335
           +TH++ L EI+KA  LL +  C++ ++ +
Sbjct: 348 ITHNLTLLEINKAFDLLHEGQCLRCVLAV 376

Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
224142703	377	predicted protein [Populus trichocarpa]	0.904	0.803	0.710	1e-123
225435026	392	PREDICTED: alcohol dehydrogenase-like 1-	0.901	0.770	0.671	1e-117
297746116	527	unnamed protein product [Vitis vinifera]	0.901	0.573	0.662	1e-115
388507902	374	unknown [Lotus japonicus]	0.895	0.802	0.662	1e-114
367460047	375	alcohol dehydrogenase-like [Glycine max]	0.901	0.805	0.654	1e-114
224144870	336	predicted protein [Populus trichocarpa]	0.898	0.895	0.669	1e-114
356543227	375	PREDICTED: alcohol dehydrogenase-like 2-	0.901	0.805	0.651	1e-114
147843919	402	hypothetical protein VITISV_023790 [Viti	0.910	0.758	0.649	1e-114
224144873	378	predicted protein [Populus trichocarpa]	0.901	0.798	0.667	1e-113
357487763	374	Alcohol dehydrogenase class-3 [Medicago	0.901	0.807	0.638	1e-113

>gi|224142703|ref|XP_002324694.1| predicted protein [Populus trichocarpa] gi|222866128|gb|EEF03259.1| predicted protein [Populus trichocarpa]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 216/304 (71%), Positives = 254/304 (83%), Gaps = 1/304 (0%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VVES G+ V+++KEGD+VIP Y+GEC+ECENCTS  TNLCLKYP+ LNGLM D TSRMS+
Sbjct: 75  VVESIGEGVRDLKEGDLVIPAYLGECQECENCTSGKTNLCLKYPLILNGLMPDGTSRMSI 134

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
            GQKLYH+ +CSTWSEYMVID NYVVK+DPSID   ASFLSCGF+TG+G+AW+EA VEKG
Sbjct: 135 NGQKLYHLITCSTWSEYMVIDTNYVVKIDPSIDLPHASFLSCGFSTGFGSAWREANVEKG 194

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
           SSVAV+GLG VGLGA++GARM GAAKIIGIDKN  K+EKG+AFGMTDFINPD+  NK IS
Sbjct: 195 SSVAVIGLGAVGLGAIEGARMQGAAKIIGIDKNEKKREKGQAFGMTDFINPDEYFNKPIS 254

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 271
           EL+K IT G+GVDYCFECTGV  L++EAL  TK GKG+  V+G G D  V +N + L CG
Sbjct: 255 ELIKDITGGLGVDYCFECTGVGPLINEALLATKPGKGETFVVGAGTDLTVSINFLPLLCG 314

Query: 272 GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKV 331
           G TLKG+ FGG+K KS LP LLDKCKNKEF L +LLTH V L++I+KA QLL+QPDCVKV
Sbjct: 315 G-TLKGSLFGGLKIKSHLPILLDKCKNKEFNLDELLTHQVMLDDINKAFQLLEQPDCVKV 373

Query: 332 LITI 335
           LI +
Sbjct: 374 LIKM 377

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435026|ref|XP_002281265.1| PREDICTED: alcohol dehydrogenase-like 1-like [Vitis vinifera]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/304 (67%), Positives = 252/304 (82%), Gaps = 2/304 (0%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VVES G+ V  +KEGD+VIPTY+GEC ECENC S  TN+CLK+P+   GLM D TSRMS+
Sbjct: 91  VVESVGENVTGLKEGDVVIPTYLGECGECENCRSPKTNVCLKHPVTFTGLMPDGTSRMSI 150

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
           RGQ+L+HIFSCSTW+EYMV++ANY+VK+DP I PSDASFLSCGF+TGYGAAWK+AKVEKG
Sbjct: 151 RGQRLHHIFSCSTWTEYMVVNANYLVKIDPRIAPSDASFLSCGFSTGYGAAWKDAKVEKG 210

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
           SSVAVLGLG VGLG + GAR  GAA+IIGIDKN  ++E G+AFGMTDFINP +E NKSIS
Sbjct: 211 SSVAVLGLGAVGLGVLQGARNQGAARIIGIDKNERRREVGEAFGMTDFINP-NESNKSIS 269

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 271
           ELV  +T G GVDY FECTG+PSL++EAL+ TKVGKG  +V+G+     V ++++AL   
Sbjct: 270 ELVNELTGGQGVDYSFECTGIPSLVNEALQATKVGKGMSMVLGIANVPTVDISLMALL-S 328

Query: 272 GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKV 331
           G+TLKG  FGGIK +SD+P ++DKC NK+ +L +LLTH V+LE+++KA +LLKQPDCVKV
Sbjct: 329 GKTLKGCFFGGIKVQSDIPVIVDKCINKDIQLDELLTHEVQLEDMNKAFELLKQPDCVKV 388

Query: 332 LITI 335
           LI I
Sbjct: 389 LIKI 392

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746116|emb|CBI16172.3| unnamed protein product [Vitis vinifera]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 204/308 (66%), Positives = 252/308 (81%), Gaps = 6/308 (1%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VVES G+ V  +KEGD+VIPTY+GEC ECENC S  TN+CLK+P+   GLM D TSRMS+
Sbjct: 222 VVESVGENVTGLKEGDVVIPTYLGECGECENCRSPKTNVCLKHPVTFTGLMPDGTSRMSI 281

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
           RGQ+L+HIFSCSTW+EYMV++ANY+VK+DP I PSDASFLSCGF+TGYGAAWK+AKVEKG
Sbjct: 282 RGQRLHHIFSCSTWTEYMVVNANYLVKIDPRIAPSDASFLSCGFSTGYGAAWKDAKVEKG 341

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
           SSVAVLGLG VGLG + GAR  GAA+IIGIDKN  ++E G+AFGMTDFINP +E NKSIS
Sbjct: 342 SSVAVLGLGAVGLGVLQGARNQGAARIIGIDKNERRREVGEAFGMTDFINP-NESNKSIS 400

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 271
           ELV  +T G GVDY FECTG+PSL++EAL+ TKVGKG  +V+G+     V ++++AL   
Sbjct: 401 ELVNELTGGQGVDYSFECTGIPSLVNEALQATKVGKGMSMVLGIANVPTVDISLMALL-S 459

Query: 272 GRTLKGTTFGGIKTKSDLPTLLDKCKNK----EFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
           G+TLKG  FGGIK +SD+P ++DKC NK    + +L +LLTH V+LE+++KA +LLKQPD
Sbjct: 460 GKTLKGCFFGGIKVQSDIPVIVDKCINKASSLDIQLDELLTHEVQLEDMNKAFELLKQPD 519

Query: 328 CVKVLITI 335
           CVKVLI I
Sbjct: 520 CVKVLIKI 527

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507902|gb|AFK42017.1| unknown [Lotus japonicus]

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 200/302 (66%), Positives = 244/302 (80%), Gaps = 2/302 (0%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VVES GD+VK +KEGD+VIPTYIGEC+ECENC S  TNLCL YPI L GLM D+TSRMS+
Sbjct: 73  VVESVGDQVKSLKEGDVVIPTYIGECQECENCVSGKTNLCLTYPIRLTGLMPDNTSRMSI 132

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
           RGQ+L+H+ SC+TWSEYMV D NYV+KVDPSIDP+ ASF+SCGF+TG+GAAWK+AKVE G
Sbjct: 133 RGQRLHHVLSCATWSEYMVADVNYVLKVDPSIDPAHASFISCGFSTGFGAAWKQAKVESG 192

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
           SSVAV+GLG VGLGA+ GA+M GA KIIGIDKN  K+EKG+AFGMT FINP D   KS+S
Sbjct: 193 SSVAVIGLGAVGLGAISGAKMLGATKIIGIDKNEMKREKGEAFGMTHFINPGDS-TKSVS 251

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 271
           ELVK ++ G  VDY FECTGVP LL+E+LE TKVG G+ I IGVG + +VP  + ++   
Sbjct: 252 ELVKELSGGRSVDYSFECTGVPPLLTESLEATKVGTGETIAIGVGTEPIVPFGIGSILY- 310

Query: 272 GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKV 331
           GRTL+G+ FGG+KT SDL  + +KC+ +EF L +L TH V L +I KA +LLKQP+C KV
Sbjct: 311 GRTLRGSVFGGLKTISDLSIIANKCQKEEFPLQELFTHEVTLADIRKAFELLKQPNCAKV 370

Query: 332 LI 333
           +I
Sbjct: 371 VI 372

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|367460047|ref|NP_001238395.2| alcohol dehydrogenase-like [Glycine max]

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 199/304 (65%), Positives = 247/304 (81%), Gaps = 2/304 (0%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           ++ES GD+V  +KEGD+VIPTYIGEC+ECENC SE TNLC+ YP+   GLM D+TSRMS+
Sbjct: 73  IIESVGDQVANLKEGDVVIPTYIGECQECENCVSEKTNLCMTYPVRWTGLMPDNTSRMSI 132

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
           RG+++YHIFSC+TWSEYMV DANYV+KVDP+ID + ASF+SCGF+TG+GAAWKEAKVE G
Sbjct: 133 RGERIYHIFSCATWSEYMVSDANYVLKVDPTIDRAHASFISCGFSTGFGAAWKEAKVESG 192

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
           S+VAV GLG VGLGAV G++M GA++IIGID N  K+ KG+AFG+TDFINP D  NKS S
Sbjct: 193 STVAVFGLGAVGLGAVIGSKMQGASRIIGIDTNENKRAKGEAFGITDFINPGDS-NKSAS 251

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 271
           ELVK ++ GMGVDY FECTGV +LLSE+LE TK+G GK IVIGVG++  +PL + A+   
Sbjct: 252 ELVKELSGGMGVDYSFECTGVSTLLSESLEATKIGTGKAIVIGVGIEITLPLGLFAILL- 310

Query: 272 GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKV 331
           GRTLKG+ FGG++  SDL  L DK   KEF L +L TH V L +I+KA +LLKQP+CVKV
Sbjct: 311 GRTLKGSVFGGLRAISDLSILADKGHKKEFPLQELFTHEVTLADINKAFELLKQPNCVKV 370

Query: 332 LITI 335
           +I +
Sbjct: 371 VINM 374

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144870|ref|XP_002325445.1| predicted protein [Populus trichocarpa] gi|222862320|gb|EEE99826.1| predicted protein [Populus trichocarpa]

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/303 (66%), Positives = 249/303 (82%), Gaps = 2/303 (0%)

Query: 33  VESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVR 92
           VES GDEV  ++EGD VIPT + EC+ CENCTS  TNLCL YP++ +GLMLD TSRMS++
Sbjct: 36  VESFGDEVNGLEEGDYVIPTMLAECEACENCTSANTNLCLTYPLSRSGLMLDGTSRMSIK 95

Query: 93  GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGS 152
           GQKLYH+F+CSTWSEYMVID+NYV K+DPSI    AS LSCGF+TG+GAAWKEA+V+ GS
Sbjct: 96  GQKLYHMFTCSTWSEYMVIDSNYVNKIDPSIPLPHASVLSCGFSTGFGAAWKEAQVKMGS 155

Query: 153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISE 212
           +VAVLGLG VGLG  +GARM GAAKIIG+DKN  KK+KG AFGMTDFINPD+  +KSIS+
Sbjct: 156 TVAVLGLGAVGLGVTEGARMLGAAKIIGVDKNSMKKDKGLAFGMTDFINPDECSDKSISQ 215

Query: 213 LVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGG 272
           ++K +T GMGVDYCFEC G  SL+++A++ TK GKGK IVIG G+++ V ++   L   G
Sbjct: 216 MIKDLTGGMGVDYCFECVGAESLINQAIQATKEGKGKAIVIGGGINS-VKIDYAPLL-SG 273

Query: 273 RTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVL 332
           RTLKG+ FGG+K KSDLP L++KCKNKEF L +LLTH V L++I+KA +LLKQPDCVKVL
Sbjct: 274 RTLKGSVFGGLKVKSDLPILMEKCKNKEFDLDELLTHEVTLQDIEKAFELLKQPDCVKVL 333

Query: 333 ITI 335
           I I
Sbjct: 334 IKI 336

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543227|ref|XP_003540064.1| PREDICTED: alcohol dehydrogenase-like 2-like isoform 1 [Glycine max]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/304 (65%), Positives = 246/304 (80%), Gaps = 2/304 (0%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           ++ES GD+V  +KEGD+VIPTYIGEC+ECENC SE TNLC+ YP+   GLM D+TSRMS+
Sbjct: 73  IIESVGDQVTNLKEGDVVIPTYIGECQECENCVSEKTNLCMTYPVRWTGLMPDNTSRMSI 132

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
           RG+++YHIFSC+TWSEYMV DANYV+KVDP+ID + ASF+SCGF+TG+GAAWKEAKVE G
Sbjct: 133 RGERIYHIFSCATWSEYMVSDANYVLKVDPTIDRAHASFISCGFSTGFGAAWKEAKVESG 192

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
           S+VAV GLG VGLGAV G++M GA++IIGID N  K+ KG+AFG+TDFINP D  NKS S
Sbjct: 193 STVAVFGLGAVGLGAVIGSKMQGASRIIGIDTNENKRAKGEAFGITDFINPGDS-NKSAS 251

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 271
           ELVK ++ GMG DY FECTGV +LLSE+LE TK+G GK IVIGVG++  +PL + A+   
Sbjct: 252 ELVKELSGGMGADYSFECTGVSTLLSESLEATKIGTGKAIVIGVGIEITLPLGLFAILL- 310

Query: 272 GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKV 331
           GRTLKG+ FGG++  SDL  L DK   KEF L +L TH V L +I+KA +LLKQP+CVKV
Sbjct: 311 GRTLKGSVFGGLRAISDLSILADKGHKKEFPLQELFTHEVTLADINKAFELLKQPNCVKV 370

Query: 332 LITI 335
           +I +
Sbjct: 371 VINM 374

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147843919|emb|CAN83716.1| hypothetical protein VITISV_023790 [Vitis vinifera]

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/311 (64%), Positives = 251/311 (80%), Gaps = 6/311 (1%)

Query: 24  SGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           S  +V   VVES G+ V  +KEGD+VIPTY+GEC ECENC S  TN+CLK+P+   GLM 
Sbjct: 53  SEVRVKMLVVESVGENVTGLKEGDVVIPTYLGECGECENCRSPKTNVCLKHPVTFTGLMP 112

Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 143
           D TSRMS+RGQ+L+HIFSCSTW+EYMV++ANY+VK+DP I PSDASFLSCGF+TGYGAAW
Sbjct: 113 DGTSRMSIRGQRLHHIFSCSTWTEYMVVNANYLVKIDPRIAPSDASFLSCGFSTGYGAAW 172

Query: 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
           K+AKVEKGSSVAVLGLG VGLG + GAR  GAA+IIGIDKN  ++E G+AFGMTDFINP 
Sbjct: 173 KDAKVEKGSSVAVLGLGAVGLGVLQGARNQGAARIIGIDKNERRREVGEAFGMTDFINP- 231

Query: 204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 263
           +E NKSISELV  +T G GVDY FECTG+PSL++EAL+ TKVGKG  +V+G+     V +
Sbjct: 232 NESNKSISELVNELTGGQGVDYSFECTGIPSLVNEALQATKVGKGMSMVLGIANVPTVDI 291

Query: 264 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK----EFKLHQLLTHHVKLEEIDKA 319
           +++AL   G+TLKG  FGGIK +SD+P ++DKC NK    + +L +LLTH V+LE+++KA
Sbjct: 292 SLMAL-LSGKTLKGCFFGGIKVQSDIPVIVDKCINKASSLDIQLDELLTHEVQLEDMNKA 350

Query: 320 IQLLKQPDCVK 330
            +LLKQPDCVK
Sbjct: 351 FELLKQPDCVK 361

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144873|ref|XP_002325446.1| predicted protein [Populus trichocarpa] gi|222862321|gb|EEE99827.1| predicted protein [Populus trichocarpa]

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/304 (66%), Positives = 246/304 (80%), Gaps = 2/304 (0%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           +VES GDEV  ++EGD VIPT I EC+ CENCTS  TNLCL YP++ +GLMLD TSRMS+
Sbjct: 77  MVESFGDEVNGLEEGDYVIPTMIAECEACENCTSANTNLCLTYPLSRSGLMLDGTSRMSI 136

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
            GQKLYH+F+CSTWSEYMVID+NYV K+DPSI    AS LSCGF+TG+GAAWKEA+V+ G
Sbjct: 137 NGQKLYHMFTCSTWSEYMVIDSNYVNKIDPSIPLPHASVLSCGFSTGFGAAWKEAQVKMG 196

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
           S+VAVLGLG VGLG  +GARM GAAKIIG+DKN  KK+KG AFGMTDFINPD+  +KSIS
Sbjct: 197 STVAVLGLGAVGLGVTEGARMLGAAKIIGVDKNSMKKDKGLAFGMTDFINPDECSDKSIS 256

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 271
           +++K +T GMGVDYCFEC G  SL+++A++ TK GKGK IVIG G+ + V ++ + L   
Sbjct: 257 QMIKDLTGGMGVDYCFECVGAESLINQAIQATKEGKGKTIVIGGGISS-VKIDYLPLL-S 314

Query: 272 GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKV 331
           GRTLKG+ FGG+K KSDLP L  KCKNKEF L +LLTH V L++I+KA +LL QPDCVKV
Sbjct: 315 GRTLKGSLFGGLKVKSDLPILFQKCKNKEFDLDELLTHEVTLQDIEKAFELLNQPDCVKV 374

Query: 332 LITI 335
           LI I
Sbjct: 375 LIKI 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357487763|ref|XP_003614169.1| Alcohol dehydrogenase class-3 [Medicago truncatula] gi|355515504|gb|AES97127.1| Alcohol dehydrogenase class-3 [Medicago truncatula]

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/304 (63%), Positives = 247/304 (81%), Gaps = 2/304 (0%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           V+ES GDEV  +KEGDI+IPTY+GEC+EC NC S  TNLCL YP+   GLM D+TSR+SV
Sbjct: 73  VIESVGDEVTNMKEGDIIIPTYVGECQECVNCVSRKTNLCLTYPVRFTGLMPDNTSRLSV 132

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
           RGQ+LYH+ SC+TWSEY+V+D NY++KVDP+I+ + ASF+SCGF+TGYGAAWKEAKV+ G
Sbjct: 133 RGQRLYHVLSCATWSEYVVVDVNYLLKVDPTINLAYASFISCGFSTGYGAAWKEAKVKSG 192

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
           SSVAV GLG VGLG + GA+M GA+KIIG+DKN  K+EKG+AFGMT FINP     KS S
Sbjct: 193 SSVAVFGLGAVGLGVIGGAKMMGASKIIGVDKNEMKREKGEAFGMTHFINPSGS-YKSAS 251

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 271
           +LVK ++ GMGVDY FECTGVPSLL+ ++E TK+G GK I IG GV+ +VP ++IA+   
Sbjct: 252 DLVKELSGGMGVDYSFECTGVPSLLNVSVEATKLGTGKTIAIGSGVENIVPFDLIAILF- 310

Query: 272 GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKV 331
           GRTLKG+ FGG+KT SDLP + DKC+N+EF L +L TH V L +I+KA +++KQP+CVKV
Sbjct: 311 GRTLKGSVFGGLKTASDLPIIADKCQNEEFPLQELFTHEVPLADINKAFEIMKQPNCVKV 370

Query: 332 LITI 335
           +I +
Sbjct: 371 VIKM 374

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
TAIR|locus:2157627	390	AT5G42250 [Arabidopsis thalian	0.898	0.771	0.385	6.1e-55
TAIR|locus:2009512	386	AT1G22440 [Arabidopsis thalian	0.895	0.777	0.388	3e-53
TAIR|locus:2120663	389	AT4G22110 [Arabidopsis thalian	0.967	0.832	0.380	1.3e-52
TAIR|locus:2009522	388	AT1G22430 [Arabidopsis thalian	0.895	0.773	0.388	1.5e-51
TAIR|locus:2035619	394	AT1G32780 [Arabidopsis thalian	0.946	0.804	0.374	4e-51
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.943	0.829	0.355	6.5e-51
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.940	0.831	0.337	3.8e-46
UNIPROTKB|F1S0Z0	391	ADH7 "Uncharacterized protein"	0.925	0.792	0.354	1.3e-45
UNIPROTKB|I3LFH9	374	ADH7 "Uncharacterized protein"	0.925	0.828	0.354	1.3e-45
UNIPROTKB|J9P795	379	ADH4 "Uncharacterized protein"	0.943	0.833	0.341	1.6e-45

TAIR|locus:2157627 AT5G42250 [Arabidopsis thaliana (taxid:3702)]

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 118/306 (38%), Positives = 177/306 (57%)

Query:    32 VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM--LDSTSRM 89
             VVES G+ VKEV EGD V+PT++ +C +C +C S  +NLC K+P  ++  M   D++SR 
Sbjct:    83 VVESVGENVKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSPWMPRYDNSSRF 142

Query:    90 S-VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
             + + G+ L+H  + S++SEY V+D   VVK+D SI PS A  LSCG +TG GAAW+ AKV
Sbjct:   143 TDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGVSTGVGAAWETAKV 202

Query:   149 EKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
             EK                    R+ GA++IIG+D NP K + G+ FG+T+F+N       
Sbjct:   203 EKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVTEFVNSMTCEKN 262

Query:   209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD-AMVPLNVIA 267
              +SE++  +T G G DYCFEC G  SL+ EA                    + + L+   
Sbjct:   263 RVSEVINEMTDG-GADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDKPGSQICLDSFD 321

Query:   268 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
             +   G+ L G+ FGG+K K+ +P LL +  + E +L + +TH +K EEI+ A QLL +  
Sbjct:   322 VLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEINDAFQLLLEGK 381

Query:   328 CVKVLI 333
             C++ ++
Sbjct:   382 CIRCVL 387

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2009512 AT1G22440 [Arabidopsis thaliana (taxid:3702)]

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 119/306 (38%), Positives = 173/306 (56%)

Query:    32 VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP--IALNGLMLDSTSRM 89
             VVES G++V   K+GD+V+P +  +C+EC+ C S  +N C KY      N      TSR 
Sbjct:    79 VVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYLSNTRRYGMTSRF 138

Query:    90 S-VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
                RG+ ++H    S+++EY V+D  ++VK+ P I    A+ LSC   TG GAAWK A V
Sbjct:   139 KDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVATGLGAAWKVADV 198

Query:   149 EKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
             E+                    R+ GAAKIIG+D NP K E GK FG+TDF+NP     K
Sbjct:   199 EEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFGITDFVNPALCGEK 258

Query:   209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIAL 268
             +ISE+++ +T  +G DY FEC G+ SL+ EA ++T               A+ P+++ + 
Sbjct:   259 TISEVIREMTD-VGADYSFECIGLASLMEEAFKSTRPGSGKTIVLGMEQKAL-PISLGSY 316

Query:   269 -ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
                 GRT+ GT FGG+K K D+P L+D+   KE  L  L+TH +  EEI+KA  LL + +
Sbjct:   317 DLLRGRTVCGTLFGGLKPKLDIPILVDRYLKKELNLEDLITHELSFEEINKAFHLLAEGN 376

Query:   328 CVKVLI 333
              ++ +I
Sbjct:   377 SIRCII 382

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010359 "regulation of anion channel activity" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2120663 AT4G22110 [Arabidopsis thaliana (taxid:3702)]

 Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
 Identities = 127/334 (38%), Positives = 178/334 (53%)

Query:     6 TLISFALKDSQRL--FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENC 63
             T +SF+  DS  L  F  +  G +  G V+ES G+ V   ++GD+V+P +   C+EC +C
Sbjct:    56 TDVSFSKIDSGPLARFPRIL-GHEAVG-VIESIGEHVNGFQQGDVVLPVFHPHCEECRDC 113

Query:    64 TSEMTNLCLKYP--IALNGLMLDSTSRMSVR-GQKLYHIFSCSTWSEYMVIDANYVVKVD 120
              S  +N C ++      N      TSR     G+ +YH    S++SEY V+D  ++VK+ 
Sbjct:   114 KSSKSNWCARFADDFLSNTRRYGMTSRFKDSFGEDIYHFLFVSSFSEYTVVDIAHLVKIS 173

Query:   121 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIG 180
             P I    A+ LSCG +TG GAAWK A VEK                    R+ GA KIIG
Sbjct:   174 PDIPVDKAALLSCGVSTGIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIG 233

Query:   181 IDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 240
             +D NP K E GK FG TDFIN        ISE++K +T G GVDY FEC G+PSLL+EA 
Sbjct:   234 VDLNPEKFELGKKFGFTDFINSTLCGENKISEVIKEMTGG-GVDYSFECVGLPSLLTEAF 292

Query:   241 ETTXXXXXXXXXXXXXXDAMVPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 299
              +T                + P+++ +     GR + G+ FGG+K K D+P L+D    K
Sbjct:   293 SSTRTGSGKTVVLGIDKH-LTPVSLGSFDLLRGRHVCGSLFGGLKPKLDIPILVDHYLKK 351

Query:   300 EFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 333
             E  L   +TH +K EEI+KA  LL Q   ++ ++
Sbjct:   352 ELNLDSFITHELKFEEINKAFDLLVQGKSLRCIL 385

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2009522 AT1G22430 [Arabidopsis thaliana (taxid:3702)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 119/306 (38%), Positives = 167/306 (54%)

Query:    32 VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP--IALNGLMLDSTSRM 89
             VVES G+ V   K+GD+V+P +   C+EC++C S  TN C +Y      N       SR 
Sbjct:    81 VVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGMASRF 140

Query:    90 S-VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
                 G+ ++H    S++SEY V+D  ++VK+ P I    A+ LSCG +TG GAAWK A V
Sbjct:   141 KDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTGIGAAWKVANV 200

Query:   149 EKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
             E+                    R+ GAAKIIGID N  K E GK FG TDFINP     K
Sbjct:   201 EEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGFTDFINPTLCGEK 260

Query:   209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIAL 268
              ISE++K +T G GVDY FEC G+ SLL+EA  +T               A  P+++ + 
Sbjct:   261 KISEVIKEMTEG-GVDYSFECVGLASLLNEAFISTRTGTGKTVMLGMEKHA-APISLGSF 318

Query:   269 -ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
                 GR + G+ FGG+K+K D+P L+D    KE  L   +TH +  +EI+KA  LL++  
Sbjct:   319 DLLRGRVICGSLFGGLKSKLDIPILVDHYLKKELNLDSFITHELNFKEINKAFALLEEGK 378

Query:   328 CVKVLI 333
              ++ ++
Sbjct:   379 SLRCIL 384

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2035619 AT1G32780 [Arabidopsis thaliana (taxid:3702)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 125/334 (37%), Positives = 180/334 (53%)

Query:    14 DSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLK 73
             +++R F  +  G +  G +VES G+ VK+VKEGD VIPT+ GEC EC+ C  E +NLC +
Sbjct:    60 EAERAFPRIL-GHEAVG-IVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCER 117

Query:    74 YPI-ALNGLML-DSTSRMSV---------RGQKLYHIFSCSTWSEYMVIDANYVVKVDPS 122
             Y +  +  +M+ D  +R S          + Q +YH  + ST++EY V+D+  VVK+DP+
Sbjct:   118 YHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPN 177

Query:   123 IDPSDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGID 182
                   S LSCG +TG GAAW  A V++                    R  GA++IIG+D
Sbjct:   178 SPLKQMSLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVD 237

Query:   183 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA-LE 241
              N  K EKGK  G+TDFINP D   K + ++++ IT G GVDY FECTG   +L EA L 
Sbjct:   238 ANASKFEKGKLMGVTDFINPKDL-TKPVHQMIREITGG-GVDYSFECTGNVDVLREAFLS 295

Query:   242 TTXXXXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF 301
             T                  +PL+ + L   GR + G+ FGG K KS LP    +C     
Sbjct:   296 THVGWGSTVLVGIYPTPRTLPLHPMELF-DGRRITGSVFGGFKPKSQLPNFAQQCMKGVV 354

Query:   302 KLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 335
             KL   +T+ +  E+I+ A QLL+    ++ ++ I
Sbjct:   355 KLEPFITNELPFEKINDAFQLLRDGKSLRCILQI 388

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 114/321 (35%), Positives = 176/321 (54%)

Query:    14 DSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLK 73
             +SQ L   +F G + +G +VES G+ V E ++GD V+  + GEC  C +C S  +N+C  
Sbjct:    61 ESQSLLPRIF-GHEAAG-IVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQV 118

Query:    74 YPIALNGLM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLS 132
               +   GLM  D  +R S++G+ +YH  + S++SEY V+ +   VKVDP         LS
Sbjct:   119 LGMERKGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLS 178

Query:   133 CGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGK 192
             CG   G GAAW  A V+K                    ++ GAA+I+G+D NP K E+ K
Sbjct:   179 CGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAK 238

Query:   193 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXX 252
              FG+TDFIN +D  ++ I +++K +T G G D+ FEC G   + + AL++          
Sbjct:   239 TFGVTDFINSNDL-SEPIPQVIKRMTGG-GADFSFECVGDTGIATTALQSCSDGWGMTVT 296

Query:   253 XXXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK 312
                            L   G++LKGT FGG K KSDLP+L+DK  NKE  + + +TH++ 
Sbjct:   297 LGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLS 356

Query:   313 LEEIDKAIQLLKQPDCVKVLI 333
              +EI+KA  L+++  C++ ++
Sbjct:   357 FDEINKAFVLMREGKCLRCVL 377

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 111/329 (33%), Positives = 172/329 (52%)

Query:    13 KDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC- 71
             K    LF  +F G +  G +VES G+ V +++ GD V+P + GEC EC +C SE +N+C 
Sbjct:    57 KGQTPLFPRIF-GHEAGG-IVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCD 114

Query:    72 -LKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF 130
              L+      G++ D  SR S+ G+ +YH    ST+SEY V+ +  V K++P         
Sbjct:   115 LLRINTERGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCI 174

Query:   131 LSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEK 190
             +SCG +TG GA    AK +K                    R+ GA++IIG+D N  + ++
Sbjct:   175 VSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQ 234

Query:   191 GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXX 250
              K FG+T+ +NP D  +K I +++  +T G GVD   ECTG    + +A E         
Sbjct:   235 AKEFGVTECVNPKDH-DKPIQQVIAEMTDG-GVDRSVECTGSVQAMIQAFECVHDGWGVA 292

Query:   251 XXXX--XXXDAMV--PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQL 306
                      DA    P+N +      RTLKGT FG  K K+D+P +++K  NKE +L + 
Sbjct:   293 VLVGVPSKDDAFKTHPMNFL----NERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKF 348

Query:   307 LTHHVKLEEIDKAIQLLKQPDCVKVLITI 335
             +TH V   EI+KA   + + + ++ +IT+
Sbjct:   349 ITHTVPFSEINKAFDYMLKGESIRCIITM 377

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

UNIPROTKB|F1S0Z0 ADH7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 111/313 (35%), Positives = 163/313 (52%)

Query:    22 VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 81
             V  G + +G VVES GD V  VK GD VIP ++ +C+EC  C +   NLC++  I   G+
Sbjct:    81 VIVGHEATG-VVESIGDGVTTVKPGDKVIPLFLPQCRECSFCRNPDGNLCVRSDITGRGV 139

Query:    82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 141
             + D T+R + +GQ +YH  + ST++EY V+D   V K+D +  P     + CGF+TGYGA
Sbjct:   140 LADGTTRFTCKGQPVYHFMNTSTYTEYTVVDETSVAKIDDAAPPEKVCLIGCGFSTGYGA 199

Query:   142 AWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 201
             A K  KV                      ++ GA++IIGID N  K EK  A G T+ I+
Sbjct:   200 AVKTGKVTPGSTCVVFGLGRSGLSVIMGCKLAGASRIIGIDLNKDKFEKAMAVGATECIS 259

Query:   202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMV 261
             P D P K ISE++  +T G  V Y FE  G    + +AL +                A +
Sbjct:   260 PKDSP-KPISEVLSEMT-GDTVGYSFEVIGRLETMIDALASCNMNYGVSVVVGAPPSAKM 317

Query:   262 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321
                   L   GRT KG  FGG K++ D+P L+     K+F L QL+TH +  ++I++  +
Sbjct:   318 LTYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTDFLAKKFDLDQLITHILPFKQINEGFE 377

Query:   322 LLKQPDCVKVLIT 334
             LL     ++ ++T
Sbjct:   378 LLYSGQSIRTVLT 390

GO:0048019 "receptor antagonist activity" evidence=IEA

GO:0045471 "response to ethanol" evidence=IEA

GO:0042573 "retinoic acid metabolic process" evidence=IEA

GO:0042572 "retinol metabolic process" evidence=IEA

GO:0010430 "fatty acid omega-oxidation" evidence=IEA

GO:0009617 "response to bacterium" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0004745 "retinol dehydrogenase activity" evidence=IEA

GO:0004031 "aldehyde oxidase activity" evidence=IEA

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|I3LFH9 ADH7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 111/313 (35%), Positives = 163/313 (52%)

Query:    22 VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 81
             V  G + +G VVES GD V  VK GD VIP ++ +C+EC  C +   NLC++  I   G+
Sbjct:    64 VIVGHEATG-VVESIGDGVTTVKPGDKVIPLFLPQCRECSFCRNPDGNLCVRSDITGRGV 122

Query:    82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 141
             + D T+R + +GQ +YH  + ST++EY V+D   V K+D +  P     + CGF+TGYGA
Sbjct:   123 LADGTTRFTCKGQPVYHFMNTSTYTEYTVVDETSVAKIDDAAPPEKVCLIGCGFSTGYGA 182

Query:   142 AWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 201
             A K  KV                      ++ GA++IIGID N  K EK  A G T+ I+
Sbjct:   183 AVKTGKVTPGSTCVVFGLGRSGLSVIMGCKLAGASRIIGIDLNKDKFEKAMAVGATECIS 242

Query:   202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMV 261
             P D P K ISE++  +T G  V Y FE  G    + +AL +                A +
Sbjct:   243 PKDSP-KPISEVLSEMT-GDTVGYSFEVIGRLETMIDALASCNMNYGVSVVVGAPPSAKM 300

Query:   262 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321
                   L   GRT KG  FGG K++ D+P L+     K+F L QL+TH +  ++I++  +
Sbjct:   301 LTYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTDFLAKKFDLDQLITHILPFKQINEGFE 360

Query:   322 LLKQPDCVKVLIT 334
             LL     ++ ++T
Sbjct:   361 LLYSGQSIRTVLT 373

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|J9P795 ADH4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 112/328 (34%), Positives = 177/328 (53%)

Query:    13 KDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC- 71
             K  + LF ++  G + +G +VES G  V   K GD VIP Y+  C++C+ C + +TNLC 
Sbjct:    57 KFKEALFPVIL-GHEGAG-IVESVGPGVTNFKPGDKVIPLYMPHCRKCKFCLNPLTNLCK 114

Query:    72 ----LKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD 127
                 +K PI    LM D TSR + +G+ +YH    ST+++Y V+    + K+D  ++   
Sbjct:   115 KLSLVKNPIVDQELMEDKTSRFTCKGKPIYHFMGTSTFTQYTVVSDINLAKIDDDVNLER 174

Query:   128 ASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWK 187
             A    CGF+TGYGAA   AKV                      ++ GA++II ID N  K
Sbjct:   175 ACLFGCGFSTGYGAAINTAKVTPGSTCAVFGLGGVGLSTIMGCKVAGASRIIAIDINNEK 234

Query:   188 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXX 247
               K KA G+T+ +NP D  NK I E++  +T+G GVD+ F+C G P  +  AL+ T    
Sbjct:   235 FTKAKALGITECLNPRDF-NKPIQEVIIEMTNG-GVDFAFDCAGGPEAMRAALDCTTVGW 292

Query:   248 XXXXXXXXXXD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQL 306
                       + + + ++ + L  G RT+ GT FGG K+ S +P L+   KNK+F L  L
Sbjct:   293 GSCTLIGVNSEMSRLTISPVELIMG-RTINGTCFGGWKSDS-IPKLVTDYKNKKFDLDLL 350

Query:   307 LTHHVKLEEIDKAIQLLKQPDCVKVLIT 334
             +TH +  ++I++A  ++ Q   +++++T
Sbjct:   351 VTHTLPFDKINEAFDIMNQGKSLRIVLT 378

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9QYY9	ADH4_MOUSE	1, ., 1, ., 1, ., 1	0.3926	0.9343	0.8302	yes	no
Q64563	ADH4_RAT	1, ., 1, ., 1, ., 1	0.3969	0.9373	0.8328	yes	no
P32771	FADH_YEAST	1, ., 1, ., 1, ., -	0.3993	0.9343	0.8108	yes	no
P08319	ADH4_HUMAN	1, ., 1, ., 1, ., 1	0.4067	0.9283	0.8184	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XVIII1194 hypothetical protein (377 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	335
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-143
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	1e-117
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-100
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	2e-94
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	3e-91
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-88
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	2e-85
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	7e-84
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	3e-83
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	5e-80
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	1e-58
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	1e-58
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	3e-54
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	1e-50
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-44
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	5e-42
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-39
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	2e-39
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	1e-37
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	1e-37
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	2e-37
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-36
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	2e-35
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	5e-35
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	1e-34
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	7e-34
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	1e-31
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	1e-31
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-31
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	1e-28
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	4e-28
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	5e-27
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	5e-25
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	7e-25
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	2e-24
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	3e-24
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	4e-24
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	4e-24
cd05281	341	cd05281, TDH, Threonine dehydrogenase	7e-24
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	5e-23
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	8e-23
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	6e-22
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	2e-21
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	3e-21
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	6e-21
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-19
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-19
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	5e-19
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-18
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	4e-18
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-17
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	2e-17
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	1e-16
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	1e-16
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	6e-16
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-15
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	5e-15
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	9e-15
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-14
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	2e-13
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	8e-13
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	2e-12
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	5e-12
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	2e-11
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	7e-11
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	1e-10
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-10
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	6e-10
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	8e-10
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	9e-10
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	3e-09
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	6e-09
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	1e-08
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	2e-08
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	4e-08
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	9e-08
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	8e-07
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	9e-07
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	1e-05
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	3e-05
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	8e-05
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	2e-04
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-04
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	5e-04
smart00829	287	smart00829, PKS_ER, Enoylreductase	7e-04
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	0.001
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	0.002
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	0.003
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	0.004

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  408 bits (1051), Expect = e-143
 Identities = 155/303 (51%), Positives = 206/303 (67%), Gaps = 3/303 (0%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           +VES G+ V  +K GD VIP +IG+C EC NC S  TNLC KY    +GLM D TSR + 
Sbjct: 66  IVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTC 125

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
           +G+K+YH    ST+S+Y V+D NYV K+DP+        L CGF+TGYGAAW  AKVE G
Sbjct: 126 KGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPG 185

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
           S+VAV GLG VGL A+ GA++ GA++IIG+D N  K EK K FG TDFINP D   K +S
Sbjct: 186 STVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSD-KPVS 244

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG 271
           E+++ +T G GVDY FECTG   L++EALE+TK+G G  +V+GV   A + +    L   
Sbjct: 245 EVIREMT-GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL- 302

Query: 272 GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKV 331
           GRT KG+ FGG K++SD+P L+ K  NK+F L +L+TH +  EEI+K   L+K  +C++ 
Sbjct: 303 GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRT 362

Query: 332 LIT 334
           +IT
Sbjct: 363 VIT 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  342 bits (880), Expect = e-117
 Identities = 141/326 (43%), Positives = 201/326 (61%), Gaps = 8/326 (2%)

Query: 12  LKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC 71
            K    LF  +  G + +G +VES G+ V ++K GD V+P + GECKEC +C SE +N+C
Sbjct: 49  AKGQTPLFPRIL-GHEAAG-IVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMC 106

Query: 72  LKYPI-ALNGLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDAS 129
               I    G+M+ D  SR S+ G+ +YH    ST+SEY V+    V K++P        
Sbjct: 107 DLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVC 166

Query: 130 FLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE 189
            LSCG +TG GAAW  AKV+KGS+VA+ GLG VGL   +GAR+ GA++IIG+D NP K E
Sbjct: 167 LLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFE 226

Query: 190 KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGK 249
           + K FG+T+F+NP D  +K + E++  +T G GVDY FECTG    +  A E    G G 
Sbjct: 227 QAKKFGVTEFVNPKDH-DKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGV 284

Query: 250 VIVIGV-GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLT 308
            +++GV   DA+   + + L   GRTLKGT FGG K K+DLP L++K   KE +L + +T
Sbjct: 285 TVLLGVPHKDAVFSTHPMNL-LNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFIT 343

Query: 309 HHVKLEEIDKAIQLLKQPDCVKVLIT 334
           H +   EI+KA  LL + +C++ ++ 
Sbjct: 344 HELPFSEINKAFDLLLKGECLRCILH 369

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  298 bits (766), Expect = e-100
 Identities = 131/308 (42%), Positives = 177/308 (57%), Gaps = 11/308 (3%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMS 90
           +VES G+ V  VK GD VIP Y  EC EC+ C S  TNLC K       GLM D TSR S
Sbjct: 67  IVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFS 126

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            +G+ +YH    ST+SEY V+    V K++P         L CG TTGYGA    AKVE 
Sbjct: 127 CKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEP 186

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           GS+VAV GLG VGL  + GA+  GA++IIGID NP K E  K FG TD +NP D   K I
Sbjct: 187 GSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHD-KPI 245

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV---GVD-AMVPLNVI 266
            +++  +T G GVDY FEC G   ++  ALE    G G  ++IGV   G + +  P  ++
Sbjct: 246 QQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV 304

Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 326
                GR  KGT FGG K++S +P L++     + K+ + +TH + L+EI++A  L+   
Sbjct: 305 T----GRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAG 360

Query: 327 DCVKVLIT 334
             ++ ++ 
Sbjct: 361 KSIRTVVK 368

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  284 bits (729), Expect = 2e-94
 Identities = 122/306 (39%), Positives = 170/306 (55%), Gaps = 7/306 (2%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLK-YPIALNGLMLDSTSRMS 90
           +VE+ G+ V  VK GD VI  +  EC +C+ C S   NLC         G M D T+R+S
Sbjct: 66  IVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS 125

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
             G  +YH   CST++EY V+    +VK+DP      A  L CG TTG GA    AKVE 
Sbjct: 126 GNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEP 185

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           G +VAV GLG VGL A+ GA+  GA +II +D NP K E  K FG T F+NP +  +  +
Sbjct: 186 GDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDD--V 243

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVIALA 269
            E +  +T G G DY FEC G   ++ +ALE T  G G  ++IGV G    +      L 
Sbjct: 244 VEAIVELTDG-GADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLV 301

Query: 270 CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV 329
             GR  KG+ FGG + +SD+P L+D     +  L +L+TH + LE+I++A  L+ +   +
Sbjct: 302 -TGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI 360

Query: 330 KVLITI 335
           + +I  
Sbjct: 361 RSVIRF 366

Length = 366

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  277 bits (709), Expect = 3e-91
 Identities = 134/309 (43%), Positives = 190/309 (61%), Gaps = 8/309 (2%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI-ALNGLML-DSTSRM 89
           +VES G+ V+++K GD VIP + GEC +C  C  + TNLC  Y +     +M+ D  +R 
Sbjct: 76  IVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRF 135

Query: 90  SVR--GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK 147
           S +  GQ +YH  + ST++EY V+D+  VVK+DP+      S LSCG +TG GAAW  A 
Sbjct: 136 STKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTAN 195

Query: 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 207
           V+ GSSVA+ GLG VGL   +GAR  GA+KIIG+D NP K EKGK  G+TDFINP D  +
Sbjct: 196 VQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDS-D 254

Query: 208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVI 266
           K + E ++ +T G GVDY FEC G   +L EA  +T  G G  +++G+     M+PL+ +
Sbjct: 255 KPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPM 313

Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 326
            L   GR++ G+ FG  K KS LP L  +C      L   +TH +  E+I++A QLL+  
Sbjct: 314 ELF-DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDG 372

Query: 327 DCVKVLITI 335
             ++ L+ +
Sbjct: 373 KALRCLLHL 381

Length = 381

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  270 bits (691), Expect = 1e-88
 Identities = 137/321 (42%), Positives = 198/321 (61%), Gaps = 5/321 (1%)

Query: 14  DSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLK 73
           +SQ LF  +F G + SG +VES G+ V E ++GD V+  + GEC  C +C S  +N+C  
Sbjct: 58  ESQALFPRIF-GHEASG-IVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQV 115

Query: 74  YPIALNGLM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLS 132
             +   G+M  D  +R S++G+ +YH  + S++SEY V+ +   VKVDP         LS
Sbjct: 116 LGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLS 175

Query: 133 CGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK 192
           CG   G GAAW  A V KGSSV + GLGTVGL    GA++ GA++IIG+D NP K EK K
Sbjct: 176 CGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK 235

Query: 193 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV 252
            FG+TDFINP+D  ++ I +++K +T G G DY FEC G   + + AL++   G G  + 
Sbjct: 236 TFGVTDFINPND-LSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVT 293

Query: 253 IGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK 312
           +GV            L   GRTLKG+ FGG K KSDLP+L+DK  NKE  + + +TH++ 
Sbjct: 294 LGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLS 353

Query: 313 LEEIDKAIQLLKQPDCVKVLI 333
            +EI+KA +L+++  C++ +I
Sbjct: 354 FDEINKAFELMREGKCLRCVI 374

Length = 378

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  261 bits (670), Expect = 2e-85
 Identities = 120/305 (39%), Positives = 174/305 (57%), Gaps = 5/305 (1%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLMLDSTSRMS 90
           +VES G+ V  VK GD VIP ++ +C +C  C +  +NLCLK  +    GLM D TSR +
Sbjct: 71  IVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFT 130

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            +G+ ++H    ST+SEY V+D   V K+D +        + CGF+TGYGAA   AKV  
Sbjct: 131 CKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTP 190

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           GS+ AV GLG VGL A+ G +  GA++II +D N  K  K K  G T+ INP D   K I
Sbjct: 191 GSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDY-KKPI 249

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-MVPLNVIALA 269
            E++  +T G GVD+ FE  G    +  AL +   G G  +++GV   +  + +N + L 
Sbjct: 250 QEVLTEMTDG-GVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLL 308

Query: 270 CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV 329
             GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   LL+    +
Sbjct: 309 T-GRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSI 367

Query: 330 KVLIT 334
           + ++T
Sbjct: 368 RTVLT 372

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  257 bits (659), Expect = 7e-84
 Identities = 106/304 (34%), Positives = 158/304 (51%), Gaps = 5/304 (1%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VVE  G  V  VK GD V+ ++I  C  C  C+    NLC      L G + D T R + 
Sbjct: 64  VVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTA 123

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
            G+ +  +    T++EY V+    VVK+D  I    A+ L CG TTG GA    A+V  G
Sbjct: 124 DGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPG 183

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
            +VAV+G G VGL A+ GAR+ GA++II +D  P K E  + FG T  +N  ++      
Sbjct: 184 DTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED---DAV 240

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG-VDAMVPLNVIALAC 270
           E V+ +T G G DY FE  G  + + +AL  T+ G G  +V+G+G     V L  + L  
Sbjct: 241 EAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFL 299

Query: 271 GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVK 330
             + L+G+ +G    + D+P LLD  +    KL +L+T    L+EI++A   +   +  +
Sbjct: 300 SEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENAR 359

Query: 331 VLIT 334
            +I 
Sbjct: 360 GVIV 363

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  256 bits (655), Expect = 3e-83
 Identities = 121/305 (39%), Positives = 175/305 (57%), Gaps = 5/305 (1%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-PIALNGLMLDSTSRMS 90
           +VES G  V  +K GD VIP +  +C +C+ C +   NLC K       GLM D TSR +
Sbjct: 64  IVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFT 123

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            +G+ ++H    ST++EY V+    + K+DP         + CGF+TGYGAA   AKV  
Sbjct: 124 CKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTP 183

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           GS+ AV GLG VGL  + G +  GA++II +D N  K EK K  G T+ INP D  +K I
Sbjct: 184 GSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD-QDKPI 242

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA-MVPLNVIALA 269
            E++  +T G GVDY FE  G    L +AL+ T++G G  +V+GV        L+   L 
Sbjct: 243 VEVLTEMTDG-GVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLL 301

Query: 270 CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV 329
             GRT+KGT FGG K+K  +P L+   + K+F L +L+TH +  EEI+    L++  + +
Sbjct: 302 -TGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI 360

Query: 330 KVLIT 334
           + ++T
Sbjct: 361 RTILT 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  247 bits (633), Expect = 5e-80
 Identities = 128/307 (41%), Positives = 178/307 (57%), Gaps = 5/307 (1%)

Query: 30  GKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-PIALNGLMLDSTSR 88
             +VE+ G+ V  VK GD VIP Y  EC EC+ C S  TNLC+        GLM D TSR
Sbjct: 64  AGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSR 123

Query: 89  MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
            S  GQ +YH   CST+SEY V+    + K++P+    +   L CG TTG GA    AKV
Sbjct: 124 FSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKV 183

Query: 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
           E+G +VAV GLG +GL  + GARM  A++II ID NP K E  K  G TD +NP+D  +K
Sbjct: 184 EEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY-DK 242

Query: 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVIA 267
            I E++  IT G GVDY FEC G  +++  ALE    G G+ I+IGV G    +      
Sbjct: 243 PIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQ 301

Query: 268 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
           L   GR  +G+ FGG+K +++LP ++++    E  L   +TH + LE+I++A  L+ +  
Sbjct: 302 LVT-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGK 360

Query: 328 CVKVLIT 334
            ++ +I 
Sbjct: 361 SIRTVIH 367

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  192 bits (491), Expect = 1e-58
 Identities = 98/307 (31%), Positives = 153/307 (49%), Gaps = 12/307 (3%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-PIALNGLMLDSTSRMS 90
           VVE+ G  V  +K GD V+ ++   C EC NC S     C  + P+  +G   D ++ +S
Sbjct: 66  VVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLS 124

Query: 91  VRGQK--LYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
           +        H F  S+++ Y V+    VVKVD  +     + L CG  TG GA     K 
Sbjct: 125 LDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKP 184

Query: 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
             GSS+AV G G VGL AV  A++ G   II +D    + E  K  G T  INP +E   
Sbjct: 185 RPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEE--- 241

Query: 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG-VDAMVPLNVIA 267
            +   ++ IT G GVDY  + TGVP+++ +A++      G + ++G     A V L+V  
Sbjct: 242 DLVAAIREITGG-GVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVND 299

Query: 268 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
           L   G+T++G   G    +  +P L++  +  +F   +L+T +   E+I++AI   +   
Sbjct: 300 LLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFY-PFEDINQAIADSESGK 358

Query: 328 CVK-VLI 333
            +K VL 
Sbjct: 359 VIKPVLR 365

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  192 bits (490), Expect = 1e-58
 Identities = 102/295 (34%), Positives = 153/295 (51%), Gaps = 10/295 (3%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML-DSTSRMS 90
           VV   G  V  VK GD V+ ++I  C  C  C++ + NLC      L G  + D T R  
Sbjct: 66  VVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFH 125

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
             GQ +  +    T+SEY V+    VVK+D  I    A  + CG  TG+G+A   A V  
Sbjct: 126 ADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIADVRP 185

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           G +V V+G+G VG+ AV GA + GA K+I +D   +K+E+   FG T      +E  + +
Sbjct: 186 GDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAFASMEEAVQLV 245

Query: 211 SELVKGITHGMGVDYCFECTGV--PSLLSEALETTKVGKGKVIVIGVG--VDAMVPLNVI 266
            EL    T+G G D      G      ++EAL  T+ G G+V+V G+G   D  V +N+ 
Sbjct: 246 REL----TNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMADVDVKVNLF 300

Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321
            L    + L+GT FGG   ++D+P LL+  +  + KL +L+T    L++I++  Q
Sbjct: 301 ELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYTLDQINEGYQ 355

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  181 bits (461), Expect = 3e-54
 Identities = 98/306 (32%), Positives = 149/306 (48%), Gaps = 11/306 (3%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA---LNGLMLDSTSR 88
           VV   G+ V +++ GD V+  ++  C  C  C      LC   P A     G +L    R
Sbjct: 72  VVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALC--EPGAAANGAGTLLSGGRR 129

Query: 89  MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
           + +RG ++ H    S ++EY V+    VVK+D  +    A+   C   TG GA    A V
Sbjct: 130 LRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGV 189

Query: 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
             G SVAV+GLG VGL A+ GA   GA++++ +D N  K    +  G T  +N  D    
Sbjct: 190 RPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDP--- 246

Query: 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVIA 267
           +  E V+ +T G GVDY FE  G    L  A E T+ G G  +  G+   +A + +  ++
Sbjct: 247 NAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALS 304

Query: 268 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
           L    RTLKG+  G    + D+P  L    +    + +LLTH + L+EI++    L   +
Sbjct: 305 LVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGE 364

Query: 328 CVKVLI 333
            V+ +I
Sbjct: 365 AVRQVI 370

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  171 bits (436), Expect = 1e-50
 Identities = 94/308 (30%), Positives = 149/308 (48%), Gaps = 15/308 (4%)

Query: 25  GTKVSGKVVESAGDEVK---EVKEGDIVIPTYIGECKECENCTSEMTNLC---LKYPIAL 78
           G ++SG+VVE  G  V+    +  GD V+ ++I  C +C  C     NLC     Y    
Sbjct: 58  GHEISGEVVE-VGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLK 116

Query: 79  NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 138
             L  D T+R+        +++S    +EY V+ A  +  +  S+D ++++ L C   T 
Sbjct: 117 GTL-YDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTA 175

Query: 139 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 198
           YGA    A V  G +VAV+G+G VG  A+  A+  GA+ II +D    K  K K  G T 
Sbjct: 176 YGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATH 235

Query: 199 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG-V 257
            +N   E        ++ IT G GVD   E  G P     AL+  + G G+ +V+G+   
Sbjct: 236 TVNAAKE---DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPG 291

Query: 258 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317
            A   + +  L   G  + G ++G  + + DLP L+    + +     L+TH  KLEEI+
Sbjct: 292 GATAEIPITRLVRRGIKIIG-SYGA-RPRQDLPELVGLAASGKLDPEALVTHKYKLEEIN 349

Query: 318 KAIQLLKQ 325
           +A + L++
Sbjct: 350 EAYENLRK 357

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  155 bits (393), Expect = 2e-44
 Identities = 78/319 (24%), Positives = 136/319 (42%), Gaps = 24/319 (7%)

Query: 19  FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL 78
              +  G +  G+VVE     V+  K GD V+      C  C  C +   NLC       
Sbjct: 54  PGDIILGHEFVGEVVEV--GVVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYG 111

Query: 79  NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTG 138
              +                      ++EY+ + A++ +   P     +A+ L+    T 
Sbjct: 112 YAGLGGG-----------IDGG----FAEYVRVPADFNLAKLPDGIDEEAAALTEPLATA 156

Query: 139 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 198
           Y    + A V  G +V V+G G +GL A+  A++ GA+ +I +D++P + E  K  G  D
Sbjct: 157 YHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGAD 216

Query: 199 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 258
            +    E +      +  +T G G D   E  G P  L +ALE  + G G V+V+GV   
Sbjct: 217 VVVNPSEDD--AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGG 273

Query: 259 AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK 318
             +PL    +     TL+G+       + D    LD   + +    +L+TH + L++  +
Sbjct: 274 EDIPLPAGLVVSKELTLRGSLRPS--GREDFERALDLLASGKIDPEKLITHRLPLDDAAE 331

Query: 319 AIQLL--KQPDCVKVLITI 335
           A +L   ++ + +KV++  
Sbjct: 332 AYELFADRKEEAIKVVLKP 350

Length = 350

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  146 bits (371), Expect = 5e-42
 Identities = 71/267 (26%), Positives = 110/267 (41%), Gaps = 34/267 (12%)

Query: 28  VSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87
            +G VVE  G  V  VK GD V+      C  CE C        +     L+G       
Sbjct: 37  GAGVVVEV-GPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI-LGEGLDG------- 87

Query: 88  RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK 147
                            ++EY+V+ A+ +V +   +   +A+ L     T Y A  +   
Sbjct: 88  ----------------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGV 131

Query: 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 207
           ++ G +V VLG G VGL A   A+  G A++I  D++  K E  K  G    I+  +E  
Sbjct: 132 LKPGDTVLVLGAGGVGLLAAQLAKAAG-ARVIVTDRSDEKLELAKELGADHVIDYKEED- 189

Query: 208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA 267
               E    +T G G D   +  G P  L++AL   + G G+++V+G         ++  
Sbjct: 190 ---LEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRR 245

Query: 268 LACGGRTLKGTTFGGIKTKSDLPTLLD 294
           L     T+ G+T G   T+ D    LD
Sbjct: 246 LLFKELTIIGSTGG---TREDFEEALD 269

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  142 bits (361), Expect = 1e-39
 Identities = 83/317 (26%), Positives = 136/317 (42%), Gaps = 32/317 (10%)

Query: 30  GKVVESAGDEV------KEVKEGDIVIPTYIGECKECENCTSEMTNLCL---KYPIALNG 80
           G+VV   G  V      + +K GD V  +    C  C  C       C    KY      
Sbjct: 64  GRVVA-LGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEA-- 120

Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-YVVKVDPSIDPSDASFLSCGFTTGY 139
               S     + G           ++E++ +     +V+V  ++    A+  +C   T  
Sbjct: 121 ----SCDDPHLSG----------GYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVL 166

Query: 140 GAAWKEA-KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 198
            AA   A  V  G +V V G G +GL AV  A++ GA ++I ID +P + E  + FG   
Sbjct: 167 -AALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADA 225

Query: 199 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 258
            I+ D+ P+     +V+ IT G G D   E +G P+ + E LE  + G G  +++G    
Sbjct: 226 TIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAP 284

Query: 259 A-MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317
           A  VPL+   +     T+ G               L++ +   F   +L+TH   LE+I+
Sbjct: 285 AGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERTQ-DRFPFAELVTHRYPLEDIN 343

Query: 318 KAIQLLKQPDCVKVLIT 334
           +A++L +    +KV+I 
Sbjct: 344 EALELAESGTALKVVID 360

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  142 bits (359), Expect = 2e-39
 Identities = 94/308 (30%), Positives = 136/308 (44%), Gaps = 29/308 (9%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
            V   G +VK +K GD V    I  C  C  C       C       NGL          
Sbjct: 65  EVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCE------NGLWGWKLGNRID 118

Query: 92  RGQKLYHIFSCSTWSEYM-VIDANY-VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE 149
            GQ           +EY+ V  A+  + K+   +   DA  LS    TG+  A + A ++
Sbjct: 119 GGQ-----------AEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIK 166

Query: 150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS 209
            GS+VAV+G G VGL AV GAR+ GAA+II +D NP + +  K  G TD INP +     
Sbjct: 167 PGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGD--- 223

Query: 210 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALA 269
           I E +  +T G GVD   E  G      +A++  + G G +  +GV         +    
Sbjct: 224 IVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWF 282

Query: 270 CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ--PD 327
               T K    G +  ++ +P LLD  +  +    +L+TH   L++I KA +L       
Sbjct: 283 GKNLTFKT---GLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDG 339

Query: 328 CVKVLITI 335
           C+KV+I  
Sbjct: 340 CIKVVIRP 347

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  136 bits (345), Expect = 1e-37
 Identities = 82/304 (26%), Positives = 130/304 (42%), Gaps = 31/304 (10%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VV + G  V   + GD V+  +   C  C NC      LC     A  G   D       
Sbjct: 65  VVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAY-GWNRDGG----- 118

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
                         +EYM++    ++ +   +  +D + L CG  T Y A  +   V   
Sbjct: 119 -------------HAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGR 164

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
            +V V+G G VGLGA+  AR  GA  +IG+D +P + E  KA G    IN   +  + I 
Sbjct: 165 DTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIR 224

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI-ALAC 270
           EL    T G G D   EC+G  +    ALE  +   G+++++G G    + + V   L  
Sbjct: 225 EL----TSGAGADVAIECSGNTAARRLALEAVRP-WGRLVLVGEG--GELTIEVSNDLIR 277

Query: 271 GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVK 330
             RTL G+ +  +    +    L +    + ++ +L+TH   L++  +A  L  Q +  K
Sbjct: 278 KQRTLIGSWYFSVPDMEECAEFLAR---HKLEVDRLVTHRFGLDQAPEAYALFAQGESGK 334

Query: 331 VLIT 334
           V+  
Sbjct: 335 VVFV 338

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  137 bits (348), Expect = 1e-37
 Identities = 98/342 (28%), Positives = 155/342 (45%), Gaps = 60/342 (17%)

Query: 32  VVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 90
           VVE  G EV+ +K GD +V+P  I  C EC  C   + + C            D+T+  S
Sbjct: 65  VVEEVGPEVRNLKVGDRVVVPFTIA-CGECFYCKRGLYSQC------------DNTNP-S 110

Query: 91  VRGQKLYH-----IFSCS--------TWSEYM-VIDANY-VVKVDPSIDPSDASFLSCGF 135
               KLY      IF  S          +EY+ V  A+    K+   +    A FLS   
Sbjct: 111 AEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDIL 170

Query: 136 TTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG 195
            TGY AA + A+V+ G +VAV G G VGL A   A++ GA ++I ID+ P + E  ++  
Sbjct: 171 PTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHL 229

Query: 196 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV---------------------PS 234
             + IN ++  +  + E ++ +T G G D C +  G+                     P 
Sbjct: 230 GAETINFEEVDD--VVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPD 287

Query: 235 LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLD 294
            L EA++  + G G V +IGV    +    + A    G TL+    G    +  LP LL+
Sbjct: 288 ALREAIQAVRKG-GTVSIIGVYGGTVNKFPIGAAMNKGLTLRM---GQTHVQRYLPRLLE 343

Query: 295 KCKNKEFKLHQLLTHHVKLEEIDKAIQLL--KQPDCVKVLIT 334
             ++ E     ++TH + LE+  +A ++   K+  C+KV++ 
Sbjct: 344 LIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  136 bits (345), Expect = 2e-37
 Identities = 87/301 (28%), Positives = 138/301 (45%), Gaps = 14/301 (4%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VVE+ G+ V +V  GD V+  +   C +C  C       C     A   + L        
Sbjct: 65  VVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTD------ 118

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
            G +L        ++E  ++ A    KVDP+ DP+ A  L CG   G GAA     V++G
Sbjct: 119 -GTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRG 177

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP-DDEPNKSI 210
            SVAV+G G VG  A+ GA + GA+KII +D +  K E  + FG T  +N    +P ++I
Sbjct: 178 DSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAI 237

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM-VPLNVIALA 269
             L    T G G D   +  G P    +A     +  G V+++GV    M + L ++ + 
Sbjct: 238 RAL----TGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVF 292

Query: 270 CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV 329
             G  LK + +G    + D P L+D        L   +T  + L+++++A   +   D +
Sbjct: 293 GRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL 352

Query: 330 K 330
           +
Sbjct: 353 R 353

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  133 bits (338), Expect = 1e-36
 Identities = 87/300 (29%), Positives = 133/300 (44%), Gaps = 40/300 (13%)

Query: 28  VSGKVVESAGDEVKEVKEGDIVIPTYIGE-CKECENCTSEMTNLCLKYPIALNGLMLDST 86
           + G VVE  G+ V  +K GD V   ++   C ECE C S   NLC    I   G   D  
Sbjct: 65  IVGTVVE-VGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT--GYTTDGG 121

Query: 87  SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 146
                             ++EY+V+ A YVVK+   +D ++A+ L C   T Y A  K+A
Sbjct: 122 ------------------YAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKA 162

Query: 147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 206
            V+ G  VAV+G G +G  AV  A+  G A++I I ++  K E  K  G    IN  D  
Sbjct: 163 NVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSEEKLELAKKLGADHVINSSDS- 220

Query: 207 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG-VGVDAMVPLNV 265
                E VK I      D   +  G P+ L  +L+  + G G ++++G  G   +  L  
Sbjct: 221 --DALEAVKEI-----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPA 271

Query: 266 IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325
             L     ++ G+  G      DL   LD     + K    +   + L+EI++A + +++
Sbjct: 272 FLLILKEISIVGSLVGTRA---DLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEK 326

Length = 339

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  130 bits (330), Expect = 2e-35
 Identities = 84/301 (27%), Positives = 131/301 (43%), Gaps = 34/301 (11%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G +++G VVE  G  V   K GD V    +  C  C  C     NLCL      N  M  
Sbjct: 61  GHEIAGTVVE-VGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCL------NQGMPG 113

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 144
               + + G           ++EY+V+ A  +V V   +  + A+  +    T Y A  +
Sbjct: 114 ----LGIDG----------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVR 159

Query: 145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 204
             +V+ G +V V+GLG +GL AV  A+  G A +I +D    K E  K  G  + +N  D
Sbjct: 160 AGEVKPGETVLVIGLGGLGLNAVQIAKAMG-AAVIAVDIKEEKLELAKELGADEVLNSLD 218

Query: 205 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN 264
           +  K       G     G D  F+  G      +A +  K G G+++V+G+G D  + ++
Sbjct: 219 DSPKDKKAAGLGG----GFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDK-LTVD 272

Query: 265 VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 324
           +  L      + G +FGG  T  DLP +LD       KL         L+EI + ++ L 
Sbjct: 273 LSDLIARELRIIG-SFGG--TPEDLPEVLDLIAKG--KL-DPQVETRPLDEIPEVLERLH 326

Query: 325 Q 325
           +
Sbjct: 327 K 327

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  130 bits (328), Expect = 5e-35
 Identities = 79/319 (24%), Positives = 140/319 (43%), Gaps = 42/319 (13%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G +++G++VE  GD V   K GD V       C EC  C     N+C  Y          
Sbjct: 58  GHEIAGEIVEV-GDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNY---------- 106

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVV-----KVDPSIDPSDASF---LSCGFT 136
                    +K  +++    ++EY+ + A  V      K+  ++   +A+    L+C   
Sbjct: 107 ---------KKFGNLYDGG-FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCI- 155

Query: 137 TGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM 196
                A ++A ++ G +V V+G G +GL     A+  GA K+I  D N ++ E  K  G 
Sbjct: 156 ----NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGA 211

Query: 197 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV- 255
              I+  +E    + E V+ +T G G D     TG P   ++ALE  + G G+++  G  
Sbjct: 212 DYTIDAAEE---DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGL 267

Query: 256 GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE 315
              + V ++   +     T+ G+      +  D    L+   + +  +  L+TH   LE+
Sbjct: 268 PKGSTVNIDPNLIHYREITITGSYAA---SPEDYKEALELIASGKIDVKDLITHRFPLED 324

Query: 316 IDKAIQLLKQPDCVKVLIT 334
           I++A +L      +K++IT
Sbjct: 325 IEEAFELAADGKSLKIVIT 343

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  129 bits (326), Expect = 1e-34
 Identities = 88/314 (28%), Positives = 134/314 (42%), Gaps = 36/314 (11%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VVE  G EVK+ K GD VI   I              +          G ML        
Sbjct: 64  VVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQS--------GGMLG------- 108

Query: 92  RGQKLYHIFSCSTWSEYMVI---DANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
            G K +  F    ++EY  +   DAN +  +   +    A  L    +TG+  A + A +
Sbjct: 109 -GWK-FSNFKDGVFAEYFHVNDADAN-LAPLPDGLTDEQAVMLPDMMSTGFHGA-ELANI 164

Query: 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
           + G +VAV G+G VGL AV GAR+ GA +II +   P + E  K +G TD ++     N 
Sbjct: 165 KLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK---NG 221

Query: 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVIA 267
            + E +  +T G GVD      G      +AL+  K G G +  +   G D  +P+    
Sbjct: 222 DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREE 280

Query: 268 LACG--GRTLKGT-TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHV-KLEEIDKAIQLL 323
              G   +T+ G    GG   +  +  L    +       +LLTHH    ++I++A+ L+
Sbjct: 281 WGVGMGHKTINGGLCPGG---RLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLM 337

Query: 324 --KQPDCVKVLITI 335
             K  D +K +I  
Sbjct: 338 KDKPDDLIKPVIIF 351

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  127 bits (321), Expect = 7e-34
 Identities = 75/313 (23%), Positives = 136/313 (43%), Gaps = 41/313 (13%)

Query: 29  SGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 88
           SG VVE  G  V   K GD V+     +C  C  C   + NLC    +   GL       
Sbjct: 73  SGVVVE-VGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDS--LGFIGLG------ 123

Query: 89  MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAAWKE 145
                           ++EY+V+ A +V K+  ++   +A+    L+  +      A + 
Sbjct: 124 -----------GGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWH-----AVRR 167

Query: 146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 205
           +  + G +  VLG G +GL  +   +  GA+KII  + +  ++E  +  G T  ++P + 
Sbjct: 168 SGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEV 227

Query: 206 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLN 264
               +   V+ +T G GVD  F+C GV + L  A++  +   G  + + +         N
Sbjct: 228 ---DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKPISFNPN 283

Query: 265 VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI-DKAIQ-L 322
            + L    +TL G+      T+ D   ++D   + +     L+T  + LE+I +K  + L
Sbjct: 284 DLVL--KEKTLTGSI---CYTREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEEL 338

Query: 323 LKQPD-CVKVLIT 334
           +   +  VK+L++
Sbjct: 339 INDKEQHVKILVS 351

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  121 bits (305), Expect = 1e-31
 Identities = 83/290 (28%), Positives = 123/290 (42%), Gaps = 30/290 (10%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VVE  G  V   K GD V+ + I  C  C  C   + + C      L G ++D T    V
Sbjct: 65  VVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWIL-GNLIDGTQAEYV 123

Query: 92  RGQKLYHIFSCSTWSEYMVIDA-NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
           R                 +  A N + K+   +D   A  LS    TGY       KV+ 
Sbjct: 124 R-----------------IPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKP 166

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           G +VA++G G VGL A+  A+++  +KII +D +  + E  K  G T  +N         
Sbjct: 167 GDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKG---DA 223

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVIALA 269
            E V  +T G GVD   E  G+P+      E    G G +  +GV G    + L  + + 
Sbjct: 224 IEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKPVDLHLEKLWI- 281

Query: 270 CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 319
              + +  TT  G+   +  P LL    + +    +L+TH  KL EI+KA
Sbjct: 282 ---KNITITT--GLVDTNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKA 326

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  121 bits (305), Expect = 1e-31
 Identities = 78/321 (24%), Positives = 129/321 (40%), Gaps = 58/321 (18%)

Query: 29  SGKVVESAGDEVKEVKEGDIV-----IPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           +G VV   G  V  +K GD V     +P     C+ CE C S   NLC            
Sbjct: 63  AGTVVA-VGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLCP----------- 105

Query: 84  DSTSRMSVRGQKLYHIFSCST------WSEYMVIDANYVVKVDPSIDPSDASF---LSCG 134
                          +   +T         Y+   A++  K+  ++   + +    LS G
Sbjct: 106 --------------DMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVG 151

Query: 135 FTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF 194
                  A + A V  G +V V G G +GL     A+  GA K++  D +P + E  K  
Sbjct: 152 V-----HACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKEL 206

Query: 195 GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 254
           G T  +N   E     +E +  +  G G D   ECTG  S +  A+  T+ G G V+++G
Sbjct: 207 GATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVG 265

Query: 255 VGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 314
           +G    V L + A +     ++G      +  +  PT ++   + +  +  L+TH   LE
Sbjct: 266 MGKP-EVTLPLSAASLREIDIRGV----FRYANTYPTAIELLASGKVDVKPLITHRFPLE 320

Query: 315 EIDKAIQLLKQP--DCVKVLI 333
           +  +A +   +     +KV+I
Sbjct: 321 DAVEAFETAAKGKKGVIKVVI 341

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  120 bits (304), Expect = 1e-31
 Identities = 82/327 (25%), Positives = 136/327 (41%), Gaps = 59/327 (18%)

Query: 23  FSGTKVSGKVVESAGDEVKEVKEGDIV-----IPTYIGECKECENCTSEMTNLCLKYPIA 77
           FSGT      VE  G  V ++  GD V     +P     C +CE C     +LC  Y   
Sbjct: 60  FSGT------VEEVGSGVDDLAVGDRVAVNPLLP-----CGKCEYCKKGEYSLCSNY--- 105

Query: 78  LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCG 134
                          G +    F+     EY+ + A  ++K+   +D  +A+     +  
Sbjct: 106 ------------DYIGSRRDGAFA-----EYVSVPARNLIKIPDHVDYEEAAMIEPAAVA 148

Query: 135 FTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF 194
                 A    A +  G +V V+G GT+GL A+   ++ GA ++I +D +  K    +  
Sbjct: 149 LH----AVRL-AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAREL 203

Query: 195 GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 254
           G  D INP +E      E V+ +T G G D   E  G P+ + +AL   + G GKV+++G
Sbjct: 204 GADDTINPKEED----VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVG 258

Query: 255 VGVDAM----VPLNVIALACGGRTLKGT--TFGGIKTKSDLPTLLDKCKNKEFKLHQLLT 308
           +    +         I       T++G+  ++       +  T LD   + + K+  L+T
Sbjct: 259 IPYGDVTLSEEAFEKILR--KELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLIT 316

Query: 309 HHVKLEEIDKAIQLLKQ--PDCVKVLI 333
           H + LE+   A + L        KVL+
Sbjct: 317 HRLPLEDGPAAFERLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  112 bits (283), Expect = 1e-28
 Identities = 85/320 (26%), Positives = 137/320 (42%), Gaps = 49/320 (15%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIV--IPTYIGECKECENCTSEMTNLCLKYPIALNGLM 82
           G ++SG  V   G+ V  +K GD V   P YI  C EC  C     N C           
Sbjct: 58  GHELSG-EVVEVGEGVAGLKVGDRVVVDP-YI-SCGECYACRKGRPNCC----------- 103

Query: 83  LDSTSRMSVRGQKLYHI---FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGY 139
                 + V G    H    F     +EY+V+ A+ ++  +  +    A+ +      G 
Sbjct: 104 ----ENLQVLG---VHRDGGF-----AEYIVVPADALLVPE-GLSLDQAALVEP-LAIGA 149

Query: 140 GAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 199
            A  + A V  G +V V+G G +GLG +  A+  G A++I +D +  + E  +  G  D 
Sbjct: 150 HAVRR-AGVTAGDTVLVVGAGPIGLGVIQVAKARG-ARVIVVDIDDERLEFARELGADDT 207

Query: 200 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDA 259
           IN  DE        ++ +T G G D   + TG P+ + EA+E    G G+V+++G+    
Sbjct: 208 INVGDEDVA---ARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGL-SKG 262

Query: 260 MVPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317
            V              K  T  G +  T+ D P ++D  ++ +     L+TH    E++ 
Sbjct: 263 PVTFPDPEF-----HKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDVP 317

Query: 318 KAIQLLKQPD--CVKVLITI 335
           +A  L + P    +KVLI  
Sbjct: 318 EAFDLWEAPPGGVIKVLIEF 337

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score =  105 bits (265), Expect = 4e-28
 Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 5/134 (3%)

Query: 162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM 221
           VGL AV  A+  GAA++I +D++  K E  K  G    IN  DE      E V+ +T G 
Sbjct: 2   VGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDE---DFVERVRELTGGR 58

Query: 222 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG 281
           GVD   +C G P+ L +ALE  + G G+V+V+G+   A VP  +  L     T+ G+  G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPG-GRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGG 117

Query: 282 GIKT-KSDLPTLLD 294
           G +  +  L  L  
Sbjct: 118 GREEFEEALELLAS 131

Length = 131

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  108 bits (272), Expect = 5e-27
 Identities = 88/308 (28%), Positives = 136/308 (44%), Gaps = 30/308 (9%)

Query: 30  GKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRM 89
           G+VVE  G EV+ +K GD V+  +   C EC  C    +  C K      G +       
Sbjct: 63  GEVVE-VGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAK------GGLFGYAGSP 115

Query: 90  SVRGQKLYHIFSCSTWSEYMVI---DANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 146
           ++ G +          +EY+ +   D   ++K+   +    A  L     TGY  A K A
Sbjct: 116 NLDGAQ----------AEYVRVPFADGT-LLKLPDGLSDEAALLLGDILPTGYFGA-KRA 163

Query: 147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 206
           +V  G +VAV+G G VGL AV  A++ GAA++  +D  P + E+  A G  + IN +D  
Sbjct: 164 QVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALG-AEPINFEDAE 222

Query: 207 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI 266
                E V+  T G G D   E  G  + L  A +  + G G +  +GV      P   +
Sbjct: 223 PV---ERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEEFPFPGL 278

Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 326
                  TL+   FG    +S  P LL   ++    L  L+ H + LEE  +A +L  + 
Sbjct: 279 DAYNKNLTLR---FGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKR 335

Query: 327 DCVKVLIT 334
             +KV++ 
Sbjct: 336 KVLKVVLD 343

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  103 bits (258), Expect = 5e-25
 Identities = 74/312 (23%), Positives = 129/312 (41%), Gaps = 48/312 (15%)

Query: 19  FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCL---KYP 75
           F L   G + +G V E  G  V  +KEGD V+      C  C  C     N C       
Sbjct: 59  FTL---GHENAGWVEE-VGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPG 114

Query: 76  IALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF 135
           I  +G                         +EY+++ +  +VK+   +DP +A+ L+   
Sbjct: 115 IGTDGGF-----------------------AEYLLVPSRRLVKLPRGLDPVEAAPLADAG 151

Query: 136 TTGYGAAWKEAKV-EKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGK 192
            T Y A  K     + GS+V V+G+G  GLG  AV   R    A +I +D++    +  +
Sbjct: 152 LTAYHAVKKALPYLDPGSTVVVIGVG--GLGHIAVQILRALTPATVIAVDRSEEALKLAE 209

Query: 193 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV 252
             G    +N  D+      E V+ +T G G D   +  G    L+ A +    G G+ ++
Sbjct: 210 RLGADHVLNASDDV----VEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVI 264

Query: 253 IGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK 312
           +G G      L    L     ++ G+ +G   T+++L  ++   ++ + K+         
Sbjct: 265 VGYG--GHGRLPTSDLVPTEISVIGSLWG---TRAELVEVVALAESGKVKVE---ITKFP 316

Query: 313 LEEIDKAIQLLK 324
           LE+ ++A+  L+
Sbjct: 317 LEDANEALDRLR 328

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  102 bits (257), Expect = 7e-25
 Identities = 69/298 (23%), Positives = 127/298 (42%), Gaps = 37/298 (12%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G + +G VVE  G++V   + GD V   ++  C  C  C +  +N+C             
Sbjct: 59  GHEFAGVVVE-VGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVC------------- 104

Query: 85  STSRMSVRGQKLYHIFSC-STWSEYMVI---DANYVVKVDPSIDPSDASFLSCGFTTGYG 140
                   G      F+   +++EY+ +   D N +V++   +D   A+ L C F T + 
Sbjct: 105 --EHQVQPG------FTHPGSFAEYVAVPRADVN-LVRLPDDVDFVTAAGLGCRFATAFR 155

Query: 141 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           A   +A+V+ G  VAV G G VGL AV  A   G A++I +D +  K E  +  G    +
Sbjct: 156 ALVHQARVKPGEWVAVHGCGGVGLSAVMIASALG-ARVIAVDIDDDKLELARELGAVATV 214

Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV--GVD 258
           N  +  +  ++  V+ +T G G     +  G+P     ++ + +   G+ + +G+  G +
Sbjct: 215 NASEVED--VAAAVRDLTGG-GAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEE 270

Query: 259 AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316
           A V L +  +      + G + G          +L    + +     L+   + L+E 
Sbjct: 271 AGVALPMDRVVARELEIVG-SHG--MPAHRYDAMLALIASGKLDPEPLVGRTISLDEA 325

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  101 bits (253), Expect = 2e-24
 Identities = 85/311 (27%), Positives = 125/311 (40%), Gaps = 36/311 (11%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VVE  G EV  VK GD VI  +      C  C +  T  C+                   
Sbjct: 64  VVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVH---------GGFWGAFVD 114

Query: 92  RGQKLYHIFSCSTWSEYMVIDANY-VVKVDPSIDPSDASFLSCGFT------TGYGAAWK 144
            GQ  Y            V  A+  +VKV P     D   L           TG+ AA  
Sbjct: 115 GGQGEY----------VRVPLADGTLVKV-PGSPSDDEDLLPSLLALSDVMGTGHHAA-V 162

Query: 145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 204
            A V  GS+V V+G G VGL AV  A+  GA +II + ++  ++   + FG TD +    
Sbjct: 163 SAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIV---A 219

Query: 205 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN 264
           E  +     V+ +T G+G D   EC G    + +A+   + G G+V  +GV     V L+
Sbjct: 220 ERGEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG-VELD 277

Query: 265 VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 324
           V  L      L G   G    +  LP LLD          ++    + L+E+ +  + + 
Sbjct: 278 VRELFFRNVGLAG---GPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMD 334

Query: 325 QPDCVKVLITI 335
           +   +KVL+  
Sbjct: 335 ERRAIKVLLRP 345

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  100 bits (251), Expect = 3e-24
 Identities = 83/337 (24%), Positives = 132/337 (39%), Gaps = 87/337 (25%)

Query: 23  FSGTKVSGKVVESAGDEVKEVKEGDIVI--PTYIGECKECENCTSEMTNLCLK---YPIA 77
           F+G      VV + G +V   K GD V   P     C EC  C     NLC       + 
Sbjct: 60  FAG------VVVAVGSKVTGFKVGDRVAVDPNIY--CGECFYCRRGRPNLCENLTAVGVT 111

Query: 78  LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCG 134
            NG            G           ++EY+V+ A  V K+  ++   +A+    LSC 
Sbjct: 112 RNG------------G-----------FAEYVVVPAKQVYKIPDNLSFEEAALAEPLSC- 147

Query: 135 FTTGYGAAW--KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK 192
                 A        ++ G SV V G G +GL      +++GA+++   + N  K E  K
Sbjct: 148 ------AVHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK 201

Query: 193 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV 252
             G T+ ++P  E  ++  E         G D   E TGVP  L +A+E  + G G V+V
Sbjct: 202 KLGATETVDPSREDPEAQKEDNPY-----GFDVVIEATGVPKTLEQAIEYARRG-GTVLV 255

Query: 253 IGVG-VDAMVPLN--------------VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCK 297
            GV   DA V ++               I      R +                LL+  K
Sbjct: 256 FGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIA---------------LLESGK 300

Query: 298 NKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 334
                +  L++H + LEE+ +A++ ++    +KV++ 
Sbjct: 301 ---IDVKGLVSHRLPLEEVPEALEGMRSGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  100 bits (251), Expect = 4e-24
 Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 46/302 (15%)

Query: 32  VVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 90
           VV + G  V  +K GD V +      C +CE C +    LC     +  G  +D T    
Sbjct: 67  VVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS--GYTVDGT---- 120

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
                         ++EY + DA YV  +   +    A+ L C   T Y A  K+A ++ 
Sbjct: 121 --------------FAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL-KKAGLKP 165

Query: 151 GSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
           G  V + G G  GLG   V  A+  G  ++I ID    K E  K  G   F++       
Sbjct: 166 GDWVVISGAGG-GLGHLGVQYAKAMG-LRVIAIDVGDEKLELAKELGADAFVDFKKS--- 220

Query: 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL 268
              E VK +T G G           +   +AL+  + G G ++ +G+     +PL+   L
Sbjct: 221 DDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPGGFIPLDPFDL 279

Query: 269 ACGGRTLKGTTFGGIKTKSDLPTLLD-----KCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323
              G T+ G+  G   T+ DL   L+     K K    ++       V LE++++  + +
Sbjct: 280 VLRGITIVGSLVG---TRQDLQEALEFAARGKVK-PHIQV-------VPLEDLNEVFEKM 328

Query: 324 KQ 325
           ++
Sbjct: 329 EE 330

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 99.3 bits (248), Expect = 4e-24
 Identities = 65/244 (26%), Positives = 105/244 (43%), Gaps = 37/244 (15%)

Query: 106 SEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165
           +E +V+ AN +V +   + P  A+  +    T        A+   G  VAV+GLG VGL 
Sbjct: 55  AERVVVPANLLVPLPDGLPPERAALTALA-ATALNGVRD-AEPRLGERVAVVGLGLVGLL 112

Query: 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY 225
           A   A+  GA +++G+D +  ++E  +A G  D +  D                G G D 
Sbjct: 113 AAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADV 162

Query: 226 CFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRT-LKGTTF---- 280
             E +G PS L  AL   +   G+V+++G      + L       G     K        
Sbjct: 163 VIEASGSPSALETALRLLRDR-GRVVLVGWYGLKPLLL-------GEEFHFKRLPIRSSQ 214

Query: 281 -GGIKTKSDLPTLLDKCKNKEF--------KLHQLLTHHVKLEEIDKAIQLLKQ--PDCV 329
             GI  + D P    + +N E         +L  L+TH V  E+  +A +LL +  P+C+
Sbjct: 215 VYGI-GRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECL 273

Query: 330 KVLI 333
           KV++
Sbjct: 274 KVVL 277

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 99.6 bits (249), Expect = 7e-24
 Identities = 90/320 (28%), Positives = 142/320 (44%), Gaps = 49/320 (15%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G + +G+VVE  G+ V  VK GD V   T+I  C +C  C +   ++C    I    L +
Sbjct: 62  GHEFAGEVVE-VGEGVTRVKVGDYVSAETHIV-CGKCYQCRTGNYHVCQNTKI----LGV 115

Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 143
           D+                   ++EY+V+    + K D  I P  AS          G A 
Sbjct: 116 DTDG----------------CFAEYVVVPEENLWKNDKDIPPEIASIQE-----PLGNAV 154

Query: 144 KEAKVE--KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 201
                    G SV + G G +GL A+  A+  GA+ +I  D NP++ E  K  G    IN
Sbjct: 155 HTVLAGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVIN 214

Query: 202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV 261
           P +E        VK +T G GVD   E +G P  + + L+    G G+V ++G+     V
Sbjct: 215 PREEDVV----EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGL-PPGPV 268

Query: 262 PLNVIALACGGRTLKGTTFGGI------KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE 315
            +++  L       KG T  GI      +T   +  LL   K+ +  L  ++TH + LE+
Sbjct: 269 DIDLNNLV----IFKGLTVQGITGRKMFETWYQVSALL---KSGKVDLSPVITHKLPLED 321

Query: 316 IDKAIQLLKQPDCVKVLITI 335
            ++A +L++   C KV++  
Sbjct: 322 FEEAFELMRSGKCGKVVLYP 341

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 97.4 bits (243), Expect = 5e-23
 Identities = 84/312 (26%), Positives = 138/312 (44%), Gaps = 40/312 (12%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G ++ G V E  G+ V+  K GD VI  Y   C +CE C S   NLC +      G  +D
Sbjct: 59  GHEIVGTVEEV-GEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLC-RNRAEY-GEEVD 115

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 144
                               ++EY+ +    +VK+  ++    A+  +C   T   A  K
Sbjct: 116 GG------------------FAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL-K 156

Query: 145 EAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
            A V+KG +V V G  G VG+ A+  A+  G A++I + ++P K +  K  G    I+  
Sbjct: 157 RAGVKKGDTVLVTGAGGGVGIHAIQLAKALG-ARVIAVTRSPEKLKILKELGADYVID-- 213

Query: 204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 263
                  SE VK +    G D   E  G P+ + E+L +   G G++++IG       PL
Sbjct: 214 ---GSKFSEDVKKLG---GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDPAPL 265

Query: 264 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323
               L      + G+      TK+D+   L   K  + K   ++   V LE+I++A++ L
Sbjct: 266 RPGLLILKEIRIIGSISA---TKADVEEALKLVKEGKIK--PVIDRVVSLEDINEALEDL 320

Query: 324 KQPDCV-KVLIT 334
           K    V ++++ 
Sbjct: 321 KSGKVVGRIVLK 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 96.9 bits (242), Expect = 8e-23
 Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 40/305 (13%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGD--IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 82
           G ++ G+VV   G +  +VK GD  +V P +IG C EC  C +   NLC K   AL    
Sbjct: 71  GHEIVGEVVA-VGPDAADVKVGDKVLVYP-WIG-CGECPVCLAGDENLCAK-GRALG--- 123

Query: 83  LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 142
                           IF    ++EY+++  +  +     +DP+ A+ L+C   T Y A 
Sbjct: 124 ----------------IFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAV 167

Query: 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 202
            K   +     V ++G G +GL A+   +  G A II +D +  K E  KA G    +N 
Sbjct: 168 KKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG 227

Query: 203 DDE-PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAM 260
            D    K I +   G     GVD   +     +  S A +    G GK++++G+ G +A 
Sbjct: 228 SDPDAAKRIIKAAGG-----GVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEAT 281

Query: 261 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320
           +PL ++ L     T++G+  G ++   +L  L      K  KL  +      L +++ A+
Sbjct: 282 LPLPLLPL--RALTIQGSYVGSLEELRELVALA-----KAGKLKPIPLTERPLSDVNDAL 334

Query: 321 QLLKQ 325
             LK 
Sbjct: 335 DDLKA 339

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 94.9 bits (236), Expect = 6e-22
 Identities = 73/318 (22%), Positives = 123/318 (38%), Gaps = 35/318 (11%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G + SG VVE  G  VK  ++GD V    +  C  C  C S   N C    +   G   D
Sbjct: 92  GHEFSG-VVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKN--LKELGFSAD 148

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSID--PSDASFLSCGFTTGYGAA 142
                               ++EY+ ++A Y  +++   +    D +F +         A
Sbjct: 149 GA------------------FAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVA 190

Query: 143 W-----KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT 197
           +     +      G+ V V G G +GL A+  A+  GA+K+I  + +  ++   K  G  
Sbjct: 191 YNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGAD 250

Query: 198 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257
              NP    +    E V  +T G G D   E  G P      +E +    GK++ IG   
Sbjct: 251 YVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRA- 309

Query: 258 DAMVPLNVIALACGGRTLKGTTFG--GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE 315
              VPL++  L       +    G  G       P+++    + +  + +++T    LE 
Sbjct: 310 ATTVPLHLEVLQVR----RAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEG 365

Query: 316 IDKAIQLLKQPDCVKVLI 333
           I +AI+   +    K+ I
Sbjct: 366 IMEAIKAASERTDGKITI 383

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 92.9 bits (232), Expect = 2e-21
 Identities = 67/258 (25%), Positives = 106/258 (41%), Gaps = 31/258 (12%)

Query: 30  GKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 88
           G VV   G +V + K GD V +   +  C  CE C S     C K  +  NG   D T  
Sbjct: 63  GIVVA-VGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGT-- 119

Query: 89  MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
                       +   +++++V+D  +V K+   +D + A+ L C   T Y +  K   V
Sbjct: 120 -----------ITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVY-SPLKRNGV 167

Query: 149 EKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 206
             G  V V+G+G  GLG  AV  A+  G A++    ++P KKE     G  +FI   D  
Sbjct: 168 GPGKRVGVVGIG--GLGHLAVKFAKALG-AEVTAFSRSPSKKEDALKLGADEFIATKDPE 224

Query: 207 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI 266
                           +D   +       L   L   K G G ++++G   + + P+   
Sbjct: 225 AMK--------KAAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL-PVPPF 274

Query: 267 ALACGGRTLKGTTFGGIK 284
            L  G +++ G+  GG K
Sbjct: 275 PLIFGRKSVAGSLIGGRK 292

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 92.4 bits (230), Expect = 3e-21
 Identities = 94/324 (29%), Positives = 135/324 (41%), Gaps = 44/324 (13%)

Query: 16  QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP 75
            R+   V  G +V G  VE  G+ VK  K GD V          CE C S     C    
Sbjct: 50  PRMKYPVILGHEVVG-TVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC---- 104

Query: 76  IALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF 135
                      +R+   G++L   F     +EY  +    +VKV P++    A  + C  
Sbjct: 105 ----------KNRLGY-GEELDGFF-----AEYAKVKVTSLVKVPPNVSDEGAVIVPCVT 148

Query: 136 TTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF 194
              Y    + A V+KG +V V G  G VG+ A+  A+  G AK+I +  +  K +    +
Sbjct: 149 GMVYRGL-RRAGVKKGETVLVTGAGGGVGIHAIQVAKALG-AKVIAVTSSESKAKIVSKY 206

Query: 195 GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 254
              D++          SE VK I    G D   E  G P+ L E+L +  +G GK+I IG
Sbjct: 207 A--DYV----IVGSKFSEEVKKIG---GADIVIETVGTPT-LEESLRSLNMG-GKIIQIG 255

Query: 255 VGVDAMVPLNVIALACGGRTLKGTTFGGI--KTKSDLPTLLDKCKNKEFKLHQLLTHHVK 312
             VD   P    +L  G   LK     G    TK D+   L      E K+  ++   V 
Sbjct: 256 -NVD---PSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLV--AEGKIKPVIGAEVS 309

Query: 313 LEEIDKAIQLLKQPDCV-KVLITI 335
           L EIDKA++ LK    + K+L+  
Sbjct: 310 LSEIDKALEELKDKSRIGKILVKP 333

Length = 334

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 91.5 bits (228), Expect = 6e-21
 Identities = 77/315 (24%), Positives = 134/315 (42%), Gaps = 36/315 (11%)

Query: 24  SGTKVSGKVVESAGDEVKEVKEGDIVIPTYIG-ECKECENCTSEMTNLCLKYPIALNGLM 82
            G+  +G VVE+ G  V  VK G  V+  Y G  C  CE C +   NLC +Y I   G  
Sbjct: 61  LGSDGAG-VVEAVGPGVTNVKPGQRVV-IYPGISCGRCEYCLAGRENLCAQYGIL--GEH 116

Query: 83  LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 142
           +D                     +EY+ + A  ++ +  ++   +A+     F T +   
Sbjct: 117 VDGGY------------------AEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHML 158

Query: 143 WKEAKVEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 201
              A++  G +V V G G+ VG  A+  A++ G A +I    +  K E+ K  G    I+
Sbjct: 159 VTRARLRPGETVLVHGAGSGVGSAAIQIAKLFG-ATVIATAGSEDKLERAKELGADYVID 217

Query: 202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV 261
              E        V+ +T   GVD   E  G  +   ++L++   G G+++  G       
Sbjct: 218 YRKED---FVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGYEA 272

Query: 262 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321
           P+++  +     ++ G+T G   TK++L   L        KL  ++     LEE  +A +
Sbjct: 273 PIDLRHVFWRQLSILGSTMG---TKAELDEALRLVFRG--KLKPVIDSVFPLEEAAEAHR 327

Query: 322 LLKQPDCV-KVLITI 335
            L+  +   K+++T 
Sbjct: 328 RLESREQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 88.0 bits (218), Expect = 1e-19
 Identities = 81/311 (26%), Positives = 135/311 (43%), Gaps = 34/311 (10%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G +V+G+VV   G  V+ +K GD V + T+I  C +C  C     ++C            
Sbjct: 60  GHEVAGEVVG-IGPGVEGIKVGDYVSVETHI-VCGKCYACRRGQYHVC------------ 105

Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 143
                   +  K++ + +   ++EY V+ A  + K   SI P  A+        G     
Sbjct: 106 --------QNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQE---PLGNAVHT 154

Query: 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
             A    G SV V G G +GL A+  A+  GA  +I  D N ++ E  K  G T  +NP 
Sbjct: 155 VLAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPF 214

Query: 204 DE-PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 262
            E   K +++L    T G GVD   E +G P  L + L+    G G+V ++G+    +  
Sbjct: 215 KEDVVKEVADL----TDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTI 269

Query: 263 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 322
                +   G T+ G T  G        T+    ++ +  L  ++TH  K ++ +K  +L
Sbjct: 270 DFTNKVIFKGLTIYGIT--GRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFEL 327

Query: 323 LKQPDCVKVLI 333
           ++     KV++
Sbjct: 328 MRSGQTGKVIL 338

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 88.0 bits (219), Expect = 1e-19
 Identities = 82/329 (24%), Positives = 130/329 (39%), Gaps = 46/329 (13%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
            VE  G  V+ +K GD V+  +   C  C NC   +T +CL       G           
Sbjct: 64  EVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPY 123

Query: 92  RGQKLYHIFSCSTWSEYMVI---DANYVV--KVDPSIDPSDASFLSCGFTTGYGAAWKEA 146
            G            +EY+ +   D N +     D + +  D   LS  F TG+    + A
Sbjct: 124 GG----------GQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELA 172

Query: 147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DFINPDD 204
            V+ G +VAV G G VGL A   A + GA+++  +D  P + +  ++ G    DF + D 
Sbjct: 173 GVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDFSDGDP 232

Query: 205 EPNKSISELVKGITHGM---GVDYC-FECTG-----VPSL-LSEALETTKVGKGKVIVIG 254
                  E + G+  G     VD   +E         P+L L++ +  T+ G G + ++G
Sbjct: 233 ------VEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVG 285

Query: 255 V--------GVDAMVPLNVIALACGGRTLKGTTFG-GI-KTKSDLPTLLDKCKNKEFKLH 304
           V        G  A      ++   G    KG +FG G    K     L D       K  
Sbjct: 286 VYVAEDPGAGDAAAKQGE-LSFDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPS 344

Query: 305 QLLTHHVKLEEIDKAIQLLKQPDCVKVLI 333
            +++H + LE+  +A     +    KV+I
Sbjct: 345 FVVSHVISLEDAPEAYARFDKRLETKVVI 373

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 85.9 bits (213), Expect = 5e-19
 Identities = 74/318 (23%), Positives = 118/318 (37%), Gaps = 60/318 (18%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G++ +G VV + G  V   K GD V                          +  +G    
Sbjct: 62  GSEAAG-VVVAVGSGVTGFKVGDRVAALG---------------------GVGRDG---- 95

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 144
                               ++EY+V+ A+++V +   +   +A+ L     T + A + 
Sbjct: 96  -------------------GYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFD 136

Query: 145 EAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
            A ++ G +V V G  G VG  A+  A+  GA  +  +     K E  K  G    IN  
Sbjct: 137 RAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSS-SEKLELLKELGADHVINYR 195

Query: 204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVP 262
           +E      E V+ +T G GVD   +  G     + +L     G G+++ IG       VP
Sbjct: 196 EE---DFVEQVRELTGGKGVDVVLDTVG-GDTFAASLAALAPG-GRLVSIGALSGGPPVP 250

Query: 263 LNVIALACGGRTLKGTTFGG---IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 319
           LN++ L     TL+G T G          L  L D       KL  ++     L E   A
Sbjct: 251 LNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLL--ASGKLKPVIDRVYPLAEAPAA 308

Query: 320 I-QLLKQPDCV-KVLITI 335
              LL +     KV++ +
Sbjct: 309 AAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 84.7 bits (210), Expect = 1e-18
 Identities = 84/304 (27%), Positives = 130/304 (42%), Gaps = 44/304 (14%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G + +G VVE  GD VK VK+GD V+         C+ C S    LC       NG    
Sbjct: 59  GAEFAG-VVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCR------NG---- 107

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 144
               + V             ++EY+V+    + K+  SI    A+ L     T Y A  K
Sbjct: 108 --GIIGVVSN--------GGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL-K 156

Query: 145 EAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
            A +  G +V V G  G  G+ AV  A+M G A++I + +  W KE    FG  + ++ D
Sbjct: 157 TAGLGPGETVVVFGASGNTGIFAVQLAKMMG-AEVIAVSRKDWLKE----FGADEVVDYD 211

Query: 204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 263
           +     + E VK IT  M  D      G  S    +L     G G+++  G      V L
Sbjct: 212 E-----VEEKVKEIT-KM-ADVVINSLG-SSFWDLSLSVLGRG-GRLVTFGTLTGGEVKL 262

Query: 264 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323
           ++  L     ++ G+T G   T+ +L  L+   K+ + K+ +      KLEE  +A++ L
Sbjct: 263 DLSDLYSKQISIIGSTGG---TRKELLELVKIAKDLKVKVWKTF----KLEEAKEALKEL 315

Query: 324 KQPD 327
              +
Sbjct: 316 FSKE 319

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 83.1 bits (206), Expect = 4e-18
 Identities = 60/261 (22%), Positives = 107/261 (40%), Gaps = 41/261 (15%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGE-CKECENCTSEMTNLC---LKYPIALNG 80
           G + SG +VE  G +V+  K GD V+       C  C  C     NLC          +G
Sbjct: 60  GHEFSGTIVE-VGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADG 118

Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTT 137
                                    +EY+++    + ++  ++    A+    L+     
Sbjct: 119 GF-----------------------AEYVLVPEESLHELPENLSLEAAALTEPLAVA--- 152

Query: 138 GYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKII-GIDKNPWKKEKGKAFGM 196
              A  + + +  G +V V G G +GL A   A++ GA  ++ G +K+  + +  K  G 
Sbjct: 153 -VHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGA 211

Query: 197 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG 256
              +N  +E    ++ELV  IT G G D   EC+G    L +ALE  + G G+++ +G+ 
Sbjct: 212 DA-VNGGEE---DLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIF 266

Query: 257 VDAMVPLNVIALACGGRTLKG 277
                 ++V  +     ++ G
Sbjct: 267 GPLAASIDVERIIQKELSVIG 287

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 81.9 bits (203), Expect = 1e-17
 Identities = 82/325 (25%), Positives = 124/325 (38%), Gaps = 57/325 (17%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVI-----PTYIGECKECENCTSEMTNLCLKYPIALN 79
           G +VSG VVE+ G  V  +  G  V      P     C  C+ C +   NLCL      N
Sbjct: 58  GHEVSG-VVEAVGPGVTGLAPGQRVAVNPSRP-----CGTCDYCRAGRPNLCL------N 105

Query: 80  GLMLDSTSRMS-VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGF 135
              L S  R   V+G           + EY+V+DA+  V +   +    A+    L+   
Sbjct: 106 MRFLGSAMRFPHVQG----------GFREYLVVDASQCVPLPDGLSLRRAALAEPLAVAL 155

Query: 136 TTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG 195
                 A   A    G  V V G G +G   V  AR  GAA+I+  D         +A G
Sbjct: 156 -----HAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMG 210

Query: 196 MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV 255
             + +N   +P      L          D  FE +G P+ L+ AL   + G G V+ +G+
Sbjct: 211 ADETVNLARDP------LAAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGM 263

Query: 256 GVDAM-VPLNVIALACGGR--TLKGT-TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHV 311
               + +PLN +      +   L+G+  F       +    +         +  L+T   
Sbjct: 264 LGGPVPLPLNALV----AKELDLRGSFRFD-----DEFAEAVRLLAAGRIDVRPLITAVF 314

Query: 312 KLEEIDKAIQLLK-QPDCVKVLITI 335
            LEE  +A  L   +   VKV ++ 
Sbjct: 315 PLEEAAEAFALAADRTRSVKVQLSF 339

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 81.2 bits (201), Expect = 2e-17
 Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 16/238 (6%)

Query: 103 STWSEYMVIDANYVVKVDPSID--PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLG 160
             ++EY + DA++ V +   +D        L C         ++   +  G +VAV+G G
Sbjct: 85  GAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCALN-----VFRRGWIRAGKTVAVIGAG 139

Query: 161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHG 220
            +GL  +  A   GA ++I ID+ P +    +  G T+ +  D E   +I E V+ +T G
Sbjct: 140 FIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSE---AIVERVRELTGG 196

Query: 221 MGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF 280
            G D   E  G    L  A E      G++++ G   D   P+        G  L     
Sbjct: 197 AGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVE 255

Query: 281 G--GIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ-LLKQPD-CVKVLIT 334
               I     +   +    +    L  LLTH   LEE+  A +   ++PD  +K +I 
Sbjct: 256 RDPRIGL-EGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVIV 312

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 79.4 bits (196), Expect = 1e-16
 Identities = 82/320 (25%), Positives = 126/320 (39%), Gaps = 57/320 (17%)

Query: 30  GKVVE-SAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI-----ALNGLML 83
           G+VVE   G E + VK GD VI   I  C  C  C      +C K+ +      +NG M 
Sbjct: 72  GRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGM- 130

Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVV-KVDPSIDPSDASF---LSCGFTTGY 139
                                 +EYM      +V KV   I P DA     L+C      
Sbjct: 131 ----------------------AEYMRFPKEAIVHKVPDDIPPEDAILIEPLACAL---- 164

Query: 140 GAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 199
             A   A ++    V + G G +GLG +  AR+    K+I +D    +    + FG    
Sbjct: 165 -HAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVV 223

Query: 200 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVD 258
           +NP   P   + E +K +T G G D   E TG PS + + L   +   G+ +   V G  
Sbjct: 224 LNP---PEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIR-KLGRFVEFSVFGDP 279

Query: 259 AMVPLNVIA----LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE 314
             V  ++I     L   G  L    +         P  +D   +       ++TH   LE
Sbjct: 280 VTVDWSIIGDRKELDVLGSHLGPYCY---------PIAIDLIASGRLPTDGIVTHQFPLE 330

Query: 315 EIDKAIQLLKQP-DCVKVLI 333
           + ++A +L+ +  D +KV++
Sbjct: 331 DFEEAFELMARGDDSIKVVL 350

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 78.7 bits (194), Expect = 1e-16
 Identities = 64/260 (24%), Positives = 101/260 (38%), Gaps = 37/260 (14%)

Query: 30  GKVVESAGDEVKE-----VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G+VV   G          ++ G  V+ +    C  C  C   +   C             
Sbjct: 8   GEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCD------------ 55

Query: 85  STSRMSVRGQKLYHIFSCSTW------SEYMVIDANY-VVKVDPSIDPSDASFLSCGFTT 137
                S+R  K  H    S W      +E+  + A   +V V   +  + A+   C   T
Sbjct: 56  -----SLR--KYGHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATAT 108

Query: 138 GYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT 197
              AA + A   KG  V V+G G +GL A   A   GAA+++  D +P ++E   +FG T
Sbjct: 109 -VMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGAT 167

Query: 198 DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257
               P+       +E   G+ +G GVD   E +G  + +   LE+  VG   V+   V  
Sbjct: 168 ALAEPEVL-----AERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFP 222

Query: 258 DAMVPLNVIALACGGRTLKG 277
              V L+   +     T++G
Sbjct: 223 GGPVALDPEQVVRRWLTIRG 242

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 77.3 bits (190), Expect = 6e-16
 Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 35/244 (14%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G ++SG+V+++       +  G  VI   +  C ECE C +    +C    +  N +   
Sbjct: 58  GHEISGRVIQAGAGAASWI--GKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQ-- 113

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS------IDPSDASFLSCGFTTG 138
                               ++ ++V+ A  +  VD +      +     S ++   TT 
Sbjct: 114 ------------------GGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP 155

Query: 139 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 198
           Y AA + A ++KG  V V+G G VG   V  A+  GAA ++ ID +P K E  K FG   
Sbjct: 156 YQAAVQ-AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADL 213

Query: 199 FINPDDEPNKSISELVKGITHGMGVDY----CFECTGVPSLLSEALETTKVGKGKVIVIG 254
            +NP D+  + + +L+K      G+       FEC+G       AL     G G ++V+G
Sbjct: 214 TLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVG 272

Query: 255 VGVD 258
             + 
Sbjct: 273 YTMA 276

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 12/231 (5%)

Query: 106 SEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG 165
           +EYM++    +++V   +   DA+ L+     G  A  + A++  G    V+G G +GL 
Sbjct: 119 AEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAVRR-ARLTPGEVALVIGCGPIGLA 176

Query: 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY 225
            +   +  G   I+  D +P ++    A G    ++P  +   +          G     
Sbjct: 177 VIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAV 236

Query: 226 CFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTT--FGGI 283
            FEC G P L+ + +E    G G+++V+GV    M   N+          K  T  F   
Sbjct: 237 IFECVGAPGLIQQIIEGAPPG-GRIVVVGV---CMESDNIEPALA---IRKELTLQFSLG 289

Query: 284 KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLI 333
            T  +    LD     +  +  ++T  V L+ +  A + L+ P+   K+L+
Sbjct: 290 YTPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILV 340

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 74.5 bits (184), Expect = 5e-15
 Identities = 78/330 (23%), Positives = 125/330 (37%), Gaps = 78/330 (23%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGE----CKECENCTSEMTNLCLKYPIALNG 80
           G +  G+VVE  G EV   K GD V     GE    C  C NC +   +LC        G
Sbjct: 62  GHEFVGEVVE-VGSEVTGFKVGDRVS----GEGHIVCGHCRNCRAGRRHLC----RNTKG 112

Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
           + ++                    ++EY+VI A  V K+   I    A+         +G
Sbjct: 113 VGVNRPG----------------AFAEYLVIPAFNVWKIPDDIPDDLAAIFD-----PFG 151

Query: 141 AAWKEAKVEK-------GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA 193
            A     V         G  V + G G +G+ A   A+  GA  ++  D N ++ E  + 
Sbjct: 152 NA-----VHTALSFDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARK 206

Query: 194 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 253
            G T  +N   E    + +++  +    G D   E +G PS   + L+    G G++ ++
Sbjct: 207 MGATRAVNVAKE---DLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAML 262

Query: 254 GVGVDAM-VPLN-VIALACGGRTLKGTTFGGI----------KTKSDLPTLLDKCKNKEF 301
           G+    M +  N VI         KG T  GI          K  + L + LD       
Sbjct: 263 GIPPGDMAIDWNKVI--------FKGLTIKGIYGREMFETWYKMSALLQSGLD------- 307

Query: 302 KLHQLLTHHVKLEEIDKAIQLLKQPDCVKV 331
            L  ++TH   +++  K  + ++     KV
Sbjct: 308 -LSPIITHRFPIDDFQKGFEAMRSGQSGKV 336

Length = 341

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 73.5 bits (181), Expect = 9e-15
 Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 42/274 (15%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKY---PIALNG 80
           G ++ G+VVE  G  V+  K GD V +   +G C  CE C   + NLC K         G
Sbjct: 58  GHEIVGEVVE-VGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQG 116

Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
                                   ++EYMV DA Y V +   +  + A+ L C   T Y 
Sbjct: 117 -----------------------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVY- 152

Query: 141 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A ++A    G  VAVLG+G +G  AV  AR  G  + + I ++P K+E  +  G  + +
Sbjct: 153 SALRDAGPRPGERVAVLGIGGLGHLAVQYARAMG-FETVAITRSPDKRELARKLGADEVV 211

Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM 260
           +       S +EL +    G G D         +    AL   + G G+++++G+     
Sbjct: 212 D-------SGAELDEQAAAG-GADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPP 262

Query: 261 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLD 294
              ++  L    +++ G+T GG     DL   LD
Sbjct: 263 FSPDIFPLIMKRQSIAGSTHGGRA---DLQEALD 293

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 73.3 bits (181), Expect = 1e-14
 Identities = 69/259 (26%), Positives = 106/259 (40%), Gaps = 49/259 (18%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYI-----GECKECENCTSEMTNLCLKYPIALNGLMLDST 86
            V + G+ V   K GD V+PT+      G        T+E     L       G  +D  
Sbjct: 68  EVVAVGEGVTRFKVGDRVVPTFFPNWLDGPP------TAEDEASAL-------GGPIDGV 114

Query: 87  SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 146
                               EY+V+    +V+    +   +A+ L C   T + A +   
Sbjct: 115 LA------------------EYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLG 156

Query: 147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKII--GIDKNPWKKEKGKAFGMTDFINPDD 204
            ++ G +V V G G V L A+  A+  GA  I     D+   K E+ KA G    IN   
Sbjct: 157 PLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDE---KLERAKALGADHVINYRT 213

Query: 205 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDAMVP 262
            P+    E V  +T G GVD+  E  G P  L+++++    G G + +IG   G +A  P
Sbjct: 214 TPD--WGEEVLKLTGGRGVDHVVEVGG-PGTLAQSIKAVAPG-GVISLIGFLSGFEA--P 267

Query: 263 LNVIALACGGRTLKGTTFG 281
           + ++ L   G TL+G   G
Sbjct: 268 VLLLPLLTKGATLRGIAVG 286

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 69.7 bits (171), Expect = 2e-13
 Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 37/262 (14%)

Query: 32  VVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 90
           +V+  G  V  +K GD V I  +   C  CE CT+    LC       N       +  +
Sbjct: 64  IVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRS---VKN-------AGYT 113

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
           V G            +E  ++ A+Y VKV   +DP+ AS ++C   T Y A  K + ++ 
Sbjct: 114 VDG----------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKP 162

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN--K 208
           G  +A+ G G +G  A+  A+    AK+I +D N  K    K  G    IN     +  K
Sbjct: 163 GQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAK 222

Query: 209 SISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA 267
            I E   G  H   V      T V  +  ++A++  + G G+V+ +G+  ++M  L++  
Sbjct: 223 IIQEKTGGA-HAAVV------TAVAKAAFNQAVDAVRAG-GRVVAVGLPPESM-DLSIPR 273

Query: 268 LACGGRTLKGTTFGGIKTKSDL 289
           L   G  + G+  G   T+ DL
Sbjct: 274 LVLDGIEVVGSLVG---TRQDL 292

Length = 338

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 67.9 bits (166), Expect = 8e-13
 Identities = 53/219 (24%), Positives = 84/219 (38%), Gaps = 31/219 (14%)

Query: 23  FSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 82
           FSG       VE+ G  V ++  GD V    +  C  C  C     +LC KY        
Sbjct: 61  FSGY------VEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFI----- 109

Query: 83  LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA 142
               SR                 +EY+V+    +  +   +   D +F+    T G   A
Sbjct: 110 ---GSR------------RDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGL-HA 152

Query: 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 202
           +  A+  +G +V ++G GT+GL A+  A   GA  +  ID N  K    K+ G     N 
Sbjct: 153 FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNS 212

Query: 203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241
            +     I  +++ +     +    E  GVP  +  A+E
Sbjct: 213 REMSAPQIQSVLRELRFDQLI---LETAGVPQTVELAIE 248

Length = 347

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 78/306 (25%), Positives = 129/306 (42%), Gaps = 35/306 (11%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G +V G+VVE  G +V +   GDIV +   +G C EC  C S++   C K   + N +  
Sbjct: 68  GHEVVGEVVE-VGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYT 126

Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 143
           D        G+     F+ +     MV+D  +VVK+   + P  A+ L C   T Y    
Sbjct: 127 D--------GKPTQGGFASA-----MVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLS 173

Query: 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
                + G    +LGLG VG   V  A+  G    +    +  ++E  +  G  D++   
Sbjct: 174 HFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSS 233

Query: 204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 263
           D     + E    +      DY  +   V   L   L   K+  GK+I++GV      PL
Sbjct: 234 DA--AEMQEAADSL------DYIIDTVPVFHPLEPYLSLLKL-DGKLILMGV---INTPL 281

Query: 264 NVIA--LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321
             +   L  G + + G+  G +K   +   +L+ CK K       +   VK++ ++ A +
Sbjct: 282 QFVTPMLMLGRKVITGSFIGSMK---ETEEMLEFCKEKGL---TSMIEVVKMDYVNTAFE 335

Query: 322 LLKQPD 327
            L++ D
Sbjct: 336 RLEKND 341

Length = 357

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 65.7 bits (160), Expect = 5e-12
 Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 32/298 (10%)

Query: 32  VVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 90
           +V   G  VK+ KEGD V +   +G CK CE+C  ++ N C K     N +  D      
Sbjct: 77  IVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHD------ 130

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
             G K Y       +S+ +V+D ++V++   ++     + L C   T Y         E 
Sbjct: 131 --GTKNY-----GGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEP 183

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKS 209
           G  + V GLG +G  AV   +  G  K+  I  +  K+++     G   F+   D P K 
Sbjct: 184 GKHLGVAGLGGLGHVAVKIGKAFG-LKVTVISSSSNKEDEAINRLGADSFLVSTD-PEK- 240

Query: 210 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALA 269
               +K     M  DY  +       L   L   KV  GK+I +G+  +  + L +  L 
Sbjct: 241 ----MKAAIGTM--DYIIDTVSAVHALGPLLGLLKV-NGKLITLGLP-EKPLELPIFPLV 292

Query: 270 CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
            G + + G+  GGIK   +   +LD C          L   ++++EI+ A++ L + D
Sbjct: 293 LGRKLVGGSDIGGIKETQE---MLDFCAKHNITADIEL---IRMDEINTAMERLAKSD 344

Length = 360

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 64.1 bits (156), Expect = 2e-11
 Identities = 73/245 (29%), Positives = 108/245 (44%), Gaps = 37/245 (15%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G +++G+V+E  G +V+ +K GDIV   +   C  C NC    T +CL    A       
Sbjct: 66  GHEITGEVIEK-GRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPA------- 117

Query: 85  STSRMSVRGQKLYHIFSCSTW----SEY-MVIDANYVVKVDPSIDPS-----DASFLSCG 134
                  R    Y       W    SEY MV  A++ +   P  D +     D + LS  
Sbjct: 118 -------RAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDI 170

Query: 135 FTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF 194
           F TGY  A   A V  GS+V + G G VGL A   A++ GAA +I  D NP +  + ++F
Sbjct: 171 FPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSF 229

Query: 195 GM-TDFINPDDEPNKSISELVKGITHGMGVDYC-FECTG--------VPS-LLSEALETT 243
           G  T  ++ D    + I +++        VD   FE  G         P+ +L+  +E T
Sbjct: 230 GCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVT 289

Query: 244 KVGKG 248
           +VG  
Sbjct: 290 RVGGA 294

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 62.1 bits (152), Expect = 7e-11
 Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 55/231 (23%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G++V+G VVE+ G+ V   K GD V                          +AL G    
Sbjct: 62  GSEVAG-VVEAVGEGVTGFKVGDRV--------------------------VALTGQ--- 91

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 144
                               ++E +V+ A  V  +   +   +A+ L   + T Y A  +
Sbjct: 92  ------------------GGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVR 133

Query: 145 EAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
            A+++ G +V VLG  G VGL AV  A+  G A++I    +  K    +A G    I+  
Sbjct: 134 RARLQPGETVLVLGAAGGVGLAAVQLAKALG-ARVIAAASSEEKLALARALGADHVIDYR 192

Query: 204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 254
           D     + E VK +T G GVD  ++  G   +   +L +   G G+++VIG
Sbjct: 193 DPD---LRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWG-GRLLVIG 238

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 18/260 (6%)

Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 143
              S + V GQ++  +    TW EY+V  A+ ++ V  SI    A+ L     T +    
Sbjct: 73  SGVSGLLV-GQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLT 131

Query: 144 KEAKVEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 202
           +  K+  G  V        VG   +  A++ G  K I + +   + E+ KA G  + I+ 
Sbjct: 132 EYLKLPPGDWVIQNAANSAVGRMLIQLAKLLG-FKTINVVRRDEQVEELKALGADEVIDS 190

Query: 203 DDEPNKSISELVKGITHGMGVDYCFECTG--VPSLLSEALETTKVGKGKVIVIGVGVDAM 260
             E    +++ VK  T G G     +  G    + L+ +L       G ++  G+     
Sbjct: 191 SPE---DLAQRVKEATGGAGARLALDAVGGESATRLARSLRPG----GTLVNYGLLSGEP 243

Query: 261 VPLNVIALACGGRTLKG---TTFGGIKTKSDLPTLLDKCKNK--EFKLHQLLTHHVKLEE 315
           VP           T++G     +    TK        +         L   +     LE+
Sbjct: 244 VPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLED 303

Query: 316 IDKAIQLLKQPDCV-KVLIT 334
            ++A+   +QP    KVL+T
Sbjct: 304 FEEAVAAAEQPGRGGKVLLT 323

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 61.0 bits (149), Expect = 1e-10
 Identities = 71/306 (23%), Positives = 117/306 (38%), Gaps = 51/306 (16%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G ++ G+V    G  V     GD V +P     C EC  C S   NLC            
Sbjct: 63  GHEIVGRVEA-VGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLC-DNARF------ 114

Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 143
             T   +V G           ++EYMV D  +   +    D  +A+ L C    GY  A 
Sbjct: 115 --TGY-TVDG----------GYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYR-AL 160

Query: 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
           K A ++ G  + + G G     A+  AR  G A++    ++   +E  +  G     + D
Sbjct: 161 KLAGLKPGQRLGLYGFGASAHLALQIARYQG-AEVFAFTRSGEHQELARELGADWAGDSD 219

Query: 204 DEPNKSI-SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 262
           D P + + + ++            F    V +L+  AL   K G G+V++ G+ +  +  
Sbjct: 220 DLPPEPLDAAII------------F--APVGALVPAALRAVKKG-GRVVLAGIHMSDIPA 264

Query: 263 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHH--VKLEEIDKAI 320
            +   L  G +T++        T+ D    L      E  +           LEE ++A+
Sbjct: 265 FD-YELLWGEKTIRSVANL---TRQDGEEFLKLA--AEIPIK---PEVETYPLEEANEAL 315

Query: 321 QLLKQP 326
           Q LK+ 
Sbjct: 316 QDLKEG 321

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 59.1 bits (144), Expect = 6e-10
 Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 104 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTV 162
           T++EY ++ A  VVK+   +   +A+ L   + T YGA  + A +  G SV +     +V
Sbjct: 98  TYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSV 157

Query: 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMG 222
           GL A+  A   G A +I   +   K++   A G    I  D+E    +   V  IT G G
Sbjct: 158 GLAAIQIANAAG-ATVIATTRTSEKRDALLALGAAHVIVTDEED---LVAEVLRITGGKG 213

Query: 223 VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG 282
           VD  F+  G P   ++  +    G G ++V G       P  + A      T +G +   
Sbjct: 214 VDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDE 271

Query: 283 I 283
           I
Sbjct: 272 I 272

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 58.8 bits (143), Expect = 8e-10
 Identities = 59/276 (21%), Positives = 102/276 (36%), Gaps = 76/276 (27%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G +V G++    G+ V   K GD V +  + G C  C+ C       C    +   G+  
Sbjct: 59  GHEVVGRIDA-VGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKV--TGVTR 115

Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 143
           D                    ++EYM+  A  + ++   +D ++A+ L C   T + A  
Sbjct: 116 DGG------------------YAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL- 156

Query: 144 KEAKVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 201
           + +  + G  VAV G+G  GLG  AV  A   G  + + I +   K +  +  G   +I+
Sbjct: 157 RNSGAKPGDLVAVQGIG--GLGHLAVQYAAKMG-FRTVAISRGSDKADLARKLGAHHYID 213

Query: 202 PDDE-------------------PN-KSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241
              E                   PN K+IS LV G+                        
Sbjct: 214 TSKEDVAEALQELGGAKLILATAPNAKAISALVGGLAPR--------------------- 252

Query: 242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKG 277
                 GK++++G      V ++ + L  G +++ G
Sbjct: 253 ------GKLLILGA-AGEPVAVSPLQLIMGRKSIHG 281

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 58.9 bits (142), Expect = 9e-10
 Identities = 75/311 (24%), Positives = 128/311 (41%), Gaps = 38/311 (12%)

Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNG 80
           +  G ++ G +    G  V + KEGD V +   IG C+ CE+C  ++ N C K     N 
Sbjct: 62  IIPGHEIVG-IATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNS 120

Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD--ASFLSCGFTTG 138
              D T     R Q  Y        S+ +V+D  +V+ + P   PSD  A  L  G T  
Sbjct: 121 RSSDGT-----RNQGGY--------SDVIVVDHRFVLSI-PDGLPSDSGAPLLCAGITVY 166

Query: 139 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 198
               +     E G  + V GLG +G  AV   +  G    +    +  ++E     G   
Sbjct: 167 SPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADS 226

Query: 199 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 258
           F+   D      S+ +K     M  D+  +       L       KV  GK++ +G+  +
Sbjct: 227 FLVTTD------SQKMKEAVGTM--DFIIDTVSAEHALLPLFSLLKV-SGKLVALGLP-E 276

Query: 259 AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLT--HHVKLEEI 316
             + L +  L  G + + G+  GG+K   +   +L+ C       H++++    +K+ +I
Sbjct: 277 KPLDLPIFPLVLGRKMVGGSQIGGMKETQE---MLEFCAK-----HKIVSDIELIKMSDI 328

Query: 317 DKAIQLLKQPD 327
           + A+  L + D
Sbjct: 329 NSAMDRLAKSD 339

Length = 375

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 57.2 bits (139), Expect = 3e-09
 Identities = 60/234 (25%), Positives = 83/234 (35%), Gaps = 46/234 (19%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VVE  GD    +  GD+V+PT      +C NC     + C              T   + 
Sbjct: 68  VVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFC-------------ETGEYTE 113

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFL----SC---GFTTGYGAAWK 144
           RG K  H F      EY V D  Y+VKV PS+  +D   L    S           A  K
Sbjct: 114 RGIKGLHGFM----REYFVDDPEYLVKVPPSL--ADVGVLLEPLSVVEKAIEQAE-AVQK 166

Query: 145 EAKVEKGSSVAVLGLGTVGL-----GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 199
                      VLG G +GL       + G  ++   +    D    K +  +  G T +
Sbjct: 167 RLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNR---RDPPDPKADIVEELGAT-Y 222

Query: 200 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 253
           +N    P       V  +      D   E TGVP L  EAL    +    V+++
Sbjct: 223 VNSSKTP-------VAEVKLVGEFDLIIEATGVPPLAFEALP--ALAPNGVVIL 267

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 52.6 bits (127), Expect = 6e-09
 Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 21/95 (22%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G + +G V E  G  V  +K GD V+   +  C +C  C     NLC             
Sbjct: 35  GHEGAGIVEE-VGPGVTGLKVGDRVVVYPLIPCGKCAACREGRENLC------------- 80

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV 119
                     K   +     ++EY+V+ A  +V +
Sbjct: 81  -------PNGKFLGVHLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 32/238 (13%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           ++E  G EVK +  GD V       C  C  C     NLC                 M  
Sbjct: 84  IIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLC---------------PEMKF 128

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAAWKEAKV 148
                 H     + +  +V  A+   K+  ++   + +    LS G       A + A +
Sbjct: 129 FATPPVH----GSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGV-----HACRRANI 179

Query: 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
              ++V V+G G +GL  +  AR  GA +I+ +D +  +    K  G  + +        
Sbjct: 180 GPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIED 239

Query: 209 SISELVKGITHGMG--VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM-VPL 263
             SE+ + I   MG  +D  F+C G    +S ALE T+ G GKV ++G+G + M VPL
Sbjct: 240 VESEVEE-IQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNEMTVPL 295

Length = 364

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 47/163 (28%), Positives = 68/163 (41%), Gaps = 6/163 (3%)

Query: 93  GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGS 152
           G ++  +     ++EY V    +V+ +       +A+ +   F T +    K   V+KG 
Sbjct: 83  GDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQ 142

Query: 153 SVAV-LGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
           SV +  G   VG  A   A  +GAA II    +  K +  K       I   DE   +  
Sbjct: 143 SVLIHAGASGVGTAAAQLAEKYGAATIITT-SSEEKVDFCKKLAAIILIRYPDEEGFAPK 201

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 254
             VK +T   GV+   +C G  S LSE  E   V  GK IV G
Sbjct: 202 --VKKLTGEKGVNLVLDCVG-GSYLSETAEVLAV-DGKWIVYG 240

Length = 334

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 61/254 (24%), Positives = 98/254 (38%), Gaps = 28/254 (11%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G +V GK+V S    +KE   G  V       C  C+ C S   N C             
Sbjct: 64  GHEVIGKIVHSDSSGLKE---GQTVAINPSKPCGHCKYCLSHNENQC------------- 107

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 144
             + M   G  +Y       ++ Y V+D    +      D    +F        + A   
Sbjct: 108 --TTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVAIHAA--H 163

Query: 145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 204
           +A   +G  V V G+G +G   V   +  GAA+I+  D +P      +  G    +NP +
Sbjct: 164 QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN 223

Query: 205 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN 264
           +      +L          D  FE +G PS ++  LE T+  KG ++ +G+G  A     
Sbjct: 224 D------DLDHYKAEKGYFDVSFEVSGHPSSINTCLEVTR-AKGVMVQVGMG-GAPPEFP 275

Query: 265 VIALACGGRTLKGT 278
           ++ L     +LKG+
Sbjct: 276 MMTLIVKEISLKGS 289

Length = 343

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 52.7 bits (127), Expect = 9e-08
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)

Query: 105 WSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG 163
            +EY+ +DA Y+V V   +D ++A  L   + T Y    + AKV  G  V + G  G VG
Sbjct: 94  NAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVG 153

Query: 164 LGAVDGARMHGAAKIIG 180
              ++ A + G A++ G
Sbjct: 154 QALLELALLAG-AEVYG 169

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 49.5 bits (119), Expect = 8e-07
 Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 8/163 (4%)

Query: 104 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTV 162
           T +EY+V+ A+ +V +   +     + L     T Y A +  A  + G +V V G  G V
Sbjct: 98  TAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAV 157

Query: 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMG 222
           G  AV  AR  G A++I    +    E  +  G     N   E    +++ +   T G G
Sbjct: 158 GHAAVQLARWAG-ARVIATASSAEGAELVRQAGADAVFNYRAE---DLADRILAATAGQG 213

Query: 223 VDYCFECTGVPSLLSEALETTKVGKGKVIVIG-VGVDAMVPLN 264
           VD   E     + L++ L+    G G+++V G  G+   +P+N
Sbjct: 214 VDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGGLRGTIPIN 254

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 49.5 bits (119), Expect = 9e-07
 Identities = 44/230 (19%), Positives = 81/230 (35%), Gaps = 57/230 (24%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G  V+G VV + G  V   K GD V                                   
Sbjct: 64  GHDVAG-VVVAVGPGVTGFKVGDEVF---------------------------------- 88

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 144
             +  +  G           ++EY+V+ A+ +     ++   +A+ L     T + A ++
Sbjct: 89  GMTPFTRGG----------AYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFE 138

Query: 145 EAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
              ++ G +V + G  G VG  AV  A+  G A++I         +  ++ G  + I+  
Sbjct: 139 LGGLKAGQTVLIHGAAGGVGSFAVQLAKARG-ARVIATASAA-NADFLRSLGADEVIDYT 196

Query: 204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI 253
                      +      GVD   +  G  + L+ +L   K G G+++ I
Sbjct: 197 K-------GDFERAAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSI 237

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 6/129 (4%)

Query: 104 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTV 162
           +++EY V+DA  V+ +  S+   +A+ L C   T Y A +K+ ++E G ++ + G  G V
Sbjct: 95  SFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGV 154

Query: 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMG 222
           G  AV  A+  G   I    K  +  E  K+ G    I   D  ++ + E +K IT G G
Sbjct: 155 GSFAVQLAKRAGLRVITTCSKRNF--EYVKSLGADHVI---DYNDEDVCERIKEITGGRG 209

Query: 223 VDYCFECTG 231
           VD   +  G
Sbjct: 210 VDAVLDTVG 218

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 65/306 (21%), Positives = 114/306 (37%), Gaps = 36/306 (11%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           V+++ G+ V   + G+ V    +  C  C  C+    N+C               + + V
Sbjct: 64  VIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVC---------------TSLVV 108

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
            G     +     +SEY V+ A    ++  +I    A  +   FT             + 
Sbjct: 109 LG-----VHRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVE-PFTIAANVT-GRTGPTEQ 161

Query: 152 SSVAVLGLGTVGLGAVDG-ARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
               + G G VGL  V     ++    +I  D+   +    K  G    IN   EP    
Sbjct: 162 DVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEA 221

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALAC 270
            E  KGI   + +D        PS+L EA+ T      +++++G   +   P  ++    
Sbjct: 222 LE-EKGIKPTLIID----AACHPSILEEAV-TLASPAARIVLMGFSSE---PSEIVQQGI 272

Query: 271 GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK--QPDC 328
            G+ L  + F      +  P ++D          +L+TH    + +  AI+L +  Q  C
Sbjct: 273 TGKEL--SIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHC 330

Query: 329 VKVLIT 334
            KVL+T
Sbjct: 331 CKVLLT 336

Length = 339

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 43.6 bits (104), Expect = 8e-05
 Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 11/133 (8%)

Query: 103 STWSEYMVIDANYVVKVDPSIDPSDA--SFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGL 159
             ++EY V+ A+ +VK+   I    A    L  G T  Y    +E   V+ G +V V   
Sbjct: 89  GAYAEYRVVPASRLVKLPDGISDETAAALLLQ-GLTAHYLL--RETYPVKPGDTVLVHAA 145

Query: 160 -GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT 218
            G VGL     A+  G A +IG   +  K E  +A G    IN  DE      E V+ IT
Sbjct: 146 AGGVGLLLTQWAKALG-ATVIGTVSSEEKAELARAAGADHVINYRDE---DFVERVREIT 201

Query: 219 HGMGVDYCFECTG 231
            G GVD  ++  G
Sbjct: 202 GGRGVDVVYDGVG 214

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 42.4 bits (101), Expect = 2e-04
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 15/178 (8%)

Query: 107 EYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT--VGL 164
           EY+V+ A  ++ V   +   +A+ L   F T +   ++   ++ G +V + G G   VG 
Sbjct: 96  EYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHG-GASGVGT 154

Query: 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD 224
            A+  A+  GA ++I    +  K E  +A G    IN   E     +E VK  T G GVD
Sbjct: 155 AAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRTE---DFAEEVKEATGGRGVD 210

Query: 225 YCFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDAMVPLNVIALACGGR-TLKGTT 279
              +  G    L+  L       G++++IG+  G  A + L  +      R TL G+T
Sbjct: 211 VILDMVG-GDYLARNLRALAPD-GRLVLIGLLGGAKAELDLAPL---LRKRLTLTGST 263

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 9/129 (6%)

Query: 100 FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-G 158
            +   ++ ++ +DA  VVK+  S+   +A+ L   + T Y A    A+++KG SV +   
Sbjct: 58  LAPGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAA 117

Query: 159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI- 217
            G VG  A+  A+  G A++     +  K+E    F        D   +        GI 
Sbjct: 118 AGGVGQAAIQLAQHLG-AEVFATVGSEEKRE----FLRELGGPVDHIFSSRDLSFADGIL 172

Query: 218 --THGMGVD 224
             T G GVD
Sbjct: 173 RATGGRGVD 181

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 73/329 (22%), Positives = 111/329 (33%), Gaps = 86/329 (26%)

Query: 24  SGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
            G   +G VVE  G  V   K GD V                              G + 
Sbjct: 58  LGCDFAGTVVE-VGSGVTRFKVGDRVA-----------------------------GFVH 87

Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTT------ 137
                    G           + EY+V DA+   K+  +I   +A+ L  G  T      
Sbjct: 88  GGNPNDPRNG----------AFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALF 137

Query: 138 ---GYGAAW-KEAKVEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGI--DKNPWKKEK 190
              G      K +   KG  V + G  + VG  A+  A++ G  K+I     KN    + 
Sbjct: 138 QKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAG-YKVITTASPKN---FDL 193

Query: 191 GKAFGMTDFIN---PDDEPNKSISELVKGITHGMGVDYCFECTGVPS---LLSEALETTK 244
            K+ G     +   PD        E ++  T G  + Y  +C   P    L +EAL  + 
Sbjct: 194 VKSLGADAVFDYHDPDVV------EDIRAATGG-KLRYALDCISTPESAQLCAEALGRSG 246

Query: 245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSD--------LPTLLDKC 296
            GK  V ++ V  +      V         L  T FG I    +        LP LL++ 
Sbjct: 247 GGKL-VSLLPVPEETEPRKGVKV----KFVLGYTVFGEIPEDREFGEVFWKYLPELLEE- 300

Query: 297 KNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325
              + K H +      LE + + + LL++
Sbjct: 301 --GKLKPHPVRVVEGGLEGVQEGLDLLRK 327

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 40.4 bits (96), Expect = 7e-04
 Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 13/131 (9%)

Query: 100 FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-- 157
            +   ++  +V DA  VV +       +A+ +   F T Y A    A++  G S  VL  
Sbjct: 53  LAPGAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGES--VLIH 110

Query: 158 -GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD---DEPNKSISEL 213
              G VG  A+  AR  G A++     +P K++  +A G    I  D      + S ++ 
Sbjct: 111 AAAGGVGQAAIQLARHLG-AEVFATAGSPEKRDFLRALG----IPDDHIFSSRDLSFADE 165

Query: 214 VKGITHGMGVD 224
           +   T G GVD
Sbjct: 166 ILRATGGRGVD 176

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 61/304 (20%), Positives = 100/304 (32%), Gaps = 61/304 (20%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G   +G  V + G  V   K GD V                                   
Sbjct: 63  GMDFAG-EVVAVGSGVTRFKVGDEVF---------------------------------- 87

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 144
              R+  +G            +EY+V   + + K    +   +A+ L     T   A   
Sbjct: 88  --GRLPPKGGG--------ALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRD 137

Query: 145 EAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
             KV+ G  V + G  G VG  AV  A+  G A + G+  +    E  ++ G  + I+  
Sbjct: 138 AGKVKPGQRVLINGASGGVGTFAVQIAKALG-AHVTGVC-STRNAELVRSLGADEVIDYT 195

Query: 204 DEPNKSISELVKGITHGMGV-DYCFECTG-VPSLLSEALETTKVGKGKVIVIGVGVDAMV 261
            E           +T G    D  F+  G  P  L  A    K G G+ + +G G   ++
Sbjct: 196 TED-------FVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLL 247

Query: 262 PLNVIALACGGRTLKG-TTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320
            + ++     G   +    F       DL  L +  +  + K    +     LE+  +A 
Sbjct: 248 LVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPV--IDSVYPLEDAPEAY 305

Query: 321 QLLK 324
           + LK
Sbjct: 306 RRLK 309

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 13/94 (13%)

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           G  VAVLG G +GL       + G   ++ + ++  K    +  G  + + PD+  ++  
Sbjct: 156 GDKVAVLGDGKLGLLIAQVLALTG-PDVVLVGRHSEKLALARRLG-VETVLPDEAESE-- 211

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244
                    G G D   E TG PS L  AL   +
Sbjct: 212 ---------GGGFDVVVEATGSPSGLELALRLVR 236

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 13/159 (8%)

Query: 101 SCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFT--TGYGAAWKEAKVEKGSSVAVLG 158
             S W EY + D   + K+DPS  P  A     G    T Y       + + G +V V  
Sbjct: 99  GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSA 158

Query: 159 L-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-IN-PDDEPNKSISELVK 215
             G VG      A++ G  +++GI     K +        D  I+   ++  +++ E   
Sbjct: 159 AAGAVGSVVGQIAKLKG-CRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEAC- 216

Query: 216 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG 254
                 G+D  FE  G   +L   L    +   ++ V G
Sbjct: 217 ----PKGIDVYFENVGGE-VLDAVLPLLNL-FARIPVCG 249

Length = 340

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 24/108 (22%), Positives = 32/108 (29%), Gaps = 46/108 (42%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
            V   G  VK +K GD VIP   G                                    
Sbjct: 74  EVVKVGSGVKSLKPGDWVIPLRPG------------------------------------ 97

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGY 139
                       TW  + V+ A+ ++KV   +DP  A+ LS    T Y
Sbjct: 98  ----------LGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAY 135

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	335
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	99.98
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.98
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.98
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	99.98
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.97
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	99.97
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	99.97
PTZ00354	334	alcohol dehydrogenase; Provisional	99.97
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	99.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.97
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.97
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.97
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	99.97
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	99.96
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.96
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.96
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.96
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.96
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.96
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.96
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.96
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.96
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.95
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.95
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.95
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.95
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.95
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.95
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.95
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.94
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.94
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.94
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.94
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.93
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.92
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.78
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.7
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.49
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.38
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.29
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.55
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.55
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.45
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.31
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.3
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.19
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.15
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.14
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.12
PLN02494	477	adenosylhomocysteinase	97.99
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.8
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.77
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.76
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.75
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.74
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.7
PRK08324	681	short chain dehydrogenase; Validated	97.61
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.59
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.56
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	97.39
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.3
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.25
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.25
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.23
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.19
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.17
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.11
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	97.11
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.08
PRK04148	134	hypothetical protein; Provisional	97.05
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.04
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.02
PRK05993	277	short chain dehydrogenase; Provisional	96.98
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.95
TIGR00438	188	rrmJ cell division protein FtsJ.	96.94
PRK08177	225	short chain dehydrogenase; Provisional	96.92
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.91
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.9
PRK12742	237	oxidoreductase; Provisional	96.88
PRK05693	274	short chain dehydrogenase; Provisional	96.87
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.85
PRK00536	262	speE spermidine synthase; Provisional	96.83
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.81
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.81
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.8
PRK14967	223	putative methyltransferase; Provisional	96.79
PRK06139	330	short chain dehydrogenase; Provisional	96.76
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.75
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.74
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.73
PRK08017	256	oxidoreductase; Provisional	96.72
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.68
PLN02366	308	spermidine synthase	96.68
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.68
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.68
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.65
PRK06182	273	short chain dehydrogenase; Validated	96.64
PRK07326	237	short chain dehydrogenase; Provisional	96.64
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.63
PRK07060	245	short chain dehydrogenase; Provisional	96.62
PLN03209	576	translocon at the inner envelope of chloroplast su	96.61
PRK12939	250	short chain dehydrogenase; Provisional	96.59
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.55
PRK07825	273	short chain dehydrogenase; Provisional	96.53
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.51
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.5
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.47
PRK07806	248	short chain dehydrogenase; Provisional	96.46
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.45
PRK06057	255	short chain dehydrogenase; Provisional	96.44
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.44
PRK08339	263	short chain dehydrogenase; Provisional	96.44
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.43
PRK07109	334	short chain dehydrogenase; Provisional	96.43
PRK00811	283	spermidine synthase; Provisional	96.43
PRK08265	261	short chain dehydrogenase; Provisional	96.43
PRK07904	253	short chain dehydrogenase; Provisional	96.4
PRK06949	258	short chain dehydrogenase; Provisional	96.38
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.37
PRK06196	315	oxidoreductase; Provisional	96.36
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.35
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.35
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.33
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.33
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.32
PRK05872	296	short chain dehydrogenase; Provisional	96.31
COG4122	219	Predicted O-methyltransferase [General function pr	96.31
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.3
PRK07831	262	short chain dehydrogenase; Provisional	96.29
PRK06953	222	short chain dehydrogenase; Provisional	96.28
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.28
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.28
PRK11207	197	tellurite resistance protein TehB; Provisional	96.28
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.27
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.27
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.24
PRK12829	264	short chain dehydrogenase; Provisional	96.24
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.23
PRK05866	293	short chain dehydrogenase; Provisional	96.22
PRK04457	262	spermidine synthase; Provisional	96.22
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.22
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.21
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.21
PRK09072	263	short chain dehydrogenase; Provisional	96.19
PRK06500	249	short chain dehydrogenase; Provisional	96.16
PRK08618	325	ornithine cyclodeaminase; Validated	96.15
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.14
PRK06180	277	short chain dehydrogenase; Provisional	96.13
PRK09291	257	short chain dehydrogenase; Provisional	96.13
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	96.12
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.11
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.1
PRK07814	263	short chain dehydrogenase; Provisional	96.1
PRK07677	252	short chain dehydrogenase; Provisional	96.1
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.1
PRK05867	253	short chain dehydrogenase; Provisional	96.1
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.09
PLN02780	320	ketoreductase/ oxidoreductase	96.09
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.07
PRK01581	374	speE spermidine synthase; Validated	96.07
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.05
PRK08267	260	short chain dehydrogenase; Provisional	96.04
PRK06841	255	short chain dehydrogenase; Provisional	96.04
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.02
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.01
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.01
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.99
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.98
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.96
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.95
PRK07062	265	short chain dehydrogenase; Provisional	95.94
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.93
PRK07832	272	short chain dehydrogenase; Provisional	95.93
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.9
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	95.9
PRK07024	257	short chain dehydrogenase; Provisional	95.87
PRK08862	227	short chain dehydrogenase; Provisional	95.86
COG2910	211	Putative NADH-flavin reductase [General function p	95.86
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.86
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.86
PRK07478	254	short chain dehydrogenase; Provisional	95.85
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.79
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.78
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.77
PRK05717	255	oxidoreductase; Validated	95.76
PRK07576	264	short chain dehydrogenase; Provisional	95.76
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.75
PRK06125	259	short chain dehydrogenase; Provisional	95.73
PRK06128	300	oxidoreductase; Provisional	95.72
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.72
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.71
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.7
PRK07454	241	short chain dehydrogenase; Provisional	95.7
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.69
PRK06194	287	hypothetical protein; Provisional	95.68
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.67
PRK07402	196	precorrin-6B methylase; Provisional	95.67
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.66
PRK06483	236	dihydromonapterin reductase; Provisional	95.66
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.66
PRK08703	239	short chain dehydrogenase; Provisional	95.63
PLN00203	519	glutamyl-tRNA reductase	95.63
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.61
PRK12367	245	short chain dehydrogenase; Provisional	95.61
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.6
PRK06198	260	short chain dehydrogenase; Provisional	95.6
PRK05884	223	short chain dehydrogenase; Provisional	95.6
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.6
PRK08643	256	acetoin reductase; Validated	95.59
PRK12828	239	short chain dehydrogenase; Provisional	95.57
CHL00194	317	ycf39 Ycf39; Provisional	95.57
PLN02476	278	O-methyltransferase	95.55
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.55
PRK08628	258	short chain dehydrogenase; Provisional	95.54
PRK07340	304	ornithine cyclodeaminase; Validated	95.54
PRK06172	253	short chain dehydrogenase; Provisional	95.54
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.53
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.51
PRK06138	252	short chain dehydrogenase; Provisional	95.51
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.51
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.51
PRK07890	258	short chain dehydrogenase; Provisional	95.5
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.5
PLN02823	336	spermine synthase	95.5
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	95.5
PRK06181	263	short chain dehydrogenase; Provisional	95.48
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.48
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.47
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.47
PRK07063	260	short chain dehydrogenase; Provisional	95.45
PRK06101	240	short chain dehydrogenase; Provisional	95.44
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.44
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.44
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.43
PRK09186	256	flagellin modification protein A; Provisional	95.43
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.42
PRK05876	275	short chain dehydrogenase; Provisional	95.41
PRK07774	250	short chain dehydrogenase; Provisional	95.4
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.38
PRK05875	276	short chain dehydrogenase; Provisional	95.38
PRK07035	252	short chain dehydrogenase; Provisional	95.38
PRK08589	272	short chain dehydrogenase; Validated	95.37
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.37
PRK06849	389	hypothetical protein; Provisional	95.36
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.35
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	95.34
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.33
PRK06914	280	short chain dehydrogenase; Provisional	95.32
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.32
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.31
PRK06484	520	short chain dehydrogenase; Validated	95.31
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.31
PRK08328	231	hypothetical protein; Provisional	95.29
PRK05854	313	short chain dehydrogenase; Provisional	95.29
PRK06482	276	short chain dehydrogenase; Provisional	95.28
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.28
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.28
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.27
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.27
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	95.24
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.22
PRK08317	241	hypothetical protein; Provisional	95.22
PRK06179	270	short chain dehydrogenase; Provisional	95.21
PRK07577	234	short chain dehydrogenase; Provisional	95.2
PRK08263	275	short chain dehydrogenase; Provisional	95.19
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	95.19
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.18
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.18
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.17
PRK06197	306	short chain dehydrogenase; Provisional	95.17
KOG0725	270	consensus Reductases with broad range of substrate	95.17
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.17
PRK08251	248	short chain dehydrogenase; Provisional	95.16
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.16
PRK07074	257	short chain dehydrogenase; Provisional	95.16
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.16
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.15
PRK07417	279	arogenate dehydrogenase; Reviewed	95.14
PLN02244	340	tocopherol O-methyltransferase	95.14
PRK06114	254	short chain dehydrogenase; Provisional	95.14
PRK08223	287	hypothetical protein; Validated	95.14
PRK07574	385	formate dehydrogenase; Provisional	95.13
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.1
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.1
PRK06940	275	short chain dehydrogenase; Provisional	95.07
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.07
PRK07067	257	sorbitol dehydrogenase; Provisional	95.06
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	95.06
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	95.05
PLN02253	280	xanthoxin dehydrogenase	95.05
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.04
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.04
PRK08226	263	short chain dehydrogenase; Provisional	95.04
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.02
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.02
PRK07985	294	oxidoreductase; Provisional	95.01
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	95.01
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	95.0
PLN03075	296	nicotianamine synthase; Provisional	95.0
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	94.99
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	94.99
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.98
PRK09242	257	tropinone reductase; Provisional	94.97
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	94.97
PRK07856	252	short chain dehydrogenase; Provisional	94.97
PRK06398	258	aldose dehydrogenase; Validated	94.97
PRK08264	238	short chain dehydrogenase; Validated	94.96
PRK10538	248	malonic semialdehyde reductase; Provisional	94.96
PLN00016	378	RNA-binding protein; Provisional	94.95
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.94
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.92
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.92
PRK06484	520	short chain dehydrogenase; Validated	94.92
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.91
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	94.9
PLN02256	304	arogenate dehydrogenase	94.9
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.9
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.89
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	94.89
PRK08303	305	short chain dehydrogenase; Provisional	94.88
PRK06720	169	hypothetical protein; Provisional	94.86
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.86
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.86
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.86
PRK06153	393	hypothetical protein; Provisional	94.85
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	94.85
PRK12747	252	short chain dehydrogenase; Provisional	94.85
COG4106	257	Tam Trans-aconitate methyltransferase [General fun	94.84
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	94.84
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.83
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.82
PRK08300	302	acetaldehyde dehydrogenase; Validated	94.79
PRK07102	243	short chain dehydrogenase; Provisional	94.77
PLN03139	386	formate dehydrogenase; Provisional	94.76
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	94.76
PRK10669	558	putative cation:proton antiport protein; Provision	94.76
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	94.76
PRK14982	340	acyl-ACP reductase; Provisional	94.74
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	94.73
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.73
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	94.73
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.7
PRK07775	274	short chain dehydrogenase; Provisional	94.7
PLN02589	247	caffeoyl-CoA O-methyltransferase	94.7
PRK05650	270	short chain dehydrogenase; Provisional	94.68
PRK13243	333	glyoxylate reductase; Reviewed	94.68
PF07021	193	MetW: Methionine biosynthesis protein MetW; InterP	94.67
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.66
PRK07411	390	hypothetical protein; Validated	94.65
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.63
PRK08278	273	short chain dehydrogenase; Provisional	94.61
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	94.6
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.59
TIGR00452	314	methyltransferase, putative. Known examples to dat	94.55
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	94.55
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.53
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.53
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	94.51
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.44
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	94.43
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.42
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.42
PRK10258	251	biotin biosynthesis protein BioC; Provisional	94.36
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.34
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	94.33
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	94.32
PRK07791	286	short chain dehydrogenase; Provisional	94.31
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	94.31
PRK06523	260	short chain dehydrogenase; Provisional	94.31
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.26
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.26
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.25
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	94.23
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.22
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	94.2
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.16
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.15
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	94.14
PRK12746	254	short chain dehydrogenase; Provisional	94.14
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	94.11
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.1
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	94.08
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.08
PRK04266	226	fibrillarin; Provisional	94.07
PRK08219	227	short chain dehydrogenase; Provisional	94.07
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.06
PRK12743	256	oxidoreductase; Provisional	94.05
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.03
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.02
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	94.01
PRK12335	287	tellurite resistance protein TehB; Provisional	93.98
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	93.97
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.97
PRK12937	245	short chain dehydrogenase; Provisional	93.95
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.94
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	93.94
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	93.91
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.91
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	93.9
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	93.88
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	93.88
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.88
PRK08655	437	prephenate dehydrogenase; Provisional	93.83
PRK14903	431	16S rRNA methyltransferase B; Provisional	93.81
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	93.8
cd05313	254	NAD_bind_2_Glu_DH NAD(P) binding domain of glutama	93.78
PRK06701	290	short chain dehydrogenase; Provisional	93.76
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	93.75
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	93.73

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=2.7e-56  Score=388.18  Aligned_cols=322  Identities=39%  Similarity=0.677  Sum_probs=304.7

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-ccccc
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML   83 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~   83 (335)
                      .|++.+.|.+|.+ +|.++| ||. +|+|++||+.|+.+|+||+|+..+...|++|.+|++|.+|+|...+.+. -|.++
T Consensus        42 TD~~~~~G~~p~~-~P~vLG-HEg-AGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~  118 (366)
T COG1062          42 TDAHTLSGDDPEG-FPAVLG-HEG-AGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMP  118 (366)
T ss_pred             cchhhhcCCCCCC-Cceecc-ccc-ccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhccccccc
Confidence            4788899999987 999999 999 9999999999999999999999999999999999999999999766543 57889


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      +|++|++.++...+|+.|+++|++|..+++..+.+++++.+++.++++.|...|.+.+..+.++++++++|.|.|.|++|
T Consensus       119 dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVG  198 (366)
T COG1062         119 DGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVG  198 (366)
T ss_pred             CCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCch-hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~-~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      ++++|-|+..|++++++++.+++|++++++||+++.+|.++   . +..+.++++|++ |+|.+|||+|+...+++++.+
T Consensus       199 laaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~---~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~  274 (366)
T COG1062         199 LAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE---VDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEA  274 (366)
T ss_pred             HHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh---hhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999987   5 699999999998 999999999999999999999


Q ss_pred             hccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      ..+. |+.+.+|.... ...+.+...+. .+.+++|+.+|....+.+++.++++..+|++++.+++++.++|+||+|||+
T Consensus       275 ~~~~-G~~v~iGv~~~~~~i~~~~~~lv-~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~  352 (366)
T COG1062         275 THRG-GTSVIIGVAGAGQEISTRPFQLV-TGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFD  352 (366)
T ss_pred             HhcC-CeEEEEecCCCCceeecChHHee-ccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHH
Confidence            9996 99999998776 67778888888 559999999999888899999999999999999999999999999999999


Q ss_pred             HhcCCCeeeEEEeC
Q 019822          322 LLKQPDCVKVLITI  335 (335)
Q Consensus       322 ~~~~~~~~k~vi~~  335 (335)
                      .|.+++.+|.||.+
T Consensus       353 ~m~~G~~IR~Vi~~  366 (366)
T COG1062         353 LMHEGKSIRSVIRF  366 (366)
T ss_pred             HHhCCceeeEEecC
Confidence            99999999998875

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=2.5e-56  Score=396.76  Aligned_cols=292  Identities=29%  Similarity=0.428  Sum_probs=269.5

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEe-cccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIP-TYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      .|+|.++|.++...+|+|+| ||. +|+|+++|++|++||+||||.+ ++..+|+.|++|++|++|+|++...  .|++.
T Consensus        43 sDlH~~~G~~~~~~~P~ipG-HEi-vG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~--~gy~~  118 (339)
T COG1064          43 TDLHVAKGDWPVPKLPLIPG-HEI-VGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI--TGYTT  118 (339)
T ss_pred             hhhhhhcCCCCCCCCCccCC-cce-EEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccc--cceee
Confidence            59999999999988999999 999 9999999999999999999998 8999999999999999999999777  48888


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      +|                  +|+||+.||+.+++++|+++++++||.+.|+..|+|++| +.++++|+++|+|+|.|++|
T Consensus       119 ~G------------------Gyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlG  179 (339)
T COG1064         119 DG------------------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLG  179 (339)
T ss_pred             cC------------------cceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHH
Confidence            77                  999999999999999999999999999999999999998 55999999999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      .+++|+|+++|+ +|++++++++|++.++++|++++++.++   .++.+.+++.     +|+++|+++ +..++..++.|
T Consensus       180 h~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~---~~~~~~~~~~-----~d~ii~tv~-~~~~~~~l~~l  249 (339)
T COG1064         180 HMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSD---SDALEAVKEI-----ADAIIDTVG-PATLEPSLKAL  249 (339)
T ss_pred             HHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCC---chhhHHhHhh-----CcEEEECCC-hhhHHHHHHHH
Confidence            999999999998 9999999999999999999999999776   6777777653     999999999 77999999999


Q ss_pred             ccCCeEEEEEccCC-CccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          244 KVGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       244 ~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      +++ |+++++|... ....+++.+.++.+++++.|+..++   +.++++++++..++++++.  +.+.++++|+++|++.
T Consensus       250 ~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~  323 (339)
T COG1064         250 RRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYER  323 (339)
T ss_pred             hcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHH
Confidence            998 9999999984 4456688888888999999999886   6899999999999998776  4479999999999999


Q ss_pred             hcCCCee-eEEEeC
Q 019822          323 LKQPDCV-KVLITI  335 (335)
Q Consensus       323 ~~~~~~~-k~vi~~  335 (335)
                      |.+++.. |.||++
T Consensus       324 m~~g~v~gR~Vi~~  337 (339)
T COG1064         324 MEKGKVRGRAVIDM  337 (339)
T ss_pred             HHcCCeeeEEEecC
Confidence            9999875 888864

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.4e-53  Score=363.05  Aligned_cols=326  Identities=44%  Similarity=0.760  Sum_probs=305.4

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc--cccc
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL--NGLM   82 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~--~g~~   82 (335)
                      .|.+.|.|..|...||.|+| ||. +|+|+.+|+.|..+++||+|+..+...|+.|.+|+++..|+|.+.+.+.  .++.
T Consensus        47 TD~~~~~g~~~~~~fP~IlG-HEa-aGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~  124 (375)
T KOG0022|consen   47 TDAYVWSGKDPEGLFPVILG-HEA-AGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMP  124 (375)
T ss_pred             ccceeecCCCccccCceEec-ccc-eeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccc
Confidence            48899999998889999999 999 9999999999999999999999999999999999999999999988764  3344


Q ss_pred             cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                      .+|.+|++-+|...+|+.|..+|+||.+|+...+.++++..+++.++++.|.++|+|.|.++.+++++|+++.|.|.|++
T Consensus       125 ~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~V  204 (375)
T KOG0022|consen  125 YDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGV  204 (375)
T ss_pred             cCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchH
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |+++++-||+.|+++++++|.+++|.+.++++|+++.+|+.+ ......+.++++|++ |+|+-|||+|+..++++++.+
T Consensus       205 GLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d-~~~~i~evi~EmTdg-GvDysfEc~G~~~~m~~al~s  282 (375)
T KOG0022|consen  205 GLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKD-LKKPIQEVIIEMTDG-GVDYSFECIGNVSTMRAALES  282 (375)
T ss_pred             HHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhh-ccccHHHHHHHHhcC-CceEEEEecCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999885 223578889999998 999999999999999999999


Q ss_pred             hccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      ...++|.-+.+|.... ...++.++.+. ++.++.|+.+|.+..+.+++.+.+...++++++..+++|++||+++++||+
T Consensus       283 ~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~  361 (375)
T KOG0022|consen  283 CHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFD  361 (375)
T ss_pred             hhcCCCeEEEEEecCCCcccccchhhhc-cccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHH
Confidence            9998899999998776 77788888887 799999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCeeeEEEeC
Q 019822          322 LLKQPDCVKVLITI  335 (335)
Q Consensus       322 ~~~~~~~~k~vi~~  335 (335)
                      .|.+++.+|-|+.+
T Consensus       362 ll~~GksiR~vl~~  375 (375)
T KOG0022|consen  362 LLHEGKSIRCVLWM  375 (375)
T ss_pred             HHhCCceEEEEEeC
Confidence            99999999988864

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.7e-50  Score=348.95  Aligned_cols=302  Identities=26%  Similarity=0.424  Sum_probs=263.9

Q ss_pred             EEEeEeecCCCC---CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccc
Q 019822            5 VTLISFALKDSQ---RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL   81 (335)
Q Consensus         5 ~d~~~~~g~~~~---~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~   81 (335)
                      .|+|.|......   ...|.++| ||. +|+|.++|++|+++|+||||++.|..+|+.|+.|+.|.+|+|.+..+.+.+ 
T Consensus        44 SDvHy~~~G~ig~~v~k~PmvlG-HEs-sGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atp-  120 (354)
T KOG0024|consen   44 SDVHYYTHGRIGDFVVKKPMVLG-HES-SGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATP-  120 (354)
T ss_pred             ccchhhccCCcCccccccccccc-ccc-ccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCC-
Confidence            477877665543   25899999 999 999999999999999999999999999999999999999999998774222 


Q ss_pred             ccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCH
Q 019822           82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT  161 (335)
Q Consensus        82 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~  161 (335)
                      -.+                  |++++|++++++.+++||+++|++++|++. +++++|||. +++++++|++|||+|+|+
T Consensus       121 p~~------------------G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGP  180 (354)
T KOG0024|consen  121 PVD------------------GTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGP  180 (354)
T ss_pred             CcC------------------CceEEEEEechHheeeCCCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcH
Confidence            123                  389999999999999999999999999988 799999987 789999999999999999


Q ss_pred             HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCC-chhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP-NKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~-~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      +|+++...||++|+.+|++++-+++|++.++++|++.+.+..... +..+.+.++...+...+|+.|||+|....++.++
T Consensus       181 IGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai  260 (354)
T KOG0024|consen  181 IGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAI  260 (354)
T ss_pred             HHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHH
Confidence            999999999999999999999999999999999999876654311 2334555556666567999999999988999999


Q ss_pred             HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822          241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI  320 (335)
Q Consensus       241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~  320 (335)
                      .+++.+ |++++++... ...+++..++..+++.+.|+.-   ....+++.+++++++|++++++++|+.|+++++.|||
T Consensus       261 ~a~r~g-Gt~vlvg~g~-~~~~fpi~~v~~kE~~~~g~fr---y~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf  335 (354)
T KOG0024|consen  261 KATRSG-GTVVLVGMGA-EEIQFPIIDVALKEVDLRGSFR---YCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAF  335 (354)
T ss_pred             HHhccC-CEEEEeccCC-CccccChhhhhhheeeeeeeee---eccccHHHHHHHHHcCCcCchhheecccccchHHHHH
Confidence            999998 9999998866 5788999999899999999862   2345899999999999999999999999999999999


Q ss_pred             HHhcCCC--eeeEEEe
Q 019822          321 QLLKQPD--CVKVLIT  334 (335)
Q Consensus       321 ~~~~~~~--~~k~vi~  334 (335)
                      +.+..++  .+|+++.
T Consensus       336 ~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  336 ETLQHGEEGVIKVIIT  351 (354)
T ss_pred             HHHHhCcCCceEEEEe
Confidence            9988776  4599886

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.9e-48  Score=334.33  Aligned_cols=300  Identities=26%  Similarity=0.398  Sum_probs=264.9

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEE-ecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVI-PTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      .|+|.|.|..+...+|+|+| ||. +|+|+++|++|++|++||+|- -....+|..|++|..+.++.|.+.-..-+|+..
T Consensus        51 sDlH~~~gdwg~s~~PlV~G-HEi-aG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~  128 (360)
T KOG0023|consen   51 SDLHAWKGDWGLSKYPLVPG-HEI-AGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYH  128 (360)
T ss_pred             hhHHHhhccCCcccCCccCC-cee-eEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEecccccc
Confidence            58999999999988999999 999 999999999999999999995 555789999999999999999976555467777


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      +|             ...||+||+|+++++.+++++|++++.+.||.+.|+..|+|.+| ++.++.||+++-|.|+|++|
T Consensus       129 DG-------------t~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLG  194 (360)
T KOG0023|consen  129 DG-------------TITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLG  194 (360)
T ss_pred             CC-------------CCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccc
Confidence            76             34567899999999999999999999999999999999999988 67889999999999997799


Q ss_pred             HHHHHHHHHcCCCEEEEEcCCh-hhHHHHHhcCCceEeCCC-CCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822          164 LGAVDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDFINPD-DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE  241 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~-~~~~~~~~lga~~v~~~~-~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~  241 (335)
                      .+++|+||++|. +|++++++. .|.+.++.|||+.-++.. +   +++.+.+.+.+++ ++|-|.+.  ....++.+++
T Consensus       195 h~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~d---~d~~~~~~~~~dg-~~~~v~~~--a~~~~~~~~~  267 (360)
T KOG0023|consen  195 HMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTED---PDIMKAIMKTTDG-GIDTVSNL--AEHALEPLLG  267 (360)
T ss_pred             hHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecCC---HHHHHHHHHhhcC-cceeeeec--cccchHHHHH
Confidence            999999999999 999999988 455556889999877766 5   8888888888776 66666655  4446899999


Q ss_pred             hhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       242 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      +++.+ |++|++|.+.. ...++.+++..+.+.+.|+.+|+   +.+.++++++..++.++..   .+..+++++++||+
T Consensus       268 ~lk~~-Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~---~ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~e  339 (360)
T KOG0023|consen  268 LLKVN-GTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGS---RKETQEALDFVARGLIKSP---IELVKLSEVNEAYE  339 (360)
T ss_pred             HhhcC-CEEEEEeCcCC-cccccchhhhcccEEEEeecccc---HHHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHH
Confidence            99998 99999999985 88899999999999999999987   6889999999999998775   47899999999999


Q ss_pred             HhcCCCee-eEEEeC
Q 019822          322 LLKQPDCV-KVLITI  335 (335)
Q Consensus       322 ~~~~~~~~-k~vi~~  335 (335)
                      .|.+++.. |.|+++
T Consensus       340 rm~kgdV~yRfVvD~  354 (360)
T KOG0023|consen  340 RMEKGDVRYRFVVDV  354 (360)
T ss_pred             HHHhcCeeEEEEEEc
Confidence            99999875 888864

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.6e-46  Score=349.93  Aligned_cols=321  Identities=31%  Similarity=0.511  Sum_probs=270.2

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-ccccc
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML   83 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~   83 (335)
                      .|++.+.|.++. .+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|++|+.|.++.|.+..... .|...
T Consensus        48 ~D~~~~~g~~~~-~~p~i~G-hE~-~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~  124 (371)
T cd08281          48 SDLSVINGDRPR-PLPMALG-HEA-AGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLL  124 (371)
T ss_pred             cchHhhcCCCCC-CCCccCC-ccc-eeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccc
Confidence            467777777653 4689999 999 9999999999999999999999888899999999999999998764321 23223


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      +|..++..++..+.+..+.|+|+||+.++++.++++|+++++++|+++++++.|||+++.+.++++++++|||+|+|++|
T Consensus       125 ~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG  204 (371)
T cd08281         125 SGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVG  204 (371)
T ss_pred             cCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHH
Confidence            33223332222222222346899999999999999999999999999998999999998888899999999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+.+|+++|+++++++++++.++++|+++++++++   .++.+.+++++++ ++|++|||+|....+..+++++
T Consensus       205 ~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~---~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l  280 (371)
T cd08281         205 LSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGD---PNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEIT  280 (371)
T ss_pred             HHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCc---hhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHH
Confidence            99999999999967999999999999999999999999887   7788888888877 8999999999877889999999


Q ss_pred             ccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          244 KVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      +++ |+++.+|.... ...+++...++.+++++.|+..+++...++++.+++++.++++++.++++++|+|+|+++||+.
T Consensus       281 ~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~  359 (371)
T cd08281         281 RRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDR  359 (371)
T ss_pred             hcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHH
Confidence            997 99999997653 3456777778889999999876654445678899999999999988889999999999999999


Q ss_pred             hcCCCeeeEEE
Q 019822          323 LKQPDCVKVLI  333 (335)
Q Consensus       323 ~~~~~~~k~vi  333 (335)
                      +.+++..|.||
T Consensus       360 ~~~~~~~~~vi  370 (371)
T cd08281         360 LAAGEAVRQVI  370 (371)
T ss_pred             HhCCCceeeee
Confidence            99988775544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=4.5e-46  Score=346.40  Aligned_cols=325  Identities=40%  Similarity=0.705  Sum_probs=263.6

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~   84 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|++|+.|.++.|.+..... +|+..+
T Consensus        42 D~~~~~g~~~~~~~p~i~G-hE~-~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~  119 (368)
T TIGR02818        42 DAFTLSGADPEGVFPVILG-HEG-AGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPD  119 (368)
T ss_pred             HHHHhcCCCCCCCCCeeec-ccc-EEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccC
Confidence            5566677766556799999 999 9999999999999999999999999999999999999999998743210 233222


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      |..++..+|...++..+.|+|+||+.+|++.++++|+++++++++++++++.|||+++.++++++++++|||+|+|++|+
T Consensus       120 ~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~  199 (368)
T TIGR02818       120 GTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGL  199 (368)
T ss_pred             CccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHH
Confidence            22122222322233334569999999999999999999999999999999999999988888999999999999999999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+|+.+|+.+|+++++++++++.++++|+++++++++ ...++.+.+++++++ ++|++|||+|++..+..++++++
T Consensus       200 ~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~  277 (368)
T TIGR02818       200 SVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND-YDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCH  277 (368)
T ss_pred             HHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-cchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhh
Confidence            9999999999867999999999999999999999998763 114466778888877 89999999998778899999997


Q ss_pred             cCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822          245 VGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       245 ~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      +++|+++.+|.... ...++....+. ++..+.++..+......++.++++++.+++++++++++++|+|+|+++||+.+
T Consensus       278 ~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~  356 (368)
T TIGR02818       278 KGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLM  356 (368)
T ss_pred             cCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHH
Confidence            72289999997643 33444455554 34557777654433345789999999999998888899999999999999999


Q ss_pred             cCCCeeeEEEeC
Q 019822          324 KQPDCVKVLITI  335 (335)
Q Consensus       324 ~~~~~~k~vi~~  335 (335)
                      .+++..|+++.+
T Consensus       357 ~~~~~~k~~v~~  368 (368)
T TIGR02818       357 HEGKSIRTVIHY  368 (368)
T ss_pred             hCCCceeEEeeC
Confidence            887777999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.7e-45  Score=342.77  Aligned_cols=325  Identities=41%  Similarity=0.716  Sum_probs=268.0

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-ccccc
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML   83 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~   83 (335)
                      .|++.+.|.++...+|.++| ||+ +|+|+++|+++++|++||+|++.+..+|+.|++|++|.++.|.+..... .|...
T Consensus        42 ~D~~~~~g~~~~~~~p~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~  119 (368)
T cd08300          42 TDAYTLSGADPEGLFPVILG-HEG-AGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMP  119 (368)
T ss_pred             hhHHHhcCCCccCCCCceec-cce-eEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccC
Confidence            46666677776556899999 999 9999999999999999999999999999999999999999998753210 23333


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      +|..++..+|...++..+.|+|+||+.++++.++++|+++++++++++++++.|||+++++...++++++|||+|+|++|
T Consensus       120 ~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG  199 (368)
T cd08300         120 DGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVG  199 (368)
T ss_pred             CCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHH
Confidence            33333333444444444557999999999999999999999999999999999999998888899999999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+.+|+.+|+++++++++++.++++|+++++++++ .+.++.+.+++++++ ++|+|||++|++..+..+++++
T Consensus       200 ~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l  277 (368)
T cd08300         200 LAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD-HDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEAC  277 (368)
T ss_pred             HHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc-cchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhh
Confidence            99999999999967999999999999999999999998875 112577888888887 9999999999876889999999


Q ss_pred             ccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          244 KVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      ++++|+++.+|.... ....++...+. ++..+.++..+.+....++.++++++.++++++.++++++|+|+|+++||+.
T Consensus       278 ~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~  356 (368)
T cd08300         278 HKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDL  356 (368)
T ss_pred             ccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHH
Confidence            773389999997642 23444444444 4456777766655556788999999999999988889999999999999999


Q ss_pred             hcCCCeeeEEEe
Q 019822          323 LKQPDCVKVLIT  334 (335)
Q Consensus       323 ~~~~~~~k~vi~  334 (335)
                      +.+++..|++++
T Consensus       357 ~~~~~~~k~~~~  368 (368)
T cd08300         357 MHAGKSIRTVVK  368 (368)
T ss_pred             HhCCCCceeeeC
Confidence            988877798874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=8.1e-45  Score=336.97  Aligned_cols=316  Identities=27%  Similarity=0.496  Sum_probs=262.8

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++. .+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|.+|++|.++.|.+..........  
T Consensus        42 D~~~~~g~~~~-~~p~i~G-~e~-~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~--  116 (358)
T TIGR03451        42 DLHYREGGIND-EFPFLLG-HEA-AGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL--  116 (358)
T ss_pred             HHHHhcCCccc-cCCcccc-cce-EEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCcccccccccc--
Confidence            44555565442 4789999 999 999999999999999999999999999999999999999999853211000000  


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                           .+|.......+.|+|+||+.+++..++++|+++++++++++++.+.++|+++.+...+.++++|||+|+|++|++
T Consensus       117 -----~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~  191 (358)
T TIGR03451       117 -----TDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDA  191 (358)
T ss_pred             -----ccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHH
Confidence                 001000000123589999999999999999999999999999999999988878888999999999999999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++|+|+.+|+++|++++++++++++++++|+++++++++   .++.+.+++.+++.++|++|||+|++..++.+++++++
T Consensus       192 a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~  268 (358)
T TIGR03451       192 AIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDL  268 (358)
T ss_pred             HHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcc
Confidence            999999999956999999999999999999999999876   67888888888887999999999987688999999999


Q ss_pred             CCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822          246 GKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK  324 (335)
Q Consensus       246 ~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~  324 (335)
                      + |+++.+|.... ...++++..++.+++++.++..+.....++++.++++++++++++.++++++||++|+++||+.+.
T Consensus       269 ~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~  347 (358)
T TIGR03451       269 A-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMH  347 (358)
T ss_pred             C-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHh
Confidence            8 99999998654 235677777777899999876543333567889999999999998888999999999999999998


Q ss_pred             CCCeeeEEEeC
Q 019822          325 QPDCVKVLITI  335 (335)
Q Consensus       325 ~~~~~k~vi~~  335 (335)
                      +++..|+++.+
T Consensus       348 ~~~~~k~~~~~  358 (358)
T TIGR03451       348 AGDVLRSVVEL  358 (358)
T ss_pred             CCCcceeEEeC
Confidence            88878888763

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=7e-45  Score=339.91  Aligned_cols=324  Identities=42%  Similarity=0.777  Sum_probs=262.8

Q ss_pred             EEEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-
Q 019822            5 VTLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-   82 (335)
Q Consensus         5 ~d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-   82 (335)
                      .|++.+.|.++. ..+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|++|.+|.++.|.+....  ++. 
T Consensus        50 sD~~~~~g~~~~~~~~p~i~G-hE~-~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~--~~~~  125 (381)
T PLN02740         50 TDLSAWKGENEAQRAYPRILG-HEA-AGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVD--PFKS  125 (381)
T ss_pred             hhHHHhCCCCcccCCCCcccc-ccc-eEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCcccc--cccc
Confidence            366667776643 35789999 999 999999999999999999999999999999999999999999986542  110 


Q ss_pred             ---cCCCcccccc--CceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           83 ---LDSTSRMSVR--GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        83 ---~~g~~~~~~~--~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                         .+|..+....  +...++....|+|+||+.+|++.++++|+++++++++++++++.|||+++++.++++++++|||+
T Consensus       126 ~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~  205 (381)
T PLN02740        126 VMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIF  205 (381)
T ss_pred             ccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEE
Confidence               0110000000  00011111236999999999999999999999999999999999999988888999999999999


Q ss_pred             cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHH
Q 019822          158 GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS  237 (335)
Q Consensus       158 G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~  237 (335)
                      |+|++|++++|+|+.+|+++|+++++++++++.++++|+++++++++ ...++.+.+++++++ ++|++||++|.+..+.
T Consensus       206 G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~  283 (381)
T PLN02740        206 GLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKD-SDKPVHERIREMTGG-GVDYSFECAGNVEVLR  283 (381)
T ss_pred             CCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEeccc-ccchHHHHHHHHhCC-CCCEEEECCCChHHHH
Confidence            99999999999999999866999999999999999999999998765 112477788888877 8999999999877889


Q ss_pred             HHHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhH
Q 019822          238 EALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI  316 (335)
Q Consensus       238 ~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~  316 (335)
                      .+++++++++|+++.+|.... ...+++...+. +++++.|+..+++....++..+++++.++.+++.++++++|+|+|+
T Consensus       284 ~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~  362 (381)
T PLN02740        284 EAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF-DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKI  362 (381)
T ss_pred             HHHHhhhcCCCEEEEEccCCCCceecccHHHHh-cCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHH
Confidence            999999872289999997653 22344444344 7889999887665444578899999999999888889999999999


Q ss_pred             HHHHHHhcCCCeeeEEEeC
Q 019822          317 DKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       317 ~ea~~~~~~~~~~k~vi~~  335 (335)
                      ++|++.+.+++..|++|.+
T Consensus       363 ~~A~~~~~~~~~~k~~~~~  381 (381)
T PLN02740        363 NEAFQLLEDGKALRCLLHL  381 (381)
T ss_pred             HHHHHHHHCCCceeEEEeC
Confidence            9999999888888999874

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.5e-44  Score=332.92  Aligned_cols=298  Identities=27%  Similarity=0.417  Sum_probs=255.6

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|+.|++||+|++.+...|+.|++|+.|+++.|.+.... +|...+
T Consensus        40 D~~~~~~~~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~g~~~~  116 (339)
T cd08239          40 DLHYYYHGHRAPAYQGVIPG-HEP-AGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAA-YGWNRD  116 (339)
T ss_pred             cHHHHcCCCCccCCCCceec-cCc-eEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccc-cccCCC
Confidence            45555555432 23588999 999 999999999999999999999999999999999999999999876542 354444


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      |                  +|+||+.+|++.++++|+++++++++++++++.|||+++ +.+++.++++|||+|+|++|+
T Consensus       117 G------------------~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~  177 (339)
T cd08239         117 G------------------GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGL  177 (339)
T ss_pred             C------------------cceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHH
Confidence            4                  999999999999999999999999999999999999987 567889999999999999999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+|+.+|+++|+++++++++++.++++|+++++++++   .+ .+.++++++++++|++|||+|+...+..++++++
T Consensus       178 ~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~  253 (339)
T cd08239         178 GALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVR  253 (339)
T ss_pred             HHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhh
Confidence            9999999999944999999999999999999999999876   55 6677777777799999999999867788999999


Q ss_pred             cCCeEEEEEccCCCccccch-hHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822          245 VGKGKVIVIGVGVDAMVPLN-VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      ++ |+++.+|.....  .+. ...++.+++++.++...+   .+++..+++++.++++++.++++++|+|+++++||+.+
T Consensus       254 ~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~  327 (339)
T cd08239         254 PW-GRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFS---VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALF  327 (339)
T ss_pred             cC-CEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCC---HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHH
Confidence            98 999999976532  233 235667899999987543   46789999999999999888999999999999999999


Q ss_pred             cCCCeeeEEEeC
Q 019822          324 KQPDCVKVLITI  335 (335)
Q Consensus       324 ~~~~~~k~vi~~  335 (335)
                      .+++..|+++++
T Consensus       328 ~~~~~gKvvi~~  339 (339)
T cd08239         328 AQGESGKVVFVF  339 (339)
T ss_pred             HcCCceEEEEeC
Confidence            887767999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=3.1e-44  Score=334.43  Aligned_cols=324  Identities=42%  Similarity=0.778  Sum_probs=268.0

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc-ccccc-
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLM-   82 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~-~~g~~-   82 (335)
                      .|++.++|.++...+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|.+|.+|.++.|.+.... ..|.. 
T Consensus        42 ~D~~~~~g~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~  119 (369)
T cd08301          42 TDVYFWEAKGQTPLFPRILG-HEA-AGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMI  119 (369)
T ss_pred             hhHHHhcCCCCCCCCCcccc-ccc-ceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCccccccccccc
Confidence            46666777776667899999 999 999999999999999999999999999999999999999999975331 11222 


Q ss_pred             cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                      .++..++...|...++..+.|+|+||+.+++..++++|+++++++++++++.+.|+|+++++..++.++++|||+|+|++
T Consensus       120 ~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~v  199 (369)
T cd08301         120 NDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAV  199 (369)
T ss_pred             CCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHH
Confidence            11222222333333333344689999999999999999999999999999999999999888889999999999999999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |++++|+|+.+|+++|+++++++++.+.++++|++.++++++ ....+.+.+++++++ ++|++||++|....+..++++
T Consensus       200 G~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~  277 (369)
T cd08301         200 GLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD-HDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFEC  277 (369)
T ss_pred             HHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc-cchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHH
Confidence            999999999999867999999999999999999999888764 113466778888777 899999999987678899999


Q ss_pred             hcc-CCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822          243 TKV-GKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI  320 (335)
Q Consensus       243 l~~-~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~  320 (335)
                      +++ + |+++.+|.... ...+++...++ +++++.|+..+++..+.+++.+++++.++++++.++++++|||+|+++||
T Consensus       278 ~~~~~-g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~  355 (369)
T cd08301         278 VHDGW-GVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAF  355 (369)
T ss_pred             hhcCC-CEEEEECcCCCCcccccCHHHHh-cCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHH
Confidence            998 4 89999998754 34455554554 78999998776655456788999999999998888889999999999999


Q ss_pred             HHhcCCCeeeEEEe
Q 019822          321 QLLKQPDCVKVLIT  334 (335)
Q Consensus       321 ~~~~~~~~~k~vi~  334 (335)
                      +.+.+++..|+++.
T Consensus       356 ~~~~~~~~~k~~~~  369 (369)
T cd08301         356 DLLLKGECLRCILH  369 (369)
T ss_pred             HHHHCCCceeEEeC
Confidence            99999888898873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=3.7e-44  Score=333.33  Aligned_cols=323  Identities=48%  Similarity=0.852  Sum_probs=264.4

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++ ..+|.++| ||+ +|+|+++|++++++++||+|+..+...|+.|.+|..|.++.|++..+...|...++
T Consensus        43 D~~~~~g~~~-~~~p~i~G-~e~-~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~  119 (365)
T cd08277          43 DILAIEGFKA-TLFPVILG-HEG-AGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDG  119 (365)
T ss_pred             hHHHhcCCCC-CCCCeecc-cce-eEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCC
Confidence            5555666655 45789999 999 99999999999999999999999999999999999999999998665333443332


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                      .......|...++..+.|+|+||+.++++.++++|+++++++++++++++.|||+++.+..++.++++|||+|+|++|++
T Consensus       120 ~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~  199 (365)
T cd08277         120 TSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLS  199 (365)
T ss_pred             ccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHH
Confidence            22222222222222234689999999999999999999999999999999999998888889999999999999999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++++|+.+|+.+|+++++++++++.++++|+++++++++ ...++.+.++++++ .++|++|||+|+...+..+++++++
T Consensus       200 ~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~-~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~  277 (365)
T cd08277         200 AIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD-SDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKL  277 (365)
T ss_pred             HHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc-ccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhccc
Confidence            999999999867999999999999999999999998764 11235677888777 4899999999987688999999976


Q ss_pred             CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822          246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ  325 (335)
Q Consensus       246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~  325 (335)
                      ++|+++.+|...+...+++...++ +++++.++..+++....++..+++++.++.+++.++++++|+|+|+++||+.+.+
T Consensus       278 ~~G~~v~~g~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~  356 (365)
T cd08277         278 GWGVSVVVGVPPGAELSIRPFQLI-LGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKS  356 (365)
T ss_pred             CCCEEEEEcCCCccccccCHhHHh-hCCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHC
Confidence            229999999865333456666666 4889998887665445678999999999999888889999999999999999988


Q ss_pred             CCeeeEEEe
Q 019822          326 PDCVKVLIT  334 (335)
Q Consensus       326 ~~~~k~vi~  334 (335)
                      ++..|+++.
T Consensus       357 ~~~~k~~i~  365 (365)
T cd08277         357 GECIRTVIT  365 (365)
T ss_pred             CCCceEeeC
Confidence            877798874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=9.8e-44  Score=327.04  Aligned_cols=306  Identities=25%  Similarity=0.357  Sum_probs=252.3

Q ss_pred             EEEeEeecCCCCCCccc-cccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            5 VTLISFALKDSQRLFIL-VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~-v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      .|+|.++|..+....|. ++| ||+ +|+|+++| .++.+++||||++.+..+|+.|++|+.|.++.|.+..+.  |...
T Consensus        40 SDlh~~~g~~~~~~~~~~i~G-HE~-~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~--g~~~  114 (350)
T COG1063          40 SDLHIYRGGEPFVPPGDIILG-HEF-VGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFY--GYAG  114 (350)
T ss_pred             hhhhhccCCCCCCCCCCcccC-ccc-eEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCcccc--cccc
Confidence            48899999887766666 999 999 99999999 777899999999999999999999999999999976542  3221


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEE-cCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVK-VDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~-lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                      .+     .      +  -.|+|+||+++|.+..++ +|+++ ..+++++..++++++++........++.+|+|+|+|++
T Consensus       115 ~~-----~------~--~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpI  180 (350)
T COG1063         115 LG-----G------G--IDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPI  180 (350)
T ss_pred             cc-----C------C--CCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHH
Confidence            00     0      0  013999999999755555 57887 55555566699999876445555566669999999999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE  241 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~  241 (335)
                      |++++++++.+|+++|++++.+++|++++++ .|++.+++..+   .+....+.+.++|+++|++|||+|....+..+++
T Consensus       181 GLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~  257 (350)
T COG1063         181 GLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALE  257 (350)
T ss_pred             HHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHH
Confidence            9999999999999999999999999999988 66777776665   4677788889999999999999999888999999


Q ss_pred             hhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       242 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      .++++ |+++.+|........++...+..+++++.|+...  ....+++.+++++.+|++++.+++++.++++++++|++
T Consensus       258 ~~r~g-G~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~  334 (350)
T COG1063         258 ALRPG-GTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRP--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYE  334 (350)
T ss_pred             HhcCC-CEEEEEeccCCccCccCHHHHHhcccEEEeccCC--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHH
Confidence            99998 9999999987521167777888899999998421  13468999999999999999999999999999999999


Q ss_pred             HhcCCC--eeeEEEeC
Q 019822          322 LLKQPD--CVKVLITI  335 (335)
Q Consensus       322 ~~~~~~--~~k~vi~~  335 (335)
                      .+.+.+  ..|+++.+
T Consensus       335 ~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         335 LFADRKEEAIKVVLKP  350 (350)
T ss_pred             HHHhcCCCeEEEEecC
Confidence            998754  45999864

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-43  Score=326.64  Aligned_cols=298  Identities=21%  Similarity=0.303  Sum_probs=245.2

Q ss_pred             EEEeEee-cCCCC--CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccc
Q 019822            5 VTLISFA-LKDSQ--RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL   81 (335)
Q Consensus         5 ~d~~~~~-g~~~~--~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~   81 (335)
                      .|++.+. |.++.  ..+|.++| ||+ +|+|+++  ++++|++||+|++.+..+|+.|++|++|.++.|.+..+  +|.
T Consensus        42 sD~~~~~~g~~~~~~~~~p~v~G-hE~-~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~  115 (343)
T PRK09880         42 SDLHYYQEGKVGNFVIKAPMVLG-HEV-IGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF--FGS  115 (343)
T ss_pred             cccHhhccCCcccccccCCcccC-ccc-EEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce--eec
Confidence            4666664 44322  35799999 999 9999999  68899999999999999999999999999999997654  232


Q ss_pred             ccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCH
Q 019822           82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT  161 (335)
Q Consensus        82 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~  161 (335)
                      ....             ....|+|+||+.++++.++++|+++++++++. ..++++||+++ .+....++++|||+|+|+
T Consensus       116 ~~~~-------------~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~al-~~~~~~~g~~VlV~G~G~  180 (343)
T PRK09880        116 AMYF-------------PHVDGGFTRYKVVDTAQCIPYPEKADEKVMAF-AEPLAVAIHAA-HQAGDLQGKRVFVSGVGP  180 (343)
T ss_pred             cccc-------------CCCCCceeeeEEechHHeEECCCCCCHHHHHh-hcHHHHHHHHH-HhcCCCCCCEEEEECCCH
Confidence            1000             00024999999999999999999999876654 45788999987 445667899999999999


Q ss_pred             HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822          162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE  241 (335)
Q Consensus       162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~  241 (335)
                      +|++++|+|+.+|+++|+++++++++++.++++|+++++++++   .++.+.. +. .+ ++|++|||+|++..+..+++
T Consensus       181 vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~~~-~~-~g-~~D~vid~~G~~~~~~~~~~  254 (343)
T PRK09880        181 IGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN---DDLDHYK-AE-KG-YFDVSFEVSGHPSSINTCLE  254 (343)
T ss_pred             HHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc---ccHHHHh-cc-CC-CCCEEEECCCCHHHHHHHHH
Confidence            9999999999999977999999999999999999999999876   4543322 22 23 69999999998768899999


Q ss_pred             hhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       242 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      +++++ |+++.+|... ...++++..++.+++++.++...    .++++.++++++++++++.++++++|+|+|+++||+
T Consensus       255 ~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~  328 (343)
T PRK09880        255 VTRAK-GVMVQVGMGG-APPEFPMMTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALI  328 (343)
T ss_pred             HhhcC-CEEEEEccCC-CCCccCHHHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHH
Confidence            99998 9999999754 34567777777899999987632    467999999999999998888999999999999999


Q ss_pred             HhcCCCe-eeEEEeC
Q 019822          322 LLKQPDC-VKVLITI  335 (335)
Q Consensus       322 ~~~~~~~-~k~vi~~  335 (335)
                      .+.+++. .|+++.+
T Consensus       329 ~~~~~~~~gKvvl~~  343 (343)
T PRK09880        329 FAGDKTQAAKVQLVF  343 (343)
T ss_pred             HHhcCCCceEEEEeC
Confidence            9988765 5999874

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.9e-43  Score=328.34  Aligned_cols=313  Identities=42%  Similarity=0.787  Sum_probs=252.8

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc-CCCccccccCcee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML-DSTSRMSVRGQKL   96 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~-~g~~~~~~~~~~~   96 (335)
                      .+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|.+|++|.++.|.+......|... +...++...|.-.
T Consensus        62 ~~p~i~G-hE~-~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~  139 (378)
T PLN02827         62 LFPRIFG-HEA-SGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPV  139 (378)
T ss_pred             CCCeeec-ccc-eEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCccc
Confidence            3588999 999 999999999999999999999999999999999999999999874221111110 0000000001000


Q ss_pred             ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA  176 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~  176 (335)
                      .+....|+|+||+.+++..++++|+++++++++.+++.+.++|+++++.+++.++++|||+|+|++|++++|+|+++|++
T Consensus       140 ~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~  219 (378)
T PLN02827        140 YHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGAS  219 (378)
T ss_pred             ccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence            00112359999999999999999999999999999888899998887778899999999999999999999999999996


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .|+++++++++.+.++++|+++++++++ ...++.+.+++++++ ++|++||++|....+..+++.+++++|+++.+|..
T Consensus       220 ~vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~  297 (378)
T PLN02827        220 QIIGVDINPEKAEKAKTFGVTDFINPND-LSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVP  297 (378)
T ss_pred             eEEEECCCHHHHHHHHHcCCcEEEcccc-cchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCc
Confidence            6889998999999999999999998764 113577778888877 89999999998767899999998832899999986


Q ss_pred             CCccccchh-HHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          257 VDAMVPLNV-IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       257 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      .. ..++.. ..++.+++++.|+..+.+....++..+++++.++++++.++++++|+|+++++|++.+.+++..|+||.+
T Consensus       298 ~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~  376 (378)
T PLN02827        298 KA-KPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHM  376 (378)
T ss_pred             CC-CccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEe
Confidence            53 233333 3466699999998766554456788999999999999887899999999999999999988878998864

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=7.6e-42  Score=316.94  Aligned_cols=294  Identities=26%  Similarity=0.423  Sum_probs=241.3

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCcccccc----
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALN----   79 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~----   79 (335)
                      .|++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|++.+. ..|+.|++|++|.++.|.+..+...    
T Consensus        52 sD~~~~~g~~~~~~~p~i~G-hE~-~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~  129 (360)
T PLN02586         52 SDLHTIKNEWGFTRYPIVPG-HEI-VGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGH  129 (360)
T ss_pred             hhHhhhcCCcCCCCCCccCC-cce-eEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCcccccccccc
Confidence            46666777665446789999 999 9999999999999999999986554 5799999999999999987543210    


Q ss_pred             -ccccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc
Q 019822           80 -GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG  158 (335)
Q Consensus        80 -g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G  158 (335)
                       |...+                  |+|+||+.+|++.++++|+++++++++++++.+.|+|+++.....+.++++|||.|
T Consensus       130 ~g~~~~------------------G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G  191 (360)
T PLN02586        130 DGTKNY------------------GGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAG  191 (360)
T ss_pred             CCCcCC------------------CccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEEC
Confidence             11122                  48999999999999999999999999999999999999886666678999999999


Q ss_pred             CCHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHH
Q 019822          159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS  237 (335)
Q Consensus       159 ~g~vG~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~  237 (335)
                      +|++|++++|+|+.+|+ +|++++.+++++ +.++++|+++++++++   .   +.+++.++  ++|++||++|....+.
T Consensus       192 ~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~---~---~~~~~~~~--~~D~vid~~g~~~~~~  262 (360)
T PLN02586        192 LGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTD---P---EKMKAAIG--TMDYIIDTVSAVHALG  262 (360)
T ss_pred             CCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCC---H---HHHHhhcC--CCCEEEECCCCHHHHH
Confidence            99999999999999999 888887666654 4568899999998765   3   24555543  6999999999876789


Q ss_pred             HHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          238 EALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       238 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      .++++++++ |+++.+|.... ...+++..++.++..+.++..++   ..+++++++++.+|++++.  + ++|+|+|++
T Consensus       263 ~~~~~l~~~-G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~  334 (360)
T PLN02586        263 PLLGLLKVN-GKLITLGLPEK-PLELPIFPLVLGRKLVGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEIN  334 (360)
T ss_pred             HHHHHhcCC-cEEEEeCCCCC-CCccCHHHHHhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHH
Confidence            999999998 99999997643 45667777777888888776443   3578999999999998753  4 589999999


Q ss_pred             HHHHHhcCCCe-eeEEEeC
Q 019822          318 KAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       318 ea~~~~~~~~~-~k~vi~~  335 (335)
                      +||+.+.+++. .|+++.+
T Consensus       335 ~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        335 TAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             HHHHHHHcCCCcEEEEEEc
Confidence            99999988876 4988864

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=7.8e-42  Score=319.55  Aligned_cols=305  Identities=23%  Similarity=0.315  Sum_probs=239.5

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc----cccc
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA----LNGL   81 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~----~~g~   81 (335)
                      |++.+.|.++. .+|.++| ||+ +|+|+++|++|++|++||||++.+...|+.|++|++|+++.|.+....    .+|+
T Consensus        49 D~~~~~g~~~~-~~p~i~G-hE~-~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~  125 (393)
T TIGR02819        49 DQHMVRGRTTA-PTGLVLG-HEI-TGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGY  125 (393)
T ss_pred             HHHHHCCCCCC-CCCcccc-cee-EEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecc
Confidence            56666676543 4689999 999 999999999999999999999999999999999999999999974321    0121


Q ss_pred             ccCCCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCc----ccccccccchhhhhHHHHHhcCCCCCCEEE
Q 019822           82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDP----SDASFLSCGFTTGYGAAWKEAKVEKGSSVA  155 (335)
Q Consensus        82 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~----~~aa~l~~~~~ta~~~l~~~~~~~~~~~Vl  155 (335)
                      ...+            .  -.|+|+||+.+|+.  .++++|++++.    ..++++.+++.++|+++ .+.++.++++||
T Consensus       126 ~~~~------------~--~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~Vl  190 (393)
T TIGR02819       126 VDMG------------G--WVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVY  190 (393)
T ss_pred             cccC------------C--CCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEE
Confidence            1000            0  02489999999964  79999998754    34667777899999987 568899999999


Q ss_pred             EEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh--
Q 019822          156 VLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP--  233 (335)
Q Consensus       156 I~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~--  233 (335)
                      |.|+|++|++++|+|+.+|++.|+++++++++++.++++|++.+...++   .++.+.++++++++++|++||++|.+  
T Consensus       191 V~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~  267 (393)
T TIGR02819       191 IAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEAR  267 (393)
T ss_pred             EECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccc
Confidence            9889999999999999999955677778889999999999975443343   45777788888877999999999985  


Q ss_pred             ------------HHHHHHHHhhccCCeEEEEEccCCC-cc-----------ccchhHHHhhcCcEEEEeeccCCCCcCcH
Q 019822          234 ------------SLLSEALETTKVGKGKVIVIGVGVD-AM-----------VPLNVIALACGGRTLKGTTFGGIKTKSDL  289 (335)
Q Consensus       234 ------------~~~~~~~~~l~~~~G~~v~~g~~~~-~~-----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  289 (335)
                                  ..++.+++.++++ |+++.+|.... ..           .++....++.+++++.+..   ....+.+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~  343 (393)
T TIGR02819       268 GHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYN  343 (393)
T ss_pred             cccccccccchHHHHHHHHHHhhCC-CEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhH
Confidence                        3789999999998 99999998632 11           2233334445666666532   1112334


Q ss_pred             HHHHHHHhCCCCCCCCcee-EEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          290 PTLLDKCKNKEFKLHQLLT-HHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       290 ~~~~~~i~~~~~~~~~~~~-~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      .++++++.++++++.++++ ++|||+|+++||+.+.+++..|++|.+
T Consensus       344 ~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~  390 (393)
T TIGR02819       344 RNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAAKKFVIDP  390 (393)
T ss_pred             HHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCceEEEEeC
Confidence            6799999999999887777 789999999999999888778999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=2.9e-42  Score=309.32  Aligned_cols=270  Identities=22%  Similarity=0.317  Sum_probs=226.9

Q ss_pred             cccccccceEEEEEeCCCCC------cccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCce
Q 019822           22 VFSGTKVSGKVVESAGDEVK------EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQK   95 (335)
Q Consensus        22 v~G~~e~~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~   95 (335)
                      ++| ||+ +|+|+++|++|+      +|++||||++.+...|+.|++|+.|.++.|.+..+  +|....+       +  
T Consensus         1 v~G-HE~-~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~~~-------~--   67 (280)
T TIGR03366         1 VLG-HEI-VGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK--YGHEALD-------S--   67 (280)
T ss_pred             CCC-ccc-ceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh--cCccccc-------C--
Confidence            578 999 999999999999      89999999999999999999999999999987655  2432100       0  


Q ss_pred             eecccccccceeeEEeccc-ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC
Q 019822           96 LYHIFSCSTWSEYMVIDAN-YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG  174 (335)
Q Consensus        96 ~~~~~~~g~~~~~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G  174 (335)
                        .....|+|+||+.+|++ .++++|+++++++++.+++.+.|+|+++ ++....++++|||+|+|++|++++|+|+++|
T Consensus        68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G  144 (280)
T TIGR03366        68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG  144 (280)
T ss_pred             --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence              00012489999999997 7999999999999999998999999987 4556679999999999999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822          175 AAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       175 ~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      +++|++++++++|++.++++|++.++++++     ..+.++++++++++|++||++|.+..++.++++++++ |+++.+|
T Consensus       145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G  218 (280)
T TIGR03366       145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG  218 (280)
T ss_pred             CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence            955999999999999999999999888754     3456667777779999999999887889999999998 9999999


Q ss_pred             cCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCC--CCCCCCceeEEeechhH
Q 019822          255 VGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK--EFKLHQLLTHHVKLEEI  316 (335)
Q Consensus       255 ~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~l~~~  316 (335)
                      .... ...+++...++.+++++.|+..+   ..++++++++++.++  ++++.++++++|||+|+
T Consensus       219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       219 SVFPGGPVALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             cCCCCCceeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            7543 34567778888899999987643   246799999999974  67777889999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.6e-41  Score=313.80  Aligned_cols=299  Identities=24%  Similarity=0.353  Sum_probs=251.4

Q ss_pred             EEeEeecC-CCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALK-DSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~-~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.+. .+...+|.++| ||+ +|+|+++|+++..+ +||+|++.+..+|+.|.+|++|.++.|.+...  .|...+
T Consensus        39 D~~~~~~~~~~~~~~p~i~G-hE~-~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~~~~  113 (349)
T TIGR03201        39 DLSYYYMGVRTNHALPLALG-HEI-SGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKM--PGNDMQ  113 (349)
T ss_pred             chHHHcCCCCccCCCCeecc-ccc-eEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCc--cCcCCC
Confidence            45444332 33345789999 999 99999999999887 99999999999999999999999999986543  243333


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCC------CCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP------SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG  158 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~------~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G  158 (335)
                      |                  +|+||+.++++.++++|+      ++++++++++++++.|+|+++. ...+.++++|+|+|
T Consensus       114 G------------------~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G  174 (349)
T TIGR03201       114 G------------------GFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIG  174 (349)
T ss_pred             C------------------cccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEEC
Confidence            4                  899999999999999999      8999999999889999999874 57889999999999


Q ss_pred             CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCcc----EEEEcCCChH
Q 019822          159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD----YCFECTGVPS  234 (335)
Q Consensus       159 ~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d----~vid~~g~~~  234 (335)
                      +|++|++++|+|+.+|+ +|++++++++++++++++|+++++++.+....++.+.++++++++++|    ++|||+|+..
T Consensus       175 ~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~  253 (349)
T TIGR03201       175 AGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKP  253 (349)
T ss_pred             CCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChH
Confidence            99999999999999999 899999999999999999999999876511135777788888888887    8999999987


Q ss_pred             HHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeech
Q 019822          235 LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE  314 (335)
Q Consensus       235 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~  314 (335)
                      .++.++++++++ |+++.+|.... ..+++...++.++.++.++...+   ..++..++++++++++++.++++ +|||+
T Consensus       254 ~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~i~~g~i~~~~~i~-~~~l~  327 (349)
T TIGR03201       254 GQESALSLLSHG-GTLVVVGYTMA-KTEYRLSNLMAFHARALGNWGCP---PDRYPAALDLVLDGKIQLGPFVE-RRPLD  327 (349)
T ss_pred             HHHHHHHHHhcC-CeEEEECcCCC-CcccCHHHHhhcccEEEEEecCC---HHHHHHHHHHHHcCCCCcccceE-EecHH
Confidence            788899999998 99999998753 34566667776788888875332   46789999999999998877775 79999


Q ss_pred             hHHHHHHHhcCCCee-eEEEeC
Q 019822          315 EIDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       315 ~~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      ++++||+.+.+++.. |+++++
T Consensus       328 ~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       328 QIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             HHHHHHHHHHcCCccceEEecC
Confidence            999999999888765 888763

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.3e-41  Score=316.44  Aligned_cols=294  Identities=22%  Similarity=0.388  Sum_probs=241.5

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccC-CCCCCcccccCCCCCCcCcccccc----
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIG-ECKECENCTSEMTNLCLKYPIALN----   79 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~g~~~~c~~~~~~~~----   79 (335)
                      .|++.+.|.++...+|.++| ||+ +|+|+++|+++++|++||+|++.+.. .|+.|++|++|.++.|.+..+...    
T Consensus        46 sD~~~~~G~~~~~~~p~i~G-hE~-aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~  123 (375)
T PLN02178         46 SDLHTIKNHWGFSRYPIIPG-HEI-VGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSS  123 (375)
T ss_pred             HHHHHhcCCCCCCCCCcccC-cee-eEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCcccccccccc
Confidence            36666777665445789999 999 99999999999999999999876654 699999999999999997643100    


Q ss_pred             -ccccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcC-CCCCCEEEEE
Q 019822           80 -GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK-VEKGSSVAVL  157 (335)
Q Consensus        80 -g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~-~~~~~~VlI~  157 (335)
                       |...+                  |+|+||+.+|++.++++|+++++++++++++...|+|+++..... .+++++|+|.
T Consensus       124 ~g~~~~------------------G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~  185 (375)
T PLN02178        124 DGTRNQ------------------GGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVN  185 (375)
T ss_pred             CCCcCC------------------CccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEE
Confidence             11112                  489999999999999999999999999999999999998754432 3689999999


Q ss_pred             cCCHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHH
Q 019822          158 GLGTVGLGAVDGARMHGAAKIIGIDKNPWK-KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLL  236 (335)
Q Consensus       158 G~g~vG~~ai~la~~~G~~~V~~~~~~~~~-~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~  236 (335)
                      |+|++|++++|+|+.+|+ +|+++++++++ .+.++++|+++++++++   .   +.+++.++  ++|++|||+|.+..+
T Consensus       186 G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~---~---~~v~~~~~--~~D~vid~~G~~~~~  256 (375)
T PLN02178        186 GLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD---S---QKMKEAVG--TMDFIIDTVSAEHAL  256 (375)
T ss_pred             cccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC---H---HHHHHhhC--CCcEEEECCCcHHHH
Confidence            999999999999999999 88888876554 67788999999998764   2   34555553  699999999987678


Q ss_pred             HHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhH
Q 019822          237 SEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI  316 (335)
Q Consensus       237 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~  316 (335)
                      ..++++++++ |+++.+|... ...+++...++.+++++.|+..++   ..++.++++++.+|++++.  + ++|||+|+
T Consensus       257 ~~~~~~l~~~-G~iv~vG~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~  328 (375)
T PLN02178        257 LPLFSLLKVS-GKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQIGG---MKETQEMLEFCAKHKIVSD--I-ELIKMSDI  328 (375)
T ss_pred             HHHHHhhcCC-CEEEEEccCC-CCCccCHHHHHhCCeEEEEeCccC---HHHHHHHHHHHHhCCCccc--E-EEEeHHHH
Confidence            9999999997 9999999764 345667777778999999886543   3578899999999998754  4 57999999


Q ss_pred             HHHHHHhcCCCe-eeEEEeC
Q 019822          317 DKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       317 ~ea~~~~~~~~~-~k~vi~~  335 (335)
                      ++||+.+.+++. .|+++.+
T Consensus       329 ~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        329 NSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             HHHHHHHHcCCCceEEEEEe
Confidence            999999988876 4988864

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-41  Score=310.61  Aligned_cols=287  Identities=23%  Similarity=0.344  Sum_probs=243.5

Q ss_pred             ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeec
Q 019822           19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH   98 (335)
Q Consensus        19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~   98 (335)
                      +|.++| ||+ +|+|+++|+++++|++||+|++.+..+|+.|++|..|.++.|.+...  +|...+|             
T Consensus        53 ~p~i~G-~e~-~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~~~G-------------  115 (347)
T PRK10309         53 YPITLG-HEF-SGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDF--IGSRRDG-------------  115 (347)
T ss_pred             CCcccc-cce-EEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcce--eccCCCC-------------
Confidence            588999 999 99999999999999999999999999999999999999999986543  3433344             


Q ss_pred             ccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEE
Q 019822           99 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKI  178 (335)
Q Consensus        99 ~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V  178 (335)
                           +|+||+.++++.++++|+++++++++++. +++++++++ +...+.++++|||+|+|++|++++|+|+.+|++.|
T Consensus       116 -----~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v  188 (347)
T PRK10309        116 -----GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSV  188 (347)
T ss_pred             -----ccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeE
Confidence                 89999999999999999999999988774 566678764 66788899999999999999999999999999558


Q ss_pred             EEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCcc-EEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          179 IGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD-YCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       179 ~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d-~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      +++++++++++.++++|+++++++++   .+ ...+.+++.+.++| ++|||+|+...+..++++++++ |+++.+|...
T Consensus       189 ~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~  263 (347)
T PRK10309        189 TAIDINSEKLALAKSLGAMQTFNSRE---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLH  263 (347)
T ss_pred             EEECCCHHHHHHHHHcCCceEecCcc---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC
Confidence            99999999999999999999998876   44 45677777777898 9999999877889999999998 9999999765


Q ss_pred             Cccccch---hHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCe-eeE
Q 019822          258 DAMVPLN---VIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKV  331 (335)
Q Consensus       258 ~~~~~~~---~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~-~k~  331 (335)
                      . ..+++   ...++.+++++.|+..+...  ..+++++++++++++++++.++++++|+|+|+++|++.+.+++. .|+
T Consensus       264 ~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKv  342 (347)
T PRK10309        264 H-DLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKV  342 (347)
T ss_pred             C-CcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEE
Confidence            3 22332   23566789999998754321  13578899999999999888899999999999999999988775 499


Q ss_pred             EEeC
Q 019822          332 LITI  335 (335)
Q Consensus       332 vi~~  335 (335)
                      ++++
T Consensus       343 vv~~  346 (347)
T PRK10309        343 LLQI  346 (347)
T ss_pred             EEeC
Confidence            8864

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1e-41  Score=309.79  Aligned_cols=277  Identities=26%  Similarity=0.342  Sum_probs=233.8

Q ss_pred             EEEeEeecC-CCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            5 VTLISFALK-DSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         5 ~d~~~~~g~-~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      .|.+.++|. .+..++|.|+| .|+ +|+|+++|++|+.|++||+|+..+ ..                       +  .
T Consensus        42 ~D~~~r~G~~~~~~~~P~i~G-~d~-aG~V~avG~~V~~~~~GdrV~~~~-~~-----------------------~--~   93 (326)
T COG0604          42 IDVLVRQGLAPPVRPLPFIPG-SEA-AGVVVAVGSGVTGFKVGDRVAALG-GV-----------------------G--R   93 (326)
T ss_pred             HHHHhccCCCCCCCCCCCccc-cee-EEEEEEeCCCCCCcCCCCEEEEcc-CC-----------------------C--C
Confidence            577888887 33457999999 999 999999999999999999998653 10                       0  1


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTV  162 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~v  162 (335)
                                        .|+|+||+.+|++.++++|+++|+++||+++++++|||++|+...+++++++|||+|+ |+|
T Consensus        94 ------------------~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgV  155 (326)
T COG0604          94 ------------------DGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGV  155 (326)
T ss_pred             ------------------CCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchH
Confidence                              2499999999999999999999999999999999999999999899999999999985 999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |.+++||||++|+ .++++..++++.++++++|+++++++++   .+|.+.++++++++++|+|+|++|+. .+..++++
T Consensus       156 G~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~  230 (326)
T COG0604         156 GSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE---EDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAA  230 (326)
T ss_pred             HHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc---ccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHH
Confidence            9999999999998 6777777788888999999999999998   78999999999999999999999998 78899999


Q ss_pred             hccCCeEEEEEccCC-CccccchhHHHhhcCcEEEEeeccCC--C-CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822          243 TKVGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGGI--K-TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK  318 (335)
Q Consensus       243 l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~--~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e  318 (335)
                      ++++ |+++.+|... ....+++...+..+.+...+......  . ..+.+..+.+++++|++++.  +.++|||+|..+
T Consensus       231 l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~  307 (326)
T COG0604         231 LAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPA  307 (326)
T ss_pred             hccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHH
Confidence            9998 9999999987 35566667777778888888776532  1 13456678999999996665  778999999655


Q ss_pred             HHHHhcC-CCe-eeEEEeC
Q 019822          319 AIQLLKQ-PDC-VKVLITI  335 (335)
Q Consensus       319 a~~~~~~-~~~-~k~vi~~  335 (335)
                      +...... ++. .|+|+++
T Consensus       308 a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         308 AAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HHHHHHcccCCcceEEEeC
Confidence            5553322 344 5999874

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=1.3e-40  Score=309.18  Aligned_cols=311  Identities=25%  Similarity=0.359  Sum_probs=256.4

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCc------ccCCCEEEecccCCCCCCcccccCCCCCCcCcccccc
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKE------VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN   79 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~------~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~   79 (335)
                      |++...|.++...+|.++| ||+ +|+|+++|++++.      |++||+|++.+..+|+.|.+|+.+.++.|.+..++  
T Consensus        41 d~~~~~g~~~~~~~p~~~G-~e~-~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~--  116 (361)
T cd08231          41 DVHTVAGRRPRVPLPIILG-HEG-VGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY--  116 (361)
T ss_pred             cHHHhcCCCCCCCCCcccc-cCC-ceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhc--
Confidence            4555567665445788999 999 9999999999986      99999999999999999999999999999987663  


Q ss_pred             ccccCCCccccccCceeecccccccceeeEEeccc-ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc
Q 019822           80 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG  158 (335)
Q Consensus        80 g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G  158 (335)
                      |...+.       +.    ....|+|+||+.++++ +++++|+++++++++++++++.|||+++.+.....++++|||+|
T Consensus       117 ~~~~~~-------~~----~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g  185 (361)
T cd08231         117 GHEASC-------DD----PHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQG  185 (361)
T ss_pred             cccccc-------cC----CCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC
Confidence            432110       00    0012589999999996 89999999999999998889999999986666667999999999


Q ss_pred             CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHH
Q 019822          159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSE  238 (335)
Q Consensus       159 ~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~  238 (335)
                      +|++|++++++|+.+|+++|+++++++++.++++++|++.++++++....++...+++.++++++|++|||+|+...+..
T Consensus       186 ~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~  265 (361)
T cd08231         186 AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPE  265 (361)
T ss_pred             CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHH
Confidence            89999999999999999789999999999999999999999887751112234567888888899999999998667899


Q ss_pred             HHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCC--CCCCCCceeEEeechh
Q 019822          239 ALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK--EFKLHQLLTHHVKLEE  315 (335)
Q Consensus       239 ~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~l~~  315 (335)
                      ++++++++ |+++.+|.... ...+++...++.+++++.++...+   ++++.++++++.++  .+.+.++++++|++++
T Consensus       266 ~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~  341 (361)
T cd08231         266 GLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLED  341 (361)
T ss_pred             HHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHH
Confidence            99999998 99999997643 344566666677899998876433   46788999999888  6667778889999999


Q ss_pred             HHHHHHHhcCCCeeeEEEeC
Q 019822          316 IDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       316 ~~ea~~~~~~~~~~k~vi~~  335 (335)
                      +++||+.+.+++.+|++|.+
T Consensus       342 ~~~a~~~~~~~~~~k~vi~~  361 (361)
T cd08231         342 INEALELAESGTALKVVIDP  361 (361)
T ss_pred             HHHHHHHHHcCCceEEEeCC
Confidence            99999999888777999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=6.9e-41  Score=306.91  Aligned_cols=285  Identities=21%  Similarity=0.265  Sum_probs=240.2

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCcccccccccc
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      .|++.+.|.++...+|.++| ||+ +|+|+++|+++++|++||+|++.+. ..|+.|++|..|.++.|.+..+  .|...
T Consensus        42 ~D~~~~~g~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~~  117 (329)
T TIGR02822        42 TDLHVSEGDLPVHRPRVTPG-HEV-VGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRY--TGWDT  117 (329)
T ss_pred             hhHHHHcCCCCCCCCCccCC-cce-EEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCccc--CCccc
Confidence            35556667765444578999 999 9999999999999999999987664 4799999999999999987655  35444


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      +|                  +|+||+.++++.++++|+++++++++.+++.+.|||+++ ..++++++++|||+|+|++|
T Consensus       118 ~G------------------~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG  178 (329)
T TIGR02822       118 DG------------------GYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSA  178 (329)
T ss_pred             CC------------------cceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHH
Confidence            44                  899999999999999999999999999999999999988 46889999999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+.+|+ +|++++++++++++++++|+++++++.+   ..          ..++|+++++.+....+..+++++
T Consensus       179 ~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~---~~----------~~~~d~~i~~~~~~~~~~~~~~~l  244 (329)
T TIGR02822       179 HLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYD---TP----------PEPLDAAILFAPAGGLVPPALEAL  244 (329)
T ss_pred             HHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccc---cC----------cccceEEEECCCcHHHHHHHHHhh
Confidence            999999999999 8999999999999999999999987543   11          126899999888777889999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      +++ |+++.+|...+...+++...++.+++++.++...   .+.++.++++++.+++++   +++++|+|+|+++|++.+
T Consensus       245 ~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~  317 (329)
T TIGR02822       245 DRG-GVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSN---TRADAREFLELAAQHGVR---VTTHTYPLSEADRALRDL  317 (329)
T ss_pred             CCC-cEEEEEeccCccCCCCCHHHHhhCCcEEEEeecC---CHHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHH
Confidence            997 9999999754323356666667789999887533   245688899999999975   367899999999999999


Q ss_pred             cCCCee-eEEE
Q 019822          324 KQPDCV-KVLI  333 (335)
Q Consensus       324 ~~~~~~-k~vi  333 (335)
                      .+++.. |+||
T Consensus       318 ~~~~~~Gkvvl  328 (329)
T TIGR02822       318 KAGRFDGAAVL  328 (329)
T ss_pred             HcCCCceEEEe
Confidence            888765 8886

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=2.1e-40  Score=308.11  Aligned_cols=320  Identities=38%  Similarity=0.643  Sum_probs=274.2

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc-ccccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~-~~g~~~~   84 (335)
                      |++.+.|.++ ..+|.++| ||+ +|+|+++|++++.+++||+|++.+...|+.|++|++|.++.|...... ..|...+
T Consensus        41 d~~~~~g~~~-~~~~~i~g-~e~-~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  117 (365)
T cd05279          41 DLHVIDGKLP-TPLPVILG-HEG-AGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSD  117 (365)
T ss_pred             hHHHhcCCCC-CCCCcccc-cce-eEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccC
Confidence            4555556554 24678999 999 999999999999999999999998899999999999999999987653 2455677


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      |+.+++-+|...++..+.|+|++|+.++++.++++|+++++++++++++++.+||+++.+.+++.++++|||+|+|++|+
T Consensus       118 ~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~  197 (365)
T cd05279         118 GTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGL  197 (365)
T ss_pred             CcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence            88888888887777777789999999999999999999999999999989999999988888999999999998899999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCch--hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK--SISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~--~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      +++++|+.+|+..|+++++++++.+.++++|+++++++++   .  ++.+.++++++ +++|+++|++|....+..++++
T Consensus       198 ~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~  273 (365)
T cd05279         198 SVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD---QDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDA  273 (365)
T ss_pred             HHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc---ccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHH
Confidence            9999999999956888888999999999999999998876   4  67777888775 5899999999876688999999


Q ss_pred             hc-cCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822          243 TK-VGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI  320 (335)
Q Consensus       243 l~-~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~  320 (335)
                      ++ ++ |+++.+|.... ...+++...+ .++.++.|+..++....+.+..++++++++.+++.++.+++++++++++||
T Consensus       274 l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~  351 (365)
T cd05279         274 TRLGG-GTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGF  351 (365)
T ss_pred             hccCC-CEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHH
Confidence            99 97 99999987542 3456666666 588888888766655567888999999999988776788999999999999


Q ss_pred             HHhcCCCeeeEEEe
Q 019822          321 QLLKQPDCVKVLIT  334 (335)
Q Consensus       321 ~~~~~~~~~k~vi~  334 (335)
                      +.+.+++..|+++.
T Consensus       352 ~~~~~~~~~~~~~~  365 (365)
T cd05279         352 DLMRSGESIRTILT  365 (365)
T ss_pred             HHHhCCCceeeeeC
Confidence            99988777787763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=2.9e-39  Score=301.09  Aligned_cols=324  Identities=37%  Similarity=0.642  Sum_probs=258.4

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-ccccc
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML   83 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~   83 (335)
                      .|++.+.|.++ ..+|.++| ||+ +|+|+++|++++.+++||+|++.+..+|+.|++|.++.++.|.+..... .|...
T Consensus        47 ~D~~~~~g~~~-~~~p~v~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~  123 (373)
T cd08299          47 SDDHVVSGKLV-TPFPVILG-HEA-AGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQ  123 (373)
T ss_pred             ccHHHhcCCCC-CCCCcccc-ccc-eEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCccccccccccc
Confidence            35556666653 34688999 999 9999999999999999999999888999999999999999998754310 12222


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      ++..++..+|...++..+.|+|+||+.++++.++++|+++++++++++++++.|||+++.....++++++|||+|+|++|
T Consensus       124 ~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG  203 (373)
T cd08299         124 DGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVG  203 (373)
T ss_pred             CCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHH
Confidence            22222333333333333357999999999999999999999999999999999999998888899999999999989999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++++|+.+|+++|+++++++++++.++++|++++++..+ ...++...+++++++ ++|+++||+|++..+..++..+
T Consensus       204 ~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~-~~d~vld~~g~~~~~~~~~~~~  281 (373)
T cd08299         204 LSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQD-YKKPIQEVLTEMTDG-GVDFSFEVIGRLDTMKAALASC  281 (373)
T ss_pred             HHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc-cchhHHHHHHHHhCC-CCeEEEECCCCcHHHHHHHHhh
Confidence            99999999999867999999999999999999999998764 112367777777764 8999999999766777766655


Q ss_pred             -ccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          244 -KVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       244 -~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                       +.+ |+++.+|.... ...+++...+ .++.++.++..+.+....++..+++.+.++.+++.+++++.|+++++++||+
T Consensus       282 ~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~  359 (373)
T cd08299         282 HEGY-GVSVIVGVPPSSQNLSINPMLL-LTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFD  359 (373)
T ss_pred             ccCC-CEEEEEccCCCCceeecCHHHH-hcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHH
Confidence             566 99999997653 2344554433 3678888887766544466777888888887777777889999999999999


Q ss_pred             HhcCCCeeeEEEeC
Q 019822          322 LLKQPDCVKVLITI  335 (335)
Q Consensus       322 ~~~~~~~~k~vi~~  335 (335)
                      .+.+++..|+++++
T Consensus       360 ~~~~~~~~k~~~~~  373 (373)
T cd08299         360 LLRSGKSIRTVLTF  373 (373)
T ss_pred             HHhCCCcceEEEeC
Confidence            99887777988864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=5.9e-39  Score=297.01  Aligned_cols=284  Identities=25%  Similarity=0.417  Sum_probs=249.0

Q ss_pred             ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc-CCCccccccCceee
Q 019822           19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML-DSTSRMSVRGQKLY   97 (335)
Q Consensus        19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~-~g~~~~~~~~~~~~   97 (335)
                      +|.++| ||+ +|+|+++|++++.|++||+|+..+..+|+.|.+|++|.++.|.+..+  .|+.. +             
T Consensus        64 ~p~i~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------------  126 (351)
T cd08233          64 APVTLG-HEF-SGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF--IGLGGGG-------------  126 (351)
T ss_pred             CCceec-ccc-eEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce--eccCCCC-------------
Confidence            688999 999 99999999999999999999999999999999999999999986533  23221 2             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK  177 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~  177 (335)
                           |+|++|+.++.+.++++|+++++++++++ .++.|||+++ ...++.++++|||+|+|.+|++++|+|+.+|+++
T Consensus       127 -----g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~  199 (351)
T cd08233         127 -----GGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASK  199 (351)
T ss_pred             -----CceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence                 38999999999999999999999998776 5788999988 7788999999999999999999999999999978


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      |+++++++++.++++++|++.++++++   .++.+.++++++++++|+++|++|+...++.++++++++ |+++.+|...
T Consensus       200 v~~~~~~~~~~~~~~~~ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  275 (351)
T cd08233         200 IIVSEPSEARRELAEELGATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE  275 (351)
T ss_pred             EEEECCCHHHHHHHHHhCCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC
Confidence            999999999999999999999999887   778888988888778999999999776889999999997 9999999866


Q ss_pred             CccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhH-HHHHHHhcCCCe--eeEEEe
Q 019822          258 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI-DKAIQLLKQPDC--VKVLIT  334 (335)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~-~ea~~~~~~~~~--~k~vi~  334 (335)
                       ...+++...+..+++++.++...   ..+++.+++++++++++++.++++++|+++|+ ++|++.+.+++.  +|++|.
T Consensus       276 -~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         276 -KPISFNPNDLVLKEKTLTGSICY---TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             -CCCccCHHHHHhhCcEEEEEecc---CcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence             45667777777899999987643   24789999999999999887788899999996 799999888774  698873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2.6e-39  Score=299.84  Aligned_cols=294  Identities=27%  Similarity=0.333  Sum_probs=230.8

Q ss_pred             EEEeEeecCCCC---CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccc
Q 019822            5 VTLISFALKDSQ---RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL   81 (335)
Q Consensus         5 ~d~~~~~g~~~~---~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~   81 (335)
                      .|++.+.|.++.   ..+|.++| ||+ +|+|+++|++ +.|++||+|+..+...|+.|.+|+.|.++.|+...+...|.
T Consensus        40 ~D~~~~~g~~~~~~~~~~p~i~G-~e~-~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~  116 (355)
T cd08230          40 TDREIVAGEYGTAPPGEDFLVLG-HEA-LGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGI  116 (355)
T ss_pred             ccHHHHcCCCCCCCCCCCCeeec-ccc-ceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCc
Confidence            466667776543   24689999 999 9999999999 89999999999998899999999999999998754321222


Q ss_pred             c-cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHH------hcCCCCCCEE
Q 019822           82 M-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK------EAKVEKGSSV  154 (335)
Q Consensus        82 ~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~------~~~~~~~~~V  154 (335)
                      . .+                  |+|+||+.++++.++++|++++ +. +++..++++++.++..      ..+..++++|
T Consensus       117 ~~~~------------------G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~v  176 (355)
T cd08230         117 KGLH------------------GFMREYFVDDPEYLVKVPPSLA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRA  176 (355)
T ss_pred             CCCC------------------ccceeEEEeccccEEECCCCCC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEE
Confidence            1 22                  4899999999999999999998 43 4444466655544322      2235689999


Q ss_pred             EEEcCCHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          155 AVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       155 lI~G~g~vG~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      ||+|+|++|++++|+||++|+ +|+++++   ++++++.++++|++. +++.+   .++.+ .+ .  ..++|+||||+|
T Consensus       177 lI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~---~~~~~-~~-~--~~~~d~vid~~g  247 (355)
T cd08230         177 LVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK---TPVAE-VK-L--VGEFDLIIEATG  247 (355)
T ss_pred             EEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc---cchhh-hh-h--cCCCCEEEECcC
Confidence            999999999999999999999 8999987   688999999999987 45554   34433 22 1  237999999999


Q ss_pred             ChHHHHHHHHhhccCCeEEEEEccCCC-ccccch----hHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCC----C
Q 019822          232 VPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLN----VIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF----K  302 (335)
Q Consensus       232 ~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~----~  302 (335)
                      ++..+..+++.++++ |+++.+|...+ ...+++    ...++.+++++.|+..++   +++++.+++++.++.+    .
T Consensus       248 ~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~  323 (355)
T cd08230         248 VPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGV  323 (355)
T ss_pred             CHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc---hhhHHHHHHHHHhcccccccc
Confidence            876789999999998 99999998764 344454    345677999999976433   4678899999988762    3


Q ss_pred             CCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          303 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       303 ~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      +.++++++|+++|+++||+.+.++. .|+++++
T Consensus       324 ~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~  355 (355)
T cd08230         324 LERLITRRVPLEEFAEALTEKPDGE-IKVVIEW  355 (355)
T ss_pred             hHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence            5667899999999999999887654 5999874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=2e-40  Score=276.42  Aligned_cols=274  Identities=24%  Similarity=0.263  Sum_probs=235.0

Q ss_pred             EEEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            4 FVTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         4 ~~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |.|.+.++|.|...++|+++| -|. +|+|+++|++|+++++||||....                             +
T Consensus        49 fid~y~RkGlY~~~plPytpG-mEa-aGvVvAvG~gvtdrkvGDrVayl~-----------------------------~   97 (336)
T KOG1197|consen   49 FIDLYFRKGLYDPAPLPYTPG-MEA-AGVVVAVGEGVTDRKVGDRVAYLN-----------------------------P   97 (336)
T ss_pred             HHHHHHhccccCCCCCCcCCC-ccc-ceEEEEecCCccccccccEEEEec-----------------------------c
Confidence            467788899996667999999 999 999999999999999999997431                             2


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTV  162 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~v  162 (335)
                      .                  |.|+|++.+|...++++|+.+++.+||++...+.|||.-+++...+++|++|||+.+ |++
T Consensus        98 ~------------------g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGV  159 (336)
T KOG1197|consen   98 F------------------GAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGV  159 (336)
T ss_pred             c------------------hhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccH
Confidence            2                  389999999999999999999999999999899999999988899999999999964 999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |+++.||++..|+ .++++..+.+|++.+++.|+.|+++++.   +|+...++++++|+|+|+++|.+|.. .+...+.+
T Consensus       160 Glll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl~~  234 (336)
T KOG1197|consen  160 GLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKD-TFAKSLAA  234 (336)
T ss_pred             HHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc---hhHHHHHHhccCCCCceeeeccccch-hhHHHHHH
Confidence            9999999999999 9999999999999999999999999998   99999999999999999999999998 88999999


Q ss_pred             hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEe-eccCCCCcCc----HHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT-TFGGIKTKSD----LPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      |++. |.++.+|..++...+++...+.-+.+.+... .+|-...+..    ..+++.++.++.+++.  +.++|||+++.
T Consensus       235 Lk~~-G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~va  311 (336)
T KOG1197|consen  235 LKPM-GKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVA  311 (336)
T ss_pred             hccC-ceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHH
Confidence            9998 9999999988843444444444455544432 2222222222    3467788889997777  88999999999


Q ss_pred             HHHHHhcCCCee-eEEEe
Q 019822          318 KAIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       318 ea~~~~~~~~~~-k~vi~  334 (335)
                      +|+.++++.... |+++.
T Consensus       312 dA~~diesrktvGkvlLl  329 (336)
T KOG1197|consen  312 DAHADIESRKTVGKVLLL  329 (336)
T ss_pred             HHHHHHHhhhccceEEEe
Confidence            999999987765 88874

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.4e-38  Score=295.00  Aligned_cols=298  Identities=24%  Similarity=0.388  Sum_probs=239.1

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++++.|++||+|++.+. ..|+.|.+|++|.++.|.+..+...+....
T Consensus        50 D~~~~~g~~~~~~~p~i~G-~E~-~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~  127 (357)
T PLN02514         50 DLHQIKNDLGMSNYPMVPG-HEV-VGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTD  127 (357)
T ss_pred             HHHhhcCCcCcCCCCccCC-cee-eEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccC
Confidence            5555667665445789999 999 9999999999999999999986654 369999999999999998753210000000


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      |        .     ...|+|+||+.+++..++++|+++++++++++++.+.|||+++......+++++|+|+|+|++|+
T Consensus       128 g--------~-----~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~  194 (357)
T PLN02514        128 G--------K-----PTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGH  194 (357)
T ss_pred             C--------c-----cCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHH
Confidence            0        0     01248999999999999999999999999999999999999886655568999999999899999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      +++|+|+.+|+ +|+++++++++++.+ +++|+++++++.+   .   ..+++.+.  ++|++||++|....++.+++++
T Consensus       195 ~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~---~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l  265 (357)
T PLN02514        195 MGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSD---A---AEMQEAAD--SLDYIIDTVPVFHPLEPYLSLL  265 (357)
T ss_pred             HHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCC---h---HHHHHhcC--CCcEEEECCCchHHHHHHHHHh
Confidence            99999999999 888888777776554 6799988776654   2   23444443  6999999999766889999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      +++ |+++.+|.... ..+++...++.+++++.|+..++   ..++.++++++.++++.  +++ ++|||+|+.+||+.+
T Consensus       266 ~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~  337 (357)
T PLN02514        266 KLD-GKLILMGVINT-PLQFVTPMLMLGRKVITGSFIGS---MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERL  337 (357)
T ss_pred             ccC-CEEEEECCCCC-CCcccHHHHhhCCcEEEEEecCC---HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHH
Confidence            998 99999998653 45666777778999999987544   35789999999999854  445 589999999999999


Q ss_pred             cCCCee-eEEEeC
Q 019822          324 KQPDCV-KVLITI  335 (335)
Q Consensus       324 ~~~~~~-k~vi~~  335 (335)
                      .+++.. |+++.+
T Consensus       338 ~~~~~~gk~v~~~  350 (357)
T PLN02514        338 EKNDVRYRFVVDV  350 (357)
T ss_pred             HcCCCceeEEEEc
Confidence            888764 888864

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=1.2e-37  Score=289.60  Aligned_cols=321  Identities=34%  Similarity=0.556  Sum_probs=261.4

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++ ..+|.++| ||+ +|+|+++|++++.|++||+|+..+...|+.|.+|+++..+.|+...++.+|...++
T Consensus        41 d~~~~~g~~~-~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (363)
T cd08279          41 DLHVVTGDLP-APLPAVLG-HEG-AGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDG  117 (363)
T ss_pred             HHHHhcCCCC-CCCCcccc-ccc-eEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCC
Confidence            3444455554 34677899 999 99999999999999999999999999999999999999999997765434433332


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                      .+++...|...+...+.|+|++|+.++++.++++|+++++++++++++.+.+||.++++..++.++++|||+|+|.+|++
T Consensus       118 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a  197 (363)
T cd08279         118 TRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLN  197 (363)
T ss_pred             cccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHH
Confidence            22222212221111233589999999999999999999999999999999999999888889999999999988999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++++|+.+|+.+|+++++++++.+.++++|++++++++.   .++...+++++.++++|+++|++++...+..+++++++
T Consensus       198 ~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~---~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~  274 (363)
T cd08279         198 AIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE---DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRK  274 (363)
T ss_pred             HHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC---ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhc
Confidence            999999999955999999999999999999999998886   67888888887777899999999976688999999999


Q ss_pred             CCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822          246 GKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK  324 (335)
Q Consensus       246 ~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~  324 (335)
                      + |+++.++.... ....++...+..++..+.++.++.......++.++++++++.+++.++++++++++++++||+.+.
T Consensus       275 ~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~  353 (363)
T cd08279         275 G-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADML  353 (363)
T ss_pred             C-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHh
Confidence            7 99999987653 345566666666788888876544334567889999999999877666778999999999999998


Q ss_pred             CCCeeeEEE
Q 019822          325 QPDCVKVLI  333 (335)
Q Consensus       325 ~~~~~k~vi  333 (335)
                      +++..|.|+
T Consensus       354 ~~~~~~~~~  362 (363)
T cd08279         354 AGENARGVI  362 (363)
T ss_pred             cCCceeEEe
Confidence            887776665

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.3e-37  Score=288.11  Aligned_cols=304  Identities=24%  Similarity=0.348  Sum_probs=247.7

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++++++++||+|+..+...|+.|..|..|+++.|.+...   |+... 
T Consensus        40 d~~~~~g~~~~~~~~~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~---~~~~~-  113 (351)
T cd08285          40 DVHTVWGGAPGERHGMILG-HEA-VGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLG---GWKFS-  113 (351)
T ss_pred             hHHHhcCCCCCCCCCcccC-cce-EEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCC---Ccccc-
Confidence            4555566655556689999 999 99999999999999999999998888999999999999999986431   11100 


Q ss_pred             CccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                                   ....|+|++|+.++.+  .++++|++++++++++++..+.|||+++ +.++++++++|||+|+|++|
T Consensus       114 -------------~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG  179 (351)
T cd08285         114 -------------NFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVG  179 (351)
T ss_pred             -------------CCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHH
Confidence                         0012489999999974  8999999999999999988999999985 77889999999999889999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+.+|+..|+++++++++.+.++++|+++++++++   .++...+.++++++++|+++|++|++..+..+++++
T Consensus       180 ~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l  256 (351)
T cd08285         180 LMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVL  256 (351)
T ss_pred             HHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHh
Confidence            99999999999967999999999999999999999999886   678888888887779999999999876889999999


Q ss_pred             ccCCeEEEEEccCCC-ccccchh--HHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCc-eeEEeechhHHHH
Q 019822          244 KVGKGKVIVIGVGVD-AMVPLNV--IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQL-LTHHVKLEEIDKA  319 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~-~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~l~~~~ea  319 (335)
                      +++ |+++.+|.... ...+++.  .....+...+.+....  ..++++.++++++.+|++++.++ .++.++++++++|
T Consensus       257 ~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a  333 (351)
T cd08285         257 KPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP--GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEA  333 (351)
T ss_pred             hcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC--CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHH
Confidence            997 99999987654 2233332  2223456666654321  13467899999999999888544 4456899999999


Q ss_pred             HHHhcCCC--eeeEEEeC
Q 019822          320 IQLLKQPD--CVKVLITI  335 (335)
Q Consensus       320 ~~~~~~~~--~~k~vi~~  335 (335)
                      |+.+.+++  .+|+++++
T Consensus       334 ~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         334 LMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             HHHHhcccCCeEEEEEeC
Confidence            99998876  36999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.1e-37  Score=289.90  Aligned_cols=320  Identities=30%  Similarity=0.484  Sum_probs=254.4

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-ccccc
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML   83 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~   83 (335)
                      .|++.+.|.++ ..+|.++| ||+ +|+|+++|+++..|++||+|++.+. .|+.|.+|+.+..+.|.+..... .|..+
T Consensus        42 ~d~~~~~g~~~-~~~p~v~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (365)
T cd08278          42 TDLVVRDGGLP-TPLPAVLG-HEG-AGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRP  117 (365)
T ss_pred             ccHHHhcCCCC-CCCCcccc-cce-eEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCccccccccccc
Confidence            35555666655 34678999 999 9999999999999999999998775 89999999999999998643321 12111


Q ss_pred             CCCccccccCcee--ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCH
Q 019822           84 DSTSRMSVRGQKL--YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT  161 (335)
Q Consensus        84 ~g~~~~~~~~~~~--~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~  161 (335)
                      +|..-....+.+.  .+....|+|++|+.++++.++++|+++++++++.+++++.||+.++.+...+.++++|||+|+|+
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~  197 (365)
T cd08278         118 DGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGA  197 (365)
T ss_pred             CCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCH
Confidence            1100000000000  00123468999999999999999999999999999999999999988888899999999998899


Q ss_pred             HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822          162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE  241 (335)
Q Consensus       162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~  241 (335)
                      +|++++++|+++|++.|+++++++++.+.++++|++.++++++   .++.+.+++++ +.++|+++||+|+...+..+++
T Consensus       198 vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~---~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~  273 (365)
T cd08278         198 VGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKE---EDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVD  273 (365)
T ss_pred             HHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHH
Confidence            9999999999999967999999999999999999999999876   67778888877 6699999999997668899999


Q ss_pred             hhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822          242 TTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI  320 (335)
Q Consensus       242 ~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~  320 (335)
                      +++++ |+++.+|.... ....++...+..+++++.++........+.+.+++++++++++++.+++ +.++++++++|+
T Consensus       274 ~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~  351 (365)
T cd08278         274 ALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAI  351 (365)
T ss_pred             HhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHH
Confidence            99998 99999997632 3455666666568899988765433233557888999999998654444 589999999999


Q ss_pred             HHhcCCCeeeEEEe
Q 019822          321 QLLKQPDCVKVLIT  334 (335)
Q Consensus       321 ~~~~~~~~~k~vi~  334 (335)
                      +.+.+++..|++++
T Consensus       352 ~~~~~~~~~k~~~~  365 (365)
T cd08278         352 ADSESGKVIKPVLR  365 (365)
T ss_pred             HHHHCCCceEEEEC
Confidence            99988877898874

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4e-37  Score=282.74  Aligned_cols=291  Identities=20%  Similarity=0.311  Sum_probs=245.7

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|..+...+|.++| ||+ +|+|+++|+++..|++||+|++.+ ...|+.|.+|..|+++.|....+  .|+..+
T Consensus        41 d~~~~~g~~~~~~~p~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~--~~~~~~  116 (333)
T cd08296          41 DAFVKEGAMPGLSYPRVPG-HEV-VGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKV--TGVTRD  116 (333)
T ss_pred             HHHHHhCCCCCCCCCcccC-cce-eEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCc--cCcccC
Confidence            4445566655445688999 999 999999999999999999998754 56899999999999999998765  344333


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      |                  ++++|+.++.+.++++|+++++++++.+++.+.|||+++. ...+.++++|||+|+|.+|+
T Consensus       117 g------------------~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~  177 (333)
T cd08296         117 G------------------GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGH  177 (333)
T ss_pred             C------------------cceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHH
Confidence            4                  8999999999999999999999999999999999999874 45899999999999999999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++++|+.+|+ +|+++++++++++.++++|+++++++++   .++...++++   .++|+++|++|....+..++++++
T Consensus       178 ~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~---~~~d~vi~~~g~~~~~~~~~~~l~  250 (333)
T cd08296         178 LAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK---EDVAEALQEL---GGAKLILATAPNAKAISALVGGLA  250 (333)
T ss_pred             HHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC---ccHHHHHHhc---CCCCEEEECCCchHHHHHHHHHcc
Confidence            99999999999 8999999999999999999999998876   6677777665   279999999976668899999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK  324 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~  324 (335)
                      ++ |+++.+|... ...+++...++.+++++.++..+.   ..++..+++++.+++++.  .+ +.++++++.+||+.+.
T Consensus       251 ~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~  322 (333)
T cd08296         251 PR-GKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSGT---ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMM  322 (333)
T ss_pred             cC-CEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcCC---HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHH
Confidence            98 9999999865 355666666777999999986432   356888889988887553  34 5899999999999998


Q ss_pred             CCCee-eEEEe
Q 019822          325 QPDCV-KVLIT  334 (335)
Q Consensus       325 ~~~~~-k~vi~  334 (335)
                      +++.. |++++
T Consensus       323 ~~~~~gk~v~~  333 (333)
T cd08296         323 SGKARFRVVLT  333 (333)
T ss_pred             CCCCceeEEeC
Confidence            88764 88874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=7.9e-38  Score=288.16  Aligned_cols=284  Identities=18%  Similarity=0.191  Sum_probs=221.8

Q ss_pred             EEEeEeecCCCC----CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccc
Q 019822            5 VTLISFALKDSQ----RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG   80 (335)
Q Consensus         5 ~d~~~~~g~~~~----~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g   80 (335)
                      .|++.++|.++.    ..+|.++| ||+ +|+|+++|.+  .|++||+|++.+...|+ |++|  +..+.|.+..+  .|
T Consensus        40 sD~~~~~G~~~~~~~~~~~P~i~G-hE~-~G~V~~~g~~--~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~--~g  110 (341)
T cd08237          40 ADQRYYQGNRSPEALKKKLPMALI-HEG-IGVVVSDPTG--TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF--RS  110 (341)
T ss_pred             ccHHHHcCCCCcccccCCCCeecc-cee-EEEEEeeCCC--ccCCCCEEEECCCCCch-hccc--chhccCCCcce--eE
Confidence            477888887642    35799999 999 9999998875  69999999998887777 5566  35677876544  23


Q ss_pred             cccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHH--hcCCCCCCEEEEEc
Q 019822           81 LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK--EAKVEKGSSVAVLG  158 (335)
Q Consensus        81 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~~~~VlI~G  158 (335)
                      ...+|                  +|+||+.+|++.++++|+++++++|+++. +++++|+++..  .+.++++++|||+|
T Consensus       111 ~~~~G------------------~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G  171 (341)
T cd08237         111 SGYDG------------------FMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWG  171 (341)
T ss_pred             ecCCC------------------ceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEEC
Confidence            33334                  89999999999999999999998877554 88899998754  34568899999999


Q ss_pred             CCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC---hH
Q 019822          159 LGTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV---PS  234 (335)
Q Consensus       159 ~g~vG~~ai~la~~-~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~---~~  234 (335)
                      +|++|++++|+++. +|..+|++++++++|++.+++.++..+++       ++       ....++|+|||++|+   +.
T Consensus       172 ~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~-------~~-------~~~~g~d~viD~~G~~~~~~  237 (341)
T cd08237         172 DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID-------DI-------PEDLAVDHAFECVGGRGSQS  237 (341)
T ss_pred             CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh-------hh-------hhccCCcEEEECCCCCccHH
Confidence            99999999999986 66558999999999999998766543221       11       112369999999994   45


Q ss_pred             HHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCC---CCCCCCceeEEe
Q 019822          235 LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK---EFKLHQLLTHHV  311 (335)
Q Consensus       235 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~  311 (335)
                      .+..++++++++ |+++.+|... ...+++...++.+++++.|+..++   ..+++++++++.++   +.++.++++++|
T Consensus       238 ~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~  312 (341)
T cd08237         238 AINQIIDYIRPQ-GTIGLMGVSE-YPVPINTRMVLEKGLTLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVF  312 (341)
T ss_pred             HHHHHHHhCcCC-cEEEEEeecC-CCcccCHHHHhhCceEEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhcccc
Confidence            789999999998 9999999754 345667777778999999986432   45789999999998   335777889999


Q ss_pred             ec---hhHHHHHHHhcCCCeeeEEEeC
Q 019822          312 KL---EEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       312 ~l---~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      +|   ++++++|+.+.++...|++|++
T Consensus       313 ~l~~l~~~~~a~~~~~~~~~gKvvi~~  339 (341)
T cd08237         313 PVRSINDIHRAFESDLTNSWGKTVMEW  339 (341)
T ss_pred             ccccHHHHHHHHHHHhhcCcceEEEEe
Confidence            98   5677777777655456998864

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.6e-36  Score=283.99  Aligned_cols=316  Identities=27%  Similarity=0.370  Sum_probs=253.1

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-----c
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-----N   79 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-----~   79 (335)
                      .|++.+.|.++..++|.++| ||+ +|+|+++|+++..+++||+|++.+...|+.|++|..+.+++|.+.....     +
T Consensus        40 ~d~~~~~g~~~~~~~p~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (386)
T cd08283          40 SDLHLYHGYIPGMKKGDILG-HEF-MGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLY  117 (386)
T ss_pred             hhhhhhcCCCCCCCCCcccc-ccc-eEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCccccccccccc
Confidence            46667778776656789999 999 9999999999999999999999988899999999999999999765431     1


Q ss_pred             ccccCCCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           80 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        80 g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                      |....+     ..|.........|++++|+.++++  .++++|++++++++++++..+.|||+++ +...+.++++|||+
T Consensus       118 ~~~~~~-----~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~  191 (386)
T cd08283         118 GHAGAG-----IFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVW  191 (386)
T ss_pred             cccccc-----ccccccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEE
Confidence            111100     000000000013589999999988  8999999999999999998999999998 78889999999999


Q ss_pred             cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCch-hHHHHHHhhhCCCCccEEEEcCCCh---
Q 019822          158 GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGVP---  233 (335)
Q Consensus       158 G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~-~~~~~i~~~~~g~g~d~vid~~g~~---  233 (335)
                      |+|++|.+++++|+..|+.+|+++++++++.+.+++++...++++..   . ++...++++++++++|++||++|+.   
T Consensus       192 g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~  268 (386)
T cd08283         192 GCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHG  268 (386)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccc
Confidence            88999999999999999856999999999999999985446777765   4 4788888888877899999999752   


Q ss_pred             ------------------HHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHH
Q 019822          234 ------------------SLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDK  295 (335)
Q Consensus       234 ------------------~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  295 (335)
                                        ..+..++++++++ |+++.+|........++...+..+++++.+....   ..+.+..++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~  344 (386)
T cd08283         269 SPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLEL  344 (386)
T ss_pred             cccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCCcCccCHHHHHhCCcEEEeccCC---chHHHHHHHHH
Confidence                              3678899999998 9999998765423344554556688888886522   24568889999


Q ss_pred             HhCCCCCCCCceeEEeechhHHHHHHHhcCCC--eeeEEEeC
Q 019822          296 CKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVLITI  335 (335)
Q Consensus       296 i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~--~~k~vi~~  335 (335)
                      +.++++.+.+++++.++++++++|++.+.+++  ..|++|++
T Consensus       345 l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         345 IESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             HHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            99999887666778999999999999988765  35999863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.9e-36  Score=279.51  Aligned_cols=301  Identities=28%  Similarity=0.377  Sum_probs=252.6

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      .|++.+.|.++...+|.++| ||+ +|+|+++|++++.+++||+|+..+...|+.|++|..+.++.|...... .|...+
T Consensus        40 ~d~~~~~g~~~~~~~~~~~g-~e~-~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  116 (345)
T cd08286          40 TDLHILKGDVPTVTPGRILG-HEG-VGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWI-LGNLID  116 (345)
T ss_pred             hhhHHHcCCCCCCCCCceec-ccc-eEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccc-cccccC
Confidence            35555667766555688999 999 999999999999999999999999889999999999999999865332 122223


Q ss_pred             CCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                                        |++++|+.++.+  .++++|++++..+++.+++.++|||.++....++.++++|||.|+|.+
T Consensus       117 ------------------g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~  178 (345)
T cd08286         117 ------------------GTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPV  178 (345)
T ss_pred             ------------------CeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHH
Confidence                              389999999987  899999999999999999899999998777888999999999988999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |.+++|+|+.+|+.+|+++++++++.+.++++|++.++++++   .++...+.++++++++|+++|+++....++.+++.
T Consensus       179 g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~  255 (345)
T cd08286         179 GLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQEL  255 (345)
T ss_pred             HHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHh
Confidence            999999999999448999999999999999999999999886   66777888888777999999999987688899999


Q ss_pred             hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      ++++ |+++.+|.... ...+++..++.+++++.+....    ...+..++++++++.+++.++++++++++++++|++.
T Consensus       256 l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~  329 (345)
T cd08286         256 VAPG-GHIANVGVHGK-PVDLHLEKLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDT  329 (345)
T ss_pred             ccCC-cEEEEecccCC-CCCcCHHHHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHH
Confidence            9998 99999986543 3455665656688888875321    2467889999999998876667889999999999999


Q ss_pred             hcCC---CeeeEEEeC
Q 019822          323 LKQP---DCVKVLITI  335 (335)
Q Consensus       323 ~~~~---~~~k~vi~~  335 (335)
                      +.+.   ...|++|++
T Consensus       330 ~~~~~~~~~~k~~~~~  345 (345)
T cd08286         330 FSAAAKHKALKVIIDF  345 (345)
T ss_pred             HhccCCCCeeEEEEeC
Confidence            9875   356999875

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.3e-36  Score=280.64  Aligned_cols=302  Identities=29%  Similarity=0.388  Sum_probs=248.5

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccc-ccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~-g~~~~   84 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++++.+++||+|+..+...|+.|.+|.+|+.+.|.....+.+ +... 
T Consensus        41 d~~~~~g~~~~~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  117 (347)
T cd05278          41 DLHIYRGGVPGAKHGMILG-HEF-VGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRI-  117 (347)
T ss_pred             hHHHHcCCCCCCCCCceec-cce-EEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCC-
Confidence            5556677776666789999 999 99999999999999999999999999999999999999999987654311 1111 


Q ss_pred             CCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                                       .|+|++|+.++++  +++++|+++++++++++++++.|||+++ ...++.++++|||.|+|.+
T Consensus       118 -----------------~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~v  179 (347)
T cd05278         118 -----------------DGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPV  179 (347)
T ss_pred             -----------------CCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHH
Confidence                             2489999999987  9999999999999999999999999987 6788999999999888999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |.+++|+|+.+|..+|+++++++++.+.++++|++.+++++.   .++...++++++++++|++||++++...+...+++
T Consensus       180 g~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~  256 (347)
T cd05278         180 GLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKV  256 (347)
T ss_pred             HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHH
Confidence            999999999999658889988888999999999999999887   66888888887777999999999985578999999


Q ss_pred             hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      ++++ |+++.+|..............+.+++++.++....   .+.++.+++++.++.+++.+++.+.++++++++|++.
T Consensus       257 l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~  332 (347)
T cd05278         257 VRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRL  332 (347)
T ss_pred             hhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHH
Confidence            9998 99999986543211111112234777777654322   4578889999999998866556678999999999999


Q ss_pred             hcCCCe--eeEEEeC
Q 019822          323 LKQPDC--VKVLITI  335 (335)
Q Consensus       323 ~~~~~~--~k~vi~~  335 (335)
                      +.+++.  .|++++.
T Consensus       333 ~~~~~~~~~~~vv~~  347 (347)
T cd05278         333 FDNKPDGCIKVVIRP  347 (347)
T ss_pred             HhcCCCCceEEEecC
Confidence            887765  4888763

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1.8e-36  Score=279.14  Aligned_cols=294  Identities=23%  Similarity=0.359  Sum_probs=249.4

Q ss_pred             EEeEeecCCC---CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc
Q 019822            6 TLISFALKDS---QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM   82 (335)
Q Consensus         6 d~~~~~g~~~---~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~   82 (335)
                      |++.+.|.++   ...+|.++| ||+ +|+|+++|+++..|++||+|+..+...|+.|+.|+.|..++|.+.++  .|+.
T Consensus        41 d~~~~~g~~~~~~~~~~~~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  116 (340)
T cd05284          41 DLHVIDGVWGGILPYKLPFTLG-HEN-AGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARF--PGIG  116 (340)
T ss_pred             hHHHHcCCCcccccCCCCeecc-cce-eEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcc--cCcc
Confidence            4444556554   235688999 999 99999999999999999999999888999999999999999998877  3554


Q ss_pred             cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHh-cCCCCCCEEEEEcCCH
Q 019822           83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGT  161 (335)
Q Consensus        83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~~~~~VlI~G~g~  161 (335)
                      .+|                  +|++|+.+++++++++|+++++++++.+++.+.|||+++... ..+.++++|||+|+|.
T Consensus       117 ~~g------------------~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~  178 (340)
T cd05284         117 TDG------------------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGG  178 (340)
T ss_pred             CCC------------------cceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcH
Confidence            454                  899999999999999999999999999999999999998765 4688899999999978


Q ss_pred             HHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          162 VGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       162 vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      +|++++++|+.+| . +|+++++++++.+.++++|++++++++.   . +...+++++++.++|+++|++|+....+.++
T Consensus       179 vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~  253 (340)
T cd05284         179 LGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAA  253 (340)
T ss_pred             HHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHH
Confidence            9999999999999 6 8999999999999999999999999886   5 7788888887778999999999866889999


Q ss_pred             HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822          241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI  320 (335)
Q Consensus       241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~  320 (335)
                      ++++++ |+++.+|....  .+++......+++++.++...   ....+..++++++++.+++   ..+.++++++++|+
T Consensus       254 ~~l~~~-g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~  324 (340)
T cd05284         254 KLLAKG-GRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWG---TRAELVEVVALAESGKVKV---EITKFPLEDANEAL  324 (340)
T ss_pred             HHhhcC-CEEEEEcCCCC--CccCHHHhhhcceEEEEEecc---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHH
Confidence            999997 99999987642  344444444688888887543   2457888999999998764   34679999999999


Q ss_pred             HHhcCCCee-eEEEeC
Q 019822          321 QLLKQPDCV-KVLITI  335 (335)
Q Consensus       321 ~~~~~~~~~-k~vi~~  335 (335)
                      +.+.+++.. |+++.+
T Consensus       325 ~~~~~~~~~gkvv~~~  340 (340)
T cd05284         325 DRLREGRVTGRAVLVP  340 (340)
T ss_pred             HHHHcCCccceEEecC
Confidence            999887765 888753

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=2.8e-36  Score=277.70  Aligned_cols=295  Identities=19%  Similarity=0.301  Sum_probs=240.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++++.+++||+|++.+...|+.|.+|.+|.++.|.+...  .++..+|
T Consensus        40 d~~~~~g~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g  115 (339)
T PRK10083         40 DSHIYRGHNPFAKYPRVIG-HEF-FGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVV--LGVHRDG  115 (339)
T ss_pred             chHHHcCCCCcCCCCcccc-cce-EEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCce--EEEccCC
Confidence            5555666665555789999 999 99999999999999999999999999999999999999999976433  2332333


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                                        +|+||+.+++..++++|++++++.++ +...+.+++. +.+..++.++++|+|+|+|++|++
T Consensus       116 ------------------~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~  175 (339)
T PRK10083        116 ------------------GFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLT  175 (339)
T ss_pred             ------------------cceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHH
Confidence                              89999999999999999999998876 4457788885 557788999999999999999999


Q ss_pred             HHHHHHH-cCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          166 AVDGARM-HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       166 ai~la~~-~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      ++|+|+. +|+..++++++++++.+.++++|+++++++++   .++.+.+...  +.++|++||++|++..+..++++++
T Consensus       176 ~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~~~~~--g~~~d~vid~~g~~~~~~~~~~~l~  250 (339)
T PRK10083        176 IVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ---EPLGEALEEK--GIKPTLIIDAACHPSILEEAVTLAS  250 (339)
T ss_pred             HHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHhcC--CCCCCEEEECCCCHHHHHHHHHHhh
Confidence            9999996 69966888999999999999999999998876   5566655432  3356799999997767899999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK  324 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~  324 (335)
                      ++ |+++.+|.... ...+....+..+++++.++..    ....+..++++++++.+++.+++++.|+++++++|++.+.
T Consensus       251 ~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~  324 (339)
T PRK10083        251 PA-ARIVLMGFSSE-PSEIVQQGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFE  324 (339)
T ss_pred             cC-CEEEEEccCCC-CceecHHHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHh
Confidence            98 99999987653 333444445557777776542    2467889999999999887656778999999999999987


Q ss_pred             CCC--eeeEEEeC
Q 019822          325 QPD--CVKVLITI  335 (335)
Q Consensus       325 ~~~--~~k~vi~~  335 (335)
                      +++  ..|+++++
T Consensus       325 ~~~~~~~kvvv~~  337 (339)
T PRK10083        325 KDQRHCCKVLLTF  337 (339)
T ss_pred             cCCCceEEEEEec
Confidence            543  35988863

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=9.8e-36  Score=279.57  Aligned_cols=284  Identities=18%  Similarity=0.192  Sum_probs=238.2

Q ss_pred             ccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeeccc
Q 019822           21 LVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIF  100 (335)
Q Consensus        21 ~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~  100 (335)
                      .++| ||+ +|+|+++|++++.+++||+|++.+...|+.|+.|.++..++|....+  +|+...                
T Consensus        83 ~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~~~----------------  142 (393)
T cd08246          83 HIGG-SDA-SGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI--WGYETN----------------  142 (393)
T ss_pred             cccc-cce-EEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc--ccccCC----------------
Confidence            5889 999 99999999999999999999999999999999999999999986554  344311                


Q ss_pred             ccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHh--cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822          101 SCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE--AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK  177 (335)
Q Consensus       101 ~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~  177 (335)
                       .|+|++|+++++..++++|+++++++++.+++++.|||+++...  +++.++++|||+|+ |++|++++++|+.+|+ +
T Consensus       143 -~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~  220 (393)
T cd08246         143 -YGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-N  220 (393)
T ss_pred             -CCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-e
Confidence             13899999999999999999999999999999999999988654  67899999999997 9999999999999999 8


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCC-------------------chhHHHHHHhhhCCC-CccEEEEcCCChHHHH
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEP-------------------NKSISELVKGITHGM-GVDYCFECTGVPSLLS  237 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~-------------------~~~~~~~i~~~~~g~-g~d~vid~~g~~~~~~  237 (335)
                      ++++++++++.+.++++|+++++++++.+                   ...+...+.++++++ ++|++||++|+. .+.
T Consensus       221 vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~  299 (393)
T cd08246         221 PVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFP  299 (393)
T ss_pred             EEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHH
Confidence            88888899999999999999998864310                   013567788888887 899999999985 788


Q ss_pred             HHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          238 EALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       238 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      .++++++++ |+++.+|.......+++...+..++.++.++...+   .+++..++++++++.+.+  .+++++++++++
T Consensus       300 ~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~  373 (393)
T cd08246         300 TSVFVCDRG-GMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETP  373 (393)
T ss_pred             HHHHHhccC-CEEEEEcccCCCCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHH
Confidence            999999997 99999987543334455566666888888876443   357888999999998764  367899999999


Q ss_pred             HHHHHhcCC-Cee-eEEE
Q 019822          318 KAIQLLKQP-DCV-KVLI  333 (335)
Q Consensus       318 ea~~~~~~~-~~~-k~vi  333 (335)
                      +|++.+.++ +.. |+++
T Consensus       374 ~a~~~~~~~~~~~gkvvv  391 (393)
T cd08246         374 DAHQLMHRNQHHVGNMAV  391 (393)
T ss_pred             HHHHHHHhCccccceEEE
Confidence            999999877 554 7765

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.5e-35  Score=274.11  Aligned_cols=285  Identities=25%  Similarity=0.376  Sum_probs=238.0

Q ss_pred             CccccccccccceEEEEEeCCCCC--cccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCce
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVK--EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQK   95 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~--~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~   95 (335)
                      .+|.++| ||+ +|+|+++|+.++  .|++||+|+..+.++|+.|++|..|.++.|.....  +|+...           
T Consensus        61 ~~p~~~g-~e~-~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~-----------  125 (350)
T cd08256          61 KPPMIPG-HEF-VGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL--YGFQNN-----------  125 (350)
T ss_pred             CCCcccC-cce-eEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc--eeeccC-----------
Confidence            4678899 999 999999999998  89999999999999999999999999999986432  344210           


Q ss_pred             eecccccccceeeEEeccc-ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC
Q 019822           96 LYHIFSCSTWSEYMVIDAN-YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG  174 (335)
Q Consensus        96 ~~~~~~~g~~~~~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G  174 (335)
                           ..|+|++|+.++++ .++++|+++++++++++ .++.|+|+++ +..++.++++|||.|+|.+|++++++|+.+|
T Consensus       126 -----~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G  198 (350)
T cd08256         126 -----VNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKN  198 (350)
T ss_pred             -----CCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                 12489999999988 67899999999999888 7899999987 7889999999999778999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822          175 AAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       175 ~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      +..++++++++++.+.++++|++++++++.   .++...+.++++++++|+++|++|+...+..++++++++ |+++.+|
T Consensus       199 ~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g  274 (350)
T cd08256         199 PKKLIVLDLKDERLALARKFGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFS  274 (350)
T ss_pred             CcEEEEEcCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEc
Confidence            867889999999999999999999998876   678888888888889999999999765788999999997 9999998


Q ss_pred             cCCCccccchhHHH-hhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEE
Q 019822          255 VGVDAMVPLNVIAL-ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVL  332 (335)
Q Consensus       255 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~v  332 (335)
                      .... ..++....+ ..+++++.++....    ..+.+++++++++.+++.+++++.++++++++|++.+.+++.. |++
T Consensus       275 ~~~~-~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv  349 (350)
T cd08256         275 VFGD-PVTVDWSIIGDRKELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVV  349 (350)
T ss_pred             cCCC-CCccChhHhhcccccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEe
Confidence            6542 333443333 24667777765432    4688899999999988755567899999999999999887654 776


Q ss_pred             E
Q 019822          333 I  333 (335)
Q Consensus       333 i  333 (335)
                      +
T Consensus       350 ~  350 (350)
T cd08256         350 L  350 (350)
T ss_pred             C
Confidence            4

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.3e-35  Score=275.05  Aligned_cols=290  Identities=24%  Similarity=0.391  Sum_probs=238.9

Q ss_pred             CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822           17 RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL   96 (335)
Q Consensus        17 ~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~   96 (335)
                      ..+|.++| ||+ +|+|+++|++++.|++||+|++.+..+|+.|+.|..|.++.|.....  .|+..+|           
T Consensus        85 ~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~~~g-----------  149 (384)
T cd08265          85 TEFPVVIG-HEF-SGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE--LGFSADG-----------  149 (384)
T ss_pred             cCCCcccc-cce-EEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce--eeecCCC-----------
Confidence            34678999 999 99999999999999999999999999999999999999999986543  3444444           


Q ss_pred             ecccccccceeeEEecccceEEcCCCC-------CcccccccccchhhhhHHHHHh-cCCCCCCEEEEEcCCHHHHHHHH
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSI-------DPSDASFLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGTVGLGAVD  168 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~-------~~~~aa~l~~~~~ta~~~l~~~-~~~~~~~~VlI~G~g~vG~~ai~  168 (335)
                             +|++|+.++++.++++|+++       +++ ++++..++++||++++.. .++.++++|||+|+|++|+++++
T Consensus       150 -------~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~  221 (384)
T cd08265         150 -------AFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIA  221 (384)
T ss_pred             -------cceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHH
Confidence                   89999999999999999863       444 555666889999998766 68999999999988999999999


Q ss_pred             HHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccCC
Q 019822          169 GARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGK  247 (335)
Q Consensus       169 la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~  247 (335)
                      +|+.+|+.+|+++++++++.+.++++|+++++++++....++...++++++++++|+|+|++|.+ ..+..++++++++ 
T Consensus       222 lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-  300 (384)
T cd08265         222 LAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-  300 (384)
T ss_pred             HHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-
Confidence            99999987799999899999999999999999887511136888888888888999999999863 4678999999997 


Q ss_pred             eEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCC
Q 019822          248 GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD  327 (335)
Q Consensus       248 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~  327 (335)
                      |+++.+|.... ..+++...+..+..++.++....  ....+.+++++++++.+++.+++++.|+++++++|++.+.++.
T Consensus       301 G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~  377 (384)
T cd08265         301 GKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERT  377 (384)
T ss_pred             CEEEEECCCCC-CCcccHHHHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCC
Confidence            99999986543 33444455555677777765322  2346889999999999877666778999999999999977665


Q ss_pred             eeeEEE
Q 019822          328 CVKVLI  333 (335)
Q Consensus       328 ~~k~vi  333 (335)
                      ..|+++
T Consensus       378 ~~kvvv  383 (384)
T cd08265         378 DGKITI  383 (384)
T ss_pred             CceEEe
Confidence            557765

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=3e-35  Score=277.41  Aligned_cols=278  Identities=19%  Similarity=0.226  Sum_probs=223.1

Q ss_pred             CccccccccccceEEEEEeCCCCC-cccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVK-EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL   96 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~   96 (335)
                      .+|.++| ||+ +|+|+++|++|+ .|++||+|++.+...|+.|..|. +            +|+..+|           
T Consensus        61 ~~p~i~G-hE~-~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~-~------------~g~~~~G-----------  114 (410)
T cd08238          61 KEPVILG-HEF-AGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCP-G------------YSYTYPG-----------  114 (410)
T ss_pred             CCCceec-ccc-EEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCC-C------------ccccCCC-----------
Confidence            3688999 999 999999999998 59999999999888899888772 1            1222233           


Q ss_pred             ecccccccceeeEEeccc----ceEEcCCCCCcccccccccch---hhhhHHH--------HHhcCCCCCCEEEEEcC-C
Q 019822           97 YHIFSCSTWSEYMVIDAN----YVVKVDPSIDPSDASFLSCGF---TTGYGAA--------WKEAKVEKGSSVAVLGL-G  160 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~----~~~~lp~~~~~~~aa~l~~~~---~ta~~~l--------~~~~~~~~~~~VlI~G~-g  160 (335)
                             +|+||+.++++    .++++|+++++++++++. ++   .+++.++        .++++++++++|+|+|+ |
T Consensus       115 -------~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G  186 (410)
T cd08238         115 -------GLATYHIIPNEVMEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAG  186 (410)
T ss_pred             -------cceEEEEecHHhccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCC
Confidence                   89999999987    689999999999888652 21   1233332        24577899999999985 9


Q ss_pred             HHHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHhc--------CCc-eEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          161 TVGLGAVDGARMHG--AAKIIGIDKNPWKKEKGKAF--------GMT-DFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       161 ~vG~~ai~la~~~G--~~~V~~~~~~~~~~~~~~~l--------ga~-~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      ++|++++|+|+.+|  +.+|+++++++++++.++++        |++ .++++++  ..++.+.++++++++++|++||+
T Consensus       187 ~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~  264 (410)
T cd08238         187 PMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVF  264 (410)
T ss_pred             HHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEc
Confidence            99999999999975  45799999999999999987        766 5677653  13577888888888899999999


Q ss_pred             CCChHHHHHHHHhhccCCeEEEEEccCC-C-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCce
Q 019822          230 TGVPSLLSEALETTKVGKGKVIVIGVGV-D-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLL  307 (335)
Q Consensus       230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  307 (335)
                      +|.+..++.++++++++ |+++.++... . ...+++...++.+++++.|+..++   ..++.++++++.+|++++.+++
T Consensus       265 ~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~i  340 (410)
T cd08238         265 VPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMV  340 (410)
T ss_pred             CCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcE
Confidence            99877889999999997 8887764322 1 235677777888999999976433   4678999999999999998899


Q ss_pred             eEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          308 THHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       308 ~~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      +++|||+++++|++.+..+...|+++.+
T Consensus       341 t~~~~l~~~~~A~~~~~~~~~gKvvl~~  368 (410)
T cd08238         341 THIGGLNAAAETTLNLPGIPGGKKLIYT  368 (410)
T ss_pred             EEEecHHHHHHHHHHhhccCCceEEEEC
Confidence            9999999999999999843345988863

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.1e-35  Score=270.01  Aligned_cols=298  Identities=22%  Similarity=0.360  Sum_probs=249.3

Q ss_pred             EeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCC
Q 019822            7 LISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST   86 (335)
Q Consensus         7 ~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~   86 (335)
                      +..+.|.++...+|.++| ||+ +|+|+++|+++..|++||+|+..+...|+.|.+|+.|..+.|.++..  .++..+| 
T Consensus        42 ~~~~~g~~~~~~~~~~~g-~e~-~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g-  116 (345)
T cd08260          42 WHGWQGHDPDVTLPHVPG-HEF-AGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQ--PGFTHPG-  116 (345)
T ss_pred             HHHhcCCCCCCCCCeeec-cce-eEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcc--cccCCCC-
Confidence            334455555445688999 999 99999999999999999999988888999999999999999997643  2333333 


Q ss_pred             ccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           87 SRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        87 ~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                                       +|++|+.+++.  +++++|+++++++++.++..+.|||+++.+..++.++++|+|+|+|.+|+
T Consensus       117 -----------------~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~  179 (345)
T cd08260         117 -----------------SFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGL  179 (345)
T ss_pred             -----------------cceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHH
Confidence                             89999999985  99999999999999999989999999987788899999999999999999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++++|+..|+ +|+++.+++++.+.++++|+++++++++  ..++...+.++..+ ++|++||++|+...+...+++++
T Consensus       180 ~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~  255 (345)
T cd08260         180 SAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE--VEDVAAAVRDLTGG-GAHVSVDALGIPETCRNSVASLR  255 (345)
T ss_pred             HHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc--chhHHHHHHHHhCC-CCCEEEEcCCCHHHHHHHHHHhh
Confidence            99999999999 9999999999999999999999988763  13567778777777 89999999997657889999999


Q ss_pred             cCCeEEEEEccCCC-cc-ccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          245 VGKGKVIVIGVGVD-AM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       245 ~~~G~~v~~g~~~~-~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      ++ |+++.+|.... .. ..+++..+..+++++.+....   ....+..++++++++++.+.+++++.++++++++|++.
T Consensus       256 ~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~  331 (345)
T cd08260         256 KR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM---PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAA  331 (345)
T ss_pred             cC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC---CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHH
Confidence            97 99999987654 21 455555665688888886532   24678889999999998776556789999999999999


Q ss_pred             hcCCCee-eEEEe
Q 019822          323 LKQPDCV-KVLIT  334 (335)
Q Consensus       323 ~~~~~~~-k~vi~  334 (335)
                      +.+++.. |+|++
T Consensus       332 ~~~~~~~~~~v~~  344 (345)
T cd08260         332 MDDYATAGITVIT  344 (345)
T ss_pred             HHcCCCCceEEec
Confidence            9887665 87764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.7e-35  Score=273.25  Aligned_cols=318  Identities=28%  Similarity=0.430  Sum_probs=253.4

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCc---ccCCCEEEecccCCCCCCcccccCCCCCCcCccccc--cc
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKE---VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL--NG   80 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~---~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~--~g   80 (335)
                      |++.+.|.++. .+|.++| ||+ +|+|+.+|+++..   |++||+|+..+...|+.|.+|..+.+++|....++.  .|
T Consensus        41 d~~~~~~~~~~-~~p~~~g-~e~-~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (367)
T cd08263          41 DLHVLKGELPF-PPPFVLG-HEI-SGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKG  117 (367)
T ss_pred             hHHHhcCCCCC-CCCcccc-ccc-ceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccc
Confidence            44455565554 5678999 999 9999999999988   999999999999999999999999999999765321  01


Q ss_pred             cccCCCccccccCceeecc--cccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc
Q 019822           81 LMLDSTSRMSVRGQKLYHI--FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG  158 (335)
Q Consensus        81 ~~~~g~~~~~~~~~~~~~~--~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G  158 (335)
                      ...+|...+...  ..+++  ...|++++|+.++++.++++|+++++.++++++..+.|||+++.+...+.++++|||+|
T Consensus       118 ~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g  195 (367)
T cd08263         118 TLYDGTTRLFRL--DGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG  195 (367)
T ss_pred             cccCCccccccc--CCCccccccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC
Confidence            111110000000  00000  01248999999999999999999999999999999999999988878889999999998


Q ss_pred             CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHH
Q 019822          159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSE  238 (335)
Q Consensus       159 ~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~  238 (335)
                      +|.+|++++++|+..|+.+|+++++++++.+.++++|++.+++++.   .++...+++.++++++|+++|++++...+..
T Consensus       196 ~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~  272 (367)
T cd08263         196 VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKL  272 (367)
T ss_pred             CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHH
Confidence            8999999999999999944999998999999999999999999887   6788888888777799999999998656789


Q ss_pred             HHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          239 ALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       239 ~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      ++++++++ |+++.++.... ....++...++.+++++.++....  ..+.+..++++++++.+++.+.+++.++++++.
T Consensus       273 ~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~  349 (367)
T cd08263         273 ALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGAR--PRQDLPELVGLAASGKLDPEALVTHKYKLEEIN  349 (367)
T ss_pred             HHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCCC--cHHHHHHHHHHHHcCCCCcccceeEEecHHHHH
Confidence            99999998 99999986543 234556566656888887753221  235688899999999988766677899999999


Q ss_pred             HHHHHhcCCCee-eEEEe
Q 019822          318 KAIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       318 ea~~~~~~~~~~-k~vi~  334 (335)
                      ++++.+++++.. |+|++
T Consensus       350 ~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         350 EAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             HHHHHHhcCCccceeeeC
Confidence            999999888754 88763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=6.8e-35  Score=269.15  Aligned_cols=299  Identities=28%  Similarity=0.385  Sum_probs=246.1

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      .|++.+.|.++. ..|.++| ||+ +|+|+++|+++..+++||+|+..+...|+.|..|..|+.+.|....+  ++...+
T Consensus        40 ~d~~~~~g~~~~-~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  114 (345)
T cd08287          40 SDLWPYRGVSPT-RAPAPIG-HEF-VGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGF--WGAFVD  114 (345)
T ss_pred             cchhhhcCCCCC-CCCcccc-cce-EEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCc--ccCCCC
Confidence            355566666653 3578999 999 99999999999999999999987778899999999999999987554  343344


Q ss_pred             CCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCccccc-----ccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDAS-----FLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa-----~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                      |                  +|++|+.++.+  .++++|++++++.+.     ++...+.+|++++ ..+.+.++++|+|.
T Consensus       115 g------------------~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~  175 (345)
T cd08287         115 G------------------GQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVV  175 (345)
T ss_pred             C------------------ceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEE
Confidence            4                  89999999975  999999999882221     1225678899887 46788999999998


Q ss_pred             cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHH
Q 019822          158 GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS  237 (335)
Q Consensus       158 G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~  237 (335)
                      |+|.+|++++++|+++|++.++++++++++.+.++++|++.+++++.   ..+.+.+.++++++++|+++|++|++..+.
T Consensus       176 g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~  252 (345)
T cd08287         176 GDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG---EEAVARVRELTGGVGADAVLECVGTQESME  252 (345)
T ss_pred             CCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHH
Confidence            88999999999999999966999998888999999999999999887   678888888888789999999998876889


Q ss_pred             HHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          238 EALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       238 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      .++++++++ |+++.++.... ...++....+.+++++.+....   ..+.+..+++++.++++++.+++++.+++++++
T Consensus       253 ~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~  327 (345)
T cd08287         253 QAIAIARPG-GRVGYVGVPHG-GVELDVRELFFRNVGLAGGPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVA  327 (345)
T ss_pred             HHHHhhccC-CEEEEecccCC-CCccCHHHHHhcceEEEEecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHH
Confidence            999999997 99999987653 3445553445689988875422   245788899999999988766567899999999


Q ss_pred             HHHHHhcCCCeeeEEEeC
Q 019822          318 KAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       318 ea~~~~~~~~~~k~vi~~  335 (335)
                      +|++.+.+++..|++|+.
T Consensus       328 ~a~~~~~~~~~~k~~~~~  345 (345)
T cd08287         328 EGYRAMDERRAIKVLLRP  345 (345)
T ss_pred             HHHHHHhCCCceEEEeCC
Confidence            999998887777999863

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=5.9e-35  Score=269.43  Aligned_cols=301  Identities=27%  Similarity=0.364  Sum_probs=245.0

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++...|.++ ..+|.++| ||+ +|+|+++|++++.+++||+|+..+...|+.|.+|..+.++.|.+...  +|..  +
T Consensus        41 d~~~~~g~~~-~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~  113 (344)
T cd08284          41 DLHIYRGHIP-STPGFVLG-HEF-VGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGL--FGYA--G  113 (344)
T ss_pred             chhhhcCCCC-CCCCcccc-cce-EEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCcc--cccc--c
Confidence            4455555554 23477899 999 99999999999999999999999889999999999999999986532  1110  0


Q ss_pred             CccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                                  .....|++++|+.++++  .++++|++++++++++++++++|||+++. ...+.++++|||+|+|.+|
T Consensus       114 ------------~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg  180 (344)
T cd08284         114 ------------SPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVG  180 (344)
T ss_pred             ------------cCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHH
Confidence                        00012489999999875  99999999999999999999999999885 4788999999999889999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++++|+.+|+.+|+++++++++.+.++++|+. +++.+.   .++...+.++++++++|++||++++...+...++++
T Consensus       181 ~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l  256 (344)
T cd08284         181 LCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLV  256 (344)
T ss_pred             HHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhc
Confidence            9999999999975799998889999999999975 466665   567788888888779999999999866889999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      +++ |+++.+|..............+.+++++.+..   ....+.+..+++++.++.+++.+++++.+++++++++++.+
T Consensus       257 ~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~  332 (344)
T cd08284         257 RPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLF  332 (344)
T ss_pred             ccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEec---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHH
Confidence            997 99999997654333444445556888877542   12356789999999999987766677889999999999988


Q ss_pred             cCCCeeeEEEe
Q 019822          324 KQPDCVKVLIT  334 (335)
Q Consensus       324 ~~~~~~k~vi~  334 (335)
                      .+++..|+|++
T Consensus       333 ~~~~~~k~Vi~  343 (344)
T cd08284         333 DKRKVLKVVLD  343 (344)
T ss_pred             hcCCceEEEec
Confidence            87655788875

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=5.6e-35  Score=270.31  Aligned_cols=285  Identities=25%  Similarity=0.352  Sum_probs=241.3

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+++|+++..+++||+|+..+...|+.|+.|.++.++.|.+..+.  |....|            
T Consensus        65 ~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------------  128 (350)
T cd08240          65 KLPLVLG-HEI-VGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL--GIFQDG------------  128 (350)
T ss_pred             CCCcccc-cce-eEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce--eeeccC------------
Confidence            3567899 999 999999999999999999999999999999999999999999876542  333333            


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK  177 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~  177 (335)
                            ++++|+.++.+.++++|+++++.+++++.+.+.|||+++.+...+.++++|||+|+|++|++++|+|+.+|+++
T Consensus       129 ------~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~  202 (350)
T cd08240         129 ------GYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPAN  202 (350)
T ss_pred             ------cceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCe
Confidence                  89999999999999999999999999999999999999876666678999999988999999999999999978


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      |+++++++++.+.++++|++.+++.++   ..+...+.+..++ ++|++||++|....+..++++++++ |+++.+|...
T Consensus       203 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~  277 (350)
T cd08240         203 IIVVDIDEAKLEAAKAAGADVVVNGSD---PDAAKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFG  277 (350)
T ss_pred             EEEEeCCHHHHHHHHHhCCcEEecCCC---ccHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCC
Confidence            999999999999999999988888876   6677778877777 8999999999766889999999998 9999998765


Q ss_pred             CccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEEEeC
Q 019822          258 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      . ...++.....+++.++.+.....   .+++..++++++++.+++.  ..+.++++++++|++.+.+++.. |+++++
T Consensus       278 ~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         278 G-EATLPLPLLPLRALTIQGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             C-CCcccHHHHhhcCcEEEEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence            4 22333334455888888765433   3678889999999987653  45689999999999999887754 888753

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-34  Score=266.33  Aligned_cols=296  Identities=26%  Similarity=0.455  Sum_probs=245.8

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++...|.++...+|.++| +|+ +|+|+++|++++.|++||+|+..+..+|+.|..|+.+.+|.|.+...  +++... 
T Consensus        40 d~~~~~~~~~~~~~~~~~g-~e~-~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-  114 (337)
T cd08261          40 DLHIYHGRNPFASYPRILG-HEL-SGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQV--LGVHRD-  114 (337)
T ss_pred             ChHHHcCCCCcCCCCcccc-ccc-EEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCe--eeecCC-
Confidence            4455556655545678999 999 99999999999999999999998888999999999999999975433  233223 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                                       |+|++|+.++++ ++++|+++++++++++ ..+.++++++ +..++.++++|||+|+|.+|.+
T Consensus       115 -----------------g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~  174 (337)
T cd08261         115 -----------------GGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLG  174 (337)
T ss_pred             -----------------CcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence                             389999999999 9999999999998877 4778888876 7788999999999988999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++++|+.+|+ +|+++.+++++.++++++|+++++++++   .++...++++++++++|+++|++++...+..+++++++
T Consensus       175 a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~  250 (337)
T cd08261         175 VIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD---EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAH  250 (337)
T ss_pred             HHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhc
Confidence            9999999999 8999988999999999999999999887   67888888888877899999999886688999999999


Q ss_pred             CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822          246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ  325 (335)
Q Consensus       246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~  325 (335)
                      + |+++.++.... ...++...+..+++.+.+..   ....+.+..++++++++.+++.+.+...+++++++++++.+.+
T Consensus       251 ~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~  325 (337)
T cd08261         251 G-GRVVLVGLSKG-PVTFPDPEFHKKELTILGSR---NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEA  325 (337)
T ss_pred             C-CEEEEEcCCCC-CCccCHHHHHhCCCEEEEec---cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhc
Confidence            7 99999986542 33444445555777777653   2234578889999999998764346678999999999999988


Q ss_pred             CC-e-eeEEEeC
Q 019822          326 PD-C-VKVLITI  335 (335)
Q Consensus       326 ~~-~-~k~vi~~  335 (335)
                      ++ . .|+|+++
T Consensus       326 ~~~~~~k~v~~~  337 (337)
T cd08261         326 PPGGVIKVLIEF  337 (337)
T ss_pred             CCCceEEEEEeC
Confidence            73 4 4998875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.1e-34  Score=267.52  Aligned_cols=285  Identities=26%  Similarity=0.400  Sum_probs=237.7

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+++|++++.|++||+|++.+..+|+.|++|+.|.+++|.+-.+.. .....             
T Consensus        53 ~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------  116 (343)
T cd05285          53 KEPMVLG-HES-AGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAA-TPPVD-------------  116 (343)
T ss_pred             CCCcccC-cce-eEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccc-cccCC-------------
Confidence            3577899 999 9999999999999999999999999999999999999999998642210 01122             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK  177 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~  177 (335)
                           |+|++|+.++++.++++|+++++++++.+ .++.+|++++ +.+.+.++++|||.|+|++|.+++++|+.+|++.
T Consensus       117 -----g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~  189 (343)
T cd05285         117 -----GTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATK  189 (343)
T ss_pred             -----CceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence                 38999999999999999999999998877 4788999886 8899999999999988999999999999999944


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCCchh---HHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS---ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~---~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      |+++++++++.+.++++|++.++++++   .+   +.+.+.+.++++++|+++||+|+...+...+++++++ |+++.+|
T Consensus       190 v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g  265 (343)
T cd05285         190 VVVTDIDPSRLEFAKELGATHTVNVRT---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVG  265 (343)
T ss_pred             EEEECCCHHHHHHHHHcCCcEEecccc---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEc
Confidence            999998999999999999999998876   44   3777888888778999999999865789999999997 9999998


Q ss_pred             cCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCC--eeeEE
Q 019822          255 VGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKVL  332 (335)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~--~~k~v  332 (335)
                      .... ...+++..+..+++.+.+....    .+.+..+++++.++.+.+.+++++.++++++.+|++.+.+++  .+|++
T Consensus       266 ~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~  340 (343)
T cd05285         266 MGKP-EVTLPLSAASLREIDIRGVFRY----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVV  340 (343)
T ss_pred             cCCC-CCccCHHHHhhCCcEEEEeccC----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEE
Confidence            6543 2344444566677887765422    256888999999998765555778899999999999998874  36998


Q ss_pred             Ee
Q 019822          333 IT  334 (335)
Q Consensus       333 i~  334 (335)
                      |.
T Consensus       341 ~~  342 (343)
T cd05285         341 IE  342 (343)
T ss_pred             Ee
Confidence            74

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=1.2e-34  Score=267.38  Aligned_cols=298  Identities=24%  Similarity=0.379  Sum_probs=246.4

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |+..+.|.++...+|.++| +|+ +|+|+++|++++.|++||+|+..+...|+.|++|..|+++.|....+  .|.... 
T Consensus        40 d~~~~~g~~~~~~~~~~~g-~~~-~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-  114 (343)
T cd08235          40 DVKKIRGGHTDLKPPRILG-HEI-AGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKK--FGNLYD-  114 (343)
T ss_pred             cHHHHcCCCccCCCCcccc-cce-EEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcce--eccCCC-
Confidence            4444455553334577999 999 99999999999999999999999999999999999999999987544  233333 


Q ss_pred             CccccccCceeecccccccceeeEEecccc-----eEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCC
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANY-----VVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLG  160 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-----~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g  160 (335)
                                       |+|++|+.++++.     ++++|+++++.+++++ ..+.+||+++. ..++.++++|||+|+|
T Consensus       115 -----------------g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g  175 (343)
T cd08235         115 -----------------GGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAG  175 (343)
T ss_pred             -----------------CcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCC
Confidence                             3899999999998     9999999999998876 68899999884 4589999999999889


Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      .+|.+++++|+..|++.|+++++++++.+.++++|+++++++++   .++...+++.++++++|+++||+++...+...+
T Consensus       176 ~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~  252 (343)
T cd08235         176 PIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQAL  252 (343)
T ss_pred             HHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHH
Confidence            99999999999999933999999999999999999999999887   778888888888878999999999776788999


Q ss_pred             HhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHH
Q 019822          241 ETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA  319 (335)
Q Consensus       241 ~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea  319 (335)
                      ++++++ |+++.++.... ....+++..+.++++.+.+....   ..+.+..++++++++.+.+.+.+...+++++++++
T Consensus       253 ~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a  328 (343)
T cd08235         253 ELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEA  328 (343)
T ss_pred             HHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHH
Confidence            999997 99999986543 23445555666688888765432   24678889999999998765556678999999999


Q ss_pred             HHHhcCCCeeeEEEe
Q 019822          320 IQLLKQPDCVKVLIT  334 (335)
Q Consensus       320 ~~~~~~~~~~k~vi~  334 (335)
                      ++.+.+++..|+|+.
T Consensus       329 ~~~~~~~~~~k~vi~  343 (343)
T cd08235         329 FELAADGKSLKIVIT  343 (343)
T ss_pred             HHHHhCCCcEEEEeC
Confidence            999988773388863

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.8e-35  Score=268.79  Aligned_cols=264  Identities=19%  Similarity=0.253  Sum_probs=207.4

Q ss_pred             EEEeEeecCCCC---CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccc
Q 019822            5 VTLISFALKDSQ---RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL   81 (335)
Q Consensus         5 ~d~~~~~g~~~~---~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~   81 (335)
                      .|++.++|.++.   ..+|.++| ||+ +|+|+++|+++ .|++||+|++.    |..|.+|..              | 
T Consensus        41 ~D~~~~~G~~~~~~~~~~P~i~G-hE~-~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~~--------------~-   98 (308)
T TIGR01202        41 TEKLFWNGLMPPFPGMGYPLVPG-YES-VGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDVR--------------G-   98 (308)
T ss_pred             chhHHhcCCCCCCCCCCCCccCc-cee-EEEEEEecCCC-CCCCCCEEEEe----Ccccccccc--------------c-
Confidence            466777887754   25799999 999 99999999998 69999999873    223333210              0 


Q ss_pred             ccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCH
Q 019822           82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT  161 (335)
Q Consensus        82 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~  161 (335)
                       ..                  |+|+||+.+|++.++++|++++++. +++. ...|||+++.+ . ..+++++||+|+|+
T Consensus        99 -~~------------------G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~  155 (308)
T TIGR01202        99 -LF------------------GGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGT  155 (308)
T ss_pred             -cC------------------CcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCH
Confidence             11                  3899999999999999999999864 4444 57899998744 3 34688999999999


Q ss_pred             HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822          162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE  241 (335)
Q Consensus       162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~  241 (335)
                      +|++++|+|+++|++.|++++.++++++.++++   .++++.+   .          .+.++|+||||+|+...++.+++
T Consensus       156 vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~----------~~~g~Dvvid~~G~~~~~~~~~~  219 (308)
T TIGR01202       156 LGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D----------PRRDYRAIYDASGDPSLIDTLVR  219 (308)
T ss_pred             HHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c----------cCCCCCEEEECCCCHHHHHHHHH
Confidence            999999999999996677788877777766543   4455432   1          23479999999999767899999


Q ss_pred             hhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       242 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      +++++ |+++.+|.... ..+++...++.+++++.++...   ..++++.++++++++++++.++++++|||+|+++|++
T Consensus       220 ~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~  294 (308)
T TIGR01202       220 RLAKG-GEIVLAGFYTE-PVNFDFVPAFMKEARLRIAAEW---QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYM  294 (308)
T ss_pred             hhhcC-cEEEEEeecCC-CcccccchhhhcceEEEEeccc---chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHH
Confidence            99998 99999997653 4556666677788888876532   2467999999999999999888999999999999999


Q ss_pred             HhcCCC-eeeEEEe
Q 019822          322 LLKQPD-CVKVLIT  334 (335)
Q Consensus       322 ~~~~~~-~~k~vi~  334 (335)
                      .+.+++ ..|++++
T Consensus       295 ~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       295 TAFSDPDCLKMILD  308 (308)
T ss_pred             HHhcCcCceEEEeC
Confidence            876654 4698874

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=2.2e-34  Score=270.75  Aligned_cols=283  Identities=19%  Similarity=0.205  Sum_probs=235.9

Q ss_pred             cccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cCCCccccccCceeeccc
Q 019822           22 VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLYHIF  100 (335)
Q Consensus        22 v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~  100 (335)
                      ++| ||+ +|+|+++|++++.|++||+|++.....|+.|+.|+.|.++.|.....  +|.. .+                
T Consensus        80 v~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~----------------  139 (398)
T TIGR01751        80 IIG-SDA-SGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI--WGYETNF----------------  139 (398)
T ss_pred             ecc-cce-EEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc--ccccCCC----------------
Confidence            899 999 99999999999999999999999999999999999999999976433  2321 22                


Q ss_pred             ccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHH--hcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822          101 SCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK--EAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK  177 (335)
Q Consensus       101 ~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~  177 (335)
                        |+|++|+.++++.++++|+++++++++.+.+.+.|||+++..  ..++.++++|||+|+ |.+|++++++|+++|+ +
T Consensus       140 --g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~  216 (398)
T TIGR01751       140 --GSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-N  216 (398)
T ss_pred             --ccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-e
Confidence              389999999999999999999999999999999999998755  467889999999997 9999999999999999 8


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCC-------------------chhHHHHHHhhhCCCCccEEEEcCCChHHHHH
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEP-------------------NKSISELVKGITHGMGVDYCFECTGVPSLLSE  238 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~-------------------~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~  238 (335)
                      ++++++++++.+.++++|++.++++++.+                   ...+.+.+.++++++++|++|||+|.. .+..
T Consensus       217 vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~  295 (398)
T TIGR01751       217 PVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPT  295 (398)
T ss_pred             EEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHH
Confidence            88888899999999999999999875410                   012556677778777999999999975 7889


Q ss_pred             HHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822          239 ALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK  318 (335)
Q Consensus       239 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e  318 (335)
                      ++++++++ |+++.+|.......+++...+..++.++.++.++.   ..++..++++++++++...  ++++++++++++
T Consensus       296 ~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~  369 (398)
T TIGR01751       296 SVFVCRRG-GMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDPT--LSKVYPLEEIGQ  369 (398)
T ss_pred             HHHhhccC-CEEEEEccccCCCCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCcccc--eeeEEcHHHHHH
Confidence            99999997 99999987654334455555556777777765443   3457889999999987643  678999999999


Q ss_pred             HHHHhcCCCee-eEEEe
Q 019822          319 AIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       319 a~~~~~~~~~~-k~vi~  334 (335)
                      +|+.+.+++.. |+++.
T Consensus       370 a~~~~~~~~~~gkvvv~  386 (398)
T TIGR01751       370 AHQDVHRNHHQGNVAVL  386 (398)
T ss_pred             HHHHHHcCCCCceEEEE
Confidence            99999877754 88775

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=4.2e-34  Score=262.81  Aligned_cols=294  Identities=27%  Similarity=0.417  Sum_probs=246.3

Q ss_pred             EeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            7 LISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         7 ~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      ++...|.++. ..+|.++| ||+ +|+|+++|++++.+++||+|+..+..+|+.|+.|+.+..++|.....  .|...+|
T Consensus        43 ~~~~~g~~~~~~~~~~~~g-~~~-~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g  118 (338)
T cd08254          43 LHILDGGVPTLTKLPLTLG-HEI-AGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGM--PGLGIDG  118 (338)
T ss_pred             HHHHcCCCcccCCCCEecc-ccc-cEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCc--cccccCC
Confidence            3344555542 34578999 999 99999999999999999999999999999999999999999976544  2444444


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                                        ++++|+.++.+.++++|+++++.+++.++.++.|||+++.....+.++++|||.|+|.+|++
T Consensus       119 ------------------~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~  180 (338)
T cd08254         119 ------------------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLN  180 (338)
T ss_pred             ------------------cceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHH
Confidence                              89999999999999999999999999999999999999888788999999999888999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++++|+..|+ +|+++++++++.+.++++|++++++.++   ..+...+ +.+.++++|+++||++....+..+++++++
T Consensus       181 ~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~  255 (338)
T cd08254         181 AVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKP  255 (338)
T ss_pred             HHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhc
Confidence            9999999999 8999999999999999999988888776   5555556 556666899999999877788999999999


Q ss_pred             CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822          246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ  325 (335)
Q Consensus       246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~  325 (335)
                      + |+++.++.... ...++...+..++.++.++...   ....+..++++++++.+++.   .+.+++++++++++.+.+
T Consensus       256 ~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~  327 (338)
T cd08254         256 G-GRIVVVGLGRD-KLTVDLSDLIARELRIIGSFGG---TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHK  327 (338)
T ss_pred             C-CEEEEECCCCC-CCccCHHHHhhCccEEEEeccC---CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHc
Confidence            8 99999987543 3445556667788888875422   24678889999999998764   468999999999999988


Q ss_pred             CCee-eEEEeC
Q 019822          326 PDCV-KVLITI  335 (335)
Q Consensus       326 ~~~~-k~vi~~  335 (335)
                      ++.. |+++++
T Consensus       328 ~~~~~kvv~~~  338 (338)
T cd08254         328 GKVKGRVVLVP  338 (338)
T ss_pred             CCccceEEEeC
Confidence            7765 888764

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=8.8e-34  Score=263.69  Aligned_cols=286  Identities=23%  Similarity=0.389  Sum_probs=231.2

Q ss_pred             ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cCCCccccccCceee
Q 019822           19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKLY   97 (335)
Q Consensus        19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~~   97 (335)
                      +|.++| ||+ +|+|+++|+++..|++||+|++.+..+|+.|+.|+.|..+.|.+..+.  +.. .+             
T Consensus        73 ~p~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~--~~~~~~-------------  135 (364)
T PLN02702         73 EPMVIG-HEC-AGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF--ATPPVH-------------  135 (364)
T ss_pred             CCcccc-cce-eEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCcccc--CCCCCC-------------
Confidence            577899 999 999999999999999999999999999999999999999999864321  211 12             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK  177 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~  177 (335)
                           |+|++|+.++++.++++|++++++++++. .++.++++++ ...++.++++|||+|+|++|.+++++|+.+|+..
T Consensus       136 -----g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~  208 (364)
T PLN02702        136 -----GSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPR  208 (364)
T ss_pred             -----CcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence                 38999999999999999999999988753 2455678776 7788999999999998999999999999999966


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhh--hCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI--THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~--~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      |+++++++++.+.++++|++.+++++. ...++.+.+.++  ..+.++|++||++|+...+..++++++++ |+++.+|.
T Consensus       209 v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~  286 (364)
T PLN02702        209 IVIVDVDDERLSVAKQLGADEIVLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGM  286 (364)
T ss_pred             EEEECCCHHHHHHHHHhCCCEEEecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcc
Confidence            888998999999999999988765431 014465665544  23448999999999766889999999997 99999997


Q ss_pred             CCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeec--hhHHHHHHHhcCCCe-eeEE
Q 019822          256 GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL--EEIDKAIQLLKQPDC-VKVL  332 (335)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l--~~~~ea~~~~~~~~~-~k~v  332 (335)
                      ... ...+....+..+++++.++...    ...+..++++++++.+++.+++++.|++  +++++|++.+.+++. .|++
T Consensus       287 ~~~-~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv  361 (364)
T PLN02702        287 GHN-EMTVPLTPAAAREVDVVGVFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVM  361 (364)
T ss_pred             CCC-CCcccHHHHHhCccEEEEeccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEE
Confidence            543 3344555667788988886532    3567889999999998766667788665  799999999887765 4988


Q ss_pred             EeC
Q 019822          333 ITI  335 (335)
Q Consensus       333 i~~  335 (335)
                      +.+
T Consensus       362 ~~~  364 (364)
T PLN02702        362 FNL  364 (364)
T ss_pred             EeC
Confidence            853

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=7.7e-34  Score=265.02  Aligned_cols=303  Identities=25%  Similarity=0.318  Sum_probs=241.1

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc----ccc
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL----NGL   81 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~----~g~   81 (335)
                      |++.+.|.++ ..+|.++| ||+ +|+|+++|+++..+++||+|+..+..+|+.|+.|++|+.++|.+.....    +|+
T Consensus        41 D~~~~~g~~~-~~~p~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~  117 (375)
T cd08282          41 DLHMYRGRTG-AEPGLVLG-HEA-MGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGY  117 (375)
T ss_pred             HHHHHcCCCC-CCCCceec-ccc-EEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccc
Confidence            4555566655 34688999 999 9999999999999999999999999999999999999999997632110    011


Q ss_pred             ccCCCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcc---cccccccchhhhhHHHHHhcCCCCCCEEEE
Q 019822           82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPS---DASFLSCGFTTGYGAAWKEAKVEKGSSVAV  156 (335)
Q Consensus        82 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~---~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI  156 (335)
                      ...            ...  .|+|++|+.++.+  .++++|++++++   .++.+.+.+.|||+++ ..+.+.++++|||
T Consensus       118 ~~~------------~~~--~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI  182 (375)
T cd08282         118 VDM------------GPY--GGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAV  182 (375)
T ss_pred             ccc------------CCC--CCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEE
Confidence            000            000  1489999999976  999999999998   5677888899999988 7888999999999


Q ss_pred             EcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH--
Q 019822          157 LGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS--  234 (335)
Q Consensus       157 ~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~--  234 (335)
                      .|+|.+|++++|+|+++|+.+|+++++++++.+.++++|+ ..+++++   .++.+.++++++ +++|+++||+|+..  
T Consensus       183 ~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~~~~---~~~~~~i~~~~~-~~~d~v~d~~g~~~~~  257 (375)
T cd08282         183 FGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPIDFSD---GDPVEQILGLEP-GGVDRAVDCVGYEARD  257 (375)
T ss_pred             ECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eEeccCc---ccHHHHHHHhhC-CCCCEEEECCCCcccc
Confidence            8889999999999999997679999999999999999998 4567765   667788888777 58999999998762  


Q ss_pred             ---------HHHHHHHhhccCCeEEEEEccCCCc------------cccchhHHHhhcCcEEEEeeccCCCCcCcHHHHH
Q 019822          235 ---------LLSEALETTKVGKGKVIVIGVGVDA------------MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLL  293 (335)
Q Consensus       235 ---------~~~~~~~~l~~~~G~~v~~g~~~~~------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  293 (335)
                               .+..++++++++ |+++.+|.....            ...++...+..++..+.+...   .....+..++
T Consensus       258 ~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  333 (375)
T cd08282         258 RGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLR  333 (375)
T ss_pred             cccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecC---CchhhHHHHH
Confidence                     478999999997 999988764321            133455555556776665432   1245688899


Q ss_pred             HHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          294 DKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       294 ~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      +++.++++++..++++.++++++++|++.+.+++..|+++++
T Consensus       334 ~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~  375 (375)
T cd08282         334 DLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP  375 (375)
T ss_pred             HHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence            999999988765688999999999999999888744988864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4.3e-34  Score=263.05  Aligned_cols=296  Identities=24%  Similarity=0.413  Sum_probs=239.8

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEE-ecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVI-PTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++++.|++||+|+ ......|+.|++|..+..++|.+......|....
T Consensus        40 d~~~~~g~~~~~~~p~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (337)
T cd05283          40 DLHTLRNEWGPTKYPLVPG-HEI-VGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPD  117 (337)
T ss_pred             HHHHhcCCcCCCCCCcccC-cce-eeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccC
Confidence            4444556655455688999 999 999999999999999999998 4455689999999999999998764421111100


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      +             ....|+++||+.++++.++++|+++++++++.+.+.+.|||+++ +..++.++++++|.|+|.+|+
T Consensus       118 ~-------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~  183 (337)
T cd05283         118 G-------------TITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGH  183 (337)
T ss_pred             C-------------CcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHH
Confidence            0             01124899999999999999999999999999999999999987 446689999999988899999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++++|+.+|+ +|+++++++++.+.++++|++.+++.+.   .++..   +.  +.++|+++||+++...+..++++++
T Consensus       184 ~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~---~~--~~~~d~v~~~~g~~~~~~~~~~~l~  254 (337)
T cd05283         184 LAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD---PEAMK---KA--AGSLDLIIDTVSASHDLDPYLSLLK  254 (337)
T ss_pred             HHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc---hhhhh---hc--cCCceEEEECCCCcchHHHHHHHhc
Confidence            99999999999 9999999999999999999999888775   33322   21  3489999999998755789999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK  324 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~  324 (335)
                      ++ |+++.+|.... ...+++..++.+++++.++....   .+++..+++++.++++++  .+ +.++++++++||+.+.
T Consensus       255 ~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~  326 (337)
T cd05283         255 PG-GTLVLVGAPEE-PLPVPPFPLIFGRKSVAGSLIGG---RKETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLE  326 (337)
T ss_pred             CC-CEEEEEeccCC-CCccCHHHHhcCceEEEEecccC---HHHHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHH
Confidence            98 99999987653 33566666667899999887543   467888999999998754  34 6899999999999999


Q ss_pred             CCCee-eEEEe
Q 019822          325 QPDCV-KVLIT  334 (335)
Q Consensus       325 ~~~~~-k~vi~  334 (335)
                      +++.. |+|++
T Consensus       327 ~~~~~~k~v~~  337 (337)
T cd05283         327 KGDVRYRFVLD  337 (337)
T ss_pred             cCCCcceEeeC
Confidence            88865 88874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.1e-33  Score=260.71  Aligned_cols=295  Identities=26%  Similarity=0.379  Sum_probs=247.4

Q ss_pred             EeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            7 LISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         7 ~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      ++.+.|.++. ...|.++| ||+ +|+|+++|++++.+++||+|+..+ ...|+.|.+|..+..++|.+...  .|+...
T Consensus        43 ~~~~~g~~~~~~~~~~~~g-~e~-~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  118 (341)
T cd08297          43 LHAALGDWPVKPKLPLIGG-HEG-AGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKN--SGYTVD  118 (341)
T ss_pred             HHHHcCCCCcCCCCCccCC-ccc-ceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccc--cccccC
Confidence            3344455443 23466899 999 999999999999999999999776 57899999999999999988755  354444


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG  163 (335)
                      |                  ++++|+.++++.++++|+++++.+++.++..+.|||+++.. .++.++++|||+|+ +.+|
T Consensus       119 g------------------~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg  179 (341)
T cd08297         119 G------------------TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLG  179 (341)
T ss_pred             C------------------cceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHH
Confidence            4                  89999999999999999999999999999899999998755 58899999999987 7799


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++++|+++|+ +|+++.+++++.+.++++|++.+++++.   .++...+.++++++++|+++|+.++...+..+++++
T Consensus       180 ~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l  255 (341)
T cd08297         180 HLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYL  255 (341)
T ss_pred             HHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHh
Confidence            999999999999 9999999999999999999999998887   678888888887779999999887766889999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      +++ |+++.+|.......+++...++.+++++.+....   ..++++.++++++++++++  .+ +.+++++++++++.+
T Consensus       256 ~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~  328 (341)
T cd08297         256 RPG-GTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVG---TRQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKM  328 (341)
T ss_pred             hcC-CEEEEecCCCCCCCCCCHHHHHhcccEEEEeccC---CHHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHH
Confidence            997 9999998765333356666666788888875432   2467888999999998764  24 579999999999999


Q ss_pred             cCCCee-eEEEeC
Q 019822          324 KQPDCV-KVLITI  335 (335)
Q Consensus       324 ~~~~~~-k~vi~~  335 (335)
                      .+++.. |++++|
T Consensus       329 ~~~~~~gkvvi~~  341 (341)
T cd08297         329 EEGKIAGRVVVDF  341 (341)
T ss_pred             HcCCccceEEEeC
Confidence            887765 998875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=1.5e-33  Score=259.92  Aligned_cols=284  Identities=22%  Similarity=0.324  Sum_probs=233.6

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+++|++++.+++||+|+..+...|+.|++|..+.+++|.+...  .+...+|            
T Consensus        56 ~~p~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g------------  119 (341)
T PRK05396         56 PVPMVVG-HEF-VGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG--VGVNRPG------------  119 (341)
T ss_pred             CCCcccc-eee-EEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcce--eeecCCC------------
Confidence            4677999 999 99999999999999999999999999999999999999999987533  2333333            


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK  177 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~  177 (335)
                            +|++|+.++.+.++++|+++++++++.+ ..+.++++++..  ...++++|+|.|+|.+|++++++|+++|+++
T Consensus       120 ------~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~  190 (341)
T PRK05396        120 ------AFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARH  190 (341)
T ss_pred             ------cceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCE
Confidence                  8999999999999999999999888754 466666665532  3458999999888999999999999999866


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      |+++++++++.++++++|+++++++++   .++.+.++++++++++|++|||+|+...+...+++++++ |+++.+|...
T Consensus       191 v~~~~~~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  266 (341)
T PRK05396        191 VVITDVNEYRLELARKMGATRAVNVAK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPP  266 (341)
T ss_pred             EEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC
Confidence            888888999999999999999998887   678888888887779999999999877889999999998 9999998765


Q ss_pred             CccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCeeeEEEe
Q 019822          258 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT  334 (335)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~  334 (335)
                      . ..+++...+.++++++.++....  ....+..+++++.++ +++.+.+.+.++++++++|++.+.+++..|++++
T Consensus       267 ~-~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~  339 (341)
T PRK05396        267 G-DMAIDWNKVIFKGLTIKGIYGRE--MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILD  339 (341)
T ss_pred             C-CCcccHHHHhhcceEEEEEEccC--ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEe
Confidence            3 33444566667888888764221  224456788888888 5455557789999999999999887764588875

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.7e-34  Score=258.68  Aligned_cols=279  Identities=21%  Similarity=0.300  Sum_probs=229.9

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~   84 (335)
                      |++.+.|.++   +|.++| ||+ +|+|+++|++   +++||+|...++.+|+.|.+|..|..+.|...+.  .++. .+
T Consensus        40 d~~~~~g~~~---~~~~~G-~e~-~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  109 (319)
T cd08242          40 DLEIYKGYYP---FPGVPG-HEF-VGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTV--LGIVDRD  109 (319)
T ss_pred             cHHHHcCCCC---CCCccC-ceE-EEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcc--cCccCCC
Confidence            3344445443   577999 999 9999999997   7899999999999999999999999999987654  2332 23


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      |                  ++++|+.++.+.++++|++++.++++.+ ..+.++|. +.+..++.++++|||+|+|.+|+
T Consensus       110 g------------------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~  169 (319)
T cd08242         110 G------------------AFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGL  169 (319)
T ss_pred             C------------------ceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHH
Confidence            3                  8999999999999999999999888764 35556665 45778899999999999899999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+|+.+|+ +|+++++++++.++++++|++.++++++   .         +.++++|+++|++|+...+..++++++
T Consensus       170 ~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~  236 (319)
T cd08242         170 LIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA---E---------SEGGGFDVVVEATGSPSGLELALRLVR  236 (319)
T ss_pred             HHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc---c---------ccCCCCCEEEECCCChHHHHHHHHHhh
Confidence            99999999999 7999999999999999999988877654   1         345589999999998667899999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK  324 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~  324 (335)
                      ++ |+++..+... ....++...+..++.++.++..      ..++.++++++++++++.+++++.|+++++++||+.+.
T Consensus       237 ~~-g~~v~~~~~~-~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~  308 (319)
T cd08242         237 PR-GTVVLKSTYA-GPASFDLTKAVVNEITLVGSRC------GPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAA  308 (319)
T ss_pred             cC-CEEEEEcccC-CCCccCHHHheecceEEEEEec------ccHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHh
Confidence            97 9999876544 3455666666678888887643      23788999999999876666889999999999999998


Q ss_pred             CCCeeeEEEeC
Q 019822          325 QPDCVKVLITI  335 (335)
Q Consensus       325 ~~~~~k~vi~~  335 (335)
                      ++...|++++.
T Consensus       309 ~~~~~k~vi~~  319 (319)
T cd08242         309 EPGALKVLLRP  319 (319)
T ss_pred             cCCceEEEeCC
Confidence            77656998863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-33  Score=259.38  Aligned_cols=277  Identities=21%  Similarity=0.343  Sum_probs=221.8

Q ss_pred             CccccccccccceEEEEEeCCCCCc-ccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKE-VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL   96 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~   96 (335)
                      .+|.++| ||+ +|+|+++|++++. |++||+|+..+...|+.|+.|..|...            ..             
T Consensus        62 ~~~~~~g-~e~-~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~------------~~-------------  114 (341)
T cd08262          62 GADIVLG-HEF-CGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP------------EA-------------  114 (341)
T ss_pred             CCCcccc-cce-eEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc------------CC-------------
Confidence            3578899 999 9999999999987 999999999999999999999432110            01             


Q ss_pred             ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA  176 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~  176 (335)
                           .|+|++|+.++++.++++|+++++++++ ++.++++||+++ ..+++.++++|||+|+|.+|.+++|+|+.+|+.
T Consensus       115 -----~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~  187 (341)
T cd08262         115 -----PGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVG  187 (341)
T ss_pred             -----CCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence                 1389999999999999999999999877 556888999984 788999999999998899999999999999996


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCch-hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~-~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .++++++++++.+.++++|++++++++..... .+. .+.+.+.++++|+++|++|+...+..++++++++ |+++.+|.
T Consensus       188 ~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~  265 (341)
T cd08262         188 PIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGV  265 (341)
T ss_pred             EEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECC
Confidence            68888889999999999999889987751000 222 3445556668999999999854778899999997 99999987


Q ss_pred             CCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEEEe
Q 019822          256 GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi~  334 (335)
                      ... ...+.......+++.+.+....   ..+.+..++++++++.+.+.+++++.++++++++|++.+.+++.. |++++
T Consensus       266 ~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         266 CME-SDNIEPALAIRKELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             CCC-CCccCHHHHhhcceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            643 1222333334477777754322   235788899999999988766677899999999999999887754 88864

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.5e-33  Score=259.04  Aligned_cols=297  Identities=24%  Similarity=0.339  Sum_probs=245.7

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++++.|++||+|++.+...|+.|++|.++.++.|.....  +|....
T Consensus        43 d~~~~~g~~~~~~~~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~  118 (342)
T cd08266          43 DLWVRRGMPGIKLPLPHILG-SDG-AGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGI--LGEHVD  118 (342)
T ss_pred             HHHHhcCCCCCCCCCCeecc-cce-EEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccc--cccccC
Confidence            34444554432 24578999 999 99999999999999999999999999999999999999999987543  344333


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG  163 (335)
                      |                  ++++|+.++.+.++++|+++++++++++++.+.+|++++.+..++.++++++|+|+ +.+|
T Consensus       119 g------------------~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG  180 (342)
T cd08266         119 G------------------GYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVG  180 (342)
T ss_pred             c------------------ceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHH
Confidence            3                  89999999999999999999999999998899999999888888999999999987 7999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++++++..|+ +|+.+++++++.+.+++++.+.+++...   .++...+.+.+.++++|+++|++|.. .+...++++
T Consensus       181 ~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~-~~~~~~~~l  255 (342)
T cd08266         181 SAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRK---EDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSL  255 (342)
T ss_pred             HHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecCC---hHHHHHHHHHhCCCCCcEEEECCcHH-HHHHHHHHh
Confidence            999999999999 8999999999999998888877787765   66777777777666899999999986 778999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      +++ |+++.++........++....+.+++++.+.....   ...+..++++++++.+.+  ++++.|+++++++|++.+
T Consensus       256 ~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~  329 (342)
T cd08266         256 ARG-GRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRL  329 (342)
T ss_pred             hcC-CEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHH
Confidence            997 99999987654333445444455888888775432   356888999999998654  367889999999999998


Q ss_pred             cCCCee-eEEEeC
Q 019822          324 KQPDCV-KVLITI  335 (335)
Q Consensus       324 ~~~~~~-k~vi~~  335 (335)
                      .+++.. |+++++
T Consensus       330 ~~~~~~~kvv~~~  342 (342)
T cd08266         330 ESREQFGKIVLTP  342 (342)
T ss_pred             HhCCCCceEEEeC
Confidence            876654 888763

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=260.09  Aligned_cols=289  Identities=29%  Similarity=0.398  Sum_probs=237.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++...|.++...+|.++| ||+ +|+|+++|+++..+++||+|++.+..+|+.|.+|..|.++.|.....  +|...+|
T Consensus        41 d~~~~~g~~~~~~~~~~~g-~e~-~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g  116 (334)
T PRK13771         41 DLLQLQGFYPRMKYPVILG-HEV-VGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLG--YGEELDG  116 (334)
T ss_pred             hHHHhcCCCCCCCCCeecc-ccc-eEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccc--cccccCc
Confidence            4455566666556678999 999 99999999999889999999999888999999999999999988655  3433344


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL  164 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~  164 (335)
                                        ++++|+.++.+.++++|+++++.+++.+++.+.+||+++.+. .+.++++|||+|+ |.+|+
T Consensus       117 ------------------~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~  177 (334)
T PRK13771        117 ------------------FFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGI  177 (334)
T ss_pred             ------------------eeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHH
Confidence                              899999999999999999999999999999999999988554 8899999999987 99999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++++|+.+|+ +|+++++++++.+.++++ ++++++.++     +...++++  + ++|+++||+|+. .+..++++++
T Consensus       178 ~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~v~~~--~-~~d~~ld~~g~~-~~~~~~~~l~  246 (334)
T PRK13771        178 HAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGSK-----FSEEVKKI--G-GADIVIETVGTP-TLEESLRSLN  246 (334)
T ss_pred             HHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCchh-----HHHHHHhc--C-CCcEEEEcCChH-HHHHHHHHHh
Confidence            99999999999 899999999999999888 776665542     45556654  3 699999999986 6789999999


Q ss_pred             cCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822          245 VGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       245 ~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      ++ |+++.+|.... ...++.......+++++.+...   ...+++..+++++.++.++.  .+++.++++++++||+.+
T Consensus       247 ~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~  320 (334)
T PRK13771        247 MG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---ATKRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEEL  320 (334)
T ss_pred             cC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---CCHHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHH
Confidence            97 99999997653 2212333334457888887632   23567889999999998753  467899999999999999


Q ss_pred             cCCCee-eEEEe
Q 019822          324 KQPDCV-KVLIT  334 (335)
Q Consensus       324 ~~~~~~-k~vi~  334 (335)
                      .+++.. |+++.
T Consensus       321 ~~~~~~~kvv~~  332 (334)
T PRK13771        321 KDKSRIGKILVK  332 (334)
T ss_pred             HcCCCcceEEEe
Confidence            876654 88875

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=3.3e-33  Score=257.17  Aligned_cols=291  Identities=24%  Similarity=0.357  Sum_probs=236.1

Q ss_pred             EeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            7 LISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         7 ~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      ++.+.|.++. ..|.++| ||+ +|+|+++|++++.|++||+|++.+ ...|+.|+.|..+..+.|.+...  .|+..+|
T Consensus        42 ~~~~~g~~~~-~~~~~~g-~e~-~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g  116 (338)
T PRK09422         42 LHVANGDFGD-KTGRILG-HEG-IGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN--AGYTVDG  116 (338)
T ss_pred             HHHHcCCCCC-CCCccCC-ccc-ceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccc--cCccccC
Confidence            3344455443 2367899 999 999999999999999999998654 56899999999999999987643  3444444


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                                        ++++|+.++.+.++++|+++++++++.++..+.|||+++ +.+++.++++|||+|+|++|++
T Consensus       117 ------------------~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~  177 (338)
T PRK09422        117 ------------------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNL  177 (338)
T ss_pred             ------------------cceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHH
Confidence                              899999999999999999999999999999999999987 7788999999999999999999


Q ss_pred             HHHHHHH-cCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          166 AVDGARM-HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       166 ai~la~~-~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      ++++|+. .|+ +|+++++++++++.++++|++.+++++.  ..++...+++.++  ++|+++++.++...+..++++++
T Consensus       178 ~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~v~~~~~--~~d~vi~~~~~~~~~~~~~~~l~  252 (338)
T PRK09422        178 ALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR--VEDVAKIIQEKTG--GAHAAVVTAVAKAAFNQAVDAVR  252 (338)
T ss_pred             HHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc--cccHHHHHHHhcC--CCcEEEEeCCCHHHHHHHHHhcc
Confidence            9999998 599 9999999999999999999999988753  1346667777665  68855554455558899999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK  324 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~  324 (335)
                      .+ |+++.+|.... ..+++...+..++..+.++...   ..+++..++++++++.++.  .++ .++++++++||+.+.
T Consensus       253 ~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~l~~--~v~-~~~~~~~~~a~~~~~  324 (338)
T PRK09422        253 AG-GRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVG---TRQDLEEAFQFGAEGKVVP--KVQ-LRPLEDINDIFDEME  324 (338)
T ss_pred             CC-CEEEEEeeCCC-CceecHHHHhhcCcEEEEecCC---CHHHHHHHHHHHHhCCCCc--cEE-EEcHHHHHHHHHHHH
Confidence            97 99999987543 3445555666678888775432   2457888999999998754  354 689999999999998


Q ss_pred             CCCee-eEEEe
Q 019822          325 QPDCV-KVLIT  334 (335)
Q Consensus       325 ~~~~~-k~vi~  334 (335)
                      +++.. |++++
T Consensus       325 ~~~~~gkvvv~  335 (338)
T PRK09422        325 QGKIQGRMVID  335 (338)
T ss_pred             cCCccceEEEe
Confidence            87765 88775

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=260.43  Aligned_cols=258  Identities=21%  Similarity=0.236  Sum_probs=213.8

Q ss_pred             Ccccccccc--ccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCce
Q 019822           18 LFILVFSGT--KVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQK   95 (335)
Q Consensus        18 ~~p~v~G~~--e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~   95 (335)
                      .+|.++| +  |+ +|+|+.+|++++.|++||+|+..                                           
T Consensus        71 ~~p~~~G-~~~~~-~G~v~~vg~~v~~~~~Gd~V~~~-------------------------------------------  105 (348)
T PLN03154         71 LPPFVPG-QRIEG-FGVSKVVDSDDPNFKPGDLISGI-------------------------------------------  105 (348)
T ss_pred             CCCcCCC-CeeEe-eEEEEEEecCCCCCCCCCEEEec-------------------------------------------
Confidence            3588999 8  88 99999999999999999999531                                           


Q ss_pred             eecccccccceeeEEecccc--eE--EcCCCCCcc-cccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHH
Q 019822           96 LYHIFSCSTWSEYMVIDANY--VV--KVDPSIDPS-DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDG  169 (335)
Q Consensus        96 ~~~~~~~g~~~~~~~v~~~~--~~--~lp~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~l  169 (335)
                             |+|+||+.++++.  +.  ++|++++++ +++++++++.|||+++.+..+++++++|||+|+ |++|++++|+
T Consensus       106 -------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiql  178 (348)
T PLN03154        106 -------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQL  178 (348)
T ss_pred             -------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHH
Confidence                   2799999998753  54  459999986 688899999999999988889999999999987 9999999999


Q ss_pred             HHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCe
Q 019822          170 ARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG  248 (335)
Q Consensus       170 a~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G  248 (335)
                      |+.+|+ +|+++++++++.+.++ ++|+++++++++  ..++.+.+++.+++ ++|++||++|+. .+..++++++++ |
T Consensus       179 Ak~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~-gvD~v~d~vG~~-~~~~~~~~l~~~-G  252 (348)
T PLN03154        179 AKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPE-GIDIYFDNVGGD-MLDAALLNMKIH-G  252 (348)
T ss_pred             HHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCC-CcEEEEECCCHH-HHHHHHHHhccC-C
Confidence            999999 8999999999999987 799999999874  13677778877764 899999999986 789999999998 9


Q ss_pred             EEEEEccCCCccc-----cchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          249 KVIVIGVGVDAMV-----PLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       249 ~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      +++.+|...+...     .++...++.+++++.|+....+.  ..+.+.++++++++|++++.  +.++|+|+++++|++
T Consensus       253 ~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~  330 (348)
T PLN03154        253 RIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALV  330 (348)
T ss_pred             EEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHH
Confidence            9999997653221     12455677789999988654321  12457789999999998754  667899999999999


Q ss_pred             HhcCCCee-eEEEeC
Q 019822          322 LLKQPDCV-KVLITI  335 (335)
Q Consensus       322 ~~~~~~~~-k~vi~~  335 (335)
                      .+.+++.. |+|+++
T Consensus       331 ~l~~g~~~GKvVl~~  345 (348)
T PLN03154        331 GLFSGKNVGKQVIRV  345 (348)
T ss_pred             HHHcCCCCceEEEEe
Confidence            99988865 999864

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=4.5e-33  Score=256.44  Aligned_cols=285  Identities=25%  Similarity=0.358  Sum_probs=229.7

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cCCCccccccCcee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKL   96 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~   96 (335)
                      .+|.++| ||+ +|+|+++|+++..|++||+|+..+..+|+.|++|.-|+.+.|.+..+  ++.. .+.           
T Consensus        52 ~~p~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~-----------  116 (339)
T cd08232          52 REPMVLG-HEV-SGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRF--LGSAMRFP-----------  116 (339)
T ss_pred             cCCeecC-ccc-eEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccc--eeeccccC-----------
Confidence            3577999 999 99999999999999999999999999999999999999999997543  1211 000           


Q ss_pred             ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA  176 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~  176 (335)
                         ...|+|++|+.++++.++++|+++++++++. ..+++++|+++.+.... ++++|||.|+|.+|.+++++|+.+|+.
T Consensus       117 ---~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~  191 (339)
T cd08232         117 ---HVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAA  191 (339)
T ss_pred             ---CCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence               0124899999999999999999999999876 46888999987555555 899999998899999999999999986


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhh-CCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT-HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~-~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      +|+++++++++.+.++++|+++++++++   .++    .++. .+.++|+++|++++...++..+++++++ |+++.++.
T Consensus       192 ~v~~~~~s~~~~~~~~~~g~~~vi~~~~---~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~  263 (339)
T cd08232         192 EIVATDLADAPLAVARAMGADETVNLAR---DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGM  263 (339)
T ss_pred             EEEEECCCHHHHHHHHHcCCCEEEcCCc---hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEec
Confidence            7999998899999889999999998875   332    2222 2336999999999765789999999997 99999986


Q ss_pred             CCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCe-eeEEEe
Q 019822          256 GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-VKVLIT  334 (335)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~-~k~vi~  334 (335)
                      .. .....+...++.+++.+.+...    ....+..++++++++.+++.+.+.++++++++++|++.+.+++. .|++++
T Consensus       264 ~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  338 (339)
T cd08232         264 LG-GPVPLPLNALVAKELDLRGSFR----FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLS  338 (339)
T ss_pred             CC-CCccCcHHHHhhcceEEEEEec----CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEe
Confidence            54 2333444444557778776642    23568889999999998776667789999999999999887665 499886


Q ss_pred             C
Q 019822          335 I  335 (335)
Q Consensus       335 ~  335 (335)
                      +
T Consensus       339 ~  339 (339)
T cd08232         339 F  339 (339)
T ss_pred             C
Confidence            4

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=3.6e-33  Score=257.45  Aligned_cols=298  Identities=26%  Similarity=0.406  Sum_probs=240.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++ ...|.++| +|+ +|+|+++|+++..|++||+|+..+...|+.|++|..++++.|.....  +|....|
T Consensus        40 d~~~~~~~~~-~~~~~~~g-~~~-~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g  114 (343)
T cd08236          40 DIPRYLGTGA-YHPPLVLG-HEF-SGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY--IGSRRDG  114 (343)
T ss_pred             chHhhcCCCC-CCCCcccC-cce-EEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcce--EecccCC
Confidence            3333444432 23577899 999 99999999999999999999999888999999999999999987543  3433333


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                                        +|++|+.++++.++++|+++++++++++ ..+++||+++. ...+.++++|||+|+|.+|.+
T Consensus       115 ------------------~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~  174 (343)
T cd08236         115 ------------------AFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLL  174 (343)
T ss_pred             ------------------cccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHH
Confidence                              8999999999999999999999998887 57889999885 788999999999988999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++++|+.+|+..|+++++++++.+.++++|++.+++++.   .. ...+++..+++++|+++||+|....+..+++++++
T Consensus       175 ~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~---~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~  250 (343)
T cd08236         175 AIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE---ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARP  250 (343)
T ss_pred             HHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc---cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhc
Confidence            999999999944999999999999999999999998876   55 66777777777899999999876678999999999


Q ss_pred             CCeEEEEEccCCCc-c-ccchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          246 GKGKVIVIGVGVDA-M-VPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       246 ~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      + |+++.+|..... . ...+...++.++.++.++......  ..+.+..++++++++.+.+.+.+.+.+++++++++++
T Consensus       251 ~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  329 (343)
T cd08236         251 G-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFE  329 (343)
T ss_pred             C-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHH
Confidence            7 999999865431 1 122333445678888887653321  1356788899999999764444667899999999999


Q ss_pred             HhcC-CCee-eEEE
Q 019822          322 LLKQ-PDCV-KVLI  333 (335)
Q Consensus       322 ~~~~-~~~~-k~vi  333 (335)
                      .+.+ +... |+|+
T Consensus       330 ~~~~~~~~~~k~v~  343 (343)
T cd08236         330 RLADREEFSGKVLL  343 (343)
T ss_pred             HHHcCCCCeeEEeC
Confidence            9987 4443 7764

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=1.1e-33  Score=258.86  Aligned_cols=269  Identities=17%  Similarity=0.153  Sum_probs=217.4

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCc-ccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKE-VKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|+++.+ |++||+|+....                            .
T Consensus        46 d~~~~~g~~~~~~~~p~v~G-~e~-~G~V~~vG~~v~~~~~vGd~V~~~~~----------------------------~   95 (324)
T cd08291          46 DLGFLKGQYGSTKALPVPPG-FEG-SGTVVAAGGGPLAQSLIGKRVAFLAG----------------------------S   95 (324)
T ss_pred             HHHHhcCcCCCCCCCCcCCC-cce-EEEEEEECCCccccCCCCCEEEecCC----------------------------C
Confidence            44455566553 35789999 999 9999999999986 999999975311                            0


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE-c-CCH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-G-LGT  161 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~-G-~g~  161 (335)
                      +                  |+|++|+.+|++.++++|+++++++++++++.+.|||. +.+.... +++.++|+ | +|+
T Consensus        96 ~------------------g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~  155 (324)
T cd08291          96 Y------------------GTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASA  155 (324)
T ss_pred             C------------------CcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccH
Confidence            1                  38999999999999999999999999988888889975 4455555 55566665 4 599


Q ss_pred             HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822          162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE  241 (335)
Q Consensus       162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~  241 (335)
                      +|++++|+|+.+|+ +|+++++++++.+.++++|+++++++++   .++.+.++++++++++|++||++|+. .....++
T Consensus       156 vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~  230 (324)
T cd08291         156 LGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGG-LTGQILL  230 (324)
T ss_pred             HHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHH
Confidence            99999999999999 8999999999999999999999999887   77888899988888999999999987 5678899


Q ss_pred             hhccCCeEEEEEccCCCccc-cchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          242 TTKVGKGKVIVIGVGVDAMV-PLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       242 ~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      +++++ |+++.+|....... .++...+..+++++.++....+..   .+.++.++++++ +.+  .+.++++|+|+|++
T Consensus       231 ~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~  306 (324)
T cd08291         231 AMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTL  306 (324)
T ss_pred             hhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHH
Confidence            99997 99999997654222 255556667899999887654421   235677788887 664  45688999999999


Q ss_pred             HHHHHhcCCCe-eeEEE
Q 019822          318 KAIQLLKQPDC-VKVLI  333 (335)
Q Consensus       318 ea~~~~~~~~~-~k~vi  333 (335)
                      +|++.+.+++. +|+++
T Consensus       307 ~a~~~~~~~~~~Gkvv~  323 (324)
T cd08291         307 EAIAFYSKNMSTGKKLL  323 (324)
T ss_pred             HHHHHHHhCCCCCeEEe
Confidence            99999988765 48886

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=6.3e-33  Score=255.73  Aligned_cols=285  Identities=28%  Similarity=0.430  Sum_probs=232.3

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+.+|+++..+++||+|+..+.++|+.|+.|..|.+++|....+  .|....             
T Consensus        56 ~~~~~~g-~e~-~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------  118 (341)
T cd05281          56 KPPLIFG-HEF-AGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI--LGVDTD-------------  118 (341)
T ss_pred             CCCcccc-cce-EEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccce--EeccCC-------------
Confidence            3567899 999 99999999999999999999999999999999999999999975322  333223             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK  177 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~  177 (335)
                           |+|++|+.++++.++++|++++++.+ ++..++.++++++.  ....++++|||.|+|.+|++++++|+.+|+.+
T Consensus       119 -----g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~  190 (341)
T cd05281         119 -----GCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASL  190 (341)
T ss_pred             -----CcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence                 38999999999999999999998555 45557788888764  45578999999988999999999999999866


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      |+++++++++.+.++++|++++++++.   .++. .++++++++++|++||++|+...+..++++++++ |+++.+|...
T Consensus       191 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  265 (341)
T cd05281         191 VIASDPNPYRLELAKKMGADVVINPRE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPP  265 (341)
T ss_pred             EEEECCCHHHHHHHHHhCcceeeCccc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC
Confidence            888888899999999999999988876   6677 7888888789999999998876789999999998 9999998654


Q ss_pred             CccccchhH-HHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          258 DAMVPLNVI-ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       258 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      . ...++.. .+..+++.+.+....  ...+.+..+++++.++.+.+.+++++.++++++++||+.+.+++..|++++.
T Consensus       266 ~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~  341 (341)
T cd05281         266 G-PVDIDLNNLVIFKGLTVQGITGR--KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP  341 (341)
T ss_pred             C-CcccccchhhhccceEEEEEecC--CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence            3 2222222 245577777765421  1235677889999999987666677889999999999999887744988763

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=9.2e-33  Score=254.54  Aligned_cols=286  Identities=27%  Similarity=0.382  Sum_probs=235.3

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+++|++++.|++||+|+..+...|+.|.+|..+..+.|.+...  +|+...|            
T Consensus        54 ~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g------------  117 (340)
T TIGR00692        54 KPPQVVG-HEV-AGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI--FGVDTDG------------  117 (340)
T ss_pred             CCCcccc-cce-EEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcce--EeecCCC------------
Confidence            3567899 999 99999999999999999999999999999999999999999998644  2333333            


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAK  177 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~  177 (335)
                            ++++|+.++++.++++|++++++.+ +++.++.++++++  .....++++|+|.|+|.+|.+++++|+.+|++.
T Consensus       118 ------~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~  188 (340)
T TIGR00692       118 ------CFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYP  188 (340)
T ss_pred             ------cceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence                  8999999999999999999998655 4566888888876  345678999999888999999999999999944


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      |+++++++++.+.++++|++.+++++.   .++.+.+.++++++++|+++|++++...+...+++++++ |+++.+|...
T Consensus       189 v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~  264 (340)
T TIGR00692       189 VIVSDPNEYRLELAKKMGATYVVNPFK---EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPP  264 (340)
T ss_pred             EEEECCCHHHHHHHHHhCCcEEEcccc---cCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCC
Confidence            889988899999999999988888876   678888888888789999999998776789999999997 9999998754


Q ss_pred             CccccchhH-HHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          258 DAMVPLNVI-ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       258 ~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      . ..+++.. .+..+++.+.+... . ...+.+..++++++++++++.+++++.+++++++++++.+.+++..|+++++
T Consensus       265 ~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~  340 (340)
T TIGR00692       265 G-KVTIDFTNKVIFKGLTIYGITG-R-HMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL  340 (340)
T ss_pred             C-CcccchhhhhhhcceEEEEEec-C-CchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            2 2233333 45557777776541 1 1234577889999999987655577899999999999998876656888864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=4e-33  Score=254.95  Aligned_cols=270  Identities=19%  Similarity=0.206  Sum_probs=224.6

Q ss_pred             EeEeecCCC-CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            7 LISFALKDS-QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         7 ~~~~~g~~~-~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      ++.+.|.++ ...+|.++| ||+ +|+|+++|++++.|++||+|+...                             .+ 
T Consensus        45 ~~~~~g~~~~~~~~p~~~G-~e~-~G~V~~~G~~v~~~~~Gd~V~~~~-----------------------------~~-   92 (324)
T cd08292          45 LWTIRGTYGYKPELPAIGG-SEA-VGVVDAVGEGVKGLQVGQRVAVAP-----------------------------VH-   92 (324)
T ss_pred             HHHhcCcCCCCCCCCCCCC-cce-EEEEEEeCCCCCCCCCCCEEEecc-----------------------------CC-
Confidence            344456554 245688999 999 999999999999999999997532                             11 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL  164 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~  164 (335)
                                       |+|++|+.+++..++++|+++++++++++++.+.++|+++ ...++.++++|||+|+ |.+|+
T Consensus        93 -----------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~  154 (324)
T cd08292          93 -----------------GTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGK  154 (324)
T ss_pred             -----------------CcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHH
Confidence                             3899999999999999999999999999988889999976 5588999999999986 99999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++++|+.+|+ +++++..++++.+.++++|+++++++++   .++...++++++++++|++||++|+. ....++++++
T Consensus       155 ~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~  229 (324)
T cd08292         155 LVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQ---PGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLG  229 (324)
T ss_pred             HHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCC---chHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhc
Confidence            99999999999 8999988899999988899999998887   77888899999988999999999987 6789999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC-------cCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      ++ |+++.+|.......++++.....+++++.++....+..       ...+..+++++.++.+++.  +.+.|+++++.
T Consensus       230 ~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~  306 (324)
T cd08292         230 EG-GTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAA  306 (324)
T ss_pred             CC-cEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHH
Confidence            97 99999987643344556555666899999887543211       2357789999999998754  46789999999


Q ss_pred             HHHHHhcCCCee-eEEEe
Q 019822          318 KAIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       318 ea~~~~~~~~~~-k~vi~  334 (335)
                      +|++.+.+++.. |++++
T Consensus       307 ~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         307 KAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHHHcCCCCceEEeC
Confidence            999998876554 87763

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=1.9e-33  Score=238.72  Aligned_cols=268  Identities=22%  Similarity=0.221  Sum_probs=221.5

Q ss_pred             CeE-EEEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccc
Q 019822            2 PVF-VTLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN   79 (335)
Q Consensus         2 ~~~-~d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~   79 (335)
                      ||. .|+...+|.||. +.+|.|-| +|+ +|+|+.+|+++++|++||+|+....                         
T Consensus        58 PINPsDIN~IQGvYpvrP~~PAVgG-nEG-v~eVv~vGs~vkgfk~Gd~VIp~~a-------------------------  110 (354)
T KOG0025|consen   58 PINPSDINQIQGVYPVRPELPAVGG-NEG-VGEVVAVGSNVKGFKPGDWVIPLSA-------------------------  110 (354)
T ss_pred             CCChHHhhhhccccCCCCCCCcccC-Ccc-eEEEEEecCCcCccCCCCeEeecCC-------------------------
Confidence            444 588889999998 68998888 999 9999999999999999999985432                         


Q ss_pred             ccccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC
Q 019822           80 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL  159 (335)
Q Consensus        80 g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~  159 (335)
                                           ++|+|++|.+++++.++++++.++++.||++..+.+|||.+|.+...+.+|++|+-.|+
T Consensus       111 ---------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNga  169 (354)
T KOG0025|consen  111 ---------------------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGA  169 (354)
T ss_pred             ---------------------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCc
Confidence                                 24699999999999999999999999999999999999999988899999999999998


Q ss_pred             -CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH
Q 019822          160 -GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS  234 (335)
Q Consensus       160 -g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~  234 (335)
                       +.||.+.+|+|+++|+ +-+.+.|+....+.    ++.+||++|+...++....+   .+......++.+.+||+|+. 
T Consensus       170 nS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~---~k~~~~~~~prLalNcVGGk-  244 (354)
T KOG0025|consen  170 NSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKM---KKFKGDNPRPRLALNCVGGK-  244 (354)
T ss_pred             ccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhh---hhhhccCCCceEEEeccCch-
Confidence             9999999999999999 66666666655554    46799999996654222222   22222344789999999998 


Q ss_pred             HHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCc--------CcHHHHHHHHhCCCCCCCCc
Q 019822          235 LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTK--------SDLPTLLDKCKNKEFKLHQL  306 (335)
Q Consensus       235 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~~i~~~~~~~~~~  306 (335)
                      ....+.+.|.++ |+++.+|.++..++.++...++++++.++|+.+..+...        +.+.++.++++.|++..+  
T Consensus       245 sa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--  321 (354)
T KOG0025|consen  245 SATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--  321 (354)
T ss_pred             hHHHHHHHHhcC-ceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--
Confidence            557899999998 999999998888888999999999999999998888432        224578899999998766  


Q ss_pred             eeEEeechhHHHHHHHhcC
Q 019822          307 LTHHVKLEEIDKAIQLLKQ  325 (335)
Q Consensus       307 ~~~~~~l~~~~ea~~~~~~  325 (335)
                      -.+..+|++...|++...+
T Consensus       322 ~~e~v~L~~~~tald~~L~  340 (354)
T KOG0025|consen  322 NCEKVPLADHKTALDAALS  340 (354)
T ss_pred             cceeeechhhhHHHHHHHH
Confidence            3456789888888875543

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-32  Score=252.14  Aligned_cols=290  Identities=29%  Similarity=0.435  Sum_probs=237.2

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++....|.++| ||+ +|+|+++|++++.|++||+|+......|+.|++|..+.++.|.+...  +|...+ 
T Consensus        41 d~~~~~g~~~~~~~~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-  115 (332)
T cd08259          41 DLLFWKGFFPRGKYPLILG-HEI-VGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAE--YGEEVD-  115 (332)
T ss_pred             hhHHhcCCCCCCCCCeecc-ccc-eEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccc--cccccC-
Confidence            5555667666555678999 999 99999999999999999999999988999999999999999987522  343333 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL  164 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~  164 (335)
                                       |++++|+.++...++++|+++++++++.+++++.+||+++.. ..+.+++++||+|+ |.+|+
T Consensus       116 -----------------g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~  177 (332)
T cd08259         116 -----------------GGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGI  177 (332)
T ss_pred             -----------------CeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHH
Confidence                             389999999999999999999999999999999999999866 88999999999987 99999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++++++..|+ +|+++++++++.+.+++++.+.+++.+    . +.+.+.+..   ++|+++|++|.. ....++++++
T Consensus       178 ~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~---~~d~v~~~~g~~-~~~~~~~~~~  247 (332)
T cd08259         178 HAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS----K-FSEDVKKLG---GADVVIELVGSP-TIEESLRSLN  247 (332)
T ss_pred             HHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH----H-HHHHHHhcc---CCCEEEECCChH-HHHHHHHHhh
Confidence            99999999999 899999999999999889988777554    2 555565543   799999999987 5788999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK  324 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~  324 (335)
                      ++ |+++.++........+.......++..+.++..   ....++..+++++.++.+++  .+++.++++++++||+.+.
T Consensus       248 ~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~  321 (332)
T cd08259         248 KG-GRLVLIGNVTPDPAPLRPGLLILKEIRIIGSIS---ATKADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLK  321 (332)
T ss_pred             cC-CEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecC---CCHHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHH
Confidence            97 999999876542222233333347777776531   13456888999999998654  3678999999999999998


Q ss_pred             CCCee-eEEEe
Q 019822          325 QPDCV-KVLIT  334 (335)
Q Consensus       325 ~~~~~-k~vi~  334 (335)
                      +++.. |++++
T Consensus       322 ~~~~~~kvv~~  332 (332)
T cd08259         322 SGKVVGRIVLK  332 (332)
T ss_pred             cCCcccEEEeC
Confidence            87765 87763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.4e-33  Score=255.60  Aligned_cols=274  Identities=22%  Similarity=0.295  Sum_probs=223.8

Q ss_pred             CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822           17 RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL   96 (335)
Q Consensus        17 ~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~   96 (335)
                      ..+|.++| ||+ +|+|+++|++++.|++||+|+..+...|+.|..|.     .|.   .  .|...+|           
T Consensus        75 ~~~p~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~-----~~~---~--~~~~~~g-----------  131 (350)
T cd08274          75 LSFPRIQG-ADI-VGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA-----DID---Y--IGSERDG-----------  131 (350)
T ss_pred             CCCCcccC-Ccc-eEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc-----ccc---c--cCCCCCc-----------
Confidence            35688999 999 99999999999999999999998888888876642     111   0  1222223           


Q ss_pred             ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCC
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGA  175 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~  175 (335)
                             ++++|+.++...++++|+++++.+++++++++.|||+++ +..++.++++|||+|+ |++|++++++|+.+|+
T Consensus       132 -------~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~  203 (350)
T cd08274         132 -------GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA  203 (350)
T ss_pred             -------cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC
Confidence                   899999999999999999999999999999999999987 7788999999999997 9999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          176 AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       176 ~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                       +|+++++++ +.+.++++|++.+++...   ..+.+  ...+.++++|++||++|+. .+..++++++++ |+++.+|.
T Consensus       204 -~vi~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~  274 (350)
T cd08274         204 -IVIAVAGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGP-LFPDLLRLLRPG-GRYVTAGA  274 (350)
T ss_pred             -EEEEEeCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHH-HHHHHHHHhccC-CEEEEecc
Confidence             788888665 888889999876666543   33333  4556677999999999986 789999999998 99999986


Q ss_pred             CCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEEEe
Q 019822          256 GVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi~  334 (335)
                      ......++++..++.+++++.++....   ...+.++++++.++++++  ++++.++++++++|++.+.+++.. |++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         275 IAGPVVELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             cCCccccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence            543225667777677899998876532   457888999999998654  366789999999999999877654 88876


Q ss_pred             C
Q 019822          335 I  335 (335)
Q Consensus       335 ~  335 (335)
                      +
T Consensus       350 ~  350 (350)
T cd08274         350 P  350 (350)
T ss_pred             C
Confidence            3

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=3.4e-32  Score=249.95  Aligned_cols=293  Identities=25%  Similarity=0.364  Sum_probs=238.6

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++...|.++. .+|.++| +|+ +|+|+++|++++.+++||+|+......|+.|++|..+.++.|.....  .|...+|
T Consensus        40 d~~~~~g~~~~-~~p~~~g-~~~-~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g  114 (334)
T cd08234          40 DLHIYEGEFGA-APPLVPG-HEF-AGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTA--VGVTRNG  114 (334)
T ss_pred             hhHHhcCCCCC-CCCcccc-cce-EEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcce--eccCCCC
Confidence            44445565543 3678999 999 99999999999999999999998888999999999999999986532  2322333


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                                        ++++|+.++++.++++|+++++.+++.+ ..+.++++++ +.+++.++++|||+|+|.+|.+
T Consensus       115 ------------------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~  174 (334)
T cd08234         115 ------------------GFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLL  174 (334)
T ss_pred             ------------------cceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence                              8999999999999999999999998776 6788899887 7889999999999988999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++++|+..|+++|+++++++++.+.++++|++.+++.+.   .++...  +.+.++++|+++|+++....+...++++++
T Consensus       175 ~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~  249 (334)
T cd08234         175 LAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR---EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARR  249 (334)
T ss_pred             HHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC---CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhc
Confidence            999999999944899999999999999999888888775   444444  344556899999999876688899999999


Q ss_pred             CCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822          246 GKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK  324 (335)
Q Consensus       246 ~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~  324 (335)
                      + |+++.+|.... ...+++...+..+++++.+....    ...++.++++++++++.+.+++++++++++++++++.+.
T Consensus       250 ~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~  324 (334)
T cd08234         250 G-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMR  324 (334)
T ss_pred             C-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHh
Confidence            7 99999987653 34455555555577888776532    356888999999999876665678899999999999998


Q ss_pred             CCCeeeEEE
Q 019822          325 QPDCVKVLI  333 (335)
Q Consensus       325 ~~~~~k~vi  333 (335)
                      +....|+++
T Consensus       325 ~~~~~k~vi  333 (334)
T cd08234         325 SGGALKVVV  333 (334)
T ss_pred             cCCceEEEe
Confidence            833348776

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.5e-32  Score=251.39  Aligned_cols=268  Identities=28%  Similarity=0.376  Sum_probs=222.6

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+++|++++.|++||+|++.+...|+.|.+|..|.++.|.+..+  +|+..+|            
T Consensus        53 ~~~~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~--~~~~~~g------------  116 (325)
T cd08264          53 PMPHIPG-AEF-AGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGI--IGVVSNG------------  116 (325)
T ss_pred             CCCeecc-cce-eEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccce--eeccCCC------------
Confidence            3577899 999 99999999999999999999999988999999999999999997654  3443333            


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA  176 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~  176 (335)
                            +|++|+.++++.++++|+++++++++.+++.+.+||+++. .+++.++++|+|+|+ |++|++++++|+++|+ 
T Consensus       117 ------~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-  188 (325)
T cd08264         117 ------GYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-  188 (325)
T ss_pred             ------ceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-
Confidence                  8999999999999999999999999999999999999875 488999999999997 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +|+++++    .+.++++|++++++.++     ....+++++  +++|+++|++|+. .+..++++++++ |+++.+|..
T Consensus       189 ~v~~~~~----~~~~~~~g~~~~~~~~~-----~~~~l~~~~--~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~  255 (325)
T cd08264         189 EVIAVSR----KDWLKEFGADEVVDYDE-----VEEKVKEIT--KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTL  255 (325)
T ss_pred             eEEEEeH----HHHHHHhCCCeeecchH-----HHHHHHHHh--CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecC
Confidence            8888863    36678899988887764     345566666  4899999999985 889999999997 999999875


Q ss_pred             CCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee
Q 019822          257 VDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV  329 (335)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~  329 (335)
                      .....+++...+..++.++.++..+.   ++.+..+++++...+  .  .+++.++++++++|++.+.+++..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~  321 (325)
T cd08264         256 TGGEVKLDLSDLYSKQISIIGSTGGT---RKELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERD  321 (325)
T ss_pred             CCCCCccCHHHHhhcCcEEEEccCCC---HHHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCc
Confidence            33345666666766777887765432   457888888885433  2  356789999999999998876654

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=1.7e-32  Score=251.66  Aligned_cols=288  Identities=25%  Similarity=0.389  Sum_probs=234.0

Q ss_pred             EeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            7 LISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         7 ~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      ++.+.|.++...+|.++| ||+ +|+|+++|++++.|++||+|++.+. .+|+.|++|+++..+.|.+..+.  ++..+|
T Consensus        41 ~~~~~g~~~~~~~p~~~g-~e~-~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g  116 (330)
T cd08245          41 LHAAEGDWGGSKYPLVPG-HEI-VGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNT--GYTTQG  116 (330)
T ss_pred             HHHHcCCCCCCCCCcccC-ccc-eEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCcccc--CcccCC
Confidence            334455554445688999 999 9999999999999999999988665 67999999999999999987653  332333


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                                        ++++|+.+++++++++|+++++.+++.+.+.+.+||+++.. .++.++++|||+|+|.+|++
T Consensus       117 ------------------~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~  177 (330)
T cd08245         117 ------------------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHL  177 (330)
T ss_pred             ------------------ccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHH
Confidence                              89999999999999999999999999999899999998854 78999999999988889999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++++|+.+|+ +|+++++++++.+.++++|++.+++.+.   ......    .. +++|+++|+++.......+++++++
T Consensus       178 ~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~----~~-~~~d~vi~~~~~~~~~~~~~~~l~~  248 (330)
T cd08245         178 AVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA---ELDEQA----AA-GGADVILVTVVSGAAAEAALGGLRR  248 (330)
T ss_pred             HHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC---cchHHh----cc-CCCCEEEECCCcHHHHHHHHHhccc
Confidence            9999999999 9999999999999999999988887664   333222    22 3799999998876688999999999


Q ss_pred             CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822          246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ  325 (335)
Q Consensus       246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~  325 (335)
                      + |+++.++........+...++..++.++.++..+.   ...+..+++++.++.+.+   ..+.+++++++++|+.+.+
T Consensus       249 ~-G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~  321 (330)
T cd08245         249 G-GRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---RADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEK  321 (330)
T ss_pred             C-CEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---HHHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHc
Confidence            7 99999986543223333445666788888776432   356788899999998764   3468999999999999987


Q ss_pred             CCee-eEEE
Q 019822          326 PDCV-KVLI  333 (335)
Q Consensus       326 ~~~~-k~vi  333 (335)
                      ++.. |+++
T Consensus       322 ~~~~~~~v~  330 (330)
T cd08245         322 GDVRFRFVL  330 (330)
T ss_pred             CCCCcceeC
Confidence            7665 6653

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.7e-32  Score=251.55  Aligned_cols=281  Identities=24%  Similarity=0.331  Sum_probs=230.5

Q ss_pred             EeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            7 LISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         7 ~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      ++.+.|.++...+|.++| ||+ +|+|+++|+++..|++||+|++.+ ...|+.|++|..+.+++|....+.  |+..+|
T Consensus        46 ~~~~~g~~~~~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g  121 (329)
T cd08298          46 LHIVEGDLPPPKLPLIPG-HEI-VGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT--GYTVDG  121 (329)
T ss_pred             HHHHhCCCCCCCCCcccc-ccc-cEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc--ccccCC
Confidence            344456666556788999 999 999999999999999999998755 468999999999999999877653  443344


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                                        +|++|+.++.+.++++|+++++.+++.+++++.|||+++ +.+++.++++|||+|+|++|++
T Consensus       122 ------------------~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~  182 (329)
T cd08298         122 ------------------GYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHL  182 (329)
T ss_pred             ------------------ceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHH
Confidence                              899999999999999999999999999999999999988 8899999999999999999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++++++..|+ +|+++++++++++.++++|++.+++.+.   .          .++++|+++++.+....++.+++++++
T Consensus       183 ~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~----------~~~~vD~vi~~~~~~~~~~~~~~~l~~  248 (329)
T cd08298         183 ALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDD---L----------PPEPLDAAIIFAPVGALVPAALRAVKK  248 (329)
T ss_pred             HHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCc---c----------CCCcccEEEEcCCcHHHHHHHHHHhhc
Confidence            9999999999 9999999999999999999988887764   1          234799999987766688999999999


Q ss_pred             CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822          246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ  325 (335)
Q Consensus       246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~  325 (335)
                      + |+++.+|........++... +.++..+.++...   ..+.+..++++++++.+++   .++.|+++++++|++.+.+
T Consensus       249 ~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~  320 (329)
T cd08298         249 G-GRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANL---TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKE  320 (329)
T ss_pred             C-CEEEEEcCCCCCCCccchhh-hhCceEEEEecCC---CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHc
Confidence            7 99999885432122233333 3466677665422   2356788889999998765   2578999999999999988


Q ss_pred             CCee-eEE
Q 019822          326 PDCV-KVL  332 (335)
Q Consensus       326 ~~~~-k~v  332 (335)
                      ++.. |++
T Consensus       321 ~~~~~~~v  328 (329)
T cd08298         321 GRIRGAAV  328 (329)
T ss_pred             CCCcceee
Confidence            7665 765

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=1.4e-31  Score=247.17  Aligned_cols=259  Identities=21%  Similarity=0.244  Sum_probs=201.9

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      ++|.++| ||+ +|+|+++|++++.|++||+|+..                           +                 
T Consensus        67 ~~~~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~---------------------------~-----------------  100 (345)
T cd08293          67 PWQLSQV-LDG-GGVGVVEESKHQKFAVGDIVTSF---------------------------N-----------------  100 (345)
T ss_pred             CccCCCc-eEe-eEEEEEeccCCCCCCCCCEEEec---------------------------C-----------------
Confidence            4678999 999 99999999999999999999642                           0                 


Q ss_pred             cccccccceeeEEecccceEEcCCCCCccc----ccccccchhhhhHHHHHhcCCCCC--CEEEEEcC-CHHHHHHHHHH
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSD----ASFLSCGFTTGYGAAWKEAKVEKG--SSVAVLGL-GTVGLGAVDGA  170 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~~--~~VlI~G~-g~vG~~ai~la  170 (335)
                           ++|+||+.++++.++++|+++++.+    +++++.++.|||+++.+.++++++  ++|||+|+ |++|++++|+|
T Consensus       101 -----~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlA  175 (345)
T cd08293         101 -----WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIG  175 (345)
T ss_pred             -----CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHH
Confidence                 1799999999999999999865433    445667899999998887888876  99999987 99999999999


Q ss_pred             HHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeE
Q 019822          171 RMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGK  249 (335)
Q Consensus       171 ~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~  249 (335)
                      +++|+.+|+++++++++.+.+++ +|+++++++++   .++.+.++++++ +++|++||++|+. .+..++++++++ |+
T Consensus       176 k~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~~~-~gvd~vid~~g~~-~~~~~~~~l~~~-G~  249 (345)
T cd08293         176 RLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT---DNVAERLRELCP-EGVDVYFDNVGGE-ISDTVISQMNEN-SH  249 (345)
T ss_pred             HHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC---CCHHHHHHHHCC-CCceEEEECCCcH-HHHHHHHHhccC-CE
Confidence            99998679999999999999876 99999999887   778888888876 5999999999987 579999999998 99


Q ss_pred             EEEEccCCC--ccc----cch--hHHHh-hcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822          250 VIVIGVGVD--AMV----PLN--VIALA-CGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK  318 (335)
Q Consensus       250 ~v~~g~~~~--~~~----~~~--~~~~~-~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e  318 (335)
                      ++.+|....  ...    .+.  ...+. .+++.+.........  ..+.+..++++++++++++.  ....++++++++
T Consensus       250 iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~  327 (345)
T cd08293         250 IILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGE  327 (345)
T ss_pred             EEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHH
Confidence            999985322  111    111  11111 233443333211111  11335677889999998765  344569999999


Q ss_pred             HHHHhcCCCee-eEEEeC
Q 019822          319 AIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       319 a~~~~~~~~~~-k~vi~~  335 (335)
                      |++.+.+++.. |+++++
T Consensus       328 A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         328 AFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHhcCCCCCeEEEEC
Confidence            99999887754 999874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=8.5e-32  Score=247.91  Aligned_cols=271  Identities=20%  Similarity=0.218  Sum_probs=214.1

Q ss_pred             EEeEeecCCCC-CCccccccccccc-eEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVS-GKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.+.|.++. ..+|.++| ++.- .|++..+|+.++.|++||+|+..                               
T Consensus        53 d~~~~~g~~~~~~~~p~~~g-~~~~g~~~~~~v~~~v~~~~vGd~V~~~-------------------------------  100 (338)
T cd08295          53 MRGRMKGHDDSLYLPPFKPG-EVITGYGVAKVVDSGNPDFKVGDLVWGF-------------------------------  100 (338)
T ss_pred             HHHhhccCCccccCCCcCCC-CeEeccEEEEEEecCCCCCCCCCEEEec-------------------------------
Confidence            45555664433 34577888 8540 45556678888899999999521                               


Q ss_pred             CCCccccccCceeecccccccceeeEEecc-cceEEcC-CCCCcc-cccccccchhhhhHHHHHhcCCCCCCEEEEEcC-
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDA-NYVVKVD-PSIDPS-DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-  159 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~lp-~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-  159 (335)
                                         |+|+||+.+|+ ..++++| +++++. +++++++++.|||+++.+..+++++++|||+|+ 
T Consensus       101 -------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~  161 (338)
T cd08295         101 -------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAAS  161 (338)
T ss_pred             -------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCc
Confidence                               27999999999 8999995 678876 788899999999999888889999999999987 


Q ss_pred             CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHH
Q 019822          160 GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSE  238 (335)
Q Consensus       160 g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~  238 (335)
                      |++|.+++|+|+.+|+ +|+++++++++.+.+++ +|+++++++.+  ..++.+.+++.++ .++|++||++|+. .+..
T Consensus       162 G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~-~gvd~v~d~~g~~-~~~~  236 (338)
T cd08295         162 GAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE--EPDLDAALKRYFP-NGIDIYFDNVGGK-MLDA  236 (338)
T ss_pred             cHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC--cccHHHHHHHhCC-CCcEEEEECCCHH-HHHH
Confidence            9999999999999999 89999999999999988 99999998653  1367777887776 5899999999985 7899


Q ss_pred             HHHhhccCCeEEEEEccCCCccc-----cchhHHHhhcCcEEEEeeccCCCC--cCcHHHHHHHHhCCCCCCCCceeEEe
Q 019822          239 ALETTKVGKGKVIVIGVGVDAMV-----PLNVIALACGGRTLKGTTFGGIKT--KSDLPTLLDKCKNKEFKLHQLLTHHV  311 (335)
Q Consensus       239 ~~~~l~~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~  311 (335)
                      ++++++++ |+++.+|.......     ..+...+.++++++.++.......  ...+.++++++.++++++.  +...|
T Consensus       237 ~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~  313 (338)
T cd08295         237 VLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIAD  313 (338)
T ss_pred             HHHHhccC-cEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eeccc
Confidence            99999997 99999986543111     123455666888888765433211  2346778899999998765  44569


Q ss_pred             echhHHHHHHHhcCCCee-eEEEeC
Q 019822          312 KLEEIDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       312 ~l~~~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      +++++++|++.+.+++.. |+++++
T Consensus       314 ~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         314 GLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             CHHHHHHHHHHHhcCCCCceEEEEC
Confidence            999999999999887765 998864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.7e-31  Score=244.54  Aligned_cols=261  Identities=19%  Similarity=0.198  Sum_probs=208.3

Q ss_pred             ecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCcccc
Q 019822           11 ALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS   90 (335)
Q Consensus        11 ~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~   90 (335)
                      .|.++....|.++| +|+ +|+|+++|+   .|++||+|+..                                      
T Consensus        49 ~g~~~~~~~~~i~G-~~~-~g~v~~~~~---~~~~GdrV~~~--------------------------------------   85 (325)
T TIGR02825        49 VAAKRLKEGDTMMG-QQV-ARVVESKNV---ALPKGTIVLAS--------------------------------------   85 (325)
T ss_pred             cccCcCCCCCcEec-ceE-EEEEEeCCC---CCCCCCEEEEe--------------------------------------
Confidence            34444334578999 999 999999874   59999999632                                      


Q ss_pred             ccCceeecccccccceeeEEecccceEEc----CCCCCcccc-cccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822           91 VRGQKLYHIFSCSTWSEYMVIDANYVVKV----DPSIDPSDA-SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL  164 (335)
Q Consensus        91 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~l----p~~~~~~~a-a~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~  164 (335)
                                  ++|++|+.++.+++.++    |++++++++ +++++++.|||+++.+.++++++++|||+|+ |++|+
T Consensus        86 ------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~  153 (325)
T TIGR02825        86 ------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGS  153 (325)
T ss_pred             ------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHH
Confidence                        16889999999988888    899999987 6788899999999988899999999999986 99999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+|+..|+ +|+++++++++.+.++++|+++++++++  ..++.+.+++.++ +++|++||++|++ .+..++++++
T Consensus       154 ~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~~~~~~~~~-~gvdvv~d~~G~~-~~~~~~~~l~  228 (325)
T TIGR02825       154 VVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLEETLKKASP-DGYDCYFDNVGGE-FSNTVIGQMK  228 (325)
T ss_pred             HHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHHHHHHHhCC-CCeEEEEECCCHH-HHHHHHHHhC
Confidence            99999999999 9999999999999999999999999875  1245555666554 4899999999987 6799999999


Q ss_pred             cCCeEEEEEccCCCc----ccc--chhHHHhhcCcEEEEeeccCCC---CcCcHHHHHHHHhCCCCCCCCceeEEeechh
Q 019822          245 VGKGKVIVIGVGVDA----MVP--LNVIALACGGRTLKGTTFGGIK---TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE  315 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~----~~~--~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~  315 (335)
                      ++ |+++.+|...+.    ..+  .....+..+++++.++....+.   ..+.+.+++++++++++++.  +...|+|++
T Consensus       229 ~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~  305 (325)
T TIGR02825       229 KF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFEN  305 (325)
T ss_pred             cC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHH
Confidence            98 999999865420    111  1233455678888876543221   12357789999999998765  345689999


Q ss_pred             HHHHHHHhcCCCee-eEEEe
Q 019822          316 IDKAIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       316 ~~ea~~~~~~~~~~-k~vi~  334 (335)
                      +++|++.+.+++.. |+|++
T Consensus       306 ~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       306 MPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HHHHHHHHhcCCCCCeEEeC
Confidence            99999999887765 88763

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-31  Score=241.86  Aligned_cols=259  Identities=22%  Similarity=0.362  Sum_probs=216.7

Q ss_pred             EeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822            9 SFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLDSTS   87 (335)
Q Consensus         9 ~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~   87 (335)
                      ...|.+.....|.++| +|+ +|+|+++|++++.|++||+|+..+. ..|+.|++|..+..+.|.+...  +|...+   
T Consensus        45 ~~~g~~~~~~~p~~~G-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---  117 (306)
T cd08258          45 IYKGDYDPVETPVVLG-HEF-SGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG--IGTQAD---  117 (306)
T ss_pred             HHcCCCCcCCCCeeec-cce-EEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCce--eeecCC---
Confidence            3344443334578999 999 9999999999999999999998774 6899999999999999986422  233223   


Q ss_pred             cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHH
Q 019822           88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAV  167 (335)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai  167 (335)
                                     |+|++|+.+++..++++|+++++++++ +...+.++|+++.....+.++++|||.|+|.+|.+++
T Consensus       118 ---------------g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~  181 (306)
T cd08258         118 ---------------GGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAA  181 (306)
T ss_pred             ---------------CceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHH
Confidence                           389999999999999999999999887 6668889999998888999999999988899999999


Q ss_pred             HHHHHcCCCEEEEEc--CChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          168 DGARMHGAAKIIGID--KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       168 ~la~~~G~~~V~~~~--~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++|+.+|+ +|+++.  +++++.+.++++|++++ +++.   .++...+.+++.++++|+++|++|+...+...++++++
T Consensus       182 ~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~  256 (306)
T cd08258         182 QVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRK  256 (306)
T ss_pred             HHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhc
Confidence            99999999 787763  34567788899999888 7776   77888888888777999999999876688899999999


Q ss_pred             CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCC
Q 019822          246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK  299 (335)
Q Consensus       246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~  299 (335)
                      + |+++.+|........+++..++++++++.|+..++   +++++++++++++|
T Consensus       257 ~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~~  306 (306)
T cd08258         257 G-GRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST---PASWETALRLLASG  306 (306)
T ss_pred             C-CEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc---hHhHHHHHHHHhcC
Confidence            7 99999998754346677788888999999988654   57899999998875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.7e-30  Score=238.37  Aligned_cols=288  Identities=24%  Similarity=0.315  Sum_probs=231.7

Q ss_pred             eecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCcc
Q 019822           10 FALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR   88 (335)
Q Consensus        10 ~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~   88 (335)
                      ..|.++. ..+|.++| ||+ +|+|+++|++++.|++||+|+......|+.|.+|      .|.....  +|...+    
T Consensus        47 ~~g~~~~~~~~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~------~~~~~~~--~~~~~~----  112 (336)
T cd08276          47 LNGRYPPPVKDPLIPL-SDG-AGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPT------AEDEASA--LGGPID----  112 (336)
T ss_pred             hcCCCCCCCCCCcccc-cce-eEEEEEeCCCCcCCCCCCEEEEeccccccccccc------ccccccc--cccccC----
Confidence            3444443 34678899 999 9999999999999999999998776666554433      3322111  232223    


Q ss_pred             ccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHH
Q 019822           89 MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVD  168 (335)
Q Consensus        89 ~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~  168 (335)
                                    |++++|+.++.+.++++|+++++.+++.+++.+.+||+++.+...+.++++|+|+|+|++|+++++
T Consensus       113 --------------g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~  178 (336)
T cd08276         113 --------------GVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQ  178 (336)
T ss_pred             --------------ceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHH
Confidence                          389999999999999999999999999999999999999877788999999999988999999999


Q ss_pred             HHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCe
Q 019822          169 GARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG  248 (335)
Q Consensus       169 la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G  248 (335)
                      ++++.|+ +|+++++++++.+.++++|++.+++.+.  ..++...+++.++++++|+++|+++.. .+..++++++++ |
T Consensus       179 ~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-G  253 (336)
T cd08276         179 FAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT--TPDWGEEVLKLTGGRGVDHVVEVGGPG-TLAQSIKAVAPG-G  253 (336)
T ss_pred             HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc--ccCHHHHHHHHcCCCCCcEEEECCChH-HHHHHHHhhcCC-C
Confidence            9999999 8999999999999998899988888653  134777788888878999999999865 778999999998 9


Q ss_pred             EEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCe
Q 019822          249 KVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC  328 (335)
Q Consensus       249 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~  328 (335)
                      +++.+|.............++.+++++.+...+.   ...+.++++++.++.+.+.  .++.+++++++++++.+.+++.
T Consensus       254 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~  328 (336)
T cd08276         254 VISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSH  328 (336)
T ss_pred             EEEEEccCCCCccCcCHHHHhhcceEEEEEecCc---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCC
Confidence            9999987654223445556667999999887543   4568888999988876543  5578999999999999887766


Q ss_pred             e-eEEEeC
Q 019822          329 V-KVLITI  335 (335)
Q Consensus       329 ~-k~vi~~  335 (335)
                      . |+++++
T Consensus       329 ~~kvv~~~  336 (336)
T cd08276         329 FGKVVIRV  336 (336)
T ss_pred             CceEEEeC
Confidence            4 888763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=99.98  E-value=1.6e-30  Score=237.64  Aligned_cols=262  Identities=20%  Similarity=0.185  Sum_probs=218.1

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+++|+++..+++||+|+....                           ..+             
T Consensus        58 ~~p~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~---------------------------~~~-------------   95 (324)
T cd08244          58 ELPYVPG-GEV-AGVVDAVGPGVDPAWLGRRVVAHTG---------------------------RAG-------------   95 (324)
T ss_pred             CCCcCCc-cce-EEEEEEeCCCCCCCCCCCEEEEccC---------------------------CCC-------------
Confidence            4578899 999 9999999999999999999975421                           011             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA  176 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~  176 (335)
                           |+|++|+.++.+.++++|+++++++++.+++.+.||| ++.+...+.++++|+|+|+ |.+|.+++++|+.+|+ 
T Consensus        96 -----g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-  168 (324)
T cd08244          96 -----GGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-  168 (324)
T ss_pred             -----ceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-
Confidence                 3899999999999999999999999999999999995 5667888999999999985 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +|+++++++++.+.++++|++.++++++   .++...+.++++++++|+++|++|+. ....++++++.+ |+++.+|..
T Consensus       169 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~  243 (324)
T cd08244         169 TVVGAAGGPAKTALVRALGADVAVDYTR---PDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWA  243 (324)
T ss_pred             EEEEEeCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecC
Confidence            8999999999999999999988888876   67778888888888999999999987 568999999997 999999876


Q ss_pred             CCccccchhHHHhhcCcEEEEeeccCCC---CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEE
Q 019822          257 VDAMVPLNVIALACGGRTLKGTTFGGIK---TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVL  332 (335)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~v  332 (335)
                      .....+++...++.+++++.+.......   ..+.+..+++++.++++..  ++++.++++++++|++.+.+++.. |++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv  321 (324)
T cd08244         244 SGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVL  321 (324)
T ss_pred             CCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEE
Confidence            5433355545555688888877643321   1234667888998988654  366789999999999999887765 888


Q ss_pred             EeC
Q 019822          333 ITI  335 (335)
Q Consensus       333 i~~  335 (335)
                      +++
T Consensus       322 ~~~  324 (324)
T cd08244         322 LLP  324 (324)
T ss_pred             EeC
Confidence            764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.98  E-value=1.6e-30  Score=237.60  Aligned_cols=268  Identities=21%  Similarity=0.248  Sum_probs=222.2

Q ss_pred             eecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCcc
Q 019822           10 FALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR   88 (335)
Q Consensus        10 ~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~   88 (335)
                      +.|.++. ..+|.++| ||+ +|+|+++|++++.+++||+|+..+.                             +    
T Consensus        46 ~~~~~~~~~~~~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~-----------------------------~----   90 (323)
T cd05282          46 ISGAYGSRPPLPAVPG-NEG-VGVVVEVGSGVSGLLVGQRVLPLGG-----------------------------E----   90 (323)
T ss_pred             hcCcCCCCCCCCCcCC-cce-EEEEEEeCCCCCCCCCCCEEEEeCC-----------------------------C----
Confidence            3444432 34578999 999 9999999999999999999975421                             1    


Q ss_pred             ccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHH
Q 019822           89 MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAV  167 (335)
Q Consensus        89 ~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai  167 (335)
                                    |+|++|+.++...++++|+++++.+++.+++.+.+||+++.+...+.++++|||+|+ |.+|++++
T Consensus        91 --------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~  156 (323)
T cd05282          91 --------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLI  156 (323)
T ss_pred             --------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHH
Confidence                          389999999999999999999999999988899999999888788899999999987 99999999


Q ss_pred             HHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCC
Q 019822          168 DGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK  247 (335)
Q Consensus       168 ~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~  247 (335)
                      ++|+.+|+ +|+++.+++++.+.++++|++++++++.   .++...+.++++++++|+++|++|+. .....+++++++ 
T Consensus       157 ~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-  230 (323)
T cd05282         157 QLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVKEATGGAGARLALDAVGGE-SATRLARSLRPG-  230 (323)
T ss_pred             HHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHHHHhcCCCceEEEECCCCH-HHHHHHHhhCCC-
Confidence            99999999 8999999999999999999999999886   67888888888888999999999987 567889999997 


Q ss_pred             eEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC-------cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822          248 GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI  320 (335)
Q Consensus       248 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~  320 (335)
                      |+++.+|........++...+..+++++.+.....+..       .+.+..+++++.++.+.+.  .++.++++++++||
T Consensus       231 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~  308 (323)
T cd05282         231 GTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAV  308 (323)
T ss_pred             CEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHHHHHHHH
Confidence            99999987654334455555555889999877554321       1346778889999987643  56789999999999


Q ss_pred             HHhcCCCee-eEEEe
Q 019822          321 QLLKQPDCV-KVLIT  334 (335)
Q Consensus       321 ~~~~~~~~~-k~vi~  334 (335)
                      +.+.+++.. |++++
T Consensus       309 ~~~~~~~~~~kvv~~  323 (323)
T cd05282         309 AAAEQPGRGGKVLLT  323 (323)
T ss_pred             HHHhcCCCCceEeeC
Confidence            999887655 77763

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=1.3e-30  Score=231.61  Aligned_cols=255  Identities=29%  Similarity=0.390  Sum_probs=209.1

Q ss_pred             EEeEeecCCC-CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDS-QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~-~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++ ...+|.++| ||+ +|+|+++|++++.|++||+|+..+...|+.|++|+.    .|.....  .+....
T Consensus        15 d~~~~~g~~~~~~~~~~~~G-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~   86 (271)
T cd05188          15 DLHIRRGGYPPPPKLPLILG-HEG-AGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGGGI--LGEGLD   86 (271)
T ss_pred             hHHHHcCCCCcCCCCCcccc-ccc-EEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCCCE--eccccC
Confidence            4555566654 345688999 999 999999999999999999999999999999999997    6765544  233333


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      |                  ++++|+.++.+.++++|+++++++++.+++++.+||+++.....+.++++|||+|+|++|+
T Consensus        87 g------------------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~  148 (271)
T cd05188          87 G------------------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL  148 (271)
T ss_pred             C------------------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence            3                  8999999999999999999999999999899999999987767778999999999855999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++++++..|. +|+++++++++.+.++++|++.+++...   .++...+. .+.+.++|+++|+++.......++++++
T Consensus       149 ~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~  223 (271)
T cd05188         149 LAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLR  223 (271)
T ss_pred             HHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcc
Confidence            99999999998 9999999999999999999988888776   56666666 5566689999999998447889999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHH
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDK  295 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  295 (335)
                      ++ |+++.++..............+.+++++.++....   ..+++.++++
T Consensus       224 ~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  270 (271)
T cd05188         224 PG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT---REDFEEALDL  270 (271)
T ss_pred             cC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC---HHHHHHHHhh
Confidence            97 99999987664222222344566899999887543   3466666665

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=99.98  E-value=1.7e-30  Score=238.13  Aligned_cols=254  Identities=22%  Similarity=0.216  Sum_probs=206.5

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| +|+ +|+|++   .++.|++||+|+..                                             
T Consensus        58 ~~p~v~G-~e~-~G~V~~---~~~~~~~Gd~V~~~---------------------------------------------   87 (329)
T cd08294          58 EGDTMIG-TQV-AKVIES---KNSKFPVGTIVVAS---------------------------------------------   87 (329)
T ss_pred             CCCcEec-ceE-EEEEec---CCCCCCCCCEEEee---------------------------------------------
Confidence            4688999 999 999985   44679999999631                                             


Q ss_pred             cccccccceeeEEeccc---ceEEcCCCCC--c---ccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHH
Q 019822           98 HIFSCSTWSEYMVIDAN---YVVKVDPSID--P---SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVD  168 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~---~~~~lp~~~~--~---~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~  168 (335)
                           ++|++|+.++++   .++++|++++  +   ..+++++++++|||+++.+..++.++++|||+|+ |++|.+++|
T Consensus        88 -----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiq  162 (329)
T cd08294          88 -----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQ  162 (329)
T ss_pred             -----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHH
Confidence                 168899999999   9999999988  2   2234577899999999988899999999999985 999999999


Q ss_pred             HHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCe
Q 019822          169 GARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG  248 (335)
Q Consensus       169 la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G  248 (335)
                      +|+.+|+ +|+++++++++.++++++|+++++++++   .++.+.++++++ +++|++||++|+. .+..++++++++ |
T Consensus       163 lA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~---~~~~~~v~~~~~-~gvd~vld~~g~~-~~~~~~~~l~~~-G  235 (329)
T cd08294         163 IAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT---VSLEEALKEAAP-DGIDCYFDNVGGE-FSSTVLSHMNDF-G  235 (329)
T ss_pred             HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHCC-CCcEEEEECCCHH-HHHHHHHhhccC-C
Confidence            9999999 8999999999999999999999999987   778888888776 5899999999985 789999999997 9


Q ss_pred             EEEEEccCCC-cc-----ccchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822          249 KVIVIGVGVD-AM-----VPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI  320 (335)
Q Consensus       249 ~~v~~g~~~~-~~-----~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~  320 (335)
                      +++.+|.... ..     .......++.+++++.++......  ..+.+..++++++++++++.  ....++++++++|+
T Consensus       236 ~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~  313 (329)
T cd08294         236 RVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAF  313 (329)
T ss_pred             EEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHH
Confidence            9999985432 11     122234456688888887643321  12336678899999998765  33468999999999


Q ss_pred             HHhcCCCee-eEEEeC
Q 019822          321 QLLKQPDCV-KVLITI  335 (335)
Q Consensus       321 ~~~~~~~~~-k~vi~~  335 (335)
                      +.+.+++.. |+++++
T Consensus       314 ~~~~~~~~~gkvvv~~  329 (329)
T cd08294         314 IGMLKGENTGKAIVKV  329 (329)
T ss_pred             HHHHcCCCCCeEEEeC
Confidence            999887765 998874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=7e-30  Score=232.16  Aligned_cols=271  Identities=23%  Similarity=0.268  Sum_probs=217.5

Q ss_pred             EEeEe-ecCCCC--CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc
Q 019822            6 TLISF-ALKDSQ--RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM   82 (335)
Q Consensus         6 d~~~~-~g~~~~--~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~   82 (335)
                      |++.+ .|..+.  +.+|.++| ||+ +|+|+++|++++.+++||+|+...                             
T Consensus        35 d~~~~~~g~~~~~~~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~-----------------------------   83 (312)
T cd08269          35 DLPAFNQGRPWFVYPAEPGGPG-HEG-WGRVVALGPGVRGLAVGDRVAGLS-----------------------------   83 (312)
T ss_pred             chHHHccCCCCcccCCCCcccc-eee-EEEEEEECCCCcCCCCCCEEEEec-----------------------------
Confidence            44444 554432  23478999 999 999999999999999999997531                             


Q ss_pred             cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                                         .|+|++|+.++++.++++|+++  ..++....+++++++++. ..++.++++|||+|+|.+
T Consensus        84 -------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~v  141 (312)
T cd08269          84 -------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFI  141 (312)
T ss_pred             -------------------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHH
Confidence                               1389999999999999999998  233322267889998875 788999999999988999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |.+++++|+.+|+++|+++.+++++.++++++|++++++++.   .++...++++++++++|+++||+|+...+...+++
T Consensus       142 g~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~  218 (312)
T cd08269         142 GLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGEL  218 (312)
T ss_pred             HHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHH
Confidence            999999999999933999999999999999999998988776   67888888888888999999999877678999999


Q ss_pred             hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCC-CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK-TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      ++++ |+++.+|.......++++..+..+++.+.+....... ..+.++.++++++++.+.+..++++.++++++++|++
T Consensus       219 l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~  297 (312)
T cd08269         219 VAER-GRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFE  297 (312)
T ss_pred             hccC-CEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHH
Confidence            9997 9999998654333445555666688888776533321 2356888999999999876555667899999999999


Q ss_pred             HhcCCCe--eeEEE
Q 019822          322 LLKQPDC--VKVLI  333 (335)
Q Consensus       322 ~~~~~~~--~k~vi  333 (335)
                      .+.+++.  +|+++
T Consensus       298 ~~~~~~~~~~~~~~  311 (312)
T cd08269         298 AARRRPDGFIKGVI  311 (312)
T ss_pred             HHHhCCCCceEEEe
Confidence            9988764  58876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=99.97  E-value=1.8e-30  Score=237.81  Aligned_cols=275  Identities=21%  Similarity=0.194  Sum_probs=217.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++...|.++...+|.++| ||+ +|+|+.+|++++.+++||+|+....                               
T Consensus        44 d~~~~~g~~~~~~~~~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~-------------------------------   90 (327)
T PRK10754         44 DTYIRSGLYPPPSLPSGLG-TEA-AGVVSKVGSGVKHIKVGDRVVYAQS-------------------------------   90 (327)
T ss_pred             HhhhcCCCCCCCCCCCccC-cce-EEEEEEeCCCCCCCCCCCEEEECCC-------------------------------
Confidence            4455566666555788999 999 9999999999999999999963210                               


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL  164 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~  164 (335)
                                     +.|+|++|+.++.+.++++|+++++++++.+++.+.+||.++.....+.++++|+|+|+ |.+|+
T Consensus        91 ---------------~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~  155 (327)
T PRK10754         91 ---------------ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGL  155 (327)
T ss_pred             ---------------CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHH
Confidence                           01389999999999999999999999999888899999998877788999999999975 99999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++++|+.+|+ +|+++++++++.+.++++|++++++.+.   .++.+.++++++++++|+++||+++. .+...+++++
T Consensus       156 ~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~  230 (327)
T PRK10754        156 IACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYRE---ENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQ  230 (327)
T ss_pred             HHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCC---CcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhc
Confidence            99999999999 8999999999999999999988998876   67888889988888999999999986 7788999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEE-E-EeeccCCCCc----CcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTL-K-GTTFGGIKTK----SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK  318 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~-g~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e  318 (335)
                      ++ |+++.+|........++...+..++..+ . ....+.....    ..+..+++++.++.+++..+.++.++++++++
T Consensus       231 ~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~  309 (327)
T PRK10754        231 RR-GLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQR  309 (327)
T ss_pred             cC-CEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHH
Confidence            97 9999998765322223333332222111 1 1100111111    12445788999999876555568899999999


Q ss_pred             HHHHhcCCCee-eEEEe
Q 019822          319 AIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       319 a~~~~~~~~~~-k~vi~  334 (335)
                      +++.+.+++.. |+|+.
T Consensus       310 a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        310 AHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHHHHcCCCcceEEEe
Confidence            99999887754 99886

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=99.97  E-value=3.4e-30  Score=237.43  Aligned_cols=260  Identities=24%  Similarity=0.267  Sum_probs=214.3

Q ss_pred             ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeec
Q 019822           19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH   98 (335)
Q Consensus        19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~   98 (335)
                      +|.++| ||+ +|+|+++|+++..|++||+|+....                            .               
T Consensus        63 ~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~~----------------------------~---------------   97 (341)
T cd08290          63 PPAVGG-NEG-VGEVVKVGSGVKSLKPGDWVIPLRP----------------------------G---------------   97 (341)
T ss_pred             CCCCCC-cce-EEEEEEeCCCCCCCCCCCEEEecCC----------------------------C---------------
Confidence            677999 999 9999999999999999999975321                            0               


Q ss_pred             ccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822           99 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK  177 (335)
Q Consensus        99 ~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~  177 (335)
                         .|+|++|+.++.+.++++|+++++++++++++.+.|||+++.....+.++++|||+|+ |++|++++++|++.|+ +
T Consensus        98 ---~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~  173 (341)
T cd08290          98 ---LGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-K  173 (341)
T ss_pred             ---CccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-e
Confidence               1389999999999999999999999999999999999999877788999999999986 9999999999999999 8


Q ss_pred             EEEEcCCh----hhHHHHHhcCCceEeCCCCCCch---hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEE
Q 019822          178 IIGIDKNP----WKKEKGKAFGMTDFINPDDEPNK---SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKV  250 (335)
Q Consensus       178 V~~~~~~~----~~~~~~~~lga~~v~~~~~~~~~---~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~  250 (335)
                      |+++++++    ++.+.++++|++++++++.   .   ++...++.++++ ++|+++||+|+. .+...+++++++ |++
T Consensus       174 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~-~~d~vld~~g~~-~~~~~~~~l~~~-G~~  247 (341)
T cd08290         174 TINVVRDRPDLEELKERLKALGADHVLTEEE---LRSLLATELLKSAPGG-RPKLALNCVGGK-SATELARLLSPG-GTM  247 (341)
T ss_pred             EEEEEcCCCcchhHHHHHHhcCCCEEEeCcc---cccccHHHHHHHHcCC-CceEEEECcCcH-hHHHHHHHhCCC-CEE
Confidence            88887765    6788888999999998875   4   677788887777 899999999987 567899999997 999


Q ss_pred             EEEccCCCccccchhHHHhhcCcEEEEeeccCCCC-------cCcHHHHHHHHhCCCCCCCCceeEEe---echhHHHHH
Q 019822          251 IVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPTLLDKCKNKEFKLHQLLTHHV---KLEEIDKAI  320 (335)
Q Consensus       251 v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~---~l~~~~ea~  320 (335)
                      +.++........++...++.+++++.+.....+..       ...+..+++++.++.+.+.  ..+.+   +++++++|+
T Consensus       248 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~  325 (341)
T cd08290         248 VTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDAL  325 (341)
T ss_pred             EEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHH
Confidence            99986543334455545566899999876543210       1247778899999987654  33456   999999999


Q ss_pred             HHhcCCCee-eEEEeC
Q 019822          321 QLLKQPDCV-KVLITI  335 (335)
Q Consensus       321 ~~~~~~~~~-k~vi~~  335 (335)
                      +.+.+++.. |+++++
T Consensus       326 ~~~~~~~~~~k~v~~~  341 (341)
T cd08290         326 ANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHhhcCCCCeEEEeC
Confidence            999877665 998875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-30  Score=234.46  Aligned_cols=260  Identities=27%  Similarity=0.298  Sum_probs=214.2

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+++|+++..+++||+|+..                             ..+             
T Consensus        57 ~~~~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~-----------------------------~~~-------------   92 (334)
T PTZ00354         57 GSSEILG-LEV-AGYVEDVGSDVKRFKEGDRVMAL-----------------------------LPG-------------   92 (334)
T ss_pred             CCCcccc-eee-EEEEEEeCCCCCCCCCCCEEEEe-----------------------------cCC-------------
Confidence            4567899 999 99999999999999999999632                             112             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA  176 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~  176 (335)
                           |++++|++++++.++++|+++++.+++.+++++.+||+++.+...+.++++|||+|+ |.+|++++++|+.+|+ 
T Consensus        93 -----g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-  166 (334)
T PTZ00354         93 -----GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-  166 (334)
T ss_pred             -----CceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-
Confidence                 289999999999999999999999999999999999999877788999999999986 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCchh-HHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS-ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~-~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      +++.+.+++++.+.++++|++++++++.   .+ +...+++.++++++|+++|++++. .+..++++++++ |+++.++.
T Consensus       167 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~i~~~~  241 (334)
T PTZ00354        167 ATIITTSSEEKVDFCKKLAAIILIRYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAVD-GKWIVYGF  241 (334)
T ss_pred             EEEEEeCCHHHHHHHHHcCCcEEEecCC---hhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhccC-CeEEEEec
Confidence            7777888999999999999988888765   44 777888888778999999999876 789999999997 99999986


Q ss_pred             CCCcccc-chhHHHhhcCcEEEEeeccCCCCc-------CcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCC
Q 019822          256 GVDAMVP-LNVIALACGGRTLKGTTFGGIKTK-------SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD  327 (335)
Q Consensus       256 ~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~  327 (335)
                      ..+.... ++...+..++.++.++........       ..+..+++++.++.+.+.  +++.+++++++++++.+.+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~  319 (334)
T PTZ00354        242 MGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLEEVAEAHTFLEQNK  319 (334)
T ss_pred             CCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHhCC
Confidence            5432322 555556667778888764431110       224667788888886643  567899999999999988766


Q ss_pred             ee-eEEEe
Q 019822          328 CV-KVLIT  334 (335)
Q Consensus       328 ~~-k~vi~  334 (335)
                      .. |++++
T Consensus       320 ~~~kvvv~  327 (334)
T PTZ00354        320 NIGKVVLT  327 (334)
T ss_pred             CCceEEEe
Confidence            54 88875

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=99.97  E-value=1.1e-29  Score=233.54  Aligned_cols=268  Identities=17%  Similarity=0.180  Sum_probs=208.2

Q ss_pred             eEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822            8 ISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS   87 (335)
Q Consensus         8 ~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~   87 (335)
                      +.+.|..+...+|.++| ||+ +|+|+++|++++.|++||+|+...                          +....   
T Consensus        47 ~~~~g~~~~~~~~~~~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~~--------------------------~~~~~---   95 (336)
T TIGR02817        47 KVRARMAPEAGQPKILG-WDA-AGVVVAVGDEVTLFKPGDEVWYAG--------------------------DIDRP---   95 (336)
T ss_pred             HHHcCCCCCCCCCcccc-eee-EEEEEEeCCCCCCCCCCCEEEEcC--------------------------CCCCC---
Confidence            33445444445688999 999 999999999999999999997431                          01112   


Q ss_pred             cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCC-----CCEEEEEcC-CH
Q 019822           88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK-----GSSVAVLGL-GT  161 (335)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----~~~VlI~G~-g~  161 (335)
                                     |+|++|+.++++.++++|+++++++++.+++.+.|||+++....++.+     +++|||+|+ |.
T Consensus        96 ---------------g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~  160 (336)
T TIGR02817        96 ---------------GSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGG  160 (336)
T ss_pred             ---------------CcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcH
Confidence                           389999999999999999999999999999999999999888888877     999999986 99


Q ss_pred             HHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          162 VGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       162 vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      +|++++|+|+.+ |+ +|+++++++++.+.++++|+++++++..    ++...+++. .++++|+++|++++...+...+
T Consensus       161 vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~----~~~~~i~~~-~~~~vd~vl~~~~~~~~~~~~~  234 (336)
T TIGR02817       161 VGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK----PLKAQLEKL-GLEAVSYVFSLTHTDQHFKEIV  234 (336)
T ss_pred             HHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC----CHHHHHHHh-cCCCCCEEEEcCCcHHHHHHHH
Confidence            999999999998 99 9999999999999999999999987653    466677764 4458999999987666789999


Q ss_pred             HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeecc-CC--CC------cCcHHHHHHHHhCCCCCCCCceeEEe
Q 019822          241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG-GI--KT------KSDLPTLLDKCKNKEFKLHQLLTHHV  311 (335)
Q Consensus       241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~--~~------~~~~~~~~~~i~~~~~~~~~~~~~~~  311 (335)
                      ++++++ |+++.++..    ..++...+..+++.+.+.... ..  ..      ...+.++++++.++.+++.  +++.+
T Consensus       235 ~~l~~~-G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~  307 (336)
T TIGR02817       235 ELLAPQ-GRFALIDDP----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETF  307 (336)
T ss_pred             HHhccC-CEEEEEccc----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhcc
Confidence            999997 999988532    233344444455666653322 11  00      1346778899999987643  33344


Q ss_pred             ---echhHHHHHHHhcCCCee-eEEEe
Q 019822          312 ---KLEEIDKAIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       312 ---~l~~~~ea~~~~~~~~~~-k~vi~  334 (335)
                         +++++++|++.+.+++.. |+++.
T Consensus       308 ~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       308 GTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             CCCCHHHHHHHHHHHHcCCccceEEEe
Confidence               479999999999887664 77764

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.97  E-value=2.9e-30  Score=235.07  Aligned_cols=224  Identities=26%  Similarity=0.345  Sum_probs=174.1

Q ss_pred             ccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhc------CCCCCCEEEEEcC-CHHHHHHHHHHHHcCC
Q 019822          103 STWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA------KVEKGSSVAVLGL-GTVGLGAVDGARMHGA  175 (335)
Q Consensus       103 g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~------~~~~~~~VlI~G~-g~vG~~ai~la~~~G~  175 (335)
                      |+|+||+.+|+..++++|+++++++||+++.++.|||.+++...      +++++++|||+|+ |++|++++|+|++.++
T Consensus       104 g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~  183 (347)
T KOG1198|consen  104 GGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA  183 (347)
T ss_pred             CceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC
Confidence            38999999999999999999999999999999999999999999      8999999999976 9999999999999995


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          176 AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       176 ~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                       ..++++.++++.++++++|+++++||++   .++.+.+++.+ +.+||+||||+|++ .......++... |+...++.
T Consensus       184 -~~v~t~~s~e~~~l~k~lGAd~vvdy~~---~~~~e~~kk~~-~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~  256 (347)
T KOG1198|consen  184 -IKVVTACSKEKLELVKKLGADEVVDYKD---ENVVELIKKYT-GKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGL  256 (347)
T ss_pred             -cEEEEEcccchHHHHHHcCCcEeecCCC---HHHHHHHHhhc-CCCccEEEECCCCC-ccccchhhhccC-CceEEEEe
Confidence             4455555899999999999999999998   99999999988 66999999999997 667788888886 76555554


Q ss_pred             CCCccccchhH----HH---hhcCcEEEEeeccC--C-CCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcC
Q 019822          256 GVDAMVPLNVI----AL---ACGGRTLKGTTFGG--I-KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ  325 (335)
Q Consensus       256 ~~~~~~~~~~~----~~---~~~~~~~~g~~~~~--~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~  325 (335)
                      ..+...+....    .+   ......+.+..+..  + ...+.+..+.++++++++++  .+.+.||++++.+|++.+.+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp--~i~~~~p~~~~~ea~~~~~~  334 (347)
T KOG1198|consen  257 VGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKP--VIDSVYPFSQAKEAFEKLEK  334 (347)
T ss_pred             ccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccC--CcceeeeHHHHHHHHHHHhh
Confidence            43311111111    00   00111111111110  1 12355778889999997554  48899999999999999988


Q ss_pred             CCe-eeEEEeC
Q 019822          326 PDC-VKVLITI  335 (335)
Q Consensus       326 ~~~-~k~vi~~  335 (335)
                      +.. .|+++.+
T Consensus       335 ~~~~GK~vl~~  345 (347)
T KOG1198|consen  335 SHATGKVVLEK  345 (347)
T ss_pred             cCCcceEEEEe
Confidence            655 4888763

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=4.2e-29  Score=227.53  Aligned_cols=269  Identities=20%  Similarity=0.310  Sum_probs=210.1

Q ss_pred             eEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822            8 ISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS   87 (335)
Q Consensus         8 ~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~   87 (335)
                      +...|.++....|.++| ||+ +|+|+++|.  ..+++||+|+.....                       ++...+   
T Consensus        45 ~~~~~~~~~~~~~~~~g-~e~-~G~v~~vG~--~~~~~Gd~V~~~~~~-----------------------~~~~~~---   94 (320)
T cd08243          45 FTRQGHSPSVKFPRVLG-IEA-VGEVEEAPG--GTFTPGQRVATAMGG-----------------------MGRTFD---   94 (320)
T ss_pred             HHhcCCCCCCCCCcccc-cee-EEEEEEecC--CCCCCCCEEEEecCC-----------------------CCCCCC---
Confidence            33445544445678999 999 999999995  579999999764210                       111112   


Q ss_pred             cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHH
Q 019822           88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGA  166 (335)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~a  166 (335)
                                     |+|++|+.+++..++++|+++++++++.+++++.|||+++.+...+.++++|||+|+ |.+|+++
T Consensus        95 ---------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~  159 (320)
T cd08243          95 ---------------GSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAA  159 (320)
T ss_pred             ---------------cccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHH
Confidence                           389999999999999999999999999999999999999888788999999999987 9999999


Q ss_pred             HHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccC
Q 019822          167 VDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG  246 (335)
Q Consensus       167 i~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~  246 (335)
                      +++|+.+|+ +|+++++++++.+.++++|++++++. .   .++...++++  ++++|+++|++++. .+...+++++++
T Consensus       160 ~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~---~~~~~~i~~~--~~~~d~vl~~~~~~-~~~~~~~~l~~~  231 (320)
T cd08243         160 LKLAKALGA-TVTATTRSPERAALLKELGADEVVID-D---GAIAEQLRAA--PGGFDKVLELVGTA-TLKDSLRHLRPG  231 (320)
T ss_pred             HHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-C---ccHHHHHHHh--CCCceEEEECCChH-HHHHHHHHhccC
Confidence            999999999 89999999999999999999888754 3   4567777777  55899999999986 789999999997


Q ss_pred             CeEEEEEccCCCc--cccchhHHHh--hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          247 KGKVIVIGVGVDA--MVPLNVIALA--CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       247 ~G~~v~~g~~~~~--~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                       |+++.+|...+.  ..........  .+++.+.+...... ....+..++++++++.+++.  .++.++++++++|++.
T Consensus       232 -g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~  307 (320)
T cd08243         232 -GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDV-PQTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAY  307 (320)
T ss_pred             -CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhh-hHHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHH
Confidence             999999875331  1111122222  46677766553221 12347778899999987653  5678999999999999


Q ss_pred             hcCCCee-eEEE
Q 019822          323 LKQPDCV-KVLI  333 (335)
Q Consensus       323 ~~~~~~~-k~vi  333 (335)
                      +.+++.. |+++
T Consensus       308 ~~~~~~~~kvvv  319 (320)
T cd08243         308 MESNRAFGKVVV  319 (320)
T ss_pred             HHhCCCCCcEEe
Confidence            9877654 7664

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.97  E-value=9.3e-29  Score=226.07  Aligned_cols=274  Identities=20%  Similarity=0.223  Sum_probs=206.6

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++  +++.|++||+|+.....                       .|+..+
T Consensus        43 d~~~~~g~~~~~~~~~~~~g-~e~-~G~v~~~--~~~~~~~Gd~V~~~~~~-----------------------~g~~~~   95 (325)
T cd05280          43 DALAATGNGGVTRNYPHTPG-IDA-AGTVVSS--DDPRFREGDEVLVTGYD-----------------------LGMNTD   95 (325)
T ss_pred             HHHHhcCCCCCCCCCCCccC-ccc-EEEEEEe--CCCCCCCCCEEEEcccc-----------------------cCCCCC
Confidence            44445565543 34578999 999 9999999  45679999999864210                       133233


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcC--CC-CCCEEEEEcC-C
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK--VE-KGSSVAVLGL-G  160 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~--~~-~~~~VlI~G~-g  160 (335)
                      |                  +|++|+.++++.++++|+++++++++.+++.+.++|+++.....  +. .+++|||+|+ |
T Consensus        96 g------------------~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g  157 (325)
T cd05280          96 G------------------GFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATG  157 (325)
T ss_pred             c------------------eeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCcc
Confidence            3                  89999999999999999999999999999999999998755433  35 3579999997 9


Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      .+|++++++|+.+|+ +|+++++++++++.++++|++++++++.   .  ...+.+...++++|+++|++++. .+...+
T Consensus       158 ~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~  230 (325)
T cd05280         158 GVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED---L--LDESKKPLLKARWAGAIDTVGGD-VLANLL  230 (325)
T ss_pred             HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh---H--HHHHHHHhcCCCccEEEECCchH-HHHHHH
Confidence            999999999999999 8999999999999999999999988764   2  12233334445899999999986 789999


Q ss_pred             HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      +++++. |+++.+|........++...++.+++++.+........   ...+..+.+++..+..   +.+.+++++++++
T Consensus       231 ~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  306 (325)
T cd05280         231 KQTKYG-GVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLL---EIVVREISLEELP  306 (325)
T ss_pred             HhhcCC-CEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCc---cceeeEecHHHHH
Confidence            999997 99999987654233455555546888888876543211   1122334444445522   2366799999999


Q ss_pred             HHHHHhcCCCee-eEEEeC
Q 019822          318 KAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       318 ea~~~~~~~~~~-k~vi~~  335 (335)
                      +|++.+.+++.. |+++++
T Consensus       307 ~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         307 EAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHHHHHhcCCcceEEEEeC
Confidence            999999887765 888864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=1.3e-28  Score=220.28  Aligned_cols=253  Identities=26%  Similarity=0.339  Sum_probs=202.1

Q ss_pred             ecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCcccc
Q 019822           11 ALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS   90 (335)
Q Consensus        11 ~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~   90 (335)
                      +|.+|.+ +|.++| ||+ +|+|+++|+++++|++||+|+..                                      
T Consensus        13 ~~~~~~~-~p~v~g-~e~-~G~V~~vG~~v~~~~~Gd~V~~~--------------------------------------   51 (277)
T cd08255          13 TGTEKLP-LPLPPG-YSS-VGRVVEVGSGVTGFKPGDRVFCF--------------------------------------   51 (277)
T ss_pred             ccCccCc-CCcccC-cce-eEEEEEeCCCCCCCCCCCEEEec--------------------------------------
Confidence            4777765 899999 999 99999999999999999999743                                      


Q ss_pred             ccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHH
Q 019822           91 VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGA  170 (335)
Q Consensus        91 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la  170 (335)
                                  +.+++|+.++.+.++++|+++++.+++.+ +.+.|||+++ ...++.+++++||+|+|.+|++++++|
T Consensus        52 ------------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a  117 (277)
T cd08255          52 ------------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLA  117 (277)
T ss_pred             ------------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence                        15899999999999999999999998888 7899999987 578899999999998899999999999


Q ss_pred             HHcCCCEEEEEcCChhhHHHHHhcC-CceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeE
Q 019822          171 RMHGAAKIIGIDKNPWKKEKGKAFG-MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGK  249 (335)
Q Consensus       171 ~~~G~~~V~~~~~~~~~~~~~~~lg-a~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~  249 (335)
                      +.+|+++|+++++++++.+.++++| ++.+++...           ..+.++++|++||+++....+...+++++++ |+
T Consensus       118 ~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~  185 (277)
T cd08255         118 KAAGAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GR  185 (277)
T ss_pred             HHcCCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cE
Confidence            9999933999999999999999999 555544332           1224558999999998766889999999997 99


Q ss_pred             EEEEccCCCccccchhHHHhhcCcEEEEeeccCCC---------CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHH
Q 019822          250 VIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK---------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI  320 (335)
Q Consensus       250 ~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~  320 (335)
                      ++.+|..... .......+..+.+++.+.......         ..+.+.++++++.++.+...  +.+.++++++++|+
T Consensus       186 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~  262 (277)
T cd08255         186 VVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEAL--ITHRVPFEDAPEAY  262 (277)
T ss_pred             EEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccc--ccCccCHHHHHHHH
Confidence            9999876532 111223344456677766543221         12567889999999985543  56789999999999


Q ss_pred             HHhcCC--CeeeEEE
Q 019822          321 QLLKQP--DCVKVLI  333 (335)
Q Consensus       321 ~~~~~~--~~~k~vi  333 (335)
                      +.+.++  ..+|+++
T Consensus       263 ~~~~~~~~~~~k~~~  277 (277)
T cd08255         263 RLLFEDPPECLKVVL  277 (277)
T ss_pred             HHHHcCCccceeeeC
Confidence            999877  3458764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=2.4e-28  Score=221.89  Aligned_cols=261  Identities=25%  Similarity=0.308  Sum_probs=215.1

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+.+|+++..+++||+|+...                             ..             
T Consensus        53 ~~~~~~g-~e~-~G~v~~~g~~~~~~~~G~~V~~~~-----------------------------~~-------------   88 (320)
T cd05286          53 PLPFVLG-VEG-AGVVEAVGPGVTGFKVGDRVAYAG-----------------------------PP-------------   88 (320)
T ss_pred             CCCccCC-cce-eEEEEEECCCCCCCCCCCEEEEec-----------------------------CC-------------
Confidence            3567899 999 999999999999999999997531                             01             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA  176 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~  176 (335)
                           |++++|+.++.+.++++|+++++.+++.++..+.++++++.+..++.++++|||+|+ |.+|++++++++.+|+ 
T Consensus        89 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-  162 (320)
T cd05286          89 -----GAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-  162 (320)
T ss_pred             -----CceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-
Confidence                 389999999999999999999999999888899999999888888999999999996 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +|+++++++++.+.++++|++++++...   .++...+++++.++++|+++||+++. ....++++++++ |+++.+|..
T Consensus       163 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~  237 (320)
T cd05286         163 TVIGTVSSEEKAELARAAGADHVINYRD---EDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPR-GTLVSFGNA  237 (320)
T ss_pred             EEEEEcCCHHHHHHHHHCCCCEEEeCCc---hhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccC-cEEEEEecC
Confidence            8999999999999999999999888776   67888888888777999999999986 788999999997 999999875


Q ss_pred             CCccccchhHHHhhcCcEEEEeeccCCC-Cc----CcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-e
Q 019822          257 VDAMVPLNVIALACGGRTLKGTTFGGIK-TK----SDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-K  330 (335)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~----~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k  330 (335)
                      ......++...+..+++.+.+.....+. ..    +.+..+++++.++.+.+.  .++.+++++++++++.+.+++.. |
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~  315 (320)
T cd05286         238 SGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGK  315 (320)
T ss_pred             CCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCce
Confidence            4322234444443578888765533321 11    224567888888887654  56789999999999999887765 8


Q ss_pred             EEEeC
Q 019822          331 VLITI  335 (335)
Q Consensus       331 ~vi~~  335 (335)
                      +++++
T Consensus       316 vv~~~  320 (320)
T cd05286         316 LLLIP  320 (320)
T ss_pred             EEEeC
Confidence            88753

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=99.97  E-value=1.3e-28  Score=225.78  Aligned_cols=266  Identities=22%  Similarity=0.214  Sum_probs=211.9

Q ss_pred             EeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822            9 SFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS   87 (335)
Q Consensus         9 ~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~   87 (335)
                      ...|.++. ..+|.++| ||+ +|+|+++|+++..+++||+|+...                                  
T Consensus        49 ~~~g~~~~~~~~p~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~----------------------------------   92 (329)
T cd08250          49 FTAGRYDPGVKPPFDCG-FEG-VGEVVAVGEGVTDFKVGDAVATMS----------------------------------   92 (329)
T ss_pred             HHhCCCCCCCCCCcccC-cee-EEEEEEECCCCCCCCCCCEEEEec----------------------------------
Confidence            33455543 45788999 999 999999999999999999997531                                  


Q ss_pred             cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHH
Q 019822           88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGA  166 (335)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~a  166 (335)
                                    .|+|++|+.++.+.++++|++  +.+++.++.++.|||+++.+..++.++++|+|+|+ |.+|+++
T Consensus        93 --------------~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~  156 (329)
T cd08250          93 --------------FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFA  156 (329)
T ss_pred             --------------CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHH
Confidence                          138999999999999999997  35677788899999999887788999999999986 9999999


Q ss_pred             HHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccC
Q 019822          167 VDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG  246 (335)
Q Consensus       167 i~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~  246 (335)
                      +++|+..|+ +|+++++++++.+.++++|++.+++.+.   .++...+.+..+ +++|+++|++|+. .+...+++++++
T Consensus       157 ~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~-~~vd~v~~~~g~~-~~~~~~~~l~~~  230 (329)
T cd08250         157 VQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKT---EDLGEVLKKEYP-KGVDVVYESVGGE-MFDTCVDNLALK  230 (329)
T ss_pred             HHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCC---ccHHHHHHHhcC-CCCeEEEECCcHH-HHHHHHHHhccC
Confidence            999999999 8999999999999999999988888776   566667766655 5899999999975 789999999997


Q ss_pred             CeEEEEEccCCCc----------cccchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeech
Q 019822          247 KGKVIVIGVGVDA----------MVPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLE  314 (335)
Q Consensus       247 ~G~~v~~g~~~~~----------~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~  314 (335)
                       |+++.+|.....          ...++. ..+.+++++.+.....+.  ..+.+..+++++.++.+.+....++.++++
T Consensus       231 -g~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  308 (329)
T cd08250         231 -GRLIVIGFISGYQSGTGPSPVKGATLPP-KLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLE  308 (329)
T ss_pred             -CeEEEEecccCCcccCcccccccccccH-HHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHH
Confidence             999999876431          012222 334578888887643221  123467788999999877643345568999


Q ss_pred             hHHHHHHHhcCCCee-eEEEe
Q 019822          315 EIDKAIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       315 ~~~ea~~~~~~~~~~-k~vi~  334 (335)
                      ++++|++.+.+++.. |++++
T Consensus       309 ~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         309 SVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHHcCCCCceEEeC
Confidence            999999999877655 88764

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=3.2e-28  Score=220.65  Aligned_cols=249  Identities=22%  Similarity=0.273  Sum_probs=202.9

Q ss_pred             cccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeecc
Q 019822           20 ILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHI   99 (335)
Q Consensus        20 p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~   99 (335)
                      |.++| ||+ +|+|+++|+++..|++||+|+..                             ..+               
T Consensus        52 ~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~-----------------------------~~~---------------   85 (305)
T cd08270          52 GAVPG-WDA-AGVVERAAADGSGPAVGARVVGL-----------------------------GAM---------------   85 (305)
T ss_pred             CCccc-cee-EEEEEEeCCCCCCCCCCCEEEEe-----------------------------cCC---------------
Confidence            56899 999 99999999999999999999642                             112               


Q ss_pred             cccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEE
Q 019822          100 FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKI  178 (335)
Q Consensus       100 ~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V  178 (335)
                         |+|++|+.++.+.++++|+++++++++++++.+.|||+++...... ++++|+|+|+ |++|.+++++|+..|+ +|
T Consensus        86 ---g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v  160 (305)
T cd08270          86 ---GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HV  160 (305)
T ss_pred             ---cceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EE
Confidence               3899999999999999999999999999999999999988655444 6999999987 9999999999999999 89


Q ss_pred             EEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          179 IGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       179 ~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      +.+++++++.+.++++|++.++....           ++.+ .++|+++|++|+. .+..++++++.+ |+++.+|....
T Consensus       161 ~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~  226 (305)
T cd08270         161 VAVVGSPARAEGLRELGAAEVVVGGS-----------ELSG-APVDLVVDSVGGP-QLARALELLAPG-GTVVSVGSSSG  226 (305)
T ss_pred             EEEeCCHHHHHHHHHcCCcEEEeccc-----------cccC-CCceEEEECCCcH-HHHHHHHHhcCC-CEEEEEeccCC
Confidence            99999999999999999876654322           1223 3799999999987 789999999998 99999987543


Q ss_pred             ccccchhHHHhh--cCcEEEEeeccC-CCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEEEe
Q 019822          259 AMVPLNVIALAC--GGRTLKGTTFGG-IKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       259 ~~~~~~~~~~~~--~~~~~~g~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi~  334 (335)
                      ....++...+..  ++.++.++.... ......+..+++++.++++++.  +.+.++++++++|++.+.+++.. |++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~  304 (305)
T cd08270         227 EPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLD  304 (305)
T ss_pred             CcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            334455555543  588888876543 1113457788999999998754  66789999999999999877765 98887


Q ss_pred             C
Q 019822          335 I  335 (335)
Q Consensus       335 ~  335 (335)
                      +
T Consensus       305 ~  305 (305)
T cd08270         305 V  305 (305)
T ss_pred             C
Confidence            5

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=99.96  E-value=5.2e-28  Score=222.81  Aligned_cols=272  Identities=20%  Similarity=0.248  Sum_probs=209.2

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++...+.+ ...+|.++| ||+ +|+|+.+|++++.|++||+|+......|+                     +...+ 
T Consensus        42 d~~~~~~~~-~~~~~~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~---------------------~~~~~-   96 (339)
T cd08249          42 DWKHQDYGF-IPSYPAILG-CDF-AGTVVEVGSGVTRFKVGDRVAGFVHGGNP---------------------NDPRN-   96 (339)
T ss_pred             heeeeeccc-ccCCCceee-eee-eEEEEEeCCCcCcCCCCCEEEEEeccccC---------------------CCCCC-
Confidence            444444433 123567899 999 99999999999999999999865432221                     11112 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCC----------CCCCEEE
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV----------EKGSSVA  155 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~----------~~~~~Vl  155 (335)
                                       |++++|+.++.+.++++|+++++++++.+++.+.|||+++.+..++          .++++||
T Consensus        97 -----------------g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vl  159 (339)
T cd08249          97 -----------------GAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVL  159 (339)
T ss_pred             -----------------CcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEE
Confidence                             3899999999999999999999999999999999999988666544          7899999


Q ss_pred             EEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH
Q 019822          156 VLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS  234 (335)
Q Consensus       156 I~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~  234 (335)
                      |+|+ |.+|++++++|+.+|+ +|+.+. ++++.+.++++|++++++++.   .++.+.++++++ .++|+++|++|++.
T Consensus       160 I~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~-~~~d~vl~~~g~~~  233 (339)
T cd08249         160 IWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHD---PDVVEDIRAATG-GKLRYALDCISTPE  233 (339)
T ss_pred             EEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCC---chHHHHHHHhcC-CCeeEEEEeeccch
Confidence            9997 9999999999999999 888887 568999999999999998886   778888888776 48999999999855


Q ss_pred             HHHHHHHhhcc--CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC---------CCcCcHHHHHHHHhCCCCCC
Q 019822          235 LLSEALETTKV--GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI---------KTKSDLPTLLDKCKNKEFKL  303 (335)
Q Consensus       235 ~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~~i~~~~~~~  303 (335)
                      .+..+++++++  + |+++.++...... .+.      .+..+.......+         .....+..++++++++++.+
T Consensus       234 ~~~~~~~~l~~~~~-g~~v~~g~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  305 (339)
T cd08249         234 SAQLCAEALGRSGG-GKLVSLLPVPEET-EPR------KGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKP  305 (339)
T ss_pred             HHHHHHHHHhccCC-CEEEEecCCCccc-cCC------CCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccC
Confidence            88999999999  9 9999998765311 111      1222222111110         11234667888999998876


Q ss_pred             CCceeEEee--chhHHHHHHHhcCCC-ee-eEEEeC
Q 019822          304 HQLLTHHVK--LEEIDKAIQLLKQPD-CV-KVLITI  335 (335)
Q Consensus       304 ~~~~~~~~~--l~~~~ea~~~~~~~~-~~-k~vi~~  335 (335)
                      .+  ...++  ++++++|++.+.+++ .. |+++++
T Consensus       306 ~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         306 HP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             CC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            53  34567  999999999998877 54 998874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.96  E-value=8.2e-28  Score=219.84  Aligned_cols=273  Identities=21%  Similarity=0.242  Sum_probs=207.6

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|++  +++..|++||+|+.....                       .|...+
T Consensus        42 d~~~~~g~~~~~~~~~~~~g-~e~-~G~V~~--~~~~~~~~Gd~V~~~~~~-----------------------~~~~~~   94 (323)
T TIGR02823        42 DALAITGKGGVVRSYPMIPG-IDA-AGTVVS--SEDPRFREGDEVIVTGYG-----------------------LGVSHD   94 (323)
T ss_pred             HHHHHcCCCCCCCCCCccce-eee-EEEEEe--cCCCCCCCCCEEEEccCC-----------------------CCCCCC
Confidence            33444565533 34688999 999 999998  556789999999864311                       121122


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHh--cCCCCCC-EEEEEcC-C
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE--AKVEKGS-SVAVLGL-G  160 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~~~-~VlI~G~-g  160 (335)
                                        |++++|+.++++.++++|+++++++++++++.+.+|+.++...  +.+.+++ +|||+|+ |
T Consensus        95 ------------------g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g  156 (323)
T TIGR02823        95 ------------------GGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATG  156 (323)
T ss_pred             ------------------ccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCc
Confidence                              3899999999999999999999999999998999998876433  4478898 9999997 9


Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      .+|.+++++|+.+|+ +++++++++++.+.++++|++.+++.++   .+.  .++.+..+ ++|+++||+|+. .+..++
T Consensus       157 ~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~--~~~~~~~~-~~d~vld~~g~~-~~~~~~  228 (323)
T TIGR02823       157 GVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED---LSP--PGKPLEKE-RWAGAVDTVGGH-TLANVL  228 (323)
T ss_pred             HHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc---HHH--HHHHhcCC-CceEEEECccHH-HHHHHH
Confidence            999999999999999 8888888888889999999988888765   333  45555555 599999999987 678999


Q ss_pred             HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      ++++++ |+++.+|.......+++...++.+++++.+........   ...+..+.+++..+.++.  + .+.+++++++
T Consensus       229 ~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~  304 (323)
T TIGR02823       229 AQLKYG-GAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLES--I-TREITLEELP  304 (323)
T ss_pred             HHhCCC-CEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHH
Confidence            999997 99999997653334444455556889988865432111   112445556666776543  2 4589999999


Q ss_pred             HHHHHhcCCCee-eEEEeC
Q 019822          318 KAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       318 ea~~~~~~~~~~-k~vi~~  335 (335)
                      +||+.+.+++.. |++++.
T Consensus       305 ~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       305 EALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             HHHHHHhCCCccceEEEeC
Confidence            999999887765 888763

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.96  E-value=1.4e-27  Score=218.52  Aligned_cols=263  Identities=19%  Similarity=0.204  Sum_probs=200.6

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+++|  +..|++||+|+..+..                       .|...+             
T Consensus        56 ~~~~~~g-~e~-~G~V~~~~--~~~~~~Gd~V~~~~~~-----------------------~~~~~~-------------   95 (326)
T cd08289          56 RYPFIPG-IDL-AGTVVESN--DPRFKPGDEVIVTSYD-----------------------LGVSHH-------------   95 (326)
T ss_pred             CCCcCcc-cce-eEEEEEcC--CCCCCCCCEEEEcccc-----------------------cCCCCC-------------
Confidence            4588999 999 99999964  5679999999865321                       122222             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhc--CC-CCCCEEEEEcC-CHHHHHHHHHHHHc
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA--KV-EKGSSVAVLGL-GTVGLGAVDGARMH  173 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~--~~-~~~~~VlI~G~-g~vG~~ai~la~~~  173 (335)
                           |+|++|+.++++.++++|+++++++++.+++.+.|||.++....  .. .++++|||+|+ |.+|.+++++|+.+
T Consensus        96 -----g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~  170 (326)
T cd08289          96 -----GGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKL  170 (326)
T ss_pred             -----CcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHC
Confidence                 38999999999999999999999999999999999998875432  33 34789999987 99999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          174 GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       174 G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      |+ +|+++++++++.+.++++|++++++.++   . ....+++++ +.++|+++|++|+. .+...+++++++ |+++.+
T Consensus       171 g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~-~~~~~~~~~-~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~i~~  242 (326)
T cd08289         171 GY-EVVASTGKADAADYLKKLGAKEVIPREE---L-QEESIKPLE-KQRWAGAVDPVGGK-TLAYLLSTLQYG-GSVAVS  242 (326)
T ss_pred             CC-eEEEEecCHHHHHHHHHcCCCEEEcchh---H-HHHHHHhhc-cCCcCEEEECCcHH-HHHHHHHHhhcC-CEEEEE
Confidence            99 8999999999999999999999988775   3 345566664 45899999999986 789999999998 999999


Q ss_pred             ccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCC---CCceeEEeechhHHHHHHHhcCCCee-
Q 019822          254 GVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKL---HQLLTHHVKLEEIDKAIQLLKQPDCV-  329 (335)
Q Consensus       254 g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~l~~~~ea~~~~~~~~~~-  329 (335)
                      |.......+++...++.+++++.+...... .......+++.+.+ .+.+   ...++++++++++++||+.+.+++.. 
T Consensus       243 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~g  320 (326)
T cd08289         243 GLTGGGEVETTVFPFILRGVNLLGIDSVEC-PMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTG  320 (326)
T ss_pred             eecCCCCCCcchhhhhhccceEEEEEeEec-CchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccc
Confidence            976433344445566568899988753211 01122333333322 2221   12357899999999999999887765 


Q ss_pred             eEEEeC
Q 019822          330 KVLITI  335 (335)
Q Consensus       330 k~vi~~  335 (335)
                      |+++++
T Consensus       321 kvvv~~  326 (326)
T cd08289         321 RTVVKL  326 (326)
T ss_pred             eEEEeC
Confidence            888764

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08251 polyketide_synthase polyketide synthase

Probab=99.96  E-value=6.6e-28  Score=217.73  Aligned_cols=267  Identities=19%  Similarity=0.243  Sum_probs=211.2

Q ss_pred             EeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822            9 SFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS   87 (335)
Q Consensus         9 ~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~   87 (335)
                      ...|.++. ..+|.++| ||+ +|+|+++|+++.+|++||+|+.....                           .+   
T Consensus        26 ~~~~~~~~~~~~~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~~---------------------------~~---   73 (303)
T cd08251          26 CVRGLYPTMPPYPFTPG-FEA-SGVVRAVGPHVTRLAVGDEVIAGTGE---------------------------SM---   73 (303)
T ss_pred             HHCCCCCCCCCCCCCcC-cee-eEEEEEECCCCCCCCCCCEEEEecCC---------------------------CC---
Confidence            34454443 35688999 999 99999999999999999999754210                           11   


Q ss_pred             cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHH
Q 019822           88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGA  166 (335)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~a  166 (335)
                                     |+|++|+.++++.++++|+++++++++.++..+.+||+++ +...+.++++++|+|+ |.+|+++
T Consensus        74 ---------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~  137 (303)
T cd08251          74 ---------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMA  137 (303)
T ss_pred             ---------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHH
Confidence                           3899999999999999999999999999999999999987 5788999999999965 9999999


Q ss_pred             HHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccC
Q 019822          167 VDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG  246 (335)
Q Consensus       167 i~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~  246 (335)
                      +++++++|+ +|+++++++++.+.++++|++.+++...   .++...+.++++++++|+++|++++. .....+++++++
T Consensus       138 ~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~  212 (303)
T cd08251         138 VQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRGVDVVINTLSGE-AIQKGLNCLAPG  212 (303)
T ss_pred             HHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHHhccC
Confidence            999999999 9999999999999999999999998876   67888888888888999999999765 778999999997


Q ss_pred             CeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCC------CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHH
Q 019822          247 KGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA  319 (335)
Q Consensus       247 ~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea  319 (335)
                       |+++.++.... ....+....+. ++..+....+....      ..+.+.++++++.++.+++.  .++.+++++++++
T Consensus       213 -g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~  288 (303)
T cd08251         213 -GRYVEIAMTALKSAPSVDLSVLS-NNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPT--VSRIFPFDDIGEA  288 (303)
T ss_pred             -cEEEEEeccCCCccCccChhHhh-cCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCC--CceEEcHHHHHHH
Confidence             99999986542 22233333333 44444433221110      11346678888888886543  5678999999999


Q ss_pred             HHHhcCCCee-eEE
Q 019822          320 IQLLKQPDCV-KVL  332 (335)
Q Consensus       320 ~~~~~~~~~~-k~v  332 (335)
                      ++.+.+++.. |++
T Consensus       289 ~~~~~~~~~~~~iv  302 (303)
T cd08251         289 YRYLSDRENIGKVV  302 (303)
T ss_pred             HHHHHhCCCcceEe
Confidence            9999877654 665

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.96  E-value=1.1e-27  Score=217.70  Aligned_cols=265  Identities=23%  Similarity=0.270  Sum_probs=216.0

Q ss_pred             ecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccc
Q 019822           11 ALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRM   89 (335)
Q Consensus        11 ~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~   89 (335)
                      .|.++. ..+|.++| ||+ +|+|+++|+++..+++||+|+..                             ..+     
T Consensus        48 ~~~~~~~~~~~~~~g-~e~-~G~v~~vg~~~~~~~~Gd~V~~~-----------------------------~~~-----   91 (323)
T cd05276          48 QGLYPPPPGASDILG-LEV-AGVVVAVGPGVTGWKVGDRVCAL-----------------------------LAG-----   91 (323)
T ss_pred             CCCCCCCCCCCCccc-cee-EEEEEeeCCCCCCCCCCCEEEEe-----------------------------cCC-----
Confidence            344432 34678999 999 99999999999999999999643                             112     


Q ss_pred             cccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHH
Q 019822           90 SVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVD  168 (335)
Q Consensus        90 ~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~  168 (335)
                                   |+|++|+.++.+.++++|+++++.+++.++.++.++|+++.+...+.++++|+|+|+ |.+|+++++
T Consensus        92 -------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~  158 (323)
T cd05276          92 -------------GGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQ  158 (323)
T ss_pred             -------------CceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHH
Confidence                         289999999999999999999999999999999999999877788999999999996 999999999


Q ss_pred             HHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCe
Q 019822          169 GARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG  248 (335)
Q Consensus       169 la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G  248 (335)
                      +++..|+ +|+++++++++.+.++++|++.+++...   .++...+.+.+.++++|+++|++|+. .+...++++.++ |
T Consensus       159 ~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~-g  232 (323)
T cd05276         159 LAKALGA-RVIATAGSEEKLEACRALGADVAINYRT---EDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPD-G  232 (323)
T ss_pred             HHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCc---hhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccC-C
Confidence            9999999 8999999999999999899888888776   67777888777777899999999987 578899999997 9


Q ss_pred             EEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC-------cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          249 KVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       249 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      +++.++........++...++.+++++.++.......       ...+.++++++.++++.+  ..++.+++++++++++
T Consensus       233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~  310 (323)
T cd05276         233 RLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHR  310 (323)
T ss_pred             EEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHH
Confidence            9999987543223455555556889999877544211       012456778888888654  3667899999999999


Q ss_pred             HhcCCCee-eEE
Q 019822          322 LLKQPDCV-KVL  332 (335)
Q Consensus       322 ~~~~~~~~-k~v  332 (335)
                      .+.+++.. |++
T Consensus       311 ~~~~~~~~~kvv  322 (323)
T cd05276         311 RMESNEHIGKIV  322 (323)
T ss_pred             HHHhCCCcceEe
Confidence            99876654 665

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.96  E-value=1.1e-27  Score=205.76  Aligned_cols=223  Identities=22%  Similarity=0.258  Sum_probs=186.0

Q ss_pred             cceeeEEecccceEEcCCCCCcccc--cccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEE
Q 019822          104 TWSEYMVIDANYVVKVDPSIDPSDA--SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIG  180 (335)
Q Consensus       104 ~~~~~~~v~~~~~~~lp~~~~~~~a--a~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~  180 (335)
                      +|++|..++.+.+.+++++.-+-.+  ..+..+..|||.+|.+....++|++|+|.+| |++|..+.|+||..|+ +|++
T Consensus       102 GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVG  180 (340)
T COG2130         102 GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVG  180 (340)
T ss_pred             cceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEE
Confidence            7999999999999999866433332  2356688999999999999999999999986 9999999999999999 9999


Q ss_pred             EcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-
Q 019822          181 IDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-  258 (335)
Q Consensus       181 ~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-  258 (335)
                      ++.+++|.+++.+ +|.+.++||+.   .++.+.+++..+. |+|+.||++|++ .++..+..|+.+ +|++.+|..+. 
T Consensus       181 iaGg~eK~~~l~~~lGfD~~idyk~---~d~~~~L~~a~P~-GIDvyfeNVGg~-v~DAv~~~ln~~-aRi~~CG~IS~Y  254 (340)
T COG2130         181 IAGGAEKCDFLTEELGFDAGIDYKA---EDFAQALKEACPK-GIDVYFENVGGE-VLDAVLPLLNLF-ARIPVCGAISQY  254 (340)
T ss_pred             ecCCHHHHHHHHHhcCCceeeecCc---ccHHHHHHHHCCC-CeEEEEEcCCch-HHHHHHHhhccc-cceeeeeehhhc
Confidence            9999999999977 99999999999   8999999998875 999999999998 899999999997 99999997665 


Q ss_pred             ccc-----cchhHHHhhcCcEEEEeecc-CCCC--cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-
Q 019822          259 AMV-----PLNVIALACGGRTLKGTTFG-GIKT--KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-  329 (335)
Q Consensus       259 ~~~-----~~~~~~~~~~~~~~~g~~~~-~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-  329 (335)
                      ...     +-....++.+.+++.|+.+. .+..  .+..+++..++.+|++..+.  +-+-.|+.+++||.-+.+++.. 
T Consensus       255 N~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~G  332 (340)
T COG2130         255 NAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFG  332 (340)
T ss_pred             CCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccc
Confidence            111     12233455578899998873 3321  24567888999999988874  3344799999999999999876 


Q ss_pred             eEEEeC
Q 019822          330 KVLITI  335 (335)
Q Consensus       330 k~vi~~  335 (335)
                      |+++++
T Consensus       333 K~vvKv  338 (340)
T COG2130         333 KLVVKV  338 (340)
T ss_pred             eEEEEe
Confidence            998864

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.96  E-value=2.3e-27  Score=217.98  Aligned_cols=268  Identities=20%  Similarity=0.193  Sum_probs=210.5

Q ss_pred             ecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCcccc
Q 019822           11 ALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS   90 (335)
Q Consensus        11 ~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~   90 (335)
                      .|.++...+|.++| ||+ +|+|+++|+++..|++||+|+....                          ...+      
T Consensus        51 ~~~~~~~~~~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~--------------------------~~~~------   96 (336)
T cd08252          51 AGGAPVPGQPKILG-WDA-SGVVEAVGSEVTLFKVGDEVYYAGD--------------------------ITRP------   96 (336)
T ss_pred             cCCCCCCCCCcccc-cce-EEEEEEcCCCCCCCCCCCEEEEcCC--------------------------CCCC------
Confidence            44444334677899 999 9999999999999999999975310                          0012      


Q ss_pred             ccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCC-----CCEEEEEcC-CHHHH
Q 019822           91 VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK-----GSSVAVLGL-GTVGL  164 (335)
Q Consensus        91 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----~~~VlI~G~-g~vG~  164 (335)
                                  |+|++|+.++.+.++++|+++++++++.+++.+.+||+++.+.+.+.+     +++|+|+|+ |++|+
T Consensus        97 ------------g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~  164 (336)
T cd08252          97 ------------GSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGS  164 (336)
T ss_pred             ------------ccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHH
Confidence                        389999999999999999999999999999999999999888888887     999999985 99999


Q ss_pred             HHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          165 GAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       165 ~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      +++++|+.+| + +|+++++++++.+.++++|++++++++.    ++...++.. .++++|+++|++++...+..+++++
T Consensus       165 ~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~i~~~-~~~~~d~vl~~~~~~~~~~~~~~~l  238 (336)
T cd08252         165 IAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHHQ----DLAEQLEAL-GIEPVDYIFCLTDTDQHWDAMAELI  238 (336)
T ss_pred             HHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc----cHHHHHHhh-CCCCCCEEEEccCcHHHHHHHHHHh
Confidence            9999999999 7 9999999999999999999988888763    355556544 4458999999999766889999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC---CC------cCcHHHHHHHHhCCCCCCCCc-eeEEeec
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI---KT------KSDLPTLLDKCKNKEFKLHQL-LTHHVKL  313 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~------~~~~~~~~~~i~~~~~~~~~~-~~~~~~l  313 (335)
                      +.+ |+++.+|...   ..++...+..+++++.+......   ..      ...+..+++++.++.+.+... ..+.+++
T Consensus       239 ~~~-g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  314 (336)
T cd08252         239 APQ-GHICLIVDPQ---EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA  314 (336)
T ss_pred             cCC-CEEEEecCCC---CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH
Confidence            997 9999998653   23444444457788877554321   00      123667889999998765311 1235799


Q ss_pred             hhHHHHHHHhcCCCee-eEEEe
Q 019822          314 EEIDKAIQLLKQPDCV-KVLIT  334 (335)
Q Consensus       314 ~~~~ea~~~~~~~~~~-k~vi~  334 (335)
                      +++++|++.+.+++.. |++++
T Consensus       315 ~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         315 ENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHHHHHHHHHcCCccceEEeC
Confidence            9999999999887765 77763

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>smart00829 PKS_ER Enoylreductase

Probab=99.96  E-value=1.3e-27  Score=213.75  Aligned_cols=265  Identities=20%  Similarity=0.265  Sum_probs=211.4

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++...|.++   .|.++| ||+ +|+|+++|+.+..|++||+|+...                                
T Consensus        13 d~~~~~g~~~---~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~--------------------------------   55 (288)
T smart00829       13 DVLIALGLLP---GEAVLG-GEC-AGVVTRVGPGVTGLAVGDRVMGLA--------------------------------   55 (288)
T ss_pred             HHHHhcCCCC---CCCCCC-cee-EEEEEeeCCCCcCCCCCCEEEEEc--------------------------------
Confidence            3344445443   357899 999 999999999999999999997431                                


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL  164 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~  164 (335)
                                      .|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.+...+.++++|+|+|+ |.+|+
T Consensus        56 ----------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~  119 (288)
T smart00829       56 ----------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQ  119 (288)
T ss_pred             ----------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHH
Confidence                            1389999999999999999999999999999999999998878888999999999985 99999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--ceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      +++++++..|+ +|+++++++++.+.++++|+  +.+++++.   .++.+.+.+.++++++|+++|++++. .+...+++
T Consensus       120 ~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~  194 (288)
T smart00829      120 AAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLAGE-FLDASLRC  194 (288)
T ss_pred             HHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHh
Confidence            99999999999 89999999999999999998  77888776   66778888887777899999999965 77899999


Q ss_pred             hccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCC-----CcCcHHHHHHHHhCCCCCCCCceeEEeechhH
Q 019822          243 TKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK-----TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI  316 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~  316 (335)
                      ++++ |+++.++.... ....++...+ .+++.+.+..+....     ....+..+++++.++++++.  ..+.++++++
T Consensus       195 l~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  270 (288)
T smart00829      195 LAPG-GRFVEIGKRDIRDNSQLGMAPF-RRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDV  270 (288)
T ss_pred             ccCC-cEEEEEcCcCCccccccchhhh-cCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHH
Confidence            9997 99999986542 1223333332 356666665432111     11235678888888887653  4578999999


Q ss_pred             HHHHHHhcCCCee-eEE
Q 019822          317 DKAIQLLKQPDCV-KVL  332 (335)
Q Consensus       317 ~ea~~~~~~~~~~-k~v  332 (335)
                      +++++.+..++.. |++
T Consensus       271 ~~~~~~~~~~~~~~~iv  287 (288)
T smart00829      271 EDAFRYMQQGKHIGKVV  287 (288)
T ss_pred             HHHHHHHhcCCCcceEe
Confidence            9999999887654 655

Enoylreductase in Polyketide synthases.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.96  E-value=4.5e-27  Score=214.12  Aligned_cols=276  Identities=22%  Similarity=0.267  Sum_probs=219.0

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-c
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-L   83 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~   83 (335)
                      |++...|.++. ...|.++| ||+ +|+|+++|+++..|++||+|+....                         |+. .
T Consensus        43 d~~~~~g~~~~~~~~~~~~g-~e~-~G~v~~~g~~~~~~~~Gd~v~~~~~-------------------------~~~~~   95 (325)
T cd08253          43 DTYIRAGAYPGLPPLPYVPG-SDG-AGVVEAVGEGVDGLKVGDRVWLTNL-------------------------GWGRR   95 (325)
T ss_pred             HhhhccCCCCCCCCCCeecc-cce-EEEEEeeCCCCCCCCCCCEEEEecc-------------------------ccCCC
Confidence            34444555432 34678999 999 9999999999999999999986532                         100 1


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTV  162 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~v  162 (335)
                      .                  |++++|+.++.+.++++|+++++++++.+++++.+||+++.+..++.++++++|+|+ |.+
T Consensus        96 ~------------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~  157 (325)
T cd08253          96 Q------------------GTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAV  157 (325)
T ss_pred             C------------------cceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchH
Confidence            1                  389999999999999999999999999999999999999887789999999999986 999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |++++++++..|+ +|+++++++++.+.++++|++++++.+.   .++...+++++.++++|+++|++++. .....+++
T Consensus       158 g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~  232 (325)
T cd08253         158 GHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRA---EDLADRILAATAGQGVDVIIEVLANV-NLAKDLDV  232 (325)
T ss_pred             HHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---cCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHh
Confidence            9999999999999 9999999999999999999988888776   66777888877777999999999987 67888999


Q ss_pred             hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHH
Q 019822          243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA  319 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea  319 (335)
                      ++.+ |+++.++... ...+++...++.++..+.+........   ...+..+.+++.++.++..  .++.+++++++++
T Consensus       233 l~~~-g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~  308 (325)
T cd08253         233 LAPG-GRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAA  308 (325)
T ss_pred             hCCC-CEEEEEeecC-CcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHH
Confidence            9997 9999998754 233444455455777777765332110   1224455667777776543  5678999999999


Q ss_pred             HHHhcCCCee-eEEEeC
Q 019822          320 IQLLKQPDCV-KVLITI  335 (335)
Q Consensus       320 ~~~~~~~~~~-k~vi~~  335 (335)
                      ++.+.+++.. |+++++
T Consensus       309 ~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         309 HEAVESGGAIGKVVLDP  325 (325)
T ss_pred             HHHHHcCCCcceEEEeC
Confidence            9999877665 888763

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.96  E-value=3.4e-27  Score=215.03  Aligned_cols=260  Identities=21%  Similarity=0.283  Sum_probs=214.6

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+.+|+++..+++||+|+..                             ..+             
T Consensus        56 ~~~~~~g-~e~-~G~v~~vg~~~~~~~~Gd~V~~~-----------------------------~~~-------------   91 (325)
T TIGR02824        56 GASDILG-LEV-AGEVVAVGEGVSRWKVGDRVCAL-----------------------------VAG-------------   91 (325)
T ss_pred             CCCCCcc-cee-EEEEEEeCCCCCCCCCCCEEEEc-----------------------------cCC-------------
Confidence            3568999 999 99999999999999999999642                             111             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA  176 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~  176 (335)
                           |++++|+.++...++++|+++++..++.++.++.++|+++.+...+.++++++|+|+ |.+|.+++++++.+|+ 
T Consensus        92 -----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-  165 (325)
T TIGR02824        92 -----GGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-  165 (325)
T ss_pred             -----CcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-
Confidence                 289999999999999999999999999999999999998888889999999999986 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +|+++.+++++.+.++++|++.+++...   .++...+++...++++|+++|++++. .+..++++++++ |+++.++..
T Consensus       166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~v~~g~~  240 (325)
T TIGR02824       166 RVFTTAGSDEKCAACEALGADIAINYRE---EDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALD-GRIVQIGFQ  240 (325)
T ss_pred             EEEEEeCCHHHHHHHHHcCCcEEEecCc---hhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccC-cEEEEEecC
Confidence            9999999999999898899888887765   66777888877777899999999976 678899999997 999999875


Q ss_pred             CCccccchhHHHhhcCcEEEEeeccCC-CC------cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee
Q 019822          257 VDAMVPLNVIALACGGRTLKGTTFGGI-KT------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV  329 (335)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~  329 (335)
                      ......++...++.+++++.+...... ..      ...+..++++++++.+.+.  .++.+++++++++++.+.+++..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~  318 (325)
T TIGR02824       241 GGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDAAQAHALMESGDHI  318 (325)
T ss_pred             CCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHHHHHHHHHHhCCCc
Confidence            432225555556579999998875442 11      1123456778888886543  66789999999999998877655


Q ss_pred             -eEEEe
Q 019822          330 -KVLIT  334 (335)
Q Consensus       330 -k~vi~  334 (335)
                       |++++
T Consensus       319 ~~~v~~  324 (325)
T TIGR02824       319 GKIVLT  324 (325)
T ss_pred             ceEEEe
Confidence             88875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.1e-26  Score=212.00  Aligned_cols=276  Identities=24%  Similarity=0.303  Sum_probs=216.8

Q ss_pred             EeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            7 LISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         7 ~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      ++...|.++. ..+|.++| ||+ +|+|+.+|+++..|++||+|+..+..                        +...+ 
T Consensus        44 ~~~~~~~~~~~~~~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~~~------------------------~~~~~-   96 (328)
T cd08268          44 AMFRRGAYIEPPPLPARLG-YEA-AGVVEAVGAGVTGFAVGDRVSVIPAA------------------------DLGQY-   96 (328)
T ss_pred             hheeccccCCCCCCCCCCC-cce-EEEEEeeCCCCCcCCCCCEEEecccc------------------------ccCCC-
Confidence            3334444432 24477899 999 99999999999999999999764321                        11111 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL  164 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~  164 (335)
                                       |++++|+.++.+.++++|+++++++++.+++.+.++|+++.....+.++++++|+|+ |.+|+
T Consensus        97 -----------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~  159 (328)
T cd08268          97 -----------------GTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGL  159 (328)
T ss_pred             -----------------ccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHH
Confidence                             389999999999999999999999999999999999999888888999999999987 99999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++++++..|+ +++.+++++++.+.++++|++.+++.+.   ..+...+.+.+.++++|++++++++. ....++++++
T Consensus       160 ~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~  234 (328)
T cd08268         160 AAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE---EDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALA  234 (328)
T ss_pred             HHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhc
Confidence            99999999999 9999999999999998899888888776   66777787777777899999999986 7789999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCC-CcCc----HHHHHHHHhCCCCCCCCceeEEeechhHHHH
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK-TKSD----LPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA  319 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~----~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea  319 (335)
                      ++ |+++.+|........++....+.+++.+.+....... .+.+    +..+.+++.++.+.+.  .++.++++++.++
T Consensus       235 ~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  311 (328)
T cd08268         235 PG-GTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEA  311 (328)
T ss_pred             cC-CEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHH
Confidence            97 9999998654322334444345588888887654321 1122    3345555667775543  5678999999999


Q ss_pred             HHHhcCCCee-eEEEe
Q 019822          320 IQLLKQPDCV-KVLIT  334 (335)
Q Consensus       320 ~~~~~~~~~~-k~vi~  334 (335)
                      ++.+.+++.. |++++
T Consensus       312 ~~~~~~~~~~~~vv~~  327 (328)
T cd08268         312 HRYLESGQQIGKIVVT  327 (328)
T ss_pred             HHHHHcCCCCceEEEe
Confidence            9998877654 88875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.95  E-value=7.1e-27  Score=209.24  Aligned_cols=256  Identities=21%  Similarity=0.245  Sum_probs=208.5

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+++|+++..|++||+|+...                                            
T Consensus        26 ~~~~~~g-~e~-~G~v~~~g~~~~~~~~Gd~V~~~~--------------------------------------------   59 (293)
T cd05195          26 GDETPLG-LEC-SGIVTRVGSGVTGLKVGDRVMGLA--------------------------------------------   59 (293)
T ss_pred             CCCCccc-eee-eEEEEeecCCccCCCCCCEEEEEe--------------------------------------------
Confidence            3578999 999 999999999999999999997531                                            


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA  176 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~  176 (335)
                          .|+|++|+.++.+.++++|+++++.+++.+++++.+++.++.+...+.++++|+|+|+ |.+|++++++++.+|+ 
T Consensus        60 ----~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~-  134 (293)
T cd05195          60 ----PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA-  134 (293)
T ss_pred             ----cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCC-
Confidence                1389999999999999999999999999998899999999878788999999999975 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcC--CceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822          177 KIIGIDKNPWKKEKGKAFG--MTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lg--a~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      +|+++++++++.+.+++++  ++.+++++.   .++.+.+++.+.++++|+++|++++. .+..++++++++ |+++.++
T Consensus       135 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~g  209 (293)
T cd05195         135 EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPF-GRFVEIG  209 (293)
T ss_pred             EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccC-ceEEEee
Confidence            8999998889999998888  678888776   67888888888788999999999988 789999999997 9999998


Q ss_pred             cCCC-ccccchhHHHhhcCcEEEEeeccCCC--C----cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCC
Q 019822          255 VGVD-AMVPLNVIALACGGRTLKGTTFGGIK--T----KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD  327 (335)
Q Consensus       255 ~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~--~----~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~  327 (335)
                      .... ....+....+. +++.+....+....  .    .+.+..+++++.++++.  +..++.+++++++++++.+.+++
T Consensus       210 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~  286 (293)
T cd05195         210 KRDILSNSKLGMRPFL-RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGK  286 (293)
T ss_pred             ccccccCCccchhhhc-cCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCC
Confidence            7553 11223333322 55666654432211  0    12456788888888865  34567899999999999998776


Q ss_pred             ee-eEE
Q 019822          328 CV-KVL  332 (335)
Q Consensus       328 ~~-k~v  332 (335)
                      .. |++
T Consensus       287 ~~~~iv  292 (293)
T cd05195         287 HIGKVV  292 (293)
T ss_pred             CCceec
Confidence            54 665

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.95  E-value=1.5e-26  Score=212.06  Aligned_cols=251  Identities=23%  Similarity=0.236  Sum_probs=202.8

Q ss_pred             cccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeecc
Q 019822           20 ILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHI   99 (335)
Q Consensus        20 p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~   99 (335)
                      +.++| +|+ +|+|+++|++  .|++||+|+..                                               
T Consensus        65 ~~~~g-~e~-~G~V~~~G~~--~~~~Gd~V~~~-----------------------------------------------   93 (329)
T cd05288          65 GEPMR-GGG-VGEVVESRSP--DFKVGDLVSGF-----------------------------------------------   93 (329)
T ss_pred             CCccc-Cce-EEEEEecCCC--CCCCCCEEecc-----------------------------------------------
Confidence            56789 999 9999999964  79999999632                                               


Q ss_pred             cccccceeeEEecc-cceEEcCCCCC--cccccc-cccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcC
Q 019822          100 FSCSTWSEYMVIDA-NYVVKVDPSID--PSDASF-LSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHG  174 (335)
Q Consensus       100 ~~~g~~~~~~~v~~-~~~~~lp~~~~--~~~aa~-l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G  174 (335)
                         ++|++|+.+++ +.++++|++++  +.++++ +++++.|||+++.+...+.++++|||+|+ |.+|++++++|+..|
T Consensus        94 ---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G  170 (329)
T cd05288          94 ---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLG  170 (329)
T ss_pred             ---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcC
Confidence               16999999999 99999999985  445545 88899999999877788999999999985 999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          175 AAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       175 ~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      + +|+++++++++.+.+++ +|+++++++++   .++...+.++++ +++|+++|++|+. .+..++++++++ |+++.+
T Consensus       171 ~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~v~~~~~-~~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v~~  243 (329)
T cd05288         171 A-RVVGIAGSDEKCRWLVEELGFDAAINYKT---PDLAEALKEAAP-DGIDVYFDNVGGE-ILDAALTLLNKG-GRIALC  243 (329)
T ss_pred             C-EEEEEeCCHHHHHHHHhhcCCceEEecCC---hhHHHHHHHhcc-CCceEEEEcchHH-HHHHHHHhcCCC-ceEEEE
Confidence            9 99999999999999988 99999998886   677778887775 5899999999986 789999999997 999999


Q ss_pred             ccCCCccc-----cchhHHHhhcCcEEEEeeccCCCC--cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCC
Q 019822          254 GVGVDAMV-----PLNVIALACGGRTLKGTTFGGIKT--KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP  326 (335)
Q Consensus       254 g~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~  326 (335)
                      |.......     .++......+++++.+........  .+.+..+++++.++.+++.+  ...+++++++++++.+.++
T Consensus       244 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~  321 (329)
T cd05288         244 GAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTG  321 (329)
T ss_pred             eeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcC
Confidence            86543111     122344456888888776433211  13467788999999987653  3458999999999999877


Q ss_pred             Cee-eEEE
Q 019822          327 DCV-KVLI  333 (335)
Q Consensus       327 ~~~-k~vi  333 (335)
                      +.. |+++
T Consensus       322 ~~~gkvvv  329 (329)
T cd05288         322 KNTGKLVV  329 (329)
T ss_pred             CCccceeC
Confidence            654 6653

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.95  E-value=2.8e-26  Score=212.38  Aligned_cols=264  Identities=21%  Similarity=0.200  Sum_probs=195.2

Q ss_pred             ccccccccccceEEEEEeCCCCC-cccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           19 FILVFSGTKVSGKVVESAGDEVK-EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        19 ~p~v~G~~e~~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .|.++| ||+ +|+|+++|++++ .|++||+|+......|+                        .              
T Consensus        58 ~~~~~g-~e~-~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~------------------------~--------------   97 (352)
T cd08247          58 KEKGLG-RDY-SGVIVKVGSNVASEWKVGDEVCGIYPHPYG------------------------G--------------   97 (352)
T ss_pred             CCCccC-cee-EEEEEEeCcccccCCCCCCEEEEeecCCCC------------------------C--------------
Confidence            377899 999 999999999998 89999999865322110                        1              


Q ss_pred             cccccccceeeEEeccc----ceEEcCCCCCcccccccccchhhhhHHHHHhc-CCCCCCEEEEEcC-CHHHHHHHHHHH
Q 019822           98 HIFSCSTWSEYMVIDAN----YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGL-GTVGLGAVDGAR  171 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~----~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~~~~VlI~G~-g~vG~~ai~la~  171 (335)
                          .|+|++|++++..    .++++|+++++++++.+++.+.|||+++.+.. .+.++++|+|+|+ +.+|.+++++|+
T Consensus        98 ----~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~  173 (352)
T cd08247          98 ----QGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAK  173 (352)
T ss_pred             ----CceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHH
Confidence                2489999999987    79999999999999999999999999987666 7999999999987 899999999999


Q ss_pred             HcCC-CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchh---HHHHH-HhhhCCCCccEEEEcCCChHHHHHHHHhhc--
Q 019822          172 MHGA-AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS---ISELV-KGITHGMGVDYCFECTGVPSLLSEALETTK--  244 (335)
Q Consensus       172 ~~G~-~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~---~~~~i-~~~~~g~g~d~vid~~g~~~~~~~~~~~l~--  244 (335)
                      .+|. +.|+.+. ++++.+.++++|++++++.++   .+   +...+ +..++++++|++|||+|+......++++++  
T Consensus       174 ~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~  249 (352)
T cd08247         174 NHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPK  249 (352)
T ss_pred             hcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCcc
Confidence            8854 3677776 456666788999999998776   44   44444 444436699999999998557789999999  


Q ss_pred             -cCCeEEEEEccCCCcccc-----------chhHHHh----hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCcee
Q 019822          245 -VGKGKVIVIGVGVDAMVP-----------LNVIALA----CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLT  308 (335)
Q Consensus       245 -~~~G~~v~~g~~~~~~~~-----------~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  308 (335)
                       ++ |+++.++........           +....+.    .+...+..... . ...+.+..+++++.++.+.+  ..+
T Consensus       250 ~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~--~~~  324 (352)
T cd08247         250 SKN-GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLL-D-PNADWIEKCAELIADGKVKP--PID  324 (352)
T ss_pred             CCC-CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEe-c-CCHHHHHHHHHHHhCCCeEe--eec
Confidence             97 999987532211111           0011111    12222221110 0 01234677889999998653  366


Q ss_pred             EEeechhHHHHHHHhcCCCee-eEEEeC
Q 019822          309 HHVKLEEIDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       309 ~~~~l~~~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      +.++++++++|++.+.+++.. |+++++
T Consensus       325 ~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         325 SVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             cEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            789999999999999887754 888764

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.95  E-value=4.6e-28  Score=235.55  Aligned_cols=265  Identities=18%  Similarity=0.222  Sum_probs=219.4

Q ss_pred             EEEeEeecCCCCCCcc-------ccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc
Q 019822            5 VTLISFALKDSQRLFI-------LVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA   77 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p-------~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~   77 (335)
                      .|+....|+.+....|       .++| -|| +|+          .+-|.||                            
T Consensus      1459 RDiMLasGkL~~DAiPG~~a~qdclLG-mEF-sGR----------d~~GrRv---------------------------- 1498 (2376)
T KOG1202|consen 1459 RDIMLASGKLSPDAIPGDLASQDCLLG-MEF-SGR----------DASGRRV---------------------------- 1498 (2376)
T ss_pred             HHHHHhcCCCCcccCCCccchhhheec-eee-ccc----------cCCCcEE----------------------------
Confidence            4666667877654333       6788 888 776          4568899                            


Q ss_pred             ccccccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           78 LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        78 ~~g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                       +|+.+..                  ++++-+.++.+++|.+|.+.++++|++.++.|+|+|++|+.+...++|++|||+
T Consensus      1499 -M~mvpAk------------------sLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIH 1559 (2376)
T KOG1202|consen 1499 -MGMVPAK------------------SLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIH 1559 (2376)
T ss_pred             -EEeeehh------------------hhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEe
Confidence             4555544                  799999999999999999999999999999999999999999999999999999


Q ss_pred             -cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-c---CCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          158 -GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F---GMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       158 -G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l---ga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                       |+|++|++||.+|.+.|+ +|+.+..|+||++++.+ |   -.+++-|+++   .+|..-+++.|.|+|+|+|+++...
T Consensus      1560 aGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd---tsFEq~vl~~T~GrGVdlVLNSLae 1635 (2376)
T KOG1202|consen 1560 AGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRD---TSFEQHVLWHTKGRGVDLVLNSLAE 1635 (2376)
T ss_pred             cCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccc---ccHHHHHHHHhcCCCeeeehhhhhH
Confidence             569999999999999999 99999999999999854 3   3556677887   8899999999999999999999988


Q ss_pred             hHHHHHHHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCC--CCCce
Q 019822          233 PSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFK--LHQLL  307 (335)
Q Consensus       233 ~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~--~~~~~  307 (335)
                      + -++..++||+.. ||+..+|...- ...++.+.-+. +|.+++|...-+..  ..+.+.++..++++|.-.  ..++.
T Consensus      1636 E-kLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfL-kNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ 1712 (2376)
T KOG1202|consen 1636 E-KLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFL-KNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLP 1712 (2376)
T ss_pred             H-HHHHHHHHHHhc-CeeeeecceecccCCcchhhhhh-cccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccc
Confidence            7 689999999997 99999997655 45566666555 99999998765442  234466677776655322  55667


Q ss_pred             eEEeechhHHHHHHHhcCCCee-eEEEeC
Q 019822          308 THHVKLEEIDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       308 ~~~~~l~~~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      +++|+-.++++||+.|.+++++ |||+++
T Consensus      1713 ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1713 TTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             cccccHHHHHHHHHHHhccCccceEEEEE
Confidence            8899999999999999999987 999863

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=3e-26  Score=209.08  Aligned_cols=260  Identities=24%  Similarity=0.266  Sum_probs=209.6

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      ..|.++| ||+ +|+|+++|+++..|++||+|+....                         |+..              
T Consensus        56 ~~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~~-------------------------~~~~--------------   94 (326)
T cd08272          56 PLPAILG-CDV-AGVVEAVGEGVTRFRVGDEVYGCAG-------------------------GLGG--------------   94 (326)
T ss_pred             CCCcccc-cce-eEEEEEeCCCCCCCCCCCEEEEccC-------------------------CcCC--------------
Confidence            3577899 999 9999999999999999999975421                         1110              


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA  176 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~  176 (335)
                         ..|++++|+.++..+++++|+++++..++.++..+.+||+++.+..++.++++++|+|+ |.+|++++++++.+|+ 
T Consensus        95 ---~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-  170 (326)
T cd08272          95 ---LQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-  170 (326)
T ss_pred             ---CCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-
Confidence               12489999999999999999999999999999899999999888899999999999985 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +|++++++ ++.+.++++|++.+++...   . +...+++.++++++|+++|++++. .....+++++++ |+++.++..
T Consensus       171 ~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~~~~  243 (326)
T cd08272         171 RVYATASS-EKAAFARSLGADPIIYYRE---T-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALY-GRVVSILGG  243 (326)
T ss_pred             EEEEEech-HHHHHHHHcCCCEEEecch---h-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccC-CEEEEEecC
Confidence            89999987 8888999999988888775   5 777888888888999999999986 678899999997 999999765


Q ss_pred             CCccccchhHHHhhcCcEEEEeeccC--CC------CcCcHHHHHHHHhCCCCCCCCcee-EEeechhHHHHHHHhcCCC
Q 019822          257 VDAMVPLNVIALACGGRTLKGTTFGG--IK------TKSDLPTLLDKCKNKEFKLHQLLT-HHVKLEEIDKAIQLLKQPD  327 (335)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~g~~~~~--~~------~~~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~~~ea~~~~~~~~  327 (335)
                      .  ..++.  ....+++.+.+.....  ..      ....+..+++++.++.+...  ++ +.+++++++++++.+.+++
T Consensus       244 ~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~  317 (326)
T cd08272         244 A--THDLA--PLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPL--LDPRTFPLEEAAAAHARLESGS  317 (326)
T ss_pred             C--ccchh--hHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccc--cccceecHHHHHHHHHHHHcCC
Confidence            3  22222  2234777777665322  10      12346678888888886543  33 7899999999999988766


Q ss_pred             ee-eEEEeC
Q 019822          328 CV-KVLITI  335 (335)
Q Consensus       328 ~~-k~vi~~  335 (335)
                      .. |+++++
T Consensus       318 ~~~~vv~~~  326 (326)
T cd08272         318 ARGKIVIDV  326 (326)
T ss_pred             cccEEEEEC
Confidence            54 888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.95  E-value=3.2e-26  Score=208.97  Aligned_cols=258  Identities=25%  Similarity=0.330  Sum_probs=203.1

Q ss_pred             ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeec
Q 019822           19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH   98 (335)
Q Consensus        19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~   98 (335)
                      .|.++| ||+ +|+|+.+|++++.+++||+|+....                          +..+              
T Consensus        56 ~~~~~g-~e~-~G~v~~~G~~~~~~~~Gd~V~~~~~--------------------------~~~~--------------   93 (325)
T cd08271          56 YPHVPG-VDG-AGVVVAVGAKVTGWKVGDRVAYHAS--------------------------LARG--------------   93 (325)
T ss_pred             CCcccc-cce-EEEEEEeCCCCCcCCCCCEEEeccC--------------------------CCCC--------------
Confidence            367899 999 9999999999999999999976421                          1112              


Q ss_pred             ccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822           99 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK  177 (335)
Q Consensus        99 ~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~  177 (335)
                          |++++|+.++.+.++++|+++++.+++.+.+.+.++++++.+..++.++++++|+|+ |.+|++++++++..|+ +
T Consensus        94 ----~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~  168 (325)
T cd08271          94 ----GSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-R  168 (325)
T ss_pred             ----ccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-E
Confidence                289999999999999999999999999999999999999888888999999999997 8999999999999999 8


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      |+.+. ++++.+.++++|++.+++.+.   .++...+++.+.++++|++++++++. .....++++++. |+++.++...
T Consensus       169 v~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~  242 (325)
T cd08271         169 VITTC-SKRNFEYVKSLGADHVIDYND---EDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRP  242 (325)
T ss_pred             EEEEE-cHHHHHHHHHcCCcEEecCCC---ccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCC
Confidence            88877 678888888899988888776   66777888887777999999999987 557789999997 9999997554


Q ss_pred             CccccchhHHHhhcCcEEEEeeccCC----------CCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCC
Q 019822          258 DAMVPLNVIALACGGRTLKGTTFGGI----------KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD  327 (335)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~  327 (335)
                      ... .  ...+ .+++.+....+...          ...+.+..++++++++.+.+.  .++.++++++.++++.+.+++
T Consensus       243 ~~~-~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~  316 (325)
T cd08271         243 DAS-P--DPPF-TRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRH  316 (325)
T ss_pred             CCc-c--hhHH-hhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCC
Confidence            211 1  1111 13333333222111          011234668888888886543  457899999999999998776


Q ss_pred             ee-eEEEeC
Q 019822          328 CV-KVLITI  335 (335)
Q Consensus       328 ~~-k~vi~~  335 (335)
                      .. |+++++
T Consensus       317 ~~~kiv~~~  325 (325)
T cd08271         317 TRGKIVVTI  325 (325)
T ss_pred             ccceEEEEC
Confidence            55 888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.95  E-value=7.7e-26  Score=206.84  Aligned_cols=272  Identities=19%  Similarity=0.223  Sum_probs=203.8

Q ss_pred             EeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            7 LISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         7 ~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      ++.+.|.++. ..+|.++| ||+ +|+|++  +++..+++||+|+.....                       .+...+ 
T Consensus        44 ~~~~~g~~~~~~~~~~~~g-~e~-~G~V~~--~~~~~~~~Gd~V~~~~~~-----------------------~~~~~~-   95 (324)
T cd08288          44 GLAITGKGGIVRTFPLVPG-IDL-AGTVVE--SSSPRFKPGDRVVLTGWG-----------------------VGERHW-   95 (324)
T ss_pred             HHHhcCCccccCCCCCccc-cce-EEEEEe--CCCCCCCCCCEEEECCcc-----------------------CCCCCC-
Confidence            3333444422 23578899 999 999998  777789999999863210                       011112 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHH--HhcCCC-CCCEEEEEcC-CH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW--KEAKVE-KGSSVAVLGL-GT  161 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~-~~~~VlI~G~-g~  161 (335)
                                       |+|++|+.++++.++++|+++++++++.++..+++++.++.  +..+.. ++++|||+|+ |+
T Consensus        96 -----------------g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~  158 (324)
T cd08288          96 -----------------GGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGG  158 (324)
T ss_pred             -----------------CcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcH
Confidence                             38999999999999999999999999999988999887653  224445 5789999997 99


Q ss_pred             HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822          162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE  241 (335)
Q Consensus       162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~  241 (335)
                      +|.+++++|+.+|+ +|++++.++++.+.++++|+++++++++   ..  ..++.++.+ ++|.++|++++. .+...+.
T Consensus       159 vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~--~~~~~~~~~-~~~~~~d~~~~~-~~~~~~~  230 (324)
T cd08288         159 VGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE---LS--EPGRPLQKE-RWAGAVDTVGGH-TLANVLA  230 (324)
T ss_pred             HHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch---hh--HhhhhhccC-cccEEEECCcHH-HHHHHHH
Confidence            99999999999999 8999998999999999999999998875   22  245555554 689999999975 5678888


Q ss_pred             hhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822          242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK  318 (335)
Q Consensus       242 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e  318 (335)
                      .+..+ |+++.+|.......+.+...+..+++++.+........   .+.+..+.+++.++.+.+   +++.++++++++
T Consensus       231 ~~~~~-g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~  306 (324)
T cd08288         231 QTRYG-GAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPD  306 (324)
T ss_pred             HhcCC-CEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHH
Confidence            88887 99999987532223344455546899999875322211   123555667777777543   357899999999


Q ss_pred             HHHHhcCCCee-eEEEeC
Q 019822          319 AIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       319 a~~~~~~~~~~-k~vi~~  335 (335)
                      |++.+.+++.. |+++++
T Consensus       307 a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         307 AAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             HHHHHhcCCccCeEEEeC
Confidence            99999887765 888764

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.95  E-value=7.9e-26  Score=205.72  Aligned_cols=258  Identities=26%  Similarity=0.403  Sum_probs=211.8

Q ss_pred             ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeec
Q 019822           19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH   98 (335)
Q Consensus        19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~   98 (335)
                      .|.++| ||+ +|+|+.+|+++..+++||+|+...                             ..              
T Consensus        57 ~~~~~g-~e~-~G~v~~~g~~~~~~~~G~~V~~~~-----------------------------~~--------------   91 (323)
T cd08241          57 LPFVPG-SEV-AGVVEAVGEGVTGFKVGDRVVALT-----------------------------GQ--------------   91 (323)
T ss_pred             CCCccc-cee-EEEEEEeCCCCCCCCCCCEEEEec-----------------------------CC--------------
Confidence            366899 999 999999999999999999997532                             11              


Q ss_pred             ccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822           99 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK  177 (335)
Q Consensus        99 ~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~  177 (335)
                          |++++|+.++.+.++++|+++++.+++.+...+.+|++++.+...+.++++|+|+|+ |.+|++++++++..|+ +
T Consensus        92 ----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~  166 (323)
T cd08241          92 ----GGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-R  166 (323)
T ss_pred             ----ceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-E
Confidence                279999999999999999999998888888899999998877788999999999997 9999999999999999 8


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      |+++++++++.+.++++|++.+++...   .++...+.+.++++++|+++|++|+. .+..++++++++ |+++.++...
T Consensus       167 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~-g~~v~~~~~~  241 (323)
T cd08241         167 VIAAASSEEKLALARALGADHVIDYRD---PDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWG-GRLLVIGFAS  241 (323)
T ss_pred             EEEEeCCHHHHHHHHHcCCceeeecCC---ccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccC-CEEEEEccCC
Confidence            999999999999999999888888776   67778888888877899999999985 778999999997 9999998754


Q ss_pred             CccccchhHHHhhcCcEEEEeeccCCCC------cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-e
Q 019822          258 DAMVPLNVIALACGGRTLKGTTFGGIKT------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-K  330 (335)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k  330 (335)
                      .....+.......+++++.+.....+..      ...+..+++++.++.+.+  ..++.+++++++++++.+.+++.. |
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (323)
T cd08241         242 GEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGK  319 (323)
T ss_pred             CCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCc
Confidence            3111133333455888888876544321      134567888898888653  366789999999999988876654 7


Q ss_pred             EEE
Q 019822          331 VLI  333 (335)
Q Consensus       331 ~vi  333 (335)
                      +++
T Consensus       320 vvv  322 (323)
T cd08241         320 VVL  322 (323)
T ss_pred             EEe
Confidence            765

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.94  E-value=9.6e-26  Score=208.44  Aligned_cols=256  Identities=21%  Similarity=0.214  Sum_probs=195.5

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+++|+++.+|++||+|+..+.                          ...              
T Consensus        72 ~~p~~~G-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~~--------------------------~~~--------------  109 (350)
T cd08248          72 EFPLTLG-RDC-SGVVVDIGSGVKSFEIGDEVWGAVP--------------------------PWS--------------  109 (350)
T ss_pred             CCCeeec-cee-EEEEEecCCCcccCCCCCEEEEecC--------------------------CCC--------------
Confidence            4588999 999 9999999999999999999975421                          011              


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCC----CCEEEEEcC-CHHHHHHHHHHHH
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK----GSSVAVLGL-GTVGLGAVDGARM  172 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~----~~~VlI~G~-g~vG~~ai~la~~  172 (335)
                          .|+|++|+.++++.++++|++++++.++.+++.+.|||+++.+...+.+    +++|+|+|+ |++|++++++|+.
T Consensus       110 ----~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~  185 (350)
T cd08248         110 ----QGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKA  185 (350)
T ss_pred             ----CccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHH
Confidence                1389999999999999999999999999999999999998877777654    999999986 9999999999999


Q ss_pred             cCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEE
Q 019822          173 HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV  252 (335)
Q Consensus       173 ~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~  252 (335)
                      +|+ +|+++.++ ++.+.++++|++++++.+.   .++...+..   +.++|+++|++|++ .+..++++++++ |+++.
T Consensus       186 ~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~---~~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~  255 (350)
T cd08248         186 WGA-HVTTTCST-DAIPLVKSLGADDVIDYNN---EDFEEELTE---RGKFDVILDTVGGD-TEKWALKLLKKG-GTYVT  255 (350)
T ss_pred             CCC-eEEEEeCc-chHHHHHHhCCceEEECCC---hhHHHHHHh---cCCCCEEEECCChH-HHHHHHHHhccC-CEEEE
Confidence            999 88888754 6778889999988888765   455554443   35899999999987 789999999997 99999


Q ss_pred             EccCCC---ccccc---------hhHHHhhc----CcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhH
Q 019822          253 IGVGVD---AMVPL---------NVIALACG----GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI  316 (335)
Q Consensus       253 ~g~~~~---~~~~~---------~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~  316 (335)
                      ++....   ....+         ....+..+    ...+.... .. .....+..+++++.++.+.+  .+++.++++++
T Consensus       256 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~  331 (350)
T cd08248         256 LVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF-FS-PSGSALDELAKLVEDGKIKP--VIDKVFPFEEV  331 (350)
T ss_pred             ecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE-EC-CCHHHHHHHHHHHhCCCEec--ccceeecHHHH
Confidence            985432   11111         00111000    11010000 01 12346788999999998654  36788999999


Q ss_pred             HHHHHHhcCCCee-eEEE
Q 019822          317 DKAIQLLKQPDCV-KVLI  333 (335)
Q Consensus       317 ~ea~~~~~~~~~~-k~vi  333 (335)
                      +++++.+.+++.. |+++
T Consensus       332 ~~a~~~~~~~~~~~~vv~  349 (350)
T cd08248         332 PEAYEKVESGHARGKTVI  349 (350)
T ss_pred             HHHHHHHhcCCCceEEEe
Confidence            9999998877654 7775

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.94  E-value=9e-26  Score=206.93  Aligned_cols=263  Identities=22%  Similarity=0.262  Sum_probs=198.6

Q ss_pred             EeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCc
Q 019822            9 SFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS   87 (335)
Q Consensus         9 ~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~   87 (335)
                      ...|.++. ..+|.++| ||+ +|+|+++|+++..|++||+|....                             ..   
T Consensus        46 ~~~g~~~~~~~~~~~~g-~e~-~G~v~~vG~~v~~~~~Gd~V~~~~-----------------------------~~---   91 (331)
T cd08273          46 MRRGLYPDQPPLPFTPG-YDL-VGRVDALGSGVTGFEVGDRVAALT-----------------------------RV---   91 (331)
T ss_pred             HhCCCCCCCCCCCcccc-cce-EEEEEEeCCCCccCCCCCEEEEeC-----------------------------CC---
Confidence            33454433 24678999 999 999999999999999999997532                             11   


Q ss_pred             cccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHH
Q 019822           88 RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGA  166 (335)
Q Consensus        88 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~a  166 (335)
                                     |++++|+.++.+.++++|+++++++++.+++++.+||+++.+...+.++++|+|+|+ |.+|+++
T Consensus        92 ---------------g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~  156 (331)
T cd08273          92 ---------------GGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQAL  156 (331)
T ss_pred             ---------------cceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHH
Confidence                           289999999999999999999999999999999999999877788999999999987 9999999


Q ss_pred             HHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccC
Q 019822          167 VDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG  246 (335)
Q Consensus       167 i~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~  246 (335)
                      +++|+..|+ +|+.++. +++.+.++++|+.. ++.+.   .++...  +..+ +++|+++|++++. .+..++++++.+
T Consensus       157 ~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~~---~~~~~~--~~~~-~~~d~vl~~~~~~-~~~~~~~~l~~~  226 (331)
T cd08273         157 LELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYRT---KDWLPA--MLTP-GGVDVVFDGVGGE-SYEESYAALAPG  226 (331)
T ss_pred             HHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCCC---cchhhh--hccC-CCceEEEECCchH-HHHHHHHHhcCC
Confidence            999999999 8999987 88888889999754 44443   344333  3333 3899999999988 478999999997


Q ss_pred             CeEEEEEccCCC-cc--ccchhH------------HHhhcCcEEEEeeccCC----CCcCcHHHHHHHHhCCCCCCCCce
Q 019822          247 KGKVIVIGVGVD-AM--VPLNVI------------ALACGGRTLKGTTFGGI----KTKSDLPTLLDKCKNKEFKLHQLL  307 (335)
Q Consensus       247 ~G~~v~~g~~~~-~~--~~~~~~------------~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~  307 (335)
                       |+++.+|.... ..  .++++.            ....++..+........    ...+.+..+++++.++.+.+  .+
T Consensus       227 -g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~  303 (331)
T cd08273         227 -GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KI  303 (331)
T ss_pred             -CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--Cc
Confidence             99999987654 11  111110            11112223322221000    01245778889999998764  36


Q ss_pred             eEEeechhHHHHHHHhcCCCee-eEEE
Q 019822          308 THHVKLEEIDKAIQLLKQPDCV-KVLI  333 (335)
Q Consensus       308 ~~~~~l~~~~ea~~~~~~~~~~-k~vi  333 (335)
                      ++.+++++++++++.+.+++.. |+++
T Consensus       304 ~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         304 AKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             ceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            6789999999999998877654 6664

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.94  E-value=3.9e-25  Score=202.87  Aligned_cols=259  Identities=22%  Similarity=0.287  Sum_probs=206.0

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      ..|.++| ||+ +|+|+.+|+++.++++||+|+...                             .+             
T Consensus        55 ~~~~~~g-~e~-~G~v~~~g~~~~~~~~G~~V~~~~-----------------------------~~-------------   90 (337)
T cd08275          55 KPPFVPG-FEC-AGTVEAVGEGVKDFKVGDRVMGLT-----------------------------RF-------------   90 (337)
T ss_pred             CCCCCCc-cee-EEEEEEECCCCcCCCCCCEEEEec-----------------------------CC-------------
Confidence            4577899 999 999999999999999999997531                             11             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHc-CC
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMH-GA  175 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~-G~  175 (335)
                           |++++|+.++.+.++++|+++++.+++.+++++.++|+++.+...+.++++|+|+|+ |.+|++++++|+.+ +.
T Consensus        91 -----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~  165 (337)
T cd08275          91 -----GGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV  165 (337)
T ss_pred             -----CeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc
Confidence                 289999999999999999999999999999999999999888888999999999997 99999999999998 43


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          176 AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       176 ~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                       .++... ++++.+.++++|++.+++.+.   .++...+++.++ +++|+++|++|+. ....++++++++ |+++.+|.
T Consensus       166 -~~~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~-~~~d~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~  237 (337)
T cd08275         166 -TVVGTA-SASKHEALKENGVTHVIDYRT---QDYVEEVKKISP-EGVDIVLDALGGE-DTRKSYDLLKPM-GRLVVYGA  237 (337)
T ss_pred             -EEEEeC-CHHHHHHHHHcCCcEEeeCCC---CcHHHHHHHHhC-CCceEEEECCcHH-HHHHHHHhhccC-cEEEEEee
Confidence             333332 455788888899988888876   678788887775 5899999999987 678999999997 99999986


Q ss_pred             CCC-c--cc-------------cchhHHHhhcCcEEEEeeccCCCCc-----CcHHHHHHHHhCCCCCCCCceeEEeech
Q 019822          256 GVD-A--MV-------------PLNVIALACGGRTLKGTTFGGIKTK-----SDLPTLLDKCKNKEFKLHQLLTHHVKLE  314 (335)
Q Consensus       256 ~~~-~--~~-------------~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~l~  314 (335)
                      ... .  ..             .+.......+++++.+.........     ..+..+++++.++.+.+.  .++.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  315 (337)
T cd08275         238 ANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFE  315 (337)
T ss_pred             cCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHH
Confidence            543 1  11             1222344568888888765432111     135668888888886543  56789999


Q ss_pred             hHHHHHHHhcCCCee-eEEEeC
Q 019822          315 EIDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       315 ~~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      +++++++.+.+++.. |+++++
T Consensus       316 ~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         316 EVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHHHHcCCCcceEEEeC
Confidence            999999999877655 888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.94  E-value=3.2e-25  Score=200.64  Aligned_cols=249  Identities=21%  Similarity=0.241  Sum_probs=199.0

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+.+|+++..+++||+|+.....                          ..+             
T Consensus        58 ~~~~~~g-~e~-~G~v~~~G~~~~~~~~G~~V~~~~~~--------------------------~~~-------------   96 (309)
T cd05289          58 TLPLIPG-HDV-AGVVVAVGPGVTGFKVGDEVFGMTPF--------------------------TRG-------------   96 (309)
T ss_pred             CCCCccc-cce-eEEEEeeCCCCCCCCCCCEEEEccCC--------------------------CCC-------------
Confidence            4578999 999 99999999999999999999754310                          001             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAA  176 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~  176 (335)
                           |++++|+.++...++++|+++++..++.+++.+.++++++.+...+.++++|+|+|+ |.+|++++++++..|+ 
T Consensus        97 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-  170 (309)
T cd05289          97 -----GAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-  170 (309)
T ss_pred             -----CcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-
Confidence                 389999999999999999999999999898899999998877677999999999997 9999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +|++++.++ +.+.++++|++.+++.+.   .++..    .+.++++|+++|++++. ....++++++++ |+++.++..
T Consensus       171 ~v~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~  240 (309)
T cd05289         171 RVIATASAA-NADFLRSLGADEVIDYTK---GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGP  240 (309)
T ss_pred             EEEEEecch-hHHHHHHcCCCEEEeCCC---Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCC
Confidence            888888777 888888899888887765   44433    34455899999999988 779999999997 999999875


Q ss_pred             CCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEE
Q 019822          257 VDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVL  332 (335)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~v  332 (335)
                      .. ...    ....+++.+....+...  ...+..++++++++.+.+  ++++.+++++++++++.+..++.. |++
T Consensus       241 ~~-~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv  308 (309)
T cd05289         241 PP-AEQ----AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVV  308 (309)
T ss_pred             Cc-chh----hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence            43 111    22235566655543211  356888999999988543  367889999999999998876654 665

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.93  E-value=1.6e-24  Score=197.27  Aligned_cols=254  Identities=24%  Similarity=0.261  Sum_probs=193.1

Q ss_pred             ccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeec
Q 019822           19 FILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYH   98 (335)
Q Consensus        19 ~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~   98 (335)
                      .|.++| ||+ +|+|+++|+++..+++||+|+.....                          ..+              
T Consensus        58 ~~~~~g-~e~-~G~v~~~G~~v~~~~~Gd~V~~~~~~--------------------------~~~--------------   95 (319)
T cd08267          58 FPPIPG-MDF-AGEVVAVGSGVTRFKVGDEVFGRLPP--------------------------KGG--------------   95 (319)
T ss_pred             CCCccc-cee-eEEEEEeCCCCCCCCCCCEEEEeccC--------------------------CCC--------------
Confidence            467899 999 99999999999999999999754210                          011              


Q ss_pred             ccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCE
Q 019822           99 IFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAK  177 (335)
Q Consensus        99 ~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~  177 (335)
                          |++++|+.++.+.++++|+++++++++.+++.+.+||+++.+...+.++++|+|+|+ |++|++++++|+.+|+ +
T Consensus        96 ----g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~  170 (319)
T cd08267          96 ----GALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-H  170 (319)
T ss_pred             ----ceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-E
Confidence                389999999999999999999999999999999999999877777999999999997 9999999999999999 8


Q ss_pred             EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccCCeEEEEEccC
Q 019822          178 IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       178 V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      |++++++ ++.+.++++|++++++.+.   .++.   +..+.++++|+++||+++. ......+..++++ |+++.+|..
T Consensus       171 v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~  242 (319)
T cd08267         171 VTGVCST-RNAELVRSLGADEVIDYTT---EDFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGG  242 (319)
T ss_pred             EEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccc
Confidence            9998865 8888889999988888765   3443   4455666899999999853 2333444458897 999999876


Q ss_pred             CC-ccccc---hhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eE
Q 019822          257 VD-AMVPL---NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KV  331 (335)
Q Consensus       257 ~~-~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~  331 (335)
                      .. .....   ...... ....+.......  ..+.+..+++++.++++.+  ++++.++++++++|++.+.+++.. |+
T Consensus       243 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~v  317 (319)
T cd08267         243 PSGLLLVLLLLPLTLGG-GGRRLKFFLAKP--NAEDLEQLAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKV  317 (319)
T ss_pred             cccccccccccchhhcc-ccceEEEEEecC--CHHHHHHHHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcE
Confidence            53 11111   111111 222222222111  1456888999999988654  467889999999999999876654 66


Q ss_pred             E
Q 019822          332 L  332 (335)
Q Consensus       332 v  332 (335)
                      +
T Consensus       318 v  318 (319)
T cd08267         318 V  318 (319)
T ss_pred             e
Confidence            5

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.92  E-value=2e-23  Score=178.95  Aligned_cols=247  Identities=23%  Similarity=0.248  Sum_probs=193.9

Q ss_pred             ccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeecccccccce
Q 019822           27 KVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWS  106 (335)
Q Consensus        27 e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~~  106 (335)
                      .+ +|+|++.  +...+++||.|+..                             .                     +|.
T Consensus        78 ~G-V~kVi~S--~~~~~~~GD~v~g~-----------------------------~---------------------gWe  104 (343)
T KOG1196|consen   78 FG-VAKVIDS--GHPNYKKGDLVWGI-----------------------------V---------------------GWE  104 (343)
T ss_pred             Cc-eEEEEec--CCCCCCcCceEEEe-----------------------------c---------------------cce
Confidence            45 8999995  45779999999632                             1                     689


Q ss_pred             eeEEeccc--ceEEcCC--CCCccc-ccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEE
Q 019822          107 EYMVIDAN--YVVKVDP--SIDPSD-ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIG  180 (335)
Q Consensus       107 ~~~~v~~~--~~~~lp~--~~~~~~-aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~  180 (335)
                      ||..++..  ..+++|.  +.++.. ..++..+..|||..+++....+++++|+|-|| |++|+++.|+|+.+|+ +|++
T Consensus       105 eysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVG  183 (343)
T KOG1196|consen  105 EYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVG  183 (343)
T ss_pred             EEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEE
Confidence            99988764  3444443  333333 23356688999999999999999999999987 9999999999999999 9999


Q ss_pred             EcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-
Q 019822          181 IDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-  258 (335)
Q Consensus       181 ~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-  258 (335)
                      ++.++||...++ ++|.+..+||++  +.+..+.+++.... |+|+.||.+|+. .++..+..+... ||++.+|..+. 
T Consensus       184 saGS~EKv~ll~~~~G~d~afNYK~--e~~~~~aL~r~~P~-GIDiYfeNVGG~-~lDavl~nM~~~-gri~~CG~ISqY  258 (343)
T KOG1196|consen  184 SAGSKEKVDLLKTKFGFDDAFNYKE--ESDLSAALKRCFPE-GIDIYFENVGGK-MLDAVLLNMNLH-GRIAVCGMISQY  258 (343)
T ss_pred             ecCChhhhhhhHhccCCccceeccC--ccCHHHHHHHhCCC-cceEEEeccCcH-HHHHHHHhhhhc-cceEeeeeehhc
Confidence            999999999984 579999999998  33788888887665 999999999998 889999999997 99999997764 


Q ss_pred             -ccccc---hhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eE
Q 019822          259 -AMVPL---NVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KV  331 (335)
Q Consensus       259 -~~~~~---~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~  331 (335)
                       .+.+.   +...++.+++.+.|+.+.++.  ..+.++.+..++++|+++...-+.  -.|+..++||.-|.+++.. |.
T Consensus       259 N~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~--~Glen~P~A~vglf~GkNvGKq  336 (343)
T KOG1196|consen  259 NLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIA--DGLENGPSALVGLFHGKNVGKQ  336 (343)
T ss_pred             cccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHH--HHHhccHHHHHHHhccCcccce
Confidence             12222   234456799999997765542  234467788889999988664443  3699999999999888765 87


Q ss_pred             EEe
Q 019822          332 LIT  334 (335)
Q Consensus       332 vi~  334 (335)
                      ++.
T Consensus       337 iv~  339 (343)
T KOG1196|consen  337 LVK  339 (343)
T ss_pred             EEE
Confidence            765

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.78  E-value=2.8e-18  Score=135.81  Aligned_cols=129  Identities=30%  Similarity=0.471  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      ++|++++|+|+++|+ +|+++++++++++.++++|+++++++++   .++.+.++++++++++|+||||+|+...++.++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~   76 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI   76 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence            589999999999996 9999999999999999999999999998   789999999999889999999999877999999


Q ss_pred             HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHh
Q 019822          241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCK  297 (335)
Q Consensus       241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~  297 (335)
                      ++++++ |+++.+|.......+++...++.+++++.|+..++   +++++++++++.
T Consensus        77 ~~l~~~-G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la  129 (130)
T PF00107_consen   77 KLLRPG-GRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA  129 (130)
T ss_dssp             HHEEEE-EEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred             HHhccC-CEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence            999998 99999999875678889999999999999998655   578888888875

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.70  E-value=1.1e-17  Score=128.31  Aligned_cols=92  Identities=33%  Similarity=0.427  Sum_probs=78.9

Q ss_pred             EEeEeecC-CCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALK-DSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~-~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|. .+...+|.++| ||+ +|+|+++|++++.|++||+|++.+...|+.|++|+.+.++.|.+...  +|+..+
T Consensus        17 D~~~~~g~~~~~~~~p~i~G-hE~-~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~--~g~~~~   92 (109)
T PF08240_consen   17 DLHIREGGPPPPPKFPLILG-HEG-VGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEV--LGLGLD   92 (109)
T ss_dssp             HHHHHTTSSSSTSSSSEES--SEE-EEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEE--TTTSST
T ss_pred             HHHHHhhccccCCCCCcccc-cce-eeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCE--eEcCCC
Confidence            55666673 44468999999 999 99999999999999999999999988899999999999999988776  466666


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEc
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKV  119 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l  119 (335)
                      |                  +|+||+.+|+++++|+
T Consensus        93 G------------------~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   93 G------------------GFAEYVVVPARNLVPV  109 (109)
T ss_dssp             C------------------SSBSEEEEEGGGEEEE
T ss_pred             C------------------cccCeEEEehHHEEEC
Confidence            6                  9999999999999985

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.49  E-value=1.7e-12  Score=120.51  Aligned_cols=174  Identities=21%  Similarity=0.226  Sum_probs=136.1

Q ss_pred             hHHHHHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhh
Q 019822          139 YGAAWKEAKV-EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       139 ~~~l~~~~~~-~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      +.++.+..++ .+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+.+.++++|++.+.         ..+.+   
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~---------~~e~v---  255 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT---------MEEAV---  255 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc---------HHHHH---
Confidence            4445454443 689999999999999999999999999 899999999999999999984321         11122   


Q ss_pred             hCCCCccEEEEcCCChHHHHHH-HHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHH--HHHH
Q 019822          218 THGMGVDYCFECTGVPSLLSEA-LETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLP--TLLD  294 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~  294 (335)
                         +++|+||+|+|....+... ++.++++ |+++.+|..   ..+++...+..+++++.++....  ...+++  ..+.
T Consensus       256 ---~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~---~~eId~~~L~~~el~i~g~~~~~--~~~~~~~g~aI~  326 (413)
T cd00401         256 ---KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQV--DRYELPDGRRII  326 (413)
T ss_pred             ---cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC---CCccCHHHHHhhccEEEEccCCc--ceEEcCCcchhh
Confidence               2689999999998777765 9999997 999999864   45677777887888888775321  122455  7999


Q ss_pred             HHhCCCC-CCCCceeEE-----eech-hHHHHHHHhcCCCe--eeEEEe
Q 019822          295 KCKNKEF-KLHQLLTHH-----VKLE-EIDKAIQLLKQPDC--VKVLIT  334 (335)
Q Consensus       295 ~i~~~~~-~~~~~~~~~-----~~l~-~~~ea~~~~~~~~~--~k~vi~  334 (335)
                      ++.+|++ ++...++|.     ++|+ |+.++++.+.+++.  .|+++.
T Consensus       327 LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~  375 (413)
T cd00401         327 LLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFL  375 (413)
T ss_pred             hhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence            9999998 888888888     8899 99999998887654  376654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.38  E-value=7.8e-12  Score=119.03  Aligned_cols=155  Identities=21%  Similarity=0.281  Sum_probs=115.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCC----------chhHHHHHHh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEP----------NKSISELVKG  216 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~----------~~~~~~~i~~  216 (335)
                      ..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+..          ..++.+..++
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4579999999999999999999999999 89999999999999999999854 5543200          0133333333


Q ss_pred             h-hC-CCCccEEEEcCCCh-----HH-HHHHHHhhccCCeEEEEEccCCCc--cccchhHHHhh-cCcEEEEeeccCCCC
Q 019822          217 I-TH-GMGVDYCFECTGVP-----SL-LSEALETTKVGKGKVIVIGVGVDA--MVPLNVIALAC-GGRTLKGTTFGGIKT  285 (335)
Q Consensus       217 ~-~~-g~g~d~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~--~~~~~~~~~~~-~~~~~~g~~~~~~~~  285 (335)
                      . .+ .+++|+||+|++.+     .+ .+..++.++++ |++++++...+.  ..+.+...++. +++++.|..  ++  
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~--n~--  315 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYT--DL--  315 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeC--CC--
Confidence            3 22 14799999999863     24 48999999998 999999985432  34555555664 789999876  22  


Q ss_pred             cCcHH-HHHHHHhCCCCCCCCcee
Q 019822          286 KSDLP-TLLDKCKNKEFKLHQLLT  308 (335)
Q Consensus       286 ~~~~~-~~~~~i~~~~~~~~~~~~  308 (335)
                      +..+. ++.+++.++.+++.++++
T Consensus       316 P~~~p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        316 PSRLPTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             chhHHHHHHHHHHhCCccHHHHhc
Confidence            23454 588999988877666655

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.29  E-value=2.7e-12  Score=100.96  Aligned_cols=120  Identities=24%  Similarity=0.324  Sum_probs=77.1

Q ss_pred             cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC--ChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhc
Q 019822          194 FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG--VPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG  271 (335)
Q Consensus       194 lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~  271 (335)
                      |||++|+||++   .++       ++..++|+|||++|  ++..+..++++| ++ |+++.++.      .........+
T Consensus         1 LGAd~vidy~~---~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~------~~~~~~~~~~   62 (127)
T PF13602_consen    1 LGADEVIDYRD---TDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG------DLPSFARRLK   62 (127)
T ss_dssp             CT-SEEEETTC---SHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S------HHHHHHHHHH
T ss_pred             CCcCEEecCCC---ccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC------cccchhhhhc
Confidence            68999999987   666       44458999999999  654446777788 97 99999974      1111111112


Q ss_pred             CcEEEEeeccCCC----CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEEE
Q 019822          272 GRTLKGTTFGGIK----TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLI  333 (335)
Q Consensus       272 ~~~~~g~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi  333 (335)
                      ...+....+....    ..+.++.+.+++.+|++++.  +.++|||+++.+|++.+++++.. |+||
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            2222322222110    23458999999999997765  88899999999999999998875 9886

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.55  E-value=3.9e-07  Score=81.32  Aligned_cols=162  Identities=20%  Similarity=0.245  Sum_probs=100.0

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhc----CCceEeCCCCCCchhHHHHHHhhh-
Q 019822          145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~-  218 (335)
                      .+.+.++++||.+|+|+ |..++++++..|.. +|++++.+++..+.+++.    +...+-...    .+    +.++. 
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~----~d----~~~l~~  142 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL----GE----IEALPV  142 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE----cc----hhhCCC
Confidence            36688999999999987 88888888887753 799999999998888653    332221011    11    22221 


Q ss_pred             CCCCccEEEEcC------CChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHH
Q 019822          219 HGMGVDYCFECT------GVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTL  292 (335)
Q Consensus       219 ~g~g~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  292 (335)
                      ....||+|+...      .....++.+.+.|+++ |+++..+......  ++ ..+ .+...+.+...+.   .....+.
T Consensus       143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~~--~~-~~~-~~~~~~~~~~~~~---~~~~~e~  214 (272)
T PRK11873        143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRGE--LP-EEI-RNDAELYAGCVAG---ALQEEEY  214 (272)
T ss_pred             CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccCC--CC-HHH-HHhHHHHhccccC---CCCHHHH
Confidence            123799998532      2345789999999998 9999876554321  11 111 1222222222221   2345556


Q ss_pred             HHHHhCCCCC-CCCceeEEeechhHHHHHHHh
Q 019822          293 LDKCKNKEFK-LHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       293 ~~~i~~~~~~-~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      .+++++..+. ......+.++++++.++++.+
T Consensus       215 ~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~  246 (272)
T PRK11873        215 LAMLAEAGFVDITIQPKREYRIPDAREFLEDW  246 (272)
T ss_pred             HHHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence            6666664333 222244567899999999988

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.55  E-value=9.7e-07  Score=84.29  Aligned_cols=108  Identities=20%  Similarity=0.313  Sum_probs=82.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCC----------CCchhHHHHHHhh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDD----------EPNKSISELVKGI  217 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~----------~~~~~~~~~i~~~  217 (335)
                      .++++|+|+|+|.+|++++++++.+|+ +|+++++++++++.++++|++.+ ++..+          +...++.+..+++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467899999999999999999999999 89999999999999999998763 33211          0012344434443


Q ss_pred             hC--CCCccEEEEcC---CChH---HHHHHHHhhccCCeEEEEEccCCC
Q 019822          218 TH--GMGVDYCFECT---GVPS---LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       218 ~~--g~g~d~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      +.  .+++|++|+|+   |.+.   ..+...+.++++ +.+++++...+
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G  288 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG  288 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence            33  35799999999   6533   456789999998 99999986655

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.45  E-value=1.6e-08  Score=95.47  Aligned_cols=159  Identities=14%  Similarity=0.156  Sum_probs=105.4

Q ss_pred             ccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeeccccc
Q 019822           23 FSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSC  102 (335)
Q Consensus        23 ~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~  102 (335)
                      -| .|+ ++.+.+|++++..     +|++-+.. ||+|.+|    ++.|.+...  .|...++                 
T Consensus        90 ~~-~~a-~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~--~g~~l~~-----------------  138 (417)
T TIGR01035        90 TG-ESA-VEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT--VGKVLER-----------------  138 (417)
T ss_pred             Cc-hHH-HHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC--chHHHHH-----------------
Confidence            46 888 9999999998766     66666666 9999999    566665544  3545554                 


Q ss_pred             ccceeeEEecccceEEcCCCCCcccccccccchhhhhHHH---HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEE
Q 019822          103 STWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAA---WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKII  179 (335)
Q Consensus       103 g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l---~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~  179 (335)
                       .|++++.++. .+.. .-.++       ..+.+.++.++   .+..+..++++|+|+|+|.+|..+++.++..|+.+|+
T Consensus       139 -lf~~a~~~~k-~vr~-~t~i~-------~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~  208 (417)
T TIGR01035       139 -LFQKAFSVGK-RVRT-ETDIS-------AGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKIL  208 (417)
T ss_pred             -HHHHHHHHhh-hhhh-hcCCC-------CCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEE
Confidence             7999988876 2221 00111       11122222222   2333456789999999999999999999999966999


Q ss_pred             EEcCChhhHH-HHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH
Q 019822          180 GIDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS  234 (335)
Q Consensus       180 ~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~  234 (335)
                      ++.++.++.+ +++++|.. .++.     .+.    .+...  ++|+||+|++.+.
T Consensus       209 v~~rs~~ra~~la~~~g~~-~i~~-----~~l----~~~l~--~aDvVi~aT~s~~  252 (417)
T TIGR01035       209 IANRTYERAEDLAKELGGE-AVKF-----EDL----EEYLA--EADIVISSTGAPH  252 (417)
T ss_pred             EEeCCHHHHHHHHHHcCCe-EeeH-----HHH----HHHHh--hCCEEEECCCCCC
Confidence            9999988754 56777753 2221     112    22222  6899999998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.31  E-value=1.6e-05  Score=71.66  Aligned_cols=95  Identities=19%  Similarity=0.243  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+++++|+|.|.+|+++++.++.+|+ +|+++++++++.+.++++|++.+ ...         .+.+...  ++|+||+|
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~~---------~l~~~l~--~aDiVI~t  217 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HLS---------ELAEEVG--KIDIIFNT  217 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cHH---------HHHHHhC--CCCEEEEC
Confidence            68999999999999999999999999 99999999998888888886532 111         2223222  58999999


Q ss_pred             CCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          230 TGVPSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      ++....-...++.++++ +.+++++...+
T Consensus       218 ~p~~~i~~~~l~~~~~g-~vIIDla~~pg  245 (296)
T PRK08306        218 IPALVLTKEVLSKMPPE-ALIIDLASKPG  245 (296)
T ss_pred             CChhhhhHHHHHcCCCC-cEEEEEccCCC
Confidence            87653445677888997 99999987664

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.30  E-value=2e-05  Score=73.93  Aligned_cols=103  Identities=24%  Similarity=0.285  Sum_probs=77.9

Q ss_pred             hhHHHHHhcCCC-CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHh
Q 019822          138 GYGAAWKEAKVE-KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKG  216 (335)
Q Consensus       138 a~~~l~~~~~~~-~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~  216 (335)
                      .|.++.+..++. .+++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. +.+        +.+.+  
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~--------l~eal--  265 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT--------MEEAA--  265 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC--------HHHHH--
Confidence            344443333544 89999999999999999999999999 999999988887666666754 221        21122  


Q ss_pred             hhCCCCccEEEEcCCChHHHH-HHHHhhccCCeEEEEEccCC
Q 019822          217 ITHGMGVDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~  257 (335)
                        .  ++|+||+++|....+. ..+..++++ +.++.+|...
T Consensus       266 --~--~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d  302 (425)
T PRK05476        266 --E--LGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD  302 (425)
T ss_pred             --h--CCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence              1  6899999999886676 678888897 8888888765

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.19  E-value=2.2e-05  Score=69.18  Aligned_cols=134  Identities=21%  Similarity=0.277  Sum_probs=83.3

Q ss_pred             cceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhc-CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc
Q 019822          104 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID  182 (335)
Q Consensus       104 ~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~  182 (335)
                      +|.+|.. +...++.+++++++..+.- +   .|. .++.... ...++++||-+|+|+ |.+++.+++ .|+.+|++++
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h-~---tt~-~~l~~l~~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giD  149 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTH-P---TTR-LCLEALEKLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVD  149 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCC-H---HHH-HHHHHHHhhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEE
Confidence            4555544 6678899999988776542 1   121 1221111 256889999999987 888776555 6775799999


Q ss_pred             CChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCC-CccEEEEcCCCh---HHHHHHHHhhccCCeEEEEEccCC
Q 019822          183 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM-GVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       183 ~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~-g~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .++...+.+++.-...-+. ..         + .+..+. .||+|+......   ..++.+.+.|+++ |+++..+...
T Consensus       150 is~~~l~~A~~n~~~~~~~-~~---------~-~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~  216 (250)
T PRK00517        150 IDPQAVEAARENAELNGVE-LN---------V-YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE  216 (250)
T ss_pred             CCHHHHHHHHHHHHHcCCC-ce---------E-EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence            9998888775431100000 00         0 001111 589998665433   2456788889998 9999886543

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.15  E-value=4.2e-05  Score=71.35  Aligned_cols=102  Identities=25%  Similarity=0.297  Sum_probs=77.4

Q ss_pred             hHHHHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhh
Q 019822          139 YGAAWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       139 ~~~l~~~~~-~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      +.++.+..+ ...+++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...++..|+. +.+        ..+.+   
T Consensus       182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal---  248 (406)
T TIGR00936       182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA---  248 (406)
T ss_pred             HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH---
Confidence            334434334 3689999999999999999999999999 999999888887777777763 221        11122   


Q ss_pred             hCCCCccEEEEcCCChHHHH-HHHHhhccCCeEEEEEccCC
Q 019822          218 THGMGVDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~  257 (335)
                         ++.|++|+++|....++ ..+..++++ +.++.+|...
T Consensus       249 ---~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~  285 (406)
T TIGR00936       249 ---KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD  285 (406)
T ss_pred             ---hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence               25799999999987776 488888887 8888887754

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.14  E-value=1.3e-07  Score=89.58  Aligned_cols=159  Identities=14%  Similarity=0.135  Sum_probs=96.1

Q ss_pred             ccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeeccccc
Q 019822           23 FSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSC  102 (335)
Q Consensus        23 ~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~  102 (335)
                      -| ||. ++.+.+|+++....-+|+     +.. |++|..    .++.|.+...  .|...++                 
T Consensus        92 ~g-~ea-~~hl~~V~~GldS~V~GE-----~qI-lgQvk~----a~~~a~~~g~--~g~~l~~-----------------  140 (423)
T PRK00045         92 EG-EEA-VRHLFRVASGLDSMVLGE-----PQI-LGQVKD----AYALAQEAGT--VGTILNR-----------------  140 (423)
T ss_pred             CC-HHH-HHHHHHHHhhhhhhhcCC-----hHH-HHHHHH----HHHHHHHcCC--chHHHHH-----------------
Confidence            47 999 999999999887643333     333 555442    2233332222  1222222                 


Q ss_pred             ccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhc---CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEE
Q 019822          103 STWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA---KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKII  179 (335)
Q Consensus       103 g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~  179 (335)
                       .|++.+.++.        .+..+.+ ....+.++++.++....   +..++.+|+|+|+|.+|.++++.++..|+.+|+
T Consensus       141 -lf~~a~~~~k--------~v~~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~  210 (423)
T PRK00045        141 -LFQKAFSVAK--------RVRTETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKIT  210 (423)
T ss_pred             -HHHHHHHHHh--------hHhhhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEE
Confidence             5555554443        2221111 12224555566552221   235789999999999999999999999987899


Q ss_pred             EEcCChhhHH-HHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH
Q 019822          180 GIDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS  234 (335)
Q Consensus       180 ~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~  234 (335)
                      ++.++.++.+ +++++|.. +++..         .+.+...  ++|+||+|++.+.
T Consensus       211 v~~r~~~ra~~la~~~g~~-~~~~~---------~~~~~l~--~aDvVI~aT~s~~  254 (423)
T PRK00045        211 VANRTLERAEELAEEFGGE-AIPLD---------ELPEALA--EADIVISSTGAPH  254 (423)
T ss_pred             EEeCCHHHHHHHHHHcCCc-EeeHH---------HHHHHhc--cCCEEEECCCCCC
Confidence            9999988865 56777753 32221         1222222  6899999998763

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.12  E-value=1.5e-05  Score=72.55  Aligned_cols=108  Identities=23%  Similarity=0.282  Sum_probs=78.1

Q ss_pred             cceEEcCCCCCcccccccccchhhhhHHHHHhcCC----CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhH-
Q 019822          114 NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV----EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK-  188 (335)
Q Consensus       114 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~----~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~-  188 (335)
                      ...+++|+.+..+.+.... +.++++.++ +.+..    .++.+|+|+|+|.+|..+++.++..|..+|+++++++++. 
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~  216 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE  216 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            3567778888877777655 667777765 33332    4789999999999999999999988877999999998875 


Q ss_pred             HHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHH
Q 019822          189 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL  235 (335)
Q Consensus       189 ~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~  235 (335)
                      ++++++|+. +++..     ++.+.+    .  .+|+||.|++.+..
T Consensus       217 ~la~~~g~~-~~~~~-----~~~~~l----~--~aDvVi~at~~~~~  251 (311)
T cd05213         217 ELAKELGGN-AVPLD-----ELLELL----N--EADVVISATGAPHY  251 (311)
T ss_pred             HHHHHcCCe-EEeHH-----HHHHHH----h--cCCEEEECCCCCch
Confidence            566788873 32221     122222    1  58999999998744

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02494 adenosylhomocysteinase

Probab=97.99  E-value=8.8e-05  Score=69.99  Aligned_cols=102  Identities=20%  Similarity=0.277  Sum_probs=79.0

Q ss_pred             hHHHHHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhh
Q 019822          139 YGAAWKEAKV-EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       139 ~~~l~~~~~~-~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      +.++.+..++ ..+++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. +   .     ..+.++  
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v---~-----leEal~--  308 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L---T-----LEDVVS--  308 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c---c-----HHHHHh--
Confidence            4445454444 679999999999999999999999999 9999998888776776777642 1   1     222222  


Q ss_pred             hCCCCccEEEEcCCChHHH-HHHHHhhccCCeEEEEEccCC
Q 019822          218 THGMGVDYCFECTGVPSLL-SEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~  257 (335)
                          ..|+++++.|....+ ...++.++++ +.++-+|...
T Consensus       309 ----~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~  344 (477)
T PLN02494        309 ----EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHFD  344 (477)
T ss_pred             ----hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence                579999999987654 7899999997 9999998754

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.80  E-value=0.00023  Score=66.24  Aligned_cols=99  Identities=17%  Similarity=0.199  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+. .++.........   .   +.+.+...  ++|++|+
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~---~---~~l~~~l~--~aDvVI~  236 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN---A---YEIEDAVK--RADLLIG  236 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC---H---HHHHHHHc--cCCEEEE
Confidence            45669999999999999999999999 8999999988887764 455432222221   1   12333322  6899999


Q ss_pred             cCC---C--hH-HHHHHHHhhccCCeEEEEEccCCC
Q 019822          229 CTG---V--PS-LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       229 ~~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      |++   .  +. .....++.++++ +.+++++...+
T Consensus       237 a~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G  271 (370)
T TIGR00518       237 AVLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG  271 (370)
T ss_pred             ccccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence            973   2  21 136777888997 99999986555

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.77  E-value=0.0002  Score=60.20  Aligned_cols=116  Identities=17%  Similarity=0.243  Sum_probs=80.8

Q ss_pred             cccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh----hHHHHHhcCCceEeCC
Q 019822          127 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW----KKEKGKAFGMTDFINP  202 (335)
Q Consensus       127 ~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~----~~~~~~~lga~~v~~~  202 (335)
                      ..-.++-+...|.  +.+...++++++||=+|+|+ |+.++-|++..+  +|+.+++.++    ..+.++.+|...|.-.
T Consensus        51 ~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~  125 (209)
T COG2518          51 CGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVR  125 (209)
T ss_pred             CCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEE
Confidence            3334444545443  45778899999999999874 999999999888  8999998887    3344567886443222


Q ss_pred             CCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       203 ~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      +.    |   -.+.+.+...||.|+-+.+.+..-+.+++.|+++ |+++..-.
T Consensus       126 ~g----D---G~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG  170 (209)
T COG2518         126 HG----D---GSKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG  170 (209)
T ss_pred             EC----C---cccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence            21    1   1122334458999998777765667899999998 98876633

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.76  E-value=0.00063  Score=61.04  Aligned_cols=95  Identities=16%  Similarity=0.204  Sum_probs=70.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+++++|+|.|.+|.+++..++.+|+ +|+++++++++.+.+.+.|... +..     .    .+.+...  ++|+|+++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~-----~----~l~~~l~--~aDiVint  216 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL-----N----KLEEKVA--EIDIVINT  216 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH-----H----HHHHHhc--cCCEEEEC
Confidence            57899999999999999999999999 9999999988877777776532 111     1    1223222  68999999


Q ss_pred             CCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          230 TGVPSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      ++..-.-...++.++++ ..++.++...+
T Consensus       217 ~P~~ii~~~~l~~~k~~-aliIDlas~Pg  244 (287)
T TIGR02853       217 IPALVLTADVLSKLPKH-AVIIDLASKPG  244 (287)
T ss_pred             CChHHhCHHHHhcCCCC-eEEEEeCcCCC
Confidence            87652224566778886 88888877553

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.75  E-value=0.00028  Score=63.51  Aligned_cols=98  Identities=22%  Similarity=0.271  Sum_probs=64.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc-eEeCCCCCCchhHHHHHHhhhCCCC
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT-DFINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      ..++++||-+|+|+ |..++.+++ .|+.+|++++.++...+.+++.    +.. .+....    .+    ......+ +
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~----~~----~~~~~~~-~  225 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL----IY----LEQPIEG-K  225 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe----cc----cccccCC-C
Confidence            45789999999987 888777766 5766999999999887776542    211 111111    01    1112223 7


Q ss_pred             ccEEEEcCCCh---HHHHHHHHhhccCCeEEEEEccCC
Q 019822          223 VDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       223 ~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      ||+|+......   ..+..+.+.|+++ |+++..+...
T Consensus       226 fDlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~~  262 (288)
T TIGR00406       226 ADVIVANILAEVIKELYPQFSRLVKPG-GWLILSGILE  262 (288)
T ss_pred             ceEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCcH
Confidence            99999654332   3556778899997 9998877643

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.74  E-value=0.00014  Score=57.69  Aligned_cols=98  Identities=23%  Similarity=0.285  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc--eEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT--DFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~--~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      --++++++|+|+|++|.+++..+...|+++|+++.|+.++.+.+ ++++..  .+++..+     ..+.+.      .+|
T Consensus         9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~------~~D   77 (135)
T PF01488_consen    9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ------EAD   77 (135)
T ss_dssp             TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH------TES
T ss_pred             CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh------hCC
Confidence            44689999999999999999999999998899999999887765 455322  2333433     222221      689


Q ss_pred             EEEEcCCChH--HHHHHHHhhccCCeEEEEEccC
Q 019822          225 YCFECTGVPS--LLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       225 ~vid~~g~~~--~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +||+|++.+.  .....+.......+.+++++.+
T Consensus        78 ivI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   78 IVINATPSGMPIITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             EEEE-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred             eEEEecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence            9999988652  1123333332210366777654

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.70  E-value=0.00041  Score=65.68  Aligned_cols=101  Identities=22%  Similarity=0.316  Sum_probs=75.6

Q ss_pred             HHHHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhh
Q 019822          140 GAAWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       140 ~~l~~~~~-~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      .++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..+         ++.+.+    
T Consensus       242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~---------~leell----  307 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV---------TLEDVV----  307 (476)
T ss_pred             HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec---------cHHHHH----
Confidence            33444333 4579999999999999999999999999 99999887776655555565321         122222    


Q ss_pred             CCCCccEEEEcCCChHHHH-HHHHhhccCCeEEEEEccCC
Q 019822          219 HGMGVDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       219 ~g~g~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~  257 (335)
                        +..|+|+.++|....+. ..++.++++ +.++-+|...
T Consensus       308 --~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d  344 (476)
T PTZ00075        308 --ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD  344 (476)
T ss_pred             --hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence              15899999999876664 889999997 9999888764

>PRK08324 short chain dehydrogenase; Validated

Probab=97.61  E-value=0.0007  Score=68.36  Aligned_cols=139  Identities=18%  Similarity=0.236  Sum_probs=85.0

Q ss_pred             cceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 019822          104 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID  182 (335)
Q Consensus       104 ~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~  182 (335)
                      ++++|..+++..++.+ +..+.+++..-..          ......+++++||+|+ |.+|.++++.+...|+ +|++++
T Consensus       386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~  453 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD  453 (681)
T ss_pred             hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence            4667777777666666 4444444431100          0122346789999986 9999999999999999 999999


Q ss_pred             CChhhHHHH-HhcCC-----ceEeCCCCCCchhHHHHHHhhh--CCCCccEEEEcCCC----------------------
Q 019822          183 KNPWKKEKG-KAFGM-----TDFINPDDEPNKSISELVKGIT--HGMGVDYCFECTGV----------------------  232 (335)
Q Consensus       183 ~~~~~~~~~-~~lga-----~~v~~~~~~~~~~~~~~i~~~~--~g~g~d~vid~~g~----------------------  232 (335)
                      ++.++.+.+ ++++.     ....|-.+  .......+.+..  .+ ++|++|++.|.                      
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g-~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~  530 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFG-GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNA  530 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence            998876654 33432     11234333  122333333321  23 69999999982                      


Q ss_pred             ---hHHHHHHHHhhcc---CCeEEEEEccCCC
Q 019822          233 ---PSLLSEALETTKV---GKGKVIVIGVGVD  258 (335)
Q Consensus       233 ---~~~~~~~~~~l~~---~~G~~v~~g~~~~  258 (335)
                         ...++.+++.+..   + |+++.++....
T Consensus       531 ~g~~~l~~~~~~~l~~~~~~-g~iV~vsS~~~  561 (681)
T PRK08324        531 TGHFLVAREAVRIMKAQGLG-GSIVFIASKNA  561 (681)
T ss_pred             HHHHHHHHHHHHHHHhcCCC-cEEEEECCccc
Confidence               1123444555555   4 78998886543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.59  E-value=0.00052  Score=58.87  Aligned_cols=80  Identities=15%  Similarity=0.264  Sum_probs=59.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC----ceEeCCCCCCchhHHHHHHhhhCCC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM----TDFINPDDEPNKSISELVKGITHGM-G  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga----~~v~~~~~~~~~~~~~~i~~~~~g~-g  222 (335)
                      +++.++|+|+ +++|.+.++.+...|+ +|+.+.|+.++++.+ .+++.    ...+|-.+  .....+.+..+.... .
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~   81 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR   81 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence            4578899998 9999999999999999 999999999999887 56772    22345443  234445555444333 5


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++++..|.
T Consensus        82 iDiLvNNAGl   91 (246)
T COG4221          82 IDILVNNAGL   91 (246)
T ss_pred             ccEEEecCCC
Confidence            9999998874

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.56  E-value=0.00013  Score=72.03  Aligned_cols=80  Identities=21%  Similarity=0.236  Sum_probs=58.5

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC---------------------hhhHHHHHhcCCceEeCCCCC
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN---------------------PWKKEKGKAFGMTDFINPDDE  205 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~---------------------~~~~~~~~~lga~~v~~~~~~  205 (335)
                      ...++++|+|+|+|++|+++++.++..|+ +|++++..                     +.+++.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~-  210 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV-  210 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence            35688999999999999999999999999 89999842                     34566778899876665432 


Q ss_pred             CchhH-HHHHHhhhCCCCccEEEEcCCChH
Q 019822          206 PNKSI-SELVKGITHGMGVDYCFECTGVPS  234 (335)
Q Consensus       206 ~~~~~-~~~i~~~~~g~g~d~vid~~g~~~  234 (335)
                       ..+. ...+.     .++|+||+++|...
T Consensus       211 -~~~~~~~~~~-----~~~D~Vi~AtG~~~  234 (564)
T PRK12771        211 -GEDITLEQLE-----GEFDAVFVAIGAQL  234 (564)
T ss_pred             -CCcCCHHHHH-----hhCCEEEEeeCCCC
Confidence             0111 11121     26999999999753

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=97.39  E-value=0.002  Score=57.40  Aligned_cols=131  Identities=23%  Similarity=0.331  Sum_probs=78.9

Q ss_pred             ccceEEcCCCCCcccccccccchhhhhHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          113 ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE-AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       113 ~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      ...++++++++.|-.+    ...+|++ +|.-. ..++++.+||=+|+|+ |.++|..++ +|+++|+++|.++-..+.+
T Consensus       129 ~~~~i~lDPGlAFGTG----~HpTT~l-cL~~Le~~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa  201 (300)
T COG2264         129 DELNIELDPGLAFGTG----THPTTSL-CLEALEKLLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAA  201 (300)
T ss_pred             CceEEEEccccccCCC----CChhHHH-HHHHHHHhhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHH
Confidence            3667888887755322    2334443 34322 2367999999999864 777776666 7887999999988655544


Q ss_pred             ----HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh---HHHHHHHHhhccCCeEEEEEccCCC
Q 019822          192 ----KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       192 ----~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                          +..+.....  +.   ..+  ...+...++.+|+|+-.+=..   ...+.+...++++ |++++.|....
T Consensus       202 ~eNa~~N~v~~~~--~~---~~~--~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~~  267 (300)
T COG2264         202 RENARLNGVELLV--QA---KGF--LLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILED  267 (300)
T ss_pred             HHHHHHcCCchhh--hc---ccc--cchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehHh
Confidence                333333100  00   000  011112234899999655222   2456777889997 99999997653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.30  E-value=0.006  Score=52.85  Aligned_cols=104  Identities=18%  Similarity=0.251  Sum_probs=66.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCceEe--CCCCCCchhHHHHHHhhhC-CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---GMTDFI--NPDDEPNKSISELVKGITH-GM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---ga~~v~--~~~~~~~~~~~~~i~~~~~-g~  221 (335)
                      ++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++   +..+.+  |-.+  .....+.+++... -.
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS--TESARNVIEKAAKVLN   80 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence            4679999987 9999999999999999 999999998877655 222   222222  2222  1223333332211 12


Q ss_pred             CccEEEEcCCChH-----------------------HHHHHHHhhccCCeEEEEEccCC
Q 019822          222 GVDYCFECTGVPS-----------------------LLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       222 g~d~vid~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      ++|.++.+.+...                       .++..++.+..+ |+++.++...
T Consensus        81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~  138 (238)
T PRK05786         81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS  138 (238)
T ss_pred             CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence            6899998876320                       134445566666 8898887654

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.25  E-value=0.0049  Score=52.15  Aligned_cols=102  Identities=23%  Similarity=0.405  Sum_probs=69.5

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcC-CceEeCCCCCCchhHHHHHHhh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFG-MTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lg-a~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ....+.++++||.+|+|+ |..++.+++..+. .+|++++.+++..+.++    +++ .+.+....    .+..+.+...
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI  108 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence            456788999999999987 9999999987653 38999999998877653    455 33221111    1222223222


Q ss_pred             hCCCCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEE
Q 019822          218 THGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       218 ~~g~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~  253 (335)
                       .+ .+|.||...+.   ...++.+.+.|+++ |+++..
T Consensus       109 -~~-~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        109 -NE-KFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             -CC-CCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence             22 79999975543   34677888899997 998753

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.25  E-value=0.0023  Score=53.35  Aligned_cols=76  Identities=18%  Similarity=0.245  Sum_probs=56.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC---CceEeCCCCCCchh----HHHHHHhhhCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG---MTDFINPDDEPNKS----ISELVKGITHGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg---a~~v~~~~~~~~~~----~~~~i~~~~~g~  221 (335)
                      .|.+|||+|+ +++|+++++-...+|- +|+.+.|++++++.+++.-   ...|.|-.+   .+    +.+++++-..  
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P--   77 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYP--   77 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCC--
Confidence            3678999965 9999999999999998 9999999999999986643   234555544   44    4444444322  


Q ss_pred             CccEEEEcCC
Q 019822          222 GVDYCFECTG  231 (335)
Q Consensus       222 g~d~vid~~g  231 (335)
                      ..++++++.|
T Consensus        78 ~lNvliNNAG   87 (245)
T COG3967          78 NLNVLINNAG   87 (245)
T ss_pred             chheeeeccc
Confidence            4789998876

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.23  E-value=0.0025  Score=56.03  Aligned_cols=80  Identities=16%  Similarity=0.194  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcC----C-ceE--eCCCCCCchhHHHHHHhhh-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG----M-TDF--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg----a-~~v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      ..+.++||+|+ +++|...+..+...|+ +++.+.|++++++.+. ++.    . ..+  +|-.+   .+-...+.+.. 
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~---~~~~~~l~~~l~   79 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD---PEALERLEDELK   79 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC---hhHHHHHHHHHH
Confidence            46789999998 9999999999999999 9999999999998763 332    1 123  34443   33344444322 


Q ss_pred             -CCCCccEEEEcCCC
Q 019822          219 -HGMGVDYCFECTGV  232 (335)
Q Consensus       219 -~g~g~d~vid~~g~  232 (335)
                       .+..+|+.+++.|.
T Consensus        80 ~~~~~IdvLVNNAG~   94 (265)
T COG0300          80 ERGGPIDVLVNNAGF   94 (265)
T ss_pred             hcCCcccEEEECCCc
Confidence             22479999999985

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.19  E-value=0.0032  Score=58.90  Aligned_cols=113  Identities=13%  Similarity=0.138  Sum_probs=76.4

Q ss_pred             cccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhH
Q 019822          131 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI  210 (335)
Q Consensus       131 l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~  210 (335)
                      +..+-...+..+.+..++.++++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-+....   .++
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~  222 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDY  222 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cch
Confidence            333444445556677788999999999986 47788889988898 9999999999999887643211111111   122


Q ss_pred             HHHHHhhhCCCCccEEEEc-----CCC---hHHHHHHHHhhccCCeEEEEEcc
Q 019822          211 SELVKGITHGMGVDYCFEC-----TGV---PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       211 ~~~i~~~~~g~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                          +++ .+ .+|.|+..     ++.   ...++.+.+.|+++ |+++....
T Consensus       223 ----~~l-~~-~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i  268 (383)
T PRK11705        223 ----RDL-NG-QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI  268 (383)
T ss_pred             ----hhc-CC-CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence                122 23 69998753     332   34678888999998 99887643

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.17  E-value=0.017  Score=51.88  Aligned_cols=140  Identities=11%  Similarity=0.114  Sum_probs=88.6

Q ss_pred             cceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcC---CCCCCEEEEEcC-CHHHHHHHHHHH-HcCCCEE
Q 019822          104 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK---VEKGSSVAVLGL-GTVGLGAVDGAR-MHGAAKI  178 (335)
Q Consensus       104 ~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~~~~VlI~G~-g~vG~~ai~la~-~~G~~~V  178 (335)
                      .|-+|.++..+..+.-  ......+..-+ .+.|+|. |.+...   .-..+.|+|.++ +-.++.++.+++ ..+.-++
T Consensus        90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~  165 (314)
T PF11017_consen   90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV  165 (314)
T ss_pred             hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence            4677777765544311  11111222223 5566664 333222   344567777776 888888888888 4554489


Q ss_pred             EEEcCChhhHHHHHhcCC-ceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          179 IGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       179 ~~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      +++. |+.+..+.+.+|. +.|+.|++         |..+... .--+++|..|+..+...+-+.+...--..+.+|...
T Consensus       166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~-~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th  234 (314)
T PF11017_consen  166 VGLT-SARNVAFVESLGCYDEVLTYDD---------IDSLDAP-QPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH  234 (314)
T ss_pred             EEEe-cCcchhhhhccCCceEEeehhh---------hhhccCC-CCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence            9998 6777789999995 77888875         3333222 456778999998887788887776423466777554


Q ss_pred             C
Q 019822          258 D  258 (335)
Q Consensus       258 ~  258 (335)
                      -
T Consensus       235 ~  235 (314)
T PF11017_consen  235 W  235 (314)
T ss_pred             c
Confidence            3

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.11  E-value=0.0072  Score=49.87  Aligned_cols=102  Identities=22%  Similarity=0.319  Sum_probs=71.0

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce--EeCCCCCCchhHHHHHHhh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD--FINPDDEPNKSISELVKGI  217 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~--v~~~~~~~~~~~~~~i~~~  217 (335)
                      ...++++++.++=+|+|+ |...+++++..-..+|++++++++..+..    ++||.+.  ++..+.      .+.+..+
T Consensus        28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A------p~~L~~~  100 (187)
T COG2242          28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA------PEALPDL  100 (187)
T ss_pred             HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc------hHhhcCC
Confidence            446788999888889864 77888888544444999999999887765    5688663  443332      2223322


Q ss_pred             hCCCCccEEEEcCCC--hHHHHHHHHhhccCCeEEEEEccC
Q 019822          218 THGMGVDYCFECTGV--PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       218 ~~g~g~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                         ..+|.+|=-=|.  +..++.+|..|+++ |++|.-...
T Consensus       101 ---~~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait  137 (187)
T COG2242         101 ---PSPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT  137 (187)
T ss_pred             ---CCCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence               158999843322  35788999999998 999877554

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=97.11  E-value=0.0046  Score=55.52  Aligned_cols=127  Identities=22%  Similarity=0.300  Sum_probs=72.2

Q ss_pred             cccceEEcCCCCCcccccccccchhhhhHHHHHhc-CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019822          112 DANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK  190 (335)
Q Consensus       112 ~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~  190 (335)
                      +.+.++.+++++.|-.+.    ..+|. .+|.... -..++++||=+|+|+ |.+++..++ +|+++|++++.++...+.
T Consensus       127 ~~~~~I~idPg~AFGTG~----H~TT~-lcl~~l~~~~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~  199 (295)
T PF06325_consen  127 PDEIVIEIDPGMAFGTGH----HPTTR-LCLELLEKYVKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEA  199 (295)
T ss_dssp             TTSEEEEESTTSSS-SSH----CHHHH-HHHHHHHHHSSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHH
T ss_pred             CCcEEEEECCCCcccCCC----CHHHH-HHHHHHHHhccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHH
Confidence            335566666665433321    22222 2232222 267889999999763 666666555 688899999999876655


Q ss_pred             HHh----cCC-ceE-eCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHH---HHHHHHhhccCCeEEEEEccCCC
Q 019822          191 GKA----FGM-TDF-INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSL---LSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       191 ~~~----lga-~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~---~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      +++    .|. ..+ +....    +       ... ..||+|+-..-...+   ...+.+.++++ |++++.|....
T Consensus       200 a~~N~~~N~~~~~~~v~~~~----~-------~~~-~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~~  263 (295)
T PF06325_consen  200 ARENAELNGVEDRIEVSLSE----D-------LVE-GKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGILEE  263 (295)
T ss_dssp             HHHHHHHTT-TTCEEESCTS----C-------TCC-S-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEGG
T ss_pred             HHHHHHHcCCCeeEEEEEec----c-------ccc-ccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccHH
Confidence            533    332 122 11111    1       112 389999977655422   34455678887 99999988764

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.08  E-value=0.0083  Score=49.75  Aligned_cols=94  Identities=20%  Similarity=0.258  Sum_probs=64.4

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          154 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       154 VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      |+|+|+ |.+|..+++.+...|. +|+++.|++++.+.  ..+...+ .|..+   .   +.+++...  ++|.||++.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~d---~---~~~~~al~--~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLFD---P---DSVKAALK--GADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTTC---H---HHHHHHHT--TSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeehh---h---hhhhhhhh--hcchhhhhhh
Confidence            789997 9999999999999998 99999999998877  3444332 23332   2   23444333  6999999998


Q ss_pred             C----hHHHHHHHHhhccC-CeEEEEEccCCC
Q 019822          232 V----PSLLSEALETTKVG-KGKVIVIGVGVD  258 (335)
Q Consensus       232 ~----~~~~~~~~~~l~~~-~G~~v~~g~~~~  258 (335)
                      .    ......+++.+... -.+++.++....
T Consensus        70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~~~  101 (183)
T PF13460_consen   70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSSAGV  101 (183)
T ss_dssp             STTTHHHHHHHHHHHHHHTTSSEEEEEEETTG
T ss_pred             hhcccccccccccccccccccccceeeecccc
Confidence            4    22445666665443 137777765543

...

>PRK04148 hypothetical protein; Provisional

Probab=97.05  E-value=0.0057  Score=47.94  Aligned_cols=89  Identities=21%  Similarity=0.247  Sum_probs=60.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      ....++.+++++|.| .|...+..+...|. +|+++|.+++..+.+++.+...+.+.--  .+++  .+.     +++|+
T Consensus        12 ~~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~y-----~~a~l   80 (134)
T PRK04148         12 YEKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EIY-----KNAKL   80 (134)
T ss_pred             cccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HHH-----hcCCE
Confidence            334456789999998 78766666667899 9999999999999998887654432111  0111  111     27899


Q ss_pred             EEEcCCChHHHHHHHHhhcc
Q 019822          226 CFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       226 vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++..-..++..+.+++....
T Consensus        81 iysirpp~el~~~~~~la~~  100 (134)
T PRK04148         81 IYSIRPPRDLQPFILELAKK  100 (134)
T ss_pred             EEEeCCCHHHHHHHHHHHHH
Confidence            99888777555555554444

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.04  E-value=0.0091  Score=54.38  Aligned_cols=102  Identities=24%  Similarity=0.223  Sum_probs=71.3

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhh
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      .+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++    +.|.+.+....    .+..+.+.  
T Consensus        73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~--  145 (322)
T PRK13943         73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVP--  145 (322)
T ss_pred             HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhccc--
Confidence            355678899999999998 49999999998764 36999999998766553    45654332222    22222221  


Q ss_pred             hCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          218 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                       ....+|+|+.+.+.........+.|+++ |+++..
T Consensus       146 -~~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        146 -EFAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             -ccCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence             1236999999888665666788899997 987764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.02  E-value=0.0086  Score=55.57  Aligned_cols=97  Identities=13%  Similarity=0.093  Sum_probs=67.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC---C-ceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG---M-TDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg---a-~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      .+|||+|+|.||+.+++.+.+.+-.+|++.+++.++.+.+.+..   . ...+|-.+   .   +.+.++..  ++|+||
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d---~---~al~~li~--~~d~VI   73 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD---V---DALVALIK--DFDLVI   73 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC---h---HHHHHHHh--cCCEEE
Confidence            47999999999999999988888449999999999988886653   2 23455554   2   23333333  469999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      ++.+........-.++..+ =.+++.....
T Consensus        74 n~~p~~~~~~i~ka~i~~g-v~yvDts~~~  102 (389)
T COG1748          74 NAAPPFVDLTILKACIKTG-VDYVDTSYYE  102 (389)
T ss_pred             EeCCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence            9998875544444556664 4566665544

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.0076  Score=53.75  Aligned_cols=78  Identities=18%  Similarity=0.267  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhh---hCCCCcc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGI---THGMGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~---~~g~g~d  224 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+.+.+...+ .|..+  ..+....+.+.   .++ .+|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g-~id   78 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGG-RLD   78 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCC-Ccc
Confidence            4578999987 9999999999988999 99999999988887766665432 34433  12233333332   233 799


Q ss_pred             EEEEcCC
Q 019822          225 YCFECTG  231 (335)
Q Consensus       225 ~vid~~g  231 (335)
                      ++|++.|
T Consensus        79 ~li~~Ag   85 (277)
T PRK05993         79 ALFNNGA   85 (277)
T ss_pred             EEEECCC
Confidence            9999876

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.95  E-value=0.0064  Score=57.41  Aligned_cols=76  Identities=14%  Similarity=0.092  Sum_probs=55.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .-.+.+|||+|+|.+|.+++..+...|+.+++++.|+.++.+.+ ++++...++...         .+.+...  .+|+|
T Consensus       178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---------~l~~~l~--~aDiV  246 (414)
T PRK13940        178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---------ELPQLIK--KADII  246 (414)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---------HHHHHhc--cCCEE
Confidence            34678999999999999999999999987999999998876554 556522222221         2222222  58999


Q ss_pred             EEcCCChH
Q 019822          227 FECTGVPS  234 (335)
Q Consensus       227 id~~g~~~  234 (335)
                      |+|++.+.
T Consensus       247 I~aT~a~~  254 (414)
T PRK13940        247 IAAVNVLE  254 (414)
T ss_pred             EECcCCCC
Confidence            99999874

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.94  E-value=0.014  Score=48.89  Aligned_cols=100  Identities=20%  Similarity=0.217  Sum_probs=62.9

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCc
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      ..+.++++||.+|+|+-+. +..+++.. +..+|++++.++..    +..+...+ .+..+   ....+.+++.....++
T Consensus        28 ~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~~   99 (188)
T TIGR00438        28 KLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDKV   99 (188)
T ss_pred             cccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCCc
Confidence            4568999999999876444 44444443 44489999998754    11233222 13332   3344455555555589


Q ss_pred             cEEEE-cC----CC------------hHHHHHHHHhhccCCeEEEEEc
Q 019822          224 DYCFE-CT----GV------------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       224 d~vid-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      |+|+. ..    |.            ...+..+.+.|+++ |+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence            99994 32    21            24677889999997 9998764

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0067  Score=52.23  Aligned_cols=77  Identities=19%  Similarity=0.342  Sum_probs=52.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE--eCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF--INPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v--~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ++++|+|+ |.+|...+..+...|+ +|+++++++++.+.+++++....  .|-.+  .....+.++++.. .++|++|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~-~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQG-QRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhc-CCCCEEEE
Confidence            46899987 9999999998888999 99999998877766655542222  23332  1223333343433 37999998


Q ss_pred             cCCC
Q 019822          229 CTGV  232 (335)
Q Consensus       229 ~~g~  232 (335)
                      +.|.
T Consensus        78 ~ag~   81 (225)
T PRK08177         78 NAGI   81 (225)
T ss_pred             cCcc
Confidence            7753

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.91  E-value=0.00093  Score=50.69  Aligned_cols=93  Identities=24%  Similarity=0.307  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHHHhc----CC-ceE-eCCCCCCchhHHHHHHhhhCCCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKGKAF----GM-TDF-INPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~-~~G~~~V~~~~~~~~~~~~~~~l----ga-~~v-~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      |+.+||-+|+|. |..++.+++ ..++ +|++++.+++..+.+++.    +. +.+ +-..     ++ .  .......+
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-----d~-~--~~~~~~~~   70 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG-----DA-E--FDPDFLEP   70 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-----CC-H--GGTTTSSC
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-----cc-c--cCcccCCC
Confidence            678999999875 888888888 4677 999999999988887442    21 222 1111     22 1  11222337


Q ss_pred             ccEEEEcC-CC---h------HHHHHHHHhhccCCeEEEEE
Q 019822          223 VDYCFECT-GV---P------SLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       223 ~d~vid~~-g~---~------~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ||+|+... ..   .      ..++.+.+.|+++ |+++.-
T Consensus        71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~  110 (112)
T PF12847_consen   71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN  110 (112)
T ss_dssp             EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            99999766 21   1      1378889999997 988753

...

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.90  E-value=0.011  Score=47.86  Aligned_cols=101  Identities=24%  Similarity=0.337  Sum_probs=64.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      .-.+++++|+|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|.. +.        ...    +...  ..|++|
T Consensus        20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~----~a~~--~adi~v   83 (162)
T PF00670_consen   20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLE----EALR--DADIFV   83 (162)
T ss_dssp             --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HH----HHTT--T-SEEE
T ss_pred             eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHH----HHHh--hCCEEE
Confidence            4678999999999999999999999999 999999998777666555653 21        122    2221  579999


Q ss_pred             EcCCChHHH-HHHHHhhccCCeEEEEEccCCCccccchhHHH
Q 019822          228 ECTGVPSLL-SEALETTKVGKGKVIVIGVGVDAMVPLNVIAL  268 (335)
Q Consensus       228 d~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~  268 (335)
                      .++|....+ .+-++.++++ ..+.-+|..   +.+++...+
T Consensus        84 taTG~~~vi~~e~~~~mkdg-ail~n~Gh~---d~Eid~~~L  121 (162)
T PF00670_consen   84 TATGNKDVITGEHFRQMKDG-AILANAGHF---DVEIDVDAL  121 (162)
T ss_dssp             E-SSSSSSB-HHHHHHS-TT-EEEEESSSS---TTSBTHHHH
T ss_pred             ECCCCccccCHHHHHHhcCC-eEEeccCcC---ceeEeeccc
Confidence            999987543 4778889886 455444443   345555444

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK12742 oxidoreductase; Provisional

Probab=96.88  E-value=0.029  Score=48.49  Aligned_cols=77  Identities=22%  Similarity=0.274  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH-HhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      +++++||+|+ |.+|.++++.+...|+ +|+.+.+ ++++.+.+ ++++...+ .|..+  ...+.+.+.+.  + ++|+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~--~-~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRKS--G-ALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHHh--C-CCcE
Confidence            4689999987 9999999999999999 8877654 44444443 44554332 23322  12233333321  2 6899


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      +|++.|.
T Consensus        79 li~~ag~   85 (237)
T PRK12742         79 LVVNAGI   85 (237)
T ss_pred             EEECCCC
Confidence            9998864

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.01  Score=52.78  Aligned_cols=78  Identities=18%  Similarity=0.290  Sum_probs=54.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhh-CCCCccEEEE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGIT-HGMGVDYCFE  228 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~-~g~g~d~vid  228 (335)
                      +++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+.+...+ .|..+  ...+.+.+.+.. ...++|++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence            47899987 9999999999998999 99999998888777666554433 34433  123333333332 1126999999


Q ss_pred             cCCC
Q 019822          229 CTGV  232 (335)
Q Consensus       229 ~~g~  232 (335)
                      +.|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            8873

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.85  E-value=0.023  Score=48.66  Aligned_cols=101  Identities=24%  Similarity=0.360  Sum_probs=69.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i  214 (335)
                      +.....+.++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.+++    .|...  ++..+.      .   
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~------~---  137 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG------T---  137 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc------c---
Confidence            44667789999999999874 7888888887763 399999999887766643    44322  222221      0   


Q ss_pred             HhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          215 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ..+.....||+|+-+...+.....+.+.|+++ |+++..
T Consensus       138 ~~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~  175 (212)
T PRK13942        138 LGYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP  175 (212)
T ss_pred             cCCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence            01112237999986554454667888999998 998775

>PRK00536 speE spermidine synthase; Provisional

Probab=96.83  E-value=0.0046  Score=54.47  Aligned_cols=99  Identities=8%  Similarity=-0.085  Sum_probs=67.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CC-ceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GM-TDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga-~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      ...++|||+|+|. |.++-.++|+- . +|..++.+++-.+.++++ .. ...++...   ......+++... ..+|+|
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~-~~fDVI  143 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDI-KKYDLI  143 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccC-CcCCEE
Confidence            4568999998765 66777888875 3 999999999988888873 21 11121111   112122333222 379999


Q ss_pred             E-EcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          227 F-ECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       227 i-d~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      | |++-.++..+.+.++|+++ |.++.-+.
T Consensus       144 IvDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~  172 (262)
T PRK00536        144 ICLQEPDIHKIDGLKRMLKED-GVFISVAK  172 (262)
T ss_pred             EEcCCCChHHHHHHHHhcCCC-cEEEECCC
Confidence            7 8676676788999999998 98887644

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.81  E-value=0.014  Score=52.29  Aligned_cols=43  Identities=19%  Similarity=0.224  Sum_probs=38.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      ..+++|+|+|+|++|.+++..+...|+++|+++++++++.+.+
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l  167 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL  167 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            3567999999999999999999999998999999998887665

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.81  E-value=0.0035  Score=53.45  Aligned_cols=101  Identities=21%  Similarity=0.398  Sum_probs=67.2

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHH----HhcCCceE--eCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKG----KAFGMTDF--INPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~-~V~~~~~~~~~~~~~----~~lga~~v--~~~~~~~~~~~~~~i  214 (335)
                      +.+...++++++||-+|+|+ |+.++-+++..|.. .|+.++..++-.+.+    ++++...|  +..+.         .
T Consensus        64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg---------~  133 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG---------S  133 (209)
T ss_dssp             HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G---------G
T ss_pred             HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch---------h
Confidence            45778899999999999874 88999999988753 699999888654444    45565432  22221         1


Q ss_pred             HhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          215 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .-+.....||.|+-+.+.+..-...++.|+++ |++|..
T Consensus       134 ~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p  171 (209)
T PF01135_consen  134 EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP  171 (209)
T ss_dssp             GTTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred             hccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence            11222337999998777665667899999998 999874

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.80  E-value=0.016  Score=47.54  Aligned_cols=97  Identities=21%  Similarity=0.232  Sum_probs=63.3

Q ss_pred             cccccchhhhhHHHHHhcCCCCCCEEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCc
Q 019822          129 SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  207 (335)
Q Consensus       129 a~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~-vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~  207 (335)
                      ...+|....+...+.+...--.+++|||+|+|. +|..++.+++..|+ +|+++.++.+                     
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------   79 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------   79 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence            334544334433333333456889999999986 59999999999999 8888886521                     


Q ss_pred             hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                       +..+.++      .+|+||.+++.+..+..  +.+.++ -.+++++.+.
T Consensus        80 -~l~~~l~------~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr  119 (168)
T cd01080          80 -NLKEHTK------QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR  119 (168)
T ss_pred             -hHHHHHh------hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence             1222222      58999999998754333  346665 6777887654

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK14967 putative methyltransferase; Provisional

Probab=96.79  E-value=0.068  Score=46.08  Aligned_cols=98  Identities=19%  Similarity=0.201  Sum_probs=63.5

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eEeCCCCCCchhHHHHHHhhh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ....+.++++||-+|+|. |..++.+++. +..+|++++.+++..+.+++    .+.. .++..      ++...+    
T Consensus        30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~------d~~~~~----   97 (223)
T PRK14967         30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG------DWARAV----   97 (223)
T ss_pred             HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC------chhhhc----
Confidence            345677889999999986 8888888875 55599999999987776543    3432 22222      222211    


Q ss_pred             CCCCccEEEEcCCC---------------------------hHHHHHHHHhhccCCeEEEEEc
Q 019822          219 HGMGVDYCFECTGV---------------------------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       219 ~g~g~d~vid~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ....+|+|+...+.                           ...+..+.+.|+++ |+++.+.
T Consensus        98 ~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~  159 (223)
T PRK14967         98 EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ  159 (223)
T ss_pred             cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            22379999864210                           11345677888897 9988653

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.0068  Score=55.67  Aligned_cols=79  Identities=18%  Similarity=0.313  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      +++++||+|+ |++|.++++.+...|+ +|+.+++++++++.+    ++.|... +  .|-.+  .....+.+.+..  .
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   82 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG   82 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence            5689999987 9999999999999999 999999998877643    3445432 2  23332  122222222211  2


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|++.|.
T Consensus        83 g-~iD~lVnnAG~   94 (330)
T PRK06139         83 G-RIDVWVNNVGV   94 (330)
T ss_pred             C-CCCEEEECCCc
Confidence            3 69999998873

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.75  E-value=0.014  Score=49.61  Aligned_cols=101  Identities=14%  Similarity=0.137  Sum_probs=67.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCc---eEeCCCCCCchhHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMT---DFINPDDEPNKSISEL  213 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lga~---~v~~~~~~~~~~~~~~  213 (335)
                      +.+...+.++++||-+|+|. |..++.+++..+ ..+|++++.+++-.+.++    +.+..   .++..+.      .+.
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~  136 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRG  136 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccC
Confidence            34566788899999999874 888888888765 238999999988666553    34432   2222221      111


Q ss_pred             HHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          214 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       214 i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                         +.....||.|+-+.......+.+.+.|+++ |+++..
T Consensus       137 ---~~~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        137 ---LEKHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             ---CccCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence               111237999986655544567888999998 998764

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.74  E-value=0.01  Score=49.85  Aligned_cols=81  Identities=15%  Similarity=0.220  Sum_probs=59.3

Q ss_pred             CCCEEEEEcC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc-eEeCCCCC-CchhHHHHHHhhhCCCCcc
Q 019822          150 KGSSVAVLGL--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT-DFINPDDE-PNKSISELVKGITHGMGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~--g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~-~v~~~~~~-~~~~~~~~i~~~~~g~g~d  224 (335)
                      ..+.|||+|+  |++|.+++.=...-|+ .|+++.|+-+....+. ++|.. .=+|..+. .-..+...+++.++| +.|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G-kld   83 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDG-KLD   83 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCC-ceE
Confidence            4568999974  9999999999999999 9999999999888775 77742 22443330 012245566666777 899


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      +.++..|.
T Consensus        84 ~L~NNAG~   91 (289)
T KOG1209|consen   84 LLYNNAGQ   91 (289)
T ss_pred             EEEcCCCC
Confidence            99987764

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.73  E-value=0.011  Score=49.12  Aligned_cols=91  Identities=24%  Similarity=0.438  Sum_probs=60.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      .-.+++|.|+|.|.+|..++++++.+|+ +|++.+++....+.....+...         .++.+.++      ..|+|+
T Consensus        33 ~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~---------~~l~ell~------~aDiv~   96 (178)
T PF02826_consen   33 ELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY---------VSLDELLA------QADIVS   96 (178)
T ss_dssp             -STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE---------SSHHHHHH------H-SEEE
T ss_pred             ccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee---------eehhhhcc------hhhhhh
Confidence            3468999999999999999999999999 9999999887766455555321         12333332      478888


Q ss_pred             EcCCChH----HH-HHHHHhhccCCeEEEEEcc
Q 019822          228 ECTGVPS----LL-SEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       228 d~~g~~~----~~-~~~~~~l~~~~G~~v~~g~  255 (335)
                      .+....+    .+ ...++.++++ ..+|-++.
T Consensus        97 ~~~plt~~T~~li~~~~l~~mk~g-a~lvN~aR  128 (178)
T PF02826_consen   97 LHLPLTPETRGLINAEFLAKMKPG-AVLVNVAR  128 (178)
T ss_dssp             E-SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred             hhhccccccceeeeeeeeeccccc-eEEEeccc
Confidence            7665321    12 3567777775 66665554

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08017 oxidoreductase; Provisional

Probab=96.72  E-value=0.0083  Score=52.57  Aligned_cols=76  Identities=22%  Similarity=0.362  Sum_probs=53.7

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHH---HHHHhhhCCCCccEE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSIS---ELVKGITHGMGVDYC  226 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~---~~i~~~~~g~g~d~v  226 (335)
                      +++||+|+ |.+|.++++.+...|+ +|++++++.++.+.+++.++..+ .|..+  .....   +.+.+...+ .+|.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~-~~~~i   78 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDN-RLYGL   78 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCC-CCeEE
Confidence            57999997 9999999999999999 99999999988888777775443 33332  12222   222222223 68888


Q ss_pred             EEcCC
Q 019822          227 FECTG  231 (335)
Q Consensus       227 id~~g  231 (335)
                      +.+.|
T Consensus        79 i~~ag   83 (256)
T PRK08017         79 FNNAG   83 (256)
T ss_pred             EECCC
Confidence            88766

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.68  E-value=0.02  Score=50.87  Aligned_cols=105  Identities=22%  Similarity=0.353  Sum_probs=68.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E----eCCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F----INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v----~~~~~~~~~~~~~~i~~~~-  218 (335)
                      .++.|+|+|+ +++|.+++.-....|+ +++.+.+..++++.+    ++.++.. +    .|-.+  ..+....+.+.. 
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~~   87 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAIR   87 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHHH
Confidence            5788999998 8999998888888999 888888888877665    3444322 2    23222  123333332211 


Q ss_pred             -CCCCccEEEEcCCChH-------------------------HHHHHHHhhccCC-eEEEEEccCCC
Q 019822          219 -HGMGVDYCFECTGVPS-------------------------LLSEALETTKVGK-GKVIVIGVGVD  258 (335)
Q Consensus       219 -~g~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~~-G~~v~~g~~~~  258 (335)
                       -| ++|+.++..|-..                         ....++..+.+.+ |+++.++...+
T Consensus        88 ~fg-~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG  153 (282)
T KOG1205|consen   88 HFG-RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG  153 (282)
T ss_pred             hcC-CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence             23 7999999877311                         2345566666544 89999987776

>PLN02366 spermidine synthase

Probab=96.68  E-value=0.019  Score=51.99  Aligned_cols=101  Identities=17%  Similarity=0.115  Sum_probs=64.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CC------ceEeCCCCCCchhHHHHHHhhhCC
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GM------TDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga------~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      ....++|||+|+|. |.++..++++-+..+|.+++.+++-.+.++++ ..      +.-+.-..   .|....+++.. +
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~---~Da~~~l~~~~-~  163 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI---GDGVEFLKNAP-E  163 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE---ChHHHHHhhcc-C
Confidence            35678999998865 66777888876666899999988877777663 11      00000011   23333444432 3


Q ss_pred             CCccEEE-EcCC---------ChHHHHHHHHhhccCCeEEEEEc
Q 019822          221 MGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       221 ~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ..+|+|| |+..         ..+.++.+.+.|+++ |.++.-+
T Consensus       164 ~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~  206 (308)
T PLN02366        164 GTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA  206 (308)
T ss_pred             CCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence            3799998 5432         123577889999998 9987653

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.68  E-value=0.0076  Score=49.58  Aligned_cols=105  Identities=23%  Similarity=0.277  Sum_probs=67.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeC-CCCCC-------------chhHHHHHH
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN-PDDEP-------------NKSISELVK  215 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~-~~~~~-------------~~~~~~~i~  215 (335)
                      ++.+|+|+|+|.+|..|+.+++.+|+ +|+..+...++.+..+..++..+.. .....             +......+.
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            45789999999999999999999999 9999999999888888877654322 10000             122233333


Q ss_pred             hhhCCCCccEEEEcC---C--ChHH-HHHHHHhhccCCeEEEEEccCCC
Q 019822          216 GITHGMGVDYCFECT---G--VPSL-LSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       216 ~~~~g~g~d~vid~~---g--~~~~-~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      +...  .+|++|.+.   +  .+.+ -+..++.+.++ ..+++++.-.+
T Consensus        98 ~~i~--~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~g  143 (168)
T PF01262_consen   98 EFIA--PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQG  143 (168)
T ss_dssp             HHHH--H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT
T ss_pred             HHHh--hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCC
Confidence            3322  478888532   1  1212 24667788886 88888875544

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.68  E-value=0.0078  Score=53.95  Aligned_cols=76  Identities=17%  Similarity=0.065  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-EeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      ++++++|+|+|+.+.+++..+..+|+++|+++.|+.++.+.+ ++++... +....      ..+.+.+..  ..+|+||
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~~--~~~DiVI  195 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAIE--KAAEVLV  195 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhcc--cCCCEEE
Confidence            578999999999999999999999998999999998887665 3443211 11010      001121211  2689999


Q ss_pred             EcCCCh
Q 019822          228 ECTGVP  233 (335)
Q Consensus       228 d~~g~~  233 (335)
                      +|++..
T Consensus       196 naTp~g  201 (282)
T TIGR01809       196 STVPAD  201 (282)
T ss_pred             ECCCCC
Confidence            998753

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.65  E-value=0.041  Score=42.17  Aligned_cols=101  Identities=17%  Similarity=0.318  Sum_probs=67.0

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce--EeCCCCCCchhHHHHHHh
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG  216 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i~~  216 (335)
                      .....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.++    .++...  ++..+.   ..   .+..
T Consensus        12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~---~~~~   84 (124)
T TIGR02469        12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PE---ALED   84 (124)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---cc---cChh
Confidence            3455667788999999876 888999998875449999999998777764    344322  222221   10   0111


Q ss_pred             hhCCCCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEE
Q 019822          217 ITHGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      . . ..+|+|+...+.   ...++.+.+.|+++ |+++..
T Consensus        85 ~-~-~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~  121 (124)
T TIGR02469        85 S-L-PEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN  121 (124)
T ss_pred             h-c-CCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence            1 1 279999965432   23678899999997 998764

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK06182 short chain dehydrogenase; Validated

Probab=96.64  E-value=0.014  Score=51.88  Aligned_cols=80  Identities=19%  Similarity=0.246  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhh-CCCCccEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGIT-HGMGVDYC  226 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~-~g~g~d~v  226 (335)
                      ++++++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+.+...+ .|-.+  ..++.+.+++.. ...++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence            3578999987 9999999999988999 99999999888776655554332 34333  233333344321 11279999


Q ss_pred             EEcCCC
Q 019822          227 FECTGV  232 (335)
Q Consensus       227 id~~g~  232 (335)
                      |++.|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            998873

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.041  Score=47.52  Aligned_cols=80  Identities=18%  Similarity=0.217  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC---CceEe--CCCCCCchhHHHHHHhhhC-CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG---MTDFI--NPDDEPNKSISELVKGITH-GM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg---a~~v~--~~~~~~~~~~~~~i~~~~~-g~  221 (335)
                      ++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++.   .-+.+  |-.+  ...+.+.+++... ..
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD--EADVQRAVDAIVAAFG   81 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC--HHHHHHHHHHHHHHcC
Confidence            4688999987 9999999998888899 899999988766544 3332   11222  3222  2333333433221 12


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|++.+.
T Consensus        82 ~~d~vi~~ag~   92 (237)
T PRK07326         82 GLDVLIANAGV   92 (237)
T ss_pred             CCCEEEECCCC
Confidence            68999988763

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.63  E-value=0.0023  Score=56.91  Aligned_cols=99  Identities=18%  Similarity=0.284  Sum_probs=62.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc---eEeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT---DFINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~---~v~~~~~~~~~~~~~~i  214 (335)
                      +.+++++++|++||-+|+| -|..++.+++..|+ +|++++.|++..++++    +.|..   .+...      +    .
T Consensus        54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~------D----~  121 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ------D----Y  121 (273)
T ss_dssp             HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----------G
T ss_pred             HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe------e----c
Confidence            4577899999999999987 47788889998899 9999999999988874    34521   12111      1    1


Q ss_pred             HhhhCCCCccEEEE-----cCCC---hHHHHHHHHhhccCCeEEEEEcc
Q 019822          215 KGITHGMGVDYCFE-----CTGV---PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       215 ~~~~~g~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      +++..  .||.|+.     .+|.   +..++.+.+.|+|+ |+++.-..
T Consensus       122 ~~~~~--~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i  167 (273)
T PF02353_consen  122 RDLPG--KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI  167 (273)
T ss_dssp             GG-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred             cccCC--CCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence            22222  7898875     3442   34678899999998 99875543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.016  Score=50.27  Aligned_cols=77  Identities=18%  Similarity=0.296  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      ++++++|+|+ |.+|..+++.+...|+ +|+.++++.++.+.+ ++.+...+ .|..+   ......+.+.  ..++|++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~--~~~~d~v   81 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA--AGAFDGL   81 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH--hCCCCEE
Confidence            5678999987 9999999999999999 999999988777655 33444322 34333   2222222221  2268999


Q ss_pred             EEcCCC
Q 019822          227 FECTGV  232 (335)
Q Consensus       227 id~~g~  232 (335)
                      |++.|.
T Consensus        82 i~~ag~   87 (245)
T PRK07060         82 VNCAGI   87 (245)
T ss_pred             EECCCC
Confidence            998874

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.61  E-value=0.036  Score=54.10  Aligned_cols=47  Identities=21%  Similarity=0.174  Sum_probs=39.7

Q ss_pred             HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          144 KEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      +..+.+.+++|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l  120 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL  120 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence            3455678899999987 9999999999988999 999999998876543

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.041  Score=47.86  Aligned_cols=80  Identities=19%  Similarity=0.167  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eEe--CCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DFI--NPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      +++++||+|+ |.+|..++..+...|+ +|+++++++++.+.+    ++.+.. .++  |-.+  ..+..+.+.+... -
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   82 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4688999987 9999999999998999 899999888765543    223322 122  3332  1222222222111 1


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|++|.+.|.
T Consensus        83 ~~id~vi~~ag~   94 (250)
T PRK12939         83 GGLDGLVNNAGI   94 (250)
T ss_pred             CCCCEEEECCCC
Confidence            279999998874

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.55  E-value=0.018  Score=55.77  Aligned_cols=73  Identities=18%  Similarity=0.259  Sum_probs=55.0

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      +.++++|+|+|.|.+|++++++++..|+ +|++++..+++.+.++++|+.. +....     ..+.+      +.+|+|+
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l------~~~D~VV   75 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQI------ADYALVV   75 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHh------hcCCEEE
Confidence            5578899999999999999999999999 9999998777766677778743 32221     11122      2579999


Q ss_pred             EcCCCh
Q 019822          228 ECTGVP  233 (335)
Q Consensus       228 d~~g~~  233 (335)
                      .+.|-+
T Consensus        76 ~SpGi~   81 (488)
T PRK03369         76 TSPGFR   81 (488)
T ss_pred             ECCCCC
Confidence            988764

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.02  Score=50.82  Aligned_cols=78  Identities=21%  Similarity=0.307  Sum_probs=52.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-Cce-EeCCCCCCchhHHHHHHhhh--CCCCcc
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG-MTD-FINPDDEPNKSISELVKGIT--HGMGVD  224 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg-a~~-v~~~~~~~~~~~~~~i~~~~--~g~g~d  224 (335)
                      +.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++ ... ..|-.+  +.++.+.+.+..  .+ ++|
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~-~id   80 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLG-PID   80 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcC-CCC
Confidence            578999987 9999999998888899 899999988877654 4444 221 224333  233333333322  13 689


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      ++|++.|.
T Consensus        81 ~li~~ag~   88 (273)
T PRK07825         81 VLVNNAGV   88 (273)
T ss_pred             EEEECCCc
Confidence            99998873

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.51  E-value=0.016  Score=51.36  Aligned_cols=104  Identities=14%  Similarity=0.214  Sum_probs=75.8

Q ss_pred             hhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eE--eCCCCCCch
Q 019822          138 GYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DF--INPDDEPNK  208 (335)
Q Consensus       138 a~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v--~~~~~~~~~  208 (335)
                      +...+.+..+++||.+||=+|+|- |.+++.+|+..|. +|++++-|++..+++++    .|..   .+  -|+++    
T Consensus        60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd----  133 (283)
T COG2230          60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD----  133 (283)
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc----
Confidence            334456889999999999999875 7888999999999 99999999999888754    4432   12  12222    


Q ss_pred             hHHHHHHhhhCCCCccEEEE-----cCCC---hHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          209 SISELVKGITHGMGVDYCFE-----CTGV---PSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       209 ~~~~~i~~~~~g~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                              +. + .||-|+.     -+|.   +..+..+.+.|+++ |++.+......
T Consensus       134 --------~~-e-~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~  180 (283)
T COG2230         134 --------FE-E-PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGP  180 (283)
T ss_pred             --------cc-c-ccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCC
Confidence                    21 2 3777764     4443   34678889999998 99988876554

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.50  E-value=0.024  Score=50.43  Aligned_cols=70  Identities=17%  Similarity=0.135  Sum_probs=50.8

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      .+...+++++|+|+|+.+++++..++..|+++|+++.|++++.+.+. .++..            +...+.    ...+|
T Consensus       117 ~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~------------~~~~~~----~~~~d  180 (272)
T PRK12550        117 YQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE------------WRPDLG----GIEAD  180 (272)
T ss_pred             cCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc------------chhhcc----cccCC
Confidence            34455678999999999999999999999978999999998877653 34311            100111    12589


Q ss_pred             EEEEcCC
Q 019822          225 YCFECTG  231 (335)
Q Consensus       225 ~vid~~g  231 (335)
                      +||+|++
T Consensus       181 lvINaTp  187 (272)
T PRK12550        181 ILVNVTP  187 (272)
T ss_pred             EEEECCc
Confidence            9999986

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.47  E-value=0.054  Score=45.38  Aligned_cols=98  Identities=16%  Similarity=0.162  Sum_probs=62.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      +.++.+||-+|+|+ |..++.+++.....+|++++.+++..+.++    +.+.+.+ ....   .+..    +......+
T Consensus        43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~----~~~~~~~f  113 (187)
T PRK00107         43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAE----EFGQEEKF  113 (187)
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHh----hCCCCCCc
Confidence            44588999999864 666677776544339999999988776664    3444322 1111   1121    12223379


Q ss_pred             cEEEEc-CCC-hHHHHHHHHhhccCCeEEEEEcc
Q 019822          224 DYCFEC-TGV-PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       224 d~vid~-~g~-~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      |+|+.. ... +..++.+.+.|+++ |+++.+-.
T Consensus       114 DlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  146 (187)
T PRK00107        114 DVVTSRAVASLSDLVELCLPLLKPG-GRFLALKG  146 (187)
T ss_pred             cEEEEccccCHHHHHHHHHHhcCCC-eEEEEEeC
Confidence            999853 322 34677889999998 99988843

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.045  Score=47.65  Aligned_cols=102  Identities=19%  Similarity=0.182  Sum_probs=60.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhhC-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKG----KAFGMT-DF--INPDDEPNKSISELVKGITH-  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-  219 (335)
                      +++++||+|+ |.+|..++..+...|+ +|+++.++.+ +.+.+    +..+.. ..  .|..+  +.+....+++... 
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   81 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE   81 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence            4678999987 9999999999888999 8988887643 33222    222322 11  23332  2233333333221 


Q ss_pred             CCCccEEEEcCCCh-------------------HHHHHHHHhhccCCeEEEEEcc
Q 019822          220 GMGVDYCFECTGVP-------------------SLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       220 g~g~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ..++|+++.+.+..                   ..++.+.+.+... |+++.++.
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence            12689998877532                   1334455555555 78888865

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.45  E-value=0.055  Score=46.82  Aligned_cols=93  Identities=16%  Similarity=0.217  Sum_probs=61.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCC--EEEEEcCC----hhh--------HHHHHhcCCceEeCCCCCCchhHHHHH
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAA--KIIGIDKN----PWK--------KEKGKAFGMTDFINPDDEPNKSISELV  214 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~--~V~~~~~~----~~~--------~~~~~~lga~~v~~~~~~~~~~~~~~i  214 (335)
                      -.+.+++|+|+|+.|.+++..+...|.+  +++.++++    +++        .+++++++... .   .   .++.+.+
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l   95 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL   95 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence            5678999999999999999999999997  89999988    343        23344443211 1   0   1232333


Q ss_pred             HhhhCCCCccEEEEcCCChHHH-HHHHHhhccCCeEEEEEccC
Q 019822          215 KGITHGMGVDYCFECTGVPSLL-SEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +      ++|++|++++.. .+ ...++.+.++ ..+..+..+
T Consensus        96 ~------~~dvlIgaT~~G-~~~~~~l~~m~~~-~ivf~lsnP  130 (226)
T cd05311          96 K------GADVFIGVSRPG-VVKKEMIKKMAKD-PIVFALANP  130 (226)
T ss_pred             h------cCCEEEeCCCCC-CCCHHHHHhhCCC-CEEEEeCCC
Confidence            1      489999999732 33 3666777775 555555533

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.022  Score=49.93  Aligned_cols=80  Identities=19%  Similarity=0.255  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-EeCCCCCCchhHHHHHHhhh-CCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-FINPDDEPNKSISELVKGIT-HGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v~~~~~~~~~~~~~~i~~~~-~g~g~d~  225 (335)
                      ++++|||+|+ |.+|.++++.+...|+ +|+++++++.+.+.. ++++... ..|..+  .......+.+.. ...++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            5789999987 9999999999999999 999999888776554 4444322 223333  122222333221 1126899


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      +|.+.|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9988763

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.44  E-value=0.011  Score=50.65  Aligned_cols=101  Identities=20%  Similarity=0.269  Sum_probs=66.8

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCce--EeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i  214 (335)
                      +.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.++    ++|.+.  ++..+      .... 
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d------~~~~-  140 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD------GTQG-  140 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC------cccC-
Confidence            44567788999999999874 7777888887653 36999999988776653    345332  22111      1111 


Q ss_pred             HhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          215 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                        ......||+|+-..........+.+.|+++ |+++..
T Consensus       141 --~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       141 --WEPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             --CcccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence              111237999885444444567888999997 998765

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.026  Score=49.87  Aligned_cols=80  Identities=18%  Similarity=0.231  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----CCc-eE--eCCCCCCchhHHHHHHhhhCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF----GMT-DF--INPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l----ga~-~v--~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      +++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. ++    +.. ..  .|-.+  +.+..+.+.+...-
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence            4788999987 8999999999999999 9999999887765542 22    321 12  23332  23333333332221


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|+++++.|.
T Consensus        84 g~iD~lv~nag~   95 (263)
T PRK08339         84 GEPDIFFFSTGG   95 (263)
T ss_pred             CCCcEEEECCCC
Confidence            268999998874

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.43  E-value=0.058  Score=44.08  Aligned_cols=90  Identities=19%  Similarity=0.220  Sum_probs=58.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      .+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+... +       +..+.++      ..|+||-|+.
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-~-------s~~e~~~------~~dvvi~~v~   66 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-D-------SPAEAAE------QADVVILCVP   66 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-S-------SHHHHHH------HBSEEEE-SS
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-h-------hhhhHhh------cccceEeecc
Confidence            368889999999999998888999 99999999999998887775322 1       1222222      3589998888


Q ss_pred             ChHHHHHHHH------hhccCCeEEEEEccCC
Q 019822          232 VPSLLSEALE------TTKVGKGKVIVIGVGV  257 (335)
Q Consensus       232 ~~~~~~~~~~------~l~~~~G~~v~~g~~~  257 (335)
                      .....+..+.      .+.++ ..++.++...
T Consensus        67 ~~~~v~~v~~~~~i~~~l~~g-~iiid~sT~~   97 (163)
T PF03446_consen   67 DDDAVEAVLFGENILAGLRPG-KIIIDMSTIS   97 (163)
T ss_dssp             SHHHHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred             cchhhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence            7555554433      34454 5666665544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.048  Score=50.13  Aligned_cols=79  Identities=18%  Similarity=0.183  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+    ++.|...   ..|..+  ..+..+.+.+..  -
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~   83 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence            4678999987 9999999999998999 999999988776543    3345332   134333  122333332221  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|++.|.
T Consensus        84 g-~iD~lInnAg~   95 (334)
T PRK07109         84 G-PIDTWVNNAMV   95 (334)
T ss_pred             C-CCCEEEECCCc
Confidence            3 68999998874

>PRK00811 spermidine synthase; Provisional

Probab=96.43  E-value=0.02  Score=51.39  Aligned_cols=95  Identities=14%  Similarity=0.128  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC------C--c---eEeCCCCCCchhHHHHHHhh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG------M--T---DFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg------a--~---~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ..+++||++|+|. |..+..+++..+..+|.+++.+++-.+.++++-      .  +   .++.      .+....+++ 
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~-  146 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE-  146 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence            4567999999865 777778888767669999999998888876531      1  1   1221      223333433 


Q ss_pred             hCCCCccEEE-EcCCC---------hHHHHHHHHhhccCCeEEEEE
Q 019822          218 THGMGVDYCF-ECTGV---------PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       218 ~~g~g~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      . ...+|+|+ |+...         .+.++.+.+.|+++ |.++.-
T Consensus       147 ~-~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~  190 (283)
T PRK00811        147 T-ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ  190 (283)
T ss_pred             C-CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            2 33799998 43211         23457888999998 998865

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.035  Score=48.94  Aligned_cols=80  Identities=18%  Similarity=0.177  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHHhhhC-CCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVKGITH-GMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g~g~  223 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+.++++.++.+.+ ++++.. ..  .|-.+  ..+..+.+++... -..+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence            4679999987 9999999999999999 999999988765554 444422 12  23332  1233333333211 1268


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|++.|.
T Consensus        82 d~lv~~ag~   90 (261)
T PRK08265         82 DILVNLACT   90 (261)
T ss_pred             CEEEECCCC
Confidence            999998763

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.028  Score=49.37  Aligned_cols=82  Identities=18%  Similarity=0.237  Sum_probs=51.1

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCChhh-HHH----HHhcCC--ceE--eCCCCCCchhHHHHHHh
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWK-KEK----GKAFGM--TDF--INPDDEPNKSISELVKG  216 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~-G~~~V~~~~~~~~~-~~~----~~~lga--~~v--~~~~~~~~~~~~~~i~~  216 (335)
                      +..+++|||+|+ |++|.++++-+... |+ +|+.+++++++ .+.    +++.+.  .++  .|-.+  ..+..+.+++
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~--~~~~~~~~~~   81 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD--TDSHPKVIDA   81 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC--hHHHHHHHHH
Confidence            467789999987 99999999876666 57 99999988765 332    233332  122  23322  1333333444


Q ss_pred             hhCCCCccEEEEcCCC
Q 019822          217 ITHGMGVDYCFECTGV  232 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~  232 (335)
                      .....++|+++++.|.
T Consensus        82 ~~~~g~id~li~~ag~   97 (253)
T PRK07904         82 AFAGGDVDVAIVAFGL   97 (253)
T ss_pred             HHhcCCCCEEEEeeec
Confidence            3322379999987754

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.03  Score=49.07  Aligned_cols=81  Identities=20%  Similarity=0.204  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCC-ceEe--CCCCCCchhHHHHHHhhh-C
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM-TDFI--NPDDEPNKSISELVKGIT-H  219 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga-~~v~--~~~~~~~~~~~~~i~~~~-~  219 (335)
                      ..++++||+|+ |.+|..++..+...|+ +|+++++++++.+.+.+    .+. ..++  |-.+  ..++.+.+++.. .
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   83 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD--YQSIKAAVAHAETE   83 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHh
Confidence            35789999987 9999999999999999 99999998887655422    121 1222  3222  133333333321 1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      ..++|++|++.|.
T Consensus        84 ~~~~d~li~~ag~   96 (258)
T PRK06949         84 AGTIDILVNNSGV   96 (258)
T ss_pred             cCCCCEEEECCCC
Confidence            1268999998873

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.37  E-value=0.039  Score=49.44  Aligned_cols=43  Identities=26%  Similarity=0.243  Sum_probs=37.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      ..++++||+|+|+.+.+++.-+...|+++++++.|+.+|.+.+
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L  167 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL  167 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence            4578999999999999999888889998999999998887665

>PRK06196 oxidoreductase; Provisional

Probab=96.36  E-value=0.028  Score=51.09  Aligned_cols=79  Identities=18%  Similarity=0.284  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-Cce-EeCCCCCCchhHHHHHHhhhC-CCCcc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG-MTD-FINPDDEPNKSISELVKGITH-GMGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg-a~~-v~~~~~~~~~~~~~~i~~~~~-g~g~d  224 (335)
                      .++++||+|+ |.+|.+++..+...|+ +|++++++.++.+.+ +++. ... ..|-.+  .....+.+.+... ..++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD  101 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID  101 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence            4678999987 9999999998888999 999999988766543 3332 211 123332  1223333333221 12799


Q ss_pred             EEEEcCC
Q 019822          225 YCFECTG  231 (335)
Q Consensus       225 ~vid~~g  231 (335)
                      ++|++.|
T Consensus       102 ~li~nAg  108 (315)
T PRK06196        102 ILINNAG  108 (315)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.35  E-value=0.029  Score=49.93  Aligned_cols=78  Identities=14%  Similarity=0.286  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHH---HH-HhcCCceE--eCCCCCCchhHHHHHHhhhC-
Q 019822          150 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKE---KG-KAFGMTDF--INPDDEPNKSISELVKGITH-  219 (335)
Q Consensus       150 ~~~~VlI~G~-g--~vG~~ai~la~~~G~~~V~~~~~~~~~~~---~~-~~lga~~v--~~~~~~~~~~~~~~i~~~~~-  219 (335)
                      +++++||+|+ +  ++|.+.++.+...|+ +|+.++++++..+   .+ +++|....  .|-.+  ..+..+.+++... 
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~   82 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK   82 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence            5688999987 4  899999999999999 9998887653222   22 33453322  23332  2233333333221 


Q ss_pred             -CCCccEEEEcCC
Q 019822          220 -GMGVDYCFECTG  231 (335)
Q Consensus       220 -g~g~d~vid~~g  231 (335)
                       | .+|+++++.|
T Consensus        83 ~g-~iD~lVnnAG   94 (271)
T PRK06505         83 WG-KLDFVVHAIG   94 (271)
T ss_pred             hC-CCCEEEECCc
Confidence             3 6999999887

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.35  E-value=0.039  Score=49.22  Aligned_cols=95  Identities=21%  Similarity=0.302  Sum_probs=65.2

Q ss_pred             ccccchhhhhHHHHHhcC-CCCCCEEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCc
Q 019822          130 FLSCGFTTGYGAAWKEAK-VEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  207 (335)
Q Consensus       130 ~l~~~~~ta~~~l~~~~~-~~~~~~VlI~G~g~-vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~  207 (335)
                      .+||....... +.+..+ --.|++|+|+|.|. +|..++.++...|+ +|+++.+..                      
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t----------------------  192 (286)
T PRK14175        137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS----------------------  192 (286)
T ss_pred             CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence            34544333333 334444 35789999999855 99999999999999 998887431                      


Q ss_pred             hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .++.+.++      .+|+||.++|.+..+..  +.++++ ..++++|...
T Consensus       193 ~~l~~~~~------~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~  233 (286)
T PRK14175        193 KDMASYLK------DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP  233 (286)
T ss_pred             hhHHHHHh------hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence            11222222      58999999998865554  457886 8888988754

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.33  E-value=0.042  Score=47.23  Aligned_cols=96  Identities=25%  Similarity=0.245  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--EeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      -++.+||=+|+|+ |+++.-+|+ +|+ +|+++|-+++..+.++......  -++|..    ...+.+.+  .+..||+|
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~--~~~~FDvV  128 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLAS--AGGQFDVV  128 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHh--cCCCccEE
Confidence            5788999999864 666666665 778 9999999999999886543211  134543    22333322  23589999


Q ss_pred             EE-----cCCCh-HHHHHHHHhhccCCeEEEEEc
Q 019822          227 FE-----CTGVP-SLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       227 id-----~~g~~-~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      +.     =+..+ ..+..+.+.++|+ |.+...-
T Consensus       129 ~cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST  161 (243)
T COG2227         129 TCMEVLEHVPDPESFLRACAKLVKPG-GILFLST  161 (243)
T ss_pred             EEhhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence            85     23333 3667899999997 8776553

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.33  E-value=0.034  Score=52.00  Aligned_cols=98  Identities=19%  Similarity=0.203  Sum_probs=67.2

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      --.+.++||+|+|-+|..++..+...|..+|++..|+.++-+. ++++|+. ++..+         .+.....  .+|+|
T Consensus       175 ~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---------el~~~l~--~~DvV  242 (414)
T COG0373         175 SLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---------ELLEALA--EADVV  242 (414)
T ss_pred             ccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---------HHHHhhh--hCCEE
Confidence            3478899999999999999999999998899999999887665 5788843 22222         2222222  58999


Q ss_pred             EEcCCChHH-H--HHHHHhhccCCe-EEEEEccCC
Q 019822          227 FECTGVPSL-L--SEALETTKVGKG-KVIVIGVGV  257 (335)
Q Consensus       227 id~~g~~~~-~--~~~~~~l~~~~G-~~v~~g~~~  257 (335)
                      |.+++.+.. +  ......+..... -+++++.+-
T Consensus       243 issTsa~~~ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         243 ISSTSAPHPIITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             EEecCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence            999887632 1  344445554423 355665543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.32  E-value=0.028  Score=45.29  Aligned_cols=96  Identities=24%  Similarity=0.210  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce-EeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lga~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .++.+++|+|+|.+|...++.+...|..+|+++++++++.+. +++++... .....     +..    +.  -.++|+|
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~--~~~~Dvv   85 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL-----DLE----EL--LAEADLI   85 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec-----chh----hc--cccCCEE
Confidence            457889999999999999998888864489999998877665 45555321 01111     111    11  1379999


Q ss_pred             EEcCCChHH----HHHHHHhhccCCeEEEEEccC
Q 019822          227 FECTGVPSL----LSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       227 id~~g~~~~----~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +.|++....    .......++++ ..+++++..
T Consensus        86 i~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~  118 (155)
T cd01065          86 INTTPVGMKPGDELPLPPSLLKPG-GVVYDVVYN  118 (155)
T ss_pred             EeCcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcC
Confidence            999876521    11122345564 566666443

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.029  Score=50.53  Aligned_cols=79  Identities=19%  Similarity=0.240  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC--ce-E--eCCCCCCchhHHHHHHhhh--CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM--TD-F--INPDDEPNKSISELVKGIT--HG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga--~~-v--~~~~~~~~~~~~~~i~~~~--~g  220 (335)
                      +++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++.  .. .  .|-.+  ..+..+.+.+..  .+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence            5789999987 9999999999999999 999999988876654 44542  11 1  33332  122333333321  13


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                       ++|++|++.|.
T Consensus        85 -~id~vI~nAG~   95 (296)
T PRK05872         85 -GIDVVVANAGI   95 (296)
T ss_pred             -CCCEEEECCCc
Confidence             69999998874

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.31  E-value=0.052  Score=46.41  Aligned_cols=108  Identities=18%  Similarity=0.254  Sum_probs=75.2

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCce-EeCCCCCCchhHHHHHHhh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTD-FINPDDEPNKSISELVKGI  217 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lga~~-v~~~~~~~~~~~~~~i~~~  217 (335)
                      ..++..+.++||=+|.+ +|+.++.+|..+. -.+++.++.++++.+.++    +.|... |.-...   .+..+.+.+.
T Consensus        53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~---gdal~~l~~~  128 (219)
T COG4122          53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG---GDALDVLSRL  128 (219)
T ss_pred             HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec---CcHHHHHHhc
Confidence            34566788899988864 4888999998876 348999999999887764    456543 221111   2455666653


Q ss_pred             hCCCCccEEE-EcC--CChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          218 THGMGVDYCF-ECT--GVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       218 ~~g~g~d~vi-d~~--g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      ..+ .||+|| |+-  ..+..++.+++.|+++ |.++.=....
T Consensus       129 ~~~-~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~  169 (219)
T COG4122         129 LDG-SFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLF  169 (219)
T ss_pred             cCC-CccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeeccc
Confidence            334 899998 654  3567889999999997 8777655443

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.30  E-value=0.17  Score=42.91  Aligned_cols=82  Identities=28%  Similarity=0.393  Sum_probs=57.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -.+.+++|+|.|.+|..+++.+...|+ +|+++++++++.+.++ .+++. .++..+            +.. ..+|+++
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~------------l~~-~~~Dv~v   90 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE------------IYS-VDADVFA   90 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh------------hcc-ccCCEEE
Confidence            467899999999999999999999999 9999999888777664 44653 333321            111 2689999


Q ss_pred             EcCCChHHHHHHHHhhcc
Q 019822          228 ECTGVPSLLSEALETTKV  245 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~  245 (335)
                      -|......-...++.+..
T Consensus        91 p~A~~~~I~~~~~~~l~~  108 (200)
T cd01075          91 PCALGGVINDDTIPQLKA  108 (200)
T ss_pred             ecccccccCHHHHHHcCC
Confidence            665443233455566654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.034  Score=48.99  Aligned_cols=81  Identities=19%  Similarity=0.298  Sum_probs=52.7

Q ss_pred             CCCCCEEEEEcC-C-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----h-cCCceE----eCCCCCCchhHHHHHHh
Q 019822          148 VEKGSSVAVLGL-G-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMTDF----INPDDEPNKSISELVKG  216 (335)
Q Consensus       148 ~~~~~~VlI~G~-g-~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lga~~v----~~~~~~~~~~~~~~i~~  216 (335)
                      +.+++++||+|+ | ++|.++++.+...|+ +|+++++++++.+...    + ++...+    .|..+  +......+.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~   90 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA   90 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence            345789999986 6 799999999999999 8999998877665432    1 443222    23332  1223333322


Q ss_pred             hh--CCCCccEEEEcCCC
Q 019822          217 IT--HGMGVDYCFECTGV  232 (335)
Q Consensus       217 ~~--~g~g~d~vid~~g~  232 (335)
                      ..  .+ ++|++|++.|.
T Consensus        91 ~~~~~g-~id~li~~ag~  107 (262)
T PRK07831         91 AVERLG-RLDVLVNNAGL  107 (262)
T ss_pred             HHHHcC-CCCEEEECCCC
Confidence            21  13 68999999874

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.04  Score=47.24  Aligned_cols=77  Identities=21%  Similarity=0.300  Sum_probs=52.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      +++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.++..+... ..|-.+  ...+...+.++ .+.++|+++.+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~-~~~~~d~vi~~   77 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKL-DGEALDAAVYV   77 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHh-cCCCCCEEEEC
Confidence            46889986 9999999998878899 8999999888777776655432 233333  12233333333 33379999987


Q ss_pred             CCC
Q 019822          230 TGV  232 (335)
Q Consensus       230 ~g~  232 (335)
                      .|.
T Consensus        78 ag~   80 (222)
T PRK06953         78 AGV   80 (222)
T ss_pred             CCc
Confidence            764

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.28  E-value=0.033  Score=49.13  Aligned_cols=78  Identities=17%  Similarity=0.199  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc-eE--eCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT-DF--INPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~-~v--~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      +++++||+|+ +++|..+++.+...|+ +|+.+++++++.+.+. +++.. ..  .|-.+  ..+....+++..  .+ .
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g-~   80 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFG-K   80 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcC-C
Confidence            5678999987 9999999999999999 9999999888776653 33321 12  23222  122333333321  12 6


Q ss_pred             ccEEEEcCC
Q 019822          223 VDYCFECTG  231 (335)
Q Consensus       223 ~d~vid~~g  231 (335)
                      +|++|++.|
T Consensus        81 id~li~~ag   89 (263)
T PRK06200         81 LDCFVGNAG   89 (263)
T ss_pred             CCEEEECCC
Confidence            899999877

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.28  E-value=0.016  Score=51.84  Aligned_cols=94  Identities=19%  Similarity=0.169  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      ..+++++|+|+|++|.+++..++..|+.+|+++.++.++.+.+ ++++....+.. +   .+.    .+..  .++|+||
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~----~~~~--~~~DivI  190 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LEL----QEEL--ADFDLII  190 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccc----hhcc--ccCCEEE
Confidence            4567899999999999999999999966999999998887665 33432110111 1   001    1111  2689999


Q ss_pred             EcCCChHH-----HHHHHHhhccCCeEEEEE
Q 019822          228 ECTGVPSL-----LSEALETTKVGKGKVIVI  253 (335)
Q Consensus       228 d~~g~~~~-----~~~~~~~l~~~~G~~v~~  253 (335)
                      +|++....     .......+.+. ..++++
T Consensus       191 naTp~g~~~~~~~~~~~~~~l~~~-~~v~Di  220 (278)
T PRK00258        191 NATSAGMSGELPLPPLPLSLLRPG-TIVYDM  220 (278)
T ss_pred             ECCcCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence            99864310     01123456665 566665

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.28  E-value=0.019  Score=48.56  Aligned_cols=100  Identities=21%  Similarity=0.304  Sum_probs=63.2

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceEeCCCCCCchhHHHHHHhhhC
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      +.....++.+||-+|+|. |..++.+++. |. +|++++.+++-.+.+++.    +...+ ....   .++    .+..-
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~----~~~~~   92 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDL----NNLTF   92 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cCh----hhCCc
Confidence            444556778999999875 7778888875 77 999999999877766442    22211 1111   111    11111


Q ss_pred             CCCccEEEEcCC----C----hHHHHHHHHhhccCCeEEEEEcc
Q 019822          220 GMGVDYCFECTG----V----PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       220 g~g~d~vid~~g----~----~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ...+|+|+.+..    .    ...+..+.+.|+++ |.++.+..
T Consensus        93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~~  135 (197)
T PRK11207         93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVAA  135 (197)
T ss_pred             CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEEE
Confidence            236999997533    1    24567888899998 99665543

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.27  E-value=0.043  Score=49.82  Aligned_cols=91  Identities=26%  Similarity=0.451  Sum_probs=61.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      .+|.|+|.|.+|.+.+..++..|. .+|+++++++++.+.+++.|......      .+..+.+      .+.|+||.|+
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~------~~aDvViiav   74 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV------KGADLVILCV   74 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh------cCCCEEEECC
Confidence            579999999999999998888884 38999999999888888887532111      1111111      2589999999


Q ss_pred             CChHH---HHHHHHhhccCCeEEEEEcc
Q 019822          231 GVPSL---LSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       231 g~~~~---~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .....   +..+...++++ ..++.++.
T Consensus        75 p~~~~~~v~~~l~~~l~~~-~iv~dvgs  101 (307)
T PRK07502         75 PVGASGAVAAEIAPHLKPG-AIVTDVGS  101 (307)
T ss_pred             CHHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence            76422   33333445564 56666544

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.27  E-value=0.013  Score=52.30  Aligned_cols=45  Identities=20%  Similarity=0.240  Sum_probs=39.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  193 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  193 (335)
                      .++++++|+|+|+.+.+++.-++..|+++++++.|+.+|.+.+.+
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            357899999999999999999999998799999999998777643

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.24  E-value=0.01  Score=56.86  Aligned_cols=94  Identities=12%  Similarity=0.123  Sum_probs=61.8

Q ss_pred             HhcCCCCCCEEE----EEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eEeCCCCCCchhHHHHHHhh
Q 019822          144 KEAKVEKGSSVA----VLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       144 ~~~~~~~~~~Vl----I~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ...++++++++|    |+|+ |++|.+++|+++..|+ +|+++...+.+....+..+.+ .+++...   ..+.+.+...
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~  102 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL  102 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence            346677888887    7765 9999999999999999 999988666544333333433 4565554   3333333322


Q ss_pred             hCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          218 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .               ..+...++.+.++ |+++.++...
T Consensus       103 ~---------------~~~~~~l~~l~~~-griv~i~s~~  126 (450)
T PRK08261        103 Y---------------EFFHPVLRSLAPC-GRVVVLGRPP  126 (450)
T ss_pred             H---------------HHHHHHHHhccCC-CEEEEEcccc
Confidence            1               2445666777776 7888776554

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.028  Score=49.36  Aligned_cols=82  Identities=18%  Similarity=0.182  Sum_probs=53.9

Q ss_pred             cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCc--eE--eCCCCCCchhHHHHHH---h
Q 019822          146 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMT--DF--INPDDEPNKSISELVK---G  216 (335)
Q Consensus       146 ~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~--~v--~~~~~~~~~~~~~~i~---~  216 (335)
                      .+..++.++||+|+ |.+|..++..+...|+ +|+.+.++++..+.+.+ ..-.  .+  .|-.+  +......+.   +
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~   82 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVE   82 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHH
Confidence            34457889999987 9999999999999999 89999998776665433 2211  12  23332  122222222   2


Q ss_pred             hhCCCCccEEEEcCCC
Q 019822          217 ITHGMGVDYCFECTGV  232 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~  232 (335)
                      .. + ++|.||.+.|.
T Consensus        83 ~~-~-~~d~vi~~ag~   96 (264)
T PRK12829         83 RF-G-GLDVLVNNAGI   96 (264)
T ss_pred             Hh-C-CCCEEEECCCC
Confidence            22 2 69999998874

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.23  E-value=0.0071  Score=45.39  Aligned_cols=89  Identities=22%  Similarity=0.252  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+.+|||+|+|.+|..-++.+...|+ +|++++...   +..++. . ... .+     .+.    +..  .++++|+-+
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~~~-i-~~~-~~-----~~~----~~l--~~~~lV~~a   67 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSEGL-I-QLI-RR-----EFE----EDL--DGADLVFAA   67 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHHTS-C-EEE-ES-----S-G----GGC--TTESEEEE-
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhhhH-H-HHH-hh-----hHH----HHH--hhheEEEec
Confidence            57899999999999999999999999 999999765   222211 1 111 11     121    111  269999999


Q ss_pred             CCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          230 TGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      ++.+..-+.+....... +.++-+.+..
T Consensus        68 t~d~~~n~~i~~~a~~~-~i~vn~~D~p   94 (103)
T PF13241_consen   68 TDDPELNEAIYADARAR-GILVNVVDDP   94 (103)
T ss_dssp             SS-HHHHHHHHHHHHHT-TSEEEETT-C
T ss_pred             CCCHHHHHHHHHHHhhC-CEEEEECCCc
Confidence            99885545555555555 7777665543

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.039  Score=49.68  Aligned_cols=79  Identities=19%  Similarity=0.276  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.    +.+.. ..  .|-.+  .....+.+++..  -
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~  115 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD--LDAVDALVADVEKRI  115 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            3578999987 9999999999888899 9999999987765542    22322 12  23222  122333333221  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|++.|.
T Consensus       116 g-~id~li~~AG~  127 (293)
T PRK05866        116 G-GVDILINNAGR  127 (293)
T ss_pred             C-CCCEEEECCCC
Confidence            3 68999998874

>PRK04457 spermidine synthase; Provisional

Probab=96.22  E-value=0.059  Score=47.74  Aligned_cols=95  Identities=13%  Similarity=0.129  Sum_probs=65.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CC----c--eEeCCCCCCchhHHHHHHhhhCCC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GM----T--DFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga----~--~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .++++||++|+|+ |..+..+++.....+|++++.+++-.+.+++. +.    +  .++.      .|..+.+.+. . .
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~-~  135 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-R-H  135 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-C-C
Confidence            4567899999875 77888888877544999999999988888663 21    1  1222      2334444433 2 3


Q ss_pred             CccEEE-EcCCC---------hHHHHHHHHhhccCCeEEEEE
Q 019822          222 GVDYCF-ECTGV---------PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       222 g~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .+|+|+ |....         .+.++.+.+.|+++ |+++..
T Consensus       136 ~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin  176 (262)
T PRK04457        136 STDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN  176 (262)
T ss_pred             CCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence            799997 54322         35778999999998 998873

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.22  E-value=0.045  Score=46.45  Aligned_cols=35  Identities=26%  Similarity=0.314  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      .+.+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            56789999999999999999999999899999976

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.21  E-value=0.077  Score=50.86  Aligned_cols=79  Identities=15%  Similarity=0.219  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHH-HHhcCCce-EeCCCCCCchhHHHHHHhhhC-CCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP--WKKEK-GKAFGMTD-FINPDDEPNKSISELVKGITH-GMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~--~~~~~-~~~lga~~-v~~~~~~~~~~~~~~i~~~~~-g~g~  223 (335)
                      +++++||+|+ |++|..+++.+...|+ +|+.+++++  ++.+. .++++... .+|-.+  .......+..... ..++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCCC
Confidence            5788999987 9999999999999999 899888743  22222 34455432 234433  1222222222211 1168


Q ss_pred             cEEEEcCC
Q 019822          224 DYCFECTG  231 (335)
Q Consensus       224 d~vid~~g  231 (335)
                      |++|++.|
T Consensus       286 d~vi~~AG  293 (450)
T PRK08261        286 DIVVHNAG  293 (450)
T ss_pred             CEEEECCC
Confidence            99999987

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.21  E-value=0.046  Score=47.34  Aligned_cols=107  Identities=21%  Similarity=0.216  Sum_probs=76.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HhcCCceEeCCCCCCchhHHHHHHh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKG  216 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~  216 (335)
                      +....++.++++|+=.|.|+ |.+++-||++.|. .+|+..+..++..+.+    +++|....+....   .|    +++
T Consensus        86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~D----v~~  157 (256)
T COG2519          86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GD----VRE  157 (256)
T ss_pred             HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---cc----ccc
Confidence            34678999999999888764 8899999998875 5999999988876665    4455433222211   22    333


Q ss_pred             hhCCCCccEEE-EcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          217 ITHGMGVDYCF-ECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       217 ~~~g~g~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      ...+..+|.|| |--.-...++.+.+.|.++ |+++.+....
T Consensus       158 ~~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~v  198 (256)
T COG2519         158 GIDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPTV  198 (256)
T ss_pred             cccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCCH
Confidence            33344899887 6555557889999999998 9999997654

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.044  Score=48.26  Aligned_cols=80  Identities=16%  Similarity=0.229  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc--CC-ceE--eCCCCCCchhHHHHHHhhhCCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF--GM-TDF--INPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l--ga-~~v--~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      +++++||+|+ |.+|..++..+...|+ +|+++++++++.+.+. ++  +. ...  .|-.+  .....+.++......+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS--EAGREAVLARAREMGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHhcCC
Confidence            4678999986 9999999999888999 9999999887766553 22  21 112  22222  1222222222211237


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|.++++.|.
T Consensus        81 id~lv~~ag~   90 (263)
T PRK09072         81 INVLINNAGV   90 (263)
T ss_pred             CCEEEECCCC
Confidence            8999998774

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.038  Score=48.06  Aligned_cols=78  Identities=19%  Similarity=0.304  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHH---HHHHhhhCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSIS---ELVKGITHGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~---~~i~~~~~g~  221 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++++... .  .|..+  ..+..   +.+.+.. + 
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~-~-   79 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAF-G-   79 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHh-C-
Confidence            4678999987 9999999999999999 999999887766544 4455432 1  23222  12222   2222222 2 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|++.|.
T Consensus        80 ~id~vi~~ag~   90 (249)
T PRK06500         80 RLDAVFINAGV   90 (249)
T ss_pred             CCCEEEECCCC
Confidence            68999998763

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.15  E-value=0.16  Score=46.46  Aligned_cols=102  Identities=15%  Similarity=0.165  Sum_probs=68.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHH-HHcCCCEEEEEcCChhhHHHH-Hh----cCCceEeCCCCCCchhHHHHHHhhhCCCC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGA-RMHGAAKIIGIDKNPWKKEKG-KA----FGMTDFINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la-~~~G~~~V~~~~~~~~~~~~~-~~----lga~~v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      ...++++|+|+|..|...+..+ ...++++|.++++++++.+.+ ++    ++.. +....+     ..+.+      .+
T Consensus       125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~-----~~~~~------~~  192 (325)
T PRK08618        125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS-----ADEAI------EE  192 (325)
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC-----HHHHH------hc
Confidence            4567899999999998776554 466888999999998887654 32    3432 111221     22222      26


Q ss_pred             ccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchh
Q 019822          223 VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV  265 (335)
Q Consensus       223 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~  265 (335)
                      .|+|+.|+++... ... +.++++ -+++.+|.......+++.
T Consensus       193 aDiVi~aT~s~~p-~i~-~~l~~G-~hV~~iGs~~p~~~E~~~  232 (325)
T PRK08618        193 ADIIVTVTNAKTP-VFS-EKLKKG-VHINAVGSFMPDMQELPS  232 (325)
T ss_pred             CCEEEEccCCCCc-chH-HhcCCC-cEEEecCCCCcccccCCH
Confidence            8999999987633 233 788887 788899876654445554

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.14  E-value=0.027  Score=50.07  Aligned_cols=98  Identities=23%  Similarity=0.245  Sum_probs=71.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--EeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      ++.+|.|+|+|.+|.-++.+|-.+|+ +|...+.+.+|++.+..+-..+  ++-++.   .++.+.++      +.|++|
T Consensus       167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~---~~iee~v~------~aDlvI  236 (371)
T COG0686         167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTP---SNIEEAVK------KADLVI  236 (371)
T ss_pred             CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCH---HHHHHHhh------hccEEE
Confidence            45678888999999999999999999 9999999999999986643323  232222   33443333      589999


Q ss_pred             EcC---CC--hH-HHHHHHHhhccCCeEEEEEccCCC
Q 019822          228 ECT---GV--PS-LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       228 d~~---g~--~~-~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      .++   |.  +. ..++..+.+.++ +.++++....+
T Consensus       237 gaVLIpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG  272 (371)
T COG0686         237 GAVLIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG  272 (371)
T ss_pred             EEEEecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence            765   21  21 346779999997 99999875554

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.041  Score=49.00  Aligned_cols=80  Identities=14%  Similarity=0.155  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eE--eCCCCCCchhHHHHHHhhhCC-CCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DF--INPDDEPNKSISELVKGITHG-MGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~--~v--~~~~~~~~~~~~~~i~~~~~g-~g~  223 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+.+....  ..  .|-.+  .......+++.... .++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence            3568999987 9999999999988999 999999998887666443211  11  23332  12233333322111 158


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |+++++.|.
T Consensus        80 d~vv~~ag~   88 (277)
T PRK06180         80 DVLVNNAGY   88 (277)
T ss_pred             CEEEECCCc
Confidence            999998875

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.033  Score=48.76  Aligned_cols=73  Identities=14%  Similarity=0.097  Sum_probs=49.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eE--eCCCCCCchhHHHHHHhhhCCCC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DF--INPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      ++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+++    .+.. .+  .|..+   .   ..+++...+ +
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~---~~~~~~~~~-~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD---A---IDRAQAAEW-D   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC---H---HHHHHHhcC-C
Confidence            457999987 9999999999999999 99999988776554432    2321 11  23332   2   223333333 7


Q ss_pred             ccEEEEcCC
Q 019822          223 VDYCFECTG  231 (335)
Q Consensus       223 ~d~vid~~g  231 (335)
                      +|++|++.|
T Consensus        74 id~vi~~ag   82 (257)
T PRK09291         74 VDVLLNNAG   82 (257)
T ss_pred             CCEEEECCC
Confidence            999999877

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=96.12  E-value=0.05  Score=47.33  Aligned_cols=107  Identities=18%  Similarity=0.184  Sum_probs=68.1

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhh
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ....+..+.++||-+|.| .|..++.+++.++ ..+|+.++.+++..+.++    +.|...-+....   .+..+.+.++
T Consensus        61 ~~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l  136 (234)
T PLN02781         61 SMLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQL  136 (234)
T ss_pred             HHHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHH
Confidence            344566778899999975 3667777777653 349999999998777664    345322111111   3344444444


Q ss_pred             hC---CCCccEEE-EcC--CChHHHHHHHHhhccCCeEEEEEc
Q 019822          218 TH---GMGVDYCF-ECT--GVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       218 ~~---g~g~d~vi-d~~--g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ..   ...||+|| |+-  .....++.+++.++++ |.++.-.
T Consensus       137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn  178 (234)
T PLN02781        137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN  178 (234)
T ss_pred             HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence            21   24799998 542  2345678889999997 8877544

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.11  E-value=0.047  Score=47.51  Aligned_cols=80  Identities=19%  Similarity=0.191  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC--Cc-eE--eCCCCCCchhHHHHHHhh-hCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG--MT-DF--INPDDEPNKSISELVKGI-THGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg--a~-~v--~~~~~~~~~~~~~~i~~~-~~g~  221 (335)
                      ++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ..+.  .. ..  .|-.+  +..+...+++. ....
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD--EADVEAAVAAALERFG   80 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence            4678999987 9999999999988899 899999998776554 2222  11 12  23222  23333333322 1112


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|.+.|.
T Consensus        81 ~~d~vi~~ag~   91 (251)
T PRK07231         81 SVDILVNNAGT   91 (251)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.10  E-value=0.046  Score=51.33  Aligned_cols=91  Identities=23%  Similarity=0.285  Sum_probs=58.4

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHh--cC--Cc-eEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKA--FG--MT-DFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~--lg--a~-~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      |+|+|+|.+|..+++++...+-. +|++.+++.++.+.+.+  .+  .. ..+|..+     . +.+.++..  +.|+|+
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~-~~l~~~~~--~~dvVi   72 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----P-ESLAELLR--GCDVVI   72 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----H-HHHHHHHT--TSSEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----H-HHHHHHHh--cCCEEE
Confidence            68899999999999999877643 89999999999777643  22  11 2344433     2 22555544  469999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      +|+|.......+-.++..+ -.+++.
T Consensus        73 n~~gp~~~~~v~~~~i~~g-~~yvD~   97 (386)
T PF03435_consen   73 NCAGPFFGEPVARACIEAG-VHYVDT   97 (386)
T ss_dssp             E-SSGGGHHHHHHHHHHHT--EEEES
T ss_pred             ECCccchhHHHHHHHHHhC-CCeecc
Confidence            9998764445566667775 677773

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.044  Score=48.33  Aligned_cols=79  Identities=11%  Similarity=0.080  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-h---cCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A---FGMT-DF--INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~---lga~-~v--~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      +++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+. +   .+.. .+  .|..+  .....+.+.+... -
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   85 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF   85 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5789999987 8999999999988999 9999999887765442 2   2322 12  33333  1222222232211 1


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                      .++|++|++.|
T Consensus        86 ~~id~vi~~Ag   96 (263)
T PRK07814         86 GRLDIVVNNVG   96 (263)
T ss_pred             CCCCEEEECCC
Confidence            26999999886

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.042  Score=48.06  Aligned_cols=78  Identities=15%  Similarity=0.159  Sum_probs=50.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eEe--CCCCCCchhHHHHHHhhhC-CC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DFI--NPDDEPNKSISELVKGITH-GM  221 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-g~  221 (335)
                      ++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.    +.+.. ..+  |-.+  +....+.+.+... -.
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN--PEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence            468999987 9999999999999999 9999998887665442    22221 222  3222  2333333333211 12


Q ss_pred             CccEEEEcCC
Q 019822          222 GVDYCFECTG  231 (335)
Q Consensus       222 g~d~vid~~g  231 (335)
                      ++|++|++.|
T Consensus        78 ~id~lI~~ag   87 (252)
T PRK07677         78 RIDALINNAA   87 (252)
T ss_pred             CccEEEECCC
Confidence            6899999886

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.10  E-value=0.15  Score=43.42  Aligned_cols=91  Identities=16%  Similarity=0.142  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      .+++|||+|+|.+|..-++.+...|+ +|++++.... ..+.+.+.|--..+...-    . ...+      .++++||-
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~~~~----~-~~dl------~~~~lVi~   75 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLARCF----D-ADIL------EGAFLVIA   75 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEeCCC----C-HHHh------CCcEEEEE
Confidence            46799999999999999999999999 9999886543 233333334212222111    1 1111      26999999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEE
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      +++.+..-..+....... |..+-+
T Consensus        76 at~d~~ln~~i~~~a~~~-~ilvn~   99 (205)
T TIGR01470        76 ATDDEELNRRVAHAARAR-GVPVNV   99 (205)
T ss_pred             CCCCHHHHHHHHHHHHHc-CCEEEE
Confidence            999875444555555554 655543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.044  Score=47.98  Aligned_cols=79  Identities=16%  Similarity=0.214  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce---EeCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD---FINPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~---v~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+.    +.+...   ..|-.+  +....+.+.+..  -
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4789999987 9999999999999999 9999999887765542    223211   233332  123333333221  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|+++++.|.
T Consensus        85 g-~id~lv~~ag~   96 (253)
T PRK05867         85 G-GIDIAVCNAGI   96 (253)
T ss_pred             C-CCCEEEECCCC
Confidence            3 68999998763

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.09  E-value=0.059  Score=46.91  Aligned_cols=80  Identities=23%  Similarity=0.290  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHhcCCc-eE--eCCCCCCchhHHHHHHhhhC-CCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMT-DF--INPDDEPNKSISELVKGITH-GMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g~g  222 (335)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+++++..  .+.+++++.. ..  .|-.+  ..+....+++... ..+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD--IEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHcCC
Confidence            5789999987 9999999999998999 99999886521  2333444422 12  23332  2333333333221 126


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|+++++.|.
T Consensus        81 ~d~li~~ag~   90 (248)
T TIGR01832        81 IDILVNNAGI   90 (248)
T ss_pred             CCEEEECCCC
Confidence            8999998764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.09  E-value=0.043  Score=50.12  Aligned_cols=80  Identities=19%  Similarity=0.225  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-h----cCCce----EeCCCCCCchhHHHHHHhhhC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A----FGMTD----FINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~----lga~~----v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      .++++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+. +    .+...    ..|-.+ +..+..+.+.+..+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence            4789999997 9999998888888899 9999999998876542 2    22111    223221 01234445555445


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      +..+|+++++.|
T Consensus       130 ~~didilVnnAG  141 (320)
T PLN02780        130 GLDVGVLINNVG  141 (320)
T ss_pred             CCCccEEEEecC
Confidence            445779998876

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.07  E-value=0.046  Score=48.14  Aligned_cols=79  Identities=23%  Similarity=0.134  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCc-eE--eCCCCCCchhHHHHHHhhhC-CCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMT-DF--INPDDEPNKSISELVKGITH-GMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga~-~v--~~~~~~~~~~~~~~i~~~~~-g~g~  223 (335)
                      +++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+++. +.. ..  .|-.+  .....+.+++... -.++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence            4689999987 9999999999998999 999999988776666442 321 11  23322  1223333333221 1268


Q ss_pred             cEEEEcCC
Q 019822          224 DYCFECTG  231 (335)
Q Consensus       224 d~vid~~g  231 (335)
                      |++|++.|
T Consensus        81 d~li~~Ag   88 (262)
T TIGR03325        81 DCLIPNAG   88 (262)
T ss_pred             CEEEECCC
Confidence            99999876

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK01581 speE spermidine synthase; Validated

Probab=96.07  E-value=0.088  Score=48.48  Aligned_cols=100  Identities=13%  Similarity=0.070  Sum_probs=65.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-----------CceEeCCCCCCchhHHHHHHh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-----------MTDFINPDDEPNKSISELVKG  216 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-----------a~~v~~~~~~~~~~~~~~i~~  216 (335)
                      ....++|||+|+| .|.++..+++..+..+|++++.+++-.+.++++.           ...+ ...-   .|..+.+++
T Consensus       148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vvi---~Da~~fL~~  222 (374)
T PRK01581        148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVHV---CDAKEFLSS  222 (374)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEEE---CcHHHHHHh
Confidence            4556799999976 3667788888766569999999999888888531           0111 0000   223344443


Q ss_pred             hhCCCCccEEE-EcCCC----------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          217 ITHGMGVDYCF-ECTGV----------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       217 ~~~g~g~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .  ...+|+|| |....          .+.+..+.+.|+++ |.++.-..
T Consensus       223 ~--~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~  269 (374)
T PRK01581        223 P--SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN  269 (374)
T ss_pred             c--CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            2  23799998 54221          23567888999998 99877643

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.05  E-value=0.064  Score=48.25  Aligned_cols=37  Identities=22%  Similarity=0.310  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .++++++|+|+|++|.+++..+...|+++|+++.++.
T Consensus       124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            3567899999999999998888889996799999885

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.049  Score=47.86  Aligned_cols=78  Identities=17%  Similarity=0.158  Sum_probs=51.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cC-C-ce--EeCCCCCCchhHHHHHHhhhC--CCCc
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FG-M-TD--FINPDDEPNKSISELVKGITH--GMGV  223 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lg-a-~~--v~~~~~~~~~~~~~~i~~~~~--g~g~  223 (335)
                      +++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+ ++ . ..  ..|-.+  ..+..+.+++...  ..++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence            47899987 9999999998888999 99999998887766533 32 1 11  234333  1333333333211  2278


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |+++.+.|.
T Consensus        79 d~vi~~ag~   87 (260)
T PRK08267         79 DVLFNNAGI   87 (260)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.046  Score=47.81  Aligned_cols=80  Identities=18%  Similarity=0.176  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--E--eCCCCCCchhHHHHHHhhhC-CCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--F--INPDDEPNKSISELVKGITH-GMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~--v--~~~~~~~~~~~~~~i~~~~~-g~g~  223 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.++++++..+...++....  .  .|-.+  .......+.+... -.++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD--SQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence            5679999987 9999999999988999 8999998877655554432211  2  23222  1223332322211 1268


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|.+.|.
T Consensus        91 d~vi~~ag~   99 (255)
T PRK06841         91 DILVNSAGV   99 (255)
T ss_pred             CEEEECCCC
Confidence            999998874

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.02  E-value=0.099  Score=43.96  Aligned_cols=76  Identities=22%  Similarity=0.275  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-c----CCce-EeCCCCCCchhHHHHHHhhhCCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F----GMTD-FINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l----ga~~-v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .++.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+.+.+ +    +... ..+..+     . +.+.+..  +
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~-~~~~~~~--~   96 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-----D-AARAAAI--K   96 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-----H-HHHHHHH--h
Confidence            36789999986 9999998888888898 99999998887665432 2    2221 122222     1 1222222  2


Q ss_pred             CccEEEEcCCCh
Q 019822          222 GVDYCFECTGVP  233 (335)
Q Consensus       222 g~d~vid~~g~~  233 (335)
                      ++|+||.+++..
T Consensus        97 ~~diVi~at~~g  108 (194)
T cd01078          97 GADVVFAAGAAG  108 (194)
T ss_pred             cCCEEEECCCCC
Confidence            689999988765

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.01  E-value=0.058  Score=46.92  Aligned_cols=79  Identities=22%  Similarity=0.198  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+    ++.+...   ..|-.+  .....+.+++... .
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD--EEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 9999999999988999 899999988765543    2334321   123222  1223333333221 1


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                      .++|.+|++.|
T Consensus        81 ~~id~vi~~ag   91 (253)
T PRK08217         81 GQLNGLINNAG   91 (253)
T ss_pred             CCCCEEEECCC
Confidence            26899999887

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.01  E-value=0.087  Score=46.66  Aligned_cols=35  Identities=29%  Similarity=0.425  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      .+.+|+|+|.|++|..++..+...|..+++.++.+
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            56789999999999999999999998899999855

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.99  E-value=0.034  Score=53.61  Aligned_cols=77  Identities=26%  Similarity=0.405  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh---------------------hhHHHHHhcCCceEeCCCCCCch
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP---------------------WKKEKGKAFGMTDFINPDDEPNK  208 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~---------------------~~~~~~~~lga~~v~~~~~~~~~  208 (335)
                      .+++|+|+|+|+.|+.++..++..|. +|++++..+                     ...++++++|.+..++...  ..
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v--~~  216 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV--GR  216 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe--CC
Confidence            56899999999999999999999999 898887653                     2356678888765554432  01


Q ss_pred             hHHHHHHhhhCCCCccEEEEcCCCh
Q 019822          209 SISELVKGITHGMGVDYCFECTGVP  233 (335)
Q Consensus       209 ~~~~~i~~~~~g~g~d~vid~~g~~  233 (335)
                      +.  .+.++.  .++|.||.++|..
T Consensus       217 ~~--~~~~~~--~~~D~vilAtGa~  237 (467)
T TIGR01318       217 DI--SLDDLL--EDYDAVFLGVGTY  237 (467)
T ss_pred             cc--CHHHHH--hcCCEEEEEeCCC
Confidence            11  112222  2699999999975

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.98  E-value=0.063  Score=46.12  Aligned_cols=104  Identities=20%  Similarity=0.210  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh------hH--H---------------HHHhcCC-ceEeCCCCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW------KK--E---------------KGKAFGM-TDFINPDDE  205 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~------~~--~---------------~~~~lga-~~v~~~~~~  205 (335)
                      +.+.|+|+|.|+||..++..+...|+.++..++-+.=      |+  +               ..++... .+|...++ 
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~-  107 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND-  107 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence            5688999999999999999999999999988884431      11  1               1111221 12222222 


Q ss_pred             CchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH-hhccCCeEEEEEccCCC
Q 019822          206 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE-TTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       206 ~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~-~l~~~~G~~v~~g~~~~  258 (335)
                        .-..+.+.++... ++|+|+||..+-..=-.++. +.... =.++..+...+
T Consensus       108 --f~t~en~~~~~~~-~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag~  157 (263)
T COG1179         108 --FITEENLEDLLSK-GFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAGG  157 (263)
T ss_pred             --hhCHhHHHHHhcC-CCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccccC
Confidence              1124455566665 99999999986533223333 44443 45565554433

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.96  E-value=0.039  Score=43.52  Aligned_cols=34  Identities=26%  Similarity=0.430  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      ..+|+|+|+|++|..++..+...|..++..+|.+
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence            4689999999999999999999999899998844

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.95  E-value=0.057  Score=47.53  Aligned_cols=80  Identities=16%  Similarity=0.252  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHcCCCEEEEEcCChhhHH---HH-HhcCCceEeCCCCCCchhHHHHHHhhhC--C
Q 019822          150 KGSSVAVLGLG---TVGLGAVDGARMHGAAKIIGIDKNPWKKE---KG-KAFGMTDFINPDDEPNKSISELVKGITH--G  220 (335)
Q Consensus       150 ~~~~VlI~G~g---~vG~~ai~la~~~G~~~V~~~~~~~~~~~---~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~--g  220 (335)
                      .++++||+|++   ++|.++++.+...|+ +|+.++++++..+   .+ ++++....+.-+-.+..+..+.+.+...  |
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            46889999863   899999999988999 8988888754322   22 3344322222221111333333333221  3


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                       .+|+++++.|
T Consensus        88 -~ld~lv~nAg   97 (258)
T PRK07533         88 -RLDFLLHSIA   97 (258)
T ss_pred             -CCCEEEEcCc
Confidence             6899998876

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.055  Score=47.71  Aligned_cols=79  Identities=19%  Similarity=0.267  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----h-cCCce----EeCCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMTD----FINPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lga~~----v~~~~~~~~~~~~~~i~~~~-  218 (335)
                      .++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    + .+...    ..|-.+  .....+.+.+.. 
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   83 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA   83 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence            4688999987 9999999999999999 9999999887765432    1 11111    123332  122323333221 


Q ss_pred             -CCCCccEEEEcCCC
Q 019822          219 -HGMGVDYCFECTGV  232 (335)
Q Consensus       219 -~g~g~d~vid~~g~  232 (335)
                       -+ ++|+++++.|.
T Consensus        84 ~~g-~id~li~~Ag~   97 (265)
T PRK07062         84 RFG-GVDMLVNNAGQ   97 (265)
T ss_pred             hcC-CCCEEEECCCC
Confidence             13 68999998873

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.93  E-value=0.067  Score=47.01  Aligned_cols=76  Identities=24%  Similarity=0.308  Sum_probs=49.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceEe--CCCCCCchhHHHHHHhhh--CCCCc
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDFI--NPDDEPNKSISELVKGIT--HGMGV  223 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~v~--~~~~~~~~~~~~~i~~~~--~g~g~  223 (335)
                      ++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+..+.+  |-.+  ..+..+.+++..  .+ ++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~~~~~~~~~~~~~g-~i   77 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD--KDDLKNLVKEAWELLG-GI   77 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC--HHHHHHHHHHHHHhcC-CC
Confidence            6899987 9999999999988999 999999988765543    222322222  3222  123333333321  13 68


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|++.|.
T Consensus        78 d~li~naG~   86 (259)
T PRK08340         78 DALVWNAGN   86 (259)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.19  Score=44.47  Aligned_cols=77  Identities=17%  Similarity=0.236  Sum_probs=48.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce----EeCCCCCCchhHHHHHHhhh-CCCC
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD----FINPDDEPNKSISELVKGIT-HGMG  222 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~----v~~~~~~~~~~~~~~i~~~~-~g~g  222 (335)
                      +++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+    +..+...    ..|-.+  .......+.+.. ...+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS   78 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence            6899987 9999999999988999 899999887765443    2334321    234333  122222222221 1126


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|++.|.
T Consensus        79 id~lv~~ag~   88 (272)
T PRK07832         79 MDVVMNIAGI   88 (272)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.90  E-value=0.063  Score=47.35  Aligned_cols=79  Identities=19%  Similarity=0.299  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceE--eCCCCCCchhHHHHHHhhhC
Q 019822          149 EKGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF--INPDDEPNKSISELVKGITH  219 (335)
Q Consensus       149 ~~~~~VlI~G~-g--~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~v--~~~~~~~~~~~~~~i~~~~~  219 (335)
                      -.++.+||+|+ +  ++|.++++.+...|+ +|+.+++++...+.+    ++.|....  .|-.+  +.+..+.+++...
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHH
Confidence            35688999987 4  799999988888999 898888764222222    23343222  34332  2333333333221


Q ss_pred             --CCCccEEEEcCC
Q 019822          220 --GMGVDYCFECTG  231 (335)
Q Consensus       220 --g~g~d~vid~~g  231 (335)
                        | .+|+++++.|
T Consensus        83 ~~g-~iDilVnnag   95 (260)
T PRK06603         83 KWG-SFDFLLHGMA   95 (260)
T ss_pred             HcC-CccEEEEccc
Confidence              3 6999998776

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=95.90  E-value=0.073  Score=47.49  Aligned_cols=98  Identities=14%  Similarity=0.145  Sum_probs=66.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCce--EeCCCCC-CchhHHHHHHhhhCCCCccEEE
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTD--FINPDDE-PNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga~~--v~~~~~~-~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      ++|||+|+|. |..+-.++++...+++++++.+++-.++++++ +...  -.|++-+ ...|-.+.+++...  ++|+||
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~--~fDvIi  154 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE--KFDVII  154 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC--cCCEEE
Confidence            5999998654 66777888888877999999999988888763 2110  0011110 01334455555433  799997


Q ss_pred             -EcCCC---------hHHHHHHHHhhccCCeEEEEE
Q 019822          228 -ECTGV---------PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       228 -d~~g~---------~~~~~~~~~~l~~~~G~~v~~  253 (335)
                       |++..         ...++.+-++|+++ |.++.-
T Consensus       155 ~D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q  189 (282)
T COG0421         155 VDSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ  189 (282)
T ss_pred             EcCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence             66644         45778999999998 988877

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.075  Score=46.66  Aligned_cols=78  Identities=12%  Similarity=0.062  Sum_probs=50.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCC--c-eE--eCCCCCCchhHHHHHHhhhCC-CC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGM--T-DF--INPDDEPNKSISELVKGITHG-MG  222 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga--~-~v--~~~~~~~~~~~~~~i~~~~~g-~g  222 (335)
                      ..++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+.+ +..  . ..  .|-.+  .....+.+++.... ..
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence            468999987 9999999999888899 99999998877665432 221  1 11  23332  23333333332211 15


Q ss_pred             ccEEEEcCC
Q 019822          223 VDYCFECTG  231 (335)
Q Consensus       223 ~d~vid~~g  231 (335)
                      +|+++++.|
T Consensus        79 id~lv~~ag   87 (257)
T PRK07024         79 PDVVIANAG   87 (257)
T ss_pred             CCEEEECCC
Confidence            899999876

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.075  Score=45.93  Aligned_cols=79  Identities=16%  Similarity=0.085  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhC--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH--  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~--  219 (335)
                      +++++||+|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+    ++.+.+. .  .|-.+  .....+.+.+...  
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS--QESIRHLFDAIEQQF   80 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            4678999987 8999999988888999 999999988876544    2334321 1  23222  2333333333221  


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      +..+|++|++.|
T Consensus        81 g~~iD~li~nag   92 (227)
T PRK08862         81 NRAPDVLVNNWT   92 (227)
T ss_pred             CCCCCEEEECCc
Confidence            226999999886

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.86  E-value=0.039  Score=45.37  Aligned_cols=93  Identities=18%  Similarity=0.297  Sum_probs=61.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--ceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      +|.|+|+ |-+|...++=|+..|. +|+++.++++|....+..-+  ..|++...     .++.+      .|+|+||++
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~~-----~a~~l------~g~DaVIsA   69 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLTS-----LASDL------AGHDAVISA   69 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChhh-----hHhhh------cCCceEEEe
Confidence            5788987 9999999999999999 99999999998866432211  11332221     22222      279999998


Q ss_pred             CCCh--H-------HHHHHHHhhccC-CeEEEEEccCC
Q 019822          230 TGVP--S-------LLSEALETTKVG-KGKVIVIGVGV  257 (335)
Q Consensus       230 ~g~~--~-------~~~~~~~~l~~~-~G~~v~~g~~~  257 (335)
                      .+..  +       ..+.++..++.- .-|+..+|...
T Consensus        70 ~~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          70 FGAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             ccCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            8754  1       123355556552 24788887554

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.86  E-value=0.15  Score=41.35  Aligned_cols=83  Identities=12%  Similarity=0.158  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      -.+.+|||+|+|.+|..-++.+...|+ +|.+++  ++..+.+++++.... ..+.     +.+.     +=.++|+|+-
T Consensus        11 l~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~-----~~~~-----dl~~a~lVia   76 (157)
T PRK06719         11 LHNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKT-----FSND-----DIKDAHLIYA   76 (157)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eecc-----cChh-----cCCCceEEEE
Confidence            357899999999999999998888999 888885  333344444542221 1221     1100     1136899999


Q ss_pred             cCCChHHHHHHHHhhccC
Q 019822          229 CTGVPSLLSEALETTKVG  246 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~  246 (335)
                      +++..+ ++..+...+..
T Consensus        77 aT~d~e-~N~~i~~~a~~   93 (157)
T PRK06719         77 ATNQHA-VNMMVKQAAHD   93 (157)
T ss_pred             CCCCHH-HHHHHHHHHHH
Confidence            998874 56655555553

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.86  E-value=0.073  Score=46.66  Aligned_cols=78  Identities=18%  Similarity=0.266  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eE--eCCCCCCchhHHHHHHhhh--CC
Q 019822          150 KGSSVAVLGLG---TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DF--INPDDEPNKSISELVKGIT--HG  220 (335)
Q Consensus       150 ~~~~VlI~G~g---~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~--~v--~~~~~~~~~~~~~~i~~~~--~g  220 (335)
                      .++++||+|++   ++|.++++.+...|+ +|+.++++++..+.++++...  ..  .|-.+  +.+..+.+++..  .+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS--DESIERAFATIKERVG   82 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC--HHHHHHHHHHHHHHhC
Confidence            57889999863   899999999988999 999998875444444444211  12  23222  123333333322  13


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                       .+|+++++.|
T Consensus        83 -~iD~lv~nAg   92 (252)
T PRK06079         83 -KIDGIVHAIA   92 (252)
T ss_pred             -CCCEEEEccc
Confidence             6999998876

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.068  Score=46.75  Aligned_cols=80  Identities=20%  Similarity=0.179  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      +++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+    ++.+... .  .|-.+  +....+.+++... -
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF   81 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence            4678999987 9999999999988999 999999988776554    2233221 2  23332  1222223332211 1


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|++|++.|.
T Consensus        82 ~~id~li~~ag~   93 (254)
T PRK07478         82 GGLDIAFNNAGT   93 (254)
T ss_pred             CCCCEEEECCCC
Confidence            268999998873

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.79  E-value=0.044  Score=46.22  Aligned_cols=101  Identities=17%  Similarity=0.282  Sum_probs=61.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceEeCCCCCCchhHHHHHHhh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      +.+.....++.+||-+|+|. |..+..+++ .|. +|++++.+++-.+.+++.    +..  +....   .+... . .+
T Consensus        22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~-~-~~   91 (195)
T TIGR00477        22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA-A-AL   91 (195)
T ss_pred             HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh-c-cc
Confidence            34445555677899999864 777777776 477 999999998877765432    322  11110   11110 0 11


Q ss_pred             hCCCCccEEEEcCC-----C---hHHHHHHHHhhccCCeEEEEEcc
Q 019822          218 THGMGVDYCFECTG-----V---PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       218 ~~g~g~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                       .+ .+|+|+.+..     .   ...++.+.+.|+++ |.++.+..
T Consensus        92 -~~-~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~~  134 (195)
T TIGR00477        92 -NE-DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVAA  134 (195)
T ss_pred             -cC-CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEEe
Confidence             23 6999986422     1   24677888899998 98655543

Part of a tellurite-reducing operon tehA and tehB

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.78  E-value=0.072  Score=49.01  Aligned_cols=36  Identities=19%  Similarity=0.366  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+|+|+|+|++|..++..+...|..++..+|.+.
T Consensus        23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            457899999999999999999999998999999764

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.77  E-value=0.09  Score=45.54  Aligned_cols=36  Identities=28%  Similarity=0.357  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+|+|+|+|++|..++..+...|..+++.+|.+.
T Consensus        20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~   55 (228)
T cd00757          20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV   55 (228)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            357899999999999999999999998998887543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK05717 oxidoreductase; Validated

Probab=95.76  E-value=0.079  Score=46.43  Aligned_cols=80  Identities=19%  Similarity=0.173  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-e--EeCCCCCCchhHHHHHHhhhCC-CCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-D--FINPDDEPNKSISELVKGITHG-MGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~--v~~~~~~~~~~~~~~i~~~~~g-~g~  223 (335)
                      .++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++++.. .  ..|-.+  .......+.+.... .++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence            4678999987 9999999999988999 999998877655443 444422 1  123332  12232223332211 158


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|.+.|.
T Consensus        86 d~li~~ag~   94 (255)
T PRK05717         86 DALVCNAAI   94 (255)
T ss_pred             CEEEECCCc
Confidence            999998773

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.76  E-value=0.081  Score=46.71  Aligned_cols=80  Identities=16%  Similarity=0.136  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhhC-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGITH-  219 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-  219 (335)
                      .+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+..    .+.+.. ..  +|..+  ..+....+++... 
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~   83 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADE   83 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence            35789999987 9999999999999999 999999887765433    222322 11  23332  1333333333221 


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      -.++|++|.+.|
T Consensus        84 ~~~iD~vi~~ag   95 (264)
T PRK07576         84 FGPIDVLVSGAA   95 (264)
T ss_pred             cCCCCEEEECCC
Confidence            126899998775

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.75  E-value=0.058  Score=54.16  Aligned_cols=77  Identities=26%  Similarity=0.359  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHhcCCceEeCCCCCCch
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW---------------------KKEKGKAFGMTDFINPDDEPNK  208 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~  208 (335)
                      .+++|+|+|+|+.|+.++..++..|+ +|+++++.+.                     +.++++++|.+..++.......
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            47899999999999999999999999 8999886652                     4566678887765554320001


Q ss_pred             hHHHHHHhhhCCCCccEEEEcCCCh
Q 019822          209 SISELVKGITHGMGVDYCFECTGVP  233 (335)
Q Consensus       209 ~~~~~i~~~~~g~g~d~vid~~g~~  233 (335)
                      .+    .++.  .++|.||.++|..
T Consensus       388 ~~----~~l~--~~~DaV~latGa~  406 (639)
T PRK12809        388 TF----SDLT--SEYDAVFIGVGTY  406 (639)
T ss_pred             CH----HHHH--hcCCEEEEeCCCC
Confidence            12    2222  2699999999864

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.11  Score=45.67  Aligned_cols=77  Identities=17%  Similarity=0.275  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----h-cCCc-eE--eCCCCCCchhHHHHHHhhhCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMT-DF--INPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lga~-~v--~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      .++++||+|+ +++|..+++.+...|+ +|+++++++++.+.+.    + .+.. ..  .|-.+  ..+....+++.  +
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~--g   80 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAEA--G   80 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHh--C
Confidence            4689999987 9999999999988999 9999999887665532    1 1221 22  23222  12333333322  3


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                       .+|++|++.|.
T Consensus        81 -~id~lv~~ag~   91 (259)
T PRK06125         81 -DIDILVNNAGA   91 (259)
T ss_pred             -CCCEEEECCCC
Confidence             69999998874

>PRK06128 oxidoreductase; Provisional

Probab=95.72  E-value=0.12  Score=46.68  Aligned_cols=79  Identities=19%  Similarity=0.144  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hH----HHHHhcCCce-E--eCCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW--KK----EKGKAFGMTD-F--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~--~~----~~~~~lga~~-v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      .++++||+|+ |.+|.+++..+...|+ +|+.+.++.+  +.    +.+++.+... .  .|-.+  .....+.+.+.. 
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  130 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK  130 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence            5689999987 9999999999988999 8887765432  11    2233344322 1  23322  122223333221 


Q ss_pred             -CCCCccEEEEcCCC
Q 019822          219 -HGMGVDYCFECTGV  232 (335)
Q Consensus       219 -~g~g~d~vid~~g~  232 (335)
                       -+ ++|++|++.|.
T Consensus       131 ~~g-~iD~lV~nAg~  144 (300)
T PRK06128        131 ELG-GLDILVNIAGK  144 (300)
T ss_pred             HhC-CCCEEEECCcc
Confidence             12 69999998873

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.72  E-value=0.042  Score=46.57  Aligned_cols=35  Identities=29%  Similarity=0.421  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      ...+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus        20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            45789999999999999999999999889999977

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.71  E-value=0.16  Score=39.66  Aligned_cols=88  Identities=23%  Similarity=0.311  Sum_probs=54.2

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcC--CCEEEEEcCCh--hhH-HHHHhcCCceEeCCCCCCchhHHHHHH------------
Q 019822          154 VAVLGL-GTVGLGAVDGARMHG--AAKIIGIDKNP--WKK-EKGKAFGMTDFINPDDEPNKSISELVK------------  215 (335)
Q Consensus       154 VlI~G~-g~vG~~ai~la~~~G--~~~V~~~~~~~--~~~-~~~~~lga~~v~~~~~~~~~~~~~~i~------------  215 (335)
                      |.|+|+ |++|..+.++.+...  + +|++..-..  +++ +.+++|.+..++-.++    ...+.++            
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~----~~~~~l~~~~~~~~~~~~v   75 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE----EAYEELKKALPSKGPGIEV   75 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH----HHHHHHHHHHHHTTSSSEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHHhhhcCCCCEE
Confidence            567898 999999999999887  6 776665333  222 2346777777665543    2222222            


Q ss_pred             --------hhhCCCCccEEEEcCCChHHHHHHHHhhccC
Q 019822          216 --------GITHGMGVDYCFECTGVPSLLSEALETTKVG  246 (335)
Q Consensus       216 --------~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~  246 (335)
                              ++.....+|+|+.++.+-..+.-.+.++..+
T Consensus        76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g  114 (129)
T PF02670_consen   76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG  114 (129)
T ss_dssp             EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred             EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence                    2222246888888777666777888888774

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.70  E-value=0.089  Score=46.81  Aligned_cols=92  Identities=16%  Similarity=0.102  Sum_probs=58.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC---CceEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG---MTDFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg---a~~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      .++++++|+|+|++|.+++..+...|+ +|+++++++++.+.+ +++.   ........            +.. -..+|
T Consensus       115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~------------~~~-~~~~D  180 (270)
T TIGR00507       115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD------------ELP-LHRVD  180 (270)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh------------hhc-ccCcc
Confidence            457889999999999999988888898 999999988776554 3332   11121111            111 12689


Q ss_pred             EEEEcCCCh--HHH---HHHHHhhccCCeEEEEEcc
Q 019822          225 YCFECTGVP--SLL---SEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       225 ~vid~~g~~--~~~---~~~~~~l~~~~G~~v~~g~  255 (335)
                      +||+|++..  ...   ......+.++ ..++++.-
T Consensus       181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y  215 (270)
T TIGR00507       181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY  215 (270)
T ss_pred             EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence            999998753  111   1113446665 56666643

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.097  Score=45.35  Aligned_cols=80  Identities=11%  Similarity=0.067  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DF--INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      ..+++||+|+ |.+|..++..+...|+ +|+++++++++.+.+.    +.+.. ..  .|-.+  .......+++... .
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQF   81 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4578999987 9999999999988999 9999999887665442    22221 12  23222  1333333333221 1


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|+++++.|.
T Consensus        82 ~~id~lv~~ag~   93 (241)
T PRK07454         82 GCPDVLINNAGM   93 (241)
T ss_pred             CCCCEEEECCCc
Confidence            258999998874

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.69  E-value=0.22  Score=43.25  Aligned_cols=106  Identities=19%  Similarity=0.207  Sum_probs=74.0

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceEeCCCCCCchhHHHHHHhh-
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGI-  217 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~-  217 (335)
                      ....+..+|.+||=+|+|+ |-.+..+++..|-.+|+++|.|++-++.+++-    |... +..-.   .    ...++ 
T Consensus        44 i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~---~----dAe~LP  114 (238)
T COG2226          44 ISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV---G----DAENLP  114 (238)
T ss_pred             HHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE---e----chhhCC
Confidence            3445566899999998774 89999999999866999999999988887542    2221 11000   1    11121 


Q ss_pred             hCCCCccEEEEcCCC------hHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          218 THGMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       218 ~~g~g~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      .....||+|.-+.|-      +..+.++.+.|.|+ |+++.+.....
T Consensus       115 f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p  160 (238)
T COG2226         115 FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP  160 (238)
T ss_pred             CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence            233478998776652      35789999999998 99998877654

>PRK06194 hypothetical protein; Provisional

Probab=95.68  E-value=0.048  Score=48.67  Aligned_cols=80  Identities=18%  Similarity=0.211  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCce-Ee--CCCCCCchhHHHHHHhhh-CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---GMTD-FI--NPDDEPNKSISELVKGIT-HG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---ga~~-v~--~~~~~~~~~~~~~i~~~~-~g  220 (335)
                      .++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+ +++   +... ++  |-.+  ..++.+.+.+.. ..
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~   81 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD--AAQVEALADAALERF   81 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            3578999987 9999999999888999 999999887665443 222   3221 12  3222  122322222221 11


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|++|++.|.
T Consensus        82 g~id~vi~~Ag~   93 (287)
T PRK06194         82 GAVHLLFNNAGV   93 (287)
T ss_pred             CCCCEEEECCCC
Confidence            268999998874

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.67  E-value=0.27  Score=41.74  Aligned_cols=90  Identities=14%  Similarity=0.089  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      .+.+|||+|+|.+|...+..+...|+ +|+++++... ....+.+.+.-. +....   .. ...+      .++|+||-
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~-~~~~~---~~-~~~l------~~adlVia   76 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIR-WKQKE---FE-PSDI------VDAFLVIA   76 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEE-EEecC---CC-hhhc------CCceEEEE
Confidence            57899999999999999988888998 8988875432 222222222111 11111   00 0011      26899999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEE
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      +++.+. ++..+...+.. +.++-+
T Consensus        77 aT~d~e-lN~~i~~~a~~-~~lvn~   99 (202)
T PRK06718         77 ATNDPR-VNEQVKEDLPE-NALFNV   99 (202)
T ss_pred             cCCCHH-HHHHHHHHHHh-CCcEEE
Confidence            999884 45555555554 545444

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.67  E-value=0.28  Score=41.31  Aligned_cols=104  Identities=18%  Similarity=0.280  Sum_probs=64.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce--EeCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i~  215 (335)
                      +.......++++||=+|+|. |..++.+++.....+|++++.+++..+.++    +++...  ++..+      ..+.+.
T Consensus        32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d------~~~~~~  104 (196)
T PRK07402         32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGS------APECLA  104 (196)
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECc------hHHHHh
Confidence            34556677889998888753 556666776543239999999998877664    355432  23222      222222


Q ss_pred             hhhCCCCccEE-EEcCCC-hHHHHHHHHhhccCCeEEEEEcc
Q 019822          216 GITHGMGVDYC-FECTGV-PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       216 ~~~~g~g~d~v-id~~g~-~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .+..  .+|.+ ++.... ...++.+.+.|+++ |+++....
T Consensus       105 ~~~~--~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        105 QLAP--APDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             hCCC--CCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence            2221  24444 443322 35678899999997 99888754

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.66  E-value=0.099  Score=46.60  Aligned_cols=104  Identities=15%  Similarity=0.233  Sum_probs=64.5

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHH-HhcCCceE--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPW---KKEKG-KAFGMTDF--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~~---~~~~~-~~lga~~v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+   +++|+++++.+...|+ +|+.++++++   +.+.+ ++++....  .|-.+  .....+.+++..  
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~   80 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD   80 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence            4688999986   4899999999888999 9998888753   22222 34453222  34333  133333333332  


Q ss_pred             CCCCccEEEEcCCCh--------------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          219 HGMGVDYCFECTGVP--------------S---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       219 ~g~g~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      .+ ++|++|++.|..              +               ..+.+++.+..+ |+++.++...+
T Consensus        81 ~g-~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~~  147 (274)
T PRK08415         81 LG-KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLGG  147 (274)
T ss_pred             cC-CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCCC
Confidence            13 689999988731              0               123445566676 89988876543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.66  E-value=0.1  Score=45.03  Aligned_cols=79  Identities=11%  Similarity=0.146  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHhcCCceE-eCCCCCCchhHHHHHHhhhCC-CCccEE
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDF-INPDDEPNKSISELVKGITHG-MGVDYC  226 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g-~g~d~v  226 (335)
                      ++++||+|+ +++|.++++.+...|+ +|+.+++++++. +.+++.+...+ .|-.+  .....+.+.+.... .++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence            468999987 9999999999988999 999998876543 33444553221 23222  12333333332211 158999


Q ss_pred             EEcCCC
Q 019822          227 FECTGV  232 (335)
Q Consensus       227 id~~g~  232 (335)
                      +++.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            998763

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.66  E-value=0.095  Score=45.98  Aligned_cols=80  Identities=20%  Similarity=0.257  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DF--INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.    +.+.. ..  .|-.+  ...+...+.++.. -
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~   87 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF   87 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            5689999987 9999999999988999 9999999887765542    22321 12  23332  1223222222211 1


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|.+|.+.|.
T Consensus        88 ~~id~vi~~ag~   99 (259)
T PRK08213         88 GHVDILVNNAGA   99 (259)
T ss_pred             CCCCEEEECCCC
Confidence            268999998763

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.062  Score=46.55  Aligned_cols=41  Identities=22%  Similarity=0.246  Sum_probs=35.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      ++++++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~   46 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKV   46 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHH
Confidence            4678999987 9999999999988999 999999988766543

>PLN00203 glutamyl-tRNA reductase

Probab=95.63  E-value=0.11  Score=50.66  Aligned_cols=73  Identities=18%  Similarity=0.230  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-Cce-EeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG-MTD-FINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg-a~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+ .+++ ... +....         .+.+...  +.|+|
T Consensus       265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~---------dl~~al~--~aDVV  333 (519)
T PLN00203        265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD---------EMLACAA--EADVV  333 (519)
T ss_pred             CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh---------hHHHHHh--cCCEE
Confidence            368999999999999999999999987899999998887665 4453 221 11111         1222222  68999


Q ss_pred             EEcCCCh
Q 019822          227 FECTGVP  233 (335)
Q Consensus       227 id~~g~~  233 (335)
                      |.|++.+
T Consensus       334 IsAT~s~  340 (519)
T PLN00203        334 FTSTSSE  340 (519)
T ss_pred             EEccCCC
Confidence            9998764

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.61  E-value=0.16  Score=44.70  Aligned_cols=99  Identities=22%  Similarity=0.242  Sum_probs=66.3

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ceEeCCCCCCchhHHHHHHhhhCCC
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .......++++||=+|+|. |..+..+++..+..+|++++.+++..+.+++.-. ..++..+      .    .++....
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d------~----~~~~~~~   92 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD------I----ASWQPPQ   92 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc------h----hccCCCC
Confidence            3445667889999999864 7777888877643499999999988888765422 1122111      1    1112223


Q ss_pred             CccEEEEcCC------ChHHHHHHHHhhccCCeEEEEE
Q 019822          222 GVDYCFECTG------VPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       222 g~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .+|+|+....      ....+..+.+.|+++ |+++..
T Consensus        93 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~  129 (258)
T PRK01683         93 ALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ  129 (258)
T ss_pred             CccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence            7999985433      124678889999997 998775

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.61  E-value=0.069  Score=46.78  Aligned_cols=73  Identities=19%  Similarity=0.347  Sum_probs=47.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceE--eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDF--INPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lga~~v--~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++. +.+... .+....  .|-.+   .   +.+.+..+  ++|+
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~---~---~~~~~~~~--~iDi   82 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGK---E---ESLDKQLA--SLDV   82 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCC---H---HHHHHhcC--CCCE
Confidence            3578999987 9999999999988999 9999988762 222211 111122  23332   1   22333332  5999


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      +|++.|.
T Consensus        83 lVnnAG~   89 (245)
T PRK12367         83 LILNHGI   89 (245)
T ss_pred             EEECCcc
Confidence            9998874

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.60  E-value=0.11  Score=45.10  Aligned_cols=36  Identities=36%  Similarity=0.473  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+|+|+|.|++|..++..+...|..+++.+|.+.
T Consensus        10 ~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755          10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             hCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            346899999999999999999999999999998654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.08  Score=46.42  Aligned_cols=81  Identities=21%  Similarity=0.234  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCce---EeCCCCCCchhHHHHHHhhh--
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKAFGMTD---FINPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~lga~~---v~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++++|+|+ |.+|..+++.+...|++.|++++++.++.+.    +++.+...   ..|..+  +..+.+.+....  
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   81 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA   81 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            35688999987 9999999999999999349999988765542    23344322   223332  122333232221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -+ ++|.+|++.+.
T Consensus        82 ~g-~id~li~~ag~   94 (260)
T PRK06198         82 FG-RLDALVNAAGL   94 (260)
T ss_pred             hC-CCCEEEECCCc
Confidence            13 69999998874

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.1  Score=44.89  Aligned_cols=74  Identities=19%  Similarity=0.180  Sum_probs=49.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      +++|+|+ |.+|.++++.+...|+ +|+.+++++++.+.+ ++++...+ .|-.+  ..+..+.++++. + .+|+++++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~-~id~lv~~   76 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLFP-H-HLDTIVNV   76 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHHh-h-cCcEEEEC
Confidence            4889987 9999999999988999 999999988877654 44444322 34333  122333333332 2 68999987


Q ss_pred             CC
Q 019822          230 TG  231 (335)
Q Consensus       230 ~g  231 (335)
                      .|
T Consensus        77 ag   78 (223)
T PRK05884         77 PA   78 (223)
T ss_pred             CC
Confidence            64

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.60  E-value=0.095  Score=45.96  Aligned_cols=40  Identities=23%  Similarity=0.187  Sum_probs=33.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      ++++||+|+ |.+|.+++..+...|+ +|+.++++.++.+.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~   42 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANV   42 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            468999987 9999999999988999 999999887765443

>PRK08643 acetoin reductase; Validated

Probab=95.59  E-value=0.1  Score=45.63  Aligned_cols=78  Identities=17%  Similarity=0.212  Sum_probs=50.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce-E--eCCCCCCchhHHHHHHhhh--CC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVKGIT--HG  220 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g  220 (335)
                      ++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+.    +.+... .  .|-.+  +....+.+.+..  .+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            568899987 9999999999998999 9999998877654432    223221 1  23332  122333333221  13


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                       ++|++|.+.|.
T Consensus        79 -~id~vi~~ag~   89 (256)
T PRK08643         79 -DLNVVVNNAGV   89 (256)
T ss_pred             -CCCEEEECCCC
Confidence             68999998864

>PRK12828 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.095  Score=45.10  Aligned_cols=80  Identities=19%  Similarity=0.158  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHhcCCceE-eCCCCCCchhHHHHHHhhhC-CCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKAFGMTDF-INPDDEPNKSISELVKGITH-GMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~lga~~v-~~~~~~~~~~~~~~i~~~~~-g~g  222 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.++++.++...    ++..+...+ .|-.+  ..+....+++... -.+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence            4689999987 9999999999988899 89999987765332    222333221 22222  1222222222211 116


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|+|+++.+.
T Consensus        83 ~d~vi~~ag~   92 (239)
T PRK12828         83 LDALVNIAGA   92 (239)
T ss_pred             cCEEEECCcc
Confidence            8999988763

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.57  E-value=0.098  Score=47.63  Aligned_cols=95  Identities=20%  Similarity=0.169  Sum_probs=60.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      +|||+|+ |-+|..++..+...|. +|.+++++.++...+...+...+. |..+   .   ..+.+...  ++|+||+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~---~~l~~al~--g~d~Vi~~~   72 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---P---ETLPPSFK--GVTAIIDAS   72 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---H---HHHHHHHC--CCCEEEECC
Confidence            6899997 9999999999988999 999999887766555555654332 2222   2   22333333  589999986


Q ss_pred             CChH------------HHHHHHHhhccC-CeEEEEEccC
Q 019822          231 GVPS------------LLSEALETTKVG-KGKVIVIGVG  256 (335)
Q Consensus       231 g~~~------------~~~~~~~~l~~~-~G~~v~~g~~  256 (335)
                      +...            ....+++..... -.+++.++..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence            5320            112344544443 0378887764

>PLN02476 O-methyltransferase

Probab=95.55  E-value=0.12  Score=45.91  Aligned_cols=108  Identities=15%  Similarity=0.243  Sum_probs=69.3

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HhcCCceEeCCCCCCchhHHHHHHhh
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ....+..+.++||=+|.+ +|..++.+|+.++. .+|+.++.+++..+.+    ++.|..+-+.-..   .+..+.+.++
T Consensus       111 ~~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~l  186 (278)
T PLN02476        111 AMLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKSM  186 (278)
T ss_pred             HHHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHH
Confidence            344566778999999974 37777788887642 2799999999887766    4456432122111   3344444443


Q ss_pred             h-C--CCCccEEE-EcCC--ChHHHHHHHHhhccCCeEEEEEcc
Q 019822          218 T-H--GMGVDYCF-ECTG--VPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       218 ~-~--g~g~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      . .  ...||.|| |+--  ....++.+++.++++ |.++.=..
T Consensus       187 ~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DNv  229 (278)
T PLN02476        187 IQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDNV  229 (278)
T ss_pred             HhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEecC
Confidence            2 1  23799997 5543  245678889999997 88765443

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.55  E-value=0.2  Score=44.06  Aligned_cols=98  Identities=19%  Similarity=0.172  Sum_probs=68.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      +.......++++||=+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+...+.       .+.    .++...
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~----~~~~~~   87 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDV----RDWKPK   87 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cCh----hhCCCC
Confidence            34556677889999999875 77777888765 55 999999999988888776543221       111    122222


Q ss_pred             CCccEEEEcCC-----C-hHHHHHHHHhhccCCeEEEEE
Q 019822          221 MGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       221 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ..||+|+....     . ...+..+.+.|+++ |+++..
T Consensus        88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            37999986432     2 34677888999998 998765

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.098  Score=45.85  Aligned_cols=80  Identities=18%  Similarity=0.152  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCc-eE--eCCCCCCchhHHHHHHhhhC-CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMT-DF--INPDDEPNKSISELVKGITH-GM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lga~-~v--~~~~~~~~~~~~~~i~~~~~-g~  221 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+..++   .+.. ..  .|..+  +......+.+... ..
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAKFG   82 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhcC
Confidence            4678999987 9999999988888999 88888888876644333   3322 12  23322  1223333333221 12


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (258)
T PRK08628         83 RIDGLVNNAGV   93 (258)
T ss_pred             CCCEEEECCcc
Confidence            68999999873

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.54  E-value=0.13  Score=46.56  Aligned_cols=105  Identities=10%  Similarity=0.071  Sum_probs=69.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHH-HhcCCc--eEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKG-KAFGMT--DFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~-~G~~~V~~~~~~~~~~~~~-~~lga~--~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      ....+++|+|+|..|.+.+..+.. .+.++|.+..+++++.+.+ +++...  .+. ..     +..+.+.      ++|
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~-----~~~~av~------~aD  190 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PL-----DGEAIPE------AVD  190 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-EC-----CHHHHhh------cCC
Confidence            456789999999999998888864 6877999999998876654 444211  111 11     2222231      689


Q ss_pred             EEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHH
Q 019822          225 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL  268 (335)
Q Consensus       225 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~  268 (335)
                      +|+.|++++..+-..+  ++++ -++..+|.......+++..-+
T Consensus       191 iVitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~p~~~El~~~~~  231 (304)
T PRK07340        191 LVVTATTSRTPVYPEA--ARAG-RLVVAVGAFTPDMAELAPRTV  231 (304)
T ss_pred             EEEEccCCCCceeCcc--CCCC-CEEEecCCCCCCcccCCHHHH
Confidence            9999887653322223  6786 789999977655556664433

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.066  Score=46.78  Aligned_cols=79  Identities=23%  Similarity=0.352  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+    ++.+.. ..  .|-.+  ..+....+.+..  .
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~   82 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR--DAEVKALVEQTIAAY   82 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence            4689999987 9999999998888899 899999988765433    333422 12  23222  122222222221  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|++.|.
T Consensus        83 g-~id~li~~ag~   94 (253)
T PRK06172         83 G-RLDYAFNNAGI   94 (253)
T ss_pred             C-CCCEEEECCCC
Confidence            3 68999998774

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.53  E-value=0.078  Score=46.49  Aligned_cols=79  Identities=16%  Similarity=0.196  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+    ++.+... .  .|-.+  .....+.+.+..  .
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   82 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN--EDAVNAGIDKVAERF   82 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4688999987 9999999999999999 899999888665443    3334322 1  23222  122222222211  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|.+.|.
T Consensus        83 ~-~~d~vi~~ag~   94 (262)
T PRK13394         83 G-SVDILVSNAGI   94 (262)
T ss_pred             C-CCCEEEECCcc
Confidence            2 58999998864

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.51  E-value=0.43  Score=34.83  Aligned_cols=85  Identities=22%  Similarity=0.329  Sum_probs=55.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcC---CCEEEEE-cCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          153 SVAVLGLGTVGLGAVDGARMHG---AAKIIGI-DKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G---~~~V~~~-~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      +|.|+|+|.+|.+.+.-+...|   . +|+.+ ++++++.+.+ ++++.. +..      .+..+.++      ..|+||
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~-~~~------~~~~~~~~------~advvi   66 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQ-ATA------DDNEEAAQ------EADVVI   66 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTE-EES------EEHHHHHH------HTSEEE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccc-ccc------CChHHhhc------cCCEEE
Confidence            4778899999999999988888   6 88844 9999988876 556643 221      12233333      479999


Q ss_pred             EcCCChHHHHHHHHhh---ccCCeEEEEE
Q 019822          228 ECTGVPSLLSEALETT---KVGKGKVIVI  253 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l---~~~~G~~v~~  253 (335)
                      -|+... .+...++.+   .++ ..++.+
T Consensus        67 lav~p~-~~~~v~~~i~~~~~~-~~vis~   93 (96)
T PF03807_consen   67 LAVKPQ-QLPEVLSEIPHLLKG-KLVISI   93 (96)
T ss_dssp             E-S-GG-GHHHHHHHHHHHHTT-SEEEEE
T ss_pred             EEECHH-HHHHHHHHHhhccCC-CEEEEe
Confidence            999865 344444443   443 455554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.11  Score=45.22  Aligned_cols=80  Identities=18%  Similarity=0.190  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc--CCc-eEe--CCCCCCchhHHHHHHhhh-CCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF--GMT-DFI--NPDDEPNKSISELVKGIT-HGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l--ga~-~v~--~~~~~~~~~~~~~i~~~~-~g~  221 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.. .++  +.. .++  |-.+  .....+.+.+.. .-.
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS--AEAVEALVDFVAARWG   80 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcC
Confidence            4678999987 9999999998888899 999999887765443 222  221 222  3222  122222222221 112


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|+++.+.+.
T Consensus        81 ~id~vi~~ag~   91 (252)
T PRK06138         81 RLDVLVNNAGF   91 (252)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.51  E-value=0.14  Score=45.73  Aligned_cols=81  Identities=21%  Similarity=0.225  Sum_probs=58.0

Q ss_pred             HhcC-CCCCCEEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCC
Q 019822          144 KEAK-VEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       144 ~~~~-~~~~~~VlI~G~g~-vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      +..+ .-.|++|+|+|.|. +|..++.++...|+ +|+++.+..                      .++.+.+      +
T Consensus       151 ~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~------~  201 (283)
T PRK14192        151 KAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV------K  201 (283)
T ss_pred             HHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh------c
Confidence            3444 35788999999976 99999999999999 888887421                      1121112      2


Q ss_pred             CccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          222 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       222 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ++|+||+++|.+..+.  .+.+.++ ..+++++..
T Consensus       202 ~aDIvI~AtG~~~~v~--~~~lk~g-avViDvg~n  233 (283)
T PRK14192        202 QADIIVGAVGKPELIK--KDWIKQG-AVVVDAGFH  233 (283)
T ss_pred             cCCEEEEccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence            6899999998775433  3558886 888888754

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.51  E-value=0.12  Score=48.43  Aligned_cols=35  Identities=20%  Similarity=0.224  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      .+.+|+|+|+|++|..++..+...|.+++..++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56789999999999999999999999999999976

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.079  Score=46.36  Aligned_cols=80  Identities=20%  Similarity=0.150  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-h---cCCc---eEeCCCCCCchhHHHHHHhhh--
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A---FGMT---DFINPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~---lga~---~v~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .+++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+. +   .+..   ...|-.+  ...+...+.+..  
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   79 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALER   79 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHH
Confidence            35688999987 9999999999999999 9999999887665442 2   2321   1223322  123333333321  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -+ ++|++|.+.|.
T Consensus        80 ~g-~~d~vi~~ag~   92 (258)
T PRK07890         80 FG-RVDALVNNAFR   92 (258)
T ss_pred             cC-CccEEEECCcc
Confidence            12 68999988763

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.50  E-value=0.13  Score=44.31  Aligned_cols=80  Identities=20%  Similarity=0.251  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      ++.++||+|+ |.+|..+++.+...|. +|+++++++++.+.+    ++.+... .  .|-.+  +..+...+.+... -
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            3568999987 9999999999988999 899999988765443    3334322 1  23332  1223333333211 1


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      ..+|.++.+.+.
T Consensus        81 ~~id~vi~~ag~   92 (246)
T PRK05653         81 GALDILVNNAGI   92 (246)
T ss_pred             CCCCEEEECCCc
Confidence            258999998764

>PLN02823 spermine synthase

Probab=95.50  E-value=0.12  Score=47.35  Aligned_cols=100  Identities=12%  Similarity=0.053  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-c-eEeC-CCC-CCchhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-T-DFIN-PDD-EPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga-~-~v~~-~~~-~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      ..++|||+|+|. |..+..+++..+..+|++++.+++-.+.++++-. . ..++ .+- .-..|-...+++ . .+.+|+
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~-~~~yDv  179 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-R-DEKFDV  179 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-C-CCCccE
Confidence            457899998764 6667778887776699999999998888876421 0 0110 000 000223334433 2 347999


Q ss_pred             EE-EcCC-----------ChHHHH-HHHHhhccCCeEEEEE
Q 019822          226 CF-ECTG-----------VPSLLS-EALETTKVGKGKVIVI  253 (335)
Q Consensus       226 vi-d~~g-----------~~~~~~-~~~~~l~~~~G~~v~~  253 (335)
                      || |...           +.+.++ .+.+.|+++ |.++.-
T Consensus       180 Ii~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q  219 (336)
T PLN02823        180 IIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ  219 (336)
T ss_pred             EEecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence            97 6432           122455 678899998 988754

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=95.50  E-value=0.044  Score=46.59  Aligned_cols=106  Identities=21%  Similarity=0.258  Sum_probs=67.8

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      .+....++||-+|.+ +|+.++.+|+.+.- .+|+.++.+++..+.++    +.|...-+....   .+..+.+.++...
T Consensus        41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~---gda~~~l~~l~~~  116 (205)
T PF01596_consen   41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE---GDALEVLPELAND  116 (205)
T ss_dssp             HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE---S-HHHHHHHHHHT
T ss_pred             HHhcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE---eccHhhHHHHHhc
Confidence            445567899999975 48889999987742 39999999998877764    445322112121   3344445544322


Q ss_pred             ---CCccEEE-EcCCC--hHHHHHHHHhhccCCeEEEEEccC
Q 019822          221 ---MGVDYCF-ECTGV--PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       221 ---~g~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                         ..||+|| |+--.  ...++.+++.++++ |.++.=...
T Consensus       117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~l  157 (205)
T PF01596_consen  117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNVL  157 (205)
T ss_dssp             TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETTT
T ss_pred             cCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcccc
Confidence               2699997 76532  24567888999996 776665443

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.48  E-value=0.066  Score=47.07  Aligned_cols=78  Identities=15%  Similarity=0.190  Sum_probs=49.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhC-CCC
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-GMG  222 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~-g~g  222 (335)
                      .++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+    +..+... +  .|..+  ...+...+++... -.+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD--AEACERLIEAAVARFGG   78 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence            57999987 9999999999989999 999999987665433    2233321 1  23222  1223333333211 126


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|.+.|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            8999998763

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.48  E-value=0.4  Score=40.83  Aligned_cols=99  Identities=18%  Similarity=0.228  Sum_probs=63.2

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce--EeCCCCCCchhHHHHHHh
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG  216 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i~~  216 (335)
                      .......++.+||-+|+|. |..+..+++.. . +|++++.+++..+.++    +++...  +...+      ...   .
T Consensus        71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~~---~  138 (212)
T PRK00312         71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD------GWK---G  138 (212)
T ss_pred             HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC------ccc---C
Confidence            4567788999999999864 55666666654 3 8999999987766553    344322  22111      111   1


Q ss_pred             hhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822          217 ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      +.....||+|+...........+.+.|+++ |+++..-
T Consensus       139 ~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~  175 (212)
T PRK00312        139 WPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPV  175 (212)
T ss_pred             CCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence            112237999986544444567888999997 9887653

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.47  E-value=0.14  Score=45.58  Aligned_cols=81  Identities=17%  Similarity=0.242  Sum_probs=49.5

Q ss_pred             CCCCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHH-HhcCCceE--eCCCCCCchhHHHHHHhhh
Q 019822          148 VEKGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNP---WKKEKG-KAFGMTDF--INPDDEPNKSISELVKGIT  218 (335)
Q Consensus       148 ~~~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~---~~~~~~-~~lga~~v--~~~~~~~~~~~~~~i~~~~  218 (335)
                      .-.++++||+|+   +++|.+.++.+...|+ +|+.+.+++   ++.+.+ ++++....  .|-.+  ..+..+.+++..
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~   83 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD--EASIDAVFETLE   83 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC--HHHHHHHHHHHH
Confidence            335688999986   5899999999988999 898887764   233333 34453222  23222  233333333322


Q ss_pred             C-CCCccEEEEcCC
Q 019822          219 H-GMGVDYCFECTG  231 (335)
Q Consensus       219 ~-g~g~d~vid~~g  231 (335)
                      . -.++|+++++.|
T Consensus        84 ~~~g~iD~lv~nAG   97 (272)
T PRK08159         84 KKWGKLDFVVHAIG   97 (272)
T ss_pred             HhcCCCcEEEECCc
Confidence            1 126899998876

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.47  E-value=0.09  Score=46.06  Aligned_cols=79  Identities=22%  Similarity=0.318  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHhcCCce---EeCCCCCCchhHHHHHHhhh--CCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTD---FINPDDEPNKSISELVKGIT--HGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~  221 (335)
                      +++++||+|+ +++|.++++.+...|+ +|+.+++++..  .+.+++.+...   ..|-.+  ..+..+.+++..  -+ 
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g-   82 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMG-   82 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcC-
Confidence            5789999987 9999999999999999 89888765422  22334445321   133332  233333333321  13 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|+++++.|.
T Consensus        83 ~iD~lv~~ag~   93 (251)
T PRK12481         83 HIDILINNAGI   93 (251)
T ss_pred             CCCEEEECCCc
Confidence            68999998773

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.45  E-value=0.11  Score=45.66  Aligned_cols=80  Identities=19%  Similarity=0.180  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc-----CCc-eE--eCCCCCCchhHHHHHHhhhC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF-----GMT-DF--INPDDEPNKSISELVKGITH  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l-----ga~-~v--~~~~~~~~~~~~~~i~~~~~  219 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ +++     +.. ..  .|-.+  ..+....+.+...
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   82 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE   82 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 999999888766544 222     211 11  23322  1223333332211


Q ss_pred             -CCCccEEEEcCCC
Q 019822          220 -GMGVDYCFECTGV  232 (335)
Q Consensus       220 -g~g~d~vid~~g~  232 (335)
                       -.++|++|++.|.
T Consensus        83 ~~g~id~li~~ag~   96 (260)
T PRK07063         83 AFGPLDVLVNNAGI   96 (260)
T ss_pred             HhCCCcEEEECCCc
Confidence             1268999998873

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.12  Score=44.78  Aligned_cols=75  Identities=11%  Similarity=0.053  Sum_probs=48.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ce--EeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TD--FINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga-~~--v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      .++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.+.+. ..  ..|-.+  ..+..+.+++. .. ..|.++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~-~~-~~d~~i   76 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQL-PF-IPELWI   76 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhc-cc-CCCEEE
Confidence            57899987 9999998888888999 99999999888777654331 11  223332  13344444433 22 457766


Q ss_pred             EcCC
Q 019822          228 ECTG  231 (335)
Q Consensus       228 d~~g  231 (335)
                      .+.|
T Consensus        77 ~~ag   80 (240)
T PRK06101         77 FNAG   80 (240)
T ss_pred             EcCc
Confidence            5554

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.44  E-value=0.12  Score=47.20  Aligned_cols=79  Identities=23%  Similarity=0.254  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC---Cc-eE--eCCCCCCchhHHHHHHhhh-CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG---MT-DF--INPDDEPNKSISELVKGIT-HG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg---a~-~v--~~~~~~~~~~~~~~i~~~~-~g  220 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++.   .. ..  .|-.+  .....+.+.++. .+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   81 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence            4678999987 9999999998888898 999999988776544 3332   11 11  23332  122222233321 12


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                      .++|++|++.|
T Consensus        82 ~~iD~li~nAg   92 (322)
T PRK07453         82 KPLDALVCNAA   92 (322)
T ss_pred             CCccEEEECCc
Confidence            26999999877

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.44  E-value=0.1  Score=45.84  Aligned_cols=79  Identities=18%  Similarity=0.212  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCce---EeCCCCCCchhHHHHHHhhhC-CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMTD---FINPDDEPNKSISELVKGITH-GM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lga~~---v~~~~~~~~~~~~~~i~~~~~-g~  221 (335)
                      +++++||+|+ |.+|.++++.+...|+ +|+.+++++...+..++   .+.+.   ..|..+  ..+..+.+++... -.
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence            4678999987 9999999999988999 99999987543333332   33321   223332  1223333333221 12


Q ss_pred             CccEEEEcCC
Q 019822          222 GVDYCFECTG  231 (335)
Q Consensus       222 g~d~vid~~g  231 (335)
                      ++|+++++.|
T Consensus        84 ~id~lv~nAg   93 (260)
T PRK12823         84 RIDVLINNVG   93 (260)
T ss_pred             CCeEEEECCc
Confidence            6999999886

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.43  E-value=0.1  Score=45.55  Aligned_cols=36  Identities=28%  Similarity=0.405  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .+.+|+|+|+|++|..+++.+...|.++++.+|.+.
T Consensus        23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            347899999999999999999999998999888554

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK09186 flagellin modification protein A; Provisional

Probab=95.43  E-value=0.13  Score=44.84  Aligned_cols=79  Identities=18%  Similarity=0.241  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCc---e-EeCCCCCCchhHHHHHHhhhC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GMT---D-FINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----ga~---~-v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      +++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ +++    +..   . ..|-.+  +..+.+.+.+...
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~   79 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence            4688999987 9999999999999999 999999888776543 222    221   1 223332  2333333333211


Q ss_pred             -CCCccEEEEcCC
Q 019822          220 -GMGVDYCFECTG  231 (335)
Q Consensus       220 -g~g~d~vid~~g  231 (335)
                       -.++|++|++.+
T Consensus        80 ~~~~id~vi~~A~   92 (256)
T PRK09186         80 KYGKIDGAVNCAY   92 (256)
T ss_pred             HcCCccEEEECCc
Confidence             115899998874

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.42  E-value=0.12  Score=47.49  Aligned_cols=36  Identities=19%  Similarity=0.385  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+|+|+|+|++|..++..+...|..++..+|.+.
T Consensus        23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            457899999999999999999999999999999763

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.076  Score=47.30  Aligned_cols=78  Identities=19%  Similarity=0.238  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+    ++.+... .  .|-.+  ..+..+.+.+..  .
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   81 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL   81 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence            5678999986 9999999999999999 899999887665543    2234321 1  23222  122333232221  1


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      + .+|++|++.|
T Consensus        82 g-~id~li~nAg   92 (275)
T PRK05876         82 G-HVDVVFSNAG   92 (275)
T ss_pred             C-CCCEEEECCC
Confidence            2 6899999887

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.40  E-value=0.12  Score=44.85  Aligned_cols=78  Identities=24%  Similarity=0.297  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCc-e--EeCCCCCCchhHHH---HHHhhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K---AFGMT-D--FINPDDEPNKSISE---LVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~---~lga~-~--v~~~~~~~~~~~~~---~i~~~~  218 (335)
                      .++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +   +.+.. .  ..|-.+  ......   .+.+..
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   81 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF   81 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence            4678999987 9999999999888999 999999887655433 2   22211 1  233332  122222   222222


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                       + ++|++|.+.|.
T Consensus        82 -~-~id~vi~~ag~   93 (250)
T PRK07774         82 -G-GIDYLVNNAAI   93 (250)
T ss_pred             -C-CCCEEEECCCC
Confidence             2 68999998873

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.38  E-value=0.26  Score=45.82  Aligned_cols=95  Identities=16%  Similarity=0.253  Sum_probs=62.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEc--CChhhHH-HHHhcCCceEeCCCCCCchhHHHHHHh---------
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMH--GAAKIIGID--KNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKG---------  216 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~--G~~~V~~~~--~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~---------  216 (335)
                      ++|.|+|+ |++|..+++..+..  .+ +|++++  ++.+++. .+++++...++-.++    .....+++         
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~----~~~~~l~~~l~~~~~~v   76 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADE----EAAKELKEALAAAGIEV   76 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHhhccCCceE
Confidence            57889996 99999999988765  46 777775  3334443 347788777654442    12222322         


Q ss_pred             ---------hhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEE
Q 019822          217 ---------ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIV  252 (335)
Q Consensus       217 ---------~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~  252 (335)
                               +.....+|+|+.++++...+...+.++..+ -++.+
T Consensus        77 ~~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL  120 (385)
T PRK05447         77 LAGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL  120 (385)
T ss_pred             EEChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence                     222346899999998876778888888875 45444

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.15  Score=45.23  Aligned_cols=40  Identities=25%  Similarity=0.357  Sum_probs=34.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK  190 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~  190 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~   46 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAA   46 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence            4679999997 9999999999999999 99999988766543

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.13  Score=44.96  Aligned_cols=79  Identities=16%  Similarity=0.109  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DF--INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      +++++||+|+ |.+|.++++.+...|+ +|+.++++.++.+.+.    +.+.. ..  .|..+  ..+....+++... -
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   83 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERH   83 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4578999987 9999999999999999 9999998877655432    22321 11  23322  1223222332211 1


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                      ..+|+++++.+
T Consensus        84 ~~id~li~~ag   94 (252)
T PRK07035         84 GRLDILVNNAA   94 (252)
T ss_pred             CCCCEEEECCC
Confidence            15899998876

>PRK08589 short chain dehydrogenase; Validated

Probab=95.37  E-value=0.12  Score=45.81  Aligned_cols=79  Identities=19%  Similarity=0.312  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCc-e--EeCCCCCCchhHHHHHHhhh--CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMT-D--FINPDDEPNKSISELVKGIT--HG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lga~-~--v~~~~~~~~~~~~~~i~~~~--~g  220 (335)
                      +++++||+|+ +++|.+.++.+...|+ +|+.++++++..+.+++   .+.. .  ..|-.+  .......+.+..  .+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence            4679999987 9999999998888999 99999988332232332   2321 1  233332  122333333322  13


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                       ++|++|++.|.
T Consensus        82 -~id~li~~Ag~   92 (272)
T PRK08589         82 -RVDVLFNNAGV   92 (272)
T ss_pred             -CcCEEEECCCC
Confidence             68999998763

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.37  E-value=0.13  Score=45.40  Aligned_cols=79  Identities=14%  Similarity=0.254  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceE--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDF--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+   +++|.+.++.+...|+ +|+.+.+++...+.++    +++....  .|-.+  ..+..+.+.+..  
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   81 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS--DDEINQVFADLGKH   81 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC--HHHHHHHHHHHHHH
Confidence            5678999983   5899999999888999 8888766543333332    2342222  23222  233333333322  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|+++++.|.
T Consensus        82 ~g-~iD~lVnnAG~   94 (261)
T PRK08690         82 WD-GLDGLVHSIGF   94 (261)
T ss_pred             hC-CCcEEEECCcc
Confidence            13 69999998763

>PRK06849 hypothetical protein; Provisional

Probab=95.36  E-value=1  Score=42.24  Aligned_cols=96  Identities=14%  Similarity=0.007  Sum_probs=59.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      ...+|||+|+ .+.|+..+..++..|. +|++++.++.......+. .....++....++..+.+.+.++....++|+++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vI   81 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLI   81 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence            4578999998 6789999999999999 999999876544322111 111223221112245777777776666899999


Q ss_pred             EcCCChHHHHHHHHhhccC
Q 019822          228 ECTGVPSLLSEALETTKVG  246 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~  246 (335)
                      -+......+....+.+...
T Consensus        82 P~~e~~~~~a~~~~~l~~~  100 (389)
T PRK06849         82 PTCEEVFYLSHAKEELSAY  100 (389)
T ss_pred             ECChHHHhHHhhhhhhcCC
Confidence            7765332222333445443

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.35  E-value=0.16  Score=44.50  Aligned_cols=80  Identities=19%  Similarity=0.314  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh-CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT-HG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~-~g  220 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+    ++.|.. ..  .|-.+  .....+.+.+.. .-
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   85 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            5689999987 9999999998888899 999999887765443    222321 12  23332  122333333221 11


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      ..+|++|++.|.
T Consensus        86 ~~~d~li~~ag~   97 (255)
T PRK07523         86 GPIDILVNNAGM   97 (255)
T ss_pred             CCCCEEEECCCC
Confidence            268999998874

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=95.34  E-value=0.14  Score=42.68  Aligned_cols=92  Identities=22%  Similarity=0.259  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce--EeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD--FINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~--v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      ++++||-+|+|+ |..++.+++.....+|++++.+++..+.+    ++.+...  ++..+      ..    ++.....+
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d------~~----~~~~~~~f  110 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGR------AE----DFQHEEQF  110 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecc------hh----hccccCCc
Confidence            478999999764 66666666655434899999998866655    3345332  22222      21    11223379


Q ss_pred             cEEEEcC-CC-hHHHHHHHHhhccCCeEEEEE
Q 019822          224 DYCFECT-GV-PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       224 d~vid~~-g~-~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      |+|+... .. +..++.+.+.|+++ |+++..
T Consensus       111 D~I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~  141 (181)
T TIGR00138       111 DVITSRALASLNVLLELTLNLLKVG-GYFLAY  141 (181)
T ss_pred             cEEEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence            9998532 22 34567778889997 998876

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.33  E-value=0.13  Score=45.59  Aligned_cols=79  Identities=24%  Similarity=0.198  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K---AFGMT-DF--INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~---~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      +++++||+|+ |.+|.+++..+...|+ +|+.+++++++.+.+ +   +.+.. ..  .|..+  .......+.+... -
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~   85 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD--KESLEQARQQILEDF   85 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4688999987 9999999999989999 999999887665443 2   22322 11  23322  1223333332211 1


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                      .++|++|++.|
T Consensus        86 g~id~li~~ag   96 (278)
T PRK08277         86 GPCDILINGAG   96 (278)
T ss_pred             CCCCEEEECCC
Confidence            26899999877

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.13  Score=45.61  Aligned_cols=78  Identities=19%  Similarity=0.198  Sum_probs=50.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCC--c-eE--eCCCCCCchhHHHHHHhhh-C
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM--T-DF--INPDDEPNKSISELVKGIT-H  219 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga--~-~v--~~~~~~~~~~~~~~i~~~~-~  219 (335)
                      ++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+.    ..+.  . ..  .|..+  +.++.. +.+.. .
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~   78 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE   78 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence            567999987 9999999998888899 9999998877665442    2221  1 12  23333  233333 44332 1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      ..++|+++.+.|.
T Consensus        79 ~~~id~vv~~ag~   91 (280)
T PRK06914         79 IGRIDLLVNNAGY   91 (280)
T ss_pred             cCCeeEEEECCcc
Confidence            1268999998764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.32  E-value=0.16  Score=44.98  Aligned_cols=78  Identities=17%  Similarity=0.248  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceE--eCCCCCCchhHHHHHHhhhC-
Q 019822          150 KGSSVAVLGLG---TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDF--INPDDEPNKSISELVKGITH-  219 (335)
Q Consensus       150 ~~~~VlI~G~g---~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~v--~~~~~~~~~~~~~~i~~~~~-  219 (335)
                      +++++||+|++   ++|.++++.+...|+ +|+.+++++...+.+++    .+....  .|-.+  +.+..+.+.+... 
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~   81 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKV   81 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhh
Confidence            56889999873   799999998888999 89888876321222222    232222  23322  2333333333322 


Q ss_pred             -CCCccEEEEcCC
Q 019822          220 -GMGVDYCFECTG  231 (335)
Q Consensus       220 -g~g~d~vid~~g  231 (335)
                       + .+|++|++.|
T Consensus        82 ~g-~iD~linnAg   93 (262)
T PRK07984         82 WP-KFDGFVHSIG   93 (262)
T ss_pred             cC-CCCEEEECCc
Confidence             3 5899999887

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.31  E-value=0.15  Score=44.39  Aligned_cols=79  Identities=25%  Similarity=0.206  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eEe--CCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DFI--NPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.    +.+.. .++  |..+  .....+.++++.. -
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD--RDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 9999999999988999 9999998877655432    22321 222  2222  1223333333221 1


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                      .++|++|.+.+
T Consensus        79 ~~~d~vi~~ag   89 (250)
T TIGR03206        79 GPVDVLVNNAG   89 (250)
T ss_pred             CCCCEEEECCC
Confidence            26899999886

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06484 short chain dehydrogenase; Validated

Probab=95.31  E-value=0.072  Score=52.04  Aligned_cols=79  Identities=22%  Similarity=0.338  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---EeCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      +++++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+ ++++...   ..|-.+  +....+.+.+..  .+ +
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g-~   79 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFG-R   79 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhC-C
Confidence            5688999987 9999999999999999 999999988876654 4455322   233332  133333333322  13 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|++.|.
T Consensus        80 iD~li~nag~   89 (520)
T PRK06484         80 IDVLVNNAGV   89 (520)
T ss_pred             CCEEEECCCc
Confidence            9999998764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.31  E-value=0.17  Score=44.16  Aligned_cols=79  Identities=20%  Similarity=0.292  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      +++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+    ++.+.. ..  .|-.+  +.+....+++..  -
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   86 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH   86 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            5789999987 9999999998888899 999999987765443    233421 12  23332  133333333321  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + .+|.+|.+.|.
T Consensus        87 ~-~id~vi~~ag~   98 (256)
T PRK06124         87 G-RLDILVNNVGA   98 (256)
T ss_pred             C-CCCEEEECCCC
Confidence            3 68999988774

>PRK08328 hypothetical protein; Provisional

Probab=95.29  E-value=0.15  Score=44.23  Aligned_cols=36  Identities=31%  Similarity=0.427  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .+.+|+|+|+|++|..++..+...|.++++.+|.+.
T Consensus        26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            457899999999999999999999998999998554

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.29  E-value=0.15  Score=46.29  Aligned_cols=40  Identities=30%  Similarity=0.346  Sum_probs=34.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK  190 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~  190 (335)
                      .+++++|+|+ +++|.+++..+...|+ +|+.+++++++.+.
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~   53 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEA   53 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence            4688999987 9999999998888999 99999998876554

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.17  Score=44.94  Aligned_cols=78  Identities=15%  Similarity=0.201  Sum_probs=50.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCc-eE--eCCCCCCchhHHHHHHhhh-CCCCccE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMT-DF--INPDDEPNKSISELVKGIT-HGMGVDY  225 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~-~v--~~~~~~~~~~~~~~i~~~~-~g~g~d~  225 (335)
                      +++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+++ .+.. .+  .|..+  .....+.+.+.. ...++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            57999987 9999999998888899 99999998887766543 2221 11  23332  122333333321 1126899


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      +|++.|.
T Consensus        80 vi~~ag~   86 (276)
T PRK06482         80 VVSNAGY   86 (276)
T ss_pred             EEECCCC
Confidence            9998763

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.28  E-value=0.35  Score=36.65  Aligned_cols=92  Identities=17%  Similarity=0.192  Sum_probs=60.1

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP  233 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~  233 (335)
                      |+|+|.|.+|..+++.++..+. +|++++.++++.+.+++.|.. ++..+.   .+ ...+++. +=..++.++-+++..
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~---~~-~~~l~~a-~i~~a~~vv~~~~~d   73 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA---TD-PEVLERA-GIEKADAVVILTDDD   73 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T---TS-HHHHHHT-TGGCESEEEEESSSH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc---hh-hhHHhhc-CccccCEEEEccCCH
Confidence            5788999999999999999776 999999999999999888854 443332   11 2234433 223788888887765


Q ss_pred             HHHH---HHHHhhccCCeEEEEE
Q 019822          234 SLLS---EALETTKVGKGKVIVI  253 (335)
Q Consensus       234 ~~~~---~~~~~l~~~~G~~v~~  253 (335)
                      ..-.   ..++.+.+. .+++..
T Consensus        74 ~~n~~~~~~~r~~~~~-~~ii~~   95 (116)
T PF02254_consen   74 EENLLIALLARELNPD-IRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHHTTT-SEEEEE
T ss_pred             HHHHHHHHHHHHHCCC-CeEEEE
Confidence            3222   233334454 455544

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.28  E-value=0.14  Score=44.21  Aligned_cols=74  Identities=16%  Similarity=0.227  Sum_probs=54.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      .++|+|+|.+|..+++.+...|. +|++++.++++.+.. . +++. +++..+.   . -.+.+++. +=..+|+++-++
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~---t-~~~~L~~a-gi~~aD~vva~t   74 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA---T-DEDVLEEA-GIDDADAVVAAT   74 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC---C-CHHHHHhc-CCCcCCEEEEee
Confidence            57889999999999999999999 999999999987773 3 3554 3443332   1 12334443 334799999988


Q ss_pred             CCh
Q 019822          231 GVP  233 (335)
Q Consensus       231 g~~  233 (335)
                      +..
T Consensus        75 ~~d   77 (225)
T COG0569          75 GND   77 (225)
T ss_pred             CCC
Confidence            875

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.27  E-value=0.1  Score=42.33  Aligned_cols=81  Identities=21%  Similarity=0.227  Sum_probs=48.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC--hhhHHHH----HhcCCce-EeCCCCCCchhHHHHHHhhh-CCCC
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN--PWKKEKG----KAFGMTD-FINPDDEPNKSISELVKGIT-HGMG  222 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~--~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~i~~~~-~g~g  222 (335)
                      +++||+|+ +++|.+.++.+...|..+|+.+.++  .++.+.+    +..+... ++..+-....+....+++.. ....
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            46899987 9999998888887777688888888  4443332    3344321 22211111233344444332 2237


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|.+.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            8999998875

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.27  E-value=0.1  Score=52.64  Aligned_cols=76  Identities=25%  Similarity=0.358  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHhcCCceEeCCCCCCch
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW---------------------KKEKGKAFGMTDFINPDDEPNK  208 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~  208 (335)
                      .+++|+|+|+|+.|+.++..++..|+ +|+++++.+.                     ..+.++++|.+...+..-  ..
T Consensus       326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v--~~  402 (654)
T PRK12769        326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEV--GK  402 (654)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEe--CC
Confidence            47899999999999999999999999 8999986532                     345566777654333221  00


Q ss_pred             hHHHHHHhhhCCCCccEEEEcCCC
Q 019822          209 SISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       209 ~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      +.  .+.++.  .++|.||.++|.
T Consensus       403 ~i--~~~~~~--~~~DavilAtGa  422 (654)
T PRK12769        403 DI--SLESLL--EDYDAVFVGVGT  422 (654)
T ss_pred             cC--CHHHHH--hcCCEEEEeCCC
Confidence            10  111111  269999998885

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=95.24  E-value=0.11  Score=45.64  Aligned_cols=97  Identities=14%  Similarity=0.125  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC----Cc------eEeCCCCCCchhHHHHHHhhh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG----MT------DFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg----a~------~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ...++|||+|+|. |..+-.++++-..++|.+++.+++-.+.++++-    ..      .++.      .|-...+++..
T Consensus        75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~------~Dg~~~l~~~~  147 (246)
T PF01564_consen   75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII------GDGRKFLKETQ  147 (246)
T ss_dssp             SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE------STHHHHHHTSS
T ss_pred             CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE------hhhHHHHHhcc
Confidence            3688999998654 556677777776669999999998888886642    11      1221      33455566644


Q ss_pred             CCCCccEEE-EcCC---------ChHHHHHHHHhhccCCeEEEEEc
Q 019822          219 HGMGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       219 ~g~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      .. .+|+|+ |...         +.+.++.+.+.|+++ |.++.-.
T Consensus       148 ~~-~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~  191 (246)
T PF01564_consen  148 EE-KYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA  191 (246)
T ss_dssp             ST--EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CC-cccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence            33 799997 6554         235778899999998 9888764

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.22  E-value=0.17  Score=41.77  Aligned_cols=33  Identities=18%  Similarity=0.214  Sum_probs=29.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      +|+|+|+|++|...++.+...|..++..+|.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999999999999998899998765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08317 hypothetical protein; Provisional

Probab=95.22  E-value=0.24  Score=42.61  Aligned_cols=103  Identities=24%  Similarity=0.376  Sum_probs=68.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc----CCc-eEeCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAF----GMT-DFINPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~i~  215 (335)
                      +.+...+.++++||.+|+|. |..+..+++..+ ..++++++.+++..+.+++.    +.. .....+.   ..+     
T Consensus        11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~-----   81 (241)
T PRK08317         11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL-----   81 (241)
T ss_pred             HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence            34567788999999999976 888889988774 23999999999888887654    111 1111111   000     


Q ss_pred             hhhCCCCccEEEEcC-----C-ChHHHHHHHHhhccCCeEEEEEcc
Q 019822          216 GITHGMGVDYCFECT-----G-VPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       216 ~~~~g~g~d~vid~~-----g-~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .+..+ .+|+|+...     . -...+..+.+.|+++ |.++....
T Consensus        82 ~~~~~-~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  125 (241)
T PRK08317         82 PFPDG-SFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT  125 (241)
T ss_pred             CCCCC-CceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence            12223 789888532     1 234678999999998 99887653

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.074  Score=47.00  Aligned_cols=76  Identities=20%  Similarity=0.333  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhh--CCCCccEE
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGIT--HGMGVDYC  226 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~g~d~v  226 (335)
                      +++++|+|+ |.+|..+++.+...|+ +|++++++.++.+...  +... ..|..+  +.++...+++..  .+ .+|++
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g-~~d~l   77 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAG-RIDVL   77 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCC-CCCEE
Confidence            468999987 9999999999888999 9999998876554321  2221 223332  233444443321  13 68999


Q ss_pred             EEcCCC
Q 019822          227 FECTGV  232 (335)
Q Consensus       227 id~~g~  232 (335)
                      |++.|.
T Consensus        78 i~~ag~   83 (270)
T PRK06179         78 VNNAGV   83 (270)
T ss_pred             EECCCC
Confidence            998874

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.20  E-value=0.1  Score=44.83  Aligned_cols=75  Identities=20%  Similarity=0.202  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+.++.++     .+... ...|-.+  .......+.+.....+.|++|
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi   73 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD--IEQTAATLAQINEIHPVDAIV   73 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEE
Confidence            3578999987 9999999999999999 99999987654     11111 1223322  133334444443333689999


Q ss_pred             EcCCC
Q 019822          228 ECTGV  232 (335)
Q Consensus       228 d~~g~  232 (335)
                      .+.|.
T Consensus        74 ~~ag~   78 (234)
T PRK07577         74 NNVGI   78 (234)
T ss_pred             ECCCC
Confidence            98774

>PRK08263 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.18  Score=44.67  Aligned_cols=79  Identities=11%  Similarity=0.103  Sum_probs=50.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCC-ceEe--CCCCCCchhHHHHHHhhhC-CCCcc
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGM-TDFI--NPDDEPNKSISELVKGITH-GMGVD  224 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga-~~v~--~~~~~~~~~~~~~i~~~~~-g~g~d  224 (335)
                      ++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+.+ ++. ...+  |..+  +..+...+.+... -.++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD--RAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence            468999987 9999999998888898 99999998887765533 221 1122  2222  1223232332211 12689


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      .+|.+.|.
T Consensus        80 ~vi~~ag~   87 (275)
T PRK08263         80 IVVNNAGY   87 (275)
T ss_pred             EEEECCCC
Confidence            99998874

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=95.19  E-value=0.23  Score=44.69  Aligned_cols=43  Identities=21%  Similarity=0.191  Sum_probs=37.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  196 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga  196 (335)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~   43 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA   43 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence            37788999999988888888898 99999999999888877765

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.18  E-value=0.17  Score=40.26  Aligned_cols=32  Identities=31%  Similarity=0.378  Sum_probs=28.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      +|+|+|+|++|...+..+...|.+++..++.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            48899999999999999999999889999865

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.18  E-value=0.14  Score=44.81  Aligned_cols=36  Identities=28%  Similarity=0.394  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+|+|+|+|++|..++..+...|..++..+|.+.
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            457899999999999999999999998998887543

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.17  E-value=0.4  Score=41.07  Aligned_cols=103  Identities=17%  Similarity=0.165  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEe------CC-CCCCchhHHHHHHhhh--
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFI------NP-DDEPNKSISELVKGIT--  218 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~------~~-~~~~~~~~~~~i~~~~--  218 (335)
                      .++.+||+.|+|. |.-++-||. .|+ +|++++.|+.-.+.+ ++.+.....      .. ....-.-....+.++.  
T Consensus        33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            5778999999874 777777775 799 999999999888775 333321000      00 0000000011111111  


Q ss_pred             CCCCccEEEEcCCC--------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          219 HGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       219 ~g~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ....+|.|+|+..-        +..+..+.++|+++ |+++.+..
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~  153 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL  153 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence            01268999996531        23567889999997 98776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.16  Score=45.88  Aligned_cols=40  Identities=20%  Similarity=0.229  Sum_probs=33.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK  190 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~  190 (335)
                      .++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~   55 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKA   55 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence            5688999987 9999999998888899 99999988776543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.17  E-value=0.11  Score=46.31  Aligned_cols=80  Identities=19%  Similarity=0.186  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc------eEeCCCCCCchhHHHHHHh-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT------DFINPDDEPNKSISELVKG-  216 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~------~v~~~~~~~~~~~~~~i~~-  216 (335)
                      -.++.+||+|+ .++|.+.+..+...|+ +|+.+.+++++.+..++    .+..      .+.|...  +.+..+.+.. 
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~   82 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFA   82 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHH
Confidence            46788999986 8999999999999999 99999999988766432    2221      2233332  1233222222 


Q ss_pred             --hhCCCCccEEEEcCCC
Q 019822          217 --ITHGMGVDYCFECTGV  232 (335)
Q Consensus       217 --~~~g~g~d~vid~~g~  232 (335)
                        ...| ++|+++++.|.
T Consensus        83 ~~~~~G-kidiLvnnag~   99 (270)
T KOG0725|consen   83 VEKFFG-KIDILVNNAGA   99 (270)
T ss_pred             HHHhCC-CCCEEEEcCCc
Confidence              2234 79999987764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.17  E-value=0.21  Score=43.62  Aligned_cols=80  Identities=19%  Similarity=0.246  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K---AFGMT-DF--INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~---~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+.+ .   ..+.. ..  .|-.+  ...+...+.+... .
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   84 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH--KQEVEAAIEHIEKDI   84 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC--HHHHHHHHHHHHHhc
Confidence            4678999987 9999999999988999 999999887765443 2   22321 12  23222  1223333322211 1


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|+++++.|.
T Consensus        85 ~~id~vi~~ag~   96 (254)
T PRK08085         85 GPIDVLINNAGI   96 (254)
T ss_pred             CCCCEEEECCCc
Confidence            268999998874

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.19  Score=43.64  Aligned_cols=78  Identities=17%  Similarity=0.239  Sum_probs=49.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----c--CCc-eE--eCCCCCCchhHHHHHHhhhC-
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----F--GMT-DF--INPDDEPNKSISELVKGITH-  219 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----l--ga~-~v--~~~~~~~~~~~~~~i~~~~~-  219 (335)
                      ++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+    .  +.. ++  .|..+  .....+.++++.. 
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   78 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE   78 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            467999987 9999998888888898 99999998877655421    1  211 12  23333  2333333333221 


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      -.++|++|.+.|
T Consensus        79 ~~~id~vi~~ag   90 (248)
T PRK08251         79 LGGLDRVIVNAG   90 (248)
T ss_pred             cCCCCEEEECCC
Confidence            126899999876

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.16  E-value=0.22  Score=44.78  Aligned_cols=94  Identities=17%  Similarity=0.209  Sum_probs=65.7

Q ss_pred             ccccchhhhhHHHHHhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCc
Q 019822          130 FLSCGFTTGYGAAWKEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  207 (335)
Q Consensus       130 ~l~~~~~ta~~~l~~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~  207 (335)
                      .+||....... +.+..++ -.|++|.|+|. +.+|.-.+.++...|+ +|++..+...                     
T Consensus       138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~---------------------  194 (301)
T PRK14194        138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST---------------------  194 (301)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence            34554333333 3455554 57999999997 6999999999999999 9999864321                     


Q ss_pred             hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                       +..+.+      +..|+|+-++|.+..+...+  ++++ ..++++|..
T Consensus       195 -~l~e~~------~~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin  233 (301)
T PRK14194        195 -DAKALC------RQADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN  233 (301)
T ss_pred             -CHHHHH------hcCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence             111112      15799999999887666555  7886 888998854

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.17  Score=44.32  Aligned_cols=79  Identities=16%  Similarity=0.158  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC--ceE--eCCCCCCchhHHHHHHhhhC-CCCc
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM--TDF--INPDDEPNKSISELVKGITH-GMGV  223 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga--~~v--~~~~~~~~~~~~~~i~~~~~-g~g~  223 (335)
                      ++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+ +++..  -..  .|-.+  .......+.+... -.++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence            468999987 9999999988888899 999999988776554 33321  112  23332  1222233332211 1258


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |+++.+.|.
T Consensus        79 d~vi~~ag~   87 (257)
T PRK07074         79 DVLVANAGA   87 (257)
T ss_pred             CEEEECCCC
Confidence            999998864

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.16  E-value=0.019  Score=46.17  Aligned_cols=99  Identities=16%  Similarity=0.153  Sum_probs=58.2

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCC--C-chhHHHHHHhhhCCCCccEEEEcC
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE--P-NKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~--~-~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      |+|+|+|++|...+..++..|. +|..+.+++ +.+.+++.|........+.  . .......   ......+|+||-|+
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~viv~v   75 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SADAGPYDLVIVAV   75 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GHHHSTESEEEE-S
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hhccCCCcEEEEEe
Confidence            6899999999998888887999 999999877 7776766553211111000  0 0000000   01123799999998


Q ss_pred             CChH---HHHHHHHhhccCCeEEEEEccCCC
Q 019822          231 GVPS---LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       231 g~~~---~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      -...   .++.+...+.+. ..++.+.+..+
T Consensus        76 Ka~~~~~~l~~l~~~~~~~-t~iv~~qNG~g  105 (151)
T PF02558_consen   76 KAYQLEQALQSLKPYLDPN-TTIVSLQNGMG  105 (151)
T ss_dssp             SGGGHHHHHHHHCTGEETT-EEEEEESSSSS
T ss_pred             cccchHHHHHHHhhccCCC-cEEEEEeCCCC
Confidence            6642   333444444554 57777765543

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.15  E-value=0.16  Score=43.38  Aligned_cols=35  Identities=20%  Similarity=0.296  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      ...+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45789999999999999999999999889999976

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.14  E-value=0.19  Score=44.99  Aligned_cols=67  Identities=18%  Similarity=0.293  Sum_probs=49.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      +|.|+|.|.+|...+..++..|. +|+++++++++.+.+.+.|.....  .    .+. +.+      ++.|+||-|+..
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~--~----~~~-~~~------~~aDlVilavp~   67 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA--S----TDL-SLL------KDCDLVILALPI   67 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc--c----CCH-hHh------cCCCEEEEcCCH
Confidence            58899999999998888888898 999999999988888777742111  1    111 111      267999998875


Q ss_pred             h
Q 019822          233 P  233 (335)
Q Consensus       233 ~  233 (335)
                      .
T Consensus        68 ~   68 (279)
T PRK07417         68 G   68 (279)
T ss_pred             H
Confidence            4

>PLN02244 tocopherol O-methyltransferase

Probab=95.14  E-value=0.076  Score=48.98  Aligned_cols=95  Identities=20%  Similarity=0.328  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc-e--EeCCCCCCchhHHHHHHhhhCCC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT-D--FINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~-~--v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .++++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++.    +.. .  .+..+.   .+    + .+.. .
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~----~-~~~~-~  185 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LN----Q-PFED-G  185 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---cc----C-CCCC-C
Confidence            6788999999864 6677888887788 999999999877766442    321 1  111111   00    0 1122 3


Q ss_pred             CccEEEEcCCC------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          222 GVDYCFECTGV------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       222 g~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .||+|+.....      ...+.++.+.|+++ |+++....
T Consensus       186 ~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~  224 (340)
T PLN02244        186 QFDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW  224 (340)
T ss_pred             CccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            79999863321      23678889999998 99988654

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.14  E-value=0.19  Score=43.98  Aligned_cols=79  Identities=16%  Similarity=0.168  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HH-H---HHhcCCc-eE--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KE-K---GKAFGMT-DF--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~-~~-~---~~~lga~-~v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ +++|.++++.+...|+ +|+.++++.++ .+ .   +++.+.. ..  .|-.+  ..+..+.+.+..  
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~   83 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS--KADLRAAVARTEAE   83 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999986 9999999999999999 99998876532 22 2   2333422 12  23222  123333333321  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -+ ++|++|++.|.
T Consensus        84 ~g-~id~li~~ag~   96 (254)
T PRK06114         84 LG-ALTLAVNAAGI   96 (254)
T ss_pred             cC-CCCEEEECCCC
Confidence            13 68999998874

>PRK08223 hypothetical protein; Validated

Probab=95.14  E-value=0.11  Score=46.36  Aligned_cols=36  Identities=31%  Similarity=0.251  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+|+|+|+|++|..+++.+..+|..++..+|.+.
T Consensus        26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            467899999999999999999999999999988554

>PRK07574 formate dehydrogenase; Provisional

Probab=95.13  E-value=0.26  Score=46.16  Aligned_cols=45  Identities=22%  Similarity=0.449  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG  195 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg  195 (335)
                      .+++|.|+|.|.+|...++.++.+|. +|++.+++....+..+++|
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g  235 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG  235 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence            56789999999999999999999999 9999998753333333333

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.10  E-value=0.16  Score=44.79  Aligned_cols=78  Identities=15%  Similarity=0.242  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHH-Hhc-CCc-e--EeCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNP---WKKEKG-KAF-GMT-D--FINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~---~~~~~~-~~l-ga~-~--v~~~~~~~~~~~~~~i~~~~  218 (335)
                      .++++||+|+   +++|.++++.+...|+ +|+.++++.   ++.+.+ +++ +.. .  ..|-.+  .....+.+++..
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~   82 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK   82 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence            4688999986   5999999999988999 898886543   333333 333 211 1  123332  233333333332


Q ss_pred             C--CCCccEEEEcCC
Q 019822          219 H--GMGVDYCFECTG  231 (335)
Q Consensus       219 ~--g~g~d~vid~~g  231 (335)
                      .  | ++|+++++.|
T Consensus        83 ~~~g-~ld~lv~nag   96 (257)
T PRK08594         83 EEVG-VIHGVAHCIA   96 (257)
T ss_pred             HhCC-CccEEEECcc
Confidence            2  3 6999998876

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.10  E-value=0.21  Score=44.03  Aligned_cols=94  Identities=20%  Similarity=0.203  Sum_probs=61.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc---eEeCCCCCCchhHHHHHHhhhCCC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT---DFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.    |..   .++..+      .. .+.....+ 
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d------~~-~l~~~~~~-  111 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA------AQ-DIAQHLET-  111 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC------HH-HHhhhcCC-
Confidence            4567899888874 7777788774 77 999999999988877543    321   122111      11 12222233 


Q ss_pred             CccEEEEcC-----CC-hHHHHHHHHhhccCCeEEEEEc
Q 019822          222 GVDYCFECT-----GV-PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       222 g~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      .+|+|+...     .. ...+..+.+.|+++ |+++.+-
T Consensus       112 ~fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  149 (255)
T PRK11036        112 PVDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF  149 (255)
T ss_pred             CCCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence            799998532     22 24578899999998 9987653

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.07  E-value=0.2  Score=44.61  Aligned_cols=78  Identities=21%  Similarity=0.243  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhhCCCCc
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      ++.+||+|+|++|.+++..+. .|+ +|+.+++++++.+.+    ++.+.. ..  .|-.+  .....+.+.+...-.++
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV   77 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence            457888898999999998885 798 999999987765443    222322 12  23332  12333333332111269


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|++.|.
T Consensus        78 d~li~nAG~   86 (275)
T PRK06940         78 TGLVHTAGV   86 (275)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.07  E-value=0.1  Score=45.24  Aligned_cols=80  Identities=18%  Similarity=0.133  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eEe--CCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DFI--NPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      .++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+    ++.+.. .++  |-.+  .......+++... -
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   81 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD--RAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            4578999987 9999999998888899 999999986654432    223321 122  2222  1223333322211 1


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      ..+|.+|.+.+.
T Consensus        82 ~~~d~vi~~ag~   93 (251)
T PRK12826         82 GRLDILVANAGI   93 (251)
T ss_pred             CCCCEEEECCCC
Confidence            268999988754

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.06  E-value=0.13  Score=45.06  Aligned_cols=79  Identities=18%  Similarity=0.272  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc-eE--eCCCCCCchhHHHHHHhhhC-CCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT-DF--INPDDEPNKSISELVKGITH-GMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g~g~  223 (335)
                      .++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+. +++.. ..  .|-.+  .......+++... ...+
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR--QDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            3578999987 9999999999988999 9999999888766543 33321 11  22222  1233333332211 1268


Q ss_pred             cEEEEcCC
Q 019822          224 DYCFECTG  231 (335)
Q Consensus       224 d~vid~~g  231 (335)
                      |+++.+.+
T Consensus        82 d~li~~ag   89 (257)
T PRK07067         82 DILFNNAA   89 (257)
T ss_pred             CEEEECCC
Confidence            99998876

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=95.06  E-value=0.23  Score=44.41  Aligned_cols=87  Identities=18%  Similarity=0.305  Sum_probs=55.8

Q ss_pred             EEEEEcCCHHHHHH-HHHHHHcCCCEEEEEc-CChhh--HHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          153 SVAVLGLGTVGLGA-VDGARMHGAAKIIGID-KNPWK--KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       153 ~VlI~G~g~vG~~a-i~la~~~G~~~V~~~~-~~~~~--~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      +|.|+|+|.+|... ..+.+.-+. ++.+++ .++++  ++.++++|....++       ++...+    ....+|+|++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll----~~~dIDaV~i   70 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLL----ANPDIDIVFD   70 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHh----cCCCCCEEEE
Confidence            68899999999855 556555566 665544 44443  45677888654331       122222    2237999999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEE
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIV  252 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~  252 (335)
                      +++.....+.+..++..+ -++++
T Consensus        71 aTp~~~H~e~a~~al~aG-k~VId   93 (285)
T TIGR03215        71 ATSAKAHARHARLLAELG-KIVID   93 (285)
T ss_pred             CCCcHHHHHHHHHHHHcC-CEEEE
Confidence            999887777777777774 34443

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=95.05  E-value=0.32  Score=43.46  Aligned_cols=89  Identities=24%  Similarity=0.204  Sum_probs=62.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK-KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~-~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      +|-.+|.|.+|.-.++=+...|+ .|.+.++++++ .+++++.|+...-        +..+.++      ..|+||-+++
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~--------s~~eaa~------~aDvVitmv~   66 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAA--------SPAEAAA------EADVVITMLP   66 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccC--------CHHHHHH------hCCEEEEecC
Confidence            57788999999998888888999 99999999999 8888888875321        1112222      5788888877


Q ss_pred             ChHHHHHHH-------HhhccCCeEEEEEccCC
Q 019822          232 VPSLLSEAL-------ETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       232 ~~~~~~~~~-------~~l~~~~G~~v~~g~~~  257 (335)
                      ..+.++..+       +.++++ ..+|+++..+
T Consensus        67 ~~~~V~~V~~g~~g~~~~~~~G-~i~IDmSTis   98 (286)
T COG2084          67 DDAAVRAVLFGENGLLEGLKPG-AIVIDMSTIS   98 (286)
T ss_pred             CHHHHHHHHhCccchhhcCCCC-CEEEECCCCC
Confidence            765555444       223455 6666666554

>PLN02253 xanthoxin dehydrogenase

Probab=95.05  E-value=0.15  Score=45.23  Aligned_cols=79  Identities=22%  Similarity=0.210  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC--c-eE--eCCCCCCchhHHHHHHhhh--CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM--T-DF--INPDDEPNKSISELVKGIT--HG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga--~-~v--~~~~~~~~~~~~~~i~~~~--~g  220 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ ++++.  . ..  .|-.+  .....+.+.+..  .+
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG   93 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            4678999987 9999999998888999 999999877655433 33321  1 11  23332  122322222221  13


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                       ++|++|++.|.
T Consensus        94 -~id~li~~Ag~  104 (280)
T PLN02253         94 -TLDIMVNNAGL  104 (280)
T ss_pred             -CCCEEEECCCc
Confidence             68999998763

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.04  E-value=0.16  Score=43.86  Aligned_cols=82  Identities=11%  Similarity=0.204  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-EeCCCCCCchhHHHHHHhhhC-CCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-FINPDDEPNKSISELVKGITH-GMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~i~~~~~-g~g  222 (335)
                      .+.++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+    +..+... ++..+-.+.....+.+++... -.+
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999987 9999999998888999 999999987765443    2223211 222221111233333333211 126


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            8999998764

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.04  E-value=0.096  Score=45.79  Aligned_cols=109  Identities=18%  Similarity=0.216  Sum_probs=67.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HhcCCce-EeCCCCCCchhHH-HHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKG----KAFGMTD-FINPDDEPNKSIS-ELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~~~-~~i  214 (335)
                      +....++.||++|+=-|.|+ |.+...|++..|. .+|+..+..+++.+.+    +.+|... |--.+    .|.. +..
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~----~Dv~~~g~  106 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH----RDVCEEGF  106 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE----S-GGCG--
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe----cceecccc
Confidence            45678999999999887653 7788888887763 4999999999887766    4456432 21111    1111 111


Q ss_pred             HhhhCCCCccEEE-EcCCChHHHHHHHHhh-ccCCeEEEEEccCC
Q 019822          215 KGITHGMGVDYCF-ECTGVPSLLSEALETT-KVGKGKVIVIGVGV  257 (335)
Q Consensus       215 ~~~~~g~g~d~vi-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~  257 (335)
                      .+-.+ ..+|.|| |--.-...+..+.+.| +++ |+++.+...-
T Consensus       107 ~~~~~-~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP~i  149 (247)
T PF08704_consen  107 DEELE-SDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSPCI  149 (247)
T ss_dssp             STT-T-TSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEESSH
T ss_pred             ccccc-CcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCCH
Confidence            11111 3689887 5544445789999999 887 9999996554

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.04  E-value=0.11  Score=45.69  Aligned_cols=80  Identities=21%  Similarity=0.279  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCc-eE--eCCCCCCchhHHHHHHhhhC-CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMT-DF--INPDDEPNKSISELVKGITH-GM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lga~-~v--~~~~~~~~~~~~~~i~~~~~-g~  221 (335)
                      .++++||+|+ |.+|..+++.+...|+ +|+.++++++..+.+++   .+.. ..  .|-.+  ..+....+.+... -.
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            4688999987 9999999999988999 89999988754433332   2322 11  23222  1222222222211 12


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      .+|++|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (263)
T PRK08226         82 RIDILVNNAGV   92 (263)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.02  E-value=0.23  Score=40.22  Aligned_cols=85  Identities=14%  Similarity=0.084  Sum_probs=53.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC------ceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM------TDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga------~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      +|.|+|+|..|.+++.++...|. +|....++++..+.+++-+.      ...+..+-.-..+..+.+      ++.|++
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~------~~ad~I   73 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL------EDADII   73 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH------TT-SEE
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh------CcccEE
Confidence            57899999999999999999998 99999999888777754221      011111000002233333      268999


Q ss_pred             EEcCCChHHHHHHHHhhcc
Q 019822          227 FECTGVPSLLSEALETTKV  245 (335)
Q Consensus       227 id~~g~~~~~~~~~~~l~~  245 (335)
                      +-++.+. ..+..++.+.+
T Consensus        74 iiavPs~-~~~~~~~~l~~   91 (157)
T PF01210_consen   74 IIAVPSQ-AHREVLEQLAP   91 (157)
T ss_dssp             EE-S-GG-GHHHHHHHHTT
T ss_pred             EecccHH-HHHHHHHHHhh
Confidence            9988876 45666665554

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.02  E-value=0.2  Score=47.21  Aligned_cols=82  Identities=21%  Similarity=0.271  Sum_probs=51.5

Q ss_pred             cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-------HHHhc-CCceE-eCCCCCCchhHHHHHH
Q 019822          146 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE-------KGKAF-GMTDF-INPDDEPNKSISELVK  215 (335)
Q Consensus       146 ~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~-------~~~~l-ga~~v-~~~~~~~~~~~~~~i~  215 (335)
                      .+-..+.+|||+|+ |.+|..++..+...|+ +|++++++..+.+       ..... +...+ .|..+  +..+...++
T Consensus        55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~  131 (390)
T PLN02657         55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLF  131 (390)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHH
Confidence            34456789999987 9999999999988999 9999998765431       11112 22222 23333  122333333


Q ss_pred             hhhCCCCccEEEEcCCC
Q 019822          216 GITHGMGVDYCFECTGV  232 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~  232 (335)
                      ..  +.++|+||+|.+.
T Consensus       132 ~~--~~~~D~Vi~~aa~  146 (390)
T PLN02657        132 SE--GDPVDVVVSCLAS  146 (390)
T ss_pred             Hh--CCCCcEEEECCcc
Confidence            22  1169999998763

>PRK07985 oxidoreductase; Provisional

Probab=95.01  E-value=0.48  Score=42.63  Aligned_cols=80  Identities=19%  Similarity=0.058  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP--WKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~--~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~  218 (335)
                      -.++++||+|+ |.+|.++++.+...|+ +|+.+.++.  ++.+.+    ++.+...   ..|-.+  .....+.+++..
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~  123 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAH  123 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHH
Confidence            35678999987 9999999999999999 888876542  233222    2333221   123332  122333333322


Q ss_pred             C-CCCccEEEEcCC
Q 019822          219 H-GMGVDYCFECTG  231 (335)
Q Consensus       219 ~-g~g~d~vid~~g  231 (335)
                      . ..++|+++++.|
T Consensus       124 ~~~g~id~lv~~Ag  137 (294)
T PRK07985        124 KALGGLDIMALVAG  137 (294)
T ss_pred             HHhCCCCEEEECCC
Confidence            1 126899998776

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=95.01  E-value=0.28  Score=44.37  Aligned_cols=43  Identities=21%  Similarity=0.302  Sum_probs=37.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  196 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga  196 (335)
                      +|.|+|.|.+|...+.-+...|. +|++.++++++.+.+++.|.
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~   44 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT   44 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence            57889999999988888888898 99999999999888877664

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=95.00  E-value=0.64  Score=41.19  Aligned_cols=102  Identities=12%  Similarity=0.158  Sum_probs=63.0

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHH----HhcCCceEeCCCCCCchhHHHHHHhhhC
Q 019822          145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      ....+++++||=+|+|+ |..++.++..++ ...|++++.++++.+.+    +.+|...+.-..    .+.. .+.. ..
T Consensus        66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~----~D~~-~~~~-~~  138 (264)
T TIGR00446        66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTN----FDGR-VFGA-AV  138 (264)
T ss_pred             HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEec----CCHH-Hhhh-hc
Confidence            34678899999888764 555666666653 23899999999988766    445654321111    1111 1111 12


Q ss_pred             CCCccEEE-E--cCCC-------------------------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          220 GMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       220 g~g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      + .||.|+ |  |+|.                         ...+..+++.++++ |+++....
T Consensus       139 ~-~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstc  200 (264)
T TIGR00446       139 P-KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTC  200 (264)
T ss_pred             c-CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence            2 599887 5  4443                         12667788899997 98875543

>PLN03075 nicotianamine synthase; Provisional

Probab=95.00  E-value=0.18  Score=45.23  Aligned_cols=99  Identities=12%  Similarity=0.129  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcC-C----ceEeCCCCCCchhHHHHHHhhhCCCC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFG-M----TDFINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lg-a----~~v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      .++++|+-+|+|+.++.++.+++... -.+++.++.+++..+.+++.- .    ..-+....   .+..+.   ...-.+
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~---~~~l~~  195 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDV---TESLKE  195 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhc---ccccCC
Confidence            37789999999998998888886553 238999999999888876543 1    11111111   112111   111237


Q ss_pred             ccEEEEcC-------CChHHHHHHHHhhccCCeEEEEEc
Q 019822          223 VDYCFECT-------GVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       223 ~d~vid~~-------g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ||+||-.+       .....++.+.+.|+++ |.++.-.
T Consensus       196 FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        196 YDVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             cCEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            99998544       2235778999999997 8777664

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=94.99  E-value=0.29  Score=45.51  Aligned_cols=61  Identities=26%  Similarity=0.309  Sum_probs=45.1

Q ss_pred             CCcccccccccchhhhhHHHHHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKV-EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~-~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      ....+|....+.+++- .+ .+..+. -.+.+|.|-|.|.+|+.+++.+...|+ +|++++.++.
T Consensus       180 ~~r~~aTg~Gv~~~~~-~a-~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g  241 (411)
T COG0334         180 LGRSEATGYGVFYAIR-EA-LKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG  241 (411)
T ss_pred             CCCCcccceehHHHHH-HH-HHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence            3445566565444433 33 344444 589999999999999999999999999 9998887766

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=94.99  E-value=0.091  Score=37.17  Aligned_cols=62  Identities=16%  Similarity=0.228  Sum_probs=43.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      +|+|+|+|.+|.-++..++.+|. +|+.+.+++.-.            ..-+   .+....+++....+++++.+++.
T Consensus         1 ~vvViGgG~ig~E~A~~l~~~g~-~vtli~~~~~~~------------~~~~---~~~~~~~~~~l~~~gV~v~~~~~   62 (80)
T PF00070_consen    1 RVVVIGGGFIGIELAEALAELGK-EVTLIERSDRLL------------PGFD---PDAAKILEEYLRKRGVEVHTNTK   62 (80)
T ss_dssp             EEEEESSSHHHHHHHHHHHHTTS-EEEEEESSSSSS------------TTSS---HHHHHHHHHHHHHTTEEEEESEE
T ss_pred             CEEEECcCHHHHHHHHHHHHhCc-EEEEEeccchhh------------hhcC---HHHHHHHHHHHHHCCCEEEeCCE
Confidence            58899999999999999999998 999998754311            1111   44555555555445788777653

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.98  E-value=0.16  Score=42.95  Aligned_cols=35  Identities=14%  Similarity=0.357  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      ...+|+|+|+|++|.-++..+...|.+++..+|.+
T Consensus        20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            45789999999999999999999999899999855

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK09242 tropinone reductase; Provisional

Probab=94.97  E-value=0.23  Score=43.47  Aligned_cols=79  Identities=11%  Similarity=0.191  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc-----CCc-eE--eCCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF-----GMT-DF--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l-----ga~-~v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      .++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+. ++     +.. ..  .|-.+  ..+....+.+.. 
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~   84 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence            4789999987 9999999999999999 9999998887765442 21     211 11  23322  122222222221 


Q ss_pred             -CCCCccEEEEcCCC
Q 019822          219 -HGMGVDYCFECTGV  232 (335)
Q Consensus       219 -~g~g~d~vid~~g~  232 (335)
                       -+ ++|+++.+.|.
T Consensus        85 ~~g-~id~li~~ag~   98 (257)
T PRK09242         85 HWD-GLHILVNNAGG   98 (257)
T ss_pred             HcC-CCCEEEECCCC
Confidence             13 69999998874

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.97  E-value=0.42  Score=41.03  Aligned_cols=78  Identities=26%  Similarity=0.265  Sum_probs=48.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh----------hhHHHHHhcCCceEeCCCCCCchhHHHHHHhhh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP----------WKKEKGKAFGMTDFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~----------~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      -.+.+|+|.|.|.+|+.+++++...|.+.|.+.+.+.          +..+..++.+....++..+     .. .-.++.
T Consensus        21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~~~~~~-----~~-~~~~l~   94 (217)
T cd05211          21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQD-----YF-PGEAIL   94 (217)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccccCccc-----cc-Ccccce
Confidence            4678999999999999999999999985566666655          5555555544221111100     00 001111


Q ss_pred             CCCCccEEEEcCCCh
Q 019822          219 HGMGVDYCFECTGVP  233 (335)
Q Consensus       219 ~g~g~d~vid~~g~~  233 (335)
                       ...+|+++-|....
T Consensus        95 -~~~~DVlipaA~~~  108 (217)
T cd05211          95 -GLDVDIFAPCALGN  108 (217)
T ss_pred             -eccccEEeeccccC
Confidence             22688998887655

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK07856 short chain dehydrogenase; Provisional

Probab=94.97  E-value=0.17  Score=44.24  Aligned_cols=77  Identities=18%  Similarity=0.173  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhhC-CCCccEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDYC  226 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~-g~g~d~v  226 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+.+++++++.  ........ ..|..+  ..+..+.+.+... ...+|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            4789999987 9999999999988999 999999876551  11111111 223332  1223333332211 1268999


Q ss_pred             EEcCC
Q 019822          227 FECTG  231 (335)
Q Consensus       227 id~~g  231 (335)
                      |.+.|
T Consensus        80 i~~ag   84 (252)
T PRK07856         80 VNNAG   84 (252)
T ss_pred             EECCC
Confidence            99876

>PRK06398 aldose dehydrogenase; Validated

Probab=94.97  E-value=0.03  Score=49.29  Aligned_cols=76  Identities=13%  Similarity=0.149  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhC-CCCccEEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH-GMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~-g~g~d~vi  227 (335)
                      .++++||+|+ +.+|.+++..+...|+ +|+.+++++++...+.    ....|-.+  +....+.+.+... -.++|++|
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~----~~~~D~~~--~~~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYNDVD----YFKVDVSN--KEQVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccCceE----EEEccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999987 9999999999999999 9999988765432110    01123332  1233333333221 12689999


Q ss_pred             EcCCC
Q 019822          228 ECTGV  232 (335)
Q Consensus       228 d~~g~  232 (335)
                      ++.|.
T Consensus        78 ~~Ag~   82 (258)
T PRK06398         78 NNAGI   82 (258)
T ss_pred             ECCCC
Confidence            98763

>PRK08264 short chain dehydrogenase; Validated

Probab=94.96  E-value=0.18  Score=43.44  Aligned_cols=75  Identities=23%  Similarity=0.307  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eE--eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-DF--INPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      .++++||+|+ |.+|..+++.+...|+.+|++++++.++.+.   .+.. .+  .|-.+  .....+.+++.   ..+|+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~--~~~~~~~~~~~---~~id~   76 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD--PASVAAAAEAA---SDVTI   76 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC--HHHHHHHHHhc---CCCCE
Confidence            4678999986 9999999999988998689999987766543   2211 12  23322  12222222221   25899


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      +|.+.|.
T Consensus        77 vi~~ag~   83 (238)
T PRK08264         77 LVNNAGI   83 (238)
T ss_pred             EEECCCc
Confidence            9998876

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.96  E-value=0.18  Score=44.02  Aligned_cols=77  Identities=17%  Similarity=0.223  Sum_probs=50.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCce-E--eCCCCCCchhHHHHHHhhhC-CCCccEE
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTD-F--INPDDEPNKSISELVKGITH-GMGVDYC  226 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~-v--~~~~~~~~~~~~~~i~~~~~-g~g~d~v  226 (335)
                      +++|+|+ |.+|.+++..+...|+ +|+++++++++.+.+.+ ++... .  .|-.+  .....+.+.+... ..++|.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence            6899987 9999999999998999 99999999887766533 34321 1  23222  1223333333211 1269999


Q ss_pred             EEcCCC
Q 019822          227 FECTGV  232 (335)
Q Consensus       227 id~~g~  232 (335)
                      +.+.|.
T Consensus        79 i~~ag~   84 (248)
T PRK10538         79 VNNAGL   84 (248)
T ss_pred             EECCCc
Confidence            988764

>PLN00016 RNA-binding protein; Provisional

Probab=94.95  E-value=0.24  Score=46.34  Aligned_cols=97  Identities=13%  Similarity=0.168  Sum_probs=60.7

Q ss_pred             CCCEEEEE----cC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-----------HHhcCCceEeCCCCCCchhHHHH
Q 019822          150 KGSSVAVL----GL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-----------GKAFGMTDFINPDDEPNKSISEL  213 (335)
Q Consensus       150 ~~~~VlI~----G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~-----------~~~lga~~v~~~~~~~~~~~~~~  213 (335)
                      ...+|||+    |+ |-+|..++..+...|. +|+++++++.....           +...+...+.       .+... 
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d-  121 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD-  121 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH-
Confidence            34689999    97 9999999999988899 99999987654221           1223333322       12222 


Q ss_pred             HHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccC-CeEEEEEcc
Q 019822          214 VKGITHGMGVDYCFECTGVP-SLLSEALETTKVG-KGKVIVIGV  255 (335)
Q Consensus       214 i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~-~G~~v~~g~  255 (335)
                      +.+.....++|+||++.+.. .....+++.+... -.++|.++.
T Consensus       122 ~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS  165 (378)
T PLN00016        122 VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS  165 (378)
T ss_pred             HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            33333345899999987643 2234555655433 137887664

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.94  E-value=0.13  Score=45.08  Aligned_cols=79  Identities=20%  Similarity=0.196  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      .++++||+|+ |.+|.+.++.+...|+ +|++++++ ++.+.+    .+.+.. ..  .|-.+  .......+.+... .
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~   89 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEEF   89 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            5789999987 9999999999999999 89988877 333222    233322 12  23332  1223223332211 1


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|++|++.|.
T Consensus        90 g~id~li~~ag~  101 (258)
T PRK06935         90 GKIDILVNNAGT  101 (258)
T ss_pred             CCCCEEEECCCC
Confidence            168999998763

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.92  E-value=0.31  Score=43.42  Aligned_cols=93  Identities=22%  Similarity=0.214  Sum_probs=63.7

Q ss_pred             cccchhhhhHHHHHhcCC-CCCCEEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCch
Q 019822          131 LSCGFTTGYGAAWKEAKV-EKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK  208 (335)
Q Consensus       131 l~~~~~ta~~~l~~~~~~-~~~~~VlI~G~g-~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~  208 (335)
                      +||....... +.+..++ -.|++|+|+|.| .+|.-++.++...|+ +|.+....                   +   .
T Consensus       137 ~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~-------------------t---~  192 (285)
T PRK14191        137 VPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHIL-------------------T---K  192 (285)
T ss_pred             CCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCC-------------------c---H
Confidence            4544433333 4455554 469999999975 999999999999999 88877421                   1   2


Q ss_pred             hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       209 ~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ++.+.++      .+|+|+-++|.+..+.  -+.++++ ..++.+|..
T Consensus       193 ~l~~~~~------~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~  231 (285)
T PRK14191        193 DLSFYTQ------NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN  231 (285)
T ss_pred             HHHHHHH------hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence            2222222      5899999999885543  4466886 899999864

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.92  E-value=0.37  Score=43.37  Aligned_cols=43  Identities=26%  Similarity=0.329  Sum_probs=36.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  196 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga  196 (335)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus         4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~   46 (296)
T PRK11559          4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA   46 (296)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence            68899999999988888878898 99999999988887777664

>PRK06484 short chain dehydrogenase; Validated

Probab=94.92  E-value=0.19  Score=49.13  Aligned_cols=105  Identities=18%  Similarity=0.212  Sum_probs=67.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCce---EeCCCCCCchhHHHHHHhhhC-CCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTD---FINPDDEPNKSISELVKGITH-GMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~---v~~~~~~~~~~~~~~i~~~~~-g~g~  223 (335)
                      .++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++...   ..|-.+  ..+..+.+.+... -..+
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGRL  344 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            5688999987 9999999999999999 9999999888776654 344322   233332  1233333333221 1268


Q ss_pred             cEEEEcCCChH--------------------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          224 DYCFECTGVPS--------------------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       224 d~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      |++|++.|...                          ..+.++..+... |+++.++....
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~~  404 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIAS  404 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchhh
Confidence            99999877420                          123334455555 89988876543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.91  E-value=0.16  Score=44.80  Aligned_cols=80  Identities=21%  Similarity=0.293  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhCC-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITHG-  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~g-  220 (335)
                      .++++||+|+ +.+|.+++..+...|+ +|+.+++++++.+.+    ++.+... .  .|-.+  .......+.+.... 
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   85 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV   85 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence            5678999987 9999999988888999 899999888765443    2334321 1  23222  12222222222111 


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|++|++.|.
T Consensus        86 ~~id~li~~ag~   97 (265)
T PRK07097         86 GVIDILVNNAGI   97 (265)
T ss_pred             CCCCEEEECCCC
Confidence            268999998874

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=94.90  E-value=0.083  Score=46.52  Aligned_cols=73  Identities=11%  Similarity=0.028  Sum_probs=52.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      +|||+|+++-|..++..+...|. +|+++.+++...+.+.+.|...+....-    +- ..+.++....++|+|+|++-
T Consensus         2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~l----~~-~~l~~~l~~~~i~~VIDAtH   74 (256)
T TIGR00715         2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGAL----DP-QELREFLKRHSIDILVDATH   74 (256)
T ss_pred             eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECCC----CH-HHHHHHHHhcCCCEEEEcCC
Confidence            68999885559999988888898 9999999988887777776555542221    11 22444444558999999875

This enzyme was found to be a monomer by gel filtration.

>PLN02256 arogenate dehydrogenase

Probab=94.90  E-value=0.48  Score=42.95  Aligned_cols=97  Identities=12%  Similarity=0.203  Sum_probs=61.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      +.+...-....+|.|+|.|.+|...+..++..|. +|+++++++. .+.++++|...   ..+     ..+.+    . .
T Consensus        27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~~-----~~e~~----~-~   91 (304)
T PLN02256         27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FRD-----PDDFC----E-E   91 (304)
T ss_pred             HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eCC-----HHHHh----h-C
Confidence            4555666677789999999999999998888887 8999998764 35566677532   111     11111    1 1


Q ss_pred             CccEEEEcCCChHHHHHHHHh-----hccCCeEEEEEcc
Q 019822          222 GVDYCFECTGVPSLLSEALET-----TKVGKGKVIVIGV  255 (335)
Q Consensus       222 g~d~vid~~g~~~~~~~~~~~-----l~~~~G~~v~~g~  255 (335)
                      ..|+||-|+... .....++.     +.++ ..++.++.
T Consensus        92 ~aDvVilavp~~-~~~~vl~~l~~~~l~~~-~iviDv~S  128 (304)
T PLN02256         92 HPDVVLLCTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS  128 (304)
T ss_pred             CCCEEEEecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence            478888888754 33333333     3344 55666654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.90  E-value=0.16  Score=44.40  Aligned_cols=80  Identities=21%  Similarity=0.226  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCc-eE--eCCCCCCchhHHHHHHhhh-CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFGMT-DF--INPDDEPNKSISELVKGIT-HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~-~g~g  222 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+.+++++.  ..+.+++++.. ..  .|-.+  ..+....+.+.. ...+
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK--IDGIPALLERAVAEFGH   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHhCC
Confidence            4678999987 9999999999999999 8888875432  22333444422 11  22221  123333333321 1126


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|++.|.
T Consensus        86 ~D~li~~Ag~   95 (253)
T PRK08993         86 IDILVNNAGL   95 (253)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.89  E-value=0.11  Score=40.44  Aligned_cols=79  Identities=19%  Similarity=0.342  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGID-KNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~-~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      .-+|-|+|+|.+|..+...++..|. .|..+. ++.++.+.+.+ ++...+.+..            +..  +..|++|-
T Consensus        10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~------------~~~--~~aDlv~i   74 (127)
T PF10727_consen   10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLE------------EIL--RDADLVFI   74 (127)
T ss_dssp             --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TT------------GGG--CC-SEEEE
T ss_pred             ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCcccccccccccccccccccc------------ccc--ccCCEEEE
Confidence            4578999999999999999999999 887775 55556666544 3433333322            222  26899999


Q ss_pred             cCCChHHHHHHHHhhcc
Q 019822          229 CTGVPSLLSEALETTKV  245 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~  245 (335)
                      ++... .+..+++.|..
T Consensus        75 avpDd-aI~~va~~La~   90 (127)
T PF10727_consen   75 AVPDD-AIAEVAEQLAQ   90 (127)
T ss_dssp             -S-CC-HHHHHHHHHHC
T ss_pred             EechH-HHHHHHHHHHH
Confidence            99887 56777777764

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=94.89  E-value=0.45  Score=40.30  Aligned_cols=100  Identities=18%  Similarity=0.149  Sum_probs=64.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      ++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++    .+...+- ...   .+....+........+|.
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~---~d~~~~l~~~~~~~~~D~  114 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLC---GDAVEVLLDMFPDGSLDR  114 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEe---cCHHHHHHHHcCccccce
Confidence            667899999875 7788888877643489999999988887743    2322211 111   223223332222336898


Q ss_pred             EEEcCC--------------ChHHHHHHHHhhccCCeEEEEEcc
Q 019822          226 CFECTG--------------VPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       226 vid~~g--------------~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      |+-...              ....++.+.+.|+++ |+++....
T Consensus       115 V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~~  157 (202)
T PRK00121        115 IYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFATD  157 (202)
T ss_pred             EEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEcC
Confidence            875332              234678999999998 99987643

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.2  Score=45.41  Aligned_cols=34  Identities=21%  Similarity=0.267  Sum_probs=30.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+.++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence            4689999987 8999999999999999 99998876

>PRK06720 hypothetical protein; Provisional

Probab=94.86  E-value=0.25  Score=40.60  Aligned_cols=79  Identities=18%  Similarity=0.209  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      +++.++|+|+ +++|...+..+...|+ +|+.++++.+..+..    ++.+... .  .|..+  ...+.+.+.+..  -
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~v~~~~~~~   91 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK--QGDWQRVISITLNAF   91 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5678999987 8899999988888899 999999887655332    2234221 1  22222  122333222211  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      | ++|+++++.|.
T Consensus        92 G-~iDilVnnAG~  103 (169)
T PRK06720         92 S-RIDMLFQNAGL  103 (169)
T ss_pred             C-CCCEEEECCCc
Confidence            3 68999988774

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.86  E-value=0.3  Score=44.75  Aligned_cols=95  Identities=18%  Similarity=0.079  Sum_probs=62.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE------eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF------INPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v------~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      -+|.|+|+|.+|.+.+..+...|. +|.+.++++++.+.+.+.+....      +..+-....+..    +..  +..|+
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~----e~~--~~aD~   77 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPE----EAL--AGADF   77 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHH----HHH--cCCCE
Confidence            368999999999999999888898 99999998887776655421100      000000001122    211  26899


Q ss_pred             EEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          226 CFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       226 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      |+-++... .+..+++.++++ -.++.+..
T Consensus        78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~  105 (328)
T PRK14618         78 AVVAVPSK-ALRETLAGLPRA-LGYVSCAK  105 (328)
T ss_pred             EEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence            99999887 457777888775 56666644

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.86  E-value=0.38  Score=43.88  Aligned_cols=38  Identities=29%  Similarity=0.483  Sum_probs=33.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK  190 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~  190 (335)
                      ++|.|+|+|.+|...++.+...|+ +|...+.+++..+.
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~   45 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA   45 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence            579999999999999999989999 99999999876554

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.86  E-value=0.17  Score=44.33  Aligned_cols=100  Identities=15%  Similarity=0.096  Sum_probs=60.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc--CCceE-eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF--GMTDF-INPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l--ga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      ...+|||+|+ |.+|..++..+...|+ +|+++.+++++.+.....  ++..+ .|..+   .  ...+.+... .++|+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~~-~~~d~   88 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAIG-DDSDA   88 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHhh-cCCCE
Confidence            4578999997 9999999988888899 999998887765433211  22211 23222   1  122322221 26999


Q ss_pred             EEEcCCChH-------------HHHHHHHhhccC-CeEEEEEccC
Q 019822          226 CFECTGVPS-------------LLSEALETTKVG-KGKVIVIGVG  256 (335)
Q Consensus       226 vid~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~  256 (335)
                      ||.+.+...             ....+++.+... .++++.++..
T Consensus        89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            998876421             123444544432 1578887764

>PRK06153 hypothetical protein; Provisional

Probab=94.85  E-value=0.1  Score=48.32  Aligned_cols=35  Identities=26%  Similarity=0.365  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      .+.+|+|+|+|++|..+++++..+|..+++.+|.+
T Consensus       175 ~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D  209 (393)
T PRK06153        175 EGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD  209 (393)
T ss_pred             hhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence            56899999999999999999999999899998854

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.85  E-value=0.23  Score=43.28  Aligned_cols=79  Identities=23%  Similarity=0.201  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh-CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT-HG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~-~g  220 (335)
                      .++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+    ++.+.. +.  .|-.+  +....+.+.+.. ..
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   79 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD--EEAINAGIDYAVETF   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4578999987 9999999998888899 999999988766543    222322 11  23322  122323233221 11


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                      .++|++|.+.+
T Consensus        80 ~~~d~vi~~a~   90 (258)
T PRK12429         80 GGVDILVNNAG   90 (258)
T ss_pred             CCCCEEEECCC
Confidence            26899998876

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.62  Score=40.58  Aligned_cols=38  Identities=18%  Similarity=0.117  Sum_probs=30.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKK  188 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~-~~~~~~  188 (335)
                      .++++||+|+ +.+|.++++.+...|+ +|+.+. +++++.
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~   42 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA   42 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence            4678999987 9999999999999999 887764 444443

>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]

Probab=94.84  E-value=0.23  Score=42.11  Aligned_cols=97  Identities=23%  Similarity=0.182  Sum_probs=72.0

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      .+..+.+..+|.=+|+|+ |...-.|++...-..+.++++|++-++.+++...+.-+         ....++.+......
T Consensus        24 a~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f---------~~aDl~~w~p~~~~   93 (257)
T COG4106          24 ARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATF---------EEADLRTWKPEQPT   93 (257)
T ss_pred             hhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCce---------ecccHhhcCCCCcc
Confidence            334456677888889986 89999999998766999999999999998776544222         22346666666688


Q ss_pred             cEEEEcCC------ChHHHHHHHHhhccCCeEEE
Q 019822          224 DYCFECTG------VPSLLSEALETTKVGKGKVI  251 (335)
Q Consensus       224 d~vid~~g------~~~~~~~~~~~l~~~~G~~v  251 (335)
                      |++|.+..      .+..+..++..|+++ |.+.
T Consensus        94 dllfaNAvlqWlpdH~~ll~rL~~~L~Pg-g~LA  126 (257)
T COG4106          94 DLLFANAVLQWLPDHPELLPRLVSQLAPG-GVLA  126 (257)
T ss_pred             chhhhhhhhhhccccHHHHHHHHHhhCCC-ceEE
Confidence            99985432      355788999999997 7654

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=94.84  E-value=0.052  Score=48.88  Aligned_cols=33  Identities=33%  Similarity=0.397  Sum_probs=27.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID  182 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~  182 (335)
                      +..+|||+|+|++|--+++++.+.|..++=.++
T Consensus        65 k~s~VLVVGaGGLGcPa~~YLaaaGvG~lGiVD   97 (427)
T KOG2017|consen   65 KNSSVLVVGAGGLGCPAAQYLAAAGVGRLGIVD   97 (427)
T ss_pred             CCccEEEEccCCCCCHHHHHHHHcCCCeecccc
Confidence            567899999999999999999999986664444

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.83  E-value=0.17  Score=43.39  Aligned_cols=92  Identities=12%  Similarity=0.031  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ++.+|||+|+|.++.-=+..+...|+ +|.+++..-. ..+.+.+.|.-.... ++..+.    .+      .++++||-
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~~~~~----dl------~g~~LVia   91 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GNYDKE----FI------KDKHLIVI   91 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChH----Hh------CCCcEEEE
Confidence            57799999999999888888888999 8888875432 222233333222221 110001    11      27899999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEEc
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      |++.+..-..+....... +.++-..
T Consensus        92 ATdD~~vN~~I~~~a~~~-~~lvn~v  116 (223)
T PRK05562         92 ATDDEKLNNKIRKHCDRL-YKLYIDC  116 (223)
T ss_pred             CCCCHHHHHHHHHHHHHc-CCeEEEc
Confidence            999884433444444443 5444443

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.82  E-value=0.25  Score=43.55  Aligned_cols=79  Identities=16%  Similarity=0.268  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCC---hhhHHHH-HhcCCceE--eCCCCCCchhHHHHHHhhhC-
Q 019822          150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKN---PWKKEKG-KAFGMTDF--INPDDEPNKSISELVKGITH-  219 (335)
Q Consensus       150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~---~~~~~~~-~~lga~~v--~~~~~~~~~~~~~~i~~~~~-  219 (335)
                      +++++||+|+   +++|.++++.+...|+ +|+.+.+.   +++.+.+ ++++....  .|-.+  +.+..+.+++... 
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~   81 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS--DEQIDALFASLGQH   81 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC--HHHHHHHHHHHHHH
Confidence            4688999983   5899999988888999 88887543   3333333 34443222  23222  2333333333321 


Q ss_pred             -CCCccEEEEcCCC
Q 019822          220 -GMGVDYCFECTGV  232 (335)
Q Consensus       220 -g~g~d~vid~~g~  232 (335)
                       + ++|+++++.|.
T Consensus        82 ~g-~iD~lvnnAG~   94 (260)
T PRK06997         82 WD-GLDGLVHSIGF   94 (260)
T ss_pred             hC-CCcEEEEcccc
Confidence             3 69999988763

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=94.79  E-value=0.24  Score=44.61  Aligned_cols=93  Identities=17%  Similarity=0.254  Sum_probs=55.8

Q ss_pred             CEEEEEcCCHHHHH-HHHHHHHcCCCEEEEEc-CChh--hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          152 SSVAVLGLGTVGLG-AVDGARMHGAAKIIGID-KNPW--KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       152 ~~VlI~G~g~vG~~-ai~la~~~G~~~V~~~~-~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -+|.|+|.|.+|.. +..+.+.-+. ++.+++ .+++  .++.++++|....+       .++...+. ...-.++|+||
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~-~~~~~dIDiVf   75 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLA-MPEFDDIDIVF   75 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHh-CcCCCCCCEEE
Confidence            47899999999987 4444444456 555544 4443  34567778854322       12222222 11124799999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ++++.....+.+..++..+ -++++..
T Consensus        76 ~AT~a~~H~e~a~~a~eaG-k~VID~s  101 (302)
T PRK08300         76 DATSAGAHVRHAAKLREAG-IRAIDLT  101 (302)
T ss_pred             ECCCHHHHHHHHHHHHHcC-CeEEECC
Confidence            9999886666666666664 4555543

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.3  Score=42.34  Aligned_cols=76  Identities=12%  Similarity=0.160  Sum_probs=48.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cC-Cc-eEe--CCCCCCchhHHHHHHhhhCCCC
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KA---FG-MT-DFI--NPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~---lg-a~-~v~--~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      ++++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++   .+ .. .++  |-.+  ..+..+.+.+.. . .
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~-~-~   76 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD--TASHAAFLDSLP-A-L   76 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC--hHHHHHHHHHHh-h-c
Confidence            47899987 9999999999988999 999999988766543 21   11 11 122  3222  123333333332 2 5


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|+++.+.|.
T Consensus        77 ~d~vv~~ag~   86 (243)
T PRK07102         77 PDIVLIAVGT   86 (243)
T ss_pred             CCEEEECCcC
Confidence            7999987763

>PLN03139 formate dehydrogenase; Provisional

Probab=94.76  E-value=0.34  Score=45.31  Aligned_cols=45  Identities=20%  Similarity=0.310  Sum_probs=36.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG  195 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg  195 (335)
                      .+++|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g  242 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG  242 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence            57899999999999999999999999 9999997754333333444

>TIGR00417 speE spermidine synthase

Probab=94.76  E-value=0.34  Score=43.07  Aligned_cols=99  Identities=14%  Similarity=0.071  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-C-ceEe-----CCCCCCchhHHHHHHhhhCCC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-M-TDFI-----NPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-a-~~v~-----~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      ..+++||++|+|. |..+..+++.....++.+++.+++-.+.++++- . ...+     +...   .+..+.+++.  ..
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~---~D~~~~l~~~--~~  144 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQI---DDGFKFLADT--EN  144 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEE---CchHHHHHhC--CC
Confidence            3456999998865 556667777665558999999988777765531 0 0000     0000   2233334332  23


Q ss_pred             CccEEE-EcC---C------ChHHHHHHHHhhccCCeEEEEEc
Q 019822          222 GVDYCF-ECT---G------VPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       222 g~d~vi-d~~---g------~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      .+|+|+ |..   +      ..+.++.+.+.|+++ |.++...
T Consensus       145 ~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~  186 (270)
T TIGR00417       145 TFDVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS  186 (270)
T ss_pred             CccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence            799997 443   1      123567888999998 9998763

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.76  E-value=0.24  Score=49.01  Aligned_cols=75  Identities=12%  Similarity=0.148  Sum_probs=55.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      ++++|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...+. .+.   .+ .+.+++ .+=+.+|.++-+++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~-GD~---~~-~~~L~~-a~i~~a~~viv~~~  490 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVL-GNA---AN-EEIMQL-AHLDCARWLLLTIP  490 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEE-cCC---CC-HHHHHh-cCccccCEEEEEcC
Confidence            678999999999999999999999 999999999999999988865444 222   11 222333 23337888877766


Q ss_pred             Ch
Q 019822          232 VP  233 (335)
Q Consensus       232 ~~  233 (335)
                      +.
T Consensus       491 ~~  492 (558)
T PRK10669        491 NG  492 (558)
T ss_pred             Ch
Confidence            54

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=94.76  E-value=0.26  Score=43.09  Aligned_cols=80  Identities=16%  Similarity=0.096  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      .++++||+|+ +.+|..++..+...|+ +|+.++++.++.+.+    ++.+.. ..  .|-.+  ..+..+.+++... -
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~   86 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL   86 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            4789999987 9999999998888999 899898887765543    222322 12  33332  1222232322211 1


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|+++++.+.
T Consensus        87 ~~~d~li~~ag~   98 (255)
T PRK06113         87 GKVDILVNNAGG   98 (255)
T ss_pred             CCCCEEEECCCC
Confidence            268999998873

>PRK14982 acyl-ACP reductase; Provisional

Probab=94.74  E-value=0.2  Score=45.97  Aligned_cols=95  Identities=18%  Similarity=0.165  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~-~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      -.+++|+|+|+ |.+|..+++.+.. .|..+++.+.+++++.+.+. +++...+        .+    +.+...  +.|+
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i--------~~----l~~~l~--~aDi  218 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI--------LS----LEEALP--EADI  218 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH--------Hh----HHHHHc--cCCE
Confidence            46789999998 9999998888864 57669999999887776653 3431111        11    223222  5899


Q ss_pred             EEEcCCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          226 CFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       226 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      |+.+++.+..+..-...+.+. -.+++++.+-+
T Consensus       219 Vv~~ts~~~~~~I~~~~l~~~-~~viDiAvPRD  250 (340)
T PRK14982        219 VVWVASMPKGVEIDPETLKKP-CLMIDGGYPKN  250 (340)
T ss_pred             EEECCcCCcCCcCCHHHhCCC-eEEEEecCCCC
Confidence            999888753321222445665 67788877644

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=94.73  E-value=0.77  Score=34.91  Aligned_cols=89  Identities=19%  Similarity=0.308  Sum_probs=60.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc--CCCEEE-EEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          153 SVAVLGLGTVGLGAVDGARMH--GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~--G~~~V~-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      +|.|+|.|.+|.....-++..  +. +++ ++++++++.+. .+++|.. .+       .++.+.+.+    .++|+|+-
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~----~~~D~V~I   68 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLAD----EDVDAVII   68 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHH----TTESEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHh----hcCCEEEE
Confidence            578999999998877666655  45 555 55666666665 4677766 33       223333332    27999999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ++......+.+..++..+  .-+++.-+
T Consensus        69 ~tp~~~h~~~~~~~l~~g--~~v~~EKP   94 (120)
T PF01408_consen   69 ATPPSSHAEIAKKALEAG--KHVLVEKP   94 (120)
T ss_dssp             ESSGGGHHHHHHHHHHTT--SEEEEESS
T ss_pred             ecCCcchHHHHHHHHHcC--CEEEEEcC
Confidence            998887778888888774  56666544

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.73  E-value=0.19  Score=43.40  Aligned_cols=80  Identities=21%  Similarity=0.194  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHHhhh-CCCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVKGIT-HGMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~-~g~g~  223 (335)
                      ++.++||+|+ |.+|..++..+...|+ .|+...++.++.+.+ .+++.. .+  .|-.+  .......+.+.. .-.++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD--RDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            4678999987 9999999999988998 898888877766554 334321 12  22222  122222222221 11269


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |.+|.+.|.
T Consensus        82 d~vi~~ag~   90 (245)
T PRK12936         82 DILVNNAGI   90 (245)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=94.73  E-value=0.2  Score=45.19  Aligned_cols=96  Identities=13%  Similarity=0.056  Sum_probs=57.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      +|+|+|+|.+|.+.+..+...|. +|+.+++++++.+.+++.|... -+..............+.   ..+|+||-|+..
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~---~~~d~vila~k~   76 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL-EDGEITVPVLAADDPAEL---GPQDLVILAVKA   76 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc-cCCceeecccCCCChhHc---CCCCEEEEeccc
Confidence            58999999999998888888898 9999998888777776655421 000000000000111111   378999998875


Q ss_pred             hHHHHHHHHh----hccCCeEEEEEcc
Q 019822          233 PSLLSEALET----TKVGKGKVIVIGV  255 (335)
Q Consensus       233 ~~~~~~~~~~----l~~~~G~~v~~g~  255 (335)
                      .. +..+++.    +.++ ..++.+..
T Consensus        77 ~~-~~~~~~~l~~~l~~~-~~iv~~~n  101 (304)
T PRK06522         77 YQ-LPAALPSLAPLLGPD-TPVLFLQN  101 (304)
T ss_pred             cc-HHHHHHHHhhhcCCC-CEEEEecC
Confidence            52 3444443    3343 45665544

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.70  E-value=0.29  Score=43.67  Aligned_cols=93  Identities=19%  Similarity=0.250  Sum_probs=64.7

Q ss_pred             cccchhhhhHHHHHhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCch
Q 019822          131 LSCGFTTGYGAAWKEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK  208 (335)
Q Consensus       131 l~~~~~ta~~~l~~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~  208 (335)
                      +||.....+. +.+..++ -.|++++|+|- ..+|.-++.|+...++ +|++..+.                   .   .
T Consensus       139 ~PcTp~av~~-ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~-------------------T---~  194 (285)
T PRK10792        139 RPCTPRGIMT-LLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRF-------------------T---K  194 (285)
T ss_pred             CCCCHHHHHH-HHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECC-------------------C---C
Confidence            4554433333 3455554 46999999997 5699999999999999 88888642                   1   1


Q ss_pred             hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       209 ~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ++.+.++      .+|++|.++|.+..+..  +.++++ ..++++|..
T Consensus       195 ~l~~~~~------~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin  233 (285)
T PRK10792        195 NLRHHVR------NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN  233 (285)
T ss_pred             CHHHHHh------hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence            2222222      58999999998865443  678887 889999854

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.70  E-value=0.27  Score=43.60  Aligned_cols=79  Identities=16%  Similarity=0.123  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      +.+++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+    +..+... .  .|-.+  .....+.+++..  -
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   85 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD--PDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHhc
Confidence            3468999987 9999999998888899 899988877655433    2233321 2  23222  122333333221  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|.+|.+.|.
T Consensus        86 ~-~id~vi~~Ag~   97 (274)
T PRK07775         86 G-EIEVLVSGAGD   97 (274)
T ss_pred             C-CCCEEEECCCc
Confidence            2 68999988864

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=94.70  E-value=0.31  Score=42.70  Aligned_cols=105  Identities=17%  Similarity=0.195  Sum_probs=67.8

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HhcCCceEeCCCCCCchhHHHHHHhhh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ...+..+.++||-+|.+ +|+.++.+|+.++. .+|+.++.+++..+.+    ++.|...-+....   .+..+.+.++.
T Consensus        73 ~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~l~  148 (247)
T PLN02589         73 MLLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQMI  148 (247)
T ss_pred             HHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHHHH
Confidence            34556677899999974 48888888887642 2899999998877665    4456322222222   34455555543


Q ss_pred             C----CCCccEEE-EcCC--ChHHHHHHHHhhccCCeEEEEE
Q 019822          219 H----GMGVDYCF-ECTG--VPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       219 ~----g~g~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .    ...||+|| |+--  ....++.+++.++++ |.++.=
T Consensus       149 ~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~D  189 (247)
T PLN02589        149 EDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGYD  189 (247)
T ss_pred             hccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEEc
Confidence            2    13799998 5542  334677888999997 776543

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.68  E-value=0.19  Score=44.39  Aligned_cols=77  Identities=18%  Similarity=0.197  Sum_probs=48.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-Ee--CCCCCCchhHHHHHHhhhC-CCCc
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-FI--NPDDEPNKSISELVKGITH-GMGV  223 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~i~~~~~-g~g~  223 (335)
                      ++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+    ++.+... ++  |-.+  ..+..+.+.+... ..++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD--YSQLTALAQACEEKWGGI   78 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence            6899987 9999999988888999 999999888765543    2233222 22  2222  1223332322211 1269


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|++.|.
T Consensus        79 d~lI~~ag~   87 (270)
T PRK05650         79 DVIVNNAGV   87 (270)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.68  E-value=0.31  Score=44.78  Aligned_cols=37  Identities=19%  Similarity=0.443  Sum_probs=33.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK  187 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~  187 (335)
                      .+++|.|+|.|.+|...++.++.+|. +|++.+++...
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~  185 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP  185 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence            57899999999999999999999999 99999987543

>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins

Probab=94.67  E-value=0.4  Score=39.97  Aligned_cols=72  Identities=22%  Similarity=0.225  Sum_probs=56.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      -+.|+++||=+|+|. |.++..|.+..+. +.++++.++++...+.+.|.. |+.      .+....+..+.++ .||+|
T Consensus        10 ~I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq------~Dld~gL~~f~d~-sFD~V   79 (193)
T PF07021_consen   10 WIEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ------GDLDEGLADFPDQ-SFDYV   79 (193)
T ss_pred             HcCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE------CCHHHhHhhCCCC-CccEE
Confidence            368999999999875 7777777777888 999999999999999888865 443      3345566666555 89999


Q ss_pred             EE
Q 019822          227 FE  228 (335)
Q Consensus       227 id  228 (335)
                      |-
T Consensus        80 Il   81 (193)
T PF07021_consen   80 IL   81 (193)
T ss_pred             eh
Confidence            83

Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.66  E-value=0.18  Score=44.68  Aligned_cols=105  Identities=16%  Similarity=0.137  Sum_probs=68.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--ceEeCCCCCCchhHHHHHHhhhC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      +....++.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++...  ..+ ....   .++.   ..-..
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i-~~~~---~D~~---~~~~~  114 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKI-EFEA---NDIL---KKDFP  114 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCce-EEEE---CCcc---cCCCC
Confidence            44667889999999999864 5566777777788 99999999988888765321  111 0000   1111   01112


Q ss_pred             CCCccEEEEc--C---C---ChHHHHHHHHhhccCCeEEEEEccC
Q 019822          220 GMGVDYCFEC--T---G---VPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       220 g~g~d~vid~--~---g---~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ...||+|+..  .   +   ....++.+.+.|+++ |+++.....
T Consensus       115 ~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~  158 (263)
T PTZ00098        115 ENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC  158 (263)
T ss_pred             CCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            2379999852  1   1   124677888999998 999877543

>PRK07411 hypothetical protein; Validated

Probab=94.65  E-value=0.11  Score=48.81  Aligned_cols=36  Identities=25%  Similarity=0.240  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+|||+|+|++|..+++.+...|.+++..+|.+.
T Consensus        37 ~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~   72 (390)
T PRK07411         37 KAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDV   72 (390)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            457899999999999999999999999999998554

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.63  E-value=0.2  Score=47.26  Aligned_cols=74  Identities=23%  Similarity=0.316  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC-ceE--eCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM-TDF--INPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga-~~v--~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      ++++++|+|+ |++|.+.+..+...|+ +|+++++++++.+.. .+.+. ...  .|-.+   .   +.+.+..+  ++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~---~~v~~~l~--~ID  247 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---E---AALAELLE--KVD  247 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---H---HHHHHHhC--CCC
Confidence            4689999987 9999999998888999 999999887665432 11111 112  23332   2   22333332  699


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      ++|++.|.
T Consensus       248 iLInnAGi  255 (406)
T PRK07424        248 ILIINHGI  255 (406)
T ss_pred             EEEECCCc
Confidence            99987763

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.14  Score=45.54  Aligned_cols=36  Identities=25%  Similarity=0.306  Sum_probs=31.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|++++++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence            4678999987 9999999998888999 9999998654

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=94.60  E-value=1.1  Score=37.40  Aligned_cols=99  Identities=18%  Similarity=0.281  Sum_probs=63.7

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc--eEeCCCCCCchhHHHHHHh
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKG  216 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~  216 (335)
                      .....+.++.+||=+|+|. |..++.+++.....+|++++.+++..+.+++    ++..  .++..+.      ..   .
T Consensus        24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~------~~---~   93 (187)
T PRK08287         24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEA------PI---E   93 (187)
T ss_pred             HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCc------hh---h
Confidence            3455677889999998864 7777777776543399999999987776643    3322  2222221      11   1


Q ss_pred             hhCCCCccEEEEcCC---ChHHHHHHHHhhccCCeEEEEEc
Q 019822          217 ITHGMGVDYCFECTG---VPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       217 ~~~g~g~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      + . ..+|+|+....   -...+..+.+.|+++ |+++...
T Consensus        94 ~-~-~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~  131 (187)
T PRK08287         94 L-P-GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF  131 (187)
T ss_pred             c-C-cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence            1 2 26999985432   123667888999997 9987653

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.59  E-value=0.23  Score=48.01  Aligned_cols=70  Identities=26%  Similarity=0.306  Sum_probs=49.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-----hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-----KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~-----~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      ..+++|+|+|+|.+|+.++.+++..|+ +|++++.++.     ..+.+++.|.........   .        .  ..++
T Consensus        14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~--------~--~~~~   79 (480)
T PRK01438         14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T--------L--PEDT   79 (480)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c--------c--cCCC
Confidence            356789999999999999999999999 8999986542     223456677654433322   1        0  1257


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |+|+-+.|-
T Consensus        80 D~Vv~s~Gi   88 (480)
T PRK01438         80 DLVVTSPGW   88 (480)
T ss_pred             CEEEECCCc
Confidence            888887764

>TIGR00452 methyltransferase, putative

Probab=94.55  E-value=0.18  Score=45.83  Aligned_cols=100  Identities=14%  Similarity=0.145  Sum_probs=62.4

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH---HHhc-CC---ceEeCCCCCCchhHHHH
Q 019822          141 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK---GKAF-GM---TDFINPDDEPNKSISEL  213 (335)
Q Consensus       141 ~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~---~~~l-ga---~~v~~~~~~~~~~~~~~  213 (335)
                      .+.......++++||-+|+|. |..+..+++. |+..|++++.++.-...   ++++ +.   .++...      +    
T Consensus       112 ~~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~------~----  179 (314)
T TIGR00452       112 RVLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL------G----  179 (314)
T ss_pred             HHHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC------C----
Confidence            344455677889999999875 7777776654 66589999988864432   2222 21   112211      1    


Q ss_pred             HHhhhCCCCccEEEEcC-----CC-hHHHHHHHHhhccCCeEEEEE
Q 019822          214 VKGITHGMGVDYCFECT-----GV-PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       214 i~~~~~g~g~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      +.++.....||+|+...     .. ...+..+.+.|+++ |+++.-
T Consensus       180 ie~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle  224 (314)
T TIGR00452       180 IEQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE  224 (314)
T ss_pred             HHHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence            22222223799998532     12 24778999999998 998864

Known examples to date are restricted to the proteobacteria.

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=94.55  E-value=0.21  Score=43.14  Aligned_cols=102  Identities=23%  Similarity=0.311  Sum_probs=65.3

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHHHHh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKG  216 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~  216 (335)
                      ....+.++++||=+|+|. |..+..+++..+. .+|++++.+++..+.+++    .+.+.  ++..+.      . .+ .
T Consensus        39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~------~-~~-~  109 (231)
T TIGR02752        39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNA------M-EL-P  109 (231)
T ss_pred             HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEech------h-cC-C
Confidence            445677899999999864 6777788887642 389999999888776643    22221  121111      0 00 1


Q ss_pred             hhCCCCccEEEEcCC------ChHHHHHHHHhhccCCeEEEEEccC
Q 019822          217 ITHGMGVDYCFECTG------VPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       217 ~~~g~g~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      + ....+|+|+-+..      ....+..+.+.|+++ |+++.+...
T Consensus       110 ~-~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~~  153 (231)
T TIGR02752       110 F-DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLETS  153 (231)
T ss_pred             C-CCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEECC
Confidence            1 2237999975322      123567888999997 999877543

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.53  E-value=0.4  Score=37.16  Aligned_cols=92  Identities=21%  Similarity=0.324  Sum_probs=49.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCChhh---HHHHHhcCCc--eEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          153 SVAVLGL-GTVGLGAVDGARM-HGAAKIIGIDKNPWK---KEKGKAFGMT--DFINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~-~G~~~V~~~~~~~~~---~~~~~~lga~--~v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      +|.|+|+ |.+|.++++.+.. -+.+-+-+++++++.   .+...-.|..  .+.-+         ..+.+...  .+|+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~---------~~l~~~~~--~~DV   70 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT---------DDLEELLE--EADV   70 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB---------S-HHHHTT--H-SE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc---------hhHHHhcc--cCCE
Confidence            5889998 9999999999987 677334455544311   1111111111  01001         12333333  3899


Q ss_pred             EEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          226 CFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       226 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      +||++. ++.....++..... |.-+.+|.+.
T Consensus        71 vIDfT~-p~~~~~~~~~~~~~-g~~~ViGTTG  100 (124)
T PF01113_consen   71 VIDFTN-PDAVYDNLEYALKH-GVPLVIGTTG  100 (124)
T ss_dssp             EEEES--HHHHHHHHHHHHHH-T-EEEEE-SS
T ss_pred             EEEcCC-hHHhHHHHHHHHhC-CCCEEEECCC
Confidence            999984 44555555555554 6777777654

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.53  E-value=0.3  Score=42.16  Aligned_cols=69  Identities=25%  Similarity=0.340  Sum_probs=49.9

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          154 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       154 VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      |+|+|+ |.+|..+++.+...+. +|.++.|+..  ..+.++..|+..+. |+.+      .+.+.+...  |+|.||.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~------~~~l~~al~--g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVEADYDD------PESLVAALK--GVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEES-TT-------HHHHHHHHT--TCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEeecccCC------HHHHHHHHc--CCceEEee
Confidence            789997 9999999999998888 8999998764  34556778886442 2222      334444433  69999988


Q ss_pred             CC
Q 019822          230 TG  231 (335)
Q Consensus       230 ~g  231 (335)
                      ++
T Consensus        72 ~~   73 (233)
T PF05368_consen   72 TP   73 (233)
T ss_dssp             SS
T ss_pred             cC
Confidence            87

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=94.51  E-value=0.29  Score=42.56  Aligned_cols=78  Identities=17%  Similarity=0.238  Sum_probs=49.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eE--eCCCCCCchhHHHHHHhhh-CCCC
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DF--INPDDEPNKSISELVKGIT-HGMG  222 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~-~g~g  222 (335)
                      +++||+|+ |.+|..++..+...|+ +|+++++++++.+.+.+    .+.. ..  .|-.+  ..++...+++.. .-.+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence            57999987 9999999999888999 99999998877655432    2221 11  23332  123333232221 1125


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|.+.+.
T Consensus        79 ~d~vi~~a~~   88 (255)
T TIGR01963        79 LDILVNNAGI   88 (255)
T ss_pred             CCEEEECCCC
Confidence            8999987753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.44  E-value=0.3  Score=48.91  Aligned_cols=78  Identities=21%  Similarity=0.266  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      ..+|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...++ .+.   . -.+.+++ .+=..+|.++-++
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa---t-~~~~L~~-agi~~A~~vvv~~  472 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA---T-RMDLLES-AGAAKAEVLINAI  472 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC---C-CHHHHHh-cCCCcCCEEEEEe
Confidence            3679999999999999999999999 999999999999999988865333 332   1 1122333 3334789999888


Q ss_pred             CChHH
Q 019822          231 GVPSL  235 (335)
Q Consensus       231 g~~~~  235 (335)
                      +.++.
T Consensus       473 ~d~~~  477 (621)
T PRK03562        473 DDPQT  477 (621)
T ss_pred             CCHHH
Confidence            87643

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=94.43  E-value=0.32  Score=43.47  Aligned_cols=79  Identities=20%  Similarity=0.217  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcC-CHHHHH-HHHHHHHcCCCEEEEEcCChhhHHHHH-----hcCC---ceEeCCCCCCchh-HHHHHHhh
Q 019822          149 EKGSSVAVLGL-GTVGLG-AVDGARMHGAAKIIGIDKNPWKKEKGK-----AFGM---TDFINPDDEPNKS-ISELVKGI  217 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~-ai~la~~~G~~~V~~~~~~~~~~~~~~-----~lga---~~v~~~~~~~~~~-~~~~i~~~  217 (335)
                      +-+++.+|+|+ .++|.+ +-+||+ .|. +|+.+.|+++|++..+     +.++   ..++|...   ++ .-+.+++.
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~---~~~~ye~i~~~  121 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK---GDEVYEKLLEK  121 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC---CchhHHHHHHH
Confidence            34689999998 789977 556666 999 8999999999998763     2342   13566655   33 24556665


Q ss_pred             hCCCCccEEEEcCCC
Q 019822          218 THGMGVDYCFECTGV  232 (335)
Q Consensus       218 ~~g~g~d~vid~~g~  232 (335)
                      +.+-.+-+.+|++|-
T Consensus       122 l~~~~VgILVNNvG~  136 (312)
T KOG1014|consen  122 LAGLDVGILVNNVGM  136 (312)
T ss_pred             hcCCceEEEEecccc
Confidence            566578888999884

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.42  E-value=0.17  Score=46.75  Aligned_cols=75  Identities=17%  Similarity=0.159  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC----CceE-eCCCCCCchhHHHHHHhhhCCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG----MTDF-INPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg----a~~v-~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      ++.+|||+|+ |.+|..+++.+...|. +|+++++++...... +.++    ...+ .|-.+   .   +.++++....+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~---~~~~~~~~~~~   75 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD---A---AKLRKAIAEFK   75 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC---H---HHHHHHHhhcC
Confidence            4688999987 9999999999999999 999998776543221 2221    1111 12222   1   22333333336


Q ss_pred             ccEEEEcCC
Q 019822          223 VDYCFECTG  231 (335)
Q Consensus       223 ~d~vid~~g  231 (335)
                      +|+||++.+
T Consensus        76 ~d~vih~A~   84 (349)
T TIGR02622        76 PEIVFHLAA   84 (349)
T ss_pred             CCEEEECCc
Confidence            899999886

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.42  E-value=0.68  Score=40.16  Aligned_cols=105  Identities=16%  Similarity=0.098  Sum_probs=59.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHH----HHHhcCCc-eE--eCCCCCCchhHHHHHHhhhC-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKE----KGKAFGMT-DF--INPDDEPNKSISELVKGITH-  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~-~~~~~----~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~-  219 (335)
                      .++++||+|+ |.+|..++.-+...|+ +|+.+.++ .++..    .+++.+.. ..  .|..+  ..+....+++... 
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   81 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDR   81 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHH
Confidence            3578999987 9999999998888999 77666533 22222    22333322 12  23322  1222222222211 


Q ss_pred             CCCccEEEEcCCC----------hH---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          220 GMGVDYCFECTGV----------PS---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       220 g~g~d~vid~~g~----------~~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      -.++|.+|.+.|.          .+               ..+.+.+.+... |+++.++....
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~~  144 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVAG  144 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchhc
Confidence            1268999998873          10               122334455665 88988876544

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=94.36  E-value=1.9  Score=37.65  Aligned_cols=100  Identities=16%  Similarity=0.184  Sum_probs=64.1

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ceEeCCCCCCchhHHHHHHhhhCCCC
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      +.....+..+||-+|+|+ |..+..+++ .|. +|++++.+++..+.+++... ...+..+.   ..    + .+ ....
T Consensus        36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~----~-~~-~~~~  103 (251)
T PRK10258         36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ES----L-PL-ATAT  103 (251)
T ss_pred             HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---cc----C-cC-CCCc
Confidence            334445678899999875 666666654 577 99999999999888876542 12221111   00    0 11 2236


Q ss_pred             ccEEEEcCC------ChHHHHHHHHhhccCCeEEEEEccC
Q 019822          223 VDYCFECTG------VPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       223 ~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +|+|+....      -...+..+.+.|+++ |.++.....
T Consensus       104 fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~~  142 (251)
T PRK10258        104 FDLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTLV  142 (251)
T ss_pred             EEEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            999986432      124678889999998 998877543

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.34  E-value=0.62  Score=41.81  Aligned_cols=39  Identities=26%  Similarity=0.269  Sum_probs=34.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      .+|.|+|+|.+|...++.+...|. +|+.++.++++.+.+
T Consensus         4 ~kIaViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~   42 (287)
T PRK08293          4 KNVTVAGAGVLGSQIAFQTAFHGF-DVTIYDISDEALEKA   42 (287)
T ss_pred             cEEEEECCCHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHH
Confidence            579999999999999998888898 999999998876655

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=94.33  E-value=0.61  Score=42.09  Aligned_cols=43  Identities=23%  Similarity=0.326  Sum_probs=37.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  196 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga  196 (335)
                      +|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+
T Consensus         3 ~Ig~IGlG~mG~~mA~~l~~~G~-~V~v~d~~~~~~~~~~~~g~   45 (296)
T PRK15461          3 AIAFIGLGQMGSPMASNLLKQGH-QLQVFDVNPQAVDALVDKGA   45 (296)
T ss_pred             eEEEEeeCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHcCC
Confidence            68889999999988888888898 99999999999888776664

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=94.32  E-value=0.22  Score=44.54  Aligned_cols=73  Identities=21%  Similarity=0.188  Sum_probs=45.2

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCceE--------eCCCCCCchhHHHHHHhhhC
Q 019822          154 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GMTDF--------INPDDEPNKSISELVKGITH  219 (335)
Q Consensus       154 VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----ga~~v--------~~~~~~~~~~~~~~i~~~~~  219 (335)
                      |||+|+ |.+|..+++-+...+.++++.+++++.++-.+ +++    ....+        -|..      -.+.+.+...
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr------d~~~l~~~~~   74 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR------DKERLNRIFE   74 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC------HHHHHHHHTT
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc------CHHHHHHHHh
Confidence            799986 99999999988888887999999999887665 334    11111        1222      2345566666


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      ..++|+||.+..-
T Consensus        75 ~~~pdiVfHaAA~   87 (293)
T PF02719_consen   75 EYKPDIVFHAAAL   87 (293)
T ss_dssp             --T-SEEEE----
T ss_pred             hcCCCEEEEChhc
Confidence            5689999997754

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.31  E-value=0.41  Score=42.88  Aligned_cols=36  Identities=25%  Similarity=0.301  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .+++++||+|+ +++|.+.++.+...|+ +|+.++++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV   40 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            45789999987 9999999998888999 888887653

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=94.31  E-value=0.25  Score=44.85  Aligned_cols=98  Identities=10%  Similarity=0.096  Sum_probs=58.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCceEeCCCCCCchhHHHHHHhh--hCCCCccEEEEc
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFINPDDEPNKSISELVKGI--THGMGVDYCFEC  229 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga~~v~~~~~~~~~~~~~~i~~~--~~g~g~d~vid~  229 (335)
                      +|+|+|+|++|...+-.+...|. +|..+++++++.+..++- |.. +.+...   . ..-.+...  .....+|+||-|
T Consensus         4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~---~-~~~~~~~~~~~~~~~~D~viv~   77 (305)
T PRK05708          4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ---A-SLYAIPAETADAAEPIHRLLLA   77 (305)
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc---c-eeeccCCCCcccccccCEEEEE
Confidence            69999999999987777777898 999999987777766543 421 211111   0 00000000  011268999988


Q ss_pred             CCCh---HHHHHHHHhhccCCeEEEEEccCC
Q 019822          230 TGVP---SLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       230 ~g~~---~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      +=+.   +.+..+...+.++ ..++.+.+..
T Consensus        78 vK~~~~~~al~~l~~~l~~~-t~vv~lQNGv  107 (305)
T PRK05708         78 CKAYDAEPAVASLAHRLAPG-AELLLLQNGL  107 (305)
T ss_pred             CCHHhHHHHHHHHHhhCCCC-CEEEEEeCCC
Confidence            7543   2334444555665 6676665443

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.31  E-value=0.27  Score=43.10  Aligned_cols=37  Identities=19%  Similarity=0.242  Sum_probs=32.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK  187 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~  187 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+++++++.+
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~   45 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPD   45 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhh
Confidence            5789999987 9999999999988999 99999987543

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.26  E-value=0.45  Score=44.35  Aligned_cols=35  Identities=29%  Similarity=0.434  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      .+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45789999999999999999999999899999865

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.26  E-value=0.42  Score=43.45  Aligned_cols=36  Identities=14%  Similarity=0.264  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      .+++|.|+|.|.+|...++.++.+|. +|++.+++.+
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~  170 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK  170 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence            57899999999999999999999999 9999987553

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.25  E-value=0.35  Score=42.54  Aligned_cols=104  Identities=18%  Similarity=0.197  Sum_probs=60.4

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh------hhHHHHHhcCC-ceE--eCCCCCCchhHHHHHHhh
Q 019822          150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNP------WKKEKGKAFGM-TDF--INPDDEPNKSISELVKGI  217 (335)
Q Consensus       150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~------~~~~~~~~lga-~~v--~~~~~~~~~~~~~~i~~~  217 (335)
                      .++++||+|+   +++|.+++..+...|+ +|+.+.++.      +..+.+++.+. ...  .|-.+  +....+.+++.
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~   81 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD--DAQIEETFETI   81 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC--HHHHHHHHHHH
Confidence            4688999985   4899999999988999 888775432      22222322221 112  23322  12333333332


Q ss_pred             h--CCCCccEEEEcCCCh-------H----------------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          218 T--HGMGVDYCFECTGVP-------S----------------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       218 ~--~g~g~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      .  .+ ++|+++++.|..       .                      ..+.+++.+..+ |+++.++...+
T Consensus        82 ~~~~g-~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~~  151 (258)
T PRK07370         82 KQKWG-KLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLGG  151 (258)
T ss_pred             HHHcC-CCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecccc
Confidence            2  13 699999988731       0                      123455566666 89888876443

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.23  E-value=0.46  Score=42.95  Aligned_cols=43  Identities=26%  Similarity=0.401  Sum_probs=36.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  196 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga  196 (335)
                      +|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+
T Consensus         2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~   44 (301)
T PRK09599          2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGA   44 (301)
T ss_pred             EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCC
Confidence            58889999999988888877898 99999999998887777664

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.22  E-value=0.4  Score=44.48  Aligned_cols=36  Identities=31%  Similarity=0.315  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+|||+|+|++|..++..+...|.+++..+|.+.
T Consensus        27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            457899999999999999999999999999998654

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=94.20  E-value=0.19  Score=49.16  Aligned_cols=45  Identities=24%  Similarity=0.398  Sum_probs=37.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG  195 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg  195 (335)
                      .++++||+|+|++|.+++..+...|+ +|+++.++.++.+.+ ++++
T Consensus       378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVG  423 (529)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhC
Confidence            46789999999999999999999999 999999988776665 4454

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.16  E-value=0.25  Score=42.93  Aligned_cols=79  Identities=20%  Similarity=0.212  Sum_probs=48.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIG-IDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~-~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ |.+|..++..+...|+ +|+. ..++.++.+.+    ++.+... .  .|-.+  +.+....+++..  
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   79 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD--VEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4578999987 9999999999999999 7765 46666554332    3334321 2  23222  133333333321  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|++|++.|.
T Consensus        80 ~~-~id~vi~~ag~   92 (250)
T PRK08063         80 FG-RLDVFVNNAAS   92 (250)
T ss_pred             cC-CCCEEEECCCC
Confidence            12 68999998763

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.15  E-value=0.4  Score=41.92  Aligned_cols=80  Identities=14%  Similarity=0.144  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhhC-CCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITH-GMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~-~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~-g~g~d~  225 (335)
                      .++++||+|+ |.+|.+.++.+...|+ +|+.+.++ ++..+.+++.+... ..|-.+  .....+.+++... -.++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence            4678999987 9999999999988999 88776543 33444444434322 223332  1233333333211 126899


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      +|.+.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998864

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=94.14  E-value=0.86  Score=38.85  Aligned_cols=118  Identities=14%  Similarity=0.098  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      .+++|||+|+|.+|.-=+.++...|+ +|+++..+- .++..+.+.+-...+. +.     +...  .+   .++++||-
T Consensus        11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~-----~~~~--~~---~~~~lvia   78 (210)
T COG1648          11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-RE-----FDAE--DL---DDAFLVIA   78 (210)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cc-----cChh--hh---cCceEEEE
Confidence            57899999999999999999999999 888887655 3333333322211111 11     1111  11   14899999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHh-hcCcEEEEeecc
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALA-CGGRTLKGTTFG  281 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~  281 (335)
                      +++.+..-+.+....... +.++-+-+... ..++....+. ...+.+.-++.|
T Consensus        79 At~d~~ln~~i~~~a~~~-~i~vNv~D~p~-~~~f~~Pa~~~r~~l~iaIsT~G  130 (210)
T COG1648          79 ATDDEELNERIAKAARER-RILVNVVDDPE-LCDFIFPAIVDRGPLQIAISTGG  130 (210)
T ss_pred             eCCCHHHHHHHHHHHHHh-CCceeccCCcc-cCceecceeeccCCeEEEEECCC
Confidence            999885555666666665 66555544332 1222222222 344555555444

>PRK12746 short chain dehydrogenase; Provisional

Probab=94.14  E-value=0.4  Score=41.80  Aligned_cols=80  Identities=16%  Similarity=0.220  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH-Hhc---CCc-eEe--CCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG-KAF---GMT-DFI--NPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~~~~~~~-~~l---ga~-~v~--~~~~~~~~~~~~~i~~~~--  218 (335)
                      .+.+++|+|+ |.+|..+++.+...|+ +|++. .++.++.+.+ +++   +.. .++  |-.+  ..++...+++..  
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~   81 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS--IDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC--HHHHHHHHHHHHHH
Confidence            3578999987 9999999998888899 77664 6666554332 222   221 122  3332  233333333322  


Q ss_pred             -----CCCCccEEEEcCCC
Q 019822          219 -----HGMGVDYCFECTGV  232 (335)
Q Consensus       219 -----~g~g~d~vid~~g~  232 (335)
                           +..++|++|.+.|.
T Consensus        82 ~~~~~~~~~id~vi~~ag~  100 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGI  100 (254)
T ss_pred             hccccCCCCccEEEECCCC
Confidence                 11368999988864

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=94.11  E-value=0.9  Score=43.14  Aligned_cols=74  Identities=22%  Similarity=0.314  Sum_probs=51.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhh---------hCCCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI---------THGMG  222 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~---------~~g~g  222 (335)
                      .+|.|+|.|-+|...+..+...|. +|+++++++++.+.++. |...   ..+   ++..+.+++.         +.-++
T Consensus         4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~---~~e---~~l~~~l~~~~~~g~l~~~~~~~~   75 (415)
T PRK11064          4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIH---IVE---PDLDMVVKTAVEGGYLRATTTPEP   75 (415)
T ss_pred             cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCC---cCC---CCHHHHHHHHhhcCceeeeccccc
Confidence            578999999999998888888898 99999999999887643 3221   122   3333333221         11226


Q ss_pred             ccEEEEcCCCh
Q 019822          223 VDYCFECTGVP  233 (335)
Q Consensus       223 ~d~vid~~g~~  233 (335)
                      .|++|-|++.+
T Consensus        76 aDvvii~vptp   86 (415)
T PRK11064         76 ADAFLIAVPTP   86 (415)
T ss_pred             CCEEEEEcCCC
Confidence            89999999874

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.10  E-value=0.53  Score=42.58  Aligned_cols=79  Identities=22%  Similarity=0.313  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHH----HHhcCCceE-e--CCCCCCchhHHHHHHhhh-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKEK----GKAFGMTDF-I--NPDDEPNKSISELVKGIT-H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~-~~~~~----~~~lga~~v-~--~~~~~~~~~~~~~i~~~~-~  219 (335)
                      .++++||+|+ +++|.+.++.+...|+ +|++.+++. ++.+.    +++.|.... +  |-.+  .....+.+++.. -
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d--~~~~~~~~~~~~~~   87 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ--RATADELVATAVGL   87 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHh
Confidence            5678999987 9999999998888999 888887643 22222    233343221 1  2222  122222222211 1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|++.|.
T Consensus        88 g-~iD~li~nAG~   99 (306)
T PRK07792         88 G-GLDIVVNNAGI   99 (306)
T ss_pred             C-CCCEEEECCCC
Confidence            3 69999998874

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.08  E-value=0.31  Score=43.33  Aligned_cols=80  Identities=23%  Similarity=0.224  Sum_probs=52.4

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHhcC-C-ceEeCCCCCCchh---HHHHHHhh
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE----KGKAFG-M-TDFINPDDEPNKS---ISELVKGI  217 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~----~~~~lg-a-~~v~~~~~~~~~~---~~~~i~~~  217 (335)
                      .-.|+.|||+|+ +++|.+.++=+..+|+ +++.++.+++..+    .+++.| + ..+.|-.+  .++   .++.+++.
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKE  111 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHh
Confidence            346899999986 8999998877777898 8888887765433    334445 2 23444322  133   34444444


Q ss_pred             hCCCCccEEEEcCCC
Q 019822          218 THGMGVDYCFECTGV  232 (335)
Q Consensus       218 ~~g~g~d~vid~~g~  232 (335)
                      . | .+|+++|..|-
T Consensus       112 ~-G-~V~ILVNNAGI  124 (300)
T KOG1201|consen  112 V-G-DVDILVNNAGI  124 (300)
T ss_pred             c-C-CceEEEecccc
Confidence            3 3 79999998873

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.08  E-value=0.27  Score=42.53  Aligned_cols=79  Identities=20%  Similarity=0.225  Sum_probs=48.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHHH----hcCCc-eEe--CCCCCCchhHHHHHHhhhC-C
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKGK----AFGMT-DFI--NPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      ++++||+|+ |.+|..++..+...|+ +|+.+ .++.++.+.+.    ..+.. .++  |-.+  +....+.+.+... -
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS--EEDVENLVEQIVEKF   81 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            468999987 9999999988888899 88888 88776654432    22221 122  3222  1222222222211 1


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|++|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (247)
T PRK05565         82 GKIDILVNNAGI   93 (247)
T ss_pred             CCCCEEEECCCc
Confidence            169999987764

>PRK04266 fibrillarin; Provisional

Probab=94.07  E-value=0.97  Score=39.05  Aligned_cols=102  Identities=19%  Similarity=0.174  Sum_probs=62.0

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCceEeCCCCCCchhHHHHHHhhhC
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      +...++++++||=+|+|+ |..+..+++..+..+|++++.+++..+.+.+.    ..-..+..+.   ... .....+ .
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~-~~~~~l-~  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKP-ERYAHV-V  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCc-chhhhc-c
Confidence            457889999999998764 55666677766534899999999876654222    1111221121   110 000111 1


Q ss_pred             CCCccEEEEcCCCh----HHHHHHHHhhccCCeEEEEE
Q 019822          220 GMGVDYCFECTGVP----SLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       220 g~g~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~  253 (335)
                      . .+|+|+.-...+    ..+..+.+.|+++ |+++..
T Consensus       140 ~-~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        140 E-KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             c-cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            2 599999544332    1367888899998 998874

>PRK08219 short chain dehydrogenase; Provisional

Probab=94.07  E-value=0.44  Score=40.60  Aligned_cols=75  Identities=11%  Similarity=0.052  Sum_probs=46.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCC-CCccEEEE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHG-MGVDYCFE  228 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g-~g~d~vid  228 (335)
                      .++||+|+ |.+|..++..+... + +|++++++.++.+.+.+ ....+++..+-   .+ .+.+++.... .++|.+|.
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~vi~   77 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL---TD-PEAIAAAVEQLGRLDVLVH   77 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC---CC-HHHHHHHHHhcCCCCEEEE
Confidence            57999987 99999988877666 7 89999998877655542 21122222221   11 1223332221 26999999


Q ss_pred             cCCC
Q 019822          229 CTGV  232 (335)
Q Consensus       229 ~~g~  232 (335)
                      +.|.
T Consensus        78 ~ag~   81 (227)
T PRK08219         78 NAGV   81 (227)
T ss_pred             CCCc
Confidence            8874

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.06  E-value=0.38  Score=48.00  Aligned_cols=94  Identities=11%  Similarity=0.096  Sum_probs=65.2

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      .+|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...++ .+.    .-.+.+++ .+=+++|.++-+++
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa----t~~~~L~~-agi~~A~~vv~~~~  473 (601)
T PRK03659        401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDA----TQLELLRA-AGAEKAEAIVITCN  473 (601)
T ss_pred             CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeC----CCHHHHHh-cCCccCCEEEEEeC
Confidence            578999999999999999999999 999999999999999998865433 222    11222333 33447899999988


Q ss_pred             ChHHHHHH---HHhhccCCeEEEEE
Q 019822          232 VPSLLSEA---LETTKVGKGKVIVI  253 (335)
Q Consensus       232 ~~~~~~~~---~~~l~~~~G~~v~~  253 (335)
                      .+..-..+   .+...++ -+++.-
T Consensus       474 d~~~n~~i~~~~r~~~p~-~~IiaR  497 (601)
T PRK03659        474 EPEDTMKIVELCQQHFPH-LHILAR  497 (601)
T ss_pred             CHHHHHHHHHHHHHHCCC-CeEEEE
Confidence            76432233   3344454 455443

>PRK12743 oxidoreductase; Provisional

Probab=94.05  E-value=0.31  Score=42.67  Aligned_cols=78  Identities=12%  Similarity=0.100  Sum_probs=47.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHhcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEK----GKAFGMT-DF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~----~~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      ++++||+|+ +.+|..+++.+...|+ +|+.+.+ +.++.+.    ++..+.. +.  .|-.+  .......+.+..  -
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            468999987 9999999999999999 8877753 4443332    2334432 22  23322  122222222221  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + .+|.+|.+.|.
T Consensus        79 ~-~id~li~~ag~   90 (256)
T PRK12743         79 G-RIDVLVNNAGA   90 (256)
T ss_pred             C-CCCEEEECCCC
Confidence            2 68999988763

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.03  E-value=0.21  Score=47.04  Aligned_cols=36  Identities=19%  Similarity=0.220  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+|||+|+|++|..++..+...|.+++..+|.+.
T Consensus        41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D~   76 (392)
T PRK07878         41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFDV   76 (392)
T ss_pred             hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCCE
Confidence            457899999999999999999999998999888543

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.02  E-value=0.17  Score=42.09  Aligned_cols=38  Identities=32%  Similarity=0.416  Sum_probs=32.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      +|.|+|+|.+|...+.++...|. +|...+.+++.++.+
T Consensus         1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~   38 (180)
T PF02737_consen    1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERA   38 (180)
T ss_dssp             EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHH
T ss_pred             CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhh
Confidence            58899999999999999998999 999999999877654

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=94.01  E-value=0.68  Score=44.14  Aligned_cols=104  Identities=13%  Similarity=0.199  Sum_probs=65.5

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKG  216 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~  216 (335)
                      ......++++||=+|+|+ |..++.+++.++..+|++++.++++.+.+    +++|.. .+  .+.+.   ...    ..
T Consensus       232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~----~~  303 (426)
T TIGR00563       232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGP----SQ  303 (426)
T ss_pred             HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccc----cc
Confidence            445678899999998754 55556666666533999999999987765    445654 22  22221   100    00


Q ss_pred             hhCCCCccEEE-E--cCCC-------------------------hHHHHHHHHhhccCCeEEEEEccC
Q 019822          217 ITHGMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       217 ~~~g~g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ......||.|+ |  |+|.                         ...+..+++.|+++ |+++..-..
T Consensus       304 ~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystcs  370 (426)
T TIGR00563       304 WAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATCS  370 (426)
T ss_pred             cccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence            11223699987 4  4542                         23667788899997 998866443

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK12335 tellurite resistance protein TehB; Provisional

Probab=93.98  E-value=0.11  Score=46.57  Aligned_cols=92  Identities=21%  Similarity=0.236  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      .++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++    .+.. .+...+      ... . .+  ...+
T Consensus       119 ~~~~~vLDlGcG~-G~~~~~la~-~g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~~~D------~~~-~-~~--~~~f  185 (287)
T PRK12335        119 VKPGKALDLGCGQ-GRNSLYLAL-LGF-DVTAVDINQQSLENLQEIAEKENLNIRTGLYD------INS-A-SI--QEEY  185 (287)
T ss_pred             cCCCCEEEeCCCC-CHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHHcCCceEEEEec------hhc-c-cc--cCCc
Confidence            3455899999864 666666666 477 99999999987776643    2321 111111      100 0 11  2379


Q ss_pred             cEEEEcCC--------ChHHHHHHHHhhccCCeEEEEEc
Q 019822          224 DYCFECTG--------VPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       224 d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      |+|+.+.-        -...+..+.+.|+++ |.++.+.
T Consensus       186 D~I~~~~vl~~l~~~~~~~~l~~~~~~Lkpg-G~~l~v~  223 (287)
T PRK12335        186 DFILSTVVLMFLNRERIPAIIKNMQEHTNPG-GYNLIVC  223 (287)
T ss_pred             cEEEEcchhhhCCHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            99986532        123567888889997 9866554

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=93.97  E-value=0.59  Score=41.02  Aligned_cols=78  Identities=22%  Similarity=0.243  Sum_probs=47.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH-Hh----cCCc-eE--eCCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG-KA----FGMT-DF--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~-~~----lga~-~v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      +++++||+|+ +++|.+++..+...|+ +|+.+.+ ++++.+.+ ++    .+.. ..  .|-.+  +.+..+.+.+.. 
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~   83 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE--PETYKELFKKIDE   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence            5789999987 9999999999989999 8887754 44443332 22    2321 12  23332  233333333322 


Q ss_pred             -CCCCccEEEEcCC
Q 019822          219 -HGMGVDYCFECTG  231 (335)
Q Consensus       219 -~g~g~d~vid~~g  231 (335)
                       -+ ++|+++++.|
T Consensus        84 ~~g-~id~lv~nAg   96 (260)
T PRK08416         84 DFD-RVDFFISNAI   96 (260)
T ss_pred             hcC-CccEEEECcc
Confidence             13 6899998775

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.97  E-value=0.62  Score=41.88  Aligned_cols=93  Identities=16%  Similarity=0.207  Sum_probs=64.3

Q ss_pred             cccchhhhhHHHHHhcCC-CCCCEEEEEc-CCHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHhcCCceEeCCCCCCc
Q 019822          131 LSCGFTTGYGAAWKEAKV-EKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGID-KNPWKKEKGKAFGMTDFINPDDEPN  207 (335)
Q Consensus       131 l~~~~~ta~~~l~~~~~~-~~~~~VlI~G-~g~vG~~ai~la~~~G~~~V~~~~-~~~~~~~~~~~lga~~v~~~~~~~~  207 (335)
                      +||.....+. +.+..++ -.|++|+|+| .+.+|...+.++...|+ .|++.. +++                      
T Consensus       138 ~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~----------------------  193 (296)
T PRK14188        138 VPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR----------------------  193 (296)
T ss_pred             cCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC----------------------
Confidence            4544333333 3344443 5799999999 59999999999999999 999885 332                      


Q ss_pred             hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                       +..+.+      +..|+|+-++|.+..+...+  +.++ ..++++|...
T Consensus       194 -~l~e~~------~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~  233 (296)
T PRK14188        194 -DLPAVC------RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR  233 (296)
T ss_pred             -CHHHHH------hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence             111111      15799999999987666554  7886 8888988653

>PRK12937 short chain dehydrogenase; Provisional

Probab=93.95  E-value=0.4  Score=41.42  Aligned_cols=35  Identities=11%  Similarity=0.068  Sum_probs=29.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+.+.++.
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~   39 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGS   39 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCC
Confidence            5678999987 9999999999999999 777776543

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.94  E-value=0.55  Score=41.90  Aligned_cols=84  Identities=18%  Similarity=0.273  Sum_probs=60.6

Q ss_pred             HHHhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhC
Q 019822          142 AWKEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       142 l~~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      +.+..++ -.|++|+|+|. ..+|.-++.++...|+ +|+...+.                   .   .++.+.++    
T Consensus       148 lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~-------------------t---~~l~~~~~----  200 (285)
T PRK14189        148 MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK-------------------T---RDLAAHTR----  200 (285)
T ss_pred             HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC-------------------C---CCHHHHhh----
Confidence            3454553 47899999997 5669999999999999 88876421                   1   22322232    


Q ss_pred             CCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          220 GMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       220 g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                        ..|+|+-++|.+..+..  +.++++ ..++.+|...
T Consensus       201 --~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin~  233 (285)
T PRK14189        201 --QADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMNR  233 (285)
T ss_pred             --hCCEEEEcCCCcCccCH--HHcCCC-CEEEEccccc
Confidence              58999999998865443  778897 8999998653

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=93.94  E-value=1  Score=40.61  Aligned_cols=43  Identities=23%  Similarity=0.481  Sum_probs=36.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  196 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga  196 (335)
                      +|-++|.|.+|...+.-+...|. +|++.++++++.+.+++.|+
T Consensus         2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~   44 (299)
T PRK12490          2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGI   44 (299)
T ss_pred             EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCC
Confidence            57888999999988888878898 89999999988888877774

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=93.91  E-value=0.23  Score=44.61  Aligned_cols=37  Identities=19%  Similarity=0.288  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      +++++||+|+|+.+.+++..+...|+++++++.|+++
T Consensus       123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~  159 (288)
T PRK12749        123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDE  159 (288)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence            5679999999888988777777789889999999853

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.91  E-value=0.32  Score=46.64  Aligned_cols=70  Identities=29%  Similarity=0.373  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh-hhH----HHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP-WKK----EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~-~~~----~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      .+++|+|+|+|.+|+.++..+...|+ +|++++.+. +..    +.+.+.|.. ++..+.   .+      +.. + ++|
T Consensus         4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~---~~------~~~-~-~~d   70 (450)
T PRK14106          4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIE-LVLGEY---PE------EFL-E-GVD   70 (450)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCc---ch------hHh-h-cCC
Confidence            46889999998899999999999999 999999764 222    334455654 332222   11      111 2 689


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      +|+.+.|.
T Consensus        71 ~vv~~~g~   78 (450)
T PRK14106         71 LVVVSPGV   78 (450)
T ss_pred             EEEECCCC
Confidence            99988874

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=93.90  E-value=0.36  Score=41.63  Aligned_cols=106  Identities=21%  Similarity=0.200  Sum_probs=65.9

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCc----eEeCCCCCCchhHHHHHHhhh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMT----DFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lga~----~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ......++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-..    ..+....   .++...   ..
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~---~~  117 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ---GDAEAL---PF  117 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe---cccccC---CC
Confidence            344556788999999876 888888888775 23999999998887777553211    1011110   111110   01


Q ss_pred             CCCCccEEEEcCC------ChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          219 HGMGVDYCFECTG------VPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       219 ~g~g~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      ....+|+|+....      ....+..+.+.|+++ |+++.+....
T Consensus       118 ~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~~  161 (239)
T PRK00216        118 PDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFSK  161 (239)
T ss_pred             CCCCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEecC
Confidence            2236899874321      234677888999998 9998876543

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=93.88  E-value=0.89  Score=36.08  Aligned_cols=84  Identities=23%  Similarity=0.200  Sum_probs=59.1

Q ss_pred             HHHhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhC
Q 019822          142 AWKEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       142 l~~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      +.+..++ -.|++|+|+|- ..+|.-++.++...|+ +|..+++...                      +..+.++    
T Consensus        18 ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~----------------------~l~~~v~----   70 (140)
T cd05212          18 LLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI----------------------QLQSKVH----   70 (140)
T ss_pred             HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc----------------------CHHHHHh----
Confidence            3344443 47899999996 8999999999999999 8888874321                      1222222    


Q ss_pred             CCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          220 GMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       220 g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                        .+|+|+.++|.+..+.  -+.++++ ..++.+|...
T Consensus        71 --~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~~  103 (140)
T cd05212          71 --DADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPTK  103 (140)
T ss_pred             --hCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCCc
Confidence              5899999999875444  4558886 7888776543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=93.88  E-value=0.39  Score=46.44  Aligned_cols=70  Identities=13%  Similarity=0.179  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      .+.+++|+|+|++|.+++..+...|+ +|+++++++++.+.+ ++++.. .++..+         +.++   ..+|+|++
T Consensus       331 ~~k~vlIiGaGgiG~aia~~L~~~G~-~V~i~~R~~~~~~~la~~~~~~-~~~~~~---------~~~l---~~~DiVIn  396 (477)
T PRK09310        331 NNQHVAIVGAGGAAKAIATTLARAGA-ELLIFNRTKAHAEALASRCQGK-AFPLES---------LPEL---HRIDIIIN  396 (477)
T ss_pred             CCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccc-eechhH---------hccc---CCCCEEEE
Confidence            56789999999999999999999999 999999888776654 333321 221111         1111   26899999


Q ss_pred             cCCCh
Q 019822          229 CTGVP  233 (335)
Q Consensus       229 ~~g~~  233 (335)
                      |++..
T Consensus       397 atP~g  401 (477)
T PRK09310        397 CLPPS  401 (477)
T ss_pred             cCCCC
Confidence            98754

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.88  E-value=0.41  Score=45.85  Aligned_cols=71  Identities=20%  Similarity=0.278  Sum_probs=47.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhh----HHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK----KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~----~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      .+++++|+|.|.+|.+++.+++..|+ +|++.+.+...    .+.+++.|.......+.   .+.   +    . +++|+
T Consensus         4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~---~~~---~----~-~~~d~   71 (447)
T PRK02472          4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP---LEL---L----D-EDFDL   71 (447)
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC---HHH---h----c-CcCCE
Confidence            46789999998899999999999999 99999865422    23345566543322222   111   1    1 14899


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      |+.+.|-
T Consensus        72 vV~s~gi   78 (447)
T PRK02472         72 MVKNPGI   78 (447)
T ss_pred             EEECCCC
Confidence            9887754

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.83  E-value=0.62  Score=44.53  Aligned_cols=43  Identities=23%  Similarity=0.400  Sum_probs=35.6

Q ss_pred             EEEEEc-CCHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHhcCC
Q 019822          153 SVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGM  196 (335)
Q Consensus       153 ~VlI~G-~g~vG~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lga  196 (335)
                      +|.|+| .|.+|.+.+..++..|. +|+++++++++. +.++++|+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~-~V~v~~r~~~~~~~~a~~~gv   46 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGF-EVIVTGRDPKKGKEVAKELGV   46 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHcCC
Confidence            588997 59999999999999998 999999888774 55566665

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=93.81  E-value=1.1  Score=42.76  Aligned_cols=103  Identities=17%  Similarity=0.191  Sum_probs=64.8

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCce--EeCCCCCCchhHHHHHHh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTD--FINPDDEPNKSISELVKG  216 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i~~  216 (335)
                      ......++++||=+|+|+ |..+++++..++ ..+|++++.++++.+.++    ++|.+.  ++..+.   ..    +.+
T Consensus       231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~----l~~  302 (431)
T PRK14903        231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ER----LTE  302 (431)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hh----hhh
Confidence            345678899999888754 556666777662 239999999999987764    456543  222221   11    111


Q ss_pred             hhCCCCccEEE-E--cCCCh-------------------------HHHHHHHHhhccCCeEEEEEccC
Q 019822          217 ITHGMGVDYCF-E--CTGVP-------------------------SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       217 ~~~g~g~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ...+ .||.|+ |  |+|..                         ..+..+++.++++ |+++..-..
T Consensus       303 ~~~~-~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs  368 (431)
T PRK14903        303 YVQD-TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT  368 (431)
T ss_pred             hhhc-cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence            2223 699997 4  44331                         1366788899997 987665443

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=93.80  E-value=1.2  Score=36.12  Aligned_cols=81  Identities=28%  Similarity=0.291  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ++++|.|+|-|.-|.+.++-+|-.|. +|++..+... ..+.+++-|.. +        .+..+.++      ..|+|+-
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~-v--------~~~~eAv~------~aDvV~~   66 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFE-V--------MSVAEAVK------KADVVML   66 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-E-C--------CEHHHHHH------C-SEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCe-e--------ccHHHHHh------hCCEEEE
Confidence            57899999999999999999999999 8887777666 77788888864 2        22444444      5799998


Q ss_pred             cCCCh---HHH-HHHHHhhccC
Q 019822          229 CTGVP---SLL-SEALETTKVG  246 (335)
Q Consensus       229 ~~g~~---~~~-~~~~~~l~~~  246 (335)
                      .+...   +.+ +.+...|+++
T Consensus        67 L~PD~~q~~vy~~~I~p~l~~G   88 (165)
T PF07991_consen   67 LLPDEVQPEVYEEEIAPNLKPG   88 (165)
T ss_dssp             -S-HHHHHHHHHHHHHHHS-TT
T ss_pred             eCChHHHHHHHHHHHHhhCCCC
Confidence            87643   233 4555677775

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2

Probab=93.78  E-value=1.4  Score=38.79  Aligned_cols=34  Identities=32%  Similarity=0.408  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK  183 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~  183 (335)
                      -++.+|+|.|.|.+|+.+++++..+|+ +|++++.
T Consensus        36 l~g~~vaIqGfGnVG~~~a~~L~e~Ga-kvvaVsD   69 (254)
T cd05313          36 LKGKRVAISGSGNVAQYAAEKLLELGA-KVVTLSD   69 (254)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence            467899999999999999999999999 8887753

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t

>PRK06701 short chain dehydrogenase; Provisional

Probab=93.76  E-value=0.35  Score=43.40  Aligned_cols=38  Identities=18%  Similarity=0.095  Sum_probs=31.8

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          147 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       147 ~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+++++||+|+ |.+|..++..+...|+ +|+.+.++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~   80 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDE   80 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence            3445789999987 9999999998888899 898888764

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=93.75  E-value=0.69  Score=41.50  Aligned_cols=107  Identities=13%  Similarity=0.078  Sum_probs=71.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc---C-C-ceEeCCCCCCchh---HHHHHHhhhC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF---G-M-TDFINPDDEPNKS---ISELVKGITH  219 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l---g-a-~~v~~~~~~~~~~---~~~~i~~~~~  219 (335)
                      .+++.|||+|+ ++.|..++.-+...|. .|++.+-.++..+.++..   + . +-.+|-.+  +++   ..+.+++..+
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~--~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK--PESVKEAAQWVKKHLG  103 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCC--HHHHHHHHHHHHHhcc
Confidence            45677999998 9999999999999999 999999777765655332   1 1 11234332  122   3445556666


Q ss_pred             CCCccEEEEcCCCh--------------------------HHHHHHHHhhccCCeEEEEEccCCC
Q 019822          220 GMGVDYCFECTGVP--------------------------SLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       220 g~g~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      ..+.--++|+.|-.                          ......+..+++..||+|-++...+
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G  168 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG  168 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence            66788888888721                          1223445566655599999987776

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=93.73  E-value=0.43  Score=42.58  Aligned_cols=132  Identities=23%  Similarity=0.301  Sum_probs=85.8

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCC--------chhHHHHHHhh
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP--------NKSISELVKGI  217 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~--------~~~~~~~i~~~  217 (335)
                      ++..++..+|++|.|..|++++..++..|+ -|...+-...+.+..+.+|++-+--.+++.        +.+|.+.-.++
T Consensus       159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~  237 (356)
T COG3288         159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL  237 (356)
T ss_pred             cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence            345677889999999999999999999999 888888888887777777754321111111        23443333332


Q ss_pred             h--CCCCccEEEEcC---CC--hHH-HHHHHHhhccCCeEEEEEccCCCccccch--hHHHhhcCcEEEEee
Q 019822          218 T--HGMGVDYCFECT---GV--PSL-LSEALETTKVGKGKVIVIGVGVDAMVPLN--VIALACGGRTLKGTT  279 (335)
Q Consensus       218 ~--~g~g~d~vid~~---g~--~~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~--~~~~~~~~~~~~g~~  279 (335)
                      .  .-+++|+||-+.   |.  |.+ .......++++ ..+|++....+...+..  -.-....+++|.|..
T Consensus       238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~  308 (356)
T COG3288         238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT  308 (356)
T ss_pred             HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence            2  224799999765   22  222 34677889997 99999976555222222  122344678888765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	335
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		2e-51
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		2e-51
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		6e-45
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		6e-45
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		1e-44
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		2e-44
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		2e-44
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		2e-44
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		2e-44
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		2e-44
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		2e-44
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		3e-44
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-42
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		3e-42
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		7e-42
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		1e-41
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		1e-41
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		1e-41
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		1e-41
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		1e-41
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		2e-41
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		2e-41
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		2e-41
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		4e-41
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		6e-40
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		6e-40
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		6e-40
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		3e-39
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		4e-39
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		2e-38
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		3e-36
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		1e-15
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		5e-09
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-08
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		3e-08
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		3e-08
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		5e-08
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		9e-07
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		2e-06
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		4e-06
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		1e-05
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		2e-04
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		8e-04

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/331 (36%), Positives = 176/331 (53%), Gaps = 14/331 (4%)
Query: 9   SFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMT 68
           +++ KD + LF  V  G + +G +VES G+ V EV+ GD VIP Y  EC+EC+ C S  T
Sbjct: 70  TWSGKDPEGLFPCVL-GHEAAG-IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKT 127
Query: 69  NLCLKYPIALN-GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 126
           NLC K   A   G+M+ D  SR S+ G+ +YH    ST+S+Y V+    V K+DP     
Sbjct: 128 NLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLE 187
Query: 127 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 186
               L CG  TG GA W  AKVE                     +  GA++IIGID +  
Sbjct: 188 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSK 247
Query: 187 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXX 246
           K ++ K FG+T+FINP  E  + I +++  +T G GVDY FEC G  S++  ALE     
Sbjct: 248 KFDRAKNFGVTEFINPK-EHEQPIQQVIVDLTDG-GVDYSFECIGNVSVMRSALECCHKG 305
Query: 247 XXXXXXXXXXXDAM----VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 302
                              P  ++     GR  KGT FGG K++S +P+L+DK   KE K
Sbjct: 306 WGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSRSQVPSLVDKYLKKEIK 361
Query: 303 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 333
           + + +TH++ L +I+KA  L+   DC++V++
Sbjct: 362 VDEYITHNMTLADINKAFDLMHDGDCLRVVL 392

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/331 (36%), Positives = 175/331 (52%), Gaps = 14/331 (4%)
Query: 9   SFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMT 68
           +++ KD + LF  +  G + +G +VES G+ V EV+ GD VIP Y  EC+EC+ C S  T
Sbjct: 52  TWSGKDPEGLFPCIL-GHEAAG-IVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKT 109
Query: 69  NLCLKYPIALN-GLML-DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS 126
           NLC K   A   G+M+ D  SR SV G+ +YH    ST+S+Y V+    V K+DP+    
Sbjct: 110 NLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLD 169
Query: 127 DASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPW 186
               L CG  TG GA W  AKVE                     +  GA++IIGID +  
Sbjct: 170 KVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSK 229
Query: 187 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXX 246
           K E  K FG+ +F+NP D  +K I E++  +T G GVDY FEC G  S++  ALE     
Sbjct: 230 KYETAKKFGVNEFVNPKDH-DKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKG 287
Query: 247 XXXXXXXXXXXDAM----VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 302
                              P  ++     GR  KGT FGG K+++ +P L++K  NKE K
Sbjct: 288 WGTSVIVGVAASGQEISTRPFQLVT----GRVWKGTAFGGFKSRTQVPWLVEKYMNKEIK 343
Query: 303 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 333
           + + +TH++ L EI+KA  LL +  C++ ++
Sbjct: 344 VDEYITHNLTLGEINKAFDLLHEGTCLRCVL 374

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  177 bits (450), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/325 (34%), Positives = 166/325 (51%), Gaps = 13/325 (4%)
Query: 16  QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC---- 71
           + LF +V  G + +G +VES G  V   K GD VIP +  +CK C+ C S +TNLC    
Sbjct: 58  KALFPVVL-GHECAG-IVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLR 115
Query: 72  -LKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF 130
             KYP     LM D TSR + +G+ +YH    S++S+Y V+    + +VD   +      
Sbjct: 116 NFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCL 175
Query: 131 LSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEK 190
           + CGF++GYGAA   AKV                      ++ GA++II ID N  K  K
Sbjct: 176 IGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPK 235
Query: 191 GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXX 250
            KA G TD +NP  E +K + +++  +T G GVDY  +C G    L  A++ T       
Sbjct: 236 AKALGATDCLNP-RELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSC 293
Query: 251 XXXXXXXDAM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTH 309
                  D M +P   + L   GR++ GT FGG K+   +P L+   KNK+F L  L+TH
Sbjct: 294 TVVGAKVDEMTIPTVDVIL---GRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTH 350
Query: 310 HVKLEEIDKAIQLLKQPDCVKVLIT 334
            +  E I+ AI L+K+   ++ ++T
Sbjct: 351 ALPFESINDAIDLMKEGKSIRTILT 375

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  177 bits (450), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/325 (34%), Positives = 166/325 (51%), Gaps = 13/325 (4%)
Query: 16  QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC---- 71
           + LF +V  G + +G +VES G  V   K GD VIP +  +CK C+ C S +TNLC    
Sbjct: 58  KALFPVVL-GHECAG-IVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLR 115
Query: 72  -LKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF 130
             KYP     LM D TSR + +G+ +YH    S++S+Y V+    + +VD   +      
Sbjct: 116 NFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCL 175
Query: 131 LSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEK 190
           + CGF++GYGAA   AKV                      ++ GA++II ID N  K  K
Sbjct: 176 IGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPK 235
Query: 191 GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXX 250
            KA G TD +NP  E +K + +++  +T G GVDY  +C G    L  A++ T       
Sbjct: 236 AKALGATDCLNP-RELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSC 293
Query: 251 XXXXXXXDAM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTH 309
                  D M +P   + L   GR++ GT FGG K+   +P L+   KNK+F L  L+TH
Sbjct: 294 TVVGAKVDEMTIPTVDVIL---GRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTH 350
Query: 310 HVKLEEIDKAIQLLKQPDCVKVLIT 334
            +  E I+ AI L+K+   ++ ++T
Sbjct: 351 ALPFESINDAIDLMKEGKSIRTILT 375

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 160/309 (51%), Gaps = 11/309 (3%)
Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLMLDSTSRMS 90
           +VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GLM D TSR +
Sbjct: 72  IVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT 131
Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            +G+ + H    ST+SEY V+    V K+DP         L CG +TGYGAA   AK+E 
Sbjct: 132 CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEP 191
Query: 151 XXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
                               ++ GA++IIG+D N  K  + K FG T+ INP D  +K I
Sbjct: 192 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SKPI 250
Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----AMVPLNVI 266
            E++  +T G GVDY FEC G   ++  ALE                     A  P  ++
Sbjct: 251 QEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLV 309
Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 326
                GRT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +EI+KA +L+   
Sbjct: 310 T----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSG 365
Query: 327 DCVKVLITI 335
             ++ ++ I
Sbjct: 366 KSIRTVVKI 374

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 160/308 (51%), Gaps = 10/308 (3%)
Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLK-YPIALNGLMLDSTSRMS 90
           +VES G  V E + G+ VIP +I +C EC  C S  TN C+K +      +M    +R +
Sbjct: 73  IVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFT 132
Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            +G+K+      ST+S+Y V++   V K+DPS        L CG +TG+GAA   AKVE 
Sbjct: 133 CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEP 192
Query: 151 XXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
                                  GA +II +D NP K EK K FG TDF+NP+D  ++ I
Sbjct: 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDH-SEPI 251
Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTXX---XXXXXXXXXXXXDAMVPLNVIA 267
           S+++  +T+G GVD+  EC G   ++  ALE+                   A  P+ +IA
Sbjct: 252 SQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIA 310
Query: 268 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
               GRT KG+ FGG K K  +P ++    +K+ KL + +TH + LE ++ AI L+K   
Sbjct: 311 ----GRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGK 366
Query: 328 CVKVLITI 335
           C++ ++++
Sbjct: 367 CIRTVLSL 374

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 160/309 (51%), Gaps = 11/309 (3%)
Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLMLDSTSRMS 90
           +VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GLM D TSR +
Sbjct: 71  IVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT 130
Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            +G+ + H    ST+SEY V+    V K+DP         L CG +TGYGAA   AK+E 
Sbjct: 131 CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEP 190
Query: 151 XXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
                               ++ GA++IIG+D N  K  + K FG T+ INP D  +K I
Sbjct: 191 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SKPI 249
Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----AMVPLNVI 266
            E++  +T G GVDY FEC G   ++  ALE                     A  P  ++
Sbjct: 250 QEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLV 308
Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 326
                GRT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +EI+KA +L+   
Sbjct: 309 T----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSG 364
Query: 327 DCVKVLITI 335
             ++ ++ I
Sbjct: 365 KSIRTVVKI 373

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 160/309 (51%), Gaps = 11/309 (3%)
Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLMLDSTSRMS 90
           +VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GLM D TSR +
Sbjct: 71  IVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT 130
Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            +G+ + H    ST+SEY V+    V K+DP         L CG +TGYGAA   AK+E 
Sbjct: 131 CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEP 190
Query: 151 XXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
                               ++ GA++IIG+D N  K  + K FG T+ INP D  +K I
Sbjct: 191 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SKPI 249
Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----AMVPLNVI 266
            E++  +T G GVDY FEC G   ++  ALE                     A  P  ++
Sbjct: 250 QEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLV 308
Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 326
                GRT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +EI+KA +L+   
Sbjct: 309 T----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSG 364
Query: 327 DCVKVLITI 335
             ++ ++ I
Sbjct: 365 KSIRTVVKI 373

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 160/309 (51%), Gaps = 11/309 (3%)
Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLMLDSTSRMS 90
           +VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GLM D TSR +
Sbjct: 72  IVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT 131
Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            +G+ + H    ST+SEY V+    V K+DP         L CG +TGYGAA   AK+E 
Sbjct: 132 CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEP 191
Query: 151 XXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
                               ++ GA++IIG+D N  K  + K FG T+ INP D  +K I
Sbjct: 192 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SKPI 250
Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD----AMVPLNVI 266
            E++  +T G GVDY FEC G   ++  ALE                     A  P  ++
Sbjct: 251 QEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLV 309
Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 326
                GRT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +EI+KA +L+   
Sbjct: 310 T----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSG 365
Query: 327 DCVKVLITI 335
             ++ ++ I
Sbjct: 366 KSIRTVVKI 374

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  176 bits (445), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 164/313 (52%), Gaps = 3/313 (0%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 81
           V  G + +G +VES G+ V  VK GD VIP ++ +C+EC  C +   NLC++  I   G+
Sbjct: 63  VIVGHEATG-IVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGV 121
Query: 82  MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 141
           + D T+R + +G+ ++H  + ST++EY V+D + V K+D +  P     + CGF+TGYGA
Sbjct: 122 LADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGA 181
Query: 142 AWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 201
           A K  KV+                     +  GA++IIGID N  K EK  A G T+ I+
Sbjct: 182 AVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECIS 241
Query: 202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMV 261
           P D   K ISE++  +T G  V Y FE  G    + +AL +                A +
Sbjct: 242 PKDS-TKPISEVLSEMT-GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKM 299
Query: 262 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321
                 L   GRT KG  FGG+K++ D+P L+ +   K+F L QL+TH +  ++I +  +
Sbjct: 300 LTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFE 359
Query: 322 LLKQPDCVKVLIT 334
           LL     ++ ++T
Sbjct: 360 LLNSGQSIRTVLT 372

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  176 bits (445), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 164/313 (52%), Gaps = 3/313 (0%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 81
           V  G + +G +VES G+ V  VK GD VIP ++ +C+EC  C +   NLC++  I   G+
Sbjct: 63  VIVGHEATG-IVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGV 121
Query: 82  MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 141
           + D T+R + +G+ ++H  + ST++EY V+D + V K+D +  P     + CGF+TGYGA
Sbjct: 122 LADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGA 181
Query: 142 AWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 201
           A K  KV+                     +  GA++IIGID N  K EK  A G T+ I+
Sbjct: 182 AVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECIS 241
Query: 202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMV 261
           P D   K ISE++  +T G  V Y FE  G    + +AL +                A +
Sbjct: 242 PKDS-TKPISEVLSEMT-GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKM 299
Query: 262 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ 321
                 L   GRT KG  FGG+K++ D+P L+ +   K+F L QL+TH +  ++I +  +
Sbjct: 300 LTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGFE 359
Query: 322 LLKQPDCVKVLIT 334
           LL     ++ ++T
Sbjct: 360 LLNSGQSIRTVLT 372

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  175 bits (444), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/327 (34%), Positives = 164/327 (50%), Gaps = 16/327 (4%)
Query: 16  QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLC---- 71
           + L   V  G + +G +VES G  V  VK GD VIP Y   C++C+ C S +TNLC    
Sbjct: 60  EGLAFPVIVGHEAAG-IVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKIS 118
Query: 72  -LKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF 130
            LK P +   LM D TSR + +G+ +YH F  ST+S+Y V+    + K+D   +      
Sbjct: 119 NLKSPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCL 178
Query: 131 LSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEK 190
           L CGF+TGYGAA   AKV                      +  GA++IIGID N  K  K
Sbjct: 179 LGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVK 238
Query: 191 GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXX 250
            KA G TD +NP D  +K I E++  +T G GVD+  +C G    +  AL+ T       
Sbjct: 239 AKALGATDCLNPRDL-HKPIQEVIIELTKG-GVDFALDCAGGSETMKAALDCTTAGWGSC 296
Query: 251 XXXXXXXDA----MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQL 306
                   +    + P  +I     GRT+ GT FGG K+   +P L+   KNK+F L  L
Sbjct: 297 TFIGVAAGSKGLTVFPEELII----GRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDAL 352
Query: 307 LTHHVKLEEIDKAIQLLKQPDCVKVLI 333
           +TH +  ++I +A  L+ Q   ++ ++
Sbjct: 353 VTHTLPFDKISEAFDLMNQGKSIRTIL 379

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  169 bits (427), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 160/317 (50%), Gaps = 11/317 (3%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 81
           V +G + +G +VES G+ V  V+ GD VIP +I +C +C  C     NLCLK      G 
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGT 121
Query: 82  MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 141
           M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+
Sbjct: 122 MQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGS 181
Query: 142 AWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 201
           A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +N
Sbjct: 182 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 241
Query: 202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD--- 258
           P D   K I E++  +++G GVD+ FE  G    +  AL                 D   
Sbjct: 242 PQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQN 299
Query: 259 -AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317
            +M P+ +++    GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I+
Sbjct: 300 LSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 355
Query: 318 KAIQLLKQPDCVKVLIT 334
           +   LL+    ++ ++T
Sbjct: 356 EGFDLLRSGKSIRTILT 372

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  169 bits (427), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 160/317 (50%), Gaps = 11/317 (3%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGL 81
           V +G + +G +VES G+ V  V+ GD VIP +I +C +C  C     NLCLK      G 
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGT 121
Query: 82  MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA 141
           M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+
Sbjct: 122 MQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGS 181
Query: 142 AWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN 201
           A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +N
Sbjct: 182 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 241
Query: 202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD--- 258
           P D   K I E++  +++G GVD+ FE  G    +  AL                 D   
Sbjct: 242 PQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQN 299
Query: 259 -AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317
            +M P+ +++    GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I+
Sbjct: 300 LSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 355
Query: 318 KAIQLLKQPDCVKVLIT 334
           +   LL+    ++ ++T
Sbjct: 356 EGFDLLRSGKSIRTILT 372

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  167 bits (423), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 162/318 (50%), Gaps = 12/318 (3%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NG 80
           V +G + +G +VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD-- 258
           NP D   K I E++  +++G GVD+ FE  G    +  AL                 D  
Sbjct: 242 NPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQ 299
Query: 259 --AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316
             +M P+ +++    GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 300 NLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKI 355
Query: 317 DKAIQLLKQPDCVKVLIT 334
           ++   LL+  + ++ ++T
Sbjct: 356 NEGFDLLRSGESIRTILT 373

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 162/318 (50%), Gaps = 12/318 (3%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NG 80
           V +G + +G +VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD-- 258
           NP D   K I E++  +++G GVD+ FE  G    +  AL                 D  
Sbjct: 242 NPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 259 --AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316
             +M P+ +++    GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 300 NLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKI 355
Query: 317 DKAIQLLKQPDCVKVLIT 334
           ++   LL+  + ++ ++T
Sbjct: 356 NEGFDLLRSGESIRTILT 373

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 162/318 (50%), Gaps = 12/318 (3%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NG 80
           V +G + +G +VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD-- 258
           NP D   K I E++  +++G GVD+ FE  G    +  AL                 D  
Sbjct: 242 NPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQ 299
Query: 259 --AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316
             +M P+ +++    GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 300 NLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKI 355
Query: 317 DKAIQLLKQPDCVKVLIT 334
           ++   LL+  + ++ ++T
Sbjct: 356 NEGFDLLRSGESIRTILT 373

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 162/318 (50%), Gaps = 12/318 (3%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NG 80
           V +G + +G +VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD-- 258
           NP D   K I E++  +++G GVD+ FE  G    +  AL                 D  
Sbjct: 242 NPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 259 --AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316
             +M P+ +++    GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 300 NLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKI 355
Query: 317 DKAIQLLKQPDCVKVLIT 334
           ++   LL+  + ++ ++T
Sbjct: 356 NEGFDLLRSGESIRTILT 373

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 162/318 (50%), Gaps = 12/318 (3%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NG 80
           V +G + +G +VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD-- 258
           NP D   K I E++  +++G GVD+ FE  G    +  AL                 D  
Sbjct: 242 NPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQ 299
Query: 259 --AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316
             +M P+ +++    GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 300 NLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKI 355
Query: 317 DKAIQLLKQPDCVKVLIT 334
           ++   LL+  + ++ ++T
Sbjct: 356 NEGFDLLRSGESIRTILT 373

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  166 bits (421), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 162/318 (50%), Gaps = 12/318 (3%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NG 80
           V +G + +G +VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD-- 258
           NP D   K I E++  +++G GVD+ FE  G    +  AL                 D  
Sbjct: 242 NPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 259 --AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316
             +M P+ +++    GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 300 NLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKI 355
Query: 317 DKAIQLLKQPDCVKVLIT 334
           ++   LL+  + ++ ++T
Sbjct: 356 NEGFDLLRSGESIRTILT 373

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  166 bits (420), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 161/315 (51%), Gaps = 6/315 (1%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NG 80
           V +G + +G +VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM 260
           NP D   K I E++  +++G GVD+ FE  G    +  AL                 D+ 
Sbjct: 242 NPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 261 -VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 319
            + +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++ 
Sbjct: 300 NLSMNPMLLL-SGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEG 358
Query: 320 IQLLKQPDCVKVLIT 334
             LL+  + ++ ++T
Sbjct: 359 FDLLRSGESIRTILT 373

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  166 bits (420), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 161/315 (51%), Gaps = 6/315 (1%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NG 80
           V +G + +G +VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAM 260
           NP D   K I E++  +++G GVD+ FE  G    +  AL                 D+ 
Sbjct: 242 NPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 261 -VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 319
            + +N + L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++ 
Sbjct: 300 NLSMNPMLLL-SGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEG 358
Query: 320 IQLLKQPDCVKVLIT 334
             LL+  + ++ ++T
Sbjct: 359 FDLLRSGESIRTILT 373

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  166 bits (420), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 162/318 (50%), Gaps = 12/318 (3%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NG 80
           V +G + +G +VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A K AKV +                    +  GAA+IIG+D N  +  K K  G T+ +
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECV 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD-- 258
           NP D   K I E++  +++G GVD+ FE  G    +  AL                 D  
Sbjct: 242 NPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 259 --AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316
             +M P+ +++    GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 300 NLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKI 355
Query: 317 DKAIQLLKQPDCVKVLIT 334
           ++   LL+  + ++ ++T
Sbjct: 356 NEGFDLLRSGESIRTILT 373

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  165 bits (417), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 161/318 (50%), Gaps = 12/318 (3%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NG 80
           V +G + +G +VES G+ V  V+ GD VIP    +C +C  C     N CLK  +++  G
Sbjct: 63  VIAGHEAAG-IVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            M D TSR + RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A K AKV +                    +  GAA+IIG+D N  K  K K  G T+ +
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXD-- 258
           NP D   K I E++  +++G GVD+ FE  G    +  AL                 D  
Sbjct: 242 NPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299
Query: 259 --AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI 316
             +M P+ +++    GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I
Sbjct: 300 NLSMNPMLLLS----GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKI 355
Query: 317 DKAIQLLKQPDCVKVLIT 334
           ++   LL+  + ++ ++T
Sbjct: 356 NEGFDLLRSGESIRTILT 373

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  161 bits (407), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 157/321 (48%), Gaps = 18/321 (5%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNG 80
           V  G + +G +VES G+ V  VK GD VIP +  +C +C  C +  +N CLK  +    G
Sbjct: 63  VILGHEAAG-IVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            + D T R + RG+ ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A   AKV                      +  GAA+II +D N  K  K K  G T+ I
Sbjct: 182 SAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXX 253
           NP D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+          
Sbjct: 242 NPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 254 XXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL 313
               + M+ L        GRT KG  +GG K+K  +P L+     K+F L  L+TH +  
Sbjct: 300 NLSINPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF 352
Query: 314 EEIDKAIQLLKQPDCVKVLIT 334
           E+I++   LL     ++ ++T
Sbjct: 353 EKINEGFDLLHSGKSIRTVLT 373

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  161 bits (407), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 157/321 (48%), Gaps = 18/321 (5%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNG 80
           V  G + +G +VES G+ V  VK GD VIP +  +C +C  C +  +N CLK  +    G
Sbjct: 63  VILGHEAAG-IVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            + D T R + RG+ ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A   AKV                      +  GAA+II +D N  K  K K  G T+ I
Sbjct: 182 SAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXX 253
           NP D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+          
Sbjct: 242 NPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 254 XXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL 313
               + M+ L        GRT KG  +GG K+K  +P L+     K+F L  L+TH +  
Sbjct: 300 NLSINPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF 352
Query: 314 EEIDKAIQLLKQPDCVKVLIT 334
           E+I++   LL     ++ ++T
Sbjct: 353 EKINEGFDLLHSGKSIRTVLT 373

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  161 bits (407), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 157/321 (48%), Gaps = 18/321 (5%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNG 80
           V  G + +G +VES G+ V  VK GD VIP +  +C +C  C +  +N CLK  +    G
Sbjct: 63  VILGHEAAG-IVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            + D T R + RG+ ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A   AKV                      +  GAA+II +D N  K  K K  G T+ I
Sbjct: 182 SAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXX 253
           NP D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+          
Sbjct: 242 NPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 254 XXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL 313
               + M+ L        GRT KG  +GG K+K  +P L+     K+F L  L+TH +  
Sbjct: 300 NLSINPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF 352
Query: 314 EEIDKAIQLLKQPDCVKVLIT 334
           E+I++   LL     ++ ++T
Sbjct: 353 EKINEGFDLLHSGKSIRTVLT 373

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 156/321 (48%), Gaps = 18/321 (5%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNG 80
           V  G + +G +VES G+ V  VK GD VIP +  +C +C  C +  +N CLK  +    G
Sbjct: 63  VILGHEAAG-IVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            + D T R + RG+ ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG
Sbjct: 122 TLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A   AKV                      +  GAA+II +D N  K  K K  G T+ I
Sbjct: 182 SAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXX 253
           NP D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+          
Sbjct: 242 NPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQ 299
Query: 254 XXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL 313
               + M+ L        GRT KG  +GG K+K  +P L+     K+F L  L+TH +  
Sbjct: 300 NLSINPMLLLT-------GRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF 352
Query: 314 EEIDKAIQLLKQPDCVKVLIT 334
           E+I++   LL     +  ++T
Sbjct: 353 EKINEGFDLLHSGKSICTVLT 373

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  158 bits (400), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 158/321 (49%), Gaps = 18/321 (5%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNG 80
           V  G + +G +VES G+ V  VK GD VIP +  +C +C  C +  +N CLK  +    G
Sbjct: 63  VILGHEAAG-IVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            + D T R +  G+ ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG
Sbjct: 122 TLQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A K AKV                      +  GAA+II +D N  K  K K  G T+ I
Sbjct: 182 SAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECI 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXX 253
           NP D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+          
Sbjct: 242 NPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQ 299
Query: 254 XXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL 313
               + M+ L        GRT KG  FGG K+K  +P L+     K+F L  L+T+ +  
Sbjct: 300 NLSINPMLLLT-------GRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPF 352
Query: 314 EEIDKAIQLLKQPDCVKVLIT 334
           E+I++   LL+    ++ ++T
Sbjct: 353 EKINEGFDLLRSGKSIRTVLT 373

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 156/320 (48%), Gaps = 18/320 (5%)
Query: 22  VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNG 80
           V  G + +G +VES G+ V  VK GD VIP  I +C +C  C +  +N CLK  ++   G
Sbjct: 63  VILGHEAAG-IVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQG 121
Query: 81  LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG 140
            + D TSR + R + ++H    ST+S+Y V+D N V K+D +        + CGF+TGYG
Sbjct: 122 TLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYG 181
Query: 141 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
           +A   AKV                      +  GAA+II +D N  K  K K  G T+ I
Sbjct: 182 SAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECI 241
Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTG-----VPSLL--SEALETTXXXXXXXXXX 253
           NP D   K I E++K +T G GVD+ FE  G     + SLL   EA  T+          
Sbjct: 242 NPQDY-KKPIQEVLKEMTDG-GVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQ 299
Query: 254 XXXXDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL 313
               + M+ L        GRT KG   GG K+K  +P L+     K+F L  L+TH +  
Sbjct: 300 NLSMNPMLLLT-------GRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPF 352
Query: 314 EEIDKAIQLLKQPDCVKVLI 333
           E+I++   LL     ++ ++
Sbjct: 353 EKINEGFDLLHSGKSIRTIL 372

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  149 bits (375), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 151/303 (49%), Gaps = 5/303 (1%)
Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI-ALNGLMLDSTSRMS 90
           VVES G  V  VK GD VIP ++ +C  C  C S  +N C K  + A  GLM D TSR +
Sbjct: 73  VVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT 132
Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            RG+ +Y++   ST++EY V+    V K+DP   P ++  + CGF TGYGAA   AKV  
Sbjct: 133 CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKA-PLESCLIGCGFATGYGAAVNTAKVTP 191
Query: 151 XXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
                               +  GA++IIG+  +  K  K    G T+ +NP D  +K I
Sbjct: 192 GSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY-DKPI 250
Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVIALAC 270
            E++   T+G GVDY  EC G    +  AL++T                        L  
Sbjct: 251 YEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLL 309
Query: 271 GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVK 330
            GR+LKG+ FGG K + ++  L+D    K+  ++ L++  + L++I+KA +LL     V+
Sbjct: 310 TGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVR 368
Query: 331 VLI 333
            ++
Sbjct: 369 SIM 371

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 118/293 (40%), Gaps = 13/293 (4%)
Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           ++E+ G  V E++ GD V+ +Y G C +C  C +     C ++    N    DS    ++
Sbjct: 70  IIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEF-FGRNFSGADSEGNHAL 127
Query: 92  ----RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK 147
               +G    H F+ S+++ Y +   N  VKV   +       L CG  TG GA     K
Sbjct: 128 CTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALK 187
Query: 148 VEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD-DEP 206
           V                      ++ GA+ II +D    + E  K  G T  IN    +P
Sbjct: 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDP 247
Query: 207 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVPLNVI 266
             +I E+  G     GV++  E TG P +L + ++                      +V 
Sbjct: 248 VAAIKEITDG-----GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVN 302
Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 319
            L  GG+T+ G   G    K  +P L+   +  +F   QL+  +   +EI++A
Sbjct: 303 DLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKFYA-FDEINQA 354

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 140/338 (41%), Gaps = 37/338 (10%)
Query: 6   TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGD-IVIPTYIGECKECENCT 64
           T+   AL D + + +    G +  G+VVE  G EVK+ K GD +++P    + +  E   
Sbjct: 43  TVFEGALGDRKNMIL----GHEAVGEVVE-VGSEVKDFKPGDRVIVPCTTPDWRSLE--- 94
Query: 65  SEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYM-VIDANYVVKVDPSI 123
                +   +P   NG++          G K  + F    + EY  V DA+  + + P  
Sbjct: 95  -----VQAGFPQHSNGML---------AGWKFSN-FKDGVFGEYFHVNDADMNLAILPKD 139
Query: 124 DP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGID 182
            P  +A  ++   TTG+  A + A ++                     ++ GA +IIG+ 
Sbjct: 140 MPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVG 198
Query: 183 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242
             P   E  K +G TD +N     N  I + V  +T+G GVD      G    LS+A+  
Sbjct: 199 SRPICVEAAKFYGATDILN---YKNGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSM 255
Query: 243 TXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKTKSDLPTLLDKCKNKE 300
                             + +  +   CG   +T+KG    G + ++++  L D      
Sbjct: 256 VKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAEM--LRDMVVYNR 313
Query: 301 FKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVKVLITI 335
             L +L+TH +   + I++A+ L+K    D +K ++ +
Sbjct: 314 VDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIKAVVIL 351

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 140/338 (41%), Gaps = 37/338 (10%)
Query: 6   TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGD-IVIPTYIGECKECENCT 64
           T+   AL D + + +    G +  G+VVE  G EVK+ K GD +++P    + +  E   
Sbjct: 43  TVFEGALGDRKNMIL----GHEAVGEVVE-VGSEVKDFKPGDRVIVPCTTPDWRSLE--- 94
Query: 65  SEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYM-VIDANYVVKVDPSI 123
                +   +    NG++          G K  + F    + EY  V DA+  + + P  
Sbjct: 95  -----VQAGFQQHSNGML---------AGWKFSN-FKDGVFGEYFHVNDADMNLAILPKD 139
Query: 124 DP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGID 182
            P  +A  ++   TTG+  A + A +E                     ++ GA +II + 
Sbjct: 140 MPLENAVMITDMMTTGFHGA-ELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVG 198
Query: 183 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242
             P   +  K +G TD +N  D P   I   +  +T G GVD      G   +++ A++ 
Sbjct: 199 SRPVCVDAAKYYGATDIVNYKDGP---IESQIMNLTEGKGVDAAIIAGGNADIMATAVKI 255
Query: 243 TXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKTKSDLPTLLDKCKNKE 300
                            ++P+  +   CG   +T+KG    G + ++++  L D      
Sbjct: 256 VKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLRAEM--LRDMVVYNR 313
Query: 301 FKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVKVLITI 335
             L +L+TH +   + I++A+ L+K    D +K ++ +
Sbjct: 314 VDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIKAVVIL 351

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 139/338 (41%), Gaps = 37/338 (10%)
Query: 6   TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGD-IVIPTYIGECKECENCT 64
           T+   AL D + + +    G +  G+VVE  G EVK+ K GD +++P    + +  E   
Sbjct: 43  TVFEGALGDRKNMIL----GHEAVGEVVE-VGSEVKDFKPGDRVIVPCTTPDWRSLE--- 94
Query: 65  SEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYM-VIDANYVVKVDPSI 123
                +   +    NG++          G K  + F    + EY  V DA+  + + P  
Sbjct: 95  -----VQAGFQQHSNGML---------AGWKFSN-FKDGVFGEYFHVNDADMNLAILPKD 139
Query: 124 DP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGID 182
            P  +A  ++   TTG+  A + A +E                     ++ GA +IIG+ 
Sbjct: 140 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVG 198
Query: 183 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242
             P   E  K +G TD +N     N  I + V  +T+G GVD      G    LS+A++ 
Sbjct: 199 SRPICVEAAKFYGATDILN---YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKM 255
Query: 243 TXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKTKSDLPTLLDKCKNKE 300
                             + +  +   CG   +T+KG    G + +++   L D      
Sbjct: 256 VKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE--RLRDMVVYNR 313
Query: 301 FKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVKVLITI 335
             L +L+TH +   + I++A+ L+K    D +K ++ +
Sbjct: 314 VDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIKAVVIL 351

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 131/331 (39%), Gaps = 30/331 (9%)
Query: 14  DSQRLFILVFSGTKVSGKVVESAGDEV----KEVKEGDIVIPTYIGECKECENC-TSEMT 68
           +  R+ + +  G + +G+VVE  G++     + +K GD+++      C EC  C  S+  
Sbjct: 65  EDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEP 124
Query: 69  NLCLKYPI-ALNGLMLDSTSRMSVRGQKLY-HIFSCSTWSEYMVIDANY-VVKVDPSIDP 125
            LC    +  +N            RG   Y H+  C  +S ++V+D    V+KV    D 
Sbjct: 125 YLCPNRKVYGIN------------RGCSEYPHLRGC--YSSHIVLDPETDVLKVSEKDDL 170
Query: 126 SDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNP 185
              +   C   T Y A  +  +                       R  GA  +I I  +P
Sbjct: 171 DVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSP 230
Query: 186 WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXX 245
            + +  +  G    +N  +   +   + +  ITHG G D+  E TG    L E  E    
Sbjct: 231 NRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRR 290
Query: 246 XXXXXXXXXXXXDAMVPLNVIALACGGRTLKGTTFGGI---KTKSDLPTLLDKCKNKEFK 302
                          VP  V         LK  TF GI    T   + T+    +N +  
Sbjct: 291 GGFYSVAGVAVPQDPVPFKVYEWL----VLKNATFKGIWVSDTSHFVKTVSITSRNYQL- 345
Query: 303 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 333
           L +L+TH + L+E +KA++L++  + +KV++
Sbjct: 346 LSKLITHRLPLKEANKALELMESREALKVIL 376

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 139/338 (41%), Gaps = 37/338 (10%)
Query: 6   TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGD-IVIPTYIGECKECENCT 64
           T+   AL D + + +    G +  G+VVE  G EVK+ K GD +++P    + +  E   
Sbjct: 43  TVFEGALGDRKNMIL----GHEAVGEVVE-VGSEVKDFKPGDRVIVPCTTPDWRSLE--- 94
Query: 65  SEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYM-VIDANYVVKVDPSI 123
                +   +    NG++          G K  + F    + EY  V DA+  + + P  
Sbjct: 95  -----VQAGFQQHSNGML---------AGWKFSN-FKDGVFGEYFHVNDADMNLAILPKD 139
Query: 124 DP-SDASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGID 182
            P  +A  ++   TTG+  A + A ++                     ++ GA +IIG+ 
Sbjct: 140 MPLENAVMITDMMTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVG 198
Query: 183 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242
             P   E  K +G TD +N     N  I + V  +T+G GVD      G    LS+A+  
Sbjct: 199 SRPICVEAAKFYGATDILN---YKNGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSM 255
Query: 243 TXXXXXXXXXXXXXXDAMVPLNVIALACG--GRTLKGTTFGGIKTKSDLPTLLDKCKNKE 300
                             + +  +   CG   +T+KG    G + ++++  L D      
Sbjct: 256 VKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAEM--LRDMVVYNR 313
Query: 301 FKLHQLLTH-HVKLEEIDKAIQLLKQ--PDCVKVLITI 335
             L +L+TH +   + I++A+ L+K    D +K ++ +
Sbjct: 314 VDLSKLVTHVYHGFDHIEEALLLMKDKPKDLIKAVVIL 351

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 124/305 (40%), Gaps = 29/305 (9%)
Query: 25  GTKVSGKVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G +  G+VVE  G EVK+ K GD +V+P    + +     TSE+     ++    +G ML
Sbjct: 58  GHEAVGEVVE-VGSEVKDFKPGDRVVVPAITPDWR-----TSEVQRGYHQH----SGGML 107
Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF-TTGYGAA 142
                    G K  ++        + V DA+  +   P   P +A+ +     TTG+  A
Sbjct: 108 --------AGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA 159
Query: 143 WKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 202
            + A +E                     ++ GA +II +   P   +  K +G TD +N 
Sbjct: 160 -ELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNY 218
Query: 203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVP 262
            D P   I   +  +T G GVD      G   +++ A++                  ++P
Sbjct: 219 KDGP---IESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLP 275
Query: 263 LNVIALACG--GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKA 319
           +  +   CG   +T+KG    G + +  +  L+D    K     +L+TH  +  + I+KA
Sbjct: 276 VPRLEWGCGMAHKTIKGGLCPGGRLR--MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKA 333
Query: 320 IQLLK 324
             L+K
Sbjct: 334 FMLMK 338

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 29/305 (9%)
Query: 25  GTKVSGKVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G +  G+VVE  G EVK+ K GD +V+P    + +     TSE+     ++    +G ML
Sbjct: 58  GHEAVGEVVE-VGSEVKDFKPGDRVVVPAITPDWR-----TSEVQRGYHQH----SGGML 107
Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF-TTGYGAA 142
                    G K  ++        + V DA+  +   P   P +A+ +     TTG+  A
Sbjct: 108 --------AGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA 159
Query: 143 WKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 202
            + A +E                     ++ GA +IIG+   P   E  K +G TD +N 
Sbjct: 160 -ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN- 217
Query: 203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVP 262
               N  I + V  +T+G GVD      G    LS+A++                   + 
Sbjct: 218 --YKNGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALL 275
Query: 263 LNVIALACG--GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKA 319
           +  +   CG   +T+KG    G + +  +  L+D    K     +L+TH  +  + I+KA
Sbjct: 276 IPRVEWGCGMAHKTIKGGLCPGGRLR--MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKA 333
Query: 320 IQLLK 324
             L+K
Sbjct: 334 FMLMK 338

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 123/305 (40%), Gaps = 29/305 (9%)
Query: 25  GTKVSGKVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G +  G+VVE  G EVK+ K GD +V+P    + +     TSE+     ++    +G ML
Sbjct: 58  GHEAVGEVVE-VGSEVKDFKPGDRVVVPAITPDWR-----TSEVQRGYHQH----SGGML 107
Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF-TTGYGAA 142
                    G K  ++        + V DA+  +   P   P +A+ +     TTG+  A
Sbjct: 108 --------AGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA 159
Query: 143 WKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 202
            + A ++                     ++ GA +IIG+   P   E  K +G TD +N 
Sbjct: 160 -ELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN- 217
Query: 203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVP 262
               N  I + V  +T+G GVD      G    LS+A+                    + 
Sbjct: 218 --YKNGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALL 275
Query: 263 LNVIALACG--GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKA 319
           +  +   CG   +T+KG    G + +  +  L+D    K     +L+TH  +  + I+KA
Sbjct: 276 IPRVEWGCGMAHKTIKGGLCPGGRLR--MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKA 333
Query: 320 IQLLK 324
             L+K
Sbjct: 334 FMLMK 338

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 123/305 (40%), Gaps = 29/305 (9%)
Query: 25  GTKVSGKVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G +  G+VVE  G EVK+ K GD +V+P    + +     TSE+     ++    +G ML
Sbjct: 58  GHEAVGEVVE-VGSEVKDFKPGDRVVVPAITPDWR-----TSEVQRGYHQH----SGGML 107
Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGF-TTGYGAA 142
                    G K  ++        + V DA+  +   P   P +A+ +     TTG+  A
Sbjct: 108 --------AGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA 159
Query: 143 WKEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 202
            + A +E                     ++ GA +II +   P   +  K +G TD +N 
Sbjct: 160 -ELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNY 218
Query: 203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXXDAMVP 262
            D P   I   +  +T G GVD      G   +++ A++                  ++ 
Sbjct: 219 KDGP---IESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLD 275
Query: 263 LNVIALACG--GRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKA 319
           +  +   CG   +T+KG    G + +  +  L+D    K     +L+TH  +  + I+KA
Sbjct: 276 VPRLEWGCGMAHKTIKGGLCPGGRLR--MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKA 333
Query: 320 IQLLK 324
             L+K
Sbjct: 334 FMLMK 338

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 18/196 (9%)
Query: 25  GTKVSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G ++ G+V E  G +VK+V  GD V +   +G C  CE+C +++ N C K  +    +  
Sbjct: 75  GHEIVGEVTE-VGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYH 133
Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 143
           D T              +   +S +MV +  Y+++   ++     + L C   T Y    
Sbjct: 134 DGT-------------ITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLK 180
Query: 144 KEAKVEKXXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-IN 201
                E                     +  G +K+  I  +P KKE+  K FG   F ++
Sbjct: 181 YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGADSFLVS 239
Query: 202 PDDEPNKSISELVKGI 217
            D E  ++ +  + GI
Sbjct: 240 RDQEQMQAAAGTLDGI 255

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 74/201 (36%), Gaps = 27/201 (13%)
Query: 32  VVESAGDEVKEVKEGDIVIPTYIGE-CKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 90
           +V+  G +V  ++ GD V   +  E C  CE C S     C +             +  S
Sbjct: 65  IVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREV----------KNAGYS 114
Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
           V G            +E  ++ A+Y VKV   +DP +AS ++C   T Y  A K + V+ 
Sbjct: 115 VDG----------GMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTY-KAIKVSGVKP 163
Query: 151 XXXXXXXXXXXXXXXXXXXXRMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD-EPNKS 209
                               +    AK+I +D N  K    K  G    IN  D  P   
Sbjct: 164 GDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIINSGDVNPVDE 223
Query: 210 ISELVKGITHGMGVDYCFECT 230
           I    K IT G+GV     C 
Sbjct: 224 I----KKITGGLGVQSAIVCA 240

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	335
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-132
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	1e-132
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	1e-132
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-129
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-129
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-107
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	3e-91
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	3e-52
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	4e-52
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	7e-50
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-49
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	3e-47
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	7e-47
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-46
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-45
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	9e-45
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	6e-44
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	2e-42
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	2e-40
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	6e-40
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	9e-40
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	2e-39
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	5e-37
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-36
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	7e-31
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	1e-29
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-27
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	8e-25
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	5e-23
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	5e-23
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	5e-22
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	1e-21
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-21
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	4e-21
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	1e-19
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	1e-19
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	2e-19
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	5e-15
3gms_A	340	Putative NADPH:quinone reductase; structural genom	4e-14
4eye_A	342	Probable oxidoreductase; structural genomics, niai	3e-12
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-10
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-10
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	3e-10
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-09
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	5e-09
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-08
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-08
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	9e-08
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-07
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	5e-07
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-06
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-05
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	1e-04

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  381 bits (980), Expect = e-132
 Identities = 115/305 (37%), Positives = 173/305 (56%), Gaps = 5/305 (1%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMS 90
           +VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M D TSR +
Sbjct: 72  IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT 131

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            RG+ ++H    ST+S+Y V+D   V K+D +        + CGF+TGYG+A K AKV +
Sbjct: 132 CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           GS+ AV GLG VGL  + G +  GAA+IIG+D N  K  K K  G T+ +NP D   K I
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPI 250

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVIALA 269
            E++  +++G GVD+ FE  G    +  AL   +   G  +++GV      + +N + L 
Sbjct: 251 QEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLL 309

Query: 270 CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV 329
             GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   LL+  + +
Sbjct: 310 S-GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESI 368

Query: 330 KVLIT 334
           + ++T
Sbjct: 369 RTILT 373

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  380 bits (978), Expect = e-132
 Identities = 120/305 (39%), Positives = 176/305 (57%), Gaps = 4/305 (1%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMS 90
           +VES G  V E + G+ VIP +I +C EC  C S  TN C+K        +M    +R +
Sbjct: 73  IVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFT 132

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            +G+K+      ST+S+Y V++   V K+DPS        L CG +TG+GAA   AKVE 
Sbjct: 133 CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEP 192

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           GS+ AV GLG VGL AV G    GA +II +D NP K EK K FG TDF+NP+D  ++ I
Sbjct: 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDH-SEPI 251

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALAC 270
           S+++  +T+G GVD+  EC G   ++  ALE+   G G  +++G      V    I L  
Sbjct: 252 SQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIA 310

Query: 271 GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVK 330
            GRT KG+ FGG K K  +P ++    +K+ KL + +TH + LE ++ AI L+K   C++
Sbjct: 311 -GRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIR 369

Query: 331 VLITI 335
            ++++
Sbjct: 370 TVLSL 374

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  380 bits (978), Expect = e-132
 Identities = 124/306 (40%), Positives = 177/306 (57%), Gaps = 5/306 (1%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMS 90
           +VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GLM D TSR +
Sbjct: 71  IVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT 130

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            +G+ + H    ST+SEY V+    V K+DP         L CG +TGYGAA   AK+E 
Sbjct: 131 CKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEP 190

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           GS  AV GLG VGL  + G ++ GA++IIG+D N  K  + K FG T+ INP D  +K I
Sbjct: 191 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SKPI 249

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVIALA 269
            E++  +T G GVDY FEC G   ++  ALE    G G  +V+GV      +      L 
Sbjct: 250 QEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLV 308

Query: 270 CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV 329
             GRT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +EI+KA +L+     +
Sbjct: 309 T-GRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSI 367

Query: 330 KVLITI 335
           + ++ I
Sbjct: 368 RTVVKI 373

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  374 bits (962), Expect = e-129
 Identities = 117/305 (38%), Positives = 176/305 (57%), Gaps = 7/305 (2%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMS 90
           VVES G  V  VK GD VIP ++ +C  C  C S  +N C K  +    GLM D TSR +
Sbjct: 73  VVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT 132

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            RG+ +Y++   ST++EY V+    V K+DP   P ++  + CGF TGYGAA   AKV  
Sbjct: 133 CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKA-PLESCLIGCGFATGYGAAVNTAKVTP 191

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           GS+ AV GLG VG  A+ G +  GA++IIG+  +  K  K    G T+ +NP D  +K I
Sbjct: 192 GSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY-DKPI 250

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVIALA 269
            E++   T+G GVDY  EC G    +  AL++T  G G  +V+G+   +  +PL+ + L 
Sbjct: 251 YEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLL 309

Query: 270 CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV 329
             GR+LKG+ FGG K + ++  L+D    K+  ++ L++  + L++I+KA +LL     V
Sbjct: 310 T-GRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGV 367

Query: 330 KVLIT 334
           + ++ 
Sbjct: 368 RSIMI 372

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  373 bits (961), Expect = e-129
 Identities = 117/308 (37%), Positives = 174/308 (56%), Gaps = 9/308 (2%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-----PIALNGLMLDST 86
           +VES G  V   K GD VIP +  +CK C+ C S +TNLC K      P     LM D T
Sbjct: 72  IVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRT 131

Query: 87  SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 146
           SR + +G+ +YH    S++S+Y V+    + +VD   +      + CGF++GYGAA   A
Sbjct: 132 SRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTA 191

Query: 147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 206
           KV  GS+ AV GLG VGL A+ G ++ GA++II ID N  K  K KA G TD +NP +  
Sbjct: 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPREL- 250

Query: 207 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI 266
           +K + +++  +T G GVDY  +C G    L  A++ T +G G   V+G      + +  +
Sbjct: 251 DKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK-VDEMTIPTV 308

Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 326
            +   GR++ GT FGG K+   +P L+   KNK+F L  L+TH +  E I+ AI L+K+ 
Sbjct: 309 DVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEG 367

Query: 327 DCVKVLIT 334
             ++ ++T
Sbjct: 368 KSIRTILT 375

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  316 bits (813), Expect = e-107
 Identities = 86/308 (27%), Positives = 140/308 (45%), Gaps = 11/308 (3%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLMLDSTSRMS 90
           ++E+ G  V E++ GD V+ +Y G C +C  C +     C ++     +G   +    + 
Sbjct: 70  IIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALC 128

Query: 91  VRGQKLY--HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
              Q +   H F+ S+++ Y +   N  VKV   +       L CG  TG GA     KV
Sbjct: 129 THDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKV 188

Query: 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK 208
              SS    G G VGL A+  A++ GA+ II +D    + E  K  G T  IN   +   
Sbjct: 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQD-- 246

Query: 209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG-VDAMVPLNVIA 267
                +K IT G GV++  E TG P +L + ++   +  GK+ V+G   +      +V  
Sbjct: 247 -PVAAIKEITDG-GVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVND 303

Query: 268 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD 327
           L  GG+T+ G   G    K  +P L+   +  +F   QL+      +EI++A    ++  
Sbjct: 304 LLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVK-FYAFDEINQAAIDSRKGI 362

Query: 328 CVKVLITI 335
            +K +I I
Sbjct: 363 TLKPIIKI 370

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  276 bits (708), Expect = 3e-91
 Identities = 77/311 (24%), Positives = 120/311 (38%), Gaps = 25/311 (8%)

Query: 32  VVESAGDEVK-----EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 86
            V     E +      +K GD+++      C EC  C                    +  
Sbjct: 82  RVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCP----------NRK 131

Query: 87  SRMSVRGQKLYHIFSCSTWSEYMVID-ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE 145
                RG   Y       +S ++V+D    V+KV    D    +   C   T Y A  + 
Sbjct: 132 VYGINRGCSEYPHLR-GCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEY 190

Query: 146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 205
            +   G +V + G G +GL  V  AR  GA  +I I  +P + +  +  G    +N  + 
Sbjct: 191 PESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRET 250

Query: 206 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLN 264
             +   + +  ITHG G D+  E TG    L E  E  + G G   V GV      VP  
Sbjct: 251 SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFK 309

Query: 265 VIALACGGRTLKGTTFGGI--KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 322
           V         LK  TF GI     S     +         L +L+TH + L+E +KA++L
Sbjct: 310 VYE----WLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALEL 365

Query: 323 LKQPDCVKVLI 333
           ++  + +KV++
Sbjct: 366 MESREALKVIL 376

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  174 bits (444), Expect = 3e-52
 Identities = 59/295 (20%), Positives = 112/295 (37%), Gaps = 28/295 (9%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
            V   G+ V     GD V       C  C  C     N C               +R + 
Sbjct: 67  TVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYC---------------TRAAD 111

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSC-GFTTGYGAAWKEAKVEK 150
            G     + S  + +EYM++D+   +     +DP  A+ L+  G T  +  +     +  
Sbjct: 112 LGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGP 171

Query: 151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI 210
           GS+  V+G+G +G   +   R   AA++I +D +  +    +  G    +          
Sbjct: 172 GSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGA---- 227

Query: 211 SELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALAC 270
           ++ ++ +T G G    F+  G  S +  A +   V  G + V+G+   A        +  
Sbjct: 228 ADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGAH-AKVGFFMIP 285

Query: 271 GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325
            G ++    +G   T+S+L  ++   +     +H   T    L+E   A + L++
Sbjct: 286 FGASVVTPYWG---TRSELMEVVALARAGRLDIH---TETFTLDEGPAAYRRLRE 334

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  174 bits (444), Expect = 4e-52
 Identities = 72/315 (22%), Positives = 119/315 (37%), Gaps = 38/315 (12%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
            V   G EVK+ K GD V+   I                                     
Sbjct: 64  EVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHS-------------------- 103

Query: 92  RGQKLYHIFSCS---TWSEYM-VIDANY-VVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 146
            G      FS      + E+  V DA+  +  +   I    A  +    TTG+  A + A
Sbjct: 104 GGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELA 162

Query: 147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 206
            ++ G +V V+G+G VGL +V GA   GA +I  +       +    +G TD IN  +  
Sbjct: 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG- 221

Query: 207 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV---GVDAMVPL 263
              I E +   T G GVD      G     ++A++  K G   +  +     G +  +P 
Sbjct: 222 --DIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPR 278

Query: 264 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAIQL 322
           +   +  G + + G    G   +  +  L+D    K     +L+TH  +  + I+KA  L
Sbjct: 279 SEWGVGMGHKHIHGGLCPG--GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFML 336

Query: 323 L--KQPDCVKVLITI 335
           +  K  D +K ++ +
Sbjct: 337 MKDKPKDLIKPVVIL 351

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  168 bits (429), Expect = 7e-50
 Identities = 61/315 (19%), Positives = 111/315 (35%), Gaps = 40/315 (12%)

Query: 28  VSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 86
            SG +    G  V ++  GD V     +  C  C  C     + C KY     G   D  
Sbjct: 61  FSGYIDA-VGSGVDDLHPGDAVACVPLLP-CFTCPECLKGFYSQCAKYDFI--GSRRD-- 114

Query: 87  SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAAW 143
                 G           ++EY+V+    V  +   +   D +F   ++ G       A+
Sbjct: 115 ------G----------GFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL-----HAF 153

Query: 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
             A+  +  +V ++G GT+GL A+  A   GA  +  ID +  K    K+FG     N  
Sbjct: 154 HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSS 213

Query: 204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD--AMV 261
           +    S  ++   +          E  GVP  +  A+E       ++ ++G       + 
Sbjct: 214 EM---SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLT 269

Query: 262 PLNVIALACGGRTLKGT--TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 319
                 +     T+ G+   +       +  T       ++  L  L+ H    E   +A
Sbjct: 270 SATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQA 329

Query: 320 IQLL-KQPDCVKVLI 333
           ++ + +     KVL+
Sbjct: 330 VRDIARNAMPGKVLL 344

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  168 bits (429), Expect = 1e-49
 Identities = 71/314 (22%), Positives = 121/314 (38%), Gaps = 42/314 (13%)

Query: 28  VSGKVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 86
             G VVE AG  V+++  G  I     I  C  C  C +   NLC        G+  D  
Sbjct: 83  FCGIVVE-AGSAVRDIAPGARITGDPNIS-CGRCPQCQAGRVNLCRNLRAI--GIHRD-- 136

Query: 87  SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAAW 143
                 G           ++EY+++      ++  ++DP   +F   L+C          
Sbjct: 137 ------G----------GFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL-----HGV 175

Query: 144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
             + ++ GS+VA+LG G +GL  V  AR+ GA  +I   +   K+   +  G T  ++P 
Sbjct: 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPS 235

Query: 204 DEPNKSISELVKGIT--HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV-DAM 260
                 + E + G       GVD   EC GV   + ++    K G G V+++GV      
Sbjct: 236 AG---DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEK 291

Query: 261 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320
           V +    +      + G +F             D       ++ ++++  + L+E    I
Sbjct: 292 VEIEPFDILFRELRVLG-SFIN---PFVHRRAADLVATGAIEIDRMISRRISLDEAPDVI 347

Query: 321 QLLKQPDCVKVLIT 334
                   VKVL+ 
Sbjct: 348 SNPAAAGEVKVLVI 361

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  162 bits (412), Expect = 3e-47
 Identities = 57/298 (19%), Positives = 115/298 (38%), Gaps = 37/298 (12%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
            +E   + V+ +++GD VI         C  C +     C    +   GL +D       
Sbjct: 84  YIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCEN--LEFPGLNID------- 134

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPS---DASFLSCGFTTGYGAAWK-EAK 147
            G           ++E+M      V+K+   I      + + L+    T Y A  K    
Sbjct: 135 -G----------GFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAART 183

Query: 148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 207
           +  G+ VA++G+G +G  AV   ++   A +I +D    K +  +  G    ++   +P 
Sbjct: 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDP- 242

Query: 208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIA 267
               + V  +T G GV+   +  G  + +           G++I++G G    +    I 
Sbjct: 243 ---VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYG--GELRFPTIR 296

Query: 268 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325
           +     + +G+  G      +L  L+      + ++        KL+EI+  ++ L++
Sbjct: 297 VISSEVSFEGSLVG---NYVELHELVTLALQGKVRVE---VDIHKLDEINDVLERLEK 348

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  160 bits (408), Expect = 7e-47
 Identities = 76/315 (24%), Positives = 130/315 (41%), Gaps = 43/315 (13%)

Query: 28  VSGKVVESAGDEVKEVKEGDIVI--PTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85
           V+G+VVE  G  V+ ++ GD V      +  C +C  C     ++C    I   G+  D 
Sbjct: 69  VAGEVVE-IGPGVEGIEVGDYVSVETHIV--CGKCYACRRGQYHVCQNTKIF--GVDTD- 122

Query: 86  TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAA 142
                  G           ++EY V+ A  + K   SI P  A+    L           
Sbjct: 123 -------G----------VFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAV---DTV- 161

Query: 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 202
              A    G SV + G G +GL  +  A+  GA  +I  + + +++E  K  G    INP
Sbjct: 162 --LAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINP 219

Query: 203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV-DAMV 261
            +E    + + V  IT G GVD   E +G P  L + L+      G+V ++G+      +
Sbjct: 220 FEE---DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGKVTI 275

Query: 262 PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAI 320
             N + +     T+ G T  G        T+    ++ +  L  ++TH  K  ++ ++A 
Sbjct: 276 DFNNLIIF-KALTIYGIT--GRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAF 332

Query: 321 QLLKQPDCVKVLITI 335
           +L++     KV+  +
Sbjct: 333 ELMRAGKTGKVVFML 347

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  160 bits (407), Expect = 1e-46
 Identities = 70/311 (22%), Positives = 112/311 (36%), Gaps = 41/311 (13%)

Query: 28  VSGKVVESAGDEVKEVKEGDIVI--PTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85
            SG V    G  V+  + GD V      +  C  C  C +   ++CL   I   G+  D 
Sbjct: 65  FSGVVEA-VGPGVRRPQVGDHVSLESHIV--CHACPACRTGNYHVCLNTQIL--GVDRD- 118

Query: 86  TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAA 142
                  G           ++EY+V+ A         +    A+                
Sbjct: 119 -------G----------GFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV-----HT 156

Query: 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 202
                   G SV + G G +GL A    R  GA  I+  D NP++    + +     +NP
Sbjct: 157 VYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA-DRLVNP 215

Query: 203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 262
            +E    + E+V+ +T G GV+   E +G  + + + L     G G+  ++G+  D +  
Sbjct: 216 LEE---DLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDPIRF 270

Query: 263 LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL 322
                L   G T  G    G +             +    L  LLTH + L    +A  L
Sbjct: 271 DLAGELVMRGITAFGIA--GRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGL 328

Query: 323 LKQPDCVKVLI 333
           L     VKV++
Sbjct: 329 LASGQAVKVIL 339

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  159 bits (403), Expect = 1e-45
 Identities = 73/326 (22%), Positives = 118/326 (36%), Gaps = 50/326 (15%)

Query: 29  SGKVVESAGDEV------KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM 82
           SG VVE AG E       K  + G+ V    +  C  C  C     N C        G  
Sbjct: 100 SGVVVE-AGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNEL--GFN 156

Query: 83  LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF----------LS 132
           +D        G           ++EY+ +DA Y   +       +              S
Sbjct: 157 VD--------G----------AFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTS 198

Query: 133 CGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK 192
             +        +   +  G +V +LG G +GL AV   +  GA+K+I  + +  ++   K
Sbjct: 199 VAY---NAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAK 255

Query: 193 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK--GKV 250
             G    I+P  E   +  E V   T+G+G     E TGVP L+   +E           
Sbjct: 256 ELGADHVIDPTKE---NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINA 312

Query: 251 IVIGVGV-DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTH 309
            V  V   DA +PL           + G+   G       P ++    +    + ++++ 
Sbjct: 313 TVAIVARADAKIPLTGEVFQVRRAQIVGSQ--GHSGHGTFPRVISLMASG-MDMTKIISK 369

Query: 310 HVKLEEIDKAIQLLKQ-PDCVKVLIT 334
            V +EEI + I+ L+     VKV + 
Sbjct: 370 TVSMEEIPEYIKRLQTDKSLVKVTML 395

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  155 bits (394), Expect = 9e-45
 Identities = 64/316 (20%), Positives = 119/316 (37%), Gaps = 49/316 (15%)

Query: 28  VSGKVVESAGDEVKEVKEGDIV-----IPTYIGECKECENCTSEMTNLCLKYPIALNGLM 82
            SG V +  G  VK +K GD V      P      +  E C     NL            
Sbjct: 71  ASGTVEK-VGSSVKHLKPGDRVAIEPGAP-----RENDEFCKMGRYNLSPS--------- 115

Query: 83  LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGY 139
                 +                  +   +A +  K+  ++   + +    LS G     
Sbjct: 116 ------IFFCATPPDD----GNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGI---- 161

Query: 140 GAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 199
             A +   V  G  V V G G +G+  +  A+  GAA+++  D +  +  K K  G    
Sbjct: 162 -HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLV 220

Query: 200 INPDDEPNKSISELVKGITHGMG--VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV 257
           +    E   S  E+ + +   +G   +   ECTG  + +   +  T+ G G ++++G+G 
Sbjct: 221 LQISKE---SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS 276

Query: 258 DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID 317
           + M  + ++  A     +KG  F      +  P  +    +K   +  L+TH   LE+  
Sbjct: 277 E-MTTVPLLHAAIREVDIKG-VFRY---CNTWPVAISMLASKSVNVKPLVTHRFPLEKAL 331

Query: 318 KAIQLLKQPDCVKVLI 333
           +A +  K+   +K+++
Sbjct: 332 EAFETFKKGLGLKIML 347

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  153 bits (388), Expect = 6e-44
 Identities = 68/300 (22%), Positives = 122/300 (40%), Gaps = 35/300 (11%)

Query: 28  VSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 86
           ++GK+ E  GDEV    +GD+V +  + G    C  C     +LC        G+  D  
Sbjct: 70  IAGKIEE-VGDEVVGYSKGDLVAVNPWQG-EGNCYYCRIGEEHLCDSP--RWLGINFD-- 123

Query: 87  SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 146
                 G           ++EY+++     +     ++  +A+ L+C   T Y A  ++A
Sbjct: 124 ------G----------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAV-RKA 166

Query: 147 KVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 205
            ++   ++ V+G  G +G  AV  A+    A IIG+D      E  K  G    IN   +
Sbjct: 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQ 226

Query: 206 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV 265
                   ++ IT   GVD   +       LS   +      GK +++G+   A +  + 
Sbjct: 227 ---DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLF-GADLHYHA 281

Query: 266 IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325
             +        G+  G    +SD   ++     +  K+  ++T  +KLEE ++AI  L+ 
Sbjct: 282 PLITLSEIQFVGSLVG---NQSDFLGIMRLA--EAGKVKPMITKTMKLEEANEAIDNLEN 336

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  149 bits (378), Expect = 2e-42
 Identities = 66/322 (20%), Positives = 117/322 (36%), Gaps = 58/322 (18%)

Query: 28  VSGKVVESAGDEVKEVKEGDIV-----IPTYIGECKECENCTSEMTNLCLKYPIALNGLM 82
            +G+V+      VK +K GD V     +      C  CE C +   N C +         
Sbjct: 80  SAGEVIA-VHPSVKSIKVGDRVAIEPQVI-----CNACEPCLTGRYNGCER--------- 124

Query: 83  LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGY 139
                 +                  Y+   A +  K+  ++   + +    LS       
Sbjct: 125 ------VDFLSTPPVP----GLLRRYVNHPAVWCHKI-GNMSYENGAMLEPLSVAL---- 169

Query: 140 GAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF 199
            A  + A V  G  V + G G +GL  +  A+  GA  ++  D +  + +  K       
Sbjct: 170 -AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVV 228

Query: 200 INPDDEPN-KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD 258
            +  +  + +  ++ +     G+      ECTGV S ++ A+   K G GKV VIGVG +
Sbjct: 229 THKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKN 287

Query: 259 AMVPLNVIALACGGRTLKGT-----TFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL 313
             + +  +  +     L+       T+         P  +   +N    L +L+TH   L
Sbjct: 288 -EIQIPFMRASVREVDLQFQYRYCNTW---------PRAIRLVENGLVDLTRLVTHRFPL 337

Query: 314 EEIDKAIQLLK--QPDCVKVLI 333
           E+  KA +     +   +KV I
Sbjct: 338 EDALKAFETASDPKTGAIKVQI 359

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  144 bits (365), Expect = 2e-40
 Identities = 60/302 (19%), Positives = 115/302 (38%), Gaps = 39/302 (12%)

Query: 28  VSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87
            +G +VE  G E+ +VK+GD V+         C  C     N+C      + G   +   
Sbjct: 67  NAGTIVE-VG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKN--QIIPGQTTN--- 119

Query: 88  RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA---AWK 144
                G           +SEYM++ ++  +    S+ P +A+ L+   TT  GA   A  
Sbjct: 120 -----G----------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALP 164

Query: 145 EAKVEKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
                    V V G+G + +  +   + +     I+GI ++   ++     G        
Sbjct: 165 FISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMK 224

Query: 204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 263
           D        L+  +T G+G     +  G         +      G +I++G+    +  L
Sbjct: 225 D-----AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKRV-SL 277

Query: 264 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323
                A   + L G+ +G   + +DL  ++   ++ + K +      V L++I+KA   L
Sbjct: 278 EAFDTAVWNKKLLGSNYG---SLNDLEDVVRLSESGKIKPY---IIKVPLDDINKAFTNL 331

Query: 324 KQ 325
            +
Sbjct: 332 DE 333

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  143 bits (364), Expect = 6e-40
 Identities = 59/341 (17%), Positives = 104/341 (30%), Gaps = 59/341 (17%)

Query: 32  VVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 90
            V   G +V+ +  GD + +P  +  C  C NC    +++C                   
Sbjct: 71  EVVEKGSDVELMDIGDLVSVPFNVA-CGRCRNCKEARSDVCE---------------NNL 114

Query: 91  VRGQKLYHIFSCSTWS------EYMVI---DANYVV---KVDPSIDPSDASFLSCGFTTG 138
           V        F            EY+++   D   +    K        D + +S    TG
Sbjct: 115 VNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTG 174

Query: 139 YGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD 198
           +      A V+ GS V + G G VG  A  GAR+ GAA +I  D+NP + +     G   
Sbjct: 175 FHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFET 233

Query: 199 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVP--------------SLLSEALETTK 244
               +  P   + + +  I     VD   +  G                  L+   +  +
Sbjct: 234 IDLRNSAP---LRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVR 290

Query: 245 VGKGKVIVIGV-------GVDAMVPLNVIALACGGRTLKGTTFGGIKT--KSDLPTLLDK 295
            G G + + G+        V+       + L  G    K            +    L + 
Sbjct: 291 AG-GAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEA 349

Query: 296 CKNKEFKLH--QLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 334
               +       +    + L++         +    K +I 
Sbjct: 350 ILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVID 390

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  142 bits (360), Expect = 9e-40
 Identities = 72/317 (22%), Positives = 135/317 (42%), Gaps = 44/317 (13%)

Query: 28  VSGKVVESAGDEVKEVKEGDIVI--PTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85
            SG VV+  G  VK +K+GD V   P     C+ C+ C     NLC              
Sbjct: 68  ASGTVVK-VGKNVKHLKKGDRVAVEPGVP--CRRCQFCKEGKYNLCPD------------ 112

Query: 86  TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGYGAA 142
              ++               + Y V  A++  K+  ++   + +    LS G       A
Sbjct: 113 ---LTFCATPPDD----GNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV-----HA 160

Query: 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 202
            + A V+ G++V V+G G +GL +V  A+ +G A ++   ++P + E  K  G    +  
Sbjct: 161 CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG-AFVVCTARSPRRLEVAKNCGADVTLVV 219

Query: 203 DDEPNKSISELVKGITHGMG--VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM 260
           D    +  S +++ I   +G   +   +C+G    ++  +  T+ G G ++++G+G   M
Sbjct: 220 DP-AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQ-M 276

Query: 261 VPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAI 320
           V + ++        +K       +  +D P  L+   +    + QL+TH  KLE+   A 
Sbjct: 277 VTVPLVNACAREIDIKSV----FRYCNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAF 332

Query: 321 QLL--KQPDCVKVLITI 335
           +    K  + +KV+I+ 
Sbjct: 333 EAARKKADNTIKVMISC 349

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  142 bits (360), Expect = 2e-39
 Identities = 75/337 (22%), Positives = 124/337 (36%), Gaps = 52/337 (15%)

Query: 32  VVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS 90
            V   G +V+ ++ GD + +P  +  C  C +C    T +CL    A  G          
Sbjct: 72  EVIEKGRDVENLQIGDLVSVPFNVA-CGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGD 130

Query: 91  VRG-QKLYHIFSCSTWSEY-MVIDANY-VVKVDPSIDPSDAS-----FLSCGFTTGYGAA 142
             G Q           +EY +V  A++ ++K+ P  D +         LS    TGY  A
Sbjct: 131 WTGGQ-----------AEYVLVPYADFNLLKL-PDRDKAMEKIRDLTCLSDILPTGYHGA 178

Query: 143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP 202
              A V  GS+V V G G VGL A   AR+ GAA +I  D NP +    KA G       
Sbjct: 179 -VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLS 237

Query: 203 DDEPNKSISELVKGITHGMGVDYCFECTGVP---------------SLLSEALETTKVGK 247
            D P   + E +  +     VD   +  G                 ++L+  ++ T+V  
Sbjct: 238 LDTP---LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA- 293

Query: 248 GKVIVIGV-------GVDAMVPLNVIALACGGRTLKGTTFGG--IKTKSDLPTLLDKCKN 298
           GK+ + G+        VDA   +  +++  G    K  +F             L+     
Sbjct: 294 GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMW 353

Query: 299 KEFKLHQLL-THHVKLEEIDKAIQLLKQPDCVKVLIT 334
               + +++    + L++  +           K +I 
Sbjct: 354 DRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVID 390

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  135 bits (342), Expect = 5e-37
 Identities = 53/328 (16%), Positives = 93/328 (28%), Gaps = 52/328 (15%)

Query: 28  VSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87
             G V E          +GD+V+P     C  C NC     + C              T 
Sbjct: 68  AIGVVEE----SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCE-------------TG 110

Query: 88  RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF--LSCG---------FT 136
                G             E+   D  Y+VK+  SI+        L+             
Sbjct: 111 EFGEAGIHKMD----GFMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQ 166

Query: 137 TGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM 196
                   +        V V+G G +G+      R +G    +   + P + E+      
Sbjct: 167 KRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET 226

Query: 197 TDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGV 255
                        + + V         D   + TG   ++L   +       G + + G 
Sbjct: 227 KTNYYNSSNGYDKLKDSVG------KFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGF 279

Query: 256 GVDAMVPLNVIALA---CGGRTLKGTTFGGIKTKSDLPTLLD----KCKNKEFKLHQLLT 308
                VPL+   L       +T+ G   G    K      +                L+T
Sbjct: 280 STSGSVPLDYKTLQEIVHTNKTIIGLVNG---QKPHFQQAVVHLASWKTLYPKAAKMLIT 336

Query: 309 HHVKLEEIDKAIQLL--KQPDCVKVLIT 334
             V + +  + +++L  K+   +K+ I 
Sbjct: 337 KTVSINDEKELLKVLREKEHGEIKIRIL 364

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  133 bits (338), Expect = 1e-36
 Identities = 51/331 (15%), Positives = 106/331 (32%), Gaps = 64/331 (19%)

Query: 28  VSGKVVESAGDEVKEVKEGDIV--IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS 85
             G VV+       E++EGDIV             E    +  ++               
Sbjct: 65  AVGVVVDPN---DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPD------------ 109

Query: 86  TSRMSVRGQKLYHI---FSCSTWSEYMVIDANYVVKVDPSIDPSDASF---LSCGFTTGY 139
                   + +            SE+      Y+V++  S           +S       
Sbjct: 110 ---GMYFERGIVGAHGYM-----SEFFTSPEKYLVRIPRSQAE-LGFLIEPISITE---- 156

Query: 140 GAAWKEAKVEK------GSSVAVLGLGTVGLGAVDGARMH--GAAKIIGI---DKNPWKK 188
             A + A   +       SS  VLG G++GL  +   ++   G   +  +   D+     
Sbjct: 157 -KALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI 215

Query: 189 EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG 248
           +  +    T +++    P + + ++ +       +D+ +E TG P    ++++      G
Sbjct: 216 DIIEELDAT-YVDSRQTPVEDVPDVYE------QMDFIYEATGFPKHAIQSVQALAPN-G 267

Query: 249 KVIVIGVGVDAMVPLNVIA----LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLH 304
              ++GV  D    ++  A    +    + L G+    ++        +   K  ++ L 
Sbjct: 268 VGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEH--FEAATVTFTKLPKWFLE 325

Query: 305 QLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 335
            L+T    L E + A         +K  I  
Sbjct: 326 DLVTGVHPLSEFEAAFD--DDDTTIKTAIEF 354

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  118 bits (298), Expect = 7e-31
 Identities = 66/302 (21%), Positives = 106/302 (35%), Gaps = 39/302 (12%)

Query: 30  GKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 88
           G VV   G+ VK  K GD   I    G C  CE C     + C               S 
Sbjct: 70  GVVVG-MGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHA----------DLSG 118

Query: 89  MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSC-GFTTGYGAAWKEAK 147
            +  G          ++ +Y   DA     +    D +  + + C G T  Y  A K A 
Sbjct: 119 YTHDG----------SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV-Y-KALKSAN 166

Query: 148 VEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 205
           +  G  VA+ G    GLG  AV  A+  G  +++GID    K+E  ++ G   FI+   E
Sbjct: 167 LMAGHWVAISGAAG-GLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSIGGEVFIDFTKE 224

Query: 206 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV 265
            +  I   V   T G G       +   + +  +    +   G  +++G+   A    +V
Sbjct: 225 KD--IVGAVLKATDG-GAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAGAKCCSDV 280

Query: 266 IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325
                   ++ G+  G      D    LD       K        V L  + +  + +++
Sbjct: 281 FNQVVKSISIVGSYVGNRA---DTREALDFFARGLVKSP---IKVVGLSTLPEIYEKMEK 334

Query: 326 PD 327
             
Sbjct: 335 GQ 336

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  114 bits (289), Expect = 1e-29
 Identities = 67/299 (22%), Positives = 108/299 (36%), Gaps = 41/299 (13%)

Query: 30  GKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 88
           G V    G  V  VKEGD V +P     C  CE+C      LC K      G  ++    
Sbjct: 67  GYVSA-VGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEK--QQNTGYSVN---- 119

Query: 89  MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
               G           + EY+V D NYV  +   +   + + + C   T Y    K    
Sbjct: 120 ----G----------GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVY-KGLKVTDT 164

Query: 149 EKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 206
             G  V + G+G  GLG  AV  AR  G  ++  +D +  K    +  G    +N  D  
Sbjct: 165 RPGQWVVISGIG--GLGHVAVQYARAMG-LRVAAVDIDDAKLNLARRLGAEVAVNARDTD 221

Query: 207 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI 266
               +  ++    G            P   S+A+   + G G + + G+         + 
Sbjct: 222 ---PAAWLQKEIGGA--HGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGDF-GTPIF 274

Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325
            +   G T++G+  G      DL   LD   + + K         KL++++     L++
Sbjct: 275 DVVLKGITIRGSIVGTRS---DLQESLDFAAHGDVKAT---VSTAKLDDVNDVFGRLRE 327

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  109 bits (274), Expect = 1e-27
 Identities = 76/300 (25%), Positives = 115/300 (38%), Gaps = 43/300 (14%)

Query: 30  GKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 88
           G V E  G  V  +K GD V IP     C  C+ C S    LC        G        
Sbjct: 65  GIVEE-VGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEH--QKNAG-------- 113

Query: 89  MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSC-GFTTGYGAAWKEAK 147
            SV G           ++EY    A+YVVK+  ++   +A+ + C G TT Y  A K   
Sbjct: 114 YSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-Y-KALKVTG 161

Query: 148 VEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 205
            + G  VA+ G+G  GLG  AV  A+  G   ++ +D    K E  K  G    +NP  E
Sbjct: 162 AKPGEWVAIYGIG--GLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKELGADLVVNPLKE 218

Query: 206 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNV 265
                ++ +K      GV               A  + + G G  +++G+  + M P+ +
Sbjct: 219 D---AAKFMKEKVG--GVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEM-PIPI 271

Query: 266 IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325
                 G  + G+  G  K   DL   L      + K          LE+I++    + +
Sbjct: 272 FDTVLNGIKIIGSIVGTRK---DLQEALQFAAEGKVKTI---IEVQPLEKINEVFDRMLK 325

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  101 bits (254), Expect = 8e-25
 Identities = 68/310 (21%), Positives = 123/310 (39%), Gaps = 34/310 (10%)

Query: 28  VSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87
            SG VV++ G  V+    GD V+      C  CE C +   NLC +Y I   G       
Sbjct: 65  GSG-VVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQIL--GEHRH--- 118

Query: 88  RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK 147
                G          T++EY+V+    +     ++   +A+ +   F T +     +  
Sbjct: 119 -----G----------TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLG 163

Query: 148 VEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP 206
           V  G  V V+     V + A+  A++ G A++I    +  K  + KA G  + +N     
Sbjct: 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKALGADETVNYTHP- 221

Query: 207 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVI 266
                + V+ +T G G D   + TG        ++ T  G G++ + G        L   
Sbjct: 222 --DWPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG-GRIAIAGASSGYEGTLPFA 277

Query: 267 ALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP 326
            +     ++ G+T     +KS L  +L   +    KL  ++   + LE   +  +LL++ 
Sbjct: 278 HVFYRQLSILGSTMA---SKSRLFPILRFVEEG--KLKPVVGQVLPLEAAAEGHRLLEER 332

Query: 327 DCV-KVLITI 335
               KV++ +
Sbjct: 333 RVFGKVVLQV 342

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 97.3 bits (243), Expect = 5e-23
 Identities = 70/296 (23%), Positives = 115/296 (38%), Gaps = 38/296 (12%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSV 91
           VVE+ G  V   + GD VI T+     +     +  T        A  G           
Sbjct: 94  VVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPG----------- 142

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
                         SEY+V+   + V    S+D ++AS L C   T + A  ++  +  G
Sbjct: 143 ------------VLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAG 190

Query: 152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS 211
             V V G G V L  +  A+  G A++I    +  K ++  A G    IN  +E      
Sbjct: 191 DRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKLDRAFALGADHGINRLEE---DWV 246

Query: 212 ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDAMVPLNVIALA 269
           E V  +T   G D+  E  G  + L ++L+      G++ VIGV  G +   P+  + L 
Sbjct: 247 ERVYALTGDRGADHILEIAG-GAGLGQSLKAVAPD-GRISVIGVLEGFEVSGPVGPLLL- 303

Query: 270 CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQ 325
                ++G + G  +   DL   +D        L  ++    K  E+ +A+  L +
Sbjct: 304 -KSPVVQGISVGHRRALEDLVGAVD-----RLGLKPVIDMRYKFTEVPEALAHLDR 353

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 97.0 bits (242), Expect = 5e-23
 Identities = 53/326 (16%), Positives = 92/326 (28%), Gaps = 72/326 (22%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G +     V + G  V  +K GD VIP   G                        G    
Sbjct: 89  GNEGVA-QVVAVGSNVTGLKPGDWVIPANAG-----------------------LG---- 120

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 144
                              TW    V     +++V   I    A+ L     T Y     
Sbjct: 121 -------------------TWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMD 161

Query: 145 EAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI----DKNPWKKEKGKAFGMTDF 199
             +++ G SV        VG   +  A   G  + I +           ++ K+ G    
Sbjct: 162 FEQLQPGDSVIQNASNSGVGQAVIQIAAALG-LRTINVVRDRPDIQKLSDRLKSLGAEHV 220

Query: 200 INPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV--GV 257
           I  ++       E+               C G  S  +E L     G G ++  G     
Sbjct: 221 ITEEELRRP---EMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTMVTYGGMAKQ 275

Query: 258 DAMVPLNVIALACGGRTLKGTTFGGIKTKSD-------LPTLLDKCKNKEFKLHQLLTHH 310
             +  ++++        L+G      K           + TL D  +  +          
Sbjct: 276 PVVASVSLLIF--KDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP--ACSQ 331

Query: 311 VKLEEIDKAIQLLKQPDCV-KVLITI 335
           V L++   A++   +P    K ++T+
Sbjct: 332 VPLQDYQSALEASMKPFISSKQILTM 357

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 95.3 bits (237), Expect = 5e-22
 Identities = 53/315 (16%), Positives = 109/315 (34%), Gaps = 46/315 (14%)

Query: 28  VSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87
           ++G VV   G  V   + GD V+   +    E  +  ++                     
Sbjct: 125 LAG-VVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTM----------------LDP 167

Query: 88  RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA--AWKE 145
              + G +          +E  ++ +N ++     +   +A+      +T Y    +   
Sbjct: 168 EQRIWGFETNF----GGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNG 223

Query: 146 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN--- 201
           A +++G +V + G  G +G  A   A   G A  I +  +P K E  +A G    I+   
Sbjct: 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG-ANPICVVSSPQKAEICRAMGAEAIIDRNA 282

Query: 202 -----------PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKV 250
                       D +  K   + ++ +T G  +D  FE  G       ++  T+ G G +
Sbjct: 283 EGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKG-GTI 340

Query: 251 IVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHH 310
                    M   +   L    + + G+ F   +   +   L+      + ++H  L+  
Sbjct: 341 TTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIA-----KGRIHPTLSKV 395

Query: 311 VKLEEIDKAIQLLKQ 325
             LE+  +A   + +
Sbjct: 396 YSLEDTGQAAYDVHR 410

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 94.1 bits (234), Expect = 1e-21
 Identities = 54/326 (16%), Positives = 104/326 (31%), Gaps = 47/326 (14%)

Query: 28  VSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87
            SG VV   G  V+  K GD VI  +     E E  T     L  +              
Sbjct: 117 CSG-VVVRTGIGVRRWKPGDHVI-VHPAHVDEQEPATHGDGMLGTEQRAWGFE------- 167

Query: 88  RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA--AWKE 145
             +  G            +EY V+ A+ ++     +   +A+       T Y    + + 
Sbjct: 168 --TNFG----------GLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRG 215

Query: 146 AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 204
           A++++G  V + G  G +G  A+   +  G    + +  +  K+   +A G    IN  +
Sbjct: 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRALGCDLVINRAE 274

Query: 205 EPNKSISEL--------------VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKV 250
                                  +     G   D  FE TG       ++   + G G V
Sbjct: 275 LGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG-RVTFGLSVIVARRG-GTV 332

Query: 251 IVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHH 310
           +  G     +   +   L    + + G+         +        ++    +   ++  
Sbjct: 333 VTCGSSSGYLHTFDNRYLWMKLKKIVGSHGA---NHEEQQATNRLFESG--AVVPAMSAV 387

Query: 311 VKLEEIDKAIQLLKQPDCV-KVLITI 335
             L E  +A ++++    V KV +  
Sbjct: 388 YPLAEAAEACRVVQTSRQVGKVAVLC 413

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 92.7 bits (231), Expect = 2e-21
 Identities = 58/264 (21%), Positives = 97/264 (36%), Gaps = 36/264 (13%)

Query: 28  VSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 86
           + G+VV   GD+V++   GD+V +   +  CK CE C   + N C       N    D  
Sbjct: 84  IVGRVVA-VGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEP 142

Query: 87  SRMSVRGQKLYHIFSCSTW---SEYMVIDANYVVKVDPSIDPSD-ASFLSCGFTTGYGAA 142
                            T    S+ +V+   YV+++    +     + L C   T Y + 
Sbjct: 143 GH---------------TLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTY-SP 186

Query: 143 WKEAKVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI 200
            +  +   G  V V+G+G  GLG   +  A   GA  ++    +  K+E  KA G  + +
Sbjct: 187 LRHWQAGPGKKVGVVGIG--GLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVV 243

Query: 201 NPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAM 260
           N  +       + +    H    D+       P  L +     K   G + ++G      
Sbjct: 244 NSRNA------DEMA--AHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPH 294

Query: 261 VPLNVIALACGGRTLKGTTFGGIK 284
               V  L    R + G+  GGI 
Sbjct: 295 KSPEVFNLIMKRRAIAGSMIGGIP 318

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 91.5 bits (228), Expect = 4e-21
 Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 35/262 (13%)

Query: 28  VSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 86
           ++G + E  G  VK+ K GD+V +  ++  CK C+ C       C K     + L     
Sbjct: 66  IAGIIKE-VGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHD 124

Query: 87  SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 146
           +   + G           +S  +V+D NYV+ VD +      + L C   T Y +  K +
Sbjct: 125 NEPHMGG-----------YSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTY-SPLKFS 172

Query: 147 KVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD 204
           KV KG+ V V G G  GLG  AV  A   G A++    +N  KK+   + G+  F     
Sbjct: 173 KVTKGTKVGVAGFG--GLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSMGVKHFYTDPK 229

Query: 205 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN 264
           +  + +             D+          L + L+      G + ++G+    + P+ 
Sbjct: 230 QCKEEL-------------DFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVEVAPVL 275

Query: 265 VIA--LACGGRTLKGTTFGGIK 284
            +   +  G R + G+  GGIK
Sbjct: 276 SVFDFIHLGNRKVYGSLIGGIK 297

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 87.6 bits (218), Expect = 1e-19
 Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 35/261 (13%)

Query: 30  GKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSR 88
           G+VVE  G +V +   GDIV +   +G C  C  C  ++   C K   + N + ++    
Sbjct: 73  GEVVE-VGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYIN---- 127

Query: 89  MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYG--AAWKEA 146
               GQ     F+     +  V+   +VVK+   +    A+ L C   T Y   + +   
Sbjct: 128 ----GQPTQGGFA-----KATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLK 178

Query: 147 KVEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPD 203
           +   G    +LGLG  G+G   V  A+  G   +  I  +  K+E+  +  G  D++   
Sbjct: 179 Q--PGLRGGILGLG--GVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGADDYVIGS 233

Query: 204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 263
           D+        +        +DY  +   V   L   L   K+  GK+I++GV ++  +  
Sbjct: 234 DQ------AKMS--ELADSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGV-INNPLQF 283

Query: 264 NVIALACGGRTLKGTTFGGIK 284
               L  G + + G+  G +K
Sbjct: 284 LTPLLMLGRKVITGSFIGSMK 304

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 87.2 bits (217), Expect = 1e-19
 Identities = 67/262 (25%), Positives = 116/262 (44%), Gaps = 33/262 (12%)

Query: 28  VSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST 86
           + G+V E  G +VK+V  GD V +   +G C  CE+C +++ N C K  +    +  D  
Sbjct: 78  IVGEVTE-VGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHD-- 134

Query: 87  SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 146
                 G   Y  +S      +MV +  Y+++   ++     + L C   T Y +  K  
Sbjct: 135 ------GTITYGGYS-----NHMVANERYIIRFPDNMPLDGGAPLLCAGITVY-SPLKYF 182

Query: 147 KVEK-GSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINP 202
            +++ G  + ++GLG  GLG  AV  A+  G +K+  I  +P KKE+  K FG   F+  
Sbjct: 183 GLDEPGKHIGIVGLG--GLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGADSFLVS 239

Query: 203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP 262
            D+      E ++       +D   +       L       K   GK+I++G   +  + 
Sbjct: 240 RDQ------EQMQ--AAAGTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGA-PEKPLE 289

Query: 263 LNVIALACGGRTLKGTTFGGIK 284
           L   +L  G + + G+  GG+K
Sbjct: 290 LPAFSLIAGRKIVAGSGIGGMK 311

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 86.4 bits (215), Expect = 2e-19
 Identities = 53/261 (20%), Positives = 100/261 (38%), Gaps = 33/261 (12%)

Query: 30  GKVVESAGDEV-KEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTS 87
           GKVV+  G +    +K G  V +   +  C EC+ C ++    C K+    +    D   
Sbjct: 72  GKVVK-LGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGY- 129

Query: 88  RMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK 147
            +S  G           ++ Y+ +  ++VV +  +I    A+ L CG  T Y +      
Sbjct: 130 -VSQGG-----------YANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVY-SPLVRNG 176

Query: 148 VEKGSSVAVLGLGTVGLG--AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE 205
              G  V ++GLG  G+G      ++  G A+   I ++  K+E     G   +I   +E
Sbjct: 177 CGPGKKVGIVGLG--GIGSMGTLISKAMG-AETYVISRSSRKREDAMKMGADHYIATLEE 233

Query: 206 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEA--LETTKVGKGKVIVIGVGVDAMVPL 263
            +           +    D    C    + +      +  KVG G+++ I +  +    L
Sbjct: 234 GDWGEK-------YFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISI-PEQHEML 284

Query: 264 NVIALACGGRTLKGTTFGGIK 284
           ++        ++  +  G IK
Sbjct: 285 SLKPYGLKAVSISYSALGSIK 305

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 74.0 bits (182), Expect = 5e-15
 Identities = 43/341 (12%), Positives = 83/341 (24%), Gaps = 85/341 (24%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G +     V   G  V  ++ GD VIP+++                              
Sbjct: 77  GNEGLF-EVIKVGSNVSSLEAGDWVIPSHVNFG--------------------------- 108

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVD-----------PSIDPSDASFLSC 133
                              TW  + + + +  +K+              +  +  + +S 
Sbjct: 109 -------------------TWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISV 149

Query: 134 GFTTGYGAAWKEAKVEKGSSVAVL--GLGTVGLGAVDGARMHGAAKIIGI----DKNPWK 187
              T Y       K+  G    +   G   VG  A    ++      I +          
Sbjct: 150 NPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN-FNSISVIRDRPNLDEV 208

Query: 188 KEKGKAFGMTDFINPDDEPNKSISELVKGIT--HGMGVDYCFECTGVPSLLSEALETTKV 245
               K  G T  I  D   ++     +K      G        C G  S  +        
Sbjct: 209 VASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNN 267

Query: 246 GKGKVIVIGV--GVDAMVPLNVIALACGGRTLKGTTFGGIKTKS------DLPTLLDKCK 297
             G ++  G        +P ++        T  G     +   +       L  ++   +
Sbjct: 268 N-GLMLTYGGMSFQPVTIPTSLYIF--KNFTSAGFWVTELLKNNKELKTSTLNQIIAWYE 324

Query: 298 NKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV----KVLIT 334
             +       +     +      +L +         K LIT
Sbjct: 325 EGKLTDA--KSIETLYDGTKPLHELYQDGVANSKDGKQLIT 363

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 71.1 bits (175), Expect = 4e-14
 Identities = 52/320 (16%), Positives = 102/320 (31%), Gaps = 66/320 (20%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           G +  G +VE+ G  V     G  V+P                                 
Sbjct: 67  GYEGVG-IVENVGAFVSRELIGKRVLP--------------------------------- 92

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK 144
               +   G          TW EY+   A++VV +  SID   A+ +     T +    +
Sbjct: 93  ----LRGEG----------TWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTE 138

Query: 145 EAKVEKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD 203
              +++   + V      +G      +++    ++I + +N    E+    G    I+  
Sbjct: 139 TLNLQRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRLGAAYVIDTS 197

Query: 204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPL 263
             P   + E V  +T+G+G D   +  G P   +E   + +   G  + IG+     V  
Sbjct: 198 TAP---LYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPN-GHFLTIGLLSGIQVNW 252

Query: 264 NVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF------KLHQLLTHHV-KLEEI 316
             I                   +   P    +            +L  +  H   +L ++
Sbjct: 253 AEIVTK-AKVHANIFHLRHWNDEVS-PYKWQETFRHLIRLVENEQLRFMKVHSTYELADV 310

Query: 317 DKAIQLLKQPDCV--KVLIT 334
             A+ +++  +    KV +T
Sbjct: 311 KAAVDVVQSAEKTKGKVFLT 330

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 65.7 bits (161), Expect = 3e-12
 Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 20/239 (8%)

Query: 105 WSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVG 163
           ++E + +  + ++   P +D ++A  L   + T Y A  +  ++  G +V VLG  G +G
Sbjct: 114 YAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIG 173

Query: 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV 223
             A+  A+  G AK+I +       E  K+ G    +  ++      ++ V+  T G GV
Sbjct: 174 TAAIQIAKGMG-AKVIAVVNRTAATEFVKSVGADIVLPLEEG----WAKAVREATGGAGV 228

Query: 224 DYCFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDAMVPLNVIALACGGRTLKGTTFG 281
           D   +  G      +A+ T     G+++V+G   G    + +N + L     +L G  +G
Sbjct: 229 DMVVDPIG-GPAFDDAVRTLASE-GRLLVVGFAAGGIPTIKVNRLLL--RNASLIGVAWG 284

Query: 282 GIKTKSDLPTLLDKCKNKEFKLHQ-----LLTHHVKLEEIDKAIQLLKQPDCV-KVLIT 334
                      L + +    KL        ++  + L E  +A+Q         K+++ 
Sbjct: 285 EFLRTH--ADYLYETQAGLEKLVAEGMRPPVSARIPLSEGRQALQDFADGKVYGKMVLV 341

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 25/180 (13%), Positives = 53/180 (29%), Gaps = 9/180 (5%)

Query: 104 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTV 162
           +W+EY V +A   + +  ++   D + +     T   A +   K E   +  +      +
Sbjct: 119 SWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAI-AMFDIVKQEGEKAFVMTAGASQL 177

Query: 163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMG 222
               +  A+  G  + I   +   +    K  G    +N            ++ +     
Sbjct: 178 CKLIIGLAKEEG-FRPIVTVRRDEQIALLKDIGAAHVLNEKAPD---FEATLREVMKAEQ 233

Query: 223 VDYCFECTGVPSLLSEALETTKVGKGKVIVIGV-GVDAMVPLNVIALACGGRTLKGTTFG 281
                +      L S           + I+ G    DA V      L    + ++G    
Sbjct: 234 PRIFLDAVT-GPLASAIFNAMPKR-ARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLS 291

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 60.3 bits (146), Expect = 2e-10
 Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 14/164 (8%)

Query: 93  GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD-ASFLSCGFTTGYGAAW---KEAKV 148
             K       + +S+Y  I A+  + +     P+D AS      T     A    +  ++
Sbjct: 115 MGKTVAAIGGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLT-----ALGMVETMRL 169

Query: 149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN 207
           E  S++        +G          G  K++ I +   + +  KA G     N      
Sbjct: 170 EGHSALVHTAAASNLGQMLNQICLKDG-IKLVNIVRKQEQADLLKAQGAVHVCNAASP-- 226

Query: 208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVI 251
            +  + +       G    F+ TG   L  + L   +    K  
Sbjct: 227 -TFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSA 269

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 59.5 bits (145), Expect = 3e-10
 Identities = 43/238 (18%), Positives = 80/238 (33%), Gaps = 27/238 (11%)

Query: 107 EYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVGLG 165
           E + +    ++ +   + P +A+     F T Y  A K A+   G  V V    G +G  
Sbjct: 83  ERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAY-LALKRAQARPGEKVLVQAAAGALGTA 141

Query: 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY 225
           AV  AR  G  +++     P K     A G  +     +          +      G+D 
Sbjct: 142 AVQVARAMG-LRVLAAASRPEKLALPLALGAEEAATYAEV--------PERAKAWGGLDL 192

Query: 226 CFECTGVPSLLSEALETTKVGKGKVIVIGV--GVDAMVPLNVIALACGGRTLKGTTFGGI 283
             E  G    + E+L     G G+++ IG   G  A +P   +        + G     +
Sbjct: 193 VLEVRG--KEVEESLGLLAHG-GRLVYIGAAEGEVAPIPPLRLMR--RNLAVLGFWLTPL 247

Query: 284 KTKSDLPTLLDKCKNKEFKLHQ-----LLTHHVKLEEIDKAIQLLKQPDCV-KVLITI 335
             +     L+++               ++       E + A + L       KV++ +
Sbjct: 248 LRE---GALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 47/222 (21%), Positives = 81/222 (36%), Gaps = 15/222 (6%)

Query: 106 SEYMVIDANYVVKVDPSIDPSD-ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG 163
           S    I A+    +  +I     A+    G T  Y    K  +++           G VG
Sbjct: 96  SSVHNIIADKAAILPAAISFEQAAASFLKGLTVYY-LLRKTYEIKPDEQFLFHAAAGGVG 154

Query: 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV 223
           L A   A+  G AK+IG      K +     G    IN  +E    + E +K IT G  V
Sbjct: 155 LIACQWAKALG-AKLIGTVGTAQKAQSALKAGAWQVINYREE---DLVERLKEITGGKKV 210

Query: 224 DYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL-ACGGRTLKGTTFGG 282
              ++  G  +    +L+  +  +G ++  G    A+  +N+  L   G   +   +  G
Sbjct: 211 RVVYDSVGRDT-WERSLDCLQR-RGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQG 268

Query: 283 -IKTKSDL----PTLLDKCKNKEFKLHQLLTHHVKLEEIDKA 319
            I T+ +L      L     +   K+         L++  +A
Sbjct: 269 YITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRA 310

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 55.7 bits (135), Expect = 5e-09
 Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 9/169 (5%)

Query: 106 SEYMVIDANYVVKVDPSIDPSD-ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG 163
           SE  V+    +VK+  S+     A+ +  G T  Y    +  +V+ G  +      G VG
Sbjct: 96  SEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQY-LLRQTYQVKPGEIILFHAAAGGVG 154

Query: 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV 223
             A   A+  G AK+IG   +P K    KA G  + I+   E    +++ V  +T G   
Sbjct: 155 SLACQWAKALG-AKLIGTVSSPEKAAHAKALGAWETIDYSHE---DVAKRVLELTDGKKC 210

Query: 224 DYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGG 272
              ++  G       +L++    +G V+  G     +  +N+  LA   
Sbjct: 211 PVVYDGVG-QDTWLTSLDSVAP-RGLVVSFGNASGPVSGVNLGILAQKD 257

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 46/224 (20%), Positives = 73/224 (32%), Gaps = 19/224 (8%)

Query: 110 VIDANYVVKVDPSIDPSD----ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL 164
           +     V+K+       +    A+ L    T       +   V+KG  V +    G VGL
Sbjct: 105 ISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALS-FTNEAYHVKKGDYVLLFAAAGGVGL 163

Query: 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD 224
                 +M GA   I +     K +  K +G    IN   E    I   V   T+G GVD
Sbjct: 164 ILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASKE---DILRQVLKFTNGKGVD 219

Query: 225 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG-I 283
             F+  G       +L   K  KG  +  G     + P ++  L+    TL      G I
Sbjct: 220 ASFDSVG-KDTFEISLAALKR-KGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYI 277

Query: 284 KTKSDL----PTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 323
               +             +K+  +   +     L +   A   +
Sbjct: 278 ADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADI 319

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 44/177 (24%), Positives = 70/177 (39%), Gaps = 11/177 (6%)

Query: 106 SEYMVIDANYVVKVDPSIDPSDASFLSC---GFTTGYGAAWKEAKVEKGSSVAVLGL-GT 161
           S+  +  A  ++KV   +D  D         G T  Y    +  KV+ G  V +    G 
Sbjct: 99  SQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQY-LLHQTHKVKPGDYVLIHAAAGG 157

Query: 162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM 221
           +G   V  AR  G A +IG      K E  +  G    IN   +     +E+V+ IT G 
Sbjct: 158 MGHIMVPWARHLG-ATVIGTVSTEEKAETARKLGCHHTINYSTQ---DFAEVVREITGGK 213

Query: 222 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT 278
           GVD  ++  G  + L ++L+  +  +G     G       P+ V+       +L  T
Sbjct: 214 GVDVVYDSIGKDT-LQKSLDCLRP-RGMCAAYGHASGVADPIRVVEDLGVRGSLFIT 268

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 52.2 bits (126), Expect = 9e-08
 Identities = 44/176 (25%), Positives = 68/176 (38%), Gaps = 9/176 (5%)

Query: 107 EYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVGLG 165
           EY +   + V K+   +D    + +   + T Y A    A V+ G SV V G  G VGL 
Sbjct: 127 EYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLA 186

Query: 166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY 225
           A   AR +G  KI+G       ++     G  +  N  +       + +K      G+D 
Sbjct: 187 ACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHREVN---YIDKIKKYVGEKGIDI 242

Query: 226 CFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG 281
             E       LS+ L     G G+VIV+G      + +N         ++ G T  
Sbjct: 243 IIEMLA-NVNLSKDLSLLSHG-GRVIVVGSR--GTIEINPRDTMAKESSIIGVTLF 294

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 47/328 (14%), Positives = 95/328 (28%), Gaps = 73/328 (22%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD 84
           GT  +G  V + G +V  ++ GD V                              G   +
Sbjct: 67  GTDYAG-TVVAVGSDVTHIQVGDRVY-----------------------------GAQNE 96

Query: 85  STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA--- 141
              R   +G           +S+Y V       K+   +    A+ L  G +T   A   
Sbjct: 97  MCPRTPDQG----------AFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKL 146

Query: 142 ---------AWKEAKVEKGSSVAVLGLGT-VGLGAVDGARMHGAAKIIGIDKNPWKKEKG 191
                    A +     K   V V G  T      +   R+ G   I     +P   +  
Sbjct: 147 LGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC--SPHNFDLA 204

Query: 192 KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVI 251
           K+ G  +  +       ++++ ++  T    + Y  +C       +          G  +
Sbjct: 205 KSRGAEEVFDYRAP---NLAQTIRTYTKN-NLRYALDCITNVESTTFCFAAIGRAGGHYV 260

Query: 252 VI-GVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF--KLHQLL- 307
            +      A     V      G T+ G             +  ++   ++      QL+ 
Sbjct: 261 SLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVE 320

Query: 308 -----THHVK-----LEEIDKAIQLLKQ 325
                 H ++      + I + ++L+++
Sbjct: 321 DGRLVHHPLRVVQGGFDHIKQGMELVRK 348

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 48/255 (18%), Positives = 89/255 (34%), Gaps = 33/255 (12%)

Query: 105 WSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVG 163
           W+E +     +V K+   +  S+A+     F T Y   ++ A + +G SV V    G VG
Sbjct: 97  WAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVG 156

Query: 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV 223
                         + G   + +K E  K    T   + + +      + VK I+   GV
Sbjct: 157 QAVAQLCSTVPNVTVFGTA-STFKHEAIKDSV-THLFDRNAD----YVQEVKRIS-AEGV 209

Query: 224 DYCFECTGVPSLLSEALETTKVGKGKVIVIGV----------------GVDAMVPLNVIA 267
           D   +C        + L   K   G  I+ G                     +  +N I 
Sbjct: 210 DIVLDCLCG-DNTGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIK 267

Query: 268 LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQ------LLTHHVKLEEIDKAIQ 321
           L    + + G +   +  K     L+     K   L+       ++     LEE+ +A+Q
Sbjct: 268 LYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQ 327

Query: 322 LLKQPDCV-KVLITI 335
            +     + K+++ +
Sbjct: 328 RIHDRGNIGKLILDV 342

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 10/151 (6%)

Query: 105 WSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVG 163
           ++EY V+ A+    V         + L  G  T Y +  +   + +G  V V    G  G
Sbjct: 120 FAEYTVVPASIATPVPSVKPEY-LTLLVSGT-TAYISLKELGGLSEGKKVLVTAAAGGTG 177

Query: 164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV 223
             A+  ++      +IG   +  K    K+ G    IN   EP   +  ++K   +  GV
Sbjct: 178 QFAMQLSKKAK-CHVIGTCSSDEKSAFLKSLGCDRPINYKTEP---VGTVLK-QEYPEGV 232

Query: 224 DYCFECTGVPSLLSEALETTKVGKGKVIVIG 254
           D  +E  G   +   A++     KG++IVIG
Sbjct: 233 DVVYESVGGA-MFDLAVDALAT-KGRLIVIG 261

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 31/176 (17%), Positives = 64/176 (36%), Gaps = 10/176 (5%)

Query: 107 EYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT--VGL 164
           +Y+ +    ++ +   +  + A+ +   + T +        V+ G  V +   G   VG 
Sbjct: 119 QYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHA-GLSGVGT 177

Query: 165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD 224
            A+   RM GA   +    +  K +  +  G     N   E     SE     T G GV+
Sbjct: 178 AAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKKE---DFSEATLKFTKGAGVN 233

Query: 225 YCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGR-TLKGTT 279
              +C G  S   + +    +  G+ ++ G+     +   + +     R +L  + 
Sbjct: 234 LILDCIG-GSYWEKNVNCLALD-GRWVLYGLMGGGDINGPLFSKLLFKRGSLITSL 287

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 27/129 (20%), Positives = 43/129 (33%), Gaps = 13/129 (10%)

Query: 100 FSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-G 158
                +    V D   V ++      + A+ +   F T Y A    A +  G S+ V   
Sbjct: 295 MIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSA 354

Query: 159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD---FINPDDEPNKSISELVK 215
            G VG+ A+  AR  G A++             +A  ++                 +   
Sbjct: 355 AGGVGMAAIQLARHLG-AEVYATASEDKW----QAVELSREHLA----SSRTCDFEQQFL 405

Query: 216 GITHGMGVD 224
           G T G GVD
Sbjct: 406 GATGGRGVD 414

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 32/261 (12%), Positives = 63/261 (24%), Gaps = 87/261 (33%)

Query: 4   FVTLISFALKDSQRLFILVFSGTKVSGK---VVESAGDE-VKEVKEGDIVIPTY---IGE 56
           ++ L    L+      +L+  G   SGK    ++      V+   +  I    +   +  
Sbjct: 137 YLKLRQALLELRPAKNVLID-GVLGSGKTWVALDVCLSYKVQCKMDFKI----FWLNLKN 191

Query: 57  CKECENCTSEMTNLCLK----------------------------------YPIALNGLM 82
           C   E     +  L  +                                  Y   L  L+
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL--LV 249

Query: 83  LDSTSRMSVRGQKLYHIF--SCS---TWSEYMVIDA-NYVVKVDPSIDPSDASFLSCGFT 136
           L      +V+  K ++ F  SC    T     V D  +       S+D       S   T
Sbjct: 250 LL-----NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH-----HSMTLT 299

Query: 137 TGYG----AAWKEAKVEKGSSVAV----LGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK 188
                     + + + +      +      L  +         +           + WK 
Sbjct: 300 PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII------AESIRDGLATW----DNWKH 349

Query: 189 EKGKAFGMT-----DFINPDD 204
                         + + P +
Sbjct: 350 VNCDKLTTIIESSLNVLEPAE 370

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 21/121 (17%)

Query: 113 ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAV-LGLGTVGLGAVDGAR 171
           ++ VV +  ++  ++A+     + T + +  +  ++  G  V +    G VG+ AV  A+
Sbjct: 1   SDLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK 60

Query: 172 MHGAAKIIGIDKNPWKKEKGKAFGM--------TDFINPDDEPNKSISELVKGITHGMGV 223
           M G A+I     +  K+E     G+         DF           ++ +  +T G GV
Sbjct: 61  MIG-ARIYTTAGSDAKREMLSRLGVEYVGDSRSVDF-----------ADEILELTDGYGV 108

Query: 224 D 224
           D
Sbjct: 109 D 109

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	335
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.89
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.22
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.95
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.79
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.71
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.56
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.52
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.52
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.42
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.35
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.2
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.13
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.08
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.07
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.06
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.06
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.95
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.87
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.83
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.81
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.79
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.75
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.75
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.72
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.63
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.63
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.54
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.51
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.43
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.38
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.37
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.29
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.27
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.19
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.17
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.1
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.08
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.08
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.07
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.07
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.06
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.04
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.04
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.04
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.02
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.01
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.99
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.98
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.97
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.96
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.96
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.96
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.96
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.95
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.95
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.94
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.94
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.92
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.91
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.89
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.89
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.88
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.86
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.85
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.85
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.84
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.84
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.83
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.83
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.83
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.82
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.82
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.81
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.81
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.8
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.8
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.79
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.79
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.79
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.78
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.78
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.78
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.77
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.77
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.76
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.75
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.73
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.73
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.73
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.73
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.73
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.71
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.69
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.69
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.69
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.68
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.68
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.68
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.68
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.67
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.67
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.66
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.65
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.65
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.65
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.65
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.64
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.64
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.64
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.63
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.63
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.62
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.61
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.61
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.6
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.6
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.6
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.6
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.58
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.58
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.58
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.57
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.57
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.57
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.57
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.57
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.56
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.56
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.56
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.55
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.55
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.54
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.54
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.54
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.53
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.53
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.53
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.52
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.52
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.52
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.52
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.52
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.51
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.51
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.51
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.5
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.5
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.5
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.5
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.49
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.49
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.49
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.48
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.48
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.47
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.47
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.47
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.46
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.46
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.46
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.46
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.45
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.45
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.45
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.44
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.44
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.44
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.44
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.43
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.43
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.43
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.43
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.43
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.42
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.41
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.41
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.41
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.41
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.41
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.4
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.39
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.39
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.39
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.38
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.37
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.37
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.37
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.36
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.35
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.35
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.34
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.34
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.34
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.34
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.33
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.33
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.32
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.32
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.32
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.32
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.32
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.31
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.3
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.29
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.29
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.28
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.28
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.28
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.27
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.27
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.27
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.27
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.27
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.26
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.26
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.25
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.25
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.24
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.24
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.23
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.23
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.23
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.22
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.22
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.22
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.21
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.21
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.21
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.2
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.2
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.2
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.2
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.19
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.18
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.16
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.16
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.16
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.15
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.15
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.15
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.13
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.13
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	96.13
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.13
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.12
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.12
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.11
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.11
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.11
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.11
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.1
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.1
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.1
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.09
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.08
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.06
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.06
1spx_A	278	Short-chain reductase family member (5L265); paral	96.06
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.06
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.05
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.05
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.04
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.03
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.03
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.02
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	96.02
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.01
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.01
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	96.01
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.01
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.01
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.0
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.0
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.99
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.99
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.99
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.99
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.98
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	95.98
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.97
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	95.97
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.97
1xhl_A	297	Short-chain dehydrogenase/reductase family member	95.96
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.96
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.96
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.95
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.95
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.95
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.95
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.95
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.95
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.94
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.93
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	95.92
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.91
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.91
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.9
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.89
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.88
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.87
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.87
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.86
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.85
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.82
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.82
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.82
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.81
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.8
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	95.79
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.79
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.79
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.79
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.79
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.79
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.78
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	95.78
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.78
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.77
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.76
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.76
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.75
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.75
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.74
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.74
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.74
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.73
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.71
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.71
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.71
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	95.7
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.69
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.68
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.67
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.67
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.67
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.65
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.63
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.63
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.63
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	95.61
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.61
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.61
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.61
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.61
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	95.6
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.6
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.6
4had_A	350	Probable oxidoreductase protein; structural genomi	95.6
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.59
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.59
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.58
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.56
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.55
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.55
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.55
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	95.54
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.54
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	95.52
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.52
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.51
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	95.51
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.5
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.49
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.48
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.48
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.47
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.47
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	95.46
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.46
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	95.45
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.45
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.44
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.44
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	95.43
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.43
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.42
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.41
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.41
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	95.4
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.4
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.4
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	95.38
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.38
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.37
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.37
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	95.35
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	95.35
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.34
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.34
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.34
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.32
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	95.32
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	95.31
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.31
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.31
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.3
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	95.3
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.29
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.29
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.27
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	95.26
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.26
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.26
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.25
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.25
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.24
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	95.24
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.23
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.23
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.23
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.22
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.22
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.2
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	95.19
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	95.19
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	95.19
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.17
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.16
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.15
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	95.15
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	95.13
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	95.12
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.12
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.11
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	95.11
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.11
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.1
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.09
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.04
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.03

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=1.5e-53  Score=396.83  Aligned_cols=324  Identities=42%  Similarity=0.753  Sum_probs=287.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccc-c
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLM-L   83 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~-~   83 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|++|.++.|.+..... .|.. .
T Consensus        49 D~~~~~g~~~~~~~P~v~G-hE~-~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~  126 (378)
T 3uko_A           49 DAYTWSGKDPEGLFPCILG-HEA-AGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMN  126 (378)
T ss_dssp             HHHHHTTCCTTCCSSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTT
T ss_pred             HHHHhcCCCCCCCCCccCC-ccc-eEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccc
Confidence            5666778877778999999 999 9999999999999999999999999999999999999999999865421 3444 6


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      +|..++..+|...++..+.|+|+||+.+|++.++++|+++++++||++++++.|||+++++.++++++++|||+|+|++|
T Consensus       127 ~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG  206 (378)
T 3uko_A          127 DRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVG  206 (378)
T ss_dssp             TSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHH
T ss_pred             cCccccccCCcccccccCCcceEeEEEechhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHH
Confidence            66677777887777788888999999999999999999999999999999999999999899999999999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+.+|+++|++++++++++++++++|+++++++++ ...++.+.+++++++ ++|+||||+|++..++.+++++
T Consensus       207 ~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-~~~~~~~~i~~~~~g-g~D~vid~~g~~~~~~~~~~~l  284 (378)
T 3uko_A          207 LAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKD-HDKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECC  284 (378)
T ss_dssp             HHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGG-CSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTB
T ss_pred             HHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEcccc-CchhHHHHHHHhcCC-CCCEEEECCCCHHHHHHHHHHh
Confidence            99999999999988999999999999999999999999872 116789999999988 9999999999987889999999


Q ss_pred             cc-CCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          244 KV-GKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       244 ~~-~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      ++ + |+++.+|.... ...+++...++ +++++.|+.++.+...+++.++++++.++++++.++++++|||+++++||+
T Consensus       285 ~~g~-G~iv~~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~  362 (378)
T 3uko_A          285 HKGW-GTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFD  362 (378)
T ss_dssp             CTTT-CEEEECSCCCTTCCEEECTHHHH-TTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHH
T ss_pred             hccC-CEEEEEcccCCCCccccCHHHHh-cCcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHH
Confidence            99 5 99999998654 45566666666 589999987765555678999999999999999899999999999999999


Q ss_pred             HhcCCCeeeEEEeC
Q 019822          322 LLKQPDCVKVLITI  335 (335)
Q Consensus       322 ~~~~~~~~k~vi~~  335 (335)
                      .+.+++..|+||++
T Consensus       363 ~~~~g~~~Kvvi~~  376 (378)
T 3uko_A          363 LLHEGTCLRCVLDT  376 (378)
T ss_dssp             HTTCTTCSEEEEET
T ss_pred             HHHCCCceEEEEec
Confidence            99988878999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=8.8e-51  Score=377.66  Aligned_cols=321  Identities=36%  Similarity=0.628  Sum_probs=268.9

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~   84 (335)
                      |++.+.|.++ ..+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|++|.++.|.+..... .|+..+
T Consensus        50 D~~~~~g~~~-~~~P~v~G-hE~-~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~  126 (373)
T 1p0f_A           50 DSSVLKEIIP-SKFPVILG-HEA-VGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMAD  126 (373)
T ss_dssp             HHHHHTTSSC-CCSSBCCC-CCE-EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTT
T ss_pred             hHHHhcCCCC-CCCCcccC-cCc-eEEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccC
Confidence            5566677666 56899999 999 9999999999999999999999999999999999999999999764310 133333


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      |..++..+|....+..+.|+|+||+.+|++.++++|++++++ ||++++++.|||+++.+.++++++++|||+|+|++|+
T Consensus       127 g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~  205 (373)
T 1p0f_A          127 MTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGF  205 (373)
T ss_dssp             SCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHH
T ss_pred             CccccccCCcccccccCCccceeEEEEchhhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence            322222233222222334699999999999999999999999 9999999999999988889999999999999999999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+|+++|+++|++++++++++++++++|+++++++++ ...++.+.+++++++ ++|+|||++|++..+..++++++
T Consensus       206 ~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-~~~~~~~~i~~~t~g-g~Dvvid~~g~~~~~~~~~~~l~  283 (373)
T 1p0f_A          206 SAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD-YDKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTY  283 (373)
T ss_dssp             HHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG-CSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBC
T ss_pred             HHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEeccc-ccchHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHHh
Confidence            9999999999878999999999999999999999998763 014588889998887 99999999998768899999999


Q ss_pred             cCC-eEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          245 VGK-GKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       245 ~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      + + |+++.+|.... ...+++...++.++ ++.|+..+.+. .++++++++++++|++++.++++++|||+++++||+.
T Consensus       284 ~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~  360 (373)
T 1p0f_A          284 C-GSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVFGGFK-GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFEL  360 (373)
T ss_dssp             T-TTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSGGGCC-GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHH
T ss_pred             c-CCCEEEEEccCCCCCccccCHHHhccCc-eEEeeccCCcC-HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHH
Confidence            9 6 89999997653 34566666676677 99988655432 3679999999999999988889999999999999999


Q ss_pred             hcCCCeeeEEEeC
Q 019822          323 LKQPDCVKVLITI  335 (335)
Q Consensus       323 ~~~~~~~k~vi~~  335 (335)
                      +.+++..|+++++
T Consensus       361 ~~~~~~~kvvi~~  373 (373)
T 1p0f_A          361 LSSGQGVRSIMIY  373 (373)
T ss_dssp             TTTSSCSEEEEEC
T ss_pred             HHCCCcceEEEeC
Confidence            9888777999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=8.4e-51  Score=378.20  Aligned_cols=322  Identities=37%  Similarity=0.678  Sum_probs=268.2

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcc----ccc-cc
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP----IAL-NG   80 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~----~~~-~g   80 (335)
                      |++.+.|. +...+|.++| ||+ +|+|+++|++|++|++||||++.+...|+.|++|++|.++.|.+..    ... .|
T Consensus        49 D~~~~~g~-~~~~~P~v~G-hE~-~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G  125 (376)
T 1e3i_A           49 DINATDPK-KKALFPVVLG-HEC-AGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQE  125 (376)
T ss_dssp             HHHTTCTT-SCCCSSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSC
T ss_pred             hHHHhcCC-CCCCCCcccC-ccc-cEEEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCcccccccccc
Confidence            55556675 4456899999 999 9999999999999999999999999999999999999999998754    100 13


Q ss_pred             cccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCC
Q 019822           81 LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLG  160 (335)
Q Consensus        81 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g  160 (335)
                      +..+|..++..+|....+..+.|+|+||+.+|++.++++|+++++++||++++++.|||+++.+.++++++++|||+|+|
T Consensus       126 ~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG  205 (376)
T 1e3i_A          126 LMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLG  205 (376)
T ss_dssp             SCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCS
T ss_pred             ccccCccccccCCcccccccCCccceeEEEeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence            33333222222222222222346999999999999999999999999999999999999998888999999999999999


Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      ++|++++|+|+.+|+++|++++++++++++++++|+++++++++ ...++.+.+++++++ ++|+|||++|++..++.++
T Consensus       206 ~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-~~~~~~~~v~~~~~~-g~Dvvid~~G~~~~~~~~~  283 (376)
T 1e3i_A          206 CVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRE-LDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAV  283 (376)
T ss_dssp             HHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGG-CSSCHHHHHHHHHTS-CBSEEEESSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEcccc-ccchHHHHHHHHhCC-CccEEEECCCCHHHHHHHH
Confidence            99999999999999978999999999999999999999998763 014588889888887 9999999999876889999


Q ss_pred             HhhccCC-eEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHH
Q 019822          241 ETTKVGK-GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA  319 (335)
Q Consensus       241 ~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea  319 (335)
                      +++++ + |+++.+|... ...+++...++.++ ++.|+..+.....+++++++++++++++++.++++++|||+++++|
T Consensus       284 ~~l~~-~~G~iv~~G~~~-~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A  360 (376)
T 1e3i_A          284 DCTVL-GWGSCTVVGAKV-DEMTIPTVDVILGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDA  360 (376)
T ss_dssp             HTBCT-TTCEEEECCCSS-SEEEEEHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHH
T ss_pred             HHhhc-CCCEEEEECCCC-CccccCHHHhhccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHH
Confidence            99999 6 8999999843 45567777777788 9998865543334678999999999999988889999999999999


Q ss_pred             HHHhcCCCeeeEEEeC
Q 019822          320 IQLLKQPDCVKVLITI  335 (335)
Q Consensus       320 ~~~~~~~~~~k~vi~~  335 (335)
                      |+.+.+++..|++|++
T Consensus       361 ~~~~~~~~~~Kvvi~~  376 (376)
T 1e3i_A          361 IDLMKEGKSIRTILTF  376 (376)
T ss_dssp             HHHHHTTCCSEEEEEC
T ss_pred             HHHHhcCCcceEEEeC
Confidence            9999888777999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.9e-51  Score=377.46  Aligned_cols=323  Identities=38%  Similarity=0.654  Sum_probs=270.6

Q ss_pred             EEe-EeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-ccccc
Q 019822            6 TLI-SFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLML   83 (335)
Q Consensus         6 d~~-~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~   83 (335)
                      |++ .+.|.++ ..+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|++|+++.|.+..... .|+..
T Consensus        49 D~~~~~~g~~~-~~~P~v~G-hE~-~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~  125 (374)
T 1cdo_A           49 DLYHLFEGKHK-DGFPVVLG-HEG-AGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMS  125 (374)
T ss_dssp             HHHHHHTTCCT-TSCSEECC-CCE-EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTS
T ss_pred             hHHHHhCCCCC-CCCCcccC-ccc-eEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCccccccccccc
Confidence            455 5667666 56899999 999 9999999999999999999999999999999999999999998764310 13333


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      +|..++..+|...++..+.|+|+||+.+|++.++++|+++++++||++++++.|||+++.++++++++++|||+|+|++|
T Consensus       126 ~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG  205 (374)
T 1cdo_A          126 PKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVG  205 (374)
T ss_dssp             CSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHH
T ss_pred             CCccccccCCcccccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHH
Confidence            33333333333333333346999999999999999999999999999999999999998888999999999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+.+|+++|++++++++++++++++|+++++++++ ...++.+.+++++++ ++|+|||++|.+..+..+++++
T Consensus       206 ~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l  283 (374)
T 1cdo_A          206 LAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPND-HSEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALESC  283 (374)
T ss_dssp             HHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGG-CSSCHHHHHHHHHTS-CBSEEEECSCCHHHHHHHHHTB
T ss_pred             HHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccc-cchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHh
Confidence            99999999999978999999999999999999999998763 013588888888887 9999999999876889999999


Q ss_pred             ccCC-eEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          244 KVGK-GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       244 ~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      ++ + |+++.+|.......+++...++.++ ++.|+..+.....+++++++++++++++++.++++++|||+++++||+.
T Consensus       284 ~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~  361 (374)
T 1cdo_A          284 LK-GWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDL  361 (374)
T ss_dssp             CT-TTCEEEECSCCSSSCEEECHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHH
T ss_pred             hc-CCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHH
Confidence            99 6 8999999765334556666777677 9998865543334678999999999999988889999999999999999


Q ss_pred             hcCCCeeeEEEeC
Q 019822          323 LKQPDCVKVLITI  335 (335)
Q Consensus       323 ~~~~~~~k~vi~~  335 (335)
                      +.+++..|++|++
T Consensus       362 ~~~~~~~kvvi~~  374 (374)
T 1cdo_A          362 MKHGKCIRTVLSL  374 (374)
T ss_dssp             HHTTCCSEEEEEC
T ss_pred             HHCCCeeEEEEeC
Confidence            9888778999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=5.1e-51  Score=379.31  Aligned_cols=324  Identities=38%  Similarity=0.677  Sum_probs=271.2

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~   84 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|+.|.++.|.+..... .|+..+
T Consensus        47 D~~~~~g~~~~~~~P~v~G-hE~-~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~  124 (373)
T 2fzw_A           47 DAYTLSGADPEGCFPVILG-HLG-AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPD  124 (373)
T ss_dssp             HHHHHHTCCTTCCSSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTT
T ss_pred             hHHHhcCCCCCCCCCcccc-ccc-cEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccC
Confidence            5566677776556899999 999 9999999999999999999999999999999999999999998754310 133333


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      |..++..+|....+..+.|+|+||+.+|++.++++|+++++++||++++++.|||+++.+.++++++++|||+|+|++|+
T Consensus       125 g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~  204 (373)
T 2fzw_A          125 GTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGL  204 (373)
T ss_dssp             SCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHH
T ss_pred             CcccccccccccccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHH
Confidence            33333333332223333469999999999999999999999999999999999999988889999999999999999999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+|+.+|+++|++++++++++++++++|+++++++++ ...++.+.+++++++ ++|+|||++|+...++.++++++
T Consensus       205 ~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~v~~~~~~-g~D~vid~~g~~~~~~~~~~~l~  282 (373)
T 2fzw_A          205 AVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQD-FSKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACH  282 (373)
T ss_dssp             HHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGG-CSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBC
T ss_pred             HHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc-ccccHHHHHHHHhCC-CCCEEEECCCcHHHHHHHHHhhc
Confidence            9999999999878999999999999999999999998763 013588889888887 99999999998768899999999


Q ss_pred             cCC-eEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          245 VGK-GKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       245 ~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      + + |+++.+|.... ...+++...++.++ ++.|+.++.+...+++++++++++++++++.++++++|||+++++||+.
T Consensus       283 ~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~  360 (373)
T 2fzw_A          283 K-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFEL  360 (373)
T ss_dssp             T-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHH
T ss_pred             c-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHH
Confidence            9 6 89999997653 34556666677677 9998866543334678999999999999988889999999999999999


Q ss_pred             hcCCCeeeEEEeC
Q 019822          323 LKQPDCVKVLITI  335 (335)
Q Consensus       323 ~~~~~~~k~vi~~  335 (335)
                      +.+++..|+++++
T Consensus       361 ~~~~~~~kvvi~~  373 (373)
T 2fzw_A          361 MHSGKSIRTVVKI  373 (373)
T ss_dssp             HHHTCCSEEEEEC
T ss_pred             HhCCCcceEEEeC
Confidence            9887777999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=1.2e-50  Score=376.81  Aligned_cols=323  Identities=36%  Similarity=0.630  Sum_probs=269.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~   84 (335)
                      |++.+.|.++.. +|.++| ||+ +|+|+++|++|++|++||||++.+...|+.|++|++|.++.|.+..... .|+..+
T Consensus        49 D~~~~~g~~~~~-~P~v~G-hE~-~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~  125 (374)
T 2jhf_A           49 DDHVVSGTLVTP-LPVIAG-HEA-AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQD  125 (374)
T ss_dssp             HHHHHHTSSCCC-SSBCCC-CSE-EEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTT
T ss_pred             hHHHHcCCCCCC-CCcccC-cCc-eEEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccC
Confidence            555666766543 899999 999 9999999999999999999999999999999999999999999764320 133333


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      |..++..+|....+....|+|+||+.+|++.++++|+++++++||++++++.|||+++.+.++++++++|||+|+|++|+
T Consensus       126 g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~  205 (374)
T 2jhf_A          126 GTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGL  205 (374)
T ss_dssp             SCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHH
T ss_pred             CcccccccccccccccCCccCeeEEEEchHHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence            32222222322222233469999999999999999999999999999999999999988889999999999999999999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+|+.+|+++|++++++++++++++++|+++++++++ ...++.+.+++++++ ++|+|||++|.+..+..++++++
T Consensus       206 ~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~  283 (374)
T 2jhf_A          206 SVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQD-YKKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQ  283 (374)
T ss_dssp             HHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGG-CSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHHBC
T ss_pred             HHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccc-cchhHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhh
Confidence            9999999999878999999999999999999999998763 013578888888887 99999999998768899999999


Q ss_pred             cCC-eEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          245 VGK-GKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       245 ~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      + + |+++.+|.... ...+++...++.++ ++.|+..+.+...++++++++++++|++++.++++++|||+++++||+.
T Consensus       284 ~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~  361 (374)
T 2jhf_A          284 E-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDL  361 (374)
T ss_dssp             T-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHH
T ss_pred             c-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHH
Confidence            9 6 89999997653 34556666677678 9998865543334678999999999999988889999999999999999


Q ss_pred             hcCCCeeeEEEeC
Q 019822          323 LKQPDCVKVLITI  335 (335)
Q Consensus       323 ~~~~~~~k~vi~~  335 (335)
                      +.+++..|+++++
T Consensus       362 ~~~~~~~Kvvi~~  374 (374)
T 2jhf_A          362 LRSGESIRTILTF  374 (374)
T ss_dssp             HHTTCCSEEEEEC
T ss_pred             HHCCCcceEEEeC
Confidence            9888777999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-50  Score=376.78  Aligned_cols=320  Identities=28%  Similarity=0.428  Sum_probs=267.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~   84 (335)
                      |++.+.|.++ ..+|.++| ||+ +|+|+++|++|++|++||+|++.+ ..|+.|++|++|.++.|.+..... .|...+
T Consensus        47 D~~~~~g~~~-~~~P~v~G-hE~-~G~V~~vG~~v~~~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~  122 (371)
T 1f8f_A           47 DLIVRDQKYP-VPLPAVLG-HEG-SGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSE  122 (371)
T ss_dssp             HHHHHTTSSC-CCSSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSS
T ss_pred             hHHHHcCCCC-CCCCcccC-ccc-ceEEEEeCCCCCCCCCCCEEEecC-CCCCCChhhhCcCcccccccccccccccccc
Confidence            5566677665 35799999 999 999999999999999999999999 999999999999999998764210 121112


Q ss_pred             CCcccc-ccCcee-ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           85 STSRMS-VRGQKL-YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        85 g~~~~~-~~~~~~-~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                      |...++ .+|... .+..+.|+|+||+.+|++.++++|+++++++||++++++.|||+++.+.++++++++|||+|+|++
T Consensus       123 g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~v  202 (371)
T 1f8f_A          123 GNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAV  202 (371)
T ss_dssp             SCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHH
T ss_pred             ccccccccCCccccccccCCccccCeEEechhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHH
Confidence            211110 011000 011224699999999999999999999999999999999999999988899999999999999999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |++++|+|+.+|+++|++++++++++++++++|+++++++++   .++.+.+++++++ ++|+|||++|.+..++.++++
T Consensus       203 G~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~~~~~~~~g-g~D~vid~~g~~~~~~~~~~~  278 (371)
T 1f8f_A          203 GLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKT---QDPVAAIKEITDG-GVNFALESTGSPEILKQGVDA  278 (371)
T ss_dssp             HHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCc---cCHHHHHHHhcCC-CCcEEEECCCCHHHHHHHHHH
Confidence            999999999999977999999999999999999999999887   7788899998888 999999999987688999999


Q ss_pred             hccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      ++++ |+++.+|.... ...+++...++.+++++.++..+.....++++++++++++|++++.+++++ |||+++++||+
T Consensus       279 l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~  356 (371)
T 1f8f_A          279 LGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAI  356 (371)
T ss_dssp             EEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHH
T ss_pred             HhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHH
Confidence            9998 99999998653 345677777888999999987654323467899999999999998888888 99999999999


Q ss_pred             HhcCCCeeeEEEeC
Q 019822          322 LLKQPDCVKVLITI  335 (335)
Q Consensus       322 ~~~~~~~~k~vi~~  335 (335)
                      .+.+++..|+++++
T Consensus       357 ~~~~~~~~Kvvv~~  370 (371)
T 1f8f_A          357 DSRKGITLKPIIKI  370 (371)
T ss_dssp             HHHHTSCSEEEEEC
T ss_pred             HHHCCCceEEEEee
Confidence            99887777999875

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=7.2e-50  Score=370.81  Aligned_cols=295  Identities=20%  Similarity=0.349  Sum_probs=264.8

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++ ..+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|+.|.++.|.+...  +|+..+|
T Consensus        63 D~~~~~G~~~-~~~p~v~G-~e~-~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~~G  137 (370)
T 4ej6_A           63 DRHLLHGEFP-STPPVTLG-HEF-CGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRA--IGIHRDG  137 (370)
T ss_dssp             HHHHHTTSSC-CCSSEECC-CSE-EEEEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE--BTTTBCC
T ss_pred             HHHHHcCCCC-CCCCeecC-cce-EEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccc--cCCCCCC
Confidence            4555667764 46799999 999 99999999999999999999999999999999999999999998766  4666665


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                                        +|+||+.+|++.++++|+++++++|| +..+++|||+++ +.++++++++|||+|+|++|++
T Consensus       138 ------------------~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~  197 (370)
T 4ej6_A          138 ------------------GFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLL  197 (370)
T ss_dssp             ------------------SSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHH
T ss_pred             ------------------cceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHH
Confidence                              99999999999999999999999998 556899999988 8899999999999999999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHh---hhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKG---ITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~---~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      ++|+|+++|+++|++++++++++++++++|+++++++++   .++.+.+++   ++++ ++|+||||+|+...++.++++
T Consensus       198 aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~~i~~~~~~~~g-g~Dvvid~~G~~~~~~~~~~~  273 (370)
T 4ej6_A          198 TVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA---GDVVEAIAGPVGLVPG-GVDVVIECAGVAETVKQSTRL  273 (370)
T ss_dssp             HHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTS---SCHHHHHHSTTSSSTT-CEEEEEECSCCHHHHHHHHHH
T ss_pred             HHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCC---cCHHHHHHhhhhccCC-CCCEEEECCCCHHHHHHHHHH
Confidence            999999999989999999999999999999999999987   788889988   7777 999999999987789999999


Q ss_pred             hccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      ++++ |+++.+|.... ...+++...++.+++++.|+...    ..+++++++++++|++++.++++++|||+++++||+
T Consensus       274 l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~  348 (370)
T 4ej6_A          274 AKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSFIN----PFVHRRAADLVATGAIEIDRMISRRISLDEAPDVIS  348 (370)
T ss_dssp             EEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSC----TTCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHH
T ss_pred             hccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEEeccC----hHHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHH
Confidence            9998 99999998765 46678888888999999998643    357999999999999999999999999999999999


Q ss_pred             HhcCCCe--eeEEEe
Q 019822          322 LLKQPDC--VKVLIT  334 (335)
Q Consensus       322 ~~~~~~~--~k~vi~  334 (335)
                      .+.+++.  .|++++
T Consensus       349 ~~~~~~~~~~kvv~~  363 (370)
T 4ej6_A          349 NPAAAGEVKVLVIPS  363 (370)
T ss_dssp             SCCCTTCSEEEECCC
T ss_pred             HHHcCCCCeEEEEEc
Confidence            9987763  477664

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=6.7e-49  Score=361.45  Aligned_cols=301  Identities=20%  Similarity=0.300  Sum_probs=263.5

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|..+ ..+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|.+|+.|.++.|.+...  +|...+|
T Consensus        41 D~~~~~g~~~-~~~P~i~G-~E~-~G~V~~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~--~g~~~~G  115 (346)
T 4a2c_A           41 DLPRIFKNGA-HYYPITLG-HEF-SGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDF--IGSRRDG  115 (346)
T ss_dssp             HHHHHHSSCS-SSSSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEE--BTTTBCC
T ss_pred             HHHHHcCCCC-CCCCcccc-EEE-EEEEEEECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCccc--ccCCCCc
Confidence            4555666554 36899999 999 99999999999999999999999999999999999999999998877  4776666


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                                        +|+||+.+|++.++++|+++++++||+++ +++++++ +....++.++++|||+|+|++|++
T Consensus       116 ------------------~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~  175 (346)
T 4a2c_A          116 ------------------GFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLL  175 (346)
T ss_dssp             ------------------SSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHH
T ss_pred             ------------------ccccccccchheEEECCCCCCHHHHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchH
Confidence                              99999999999999999999999999876 4555554 568899999999999999999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++|+|+++|+..+++++++++|+++++++|+++++|+++   .++.+.++++++++++|+|+|++|.+..++.+++++++
T Consensus       176 aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~---~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~  252 (346)
T 4a2c_A          176 AIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE---MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGP  252 (346)
T ss_dssp             HHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT---SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCT
T ss_pred             HHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC---CCHHHHHHhhcccCCcccccccccccchhhhhhheecC
Confidence            999999999977889999999999999999999999998   77888888889888999999999998889999999999


Q ss_pred             CCeEEEEEccCCC--ccccchhHHHhhcCcEEEEeeccCC--CCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          246 GKGKVIVIGVGVD--AMVPLNVIALACGGRTLKGTTFGGI--KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       246 ~~G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      + |+++.+|....  .....+...++.+++++.|+.....  ...++++.+++++++|+++++++++++|||+++++|++
T Consensus       253 ~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~  331 (346)
T 4a2c_A          253 H-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVR  331 (346)
T ss_dssp             T-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHH
T ss_pred             C-eEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHH
Confidence            7 99999998765  1233455567789999999865432  22457899999999999999999999999999999999


Q ss_pred             HhcCCCee-eEEEeC
Q 019822          322 LLKQPDCV-KVLITI  335 (335)
Q Consensus       322 ~~~~~~~~-k~vi~~  335 (335)
                      .+.+++.. |+||.+
T Consensus       332 ~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          332 DIARNAMPGKVLLIP  346 (346)
T ss_dssp             HHTTSCCCSEEEECC
T ss_pred             HHHcCCCceEEEEEC
Confidence            99887764 999864

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.9e-49  Score=364.61  Aligned_cols=292  Identities=20%  Similarity=0.283  Sum_probs=255.7

Q ss_pred             EEeEeecCCC---CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc
Q 019822            6 TLISFALKDS---QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM   82 (335)
Q Consensus         6 d~~~~~g~~~---~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~   82 (335)
                      |++.+.|.++   ...+|.++| ||+ +|+|+++|++|++|++||+|+..+...|+.|++|++|.+++|.+...  +|+.
T Consensus        57 D~~~~~g~~~~~~~~~~p~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~G~~  132 (359)
T 1h2b_A           57 DLHLVQGMWHELLQPKLPYTLG-HEN-VGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF--PGLN  132 (359)
T ss_dssp             HHHHHHTTTHHHHCCCSSEECC-CCE-EEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC--BTTT
T ss_pred             chHHHhCCCccccCCCCCeecC-cCc-eEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc--cccC
Confidence            5555667665   346899999 999 99999999999999999999998889999999999999999997654  4654


Q ss_pred             cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCccccc---ccccchhhhhHHHHHh-cCCCCCCEEEEEc
Q 019822           83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDAS---FLSCGFTTGYGAAWKE-AKVEKGSSVAVLG  158 (335)
Q Consensus        83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa---~l~~~~~ta~~~l~~~-~~~~~~~~VlI~G  158 (335)
                      .+|                  +|+||+.+|++.++++|+++++++||   .+++++.|||+++.+. ++++++++|||+|
T Consensus       133 ~~G------------------~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~G  194 (359)
T 1h2b_A          133 IDG------------------GFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVG  194 (359)
T ss_dssp             BCC------------------SSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred             CCC------------------cccceEEechHhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEEC
Confidence            444                  99999999999999999999999998   7888889999998665 8999999999999


Q ss_pred             CCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH--H
Q 019822          159 LGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS--L  235 (335)
Q Consensus       159 ~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~--~  235 (335)
                      +|++|++++|+|+++ |+ +|++++++++++++++++|+++++|+++   . +.+.++++++++++|+|||++|++.  .
T Consensus       195 aG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~  269 (359)
T 1h2b_A          195 VGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERLGADHVVDARR---D-PVKQVMELTRGRGVNVAMDFVGSQATVD  269 (359)
T ss_dssp             CSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHTTCSEEEETTS---C-HHHHHHHHTTTCCEEEEEESSCCHHHHH
T ss_pred             CCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHhCCCEEEeccc---h-HHHHHHHHhCCCCCcEEEECCCCchHHH
Confidence            999999999999999 99 9999999999999999999999999987   6 8888888888779999999999986  6


Q ss_pred             HHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechh
Q 019822          236 LSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE  315 (335)
Q Consensus       236 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~  315 (335)
                      +..++++  ++ |+++.+|.... . +++...++.+++++.|+...+   .+++++++++++++++++.  + ++|||++
T Consensus       270 ~~~~~~~--~~-G~~v~~g~~~~-~-~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--i-~~~~l~~  338 (359)
T 1h2b_A          270 YTPYLLG--RM-GRLIIVGYGGE-L-RFPTIRVISSEVSFEGSLVGN---YVELHELVTLALQGKVRVE--V-DIHKLDE  338 (359)
T ss_dssp             HGGGGEE--EE-EEEEECCCSSC-C-CCCHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSCCCC--E-EEEEGGG
T ss_pred             HHHHhhc--CC-CEEEEEeCCCC-C-CCCHHHHHhCCcEEEEecCCC---HHHHHHHHHHHHcCCCcce--E-EEEeHHH
Confidence            7788777  86 99999998653 3 677777788999999976432   4678999999999997653  6 8999999


Q ss_pred             HHHHHHHhcCCCe-eeEEEeC
Q 019822          316 IDKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       316 ~~ea~~~~~~~~~-~k~vi~~  335 (335)
                      +++||+.+.+++. .|+|+++
T Consensus       339 ~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          339 INDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHcCCCceEEEeeC
Confidence            9999999988875 5999875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=4.1e-49  Score=363.09  Aligned_cols=298  Identities=23%  Similarity=0.343  Sum_probs=249.6

Q ss_pred             EEeEeec-CCC--CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc
Q 019822            6 TLISFAL-KDS--QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM   82 (335)
Q Consensus         6 d~~~~~g-~~~--~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~   82 (335)
                      |++.+.| .++  ...+|.++| ||+ +|+|+++|++|++|++||||++.+...|+.|++|++|+++.|.+...  +|..
T Consensus        45 D~~~~~g~~~~~~~~~~p~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~  120 (348)
T 2d8a_A           45 DLHIYEWNEWAQSRIKPPQIMG-HEV-AGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI--FGVD  120 (348)
T ss_dssp             HHHHHHTCTTHHHHCCSSEECC-CEE-EEEEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEE--TTTS
T ss_pred             HHHHHcCCCCCcccCCCCCccC-ccc-eEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCe--ecCC
Confidence            4455566 443  246799999 999 99999999999999999999999999999999999999999998655  3544


Q ss_pred             cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                      .+|                  +|+||+.+|++.++++|+++++++||++. ++.|||+++ +++++ ++++|||+|+|++
T Consensus       121 ~~G------------------~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~v  179 (348)
T 2d8a_A          121 TDG------------------VFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPL  179 (348)
T ss_dssp             SCC------------------SSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHH
T ss_pred             CCC------------------cCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHH
Confidence            444                  99999999999999999999999999886 888999998 77889 9999999999999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |++++|+|+.+|+++|++++++++++++++++|+++++++++   .++.+.++++++++++|+|||++|.+..++.++++
T Consensus       180 G~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~  256 (348)
T 2d8a_A          180 GLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE---EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQA  256 (348)
T ss_dssp             HHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTT---SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHH
Confidence            999999999999878999999999999999999999999887   77888999998888999999999987688999999


Q ss_pred             hccCCeEEEEEccCCCccccchh-HHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEee-chhHHHHH
Q 019822          243 TKVGKGKVIVIGVGVDAMVPLNV-IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEIDKAI  320 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-l~~~~ea~  320 (335)
                      ++++ |+++.+|.... ...++. ..++.+++++.|+....  ..++++++++++++|++++.++++++|| |+++++||
T Consensus       257 l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~  332 (348)
T 2d8a_A          257 VTPA-GRVSLLGLYPG-KVTIDFNNLIIFKALTIYGITGRH--LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAF  332 (348)
T ss_dssp             EEEE-EEEEECCCCSS-CCCCCHHHHTTTTTCEEEECCCCC--SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHH
T ss_pred             HhcC-CEEEEEccCCC-CcccCchHHHHhCCcEEEEecCCC--cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHH
Confidence            9997 99999998653 456666 67778999999875332  1467899999999999988888999999 99999999


Q ss_pred             HHhcCCCeeeEEEeC
Q 019822          321 QLLKQPDCVKVLITI  335 (335)
Q Consensus       321 ~~~~~~~~~k~vi~~  335 (335)
                      +.+.++...|+++++
T Consensus       333 ~~~~~~~~gKvvi~~  347 (348)
T 2d8a_A          333 ELMRAGKTGKVVFML  347 (348)
T ss_dssp             HHHHTTCCSEEEEEC
T ss_pred             HHHhCCCceEEEEee
Confidence            999875556999874

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=7.9e-49  Score=360.14  Aligned_cols=293  Identities=23%  Similarity=0.343  Sum_probs=261.6

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEE-ecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVI-PTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|++|++||+|+ ..+...|+.|++|++|+++.|.+...  .|+..
T Consensus        43 D~~~~~g~~~~~~~~P~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~--~g~~~  118 (340)
T 3s2e_A           43 DLHAADGDWPVKPTLPFIPG-HEG-VGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQN--TGYSV  118 (340)
T ss_dssp             HHHHHHTCSSSCCCSSBCCC-SEE-EEEEEEECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEE--BTTTB
T ss_pred             HHHHHcCCCCCCCCCCcccC-Ccc-eEEEEEECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccc--cCCCC
Confidence            55667787775 57899999 999 999999999999999999994 56678999999999999999998766  46666


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      +|                  +|+||+.+|++.++++|+++++++||++++++.|||+++ +..+++++++|||+|+|++|
T Consensus       119 ~G------------------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG  179 (340)
T 3s2e_A          119 NG------------------GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLG  179 (340)
T ss_dssp             CC------------------SSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTH
T ss_pred             CC------------------cceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHH
Confidence            65                  999999999999999999999999999999999999988 77899999999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+.+|+ +|++++++++++++++++|+++++++++   .++.+.+++ +.+ ++|++||++++...++.+++++
T Consensus       180 ~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~~~~~~~~-~~g-~~d~vid~~g~~~~~~~~~~~l  253 (340)
T 3s2e_A          180 HVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD---TDPAAWLQK-EIG-GAHGVLVTAVSPKAFSQAIGMV  253 (340)
T ss_dssp             HHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTT---SCHHHHHHH-HHS-SEEEEEESSCCHHHHHHHHHHE
T ss_pred             HHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCC---cCHHHHHHH-hCC-CCCEEEEeCCCHHHHHHHHHHh
Confidence            999999999999 9999999999999999999999999987   778888888 555 8999999999888899999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      +++ |+++.+|...+ ..+++...++.+++++.++...+   +++++++++++++|++++.   +++++|+++++||+.+
T Consensus       254 ~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~  325 (340)
T 3s2e_A          254 RRG-GTIALNGLPPG-DFGTPIFDVVLKGITIRGSIVGT---RSDLQESLDFAAHGDVKAT---VSTAKLDDVNDVFGRL  325 (340)
T ss_dssp             EEE-EEEEECSCCSS-EEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSCCCC---EEEECGGGHHHHHHHH
T ss_pred             ccC-CEEEEeCCCCC-CCCCCHHHHHhCCeEEEEEecCC---HHHHHHHHHHHHhCCCCce---EEEEeHHHHHHHHHHH
Confidence            998 99999998763 56677778888999999986543   5789999999999998763   4688999999999999


Q ss_pred             cCCCee-eEEEeC
Q 019822          324 KQPDCV-KVLITI  335 (335)
Q Consensus       324 ~~~~~~-k~vi~~  335 (335)
                      .+++.. |+|+++
T Consensus       326 ~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          326 REGKVEGRVVLDF  338 (340)
T ss_dssp             HTTCCCSEEEEEC
T ss_pred             HcCCCceEEEEec
Confidence            988865 999874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=2.9e-49  Score=363.41  Aligned_cols=297  Identities=24%  Similarity=0.335  Sum_probs=260.3

Q ss_pred             EEeEeecCCC---CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc
Q 019822            6 TLISFALKDS---QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM   82 (335)
Q Consensus         6 d~~~~~g~~~---~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~   82 (335)
                      |++.+.|.++   ...+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|++|++++|.+...  +|..
T Consensus        41 D~~~~~g~~~~~~~~~~p~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~  116 (343)
T 2dq4_A           41 DLHIWKWDAWARGRIRPPLVTG-HEF-SGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQI--LGVD  116 (343)
T ss_dssp             HHHHHTTCHHHHHHCCSSEECC-CEE-EEEEEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE--BTTT
T ss_pred             hHHHHcCCCCccccCCCCCcCC-ccc-eEEEEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce--ecCC
Confidence            4555666655   246799999 999 99999999999999999999999999999999999999999998755  3554


Q ss_pred             cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                      .+|                  +|+||+.+|++.++++|+++++++||++. ++.|||+++.+.+++ ++++|||+|+|++
T Consensus       117 ~~G------------------~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~v  176 (343)
T 2dq4_A          117 RDG------------------GFAEYVVVPAENAWVNPKDLPFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPI  176 (343)
T ss_dssp             BCC------------------SSBSEEEEEGGGEEEECTTSCHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHH
T ss_pred             CCC------------------cceeEEEEchHHeEECCCCCCHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHH
Confidence            444                  99999999999999999999999999874 788999998547889 9999999999999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |++++|+|+.+|+++|++++++++++++++++ +++++++++   .++.+.+++++ +.++|+|||++|++..++.++++
T Consensus       177 G~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~---~~~~~~~~~~~-~~g~D~vid~~g~~~~~~~~~~~  251 (343)
T 2dq4_A          177 GLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE---EDLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMA  251 (343)
T ss_dssp             HHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT---SCHHHHHHHHH-SSCEEEEEECSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc---cCHHHHHHHhc-CCCCCEEEECCCCHHHHHHHHHH
Confidence            99999999999987899999999999999999 999999887   77888899888 66999999999996688999999


Q ss_pred             hccCCeEEEEEccCCCccccchh-HHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVDAMVPLNV-IALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      ++++ |+++.+|... ...+++. ..++.+++++.|+....  ..++++++++++++|++++.++++++|||+++++||+
T Consensus       252 l~~~-G~iv~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~  327 (343)
T 2dq4_A          252 LIPG-GEARILGIPS-DPIRFDLAGELVMRGITAFGIAGRR--LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFG  327 (343)
T ss_dssp             EEEE-EEEEECCCCS-SCEEECHHHHTGGGTCEEEECCSCC--TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHH
T ss_pred             HhcC-CEEEEEecCC-CCceeCcHHHHHhCceEEEEeecCC--CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHH
Confidence            9997 9999999865 3456776 67778999999875431  3567899999999999988888999999999999999


Q ss_pred             HhcCCCeeeEEEeC
Q 019822          322 LLKQPDCVKVLITI  335 (335)
Q Consensus       322 ~~~~~~~~k~vi~~  335 (335)
                      .+.+++..|+++++
T Consensus       328 ~~~~~~~gKvv~~~  341 (343)
T 2dq4_A          328 LLASGQAVKVILDP  341 (343)
T ss_dssp             HHHHSSCSEEEEET
T ss_pred             HHhcCCceEEEEee
Confidence            99876668999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=1.1e-47  Score=354.68  Aligned_cols=287  Identities=21%  Similarity=0.300  Sum_probs=252.7

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cCCCccccccCcee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKL   96 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~   96 (335)
                      .+|.++| ||+ +|+|+++|++|++|++||||++.+...|+.|++|++|+++.|.+..+  +|.. .+|           
T Consensus        62 ~~p~v~G-~E~-~G~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~~~G-----------  126 (356)
T 1pl8_A           62 KKPMVLG-HEA-SGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF--CATPPDDG-----------  126 (356)
T ss_dssp             SSCEECC-CEE-EEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE--TTBTTBCC-----------
T ss_pred             CCCcccc-cce-EEEEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccc--cCcCCCCC-----------
Confidence            5789999 999 99999999999999999999999999999999999999999998655  3432 233           


Q ss_pred             ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA  176 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~  176 (335)
                             +|+||+.+|++.++++|+++++++||++ .+++|||+++ ++++++++++|||+|+|++|++++|+|+.+|++
T Consensus       127 -------~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~  197 (356)
T 1pl8_A          127 -------NLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAA  197 (356)
T ss_dssp             -------SCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCS
T ss_pred             -------ccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence                   9999999999999999999999998876 4888999988 788999999999999999999999999999998


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +|++++++++++++++++|++++++++..+..++.+.+++.++ +++|+|||++|++..+..++++++++ |+++.+|..
T Consensus       198 ~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~  275 (356)
T 1pl8_A          198 QVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLG  275 (356)
T ss_dssp             EEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHT-SCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCC
T ss_pred             EEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecC
Confidence            8999999999999999999999998871001567788888877 58999999999987789999999998 999999975


Q ss_pred             CCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          257 VDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      . ...+++...++.+++++.++...    ..++++++++++++++++.++++++|||+++++||+.+.++...|+|+++
T Consensus       276 ~-~~~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~  349 (356)
T 1pl8_A          276 S-EMTTVPLLHAAIREVDIKGVFRY----CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKC  349 (356)
T ss_dssp             C-SCCCCCHHHHHHTTCEEEECCSC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             C-CCCccCHHHHHhcceEEEEeccc----HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCCCceEEEEeC
Confidence            4 34567777788899999987532    46799999999999998888899999999999999999888445999874

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1.7e-48  Score=359.53  Aligned_cols=302  Identities=22%  Similarity=0.296  Sum_probs=258.8

Q ss_pred             EEe-EeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc-cccccc
Q 019822            6 TLI-SFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-LNGLML   83 (335)
Q Consensus         6 d~~-~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~-~~g~~~   83 (335)
                      |++ .+.|.++. .+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|+.|+++.|...... .++...
T Consensus        40 D~~~~~~g~~~~-~~p~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~  116 (352)
T 3fpc_A           40 DIHTVFEGAIGE-RHNMILG-HEA-VGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVK  116 (352)
T ss_dssp             HHHHHHSCTTCC-CSSEECC-CEE-EEEEEEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTB
T ss_pred             chHHHhCCCCCC-CCCcccC-Ccc-eEEEEEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCC
Confidence            444 44676654 5799999 999 999999999999999999999999999999999999999999764321 012223


Q ss_pred             CCCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT  161 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~  161 (335)
                      +                  |+|+||+.+++.  .++++|+++++++||+++++++|||+++ ++++++++++|||+|+|+
T Consensus       117 ~------------------G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~  177 (352)
T 3fpc_A          117 D------------------GVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGP  177 (352)
T ss_dssp             C------------------CSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSH
T ss_pred             C------------------CcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCH
Confidence            3                  499999999976  9999999999999999988999999987 789999999999999999


Q ss_pred             HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822          162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE  241 (335)
Q Consensus       162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~  241 (335)
                      +|++++|+|+++|+++|++++++++++++++++|+++++++++   .++.+.++++++++++|+|||++|++..++.+++
T Consensus       178 vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~  254 (352)
T 3fpc_A          178 VGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN---GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVK  254 (352)
T ss_dssp             HHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGG---SCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHH
T ss_pred             HHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCC---cCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHH
Confidence            9999999999999978999999999999999999999999987   7899999999999899999999999768999999


Q ss_pred             hhccCCeEEEEEccCCC-ccccchhHH--HhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEee-chhHH
Q 019822          242 TTKVGKGKVIVIGVGVD-AMVPLNVIA--LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVK-LEEID  317 (335)
Q Consensus       242 ~l~~~~G~~v~~g~~~~-~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-l~~~~  317 (335)
                      +++++ |+++.+|.... ...+++...  +.++++++.++....  .+.+++++++++++|++++.++++++|+ |++++
T Consensus       255 ~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~  331 (352)
T 3fpc_A          255 MIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG--GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIE  331 (352)
T ss_dssp             HEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCC--HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHH
T ss_pred             HHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEeeccC--chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHH
Confidence            99998 99999997654 333333322  335788888875321  2457899999999999999989999999 99999


Q ss_pred             HHHHHhcCCC-e-eeEEEeC
Q 019822          318 KAIQLLKQPD-C-VKVLITI  335 (335)
Q Consensus       318 ea~~~~~~~~-~-~k~vi~~  335 (335)
                      +||+.+.+++ . .|+|+++
T Consensus       332 ~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          332 KAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             HHHHHHHSCCTTCSEEEEEC
T ss_pred             HHHHHHHhCCCCcEEEEEEe
Confidence            9999998754 3 5999875

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=3.9e-48  Score=356.18  Aligned_cols=297  Identities=21%  Similarity=0.314  Sum_probs=255.9

Q ss_pred             EEeEeecCCCC--CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc-c--cc
Q 019822            6 TLISFALKDSQ--RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA-L--NG   80 (335)
Q Consensus         6 d~~~~~g~~~~--~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~-~--~g   80 (335)
                      |++.++|.++.  ..+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|++|.++.|...... .  .|
T Consensus        41 D~~~~~g~~~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g  118 (345)
T 3jv7_A           41 DIFVMDMPAAQYAYGLPLTLG-HEG-VGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPG  118 (345)
T ss_dssp             HHHHHHSCTTTCCSCSSEECC-SEE-EEEEEEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBT
T ss_pred             HHHHHcCCCCccCCCCCcccC-ccc-EEEEEEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCC
Confidence            45566676553  46899999 999 999999999999999999999999999999999999999999433221 0  13


Q ss_pred             cccCCCccccccCceeecccccccceeeEEec-ccceEEcCCCCCcccccccccchhhhhHHHHH-hcCCCCCCEEEEEc
Q 019822           81 LMLDSTSRMSVRGQKLYHIFSCSTWSEYMVID-ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK-EAKVEKGSSVAVLG  158 (335)
Q Consensus        81 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~~~~~VlI~G  158 (335)
                      ...+                  |+|+||+.+| ++.++++|+ +++++||+++++++|||+++.+ ...++++++|||+|
T Consensus       119 ~~~~------------------G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~G  179 (345)
T 3jv7_A          119 LGSP------------------GSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIG  179 (345)
T ss_dssp             TTBC------------------CSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEEC
T ss_pred             cCCC------------------ceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEEC
Confidence            3333                  3999999999 999999999 9999999999999999999866 44899999999999


Q ss_pred             CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHH
Q 019822          159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSE  238 (335)
Q Consensus       159 ~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~  238 (335)
                      +|++|++++|+|+.+|..+|++++++++++++++++|++++++++    .++.+.++++++++++|+|||++|++..++.
T Consensus       180 aG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~----~~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~  255 (345)
T 3jv7_A          180 VGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSG----AGAADAIRELTGGQGATAVFDFVGAQSTIDT  255 (345)
T ss_dssp             CSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECS----TTHHHHHHHHHGGGCEEEEEESSCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCC----CcHHHHHHHHhCCCCCeEEEECCCCHHHHHH
Confidence            999999999999999444999999999999999999999999886    3688899999998899999999999878899


Q ss_pred             HHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822          239 ALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK  318 (335)
Q Consensus       239 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e  318 (335)
                      ++++++++ |+++.+|...+...+++. .++.+++++.++...+   .+++.++++++++|++++   ++++|+|+++++
T Consensus       256 ~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~  327 (345)
T 3jv7_A          256 AQQVVAVD-GHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGT---RSELMEVVALARAGRLDI---HTETFTLDEGPA  327 (345)
T ss_dssp             HHHHEEEE-EEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCC---HHHHHHHHHHHHTTCCCC---CEEEECSTTHHH
T ss_pred             HHHHHhcC-CEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCC---HHHHHHHHHHHHcCCCce---EEEEEcHHHHHH
Confidence            99999998 999999987643455554 6677999999886543   578999999999999876   458999999999


Q ss_pred             HHHHhcCCCee-eEEEeC
Q 019822          319 AIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       319 a~~~~~~~~~~-k~vi~~  335 (335)
                      ||+.+.+++.. |+|+.+
T Consensus       328 A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          328 AYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             HHHHHHHTCCSSEEEECC
T ss_pred             HHHHHHcCCCceeEEeCC
Confidence            99999888765 999864

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=1.1e-47  Score=355.60  Aligned_cols=287  Identities=22%  Similarity=0.288  Sum_probs=252.5

Q ss_pred             CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cCCCccccccCce
Q 019822           17 RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQK   95 (335)
Q Consensus        17 ~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~   95 (335)
                      ..+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|++|.++.|.+..+  .|.. .+           
T Consensus        70 ~~~p~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~--~g~~~~~-----------  134 (363)
T 3m6i_A           70 VECDHVLG-HES-AGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDF--LSTPPVP-----------  134 (363)
T ss_dssp             CCSCEECC-CEE-EEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE--TTSTTSC-----------
T ss_pred             CCCCcccC-cce-EEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccc--cCCCCCC-----------
Confidence            36799999 999 99999999999999999999999999999999999999999998766  3433 33           


Q ss_pred             eecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC
Q 019822           96 LYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA  175 (335)
Q Consensus        96 ~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~  175 (335)
                             |+|+||+.+|++.++++|+ +++++||++. ++.|||+++ ++++++++++|||+|+|++|++++|+|+.+|+
T Consensus       135 -------G~~aey~~v~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga  204 (363)
T 3m6i_A          135 -------GLLRRYVNHPAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGA  204 (363)
T ss_dssp             -------CSCBSEEEEEGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTC
T ss_pred             -------ccceeEEEEehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence                   3999999999999999999 9999999884 889999998 88999999999999999999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceEeCCC--CCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          176 AKIIGIDKNPWKKEKGKAFGMTDFINPD--DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       176 ~~V~~~~~~~~~~~~~~~lga~~v~~~~--~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ++|++++++++++++++++ ++.++++.  .....++.+.++++++++++|+||||+|++..+..++++++++ |+++.+
T Consensus       205 ~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~  282 (363)
T 3m6i_A          205 CPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVI  282 (363)
T ss_dssp             CSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEEC
T ss_pred             CEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEE
Confidence            5599999999999999999 66655432  1112678899999998889999999999987889999999998 999999


Q ss_pred             ccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCC-C-eeeE
Q 019822          254 GVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP-D-CVKV  331 (335)
Q Consensus       254 g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~-~-~~k~  331 (335)
                      |.... ...++...++.+++++.++...    .++++++++++++|++++.++++++|||+++++||+.+.++ . ..|+
T Consensus       283 G~~~~-~~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kv  357 (363)
T 3m6i_A          283 GVGKN-EIQIPFMRASVREVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKV  357 (363)
T ss_dssp             CCCCS-CCCCCHHHHHHHTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEE
T ss_pred             ccCCC-CccccHHHHHhcCcEEEEccCC----HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEE
Confidence            98663 4567777888899999987633    57899999999999999888999999999999999999886 3 3599


Q ss_pred             EEeC
Q 019822          332 LITI  335 (335)
Q Consensus       332 vi~~  335 (335)
                      +++.
T Consensus       358 vi~~  361 (363)
T 3m6i_A          358 QIQS  361 (363)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            9863

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=6.2e-48  Score=354.58  Aligned_cols=297  Identities=22%  Similarity=0.327  Sum_probs=259.3

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|+.|.++.|.+...  +|+..+
T Consensus        43 D~~~~~g~~~~~~~~p~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~--~G~~~~  118 (343)
T 2eih_A           43 DVWVRKGVASPKLPLPHVLG-ADG-SGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQI--LGEHRH  118 (343)
T ss_dssp             HHHHHHTSSSTTCCSSEECC-SEE-EEEEEEECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE--TTTSSC
T ss_pred             HHHHhcCCCCCCCCCCcccc-cce-EEEEEEECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccc--cCcCCC
Confidence            55566676654 46899999 999 99999999999999999999999999999999999999999998765  455444


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG  163 (335)
                      |                  +|+||+.+|++.++++|+++++++||++++++.|||+++.+.++++++++|||+|+ |++|
T Consensus       119 G------------------~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG  180 (343)
T 2eih_A          119 G------------------TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVS  180 (343)
T ss_dssp             C------------------SSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTH
T ss_pred             c------------------cceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHH
Confidence            4                  99999999999999999999999999899999999999866678999999999998 9999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+++..|+ +|+++++++++++.++++|+++++++.+   .++.+.+++.+++.++|++||++|.. .++.+++++
T Consensus       181 ~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l  255 (343)
T 2eih_A          181 VAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH---PDWPKEVRRLTGGKGADKVVDHTGAL-YFEGVIKAT  255 (343)
T ss_dssp             HHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTS---TTHHHHHHHHTTTTCEEEEEESSCSS-SHHHHHHHE
T ss_pred             HHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCc---ccHHHHHHHHhCCCCceEEEECCCHH-HHHHHHHhh
Confidence            999999999999 9999999999999999999999998877   67888888888777899999999954 789999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      +++ |+++.+|.......+++...++.+++++.|+...   ..++++++++++++|+++  +.++++|||+++++||+.+
T Consensus       256 ~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~  329 (343)
T 2eih_A          256 ANG-GRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMA---SKSRLFPILRFVEEGKLK--PVVGQVLPLEAAAEGHRLL  329 (343)
T ss_dssp             EEE-EEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSC---CGGGHHHHHHHHHHTSSC--CCEEEEEEGGGHHHHHHHH
T ss_pred             ccC-CEEEEEecCCCCcCccCHHHHHhCCcEEEEecCc---cHHHHHHHHHHHHcCCCC--CceeEEeeHHHHHHHHHHH
Confidence            997 9999999876432346666677799999987532   357799999999999975  4578999999999999999


Q ss_pred             cCCCe-eeEEEeC
Q 019822          324 KQPDC-VKVLITI  335 (335)
Q Consensus       324 ~~~~~-~k~vi~~  335 (335)
                      .+++. .|+++++
T Consensus       330 ~~~~~~gKvvv~~  342 (343)
T 2eih_A          330 EERRVFGKVVLQV  342 (343)
T ss_dssp             HTTCSSSEEEEEC
T ss_pred             HcCCCceEEEEec
Confidence            88765 4999874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.5e-47  Score=350.02  Aligned_cols=285  Identities=24%  Similarity=0.371  Sum_probs=250.6

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cCCCccccccCcee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQKL   96 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~~   96 (335)
                      .+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|++|.++.|.+..+  .|.. .+            
T Consensus        59 ~~p~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~~~------------  122 (352)
T 1e3j_A           59 KDPMVIG-HEA-SGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTF--CATPPDD------------  122 (352)
T ss_dssp             CSCEECC-CEE-EEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE--TTBTTBC------------
T ss_pred             CCCcccc-ccc-eEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcc--cCcCCCC------------
Confidence            5799999 999 99999999999999999999999999999999999999999998655  3432 23            


Q ss_pred             ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAA  176 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~  176 (335)
                            |+|+||+.+|++.++++|+++++++||++ .++.|||+++ +.++++++++|||+|+|++|++++|+|+.+|+ 
T Consensus       123 ------G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-  193 (352)
T 1e3j_A          123 ------GNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-  193 (352)
T ss_dssp             ------CSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-
T ss_pred             ------ccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence                  39999999999999999999999999876 4888999988 78899999999999999999999999999999 


Q ss_pred             EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhC---CCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          177 KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH---GMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       177 ~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~---g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      +|++++++++++++++++|+++++++++  ..++.+.+++.++   +.++|+|||++|+...++.++++++++ |+++.+
T Consensus       194 ~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~  270 (352)
T 1e3j_A          194 FVVCTARSPRRLEVAKNCGADVTLVVDP--AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLV  270 (352)
T ss_dssp             EEEEEESCHHHHHHHHHTTCSEEEECCT--TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHhCCCEEEcCcc--cccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEE
Confidence            7999999999999999999999998762  1356677777775   568999999999887789999999997 999999


Q ss_pred             ccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCC--eeeE
Q 019822          254 GVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPD--CVKV  331 (335)
Q Consensus       254 g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~--~~k~  331 (335)
                      |... ...+++...++.+++++.++...    ..++++++++++++++++.++++++|||+++++||+.+.+++  ..|+
T Consensus       271 G~~~-~~~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kv  345 (352)
T 1e3j_A          271 GMGS-QMVTVPLVNACAREIDIKSVFRY----CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKV  345 (352)
T ss_dssp             SCCS-SCCCCCHHHHHTTTCEEEECCSC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEE
T ss_pred             ecCC-CCccccHHHHHhcCcEEEEeccc----hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEE
Confidence            9754 34567777788899999987532    467999999999999988888999999999999999998775  4599


Q ss_pred             EEeC
Q 019822          332 LITI  335 (335)
Q Consensus       332 vi~~  335 (335)
                      |+++
T Consensus       346 vi~~  349 (352)
T 1e3j_A          346 MISC  349 (352)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            9874

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.2e-48  Score=360.25  Aligned_cols=304  Identities=26%  Similarity=0.329  Sum_probs=256.9

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCC------cccCCCEEEecccCCCCCCcccc-cCCCCCCcCccccc
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVK------EVKEGDIVIPTYIGECKECENCT-SEMTNLCLKYPIAL   78 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~-~g~~~~c~~~~~~~   78 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++| +|+      +|++||+|++.+...|+.|++|+ .|.++.|.+...  
T Consensus        58 D~~~~~G~~~~~~~P~v~G-hE~-~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~--  132 (380)
T 1vj0_A           58 DVHMFRGEDPRVPLPIILG-HEG-AGRVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV--  132 (380)
T ss_dssp             HHHHHTTCCTTCCSSBCCC-CEE-EEEEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE--
T ss_pred             chHHhcCCCCCCCCCcccC-cCc-EEEEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcce--
Confidence            5556677666456899999 999 99999999 999      99999999999999999999999 999999987644  


Q ss_pred             cccccCCCccccccCceeecccccccceeeEEe-cccceEEcCCCCCcc-cccccccchhhhhHHHHHhcC-CCCCCEEE
Q 019822           79 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVI-DANYVVKVDPSIDPS-DASFLSCGFTTGYGAAWKEAK-VEKGSSVA  155 (335)
Q Consensus        79 ~g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v-~~~~~~~lp~~~~~~-~aa~l~~~~~ta~~~l~~~~~-~~~~~~Vl  155 (335)
                      +|......        .  .....|+|+||+.+ |++.++++|++++++ +|+++. +++|||+++ +.++ ++++++||
T Consensus       133 ~g~~~~~~--------~--~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~Vl  200 (380)
T 1vj0_A          133 YGINRGCS--------E--YPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVV  200 (380)
T ss_dssp             TTTTCCSS--------S--TTCCCSSSBSEEEECTTCCEEEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEE
T ss_pred             eccccccC--------C--CCCCCccccceEEEcccceEEECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEE
Confidence            34310000        0  00002499999999 999999999999999 677666 999999998 6788 99999999


Q ss_pred             EEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCC---CCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          156 VLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD---DEPNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       156 I~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~---~~~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      |+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++++   +   .++.+.++++++++++|+|||++|+
T Consensus       201 V~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~~~~v~~~~~g~g~Dvvid~~g~  277 (380)
T 1vj0_A          201 IQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSV---EERRKAIMDITHGRGADFILEATGD  277 (380)
T ss_dssp             EECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCH---HHHHHHHHHHTTTSCEEEEEECSSC
T ss_pred             EECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCc---chHHHHHHHHhCCCCCcEEEECCCC
Confidence            999999999999999999944999999999999999999999999987   5   7788899999888899999999998


Q ss_pred             hHHHHHHHHhhccCCeEEEEEccCC-CccccchhHH-HhhcCcEEEEeeccCCCCcCcHHHHHHHHhC--CCCCCCCcee
Q 019822          233 PSLLSEALETTKVGKGKVIVIGVGV-DAMVPLNVIA-LACGGRTLKGTTFGGIKTKSDLPTLLDKCKN--KEFKLHQLLT  308 (335)
Q Consensus       233 ~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~  308 (335)
                      +..+..++++++++ |+++.+|... +...+++... ++.+++++.|+..++   .++++++++++++  |++  .++++
T Consensus       278 ~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~~~g~l--~~~i~  351 (380)
T 1vj0_A          278 SRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD---TSHFVKTVSITSRNYQLL--SKLIT  351 (380)
T ss_dssp             TTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC---HHHHHHHHHHHHTCHHHH--GGGCC
T ss_pred             HHHHHHHHHHHhcC-CEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecCC---HHHHHHHHHHHHhhcCCe--eeEEE
Confidence            66889999999998 9999999875 3245677777 778999999976543   5678999999999  986  55688


Q ss_pred             EEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          309 HHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       309 ~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      ++|||+++++||+.+.+++..|+|+++
T Consensus       352 ~~~~l~~~~~A~~~~~~~~~~Kvvl~~  378 (380)
T 1vj0_A          352 HRLPLKEANKALELMESREALKVILYP  378 (380)
T ss_dssp             EEEEGGGHHHHHHHHHHTSCSCEEEEC
T ss_pred             EEEeHHHHHHHHHHHhcCCCceEEEEe
Confidence            899999999999998776544998864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=2.7e-47  Score=349.75  Aligned_cols=293  Identities=23%  Similarity=0.355  Sum_probs=255.5

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|++|++||+|++.+. ..|+.|++|++|+++.|.+...  .|+..
T Consensus        41 D~~~~~g~~~~~~~~p~v~G-hE~-~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~  116 (339)
T 1rjw_A           41 DLHAAHGDWPVKPKLPLIPG-HEG-VGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN--AGYSV  116 (339)
T ss_dssp             HHHHHHTCSSSCCCSSBCCC-SCE-EEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEE--BTTTB
T ss_pred             hHHHhcCCCCcCCCCCeecc-ccc-eEEEEEECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcce--eecCC
Confidence            55556676663 46899999 999 9999999999999999999998764 4699999999999999997655  35555


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      +|                  +|+||+.+|++.++++|+++++++||++++++.|||+++.+ .+++++++|||+|+|++|
T Consensus       117 ~G------------------~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG  177 (339)
T 1rjw_A          117 DG------------------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGIGGLG  177 (339)
T ss_dssp             CC------------------SSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECCSTTH
T ss_pred             CC------------------cceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHH
Confidence            55                  99999999999999999999999999999999999999854 589999999999998899


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+.+|+ +|+++++++++++.++++|+++++++++   .++.+.+++.+ + ++|++||++|.+..++.+++++
T Consensus       178 ~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~---~~~~~~~~~~~-~-~~d~vid~~g~~~~~~~~~~~l  251 (339)
T 1rjw_A          178 HVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLK---EDAAKFMKEKV-G-GVHAAVVTAVSKPAFQSAYNSI  251 (339)
T ss_dssp             HHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTT---SCHHHHHHHHH-S-SEEEEEESSCCHHHHHHHHHHE
T ss_pred             HHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCC---ccHHHHHHHHh-C-CCCEEEECCCCHHHHHHHHHHh
Confidence            999999999999 9999999999999999999999999886   67888888877 4 8999999999876889999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHh
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL  323 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~  323 (335)
                      +++ |+++.+|...+ ..+++...++.+++++.|+....   .++++++++++.++++++.   +++|||+++++||+.+
T Consensus       252 ~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~  323 (339)
T 1rjw_A          252 RRG-GACVLVGLPPE-EMPIPIFDTVLNGIKIIGSIVGT---RKDLQEALQFAAEGKVKTI---IEVQPLEKINEVFDRM  323 (339)
T ss_dssp             EEE-EEEEECCCCSS-EEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHH
T ss_pred             hcC-CEEEEecccCC-CCccCHHHHHhCCcEEEEeccCC---HHHHHHHHHHHHcCCCCcc---EEEEcHHHHHHHHHHH
Confidence            997 99999998764 45677777788999999876432   4678999999999998764   4789999999999999


Q ss_pred             cCCCe-eeEEEeC
Q 019822          324 KQPDC-VKVLITI  335 (335)
Q Consensus       324 ~~~~~-~k~vi~~  335 (335)
                      .+++. .|+|+++
T Consensus       324 ~~~~~~gKvvi~~  336 (339)
T 1rjw_A          324 LKGQINGRVVLTL  336 (339)
T ss_dssp             HTTCCSSEEEEEC
T ss_pred             HcCCCceEEEEec
Confidence            88764 5999864

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=1.2e-47  Score=360.07  Aligned_cols=281  Identities=23%  Similarity=0.370  Sum_probs=250.9

Q ss_pred             CCccccccccccceEEEEEeCCCC------CcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCcccc
Q 019822           17 RLFILVFSGTKVSGKVVESAGDEV------KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMS   90 (335)
Q Consensus        17 ~~~p~v~G~~e~~~G~V~~vG~~v------~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~   90 (335)
                      ..+|.++| ||+ +|+|+++|++|      ++|++||+|++.+...|+.|++|++|+++.|.+...  +|+..+|     
T Consensus        89 ~~~P~i~G-~E~-~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~g~~~~G-----  159 (404)
T 3ip1_A           89 TGFPVTLG-HEF-SGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNE--LGFNVDG-----  159 (404)
T ss_dssp             BCSSEECC-CEE-EEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEE--BTTTBCC-----
T ss_pred             CCCCcccC-ccc-eEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccc--cCCCCCC-----
Confidence            36899999 999 99999999999      889999999999999999999999999999998765  4666665     


Q ss_pred             ccCceeecccccccceeeEEecccceEEcCCCCCc------ccccccccchhhhhHHHHHhc-CCCCCCEEEEEcCCHHH
Q 019822           91 VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDP------SDASFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        91 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~------~~aa~l~~~~~ta~~~l~~~~-~~~~~~~VlI~G~g~vG  163 (335)
                                   +|+||+.+|++.++++|+++++      .++|+++.+++|||+++.... +++++++|||+|+|++|
T Consensus       160 -------------~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG  226 (404)
T 3ip1_A          160 -------------AFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIG  226 (404)
T ss_dssp             -------------SSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHH
T ss_pred             -------------CCcceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHH
Confidence                         9999999999999999998864      447888889999999986554 89999999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh-HHHHHHHHh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALET  242 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~-~~~~~~~~~  242 (335)
                      ++++|+|+.+|+++|++++++++++++++++|+++++++++   .++.+.++++++++++|+||||+|++ ..+..++++
T Consensus       227 ~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~  303 (404)
T 3ip1_A          227 LAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTK---ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEV  303 (404)
T ss_dssp             HHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTT---SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCC---CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHH
Confidence            99999999999989999999999999999999999999987   78999999999999999999999997 356777777


Q ss_pred             h----ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822          243 T----KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDK  318 (335)
Q Consensus       243 l----~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~e  318 (335)
                      +    +++ |+++.+|.... ..+++...++.+++++.|+....  ...+++.+++++++| +++.++++++|+|+++++
T Consensus       304 l~~~~~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~  378 (404)
T 3ip1_A          304 IWRARGIN-ATVAIVARADA-KIPLTGEVFQVRRAQIVGSQGHS--GHGTFPRVISLMASG-MDMTKIISKTVSMEEIPE  378 (404)
T ss_dssp             HHHCSCCC-CEEEECSCCCS-CEEECHHHHHHTTCEEEECCCCC--STTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHH
T ss_pred             HHhccCCC-cEEEEeCCCCC-CCcccHHHHhccceEEEEecCCC--chHHHHHHHHHHHcC-CChhheEEEEeeHHHHHH
Confidence            7    997 99999998764 55778888888999999886322  257899999999999 988888999999999999


Q ss_pred             HHHHhcCCC
Q 019822          319 AIQLLKQPD  327 (335)
Q Consensus       319 a~~~~~~~~  327 (335)
                      ||+.+..++
T Consensus       379 A~~~~~~GK  387 (404)
T 3ip1_A          379 YIKRLQTDK  387 (404)
T ss_dssp             HHHHTTTCT
T ss_pred             HHHHHhCCc
Confidence            999998553

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=4.2e-47  Score=349.75  Aligned_cols=295  Identities=26%  Similarity=0.354  Sum_probs=262.8

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |+++++|.++. .+|.++| ||+ +|+|+++|++|++|++||+|++.+. ..|+.|.+|..+.++.|.....  .+...+
T Consensus        42 D~~~~~G~~~~-~~p~i~G-hE~-aG~V~~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~  116 (348)
T 4eez_A           42 DLHVAAGDFGN-KAGTVLG-HEG-IGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKN--AGYSVD  116 (348)
T ss_dssp             HHHHHTTTTCC-CTTCBCC-SEE-EEEEEEECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEE--BTTTBC
T ss_pred             HHHHhcCCCCC-CCCcccc-eeE-EEEEEEECceeeecccCCeEeecccccccCccccccCCcccccccccc--cccccC
Confidence            66777888764 5899999 999 9999999999999999999987764 4678899999999999998766  355555


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      |                  +|+||+.++++.++++|+++++++||++++++.|||+++ +.++++++++|||+|+|++|.
T Consensus       117 G------------------~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~  177 (348)
T 4eez_A          117 G------------------GMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGN  177 (348)
T ss_dssp             C------------------SSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHH
T ss_pred             C------------------cceeeccccccceeecCCCCCHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccH
Confidence            5                  999999999999999999999999999999999999987 678899999999999999999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+++.++..+|++++++++|+++++++|+++++|+++   .++.+.++++++++++|.+++++++...+..++++++
T Consensus       178 ~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~---~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~  254 (348)
T 4eez_A          178 LAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGD---VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLK  254 (348)
T ss_dssp             HHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-C---CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEE
T ss_pred             HHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCC---CCHHHHhhhhcCCCCceEEEEeccCcchhheeheeec
Confidence            9999999775449999999999999999999999999998   8899999999999999999999999888999999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhc
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK  324 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~  324 (335)
                      ++ |+++.+|.... ..+++...++.+++++.|+..++   +.+++++++++++|++++   ++++|||+++++||+.++
T Consensus       255 ~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~gs~~~~---~~~~~~~~~l~~~g~i~p---~~~~~~l~~~~~A~~~l~  326 (348)
T 4eez_A          255 PM-GKMVAVAVPNT-EMTLSVPTVVFDGVEVAGSLVGT---RLDLAEAFQFGAEGKVKP---IVATRKLEEINDIIDEMK  326 (348)
T ss_dssp             EE-EEEEECCCCSC-EEEECHHHHHHSCCEEEECCSCC---HHHHHHHHHHHHTTSCCC---CEEEECGGGHHHHHHHHH
T ss_pred             CC-ceEEEEeccCC-CCccCHHHHHhCCeEEEEEecCC---HHHHHHHHHHHHcCCCEE---EEEEEeHHHHHHHHHHHH
Confidence            98 99999998764 56677778888999999987554   578999999999999764   347899999999999999


Q ss_pred             CCCee-eEEEeC
Q 019822          325 QPDCV-KVLITI  335 (335)
Q Consensus       325 ~~~~~-k~vi~~  335 (335)
                      +++.. |+||+|
T Consensus       327 ~g~~~GKvVl~~  338 (348)
T 4eez_A          327 AGKIEGRMVIDF  338 (348)
T ss_dssp             TTCCSSEEEEEC
T ss_pred             CCCCccEEEEEc
Confidence            98865 999986

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=5.3e-47  Score=348.49  Aligned_cols=291  Identities=21%  Similarity=0.327  Sum_probs=236.7

Q ss_pred             EEeEeecCCC--CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDS--QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~--~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.+.|.++  ...+|.++| ||+ +|+|+++|++ ++|++||+|+..+...|+.|++|++|.++.|.+...  +|...
T Consensus        44 D~~~~~g~~~~~~~~~p~i~G-~E~-~G~V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~G~~~  118 (344)
T 2h6e_A           44 DLRVWKGVEAKQGFRLPIILG-HEN-AGTIVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQII--PGQTT  118 (344)
T ss_dssp             HHHHHTTSCCCTTCCSSEECC-CCE-EEEEEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC--BTTTB
T ss_pred             hHHHHcCCCcccCCCCCcccc-ccc-eEEEEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccc--ccccc
Confidence            5556667666  346899999 999 9999999999 999999999988888999999999999999987644  45544


Q ss_pred             CCCccccccCceeecccccccceeeEEec-ccceEEcCCCCCcccccccccchhhhhHHHHHh----cCCCCCCEEEEEc
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVID-ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE----AKVEKGSSVAVLG  158 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~----~~~~~~~~VlI~G  158 (335)
                      +|                  +|+||+.+| ++.++++ +++++++||++++++.|||+++...    .++ ++++|||+|
T Consensus       119 ~G------------------~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~G  178 (344)
T 2h6e_A          119 NG------------------GFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNG  178 (344)
T ss_dssp             CC------------------SSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEEC
T ss_pred             CC------------------cceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEEC
Confidence            44                  999999999 9999999 9999999999999999999998654    288 999999999


Q ss_pred             CCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHH
Q 019822          159 LGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLL  236 (335)
Q Consensus       159 ~g~vG~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~  236 (335)
                      +|++|++++|+|+.+  |+ +|++++++++++++++++|+++++++++   .  .+.++++++++++|+|||++|++..+
T Consensus       179 aG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~--~~~~~~~~~g~g~D~vid~~g~~~~~  252 (344)
T 2h6e_A          179 IGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKD---A--ESLINKLTDGLGASIAIDLVGTEETT  252 (344)
T ss_dssp             CSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHH---H--HHHHHHHHTTCCEEEEEESSCCHHHH
T ss_pred             CCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEecccc---c--hHHHHHhhcCCCccEEEECCCChHHH
Confidence            999999999999999  99 8999999999999999999999997652   1  22345566666899999999998788


Q ss_pred             HHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhH
Q 019822          237 SEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI  316 (335)
Q Consensus       237 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~  316 (335)
                      +.++++++++ |+++.+|.... ..+++...++.+++++.++...+   .+++++++++++++++++.  + ++|||+++
T Consensus       253 ~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~  324 (344)
T 2h6e_A          253 YNLGKLLAQE-GAIILVGMEGK-RVSLEAFDTAVWNKKLLGSNYGS---LNDLEDVVRLSESGKIKPY--I-IKVPLDDI  324 (344)
T ss_dssp             HHHHHHEEEE-EEEEECCCCSS-CCCCCHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSCCC--E-EEECC---
T ss_pred             HHHHHHhhcC-CEEEEeCCCCC-CcccCHHHHhhCCcEEEEEecCC---HHHHHHHHHHHHcCCCCcc--e-EEEeHHHH
Confidence            9999999997 99999998653 45677777778999999876432   4678999999999997654  6 89999999


Q ss_pred             HHHHHHhcCCCe-eeEEEeC
Q 019822          317 DKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       317 ~ea~~~~~~~~~-~k~vi~~  335 (335)
                      ++||+.+.+++. .|+|+++
T Consensus       325 ~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          325 NKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             -------------CEEEECC
T ss_pred             HHHHHHHHcCCCceEEEEeC
Confidence            999999988775 5999864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.6e-47  Score=358.64  Aligned_cols=303  Identities=18%  Similarity=0.232  Sum_probs=255.0

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccc------ccc
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPI------ALN   79 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~------~~~   79 (335)
                      |++.+.|.++ ..+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|++|.+++|.+...      ..+
T Consensus        48 D~~~~~G~~~-~~~p~v~G-hE~-~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~  124 (398)
T 2dph_A           48 DQHIYRGRFI-VPKGHVLG-HEI-TGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAF  124 (398)
T ss_dssp             HHHHHTTSSC-CCTTCBCC-CCE-EEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBT
T ss_pred             HHHHhcCCCC-CCCCcccC-Cce-EEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCcccccccccccc
Confidence            4555666543 35799999 999 99999999999999999999999999999999999999999987111      012


Q ss_pred             ccccCCCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCccc----ccccccchhhhhHHHHHhcCCCCCCE
Q 019822           80 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSD----ASFLSCGFTTGYGAAWKEAKVEKGSS  153 (335)
Q Consensus        80 g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~~~~  153 (335)
                      |+...               ...|+|+||+.++++  .++++|+++++++    ||+++++++|||+++ +.++++++++
T Consensus       125 G~~~~---------------~~~G~~aey~~v~~~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~  188 (398)
T 2dph_A          125 GFDLK---------------GWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSH  188 (398)
T ss_dssp             TTTBS---------------SCCCSSBSEEEESSHHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCE
T ss_pred             ccccC---------------CCCceeeeeEEeccccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCE
Confidence            22100               012499999999987  8999999999998    888988999999998 7899999999


Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhH-HHHHHhhhCCCCccEEEEcCCC
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSI-SELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~-~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      |||+|+|++|++++|+|+.+|+++|++++++++++++++++|++ ++++++   .++ .+.++++++++++|+|||++|+
T Consensus       189 VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~---~~~~~~~~~~~~~g~g~Dvvid~~g~  264 (398)
T 2dph_A          189 VYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE-TIDLRN---SAPLRDQIDQILGKPEVDCGVDAVGF  264 (398)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE-EEETTS---SSCHHHHHHHHHSSSCEEEEEECSCT
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EEcCCC---cchHHHHHHHHhCCCCCCEEEECCCC
Confidence            99999999999999999999988999999999999999999995 888876   565 7888888888899999999997


Q ss_pred             hH--------------HHHHHHHhhccCCeEEEEEccCC------------CccccchhHHHhhcCcEEEEeeccCCCCc
Q 019822          233 PS--------------LLSEALETTKVGKGKVIVIGVGV------------DAMVPLNVIALACGGRTLKGTTFGGIKTK  286 (335)
Q Consensus       233 ~~--------------~~~~~~~~l~~~~G~~v~~g~~~------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  286 (335)
                      ..              .+..++++++++ |+++.+|...            ....+++...++.+++++.++...   ..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~  340 (398)
T 2dph_A          265 EAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VT  340 (398)
T ss_dssp             TCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GG
T ss_pred             ccccccccccccccHHHHHHHHHHHhcC-CEEEEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cH
Confidence            52              689999999998 9999999762            123456666777899999876432   34


Q ss_pred             CcHHHHHHHHhCCCCC--CCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          287 SDLPTLLDKCKNKEFK--LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       287 ~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      ++++++++++++|+++  +.++++++|+|+++++||+.+.+++..|+|+++
T Consensus       341 ~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvv~~  391 (398)
T 2dph_A          341 NYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVIDP  391 (398)
T ss_dssp             GTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCSCEEEECT
T ss_pred             HHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCceEEEEec
Confidence            6789999999999988  777788999999999999999887668999864

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=3.8e-47  Score=349.98  Aligned_cols=295  Identities=22%  Similarity=0.347  Sum_probs=245.9

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|++.+ ...|+.|++|+.|.+++|. ...  .++..+
T Consensus        45 D~~~~~g~~~~~~~p~i~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~--~~~~~~  119 (348)
T 3two_A           45 DIHSAYSEWKEGIYPMIPG-HEI-AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT-KVV--FTYDCL  119 (348)
T ss_dssp             HHHHHTTSSSCCCSSBCCC-CCE-EEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCT-TCE--ESSSSE
T ss_pred             chhhhcCCCCCCCCCeecC-cce-eEEEEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCc-ccc--cccccc
Confidence            5566778877777899999 999 999999999999999999998865 4799999999999999998 322  233221


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      .   ....|     ....|+|+||+.+|++.++++|+++++++||++++++.|||+++ ++.+++++++|||+|+|++|+
T Consensus       120 ~---~~~~~-----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~  190 (348)
T 3two_A          120 D---SFHDN-----EPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPL-KFSKVTKGTKVGVAGFGGLGS  190 (348)
T ss_dssp             E---GGGTT-----EECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEESCSHHHH
T ss_pred             c---ccccC-----CcCCccccceEEechhhEEECCCCCCHHHhhhhhhhHHHHHHHH-HhcCCCCCCEEEEECCcHHHH
Confidence            0   00000     01124999999999999999999999999999999999999988 456999999999999999999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+|+.+|+ +|++++++++++++++++|+++++ .+.   ..    +    .. ++|+|||++|++..++.++++++
T Consensus       191 ~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~~~---~~----~----~~-~~D~vid~~g~~~~~~~~~~~l~  256 (348)
T 3two_A          191 MAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-TDP---KQ----C----KE-ELDFIISTIPTHYDLKDYLKLLT  256 (348)
T ss_dssp             HHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-SSG---GG----C----CS-CEEEEEECCCSCCCHHHHHTTEE
T ss_pred             HHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-CCH---HH----H----hc-CCCEEEECCCcHHHHHHHHHHHh
Confidence            99999999999 999999999999999999999988 332   21    1    12 89999999999877899999999


Q ss_pred             cCCeEEEEEccCCCcccc-chhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          245 VGKGKVIVIGVGVDAMVP-LNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      ++ |+++.+|.......+ ++...++ .+++++.|+..++   ..++.+++++++++++++.   +++|||+++++||+.
T Consensus       257 ~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~  329 (348)
T 3two_A          257 YN-GDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGG---IKETQEMVDFSIKHNIYPE---IDLILGKDIDTAYHN  329 (348)
T ss_dssp             EE-EEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCC---HHHHHHHHHHHHHTTCCCC---EEEECGGGHHHHHHH
T ss_pred             cC-CEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCC---HHHHHHHHHHHHhCCCCce---EEEEEHHHHHHHHHH
Confidence            98 999999987622333 6767777 8999999987543   4679999999999998773   479999999999999


Q ss_pred             hcCCCe-eeEEEeC
Q 019822          323 LKQPDC-VKVLITI  335 (335)
Q Consensus       323 ~~~~~~-~k~vi~~  335 (335)
                      +.+++. .|+|+++
T Consensus       330 ~~~~~~~gKvVi~~  343 (348)
T 3two_A          330 LTHGKAKFRYVIDM  343 (348)
T ss_dssp             HHTTCCCSEEEEEG
T ss_pred             HHcCCCceEEEEec
Confidence            998876 4999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=1.8e-46  Score=345.28  Aligned_cols=294  Identities=22%  Similarity=0.318  Sum_probs=255.5

Q ss_pred             EEeEeecCCC--------CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc
Q 019822            6 TLISFALKDS--------QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA   77 (335)
Q Consensus         6 d~~~~~g~~~--------~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~   77 (335)
                      |++.+.|.++        ...+|.++| ||+ +|+|+++|++|++|++||+|+..+...|+.|++|++|+++.|.+... 
T Consensus        41 D~~~~~g~~~~~~~~~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~-  117 (347)
T 1jvb_A           41 DVHMRQGRFGNLRIVEDLGVKLPVTLG-HEI-AGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW-  117 (347)
T ss_dssp             HHHHTTTEETTEETTTTTCCCSCEECC-CEE-EEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE-
T ss_pred             HHHHhcCCCcccccccccCCCCCcccc-ccc-eEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCccccc-
Confidence            4445555554        236799999 999 99999999999999999999988888999999999999999998654 


Q ss_pred             ccccccCCCccccccCceeecccccccceeeEEecc-cceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEE
Q 019822           78 LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDA-NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAV  156 (335)
Q Consensus        78 ~~g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI  156 (335)
                       +|+..+|                  +|+||+.+|+ +.++++ +++++++||++++++.|||+++ ++++++++++|||
T Consensus       118 -~G~~~~G------------------~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV  176 (347)
T 1jvb_A          118 -LGINFDG------------------AYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLV  176 (347)
T ss_dssp             -BTTTBCC------------------SSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEE
T ss_pred             -ccccCCC------------------cceeEEEecCccceEEe-CCCCHHHcccchhhHHHHHHHH-HhcCCCCCCEEEE
Confidence             4654444                  9999999999 999999 9999999999999999999988 4589999999999


Q ss_pred             EcC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhC-CCCccEEEEcCCCh
Q 019822          157 LGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH-GMGVDYCFECTGVP  233 (335)
Q Consensus       157 ~G~-g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~-g~g~d~vid~~g~~  233 (335)
                      +|+ |++|++++|+++.. |+ +|+++++++++++.++++|+++++++.+   .++.+.+++++. + ++|++||++|++
T Consensus       177 ~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~-~~d~vi~~~g~~  251 (347)
T 1jvb_A          177 VGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASM---QDPLAEIRRITESK-GVDAVIDLNNSE  251 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHTTTS-CEEEEEESCCCH
T ss_pred             ECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCC---ccHHHHHHHHhcCC-CceEEEECCCCH
Confidence            998 59999999999999 99 9999999999999999999999998877   677778888776 5 899999999988


Q ss_pred             HHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeec
Q 019822          234 SLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKL  313 (335)
Q Consensus       234 ~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l  313 (335)
                      ..++.++++++++ |+++.+|...... +++...++.+++++.++...+   .++++++++++++++++  ++++++|||
T Consensus       252 ~~~~~~~~~l~~~-G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l  324 (347)
T 1jvb_A          252 KTLSVYPKALAKQ-GKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGN---QSDFLGIMRLAEAGKVK--PMITKTMKL  324 (347)
T ss_dssp             HHHTTGGGGEEEE-EEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCC---HHHHHHHHHHHHTTSSC--CCCEEEEEG
T ss_pred             HHHHHHHHHHhcC-CEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccC---HHHHHHHHHHHHcCCCC--ceEEEEEcH
Confidence            7889999999997 9999999865223 677777778999999876432   46789999999999975  457899999


Q ss_pred             hhHHHHHHHhcCCCe-eeEEEeC
Q 019822          314 EEIDKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       314 ~~~~ea~~~~~~~~~-~k~vi~~  335 (335)
                      +++++||+.+.+++. .|+|+++
T Consensus       325 ~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          325 EEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHCCCCcceEEecC
Confidence            999999999988875 4999875

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-46  Score=344.34  Aligned_cols=296  Identities=22%  Similarity=0.282  Sum_probs=255.8

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|++|++||+|++.+. ..|+.|++|+.|++++|.+...  .|...
T Consensus        46 D~~~~~g~~~~~~~~p~v~G-~E~-~G~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~~  121 (347)
T 2hcy_A           46 DLHAWHGDWPLPVKLPLVGG-HEG-AGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYTH  121 (347)
T ss_dssp             HHHHHHTCSSSCCCSSEECC-CEE-EEEEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEE--BTTTB
T ss_pred             HHHHhcCCCCCCCCCCcccC-ccc-eEEEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccc--cccCC
Confidence            55566676663 46899999 999 9999999999999999999998764 3699999999999999998755  35545


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTV  162 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~v  162 (335)
                      +|                  +|+||+.+|++.++++|+++++++||++++++.|||+++. +.+++++++|||+|+ |++
T Consensus       122 ~G------------------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Ga~ggi  182 (347)
T 2hcy_A          122 DG------------------SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALK-SANLMAGHWVAISGAAGGL  182 (347)
T ss_dssp             CC------------------SSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHH-TTTCCTTCEEEEETTTSHH
T ss_pred             CC------------------cceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHH-hcCCCCCCEEEEECCCchH
Confidence            55                  9999999999999999999999999999999999999884 458999999999998 999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |++++++++..|+ +|+++++++++.+.++++|++.++|+.+  ..++.+.+++.+++ ++|++||++|....++.+++.
T Consensus       183 G~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~-~~D~vi~~~g~~~~~~~~~~~  258 (347)
T 2hcy_A          183 GSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTK--EKDIVGAVLKATDG-GAHGVINVSVSEAAIEASTRY  258 (347)
T ss_dssp             HHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTT--CSCHHHHHHHHHTS-CEEEEEECSSCHHHHHHHTTS
T ss_pred             HHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCc--cHhHHHHHHHHhCC-CCCEEEECCCcHHHHHHHHHH
Confidence            9999999999999 9999999999999999999998888762  15688888888877 999999999986688999999


Q ss_pred             hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      ++++ |+++.+|...+...+++...++.+++++.|+...+   ..++++++++++++++++.   +++|||+++++||+.
T Consensus       259 l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~  331 (347)
T 2hcy_A          259 VRAN-GTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN---RADTREALDFFARGLVKSP---IKVVGLSTLPEIYEK  331 (347)
T ss_dssp             EEEE-EEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHH
T ss_pred             HhcC-CEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCC---HHHHHHHHHHHHhCCCccc---eEEEcHHHHHHHHHH
Confidence            9997 99999998764445677777888999999876432   4678999999999998764   478999999999999


Q ss_pred             hcCCCe-eeEEEeC
Q 019822          323 LKQPDC-VKVLITI  335 (335)
Q Consensus       323 ~~~~~~-~k~vi~~  335 (335)
                      +.+++. .|+|+++
T Consensus       332 ~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          332 MEKGQIVGRYVVDT  345 (347)
T ss_dssp             HHTTCCSSEEEEES
T ss_pred             HHcCCcceeEEEec
Confidence            988764 5999864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8e-47  Score=353.92  Aligned_cols=305  Identities=21%  Similarity=0.259  Sum_probs=250.7

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc----cccc
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA----LNGL   81 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~----~~g~   81 (335)
                      |++.++|.++ ..+|.++| ||+ +|+|+++|++|++|++||+|++.+...|+.|++|++|.+++|.+....    .+|+
T Consensus        49 D~~~~~g~~~-~~~p~v~G-hE~-~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~  125 (398)
T 1kol_A           49 DQHMVRGRTT-AQVGLVLG-HEI-TGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGY  125 (398)
T ss_dssp             HHHHHTTCSC-CCTTCBCC-CCE-EEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTC
T ss_pred             hHHHHcCCCC-CCCCcccC-ccc-EEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeee
Confidence            5555666654 34789999 999 999999999999999999999988899999999999999999875421    0122


Q ss_pred             ccCCCccccccCceeecccccccceeeEEeccc--ceEEcCCCCCccc----ccccccchhhhhHHHHHhcCCCCCCEEE
Q 019822           82 MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN--YVVKVDPSIDPSD----ASFLSCGFTTGYGAAWKEAKVEKGSSVA  155 (335)
Q Consensus        82 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~lp~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~~~~Vl  155 (335)
                      ...+              ...|+|+||+++|++  .++++|+++++++    +|++++++.|||+++. +++++++++||
T Consensus       126 ~~~~--------------~~~G~~aey~~v~~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~Vl  190 (398)
T 1kol_A          126 VDMG--------------DWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVY  190 (398)
T ss_dssp             TTSC--------------CBCCCSBSEEEESSHHHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEE
T ss_pred             ccCC--------------CCCceeeeEEEecchhCeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEE
Confidence            1000              012489999999987  8999999999887    6888889999999984 78999999999


Q ss_pred             EEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh--
Q 019822          156 VLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP--  233 (335)
Q Consensus       156 I~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~--  233 (335)
                      |+|+|++|++++|+||.+|+++|++++++++++++++++|++ ++++++  ..++.+.++++++++++|+|||++|++  
T Consensus       191 V~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~--~~~~~~~v~~~t~g~g~Dvvid~~G~~~~  267 (398)
T 1kol_A          191 VAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-IADLSL--DTPLHEQIAALLGEPEVDCAVDAVGFEAR  267 (398)
T ss_dssp             EECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EEETTS--SSCHHHHHHHHHSSSCEEEEEECCCTTCB
T ss_pred             EECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EEccCC--cchHHHHHHHHhCCCCCCEEEECCCCccc
Confidence            999999999999999999997899999999999999999997 777765  123788899999888999999999975  


Q ss_pred             -------------HHHHHHHHhhccCCeEEEEEccCC-Cc-----------cccchhHHHhhcCcEEEEeeccCCCCcCc
Q 019822          234 -------------SLLSEALETTKVGKGKVIVIGVGV-DA-----------MVPLNVIALACGGRTLKGTTFGGIKTKSD  288 (335)
Q Consensus       234 -------------~~~~~~~~~l~~~~G~~v~~g~~~-~~-----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  288 (335)
                                   ..++.++++++++ |+++.+|... +.           ..+++...++.+++++.++..   ...++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~  343 (398)
T 1kol_A          268 GHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQT---PVMKY  343 (398)
T ss_dssp             CSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSC---CHHHH
T ss_pred             ccccccccccchHHHHHHHHHHHhcC-CEEEEeccccCCcccccccccccccccccHHHHhhcccEEEeccc---ChHHH
Confidence                         2688999999998 9999998752 11           235566667778999987532   12356


Q ss_pred             HHHHHHHHhCCCCC-CCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          289 LPTLLDKCKNKEFK-LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       289 ~~~~~~~i~~~~~~-~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      +.++++++.+|+++ +.++++++|+|+++++||+.+.+++..|+|+++
T Consensus       344 ~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~  391 (398)
T 1kol_A          344 NRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVIDP  391 (398)
T ss_dssp             HHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCSCEEEECT
T ss_pred             HHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCceEEEEEe
Confidence            78899999999987 345678999999999999999877668999864

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=3.4e-46  Score=345.46  Aligned_cols=292  Identities=24%  Similarity=0.285  Sum_probs=253.3

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc--ccccc
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA--LNGLM   82 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~--~~g~~   82 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|++|++||+|++.+..      +|..|. +.|.+....  .+|..
T Consensus        69 D~~~~~g~~~~~~~~P~v~G-hE~-~G~V~~vG~~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~  139 (363)
T 3uog_A           69 DKLVLETGMGLDLAFPFVPA-SDM-SGVVEAVGKSVTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGA  139 (363)
T ss_dssp             HHHHHHHCTTCCCCSSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTT
T ss_pred             HHHHhcCCCCCCCCCCcCcc-cce-EEEEEEECCCCCCCCCCCEEEEeccc------cccccc-cccccccccccccCcC
Confidence            55666777764 57899999 999 99999999999999999999987643      577788 888742211  02444


Q ss_pred             cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                      .+|                  +|+||+.+|++.++++|+++++++||++++++.|||+++.+.++++++++|||+|+|++
T Consensus       140 ~~G------------------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~v  201 (363)
T 3uog_A          140 HPG------------------VLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGV  201 (363)
T ss_dssp             SCC------------------CCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHH
T ss_pred             CCC------------------cceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHH
Confidence            444                  99999999999999999999999999999999999999988899999999999999999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |++++|+|+.+|+ +|++++++++++++++++|+++++++..   .++.+.++++++++++|+||||+|.. .+..++++
T Consensus       202 G~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~~~~~v~~~~~g~g~D~vid~~g~~-~~~~~~~~  276 (363)
T 3uog_A          202 ALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLE---EDWVERVYALTGDRGADHILEIAGGA-GLGQSLKA  276 (363)
T ss_dssp             HHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHHTTCCEEEEEEETTSS-CHHHHHHH
T ss_pred             HHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEcCCc---ccHHHHHHHHhCCCCceEEEECCChH-HHHHHHHH
Confidence            9999999999999 9999999999999999999999999655   67899999999988999999999965 78999999


Q ss_pred             hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      ++++ |+++.+|.......+++...++.+++++.++..++   .+++++++++++++++  +++++++|+|+++++||+.
T Consensus       277 l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l--~~~i~~~~~l~~~~~A~~~  350 (363)
T 3uog_A          277 VAPD-GRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGH---RRALEDLVGAVDRLGL--KPVIDMRYKFTEVPEALAH  350 (363)
T ss_dssp             EEEE-EEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCC---HHHHHHHHHHHHHHTC--CCCEEEEEEGGGHHHHHHT
T ss_pred             hhcC-CEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCC---HHHHHHHHHHHHcCCC--ccceeeEEcHHHHHHHHHH
Confidence            9998 99999998765446677777888999999987543   5679999999999985  4568899999999999999


Q ss_pred             hcCCCeeeEEEeC
Q 019822          323 LKQPDCVKVLITI  335 (335)
Q Consensus       323 ~~~~~~~k~vi~~  335 (335)
                      +.+++..|+||++
T Consensus       351 ~~~~~~gKvvi~~  363 (363)
T 3uog_A          351 LDRGPFGKVVIEF  363 (363)
T ss_dssp             GGGCCSBEEEEEC
T ss_pred             HHcCCCccEEEeC
Confidence            9888855999975

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.5e-46  Score=348.32  Aligned_cols=292  Identities=21%  Similarity=0.344  Sum_probs=243.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCcccccc-----
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALN-----   79 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~-----   79 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|++.+. ..|+.|++|++|.++.|.+......     
T Consensus        63 D~~~~~g~~~~~~~P~v~G-hE~-~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~  140 (369)
T 1uuf_A           63 DLHQVRSEWAGTVYPCVPG-HEI-VGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPD  140 (369)
T ss_dssp             HHHHHHCTTSCCCSSBCCC-CCE-EEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSS
T ss_pred             HHHHhcCCCCCCCCCeecc-cCc-eEEEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhccccccccc
Confidence            4555667666556899999 999 9999999999999999999998775 4799999999999999987521100     


Q ss_pred             -ccccCCCccccccCceeecccccccceeeEEecccceEEcCCC-CCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           80 -GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPS-IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        80 -g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                       |...+                  |+|+||+.+|++.++++|++ +++++||++++++.|||+++.+ ++++++++|||+
T Consensus       141 ~g~~~~------------------G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~  201 (369)
T 1uuf_A          141 EPGHTL------------------GGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVV  201 (369)
T ss_dssp             TTSBCC------------------CSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEE
T ss_pred             CCCCCC------------------CcccceEEEcchhEEECCCCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEE
Confidence             21222                  49999999999999999999 9999999999999999999854 689999999999


Q ss_pred             cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHH
Q 019822          158 GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS  237 (335)
Q Consensus       158 G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~  237 (335)
                      |+|++|++++|+|+.+|+ +|++++++++++++++++|+++++++++   .++.   +++.  .++|+|||++|.+..++
T Consensus       202 GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~---~~~~--~g~Dvvid~~g~~~~~~  272 (369)
T 1uuf_A          202 GIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRN---ADEM---AAHL--KSFDFILNTVAAPHNLD  272 (369)
T ss_dssp             CCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTC---HHHH---HTTT--TCEEEEEECCSSCCCHH
T ss_pred             CCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEecccc---HHHH---HHhh--cCCCEEEECCCCHHHHH
Confidence            999999999999999999 8999999999999999999999999886   5543   3333  38999999999876789


Q ss_pred             HHHHhhccCCeEEEEEccCCCccc-cchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhH
Q 019822          238 EALETTKVGKGKVIVIGVGVDAMV-PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI  316 (335)
Q Consensus       238 ~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~  316 (335)
                      .++++++++ |+++.+|.... .. +++...++.+++++.|+..++   .+++.+++++++++++++.  + ++|||+++
T Consensus       273 ~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~  344 (369)
T 1uuf_A          273 DFTTLLKRD-GTMTLVGAPAT-PHKSPEVFNLIMKRRAIAGSMIGG---IPETQEMLDFCAEHGIVAD--I-EMIRADQI  344 (369)
T ss_dssp             HHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC---HHHHHHHHHHHHHHTCCCC--E-EEECGGGH
T ss_pred             HHHHHhccC-CEEEEeccCCC-CccccCHHHHHhCCcEEEEeecCC---HHHHHHHHHHHHhCCCCcc--e-EEEcHHHH
Confidence            999999997 99999998653 23 566667778999999876433   4678999999999997754  4 57999999


Q ss_pred             HHHHHHhcCCCe-eeEEEeC
Q 019822          317 DKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       317 ~ea~~~~~~~~~-~k~vi~~  335 (335)
                      ++||+.+.+++. .|+|+++
T Consensus       345 ~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          345 NEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             HHHHHHHHTTCSSSEEEEEG
T ss_pred             HHHHHHHHcCCCceEEEEec
Confidence            999999988775 5999864

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=6.6e-47  Score=349.90  Aligned_cols=291  Identities=19%  Similarity=0.307  Sum_probs=245.6

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCC-cccCCCEEEec-ccCCCCCCcccccCCCCCCcCc-ccc-c---
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVK-EVKEGDIVIPT-YIGECKECENCTSEMTNLCLKY-PIA-L---   78 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~-~~~~Gd~V~~~-~~~~~~~~~~c~~g~~~~c~~~-~~~-~---   78 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++|+ +|++||+|++. +...|+.|++|++|.++.|.+. ... .   
T Consensus        49 D~~~~~g~~~~~~~p~v~G-hE~-~G~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~  126 (360)
T 1piw_A           49 DIHCAAGHWGNMKMPLVVG-HEI-VGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYE  126 (360)
T ss_dssp             HHHHHTTTTSCCCSSEECC-CCE-EEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCT
T ss_pred             hHHHhcCCCCCCCCCcccC-cCc-eEEEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccC
Confidence            5556667766556899999 999 999999999999 99999999654 4578999999999999999865 111 0   


Q ss_pred             cccccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc
Q 019822           79 NGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG  158 (335)
Q Consensus        79 ~g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G  158 (335)
                      .|...+                  |+|+||+.+|++.++++|+++++++||++++++.|||+++.+ ++++++++|||+|
T Consensus       127 ~g~~~~------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~G  187 (360)
T 1piw_A          127 DGYVSQ------------------GGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVG  187 (360)
T ss_dssp             TSCBCC------------------CSSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEEC
T ss_pred             CCccCC------------------CcceeEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEEC
Confidence            022223                  499999999999999999999999999999999999999855 8999999999999


Q ss_pred             CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCch-hHHHHHHhhhCCCCccEEEEcCCC--hHH
Q 019822          159 LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGV--PSL  235 (335)
Q Consensus       159 ~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~-~~~~~i~~~~~g~g~d~vid~~g~--~~~  235 (335)
                      +|++|++++|+|+.+|+ +|++++++++++++++++|+++++++++   . ++.+.++    + ++|+|||++|.  +..
T Consensus       188 aG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~---~~~~~~~~~----~-~~D~vid~~g~~~~~~  258 (360)
T 1piw_A          188 LGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLE---EGDWGEKYF----D-TFDLIVVCASSLTDID  258 (360)
T ss_dssp             CSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGG---TSCHHHHSC----S-CEEEEEECCSCSTTCC
T ss_pred             CCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcC---chHHHHHhh----c-CCCEEEECCCCCcHHH
Confidence            99999999999999999 8999999999999999999999998876   4 5554443    3 89999999998  557


Q ss_pred             HHHHHHhhccCCeEEEEEccCCCccc-cchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeech
Q 019822          236 LSEALETTKVGKGKVIVIGVGVDAMV-PLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLE  314 (335)
Q Consensus       236 ~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~  314 (335)
                      ++.++++++++ |+++.+|....  . .++...++.+++++.++...+   .+++++++++++++++++.  + ++|||+
T Consensus       259 ~~~~~~~l~~~-G~iv~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--i-~~~~l~  329 (360)
T 1piw_A          259 FNIMPKAMKVG-GRIVSISIPEQ--HEMLSLKPYGLKAVSISYSALGS---IKELNQLLKLVSEKDIKIW--V-ETLPVG  329 (360)
T ss_dssp             TTTGGGGEEEE-EEEEECCCCCS--SCCEEECGGGCBSCEEEECCCCC---HHHHHHHHHHHHHTTCCCC--E-EEEESS
T ss_pred             HHHHHHHhcCC-CEEEEecCCCC--ccccCHHHHHhCCeEEEEEecCC---HHHHHHHHHHHHhCCCcce--E-EEEecc
Confidence            78999999997 99999998653  3 455566777999999876432   4678999999999997654  5 899999


Q ss_pred             h--HHHHHHHhcCCCe-eeEEEeC
Q 019822          315 E--IDKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       315 ~--~~ea~~~~~~~~~-~k~vi~~  335 (335)
                      +  +++||+.+.+++. .|+|+++
T Consensus       330 ~~~~~~A~~~~~~~~~~gKvvi~~  353 (360)
T 1piw_A          330 EAGVHEAFERMEKGDVRYRFTLVG  353 (360)
T ss_dssp             HHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HhHHHHHHHHHHCCCCceEEEEec
Confidence            9  9999999987775 4999874

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=2.7e-47  Score=352.11  Aligned_cols=291  Identities=19%  Similarity=0.198  Sum_probs=247.2

Q ss_pred             EEeEeecCCCCCCc---cccccccccceEEEEEeCCCCCcccCCCEEEecccCC--CCCCcccccCCCCCCcCccccccc
Q 019822            6 TLISFALKDSQRLF---ILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGE--CKECENCTSEMTNLCLKYPIALNG   80 (335)
Q Consensus         6 d~~~~~g~~~~~~~---p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~--~~~~~~c~~g~~~~c~~~~~~~~g   80 (335)
                      |++.+.|.++...+   |.++| ||+ +| |+++|++ ++|++||||++.+...  |+.|++|+.|.+++|.+......|
T Consensus        41 D~~~~~g~~~~~~~~~~p~v~G-~E~-~G-V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g  116 (357)
T 2b5w_A           41 DHEVIAGGHGGFPEGEDHLVLG-HEA-VG-VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERG  116 (357)
T ss_dssp             HHHHHHSCSTTSCTTCSEEECC-SEE-EE-EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEET
T ss_pred             cHHHHcCCCCCCCCCCCCcccC-cee-EE-EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccC
Confidence            55566776665556   99999 999 99 9999999 9999999999988878  999999999999999976542103


Q ss_pred             c-ccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCC------CE
Q 019822           81 L-MLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG------SS  153 (335)
Q Consensus        81 ~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~------~~  153 (335)
                      . ..+|                  +|+||+.+|++.++++|++++ +. |+++.+++|||+++ ++++++++      ++
T Consensus       117 ~~~~~G------------------~~aey~~v~~~~~~~iP~~~~-~~-aal~~~~~ta~~al-~~~~~~~g~~~~~~~~  175 (357)
T 2b5w_A          117 IVGAHG------------------YMSEFFTSPEKYLVRIPRSQA-EL-GFLIEPISITEKAL-EHAYASRSAFDWDPSS  175 (357)
T ss_dssp             TBEECC------------------SCBSEEEEEGGGEEECCGGGS-TT-GGGHHHHHHHHHHH-HHHHHTTTTSCCCCCE
T ss_pred             ccCCCc------------------ceeeEEEEchHHeEECCCCcc-hh-hhhhchHHHHHHHH-HhcCCCCCcccCCCCE
Confidence            3 2333                  999999999999999999999 55 45777999999998 77889999      99


Q ss_pred             EEEEcCCHHHHHH-HHHH-HHcCCCEEEEEcCChh---hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          154 VAVLGLGTVGLGA-VDGA-RMHGAAKIIGIDKNPW---KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       154 VlI~G~g~vG~~a-i~la-~~~G~~~V~~~~~~~~---~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      |||+|+|++|+++ +|+| +.+|+++|++++++++   ++++++++|++++ ++++   .++.+ ++++ ++ ++|+|||
T Consensus       176 VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~---~~~~~-i~~~-~g-g~Dvvid  248 (357)
T 2b5w_A          176 AFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQ---TPVED-VPDV-YE-QMDFIYE  248 (357)
T ss_dssp             EEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTT---SCGGG-HHHH-SC-CEEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCc---cCHHH-HHHh-CC-CCCEEEE
Confidence            9999999999999 9999 9999955999999999   9999999999999 8876   66777 7777 67 9999999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHH----hhcCcEEEEeeccCCCCcCcHHHHHHHHhCC--CCC
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIAL----ACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK--EFK  302 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~--~~~  302 (335)
                      ++|++..++.++++++++ |+++.+|.......+++...+    +.+++++.|+..++   .+++++++++++++  ++ 
T Consensus       249 ~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~~~~-  323 (357)
T 2b5w_A          249 ATGFPKHAIQSVQALAPN-GVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWF-  323 (357)
T ss_dssp             CSCCHHHHHHHHHHEEEE-EEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHSCHHH-
T ss_pred             CCCChHHHHHHHHHHhcC-CEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCC---HHHHHHHHHHHHhCchhh-
Confidence            999977889999999997 999999987533456666666    77999999876433   56789999999999  86 


Q ss_pred             CCCceeEEeechhHHHHHHHhcCCCeeeEEEeC
Q 019822          303 LHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       303 ~~~~~~~~~~l~~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      +.++++++|||+++++||+.+  +...|+|+++
T Consensus       324 ~~~~i~~~~~l~~~~~A~~~~--~~~gKvvi~~  354 (357)
T 2b5w_A          324 LEDLVTGVHPLSEFEAAFDDD--DTTIKTAIEF  354 (357)
T ss_dssp             HHHHEEEEEEGGGGGGGGCCS--TTCCEEEEEC
T ss_pred             hhhhcceeecHHHHHHHHHHh--CCCceEEEEe
Confidence            666788999999999999988  4456999874

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.9e-45  Score=339.71  Aligned_cols=296  Identities=23%  Similarity=0.373  Sum_probs=244.1

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|++.+ ..+|+.|++|+.|.++.|.+......+....
T Consensus        50 D~~~~~g~~~~~~~P~v~G-hE~-~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~  127 (357)
T 2cf5_A           50 DLHQTKNDLGMSNYPMVPG-HEV-VGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYIN  127 (357)
T ss_dssp             HHHHHTCTTTCCCSSBCCC-CEE-EEEEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTT
T ss_pred             hhhhhcCCCCCCCCCeecC-cce-eEEEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccC
Confidence            4555667666556899999 999 999999999999999999998755 3589999999999999996543210110000


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCC-CCCEEEEEcCCHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE-KGSSVAVLGLGTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-~~~~VlI~G~g~vG  163 (335)
                      |             ....|+|+||+.+|++.++++|+++++++||++++++.|||+++. +.++. ++++|||+|+|++|
T Consensus       128 g-------------~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~GaG~vG  193 (357)
T 2cf5_A          128 G-------------QPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGLGGVG  193 (357)
T ss_dssp             S-------------CBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECCSHHH
T ss_pred             C-------------CCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECCCHHH
Confidence            0             011259999999999999999999999999999999999999874 57888 99999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      ++++|+|+.+|+ +|+++++++++++.++ ++|+++++++++   .   +.+++.++  ++|+|||++|.+..++.++++
T Consensus       194 ~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~---~---~~~~~~~~--g~D~vid~~g~~~~~~~~~~~  264 (357)
T 2cf5_A          194 HMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSD---Q---AKMSELAD--SLDYVIDTVPVHHALEPYLSL  264 (357)
T ss_dssp             HHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTC---H---HHHHHSTT--TEEEEEECCCSCCCSHHHHTT
T ss_pred             HHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeecccc---H---HHHHHhcC--CCCEEEECCCChHHHHHHHHH
Confidence            999999999999 9999999999999987 999999998875   3   24555553  799999999986567999999


Q ss_pred             hccCCeEEEEEccCCCcccc-chhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVDAMVP-LNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      ++++ |+++.+|.... ... ++.. ++.+++++.|+...+   .+++++++++++++++++.  + ++|||+++++||+
T Consensus       265 l~~~-G~iv~~G~~~~-~~~~~~~~-~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~  335 (357)
T 2cf5_A          265 LKLD-GKLILMGVINN-PLQFLTPL-LMLGRKVITGSFIGS---MKETEEMLEFCKEKGLSSI--I-EVVKMDYVNTAFE  335 (357)
T ss_dssp             EEEE-EEEEECSCCSS-CCCCCHHH-HHHHTCEEEECCSCC---HHHHHHHHHHHHHTTCCCC--E-EEEEGGGHHHHHH
T ss_pred             hccC-CEEEEeCCCCC-CccccCHH-HHhCccEEEEEccCC---HHHHHHHHHHHHcCCCCCc--e-EEEeHHHHHHHHH
Confidence            9997 99999998654 233 5555 777999999876432   4678999999999998764  4 6999999999999


Q ss_pred             HhcCCCe-eeEEEeC
Q 019822          322 LLKQPDC-VKVLITI  335 (335)
Q Consensus       322 ~~~~~~~-~k~vi~~  335 (335)
                      .+.+++. .|+|+++
T Consensus       336 ~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          336 RLEKNDVRYRFVVDV  350 (357)
T ss_dssp             HHHTTCSSSEEEEET
T ss_pred             HHHCCCCceEEEEeC
Confidence            9988775 4999864

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=9.7e-45  Score=335.97  Aligned_cols=296  Identities=22%  Similarity=0.387  Sum_probs=245.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|++.+. ..|+.|++|++|.++.|.+......+....
T Consensus        57 D~~~~~g~~~~~~~P~v~G-hE~-~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~  134 (366)
T 1yqd_A           57 DLHSIKNDWGFSMYPLVPG-HEI-VGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHD  134 (366)
T ss_dssp             HHHHHHTSSSCCCSSBCCC-CCE-EEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTT
T ss_pred             hHHHHcCCCCCCCCCEecc-cce-EEEEEEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccC
Confidence            5555667666556899999 999 9999999999999999999987553 689999999999999996543311111000


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCC-CCCEEEEEcCCHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE-KGSSVAVLGLGTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-~~~~VlI~G~g~vG  163 (335)
                      |             ....|+|+||+.+|++.++++|+++++++||++++++.|||+++. +.++. ++++|||+|+|++|
T Consensus       135 g-------------~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~al~-~~~~~~~g~~VlV~GaG~vG  200 (366)
T 1yqd_A          135 G-------------TITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLK-YFGLDEPGKHIGIVGLGGLG  200 (366)
T ss_dssp             S-------------CBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHHHHHHHHH-HTTCCCTTCEEEEECCSHHH
T ss_pred             C-------------CcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHHHHHHHHH-hcCcCCCCCEEEEECCCHHH
Confidence            0             011249999999999999999999999999999999999999874 56788 99999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      ++++|+|+.+|+ +|+++++++++++.++ ++|+++++++++   .+   .+++.++  ++|+|||++|....++.++++
T Consensus       201 ~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~---~~---~~~~~~~--~~D~vid~~g~~~~~~~~~~~  271 (366)
T 1yqd_A          201 HVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLVSRD---QE---QMQAAAG--TLDGIIDTVSAVHPLLPLFGL  271 (366)
T ss_dssp             HHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEETTC---HH---HHHHTTT--CEEEEEECCSSCCCSHHHHHH
T ss_pred             HHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEeccC---HH---HHHHhhC--CCCEEEECCCcHHHHHHHHHH
Confidence            999999999999 9999999999999876 999999998876   33   4555553  799999999986567899999


Q ss_pred             hccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      ++++ |+++.+|.... ..+++...++.+++++.++..+.   .+++.+++++++++++++.  + ++|||+++++||+.
T Consensus       272 l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~  343 (366)
T 1yqd_A          272 LKSH-GKLILVGAPEK-PLELPAFSLIAGRKIVAGSGIGG---MKETQEMIDFAAKHNITAD--I-EVISTDYLNTAMER  343 (366)
T ss_dssp             EEEE-EEEEECCCCSS-CEEECHHHHHTTTCEEEECCSCC---HHHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHH
T ss_pred             HhcC-CEEEEEccCCC-CCCcCHHHHHhCCcEEEEecCCC---HHHHHHHHHHHHcCCCCCc--e-EEEcHHHHHHHHHH
Confidence            9997 99999998653 44567777888999999876432   4578899999999998764  4 69999999999999


Q ss_pred             hcCCCe-eeEEEe
Q 019822          323 LKQPDC-VKVLIT  334 (335)
Q Consensus       323 ~~~~~~-~k~vi~  334 (335)
                      +.+++. .|+|+.
T Consensus       344 ~~~~~~~gKvvl~  356 (366)
T 1yqd_A          344 LAKNDVRYRFVID  356 (366)
T ss_dssp             HHTTCCSSEEEEC
T ss_pred             HHcCCcceEEEEE
Confidence            988775 499885

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=1.5e-43  Score=337.05  Aligned_cols=288  Identities=19%  Similarity=0.188  Sum_probs=247.8

Q ss_pred             Ccc-ccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822           18 LFI-LVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL   96 (335)
Q Consensus        18 ~~p-~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~   96 (335)
                      .+| .++| ||+ +|+|+++|++|++|++||+|++... .|..|..|..+.++.|.+...  +|+..+            
T Consensus       115 ~~P~~v~G-hE~-~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~--~G~~~~------------  177 (456)
T 3krt_A          115 DLPYHVIG-SDL-AGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRI--WGFETN------------  177 (456)
T ss_dssp             CCSEEECC-SCC-EEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEE--TTTTSS------------
T ss_pred             CCCccccc-cee-EEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccc--cccCCC------------
Confidence            466 6999 999 9999999999999999999998643 588888899999999988766  465433            


Q ss_pred             ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHh--cCCCCCCEEEEEcC-CHHHHHHHHHHHHc
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE--AKVEKGSSVAVLGL-GTVGLGAVDGARMH  173 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~~~~VlI~G~-g~vG~~ai~la~~~  173 (335)
                           .|+|+||+++|++.++++|+++++++||++++++.|||+++...  ++++++++|||+|+ |++|++++|+|+.+
T Consensus       178 -----~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~  252 (456)
T 3krt_A          178 -----FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAG  252 (456)
T ss_dssp             -----SCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT
T ss_pred             -----CCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence                 13999999999999999999999999999998999999988654  78999999999998 99999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCc--------------hhHHHHHHhhhCCCCccEEEEcCCChHHHHHH
Q 019822          174 GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN--------------KSISELVKGITHGMGVDYCFECTGVPSLLSEA  239 (335)
Q Consensus       174 G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~--------------~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~  239 (335)
                      |+ +|++++++++++++++++|+++++++.+.+.              ..+.+.++++++++++|+||||+|+. .+..+
T Consensus       253 Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~-~~~~~  330 (456)
T 3krt_A          253 GA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE-TFGAS  330 (456)
T ss_dssp             TC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHH-HHHHH
T ss_pred             CC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCch-hHHHH
Confidence            99 9999989999999999999999998876110              12457888889888999999999985 88999


Q ss_pred             HHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHH
Q 019822          240 LETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKA  319 (335)
Q Consensus       240 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea  319 (335)
                      +++++++ |+++.+|...+...+++...+..+++++.|+..++   ..++.++++++++|+++  ++++++|||+++++|
T Consensus       331 ~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~eA  404 (456)
T 3krt_A          331 VFVTRKG-GTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFAN---YREAWEANRLIAKGRIH--PTLSKVYSLEDTGQA  404 (456)
T ss_dssp             HHHEEEE-EEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSC--CCEEEEEEGGGHHHH
T ss_pred             HHHhhCC-cEEEEEecCCCcccccCHHHHHhcCeEEEEeccCC---HHHHHHHHHHHHcCCcc--cceeEEEcHHHHHHH
Confidence            9999998 99999998765455677777788999999987544   35677899999999976  458899999999999


Q ss_pred             HHHhcCCCee-eEEEeC
Q 019822          320 IQLLKQPDCV-KVLITI  335 (335)
Q Consensus       320 ~~~~~~~~~~-k~vi~~  335 (335)
                      |+.+.+++.. |++|.+
T Consensus       405 ~~~l~~~~~~GKvvv~~  421 (456)
T 3krt_A          405 AYDVHRNLHQGKVGVLC  421 (456)
T ss_dssp             HHHHHTTCSSSEEEEES
T ss_pred             HHHHHhCCCCCcEEEEe
Confidence            9999887764 988753

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=3.3e-43  Score=334.18  Aligned_cols=284  Identities=19%  Similarity=0.174  Sum_probs=244.1

Q ss_pred             Ccc-ccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822           18 LFI-LVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL   96 (335)
Q Consensus        18 ~~p-~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~   96 (335)
                      .+| .++| ||+ +|+|+++|++|++|++||+|++.+...|+.|+ |..+.++.|.+...  +|+..+            
T Consensus       107 ~~P~~v~G-hE~-~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~--~G~~~~------------  169 (447)
T 4a0s_A          107 DQPYHVLG-SDC-SGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP-ATHGDGMLGTEQRA--WGFETN------------  169 (447)
T ss_dssp             CCSEEECC-SCE-EEEEEEECTTCCSCCTTCEEEECSEECCTTSG-GGGTCTTCSTTCEE--TTTTSS------------
T ss_pred             CCCCcccc-cce-eEEEEEECCCCCCCCCCCEEEEecCcCcCccc-cccccccccccccc--ccccCC------------
Confidence            466 7999 999 99999999999999999999999888787776 55678999988766  465543            


Q ss_pred             ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHH--hcCCCCCCEEEEEcC-CHHHHHHHHHHHHc
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK--EAKVEKGSSVAVLGL-GTVGLGAVDGARMH  173 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~~~~VlI~G~-g~vG~~ai~la~~~  173 (335)
                           .|+|+||+.+|++.++++|+++++++||++++++.|||+++..  .++++++++|||+|+ |++|++++|+|+..
T Consensus       170 -----~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~  244 (447)
T 4a0s_A          170 -----FGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNG  244 (447)
T ss_dssp             -----SCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHT
T ss_pred             -----CCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence                 1399999999999999999999999999999899999999864  388999999999997 99999999999999


Q ss_pred             CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchh------------------HHHHHHhhhCCCCccEEEEcCCChHH
Q 019822          174 GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS------------------ISELVKGITHGMGVDYCFECTGVPSL  235 (335)
Q Consensus       174 G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~------------------~~~~i~~~~~g~g~d~vid~~g~~~~  235 (335)
                      |+ +|++++++++++++++++|+++++++.+   .+                  +.+.+++.+ +.++|++||++|.. .
T Consensus       245 Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~~-~  318 (447)
T 4a0s_A          245 GG-IPVAVVSSAQKEAAVRALGCDLVINRAE---LGITDDIADDPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGRV-T  318 (447)
T ss_dssp             TC-EEEEEESSHHHHHHHHHTTCCCEEEHHH---HTCCTTGGGCHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCHH-H
T ss_pred             CC-EEEEEeCCHHHHHHHHhcCCCEEEeccc---ccccccccccccccchhhhHHHHHHHHHh-CCCceEEEECCCch-H
Confidence            99 9999999999999999999999887654   22                  367788888 66999999999986 7


Q ss_pred             HHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechh
Q 019822          236 LSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE  315 (335)
Q Consensus       236 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~  315 (335)
                      ++.++++++++ |+++.+|...+...+++...++.+++++.|+...+   ..++.++++++++|+++  ++++++|||++
T Consensus       319 ~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~  392 (447)
T 4a0s_A          319 FGLSVIVARRG-GTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFESGAVV--PAMSAVYPLAE  392 (447)
T ss_dssp             HHHHHHHSCTT-CEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSC--CCEEEEEEGGG
T ss_pred             HHHHHHHHhcC-CEEEEEecCCCcccccCHHHHHhCCCEEEecCCCC---HHHHHHHHHHHHcCCcc--cceeEEEcHHH
Confidence            89999999997 99999997765455677777788999999886543   35678899999999975  46889999999


Q ss_pred             HHHHHHHhcCCCee-eEEEeC
Q 019822          316 IDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       316 ~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      +++||+.+.+++.. |+++.+
T Consensus       393 ~~~A~~~~~~~~~~GKvvv~~  413 (447)
T 4a0s_A          393 AAEACRVVQTSRQVGKVAVLC  413 (447)
T ss_dssp             HHHHHHHHHTTCCSSEEEEES
T ss_pred             HHHHHHHHhcCCCceEEEEEe
Confidence            99999999887764 988763

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2e-44  Score=333.99  Aligned_cols=292  Identities=18%  Similarity=0.216  Sum_probs=239.4

Q ss_pred             EEeEeec--CCCCCCc---cccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccc
Q 019822            6 TLISFAL--KDSQRLF---ILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNG   80 (335)
Q Consensus         6 d~~~~~g--~~~~~~~---p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g   80 (335)
                      |++.+.|  .++...+   |.++| ||+ +|+|++  ++ ++|++||+|++.+...|+.|++|+.|.+++|.+......|
T Consensus        42 D~~~~~g~~~~~~~~~~~~p~v~G-~E~-~G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g  116 (366)
T 2cdc_A           42 DREIVNGKLTLSTLPKGKDFLVLG-HEA-IGVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAG  116 (366)
T ss_dssp             HHHHHTTCC-------CCSCEECC-SEE-EEEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEET
T ss_pred             cHHHHcCCCCCCCCCcCCCCCcCC-cce-EEEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCC
Confidence            4455566  5553456   99999 999 999999  77 8899999999999999999999999999999876441003


Q ss_pred             cc-cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHH--H--hcCCC--C---
Q 019822           81 LM-LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW--K--EAKVE--K---  150 (335)
Q Consensus        81 ~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~--~~~~~--~---  150 (335)
                      .. .+                  |+|+||+.++++.++++|++++ ++|+ ++.++.|||+++.  +  .++++  +   
T Consensus       117 ~~~~~------------------G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~  176 (366)
T 2cdc_A          117 IHKMD------------------GFMREWWYDDPKYLVKIPKSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDD  176 (366)
T ss_dssp             TBEEC------------------CSCBSEEEECGGGEEEECGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTT
T ss_pred             ccCCC------------------CceeEEEEechHHeEECcCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCcccccccc
Confidence            32 33                  3999999999999999999999 7765 6678999999986  4  78888  8   


Q ss_pred             ----CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          151 ----GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP---WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       151 ----~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~---~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                          +++|||+|+|++|++++|+|+.+|+ +|+++++++   ++.++++++|++++ + ++    ++.+.+++ ++ .++
T Consensus       177 ~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-~~----~~~~~~~~-~~-~~~  247 (366)
T 2cdc_A          177 GTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-N-SS----NGYDKLKD-SV-GKF  247 (366)
T ss_dssp             SSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-E-CT----TCSHHHHH-HH-CCE
T ss_pred             ccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-c-hH----HHHHHHHH-hC-CCC
Confidence                9999999999999999999999999 999999998   89999999999888 6 42    45556666 55 489


Q ss_pred             cEEEEcCCChHHH-HHHHHhhccCCeEEEEEccCCCccccchhHH---HhhcCcEEEEeeccCCCCcCcHHHHHHHHhCC
Q 019822          224 DYCFECTGVPSLL-SEALETTKVGKGKVIVIGVGVDAMVPLNVIA---LACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK  299 (335)
Q Consensus       224 d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~  299 (335)
                      |++||++|.+..+ +.+++.++++ |+++.+|.......+++...   ++.+++++.|+...   ..++++++++++++|
T Consensus       248 d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~l~~~g  323 (366)
T 2cdc_A          248 DVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNG---QKPHFQQAVVHLASW  323 (366)
T ss_dssp             EEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEECCCC---CHHHHHHHHHHHHHH
T ss_pred             CEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCCCccccChhhhHHHHhcCcEEEEecCC---CHHHHHHHHHHHHcC
Confidence            9999999987677 8999999997 99999998664335666666   77899999987543   256789999999999


Q ss_pred             CCC----CCCceeEEeechhHHHHHHH--hcCCCeeeEEEeC
Q 019822          300 EFK----LHQLLTHHVKLEEIDKAIQL--LKQPDCVKVLITI  335 (335)
Q Consensus       300 ~~~----~~~~~~~~~~l~~~~ea~~~--~~~~~~~k~vi~~  335 (335)
                      +++    +.++++++|||+++++||+.  ++.+...|+|+++
T Consensus       324 ~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~  365 (366)
T 2cdc_A          324 KTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILW  365 (366)
T ss_dssp             HHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEEC
T ss_pred             CCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEec
Confidence            977    77778899999999999998  6644456999874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.7e-42  Score=319.47  Aligned_cols=272  Identities=19%  Similarity=0.255  Sum_probs=236.2

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|++|++||+|+..                             ..+
T Consensus        71 D~~~~~g~~~~~~~~p~i~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~-----------------------------~~~  119 (353)
T 4dup_A           71 DIAQRQGSYPPPKDASPILG-LEL-SGEIVGVGPGVSGYAVGDKVCGL-----------------------------ANG  119 (353)
T ss_dssp             HHHHHTTSSCCCTTSCSSSC-CEE-EEEEEEECTTCCSCCTTCEEEEE-----------------------------CSS
T ss_pred             HHHHhCCCCCCCCCCCCccc-ccc-EEEEEEECCCCCCCCCCCEEEEe-----------------------------cCC
Confidence            55666787765 45799999 999 99999999999999999999632                             223


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc-CCHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G-~g~vG  163 (335)
                                        |+|+||+.+|++.++++|+++++++||+++++++|||+++.+.++++++++|||+| +|++|
T Consensus       120 ------------------G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG  181 (353)
T 4dup_A          120 ------------------GAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIG  181 (353)
T ss_dssp             ------------------CCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHH
T ss_pred             ------------------CceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH
Confidence                              38999999999999999999999999999999999999998889999999999996 59999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+..|+ +|+++++++++++.++++|++.++++++   .++.+.+++.+ +.++|++|||+|++ .+..+++++
T Consensus       182 ~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~---~~~~~~~~~~~-~~g~Dvvid~~g~~-~~~~~~~~l  255 (353)
T 4dup_A          182 TTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRS---EDFAAVIKAET-GQGVDIILDMIGAA-YFERNIASL  255 (353)
T ss_dssp             HHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHH-SSCEEEEEESCCGG-GHHHHHHTE
T ss_pred             HHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCc---hHHHHHHHHHh-CCCceEEEECCCHH-HHHHHHHHh
Confidence            999999999999 9999999999999999999999999987   78889999988 66999999999987 789999999


Q ss_pred             ccCCeEEEEEccCCCcccc-chhHHHhhcCcEEEEeeccCCCCc-------CcHHHHHHHHhCCCCCCCCceeEEeechh
Q 019822          244 KVGKGKVIVIGVGVDAMVP-LNVIALACGGRTLKGTTFGGIKTK-------SDLPTLLDKCKNKEFKLHQLLTHHVKLEE  315 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~i~~~~~~~~~~~~~~~~l~~  315 (335)
                      +++ |+++.+|...+.... ++...++.+++++.|+........       ..++.+++++++|+++  ++++++|+|++
T Consensus       256 ~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~  332 (353)
T 4dup_A          256 AKD-GCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVA--PVIHKVFAFED  332 (353)
T ss_dssp             EEE-EEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSC--CCEEEEEEGGG
T ss_pred             ccC-CEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCcc--CCcceEEeHHH
Confidence            997 999999987653333 677778889999999876543210       1167889999999965  45889999999


Q ss_pred             HHHHHHHhcCCCee-eEEEeC
Q 019822          316 IDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       316 ~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      +++||+.+.+++.. |+|+++
T Consensus       333 ~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          333 VADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHhCCCCceEEEeC
Confidence            99999999887765 999875

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=3.6e-42  Score=313.87  Aligned_cols=274  Identities=22%  Similarity=0.198  Sum_probs=236.0

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|+...                            ..+ 
T Consensus        44 D~~~~~g~~~~~~~p~v~G-~e~-~G~V~~vG~~v~~~~~GdrV~~~~----------------------------~~~-   92 (325)
T 3jyn_A           44 DTYYRSGLYPAPFLPSGLG-AEG-AGVVEAVGDEVTRFKVGDRVAYGT----------------------------GPL-   92 (325)
T ss_dssp             HHHHHHTSSCCSSSSBCCC-CCE-EEEEEEECTTCCSCCTTCEEEESS----------------------------SSS-
T ss_pred             HHHHHCCCCCCCCCCCCCC-cee-EEEEEEECCCCCCCCCCCEEEEec----------------------------CCC-
Confidence            5666778887767899999 999 999999999999999999997531                            112 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL  164 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~  164 (335)
                                       |+|+||+.+|++.++++|+++++++||++++..+|+|+++.+.++++++++|||+|+ |++|+
T Consensus        93 -----------------G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~  155 (325)
T 3jyn_A           93 -----------------GAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGS  155 (325)
T ss_dssp             -----------------CCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHH
T ss_pred             -----------------ccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHH
Confidence                             389999999999999999999999999999999999999988889999999999985 99999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+|+..|+ +|+++++++++++.++++|+++++++++   .++.+.+++.++++++|++|||+|+. .+..++++++
T Consensus       156 ~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~  230 (325)
T 3jyn_A          156 LACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSH---EDVAKRVLELTDGKKCPVVYDGVGQD-TWLTSLDSVA  230 (325)
T ss_dssp             HHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHTTTCCEEEEEESSCGG-GHHHHHTTEE
T ss_pred             HHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhc
Confidence            99999999999 9999999999999999999999999987   78999999999888999999999985 7899999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhc-CcEEEEeeccCCC-CcCcH----HHHHHHHhCCCCCCCCceeEEeechhHHH
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACG-GRTLKGTTFGGIK-TKSDL----PTLLDKCKNKEFKLHQLLTHHVKLEEIDK  318 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~-~~~~~----~~~~~~i~~~~~~~~~~~~~~~~l~~~~e  318 (335)
                      ++ |+++.+|...+...+++...+..+ ++.+.+..++.+. .+.++    +++++++++|++++.  ++++|||+++++
T Consensus       231 ~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~  307 (325)
T 3jyn_A          231 PR-GLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAAK  307 (325)
T ss_dssp             EE-EEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHHH
T ss_pred             CC-CEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCc--cccEEcHHHHHH
Confidence            98 999999987653335666666666 5677655433321 23333    478999999998876  678999999999


Q ss_pred             HHHHhcCCCee-eEEEeC
Q 019822          319 AIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       319 a~~~~~~~~~~-k~vi~~  335 (335)
                      ||+.+.+++.. |+|+.+
T Consensus       308 A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          308 AQIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHHHTTCCCSCEEEEC
T ss_pred             HHHHHHcCCCCceEEEeC
Confidence            99999988775 998864

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=9.7e-42  Score=312.20  Aligned_cols=271  Identities=20%  Similarity=0.223  Sum_probs=235.9

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++. .+|.++| ||+ +|+|+++|++|++|++||+|++..                              + 
T Consensus        51 D~~~~~G~~~~-~~P~i~G-~e~-~G~V~~vG~~v~~~~~GdrV~~~~------------------------------~-   96 (334)
T 3qwb_A           51 ESYFRKGIYPC-EKPYVLG-REA-SGTVVAKGKGVTNFEVGDQVAYIS------------------------------N-   96 (334)
T ss_dssp             HHHHHHTSSCC-CSSEECC-SEE-EEEEEEECTTCCSCCTTCEEEEEC------------------------------S-
T ss_pred             HHHHHCCCCCC-CCCCccc-cce-EEEEEEECCCCCCCCCCCEEEEee------------------------------C-
Confidence            55566777763 5799999 999 999999999999999999997431                              1 


Q ss_pred             CccccccCceeecccccccceeeEEec-ccceEEcCCCCCccc---ccccccchhhhhHHHHHhcCCCCCCEEEEEc-CC
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVID-ANYVVKVDPSIDPSD---ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LG  160 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~~~~lp~~~~~~~---aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G-~g  160 (335)
                                       |+|+||+.++ ++.++++|+++++++   +|++++.+.|||+++.+..+++++++|||+| +|
T Consensus        97 -----------------G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g  159 (334)
T 3qwb_A           97 -----------------STFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAG  159 (334)
T ss_dssp             -----------------SCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTB
T ss_pred             -----------------CcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCC
Confidence                             3899999999 999999999999999   8888889999999988878999999999999 59


Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      ++|++++|+++..|+ +|+++++++++++.++++|+++++++++   .++.+.+++.++++++|++|||+|.. .++.++
T Consensus       160 ~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~---~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~  234 (334)
T 3qwb_A          160 GVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASK---EDILRQVLKFTNGKGVDASFDSVGKD-TFEISL  234 (334)
T ss_dssp             HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEECCGGG-GHHHHH
T ss_pred             HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCC---chHHHHHHHHhCCCCceEEEECCChH-HHHHHH
Confidence            999999999999999 9999999999999999999999999987   78999999999888999999999985 889999


Q ss_pred             HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCC-CcC----cHHHHHHHHhCCCCCCCCceeEEeechh
Q 019822          241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK-TKS----DLPTLLDKCKNKEFKLHQLLTHHVKLEE  315 (335)
Q Consensus       241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~----~~~~~~~~i~~~~~~~~~~~~~~~~l~~  315 (335)
                      ++++++ |+++.+|...+...+++...+..+++++.++....+. .+.    .++++++++++|++++.  ++++|||++
T Consensus       235 ~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~  311 (334)
T 3qwb_A          235 AALKRK-GVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRD  311 (334)
T ss_dssp             HHEEEE-EEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC--EEEEEEGGG
T ss_pred             HHhccC-CEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc--eeeEEcHHH
Confidence            999998 9999999876534456677777899999987655432 122    24688999999998775  889999999


Q ss_pred             HHHHHHHhcCCCee-eEEEeC
Q 019822          316 IDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       316 ~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      +++||+.+.+++.. |+|+++
T Consensus       312 ~~~A~~~~~~~~~~gKvvi~~  332 (334)
T 3qwb_A          312 YRTAAADIESRKTVGKLVLEI  332 (334)
T ss_dssp             HHHHHHHHHTTCCCBEEEEEC
T ss_pred             HHHHHHHHHhCCCceEEEEec
Confidence            99999999888764 999874

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=6.1e-42  Score=314.41  Aligned_cols=270  Identities=21%  Similarity=0.280  Sum_probs=226.5

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++++ |++||+|+..                             ..+
T Consensus        64 D~~~~~g~~~~~~~~p~v~G-~E~-~G~V~~vG~~v~-~~vGDrV~~~-----------------------------~~~  111 (342)
T 4eye_A           64 DYLMTKGEYQLKMEPPFVPG-IET-AGVVRSAPEGSG-IKPGDRVMAF-----------------------------NFI  111 (342)
T ss_dssp             HHHHHTTCSSSCCCSSBCCC-SEE-EEEEEECCTTSS-CCTTCEEEEE-----------------------------CSS
T ss_pred             HHHHhcCCCCCCCCCCCccc-eeE-EEEEEEECCCCC-CCCCCEEEEe-----------------------------cCC
Confidence            55667787764 47899999 999 999999999999 9999999643                             222


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG  163 (335)
                                        |+|+||+.++++.++++|+++++++||+++++++|||+++.+.++++++++|||+|+ |++|
T Consensus       112 ------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG  173 (342)
T 4eye_A          112 ------------------GGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIG  173 (342)
T ss_dssp             ------------------CCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHH
T ss_pred             ------------------CcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH
Confidence                              389999999999999999999999999999999999999988899999999999997 9999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+.+|+ +|++++++++++++++++|++.+++++    .++.+.+++.++++++|++|||+|++ .+..+++++
T Consensus       174 ~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~----~~~~~~v~~~~~~~g~Dvvid~~g~~-~~~~~~~~l  247 (342)
T 4eye_A          174 TAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE----EGWAKAVREATGGAGVDMVVDPIGGP-AFDDAVRTL  247 (342)
T ss_dssp             HHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS----TTHHHHHHHHTTTSCEEEEEESCC---CHHHHHHTE
T ss_pred             HHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc----hhHHHHHHHHhCCCCceEEEECCchh-HHHHHHHhh
Confidence            999999999999 999999999999999999999998876    46888899999888999999999987 789999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCC------CcCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      +++ |+++.+|...+....++...++.+++++.|+..+.+.      ..+.+..++++++++ +  .++++++|+|++++
T Consensus       248 ~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l--~~~i~~~~~l~~~~  323 (342)
T 4eye_A          248 ASE-GRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-M--RPPVSARIPLSEGR  323 (342)
T ss_dssp             EEE-EEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-C--CCCEEEEEEGGGHH
T ss_pred             cCC-CEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-C--CCCcceEEeHHHHH
Confidence            998 9999999765433345555577799999998754331      123578899999999 4  45588999999999


Q ss_pred             HHHHHhcCCCee-eEEEeC
Q 019822          318 KAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       318 ea~~~~~~~~~~-k~vi~~  335 (335)
                      +||+.+.+++.. |+|+++
T Consensus       324 ~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          324 QALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHhCCCCceEEEeC
Confidence            999999988865 999874

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=2.3e-41  Score=310.38  Aligned_cols=272  Identities=18%  Similarity=0.238  Sum_probs=229.8

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|++|++||+|+..                             ..+
T Consensus        48 D~~~~~g~~~~~~~~p~i~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~-----------------------------~~~   96 (340)
T 3gms_A           48 DLIPITGAYAHRIPLPNIPG-YEG-VGIVENVGAFVSRELIGKRVLPL-----------------------------RGE   96 (340)
T ss_dssp             HHGGGGTTTTTTSCSSBCCC-SCC-EEEEEEECTTSCGGGTTCEEEEC-----------------------------SSS
T ss_pred             HHHHhcCCCCCCCCCCCcCC-cce-EEEEEEeCCCCCCCCCCCEEEec-----------------------------CCC
Confidence            56667788765 57899999 999 99999999999999999999632                             222


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG  163 (335)
                                        |+|+||+.+|++.++++|+++++++||++++.++|||+++.+.++++++++|||+|+ |++|
T Consensus        97 ------------------G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG  158 (340)
T 3gms_A           97 ------------------GTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIG  158 (340)
T ss_dssp             ------------------CSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHH
T ss_pred             ------------------ccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHH
Confidence                              389999999999999999999999999999999999999989999999999999997 6999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+..|+ +|+++++++++++.++++|+++++++++   .++.+.++++++++++|++|||+|++ .....++++
T Consensus       159 ~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~---~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l  233 (340)
T 3gms_A          159 HLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTST---APLYETVMELTNGIGADAAIDSIGGP-DGNELAFSL  233 (340)
T ss_dssp             HHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEESSCHH-HHHHHHHTE
T ss_pred             HHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCc---ccHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHHh
Confidence            999999999999 9999999999999999999999999887   78999999999888999999999988 456677999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHh-hcCcEEEEeeccCC-------CCcCcHHHHHHHHhCCCCCCCCceeEEeechh
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALA-CGGRTLKGTTFGGI-------KTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE  315 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~  315 (335)
                      +++ |+++.+|...+.  .++...+. ..++.+.......+       ...++++++++++++|++++.. ++++|||++
T Consensus       234 ~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~  309 (340)
T 3gms_A          234 RPN-GHFLTIGLLSGI--QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELAD  309 (340)
T ss_dssp             EEE-EEEEECCCTTSC--CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGG
T ss_pred             cCC-CEEEEEeecCCC--CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHH
Confidence            997 999999987643  33333333 23445444332111       1135688999999999998865 678999999


Q ss_pred             HHHHHHHhcCCC-e-eeEEEeC
Q 019822          316 IDKAIQLLKQPD-C-VKVLITI  335 (335)
Q Consensus       316 ~~ea~~~~~~~~-~-~k~vi~~  335 (335)
                      +++||+.+.+++ . .|+++++
T Consensus       310 ~~~A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          310 VKAAVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             HHHHHHHHHCTTCCSSEEEEEC
T ss_pred             HHHHHHHHHhcCCCCCeEEEEE
Confidence            999999999887 4 5999874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=2.8e-41  Score=311.45  Aligned_cols=275  Identities=15%  Similarity=0.192  Sum_probs=230.3

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCC-CcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEV-KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++| ++|++||+|+..                             ..
T Consensus        65 D~~~~~G~~~~~~~~p~v~G-~E~-~G~V~~vG~~v~~~~~vGdrV~~~-----------------------------~~  113 (354)
T 2j8z_A           65 DLMQRQGQYDPPPGASNILG-LEA-SGHVAELGPGCQGHWKIGDTAMAL-----------------------------LP  113 (354)
T ss_dssp             HHHHHHTSSCCCTTSCSSSC-SEE-EEEEEEECSCC--CCCTTCEEEEE-----------------------------CS
T ss_pred             HHHHhCCCCCCCCCCCcccc-eee-EEEEEEECCCcCCCCCCCCEEEEe-----------------------------cC
Confidence            45556676664 35789999 999 99999999999 999999999642                             22


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTV  162 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~v  162 (335)
                      +                  |+|+||+.+|++.++++|+++++++||+++++++|||+++.+.++++++++|||+|+ |++
T Consensus       114 ~------------------G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggi  175 (354)
T 2j8z_A          114 G------------------GGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGV  175 (354)
T ss_dssp             S------------------CCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHH
T ss_pred             C------------------CcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHH
Confidence            2                  389999999999999999999999999999999999999988899999999999985 999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |++++|+++..|+ +|+++++++++++.++++|++.++++.+   .++.+.+++.+++.++|++|||+|++ .+..++++
T Consensus       176 G~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~  250 (354)
T 2j8z_A          176 GTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKK---EDFSEATLKFTKGAGVNLILDCIGGS-YWEKNVNC  250 (354)
T ss_dssp             HHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHTTTSCEEEEEESSCGG-GHHHHHHH
T ss_pred             HHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC---hHHHHHHHHHhcCCCceEEEECCCch-HHHHHHHh
Confidence            9999999999999 9999999999999999999999999887   77888888888777899999999987 78999999


Q ss_pred             hccCCeEEEEEccCCCccccchh-HHHhhcCcEEEEeeccCCCCc------C-cHHHHHHHHhCC-CCCCCCceeEEeec
Q 019822          243 TKVGKGKVIVIGVGVDAMVPLNV-IALACGGRTLKGTTFGGIKTK------S-DLPTLLDKCKNK-EFKLHQLLTHHVKL  313 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~------~-~~~~~~~~i~~~-~~~~~~~~~~~~~l  313 (335)
                      ++++ |+++.+|...+...+++. ..++.+++++.++........      . .++++++++++| ++++.++++++|||
T Consensus       251 l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l  329 (354)
T 2j8z_A          251 LALD-GRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPV  329 (354)
T ss_dssp             EEEE-EEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEG
T ss_pred             ccCC-CEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcH
Confidence            9997 999999976543355666 677779999999865432110      0 123577888899 44456678999999


Q ss_pred             hhHHHHHHHhcCCCe-eeEEEeC
Q 019822          314 EEIDKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       314 ~~~~ea~~~~~~~~~-~k~vi~~  335 (335)
                      +++++||+.+.+++. .|+++++
T Consensus       330 ~~~~~A~~~~~~~~~~gKvvv~~  352 (354)
T 2j8z_A          330 TEIQEAHKYMEANKNIGKIVLEL  352 (354)
T ss_dssp             GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHhCCCCceEEEec
Confidence            999999999988765 4999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=3.3e-42  Score=317.14  Aligned_cols=274  Identities=14%  Similarity=0.092  Sum_probs=228.7

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCC-CcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEV-KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++| ++|++||+|++..                          |...
T Consensus        65 D~~~~~G~~~~~~~~p~v~G-~E~-~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------g~~~  116 (349)
T 3pi7_A           65 DVAFIKGQYGQPRVKGRPAG-FEG-VGTIVAGGDEPYAKSLVGKRVAFAT--------------------------GLSN  116 (349)
T ss_dssp             HHHHHTTCSSSCBCTTSBCC-SEE-EEEEEEECSSHHHHHHTTCEEEEEC--------------------------TTSS
T ss_pred             HHHHhcccCCCCCCCCCCcc-ceE-EEEEEEECCCccCCCCCCCEEEEec--------------------------cCCC
Confidence            55666777764 46899999 999 99999999999 9999999998642                          2223


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCC-CEEEEEc-CCH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG-SSVAVLG-LGT  161 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~-~~VlI~G-~g~  161 (335)
                      +                  |+|+||+.+|++.++++|+++++++||++++.++|||+ ++++++ .++ ++|||+| +|+
T Consensus       117 ~------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~-~~~~~~-~~g~~~vli~gg~g~  176 (349)
T 3pi7_A          117 W------------------GSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIA-MFDIVK-QEGEKAFVMTAGASQ  176 (349)
T ss_dssp             C------------------CSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHH-HHHHHH-HHCCSEEEESSTTSH
T ss_pred             C------------------ccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHH-HHHHHh-hCCCCEEEEeCCCcH
Confidence            3                  39999999999999999999999999999999999996 456666 666 6888885 599


Q ss_pred             HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822          162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE  241 (335)
Q Consensus       162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~  241 (335)
                      +|++++|+|+.+|+ +|++++++++++++++++|+++++++++   .++.+.++++++++++|++|||+|++ .+..+++
T Consensus       177 vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~v~~~~~~~g~D~vid~~g~~-~~~~~~~  251 (349)
T 3pi7_A          177 LCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEKA---PDFEATLREVMKAEQPRIFLDAVTGP-LASAIFN  251 (349)
T ss_dssp             HHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSEEEETTS---TTHHHHHHHHHHHHCCCEEEESSCHH-HHHHHHH
T ss_pred             HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCc---HHHHHHHHHHhcCCCCcEEEECCCCh-hHHHHHh
Confidence            99999999999999 9999999999999999999999999987   88999999998877999999999987 5689999


Q ss_pred             hhccCCeEEEEEccCCCccccchh-HHHhhcCcEEEEeeccCCC------CcCcHHHHHHHHhCCCCCCCCceeEEeech
Q 019822          242 TTKVGKGKVIVIGVGVDAMVPLNV-IALACGGRTLKGTTFGGIK------TKSDLPTLLDKCKNKEFKLHQLLTHHVKLE  314 (335)
Q Consensus       242 ~l~~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~  314 (335)
                      +++++ |+++.+|........++. ..++.+++++.++..+++.      ..+.++.+++++++|+++  ++++++|||+
T Consensus       252 ~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~  328 (349)
T 3pi7_A          252 AMPKR-ARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWS--TDVTAVVPLA  328 (349)
T ss_dssp             HSCTT-CEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCC--C-CCEEEEHH
T ss_pred             hhcCC-CEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcc--cccceEEcHH
Confidence            99998 999999976654556666 7778899999998754421      124577888899999974  4588999999


Q ss_pred             hHHHHHHHhcCCCeeeEEEeC
Q 019822          315 EIDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       315 ~~~ea~~~~~~~~~~k~vi~~  335 (335)
                      ++++||+.+.++...|+|+++
T Consensus       329 ~~~~A~~~~~~~~~gKvvl~p  349 (349)
T 3pi7_A          329 EAIAWVPAELTKPNGKVFIRP  349 (349)
T ss_dssp             HHHHHHHHHHTSSSSCEEEEC
T ss_pred             HHHHHHHHHhCCCCceEEEeC
Confidence            999999976666566999875

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.1e-40  Score=309.36  Aligned_cols=278  Identities=14%  Similarity=0.140  Sum_probs=223.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.| +  ..+|.++| ||+ +|+|+++|++|++|++||+|+       +.|..|..+              ...+ 
T Consensus        52 D~~~~~g-~--~~~p~v~G-~e~-~G~V~~vG~~v~~~~~GdrV~-------~~~~~~~~~--------------~~~~-  104 (371)
T 3gqv_A           52 DTSMRGQ-F--ATPWAFLG-TDY-AGTVVAVGSDVTHIQVGDRVY-------GAQNEMCPR--------------TPDQ-  104 (371)
T ss_dssp             GGC--------CCTTSCCC-SEE-EEEEEEECTTCCSCCTTCEEE-------EECCTTCTT--------------CTTC-
T ss_pred             HHHHhhc-C--CCCCccCc-ccc-EEEEEEeCCCCCCCCCCCEEE-------EeccCCCCC--------------CCCC-
Confidence            4444444 2  24689999 999 999999999999999999994       445555322              1222 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHh-cCC-----------CCCCE
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKE-AKV-----------EKGSS  153 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~-~~~-----------~~~~~  153 (335)
                                       |+|+||+.+|++.++++|+++++++||++++++.|||+++.+. .++           +++++
T Consensus       105 -----------------G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~  167 (371)
T 3gqv_A          105 -----------------GAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVY  167 (371)
T ss_dssp             -----------------CSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCE
T ss_pred             -----------------CcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcE
Confidence                             3899999999999999999999999999999999999999777 553           89999


Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          154 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       154 VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      |||+|+ |++|++++|+|+.+|+ +|+++. +++++++++++|+++++++++   .++.+.+++++++ ++|++|||+|+
T Consensus       168 VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~---~~~~~~v~~~t~g-~~d~v~d~~g~  241 (371)
T 3gqv_A          168 VLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDYRA---PNLAQTIRTYTKN-NLRYALDCITN  241 (371)
T ss_dssp             EEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTS---TTHHHHHHHHTTT-CCCEEEESSCS
T ss_pred             EEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEECCC---chHHHHHHHHccC-CccEEEECCCc
Confidence            999998 9999999999999999 999997 799999999999999999988   8899999999988 59999999999


Q ss_pred             hHHHHHHHHhh-ccCCeEEEEEccCCC-----ccccch---hHHHhhcCcEEEEeeccCCCC------cCcHHHHHHHHh
Q 019822          233 PSLLSEALETT-KVGKGKVIVIGVGVD-----AMVPLN---VIALACGGRTLKGTTFGGIKT------KSDLPTLLDKCK  297 (335)
Q Consensus       233 ~~~~~~~~~~l-~~~~G~~v~~g~~~~-----~~~~~~---~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~i~  297 (335)
                      +..+..+++++ +++ |+++.+|....     ...+..   ...++.+++++.|+.......      .+.+..++++++
T Consensus       242 ~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~  320 (371)
T 3gqv_A          242 VESTTFCFAAIGRAG-GHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVE  320 (371)
T ss_dssp             HHHHHHHHHHSCTTC-EEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHhhcCC-CEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            87889999999 587 99999985442     111111   234556888887764322111      112347889999


Q ss_pred             CCCCCCCCceeEEeechhHHHHHHHhcCCCe-e-eEEEe
Q 019822          298 NKEFKLHQLLTHHVKLEEIDKAIQLLKQPDC-V-KVLIT  334 (335)
Q Consensus       298 ~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~-~-k~vi~  334 (335)
                      +|++++...+++.|+|+++++||+.+.+++. . |+|+.
T Consensus       321 ~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~  359 (371)
T 3gqv_A          321 DGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVR  359 (371)
T ss_dssp             TTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEE
T ss_pred             CCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEE
Confidence            9999999888888999999999999998865 3 66664

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=6.9e-41  Score=309.71  Aligned_cols=271  Identities=17%  Similarity=0.187  Sum_probs=227.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|+...                          +...+ 
T Consensus        68 D~~~~~g~~~~~~~p~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~--------------------------~~~~~-  118 (363)
T 4dvj_A           68 DYKVRRSTPPDGTDWKVIG-YDA-AGIVSAVGPDVTLFRPGDEVFYAG--------------------------SIIRP-  118 (363)
T ss_dssp             HHHHHHHCCC--CCSBCCC-CCE-EEEEEEECTTCCSCCTTCEEEECC--------------------------CTTSC-
T ss_pred             HHHHHcCCCCCCCCCCccc-cee-EEEEEEeCCCCCCCCCCCEEEEcc--------------------------CCCCC-
Confidence            4555667777667899999 999 999999999999999999997532                          12222 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCC-----CCCEEEEEc-C
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE-----KGSSVAVLG-L  159 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-----~~~~VlI~G-~  159 (335)
                                       |+|+||+.+|++.++++|+++++++||+++++++|||+++++.++++     ++++|||+| +
T Consensus       119 -----------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~  181 (363)
T 4dvj_A          119 -----------------GTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGA  181 (363)
T ss_dssp             -----------------CSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTT
T ss_pred             -----------------ccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCC
Confidence                             38999999999999999999999999999999999999998888888     899999998 5


Q ss_pred             CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHH
Q 019822          160 GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSE  238 (335)
Q Consensus       160 g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~  238 (335)
                      |++|++++|+|+.+ |+ +|++++++++++++++++|+++++++++    ++.+.++++ .+.++|+||||+|++..++.
T Consensus       182 G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~~~lGad~vi~~~~----~~~~~v~~~-~~~g~Dvvid~~g~~~~~~~  255 (363)
T 4dvj_A          182 GGVGSIAVQIARQRTDL-TVIATASRPETQEWVKSLGAHHVIDHSK----PLAAEVAAL-GLGAPAFVFSTTHTDKHAAE  255 (363)
T ss_dssp             SHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHTTCSEEECTTS----CHHHHHHTT-CSCCEEEEEECSCHHHHHHH
T ss_pred             CHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC----CHHHHHHHh-cCCCceEEEECCCchhhHHH
Confidence            99999999999985 77 9999999999999999999999999874    577888887 55599999999998878899


Q ss_pred             HHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC---C--C----cCcHHHHHHHHhCCCCCCCCceeE
Q 019822          239 ALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI---K--T----KSDLPTLLDKCKNKEFKLHQLLTH  309 (335)
Q Consensus       239 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~--~----~~~~~~~~~~i~~~~~~~~~~~~~  309 (335)
                      ++++++++ |+++.++..    .+++...+..+++++.++.....   .  .    .+.+..+++++++|++++.  +++
T Consensus       256 ~~~~l~~~-G~iv~~g~~----~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~  328 (363)
T 4dvj_A          256 IADLIAPQ-GRFCLIDDP----SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTT--LTN  328 (363)
T ss_dssp             HHHHSCTT-CEEEECSCC----SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCC--EEE
T ss_pred             HHHHhcCC-CEEEEECCC----CccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeecc--ccc
Confidence            99999998 999999643    34556667778999988654321   0  0    2357889999999997754  666


Q ss_pred             Ee---echhHHHHHHHhcCCCee-eEEEeC
Q 019822          310 HV---KLEEIDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       310 ~~---~l~~~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      ++   +++++++||+.+.+++.. |+|+++
T Consensus       329 ~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          329 RLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             EECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             eecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence            66   999999999999888765 999875

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=3.1e-40  Score=303.60  Aligned_cols=269  Identities=21%  Similarity=0.200  Sum_probs=225.4

Q ss_pred             EeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCC
Q 019822            7 LISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDST   86 (335)
Q Consensus         7 ~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~   86 (335)
                      ++.+.|.  ...+|.++| ||+ +|+|+++|++|++|++||+|+...                          +...+  
T Consensus        49 ~~~~~g~--~~~~p~i~G-~e~-~G~V~~vG~~v~~~~~GdrV~~~~--------------------------~~~~~--   96 (346)
T 3fbg_A           49 TKQRLMD--VSKAPRVLG-FDA-IGVVESVGNEVTMFNQGDIVYYSG--------------------------SPDQN--   96 (346)
T ss_dssp             HHHTTSC--CSSSCBCCC-CCE-EEEEEEECTTCCSCCTTCEEEECC--------------------------CTTSC--
T ss_pred             HHHHhCC--CCCCCcCcC-Ccc-EEEEEEeCCCCCcCCCCCEEEEcC--------------------------CCCCC--
Confidence            3344454  236799999 999 999999999999999999997532                          11122  


Q ss_pred             ccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCC------CCCEEEEEc-C
Q 019822           87 SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVE------KGSSVAVLG-L  159 (335)
Q Consensus        87 ~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~------~~~~VlI~G-~  159 (335)
                                      |+|+||+.+|++.++++|+++++++||++++++.|||+++.+.++++      ++++|||+| +
T Consensus        97 ----------------G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~  160 (346)
T 3fbg_A           97 ----------------GSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGA  160 (346)
T ss_dssp             ----------------CSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTT
T ss_pred             ----------------cceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCC
Confidence                            38999999999999999999999999999999999999998889988      999999995 5


Q ss_pred             CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHH
Q 019822          160 GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA  239 (335)
Q Consensus       160 g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~  239 (335)
                      |++|++++|+|+.+|+ +|++++++++++++++++|+++++++++    ++.+.+++. .++++|+||||+|++..++.+
T Consensus       161 G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~----~~~~~~~~~-~~~g~Dvv~d~~g~~~~~~~~  234 (346)
T 3fbg_A          161 GGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHKE----SLLNQFKTQ-GIELVDYVFCTFNTDMYYDDM  234 (346)
T ss_dssp             SHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTTS----CHHHHHHHH-TCCCEEEEEESSCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECCc----cHHHHHHHh-CCCCccEEEECCCchHHHHHH
Confidence            9999999999999999 9999999999999999999999999874    577888887 566999999999988778999


Q ss_pred             HHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC---CC------cCcHHHHHHHHhCCCCCCCCceeEE
Q 019822          240 LETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI---KT------KSDLPTLLDKCKNKEFKLHQLLTHH  310 (335)
Q Consensus       240 ~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~------~~~~~~~~~~i~~~~~~~~~~~~~~  310 (335)
                      +++++++ |+++.++...   .+++...+..+++++.++.....   ..      .+.+..+++++++|++++  .++++
T Consensus       235 ~~~l~~~-G~iv~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~  308 (346)
T 3fbg_A          235 IQLVKPR-GHIATIVAFE---NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQP--TTTKV  308 (346)
T ss_dssp             HHHEEEE-EEEEESSCCS---SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCC--CEEEE
T ss_pred             HHHhccC-CEEEEECCCC---CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEEC--Cccce
Confidence            9999998 9999887532   34555567778999988653321   00      234778999999999764  47777


Q ss_pred             e---echhHHHHHHHhcCCCee-eEEEeC
Q 019822          311 V---KLEEIDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       311 ~---~l~~~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      +   +++++++||+.+.+++.. |+|+++
T Consensus       309 ~~~~~l~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          309 IEGLTTENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             EESCCHHHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ecCCCHHHHHHHHHHHhcCCcceEEEEec
Confidence            7   899999999999998865 999874

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.5e-40  Score=302.92  Aligned_cols=271  Identities=23%  Similarity=0.284  Sum_probs=227.3

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|++|++||+|++.+.                            .+
T Consensus        73 D~~~~~G~~~~~~~~P~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~----------------------------~~  122 (351)
T 1yb5_A           73 ETYIRSGTYSRKPLLPYTPG-SDV-AGVIEAVGDNASAFKKGDRVFTSST----------------------------IS  122 (351)
T ss_dssp             HHHHHHTCSSCCCCSSBCCC-SCE-EEEEEEECTTCTTCCTTCEEEESCC----------------------------SS
T ss_pred             HHHHhCCCCCCCCCCCCcCC-cee-EEEEEEECCCCCCCCCCCEEEEeCC----------------------------CC
Confidence            44556676653 46899999 999 9999999999999999999975321                            11


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG  163 (335)
                                        |+|+||+.+|++.++++|+++++++||+++++++|||+++.+.++++++++|||+|+ |++|
T Consensus       123 ------------------G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG  184 (351)
T 1yb5_A          123 ------------------GGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVG  184 (351)
T ss_dssp             ------------------CSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHH
T ss_pred             ------------------CcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHH
Confidence                              389999999999999999999999999999999999999987899999999999997 9999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+++..|+ +|+++++++++.+.++++|++.++++.+   .++.+.+++.++++++|++|||+|++ .+..+++++
T Consensus       185 ~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~G~~-~~~~~~~~l  259 (351)
T 1yb5_A          185 LAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHRE---VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLL  259 (351)
T ss_dssp             HHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS---TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHE
T ss_pred             HHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCC---chHHHHHHHHcCCCCcEEEEECCChH-HHHHHHHhc
Confidence            999999999999 9999999999999999999999999887   77888888888877999999999986 778999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCCcCcH----HHHHHHHhCCCCCCCCceeEEeechhHHHH
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDL----PTLLDKCKNKEFKLHQLLTHHVKLEEIDKA  319 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea  319 (335)
                      +++ |+++.+|...  ..+++...++.+++++.|+..... ..+++    +.+.+++.+++++  ++++++|||+++++|
T Consensus       260 ~~~-G~iv~~g~~~--~~~~~~~~~~~~~~~i~g~~~~~~-~~~~~~~~~~~l~~~~~~g~l~--~~i~~~~~l~~~~~A  333 (351)
T 1yb5_A          260 SHG-GRVIVVGSRG--TIEINPRDTMAKESSIIGVTLFSS-TKEEFQQYAAALQAGMEIGWLK--PVIGSQYPLEKVAEA  333 (351)
T ss_dssp             EEE-EEEEECCCCS--CEEECTHHHHTTTCEEEECCGGGC-CHHHHHHHHHHHHHHHHHTCCC--CCEEEEEEGGGHHHH
T ss_pred             cCC-CEEEEEecCC--CCccCHHHHHhCCcEEEEEEeecC-CHHHHHHHHHHHHHHHHCCCcc--CccceEEcHHHHHHH
Confidence            997 9999999653  345556667779999999864332 12333    3455677788754  458899999999999


Q ss_pred             HHH-hcCCC-eeeEEEeC
Q 019822          320 IQL-LKQPD-CVKVLITI  335 (335)
Q Consensus       320 ~~~-~~~~~-~~k~vi~~  335 (335)
                      ++. +.+++ ..|+|+++
T Consensus       334 ~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          334 HENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHHSSCCSSEEEEEC
T ss_pred             HHHHHHhCCCCeEEEEeC
Confidence            998 66544 45999874

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=2.3e-40  Score=302.96  Aligned_cols=274  Identities=21%  Similarity=0.219  Sum_probs=227.5

Q ss_pred             EEeEeecCC--CC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc
Q 019822            6 TLISFALKD--SQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM   82 (335)
Q Consensus         6 d~~~~~g~~--~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~   82 (335)
                      |++.+.|.+  +. ..+|.++| ||+ +|+|+++|++|++|++||+|+..+.                            
T Consensus        44 D~~~~~G~~~~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~~GdrV~~~~~----------------------------   93 (333)
T 1wly_A           44 DTYHRAGIPHPLVVGEPPIVVG-FEA-AAVVEEVGPGVTDFTVGERVCTCLP----------------------------   93 (333)
T ss_dssp             HHHHHC----------CCEECC-CEE-EEEEEEECTTCCSCCTTCEEEECSS----------------------------
T ss_pred             HHHHhCCCcCCCCCCCCCcccc-cee-EEEEEEECCCCCCCCCCCEEEEecC----------------------------
Confidence            445556665  22 45799999 999 9999999999999999999964311                            


Q ss_pred             cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCccc--ccccccchhhhhHHHHHhcCCCCCCEEEEEcC-
Q 019822           83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSD--ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-  159 (335)
Q Consensus        83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~--aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-  159 (335)
                      .+                  |+|+||+.+|++.++++|+++++++  ||+++++++|||+++.+.++++++++|||+|+ 
T Consensus        94 ~~------------------G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~  155 (333)
T 1wly_A           94 PL------------------GAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAA  155 (333)
T ss_dssp             SC------------------CCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTT
T ss_pred             CC------------------CcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCc
Confidence            01                  3899999999999999999999999  89999999999999987889999999999996 


Q ss_pred             CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHH
Q 019822          160 GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEA  239 (335)
Q Consensus       160 g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~  239 (335)
                      |++|++++|+++..|+ +|+++++++++.+.++++|++.++++.+   .++.+.+.+.+++.++|++|||+|+. .++.+
T Consensus       156 ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~---~~~~~~i~~~~~~~~~d~vi~~~g~~-~~~~~  230 (333)
T 1wly_A          156 GGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYST---QDFAEVVREITGGKGVDVVYDSIGKD-TLQKS  230 (333)
T ss_dssp             STTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHHTTCCEEEEEECSCTT-THHHH
T ss_pred             cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC---HHHHHHHHHHhCCCCCeEEEECCcHH-HHHHH
Confidence            9999999999999999 9999999999999999999999998877   67888888888777899999999985 78999


Q ss_pred             HHhhccCCeEEEEEccCCCccccchhH-HHhhcC--cEEEEeeccCCCC----cCcHHHHHHHHhCCCCCCCCceeEEee
Q 019822          240 LETTKVGKGKVIVIGVGVDAMVPLNVI-ALACGG--RTLKGTTFGGIKT----KSDLPTLLDKCKNKEFKLHQLLTHHVK  312 (335)
Q Consensus       240 ~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~--~~~~g~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~  312 (335)
                      +++++++ |+++.+|...+...+++.. .++.++  +++.|+.......    .+.++++++++.+|++++  +++++||
T Consensus       231 ~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~  307 (333)
T 1wly_A          231 LDCLRPR-GMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHS--SVAKTFP  307 (333)
T ss_dssp             HHTEEEE-EEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCC--CEEEEEE
T ss_pred             HHhhccC-CEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCC--CcceEEe
Confidence            9999997 9999999765433456665 666788  8888875421111    135788999999999754  5889999


Q ss_pred             chhHHHHHHHhcCCCe-eeEEEeC
Q 019822          313 LEEIDKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       313 l~~~~ea~~~~~~~~~-~k~vi~~  335 (335)
                      |+++++||+.+.+++. .|+++++
T Consensus       308 l~~~~~A~~~~~~~~~~gKvvi~~  331 (333)
T 1wly_A          308 LREAAAAHKYMGGRQTIGSIVLLP  331 (333)
T ss_dssp             GGGHHHHHHHHHHCSCCSEEEEET
T ss_pred             HHHHHHHHHHHHcCCCceEEEEEe
Confidence            9999999999987765 4999864

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-40  Score=302.35  Aligned_cols=274  Identities=19%  Similarity=0.165  Sum_probs=230.2

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|...                           | ..+ 
T Consensus        44 D~~~~~g~~~~~~~p~v~G-~E~-~G~V~~vG~~v~~~~~GdrV~~~---------------------------g-~~~-   92 (327)
T 1qor_A           44 DTYIRSGLYPPPSLPSGLG-TEA-AGIVSKVGSGVKHIKAGDRVVYA---------------------------Q-SAL-   92 (327)
T ss_dssp             HHHHHHTSSCCSSSSBCCC-SCE-EEEEEEECTTCCSCCTTCEEEES---------------------------C-CSS-
T ss_pred             HHHHhCCCCCCCCCCCCCC-cee-EEEEEEECCCCCCCCCCCEEEEC---------------------------C-CCC-
Confidence            5556677776556899999 999 99999999999999999999421                           0 011 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL  164 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~  164 (335)
                                       |+|+||+.+|++.++++|+++++++||+++++++|||+++.+.++++++++|||+|+ |++|+
T Consensus        93 -----------------G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~  155 (327)
T 1qor_A           93 -----------------GAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGL  155 (327)
T ss_dssp             -----------------CCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHH
T ss_pred             -----------------ceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHH
Confidence                             389999999999999999999999999999999999999977889999999999995 99999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+++..|+ +|+++++++++.+.++++|++.++++.+   .++.+.+.+.+++.++|++||++|. ..++.++++++
T Consensus       156 ~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~  230 (327)
T 1qor_A          156 IACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYRE---EDLVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQ  230 (327)
T ss_dssp             HHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT---SCHHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEE
T ss_pred             HHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC---ccHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhc
Confidence            99999999999 9999999999999999999999998877   6788888888877789999999994 48899999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhc-CcEEEEeeccCCC-----CcCcHHHHHHHHhCCCCCCCCcee--EEeechhH
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACG-GRTLKGTTFGGIK-----TKSDLPTLLDKCKNKEFKLHQLLT--HHVKLEEI  316 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~--~~~~l~~~  316 (335)
                      ++ |+++.+|...+....++...++.+ ++.+.+...+.+.     ..+.+++++++++++++++  .++  ++|+|+++
T Consensus       231 ~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~l~~~  307 (327)
T 1qor_A          231 RR-GLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKV--DVAEQQKYPLKDA  307 (327)
T ss_dssp             EE-EEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCC--CCCGGGEEEGGGH
T ss_pred             CC-CEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCccc--ccccCcEEcHHHH
Confidence            97 999999986543345666667667 7887765432211     1235788999999999765  477  89999999


Q ss_pred             HHHHHHhcCCCe-eeEEEeC
Q 019822          317 DKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       317 ~ea~~~~~~~~~-~k~vi~~  335 (335)
                      ++||+.+.+++. .|+++++
T Consensus       308 ~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          308 QRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHHHhCCCCceEEEeC
Confidence            999999988765 4998864

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=2.4e-40  Score=305.66  Aligned_cols=273  Identities=20%  Similarity=0.222  Sum_probs=221.7

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|++|++||+|+..+.                              
T Consensus        70 D~~~~~G~~~~~~~~P~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~------------------------------  117 (357)
T 1zsy_A           70 DINMIQGNYGLLPELPAVGG-NEG-VAQVVAVGSNVTGLKPGDWVIPANA------------------------------  117 (357)
T ss_dssp             HHHHHHTCSSCCCCSSEECC-SCC-EEEEEEECTTCCSCCTTCEEEESSS------------------------------
T ss_pred             HhhHhcCCCCCCCCCCcccc-ceE-EEEEEEeCCCCCCCCCCCEEEEcCC------------------------------
Confidence            55566677664 35799999 999 9999999999999999999975421                              


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG  163 (335)
                                      +.|+|+||+.+|++.++++|+++++++||+++++++|||+++.+.++++++++|||+|+ |++|
T Consensus       118 ----------------~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG  181 (357)
T 1zsy_A          118 ----------------GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVG  181 (357)
T ss_dssp             ----------------CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHH
T ss_pred             ----------------CCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHH
Confidence                            01489999999999999999999999999999889999999988889999999999997 9999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCCh----hhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCC-CccEEEEcCCChHHHHH
Q 019822          164 LGAVDGARMHGAAKIIGIDKNP----WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM-GVDYCFECTGVPSLLSE  238 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~----~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~-g~d~vid~~g~~~~~~~  238 (335)
                      ++++|+||.+|+ ++++++++.    +++++++++|+++++++++   . ..+.+++.+.+. ++|+||||+|++ ....
T Consensus       182 ~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~---~-~~~~~~~~~~~~~~~Dvvid~~g~~-~~~~  255 (357)
T 1zsy_A          182 QAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAEHVITEEE---L-RRPEMKNFFKDMPQPRLALNCVGGK-SSTE  255 (357)
T ss_dssp             HHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHHHTTCSEEEEHHH---H-HSGGGGGTTSSSCCCSEEEESSCHH-HHHH
T ss_pred             HHHHHHHHHcCC-EEEEEecCccchHHHHHHHHhcCCcEEEecCc---c-hHHHHHHHHhCCCCceEEEECCCcH-HHHH
Confidence            999999999999 777666443    3567889999999997653   1 223455665543 599999999987 4467


Q ss_pred             HHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCC-------CcCcHHHHHHHHhCCCCCCCCceeEEe
Q 019822          239 ALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK-------TKSDLPTLLDKCKNKEFKLHQLLTHHV  311 (335)
Q Consensus       239 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~  311 (335)
                      ++++++++ |+++.+|...+....++...+..+++++.++....+.       ..+.++.+++++++|++++.  +.++|
T Consensus       256 ~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~  332 (357)
T 1zsy_A          256 LLRQLARG-GTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP--ACSQV  332 (357)
T ss_dssp             HHTTSCTT-CEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC--CEEEE
T ss_pred             HHHhhCCC-CEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCc--cceEE
Confidence            89999997 9999998654445566767777899999998654221       12346889999999998765  45899


Q ss_pred             echhHHHHHHHhcCCCe-eeEEEeC
Q 019822          312 KLEEIDKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       312 ~l~~~~ea~~~~~~~~~-~k~vi~~  335 (335)
                      ||+++++||+.+.+++. .|+|+++
T Consensus       333 ~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          333 PLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             EGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             cHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            99999999999988775 4999875

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.6e-40  Score=305.85  Aligned_cols=270  Identities=22%  Similarity=0.295  Sum_probs=220.1

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|++|++||+|+..                             ..+
T Consensus        46 D~~~~~g~~~~~~~~p~v~G-~e~-~G~V~~vG~~v~~~~~GdrV~~~-----------------------------~~~   94 (349)
T 4a27_A           46 DLMVRQGNIDNPPKTPLVPG-FEC-SGIVEALGDSVKGYEIGDRVMAF-----------------------------VNY   94 (349)
T ss_dssp             HHHHHHTCSSSCCCSSBCCC-SEE-EEEEEEECTTCCSCCTTCEEEEE-----------------------------CSS
T ss_pred             HHHHhCCCcCCCCCCCcccc-cee-EEEEEEeCCCCCCCCCCCEEEEe-----------------------------cCC
Confidence            55666787764 57899999 999 99999999999999999999643                             222


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG  163 (335)
                                        |+|+||+.+|++.++++|+++++++||+++++++|||+++.+.++++++++|||+|+ |++|
T Consensus        95 ------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG  156 (349)
T 4a27_A           95 ------------------NAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVG  156 (349)
T ss_dssp             ------------------CCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHH
T ss_pred             ------------------CcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHH
Confidence                              389999999999999999999999999999999999999988899999999999998 9999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+.+|..+|++++ ++++.+.++ +|++++++ ++   .++.+.+++++++ ++|+||||+|++ .+..+++++
T Consensus       157 ~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~---~~~~~~~~~~~~~-g~Dvv~d~~g~~-~~~~~~~~l  228 (349)
T 4a27_A          157 QAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RN---ADYVQEVKRISAE-GVDIVLDCLCGD-NTGKGLSLL  228 (349)
T ss_dssp             HHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TT---SCHHHHHHHHCTT-CEEEEEEECC--------CTTE
T ss_pred             HHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CC---ccHHHHHHHhcCC-CceEEEECCCch-hHHHHHHHh
Confidence            9999999999654999998 678888888 99999998 55   6788999988755 999999999987 558999999


Q ss_pred             ccCCeEEEEEccCCC---c-------------cccchhHHHhhcCcEEEEeeccCCC--------CcCcHHHHHHHHhCC
Q 019822          244 KVGKGKVIVIGVGVD---A-------------MVPLNVIALACGGRTLKGTTFGGIK--------TKSDLPTLLDKCKNK  299 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~---~-------------~~~~~~~~~~~~~~~~~g~~~~~~~--------~~~~~~~~~~~i~~~  299 (335)
                      +++ |+++.+|....   .             ..+++...++.++.++.++....+.        ..++++.+++++++|
T Consensus       229 ~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  307 (349)
T 4a27_A          229 KPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQK  307 (349)
T ss_dssp             EEE-EEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTT
T ss_pred             hcC-CEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCC
Confidence            998 99999997542   1             1235556677789999998754321        145688999999999


Q ss_pred             CCCCCCceeEEeechhHHHHHHHhcCCCee-eEEEeC
Q 019822          300 EFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       300 ~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi~~  335 (335)
                      +++  ++++++|+|+++++||+.+.+++.. |+|+++
T Consensus       308 ~l~--~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~  342 (349)
T 4a27_A          308 KIK--PVVDSLWALEEVKEAMQRIHDRGNIGKLILDV  342 (349)
T ss_dssp             SCC--CCEEEEECGGGHHHHHHHHHTTCCSSEEEEET
T ss_pred             Ccc--ccccceECHHHHHHHHHHHHhCCCCceEEEec
Confidence            975  4588999999999999999887765 999874

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=3.3e-40  Score=305.52  Aligned_cols=279  Identities=15%  Similarity=0.104  Sum_probs=225.5

Q ss_pred             EEeEeecCCCC-CCcc---------ccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcc
Q 019822            6 TLISFALKDSQ-RLFI---------LVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYP   75 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p---------~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~   75 (335)
                      |++.+.|.++. ..+|         .++| ||+ +|+|+++|++|++|++||+|++.+.                     
T Consensus        49 D~~~~~g~~~~~~~~P~~~~~~~p~~i~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~---------------------  105 (364)
T 1gu7_A           49 DINQIQGVYPSKPAKTTGFGTTEPAAPCG-NEG-LFEVIKVGSNVSSLEAGDWVIPSHV---------------------  105 (364)
T ss_dssp             HHHHHHTCSSCCCCCBSTTCCSSCBEECC-SCC-EEEEEEECTTCCSCCTTCEEEESSS---------------------
T ss_pred             HHHHhcCCCCCCCCCCccccccCcccccC-cee-EEEEEEeCCCCCcCCCCCEEEecCC---------------------
Confidence            45556676654 3467         8999 999 9999999999999999999975421                     


Q ss_pred             ccccccccCCCccccccCceeecccccccceeeEEecccceEEcCC-----------CCCcccccccccchhhhhHHHHH
Q 019822           76 IALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDP-----------SIDPSDASFLSCGFTTGYGAAWK  144 (335)
Q Consensus        76 ~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~-----------~~~~~~aa~l~~~~~ta~~~l~~  144 (335)
                             .                  .|+|+||+.+|++.++++|+           ++++++||+++++++|||+++.+
T Consensus       106 -------~------------------~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~  160 (364)
T 1gu7_A          106 -------N------------------FGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTH  160 (364)
T ss_dssp             -------C------------------CCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHS
T ss_pred             -------C------------------CCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHH
Confidence                   1                  13899999999999999998           89999999999999999999877


Q ss_pred             hcCCCCC-CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh----HHHHHhcCCceEeCCCCCCchhHHHHHHhhh
Q 019822          145 EAKVEKG-SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK----KEKGKAFGMTDFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       145 ~~~~~~~-~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~----~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      .++++++ ++|||+|+ |++|++++|+|+.+|+ +|+++++++++    .++++++|+++++++++....++.+.+++++
T Consensus       161 ~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t  239 (364)
T 1gu7_A          161 YVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWI  239 (364)
T ss_dssp             SSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHH
T ss_pred             hhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHh
Confidence            6789999 99999997 9999999999999999 88888766654    6778999999999875200035778888887


Q ss_pred             --CCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC------cCcHH
Q 019822          219 --HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT------KSDLP  290 (335)
Q Consensus       219 --~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~  290 (335)
                        ++.++|+||||+|++.. ..++++++++ |+++.+|.......+++...++.+++++.++....+..      .++++
T Consensus       240 ~~~~~g~Dvvid~~G~~~~-~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  317 (364)
T 1gu7_A          240 KQSGGEAKLALNCVGGKSS-TGIARKLNNN-GLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLN  317 (364)
T ss_dssp             HHHTCCEEEEEESSCHHHH-HHHHHTSCTT-CEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHH
T ss_pred             hccCCCceEEEECCCchhH-HHHHHHhccC-CEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHH
Confidence              56699999999998854 5889999997 99999997654345667677778999999976533210      24688


Q ss_pred             HHHHHHhCCCCCCCCceeEEe-echhHHHHHHHhcCCCe-eeEEEeC
Q 019822          291 TLLDKCKNKEFKLHQLLTHHV-KLEEIDKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       291 ~~~~~i~~~~~~~~~~~~~~~-~l~~~~ea~~~~~~~~~-~k~vi~~  335 (335)
                      ++++++++|++++....+..+ +++++++||+.+.+++. .|+|+++
T Consensus       318 ~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          318 QIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            899999999998875544334 34599999999887754 4999875

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=6.5e-40  Score=301.07  Aligned_cols=269  Identities=20%  Similarity=0.221  Sum_probs=225.4

Q ss_pred             EEeEeecCCCC--CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-
Q 019822            6 TLISFALKDSQ--RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-   82 (335)
Q Consensus         6 d~~~~~g~~~~--~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-   82 (335)
                      |++.+.|.++.  ..+|.++| ||+ +|+|+++|++|++|++||+|+....                         |.. 
T Consensus        48 D~~~~~g~~~~~~~~~P~v~G-~E~-~G~V~~vG~~v~~~~vGdrV~~~~~-------------------------g~~~  100 (343)
T 3gaz_A           48 DAKIRAGEAPHAQQPLPAILG-MDL-AGTVVAVGPEVDSFRVGDAVFGLTG-------------------------GVGG  100 (343)
T ss_dssp             HHHHHTTCCGGGCCCSSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEEECC-------------------------SSTT
T ss_pred             hHHHhCCCCCCCCCCCCcccC-cce-EEEEEEECCCCCCCCCCCEEEEEeC-------------------------CCCC
Confidence            44555665432  46899999 999 9999999999999999999975321                         111 


Q ss_pred             cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CH
Q 019822           83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GT  161 (335)
Q Consensus        83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~  161 (335)
                      .+                  |+|+||+.+|++.++++|+++++++||++++++.|||+++.++++++++++|||+|+ |+
T Consensus       101 ~~------------------G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~  162 (343)
T 3gaz_A          101 LQ------------------GTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGG  162 (343)
T ss_dssp             CC------------------CSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSH
T ss_pred             CC------------------cceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCH
Confidence            12                  489999999999999999999999999999999999999888899999999999995 99


Q ss_pred             HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHH
Q 019822          162 VGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE  241 (335)
Q Consensus       162 vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~  241 (335)
                      +|++++|+|+..|+ +|+++ .+++++++++++|++. ++ ++   .++.+.+++.++++++|++|||+|++ .+..+++
T Consensus       163 iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~-~~---~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~  234 (343)
T 3gaz_A          163 VGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-ID-AS---REPEDYAAEHTAGQGFDLVYDTLGGP-VLDASFS  234 (343)
T ss_dssp             HHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-EE-TT---SCHHHHHHHHHTTSCEEEEEESSCTH-HHHHHHH
T ss_pred             HHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-ec-cC---CCHHHHHHHHhcCCCceEEEECCCcH-HHHHHHH
Confidence            99999999999999 99999 7899999999999988 66 54   67888999999888999999999986 7899999


Q ss_pred             hhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC--------CCcCcHHHHHHHHhCCCCCCCCcee-EEee
Q 019822          242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI--------KTKSDLPTLLDKCKNKEFKLHQLLT-HHVK  312 (335)
Q Consensus       242 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~  312 (335)
                      +++++ |+++.++...    .++...+..+++++.++.....        ...++++++++++++|++++  .++ ++||
T Consensus       235 ~l~~~-G~iv~~g~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~  307 (343)
T 3gaz_A          235 AVKRF-GHVVSCLGWG----THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAP--RLDPRTFS  307 (343)
T ss_dssp             HEEEE-EEEEESCCCS----CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCC--CBCSCCEE
T ss_pred             HHhcC-CeEEEEcccC----ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCccc--CccCcEec
Confidence            99997 9999998764    3345566679999998753211        01256888999999999764  467 6999


Q ss_pred             chhHHHHHHHhcCCCe-----eeEEEe
Q 019822          313 LEEIDKAIQLLKQPDC-----VKVLIT  334 (335)
Q Consensus       313 l~~~~ea~~~~~~~~~-----~k~vi~  334 (335)
                      |+++++||+.+.+++.     +|++++
T Consensus       308 l~~~~~A~~~~~~~~~~Gr~~GK~v~~  334 (343)
T 3gaz_A          308 IAEIGSAYDAVLGRNDVPRQRGKIAIT  334 (343)
T ss_dssp             TTCHHHHHHHHHTCTTCCCCSSBCEEE
T ss_pred             HHHHHHHHHHHHcCCCcccccceEEEE
Confidence            9999999999988753     388875

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=5.8e-41  Score=305.78  Aligned_cols=272  Identities=15%  Similarity=0.172  Sum_probs=225.4

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|  +++|++||+|++.+   |.                    +|...+
T Consensus        43 D~~~~~g~~~~~~~~p~v~G-~E~-~G~V~~~G--v~~~~vGdrV~~~~---~~--------------------~g~~~~   95 (324)
T 3nx4_A           43 DALAITGKGKIIRHFPMIPG-IDF-AGTVHASE--DPRFHAGQEVLLTG---WG--------------------VGENHW   95 (324)
T ss_dssp             HHHHHHTCTTCCCSSSBCCC-SEE-EEEEEEES--STTCCTTCEEEEEC---TT--------------------BTTTBC
T ss_pred             HHhhhcCCCCCCCCCCcccc-cee-EEEEEEeC--CCCCCCCCEEEEcc---cc--------------------cCCCCC
Confidence            55666777765 57899999 999 99999999  57899999998753   11                    243344


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHH--HhcCCCCCC-EEEEEcC-C
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW--KEAKVEKGS-SVAVLGL-G  160 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~~~~-~VlI~G~-g  160 (335)
                      |                  +|+||+.+|++.++++|+++++++||++++.+.|||+++.  .+.++++++ +|||+|+ |
T Consensus        96 G------------------~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G  157 (324)
T 3nx4_A           96 G------------------GLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASG  157 (324)
T ss_dssp             C------------------SSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTS
T ss_pred             C------------------ceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCc
Confidence            4                  9999999999999999999999999999999999999885  445566633 4999997 9


Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      ++|++++|+|+.+|+ +|++++++++++++++++|+++++|+++   .+.   +++++++ ++|++|||+|++ .++.++
T Consensus       158 ~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~~~---~~~~~~~-~~d~v~d~~g~~-~~~~~~  228 (324)
T 3nx4_A          158 GVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDE---FAE---SRPLEKQ-LWAGAIDTVGDK-VLAKVL  228 (324)
T ss_dssp             HHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGG---SSC---CCSSCCC-CEEEEEESSCHH-HHHHHH
T ss_pred             HHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCC---HHH---HHhhcCC-CccEEEECCCcH-HHHHHH
Confidence            999999999999999 9999999999999999999999998876   332   5555555 899999999987 889999


Q ss_pred             HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      ++++++ |+++.+|.......+++...++.+++++.++.......   .+.++.+++++++|++++  + +++|+|++++
T Consensus       229 ~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~  304 (324)
T 3nx4_A          229 AQMNYG-GCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQ--A-ATEITLADAP  304 (324)
T ss_dssp             HTEEEE-EEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHH--H-EEEEEGGGHH
T ss_pred             HHHhcC-CEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCC--C-ceeEeHHHHH
Confidence            999998 99999998765445667777878999999986443211   245778889999998654  3 7899999999


Q ss_pred             HHHHHhcCCCee-eEEEeC
Q 019822          318 KAIQLLKQPDCV-KVLITI  335 (335)
Q Consensus       318 ea~~~~~~~~~~-k~vi~~  335 (335)
                      +||+.+.+++.. |+|+++
T Consensus       305 ~A~~~~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          305 KFADAIINNQVQGRTLVKI  323 (324)
T ss_dssp             HHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHhCCCCceEEEec
Confidence            999999988765 999875

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2.8e-41  Score=306.69  Aligned_cols=259  Identities=13%  Similarity=0.130  Sum_probs=202.9

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.+.|.++...+|.++| ||+ +|+|+++|++|++|++||+|+..+                          +...+ 
T Consensus        45 D~~~~~g~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~vGdrV~~~~--------------------------~~~~~-   95 (315)
T 3goh_A           45 DWKFIKANPINWSNGHVPG-VDG-AGVIVKVGAKVDSKMLGRRVAYHT--------------------------SLKRH-   95 (315)
T ss_dssp             HHHHHHHCTTCCCTTCCCC-SEE-EEEEEEECTTSCGGGTTCEEEEEC--------------------------CTTSC-
T ss_pred             HHHHHcCCCCcCCCCCEee-eee-EEEEEEeCCCCCCCCCCCEEEEeC--------------------------CCCCC-
Confidence            5556677777667899999 999 999999999999999999998653                          22223 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLG  165 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~  165 (335)
                                       |+|+||+.+|++.++++|+++++++||+++++++|||+++ +.++++++++|||+|+|++|++
T Consensus        96 -----------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~  157 (315)
T 3goh_A           96 -----------------GSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNL  157 (315)
T ss_dssp             -----------------CSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHH
T ss_pred             -----------------cccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHH
Confidence                             3899999999999999999999999999999999999999 8899999999999999999999


Q ss_pred             HHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhcc
Q 019822          166 AVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       166 ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~  245 (335)
                      ++|+|+.+|+ +|++++ +++++++++++|++++++  +         .+++  ++++|+||||+|++ .+..+++++++
T Consensus       158 a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~--d---------~~~v--~~g~Dvv~d~~g~~-~~~~~~~~l~~  221 (315)
T 3goh_A          158 LTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR--E---------PSQV--TQKYFAIFDAVNSQ-NAAALVPSLKA  221 (315)
T ss_dssp             HHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES--S---------GGGC--CSCEEEEECC--------TTGGGEEE
T ss_pred             HHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc--C---------HHHh--CCCccEEEECCCch-hHHHHHHHhcC
Confidence            9999999999 999999 999999999999999883  1         1122  55999999999987 45889999999


Q ss_pred             CCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC---CC-------cCcHHHHHHHHhCCCCCCCCceeEEeechh
Q 019822          246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI---KT-------KSDLPTLLDKCKNKEFKLHQLLTHHVKLEE  315 (335)
Q Consensus       246 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~  315 (335)
                      + |+++.++.... ...+   ....+++.+....+...   ..       .+.++.+++++++|+++  ++++++|||++
T Consensus       222 ~-G~~v~~g~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~  294 (315)
T 3goh_A          222 N-GHIICIQDRIP-APID---PAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKME--IAAPDIFRFEQ  294 (315)
T ss_dssp             E-EEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSC--CCCCEEEEGGG
T ss_pred             C-CEEEEEeCCCC-cccc---chhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcc--cccceEecHHH
Confidence            7 99999975432 1111   12224555554443221   01       12467899999999975  45889999999


Q ss_pred             HHHHHHHhcCCCeeeEEEeC
Q 019822          316 IDKAIQLLKQPDCVKVLITI  335 (335)
Q Consensus       316 ~~ea~~~~~~~~~~k~vi~~  335 (335)
                      +++||+.+. ....|+++++
T Consensus       295 ~~~A~~~~~-~~~gKvvi~~  313 (315)
T 3goh_A          295 MIEALDHSE-QTKLKTVLTL  313 (315)
T ss_dssp             HHHHHHHHH-HHCCCEEEES
T ss_pred             HHHHHHHHH-hcCCcEEEEe
Confidence            999999998 4456999874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.8e-39  Score=295.51  Aligned_cols=253  Identities=17%  Similarity=0.159  Sum_probs=212.9

Q ss_pred             CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822           17 RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL   96 (335)
Q Consensus        17 ~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~   96 (335)
                      ..+|.++| ||+ +|+|+++|++|++|++||+|+..+...                         ..+            
T Consensus        65 ~~~p~v~G-~E~-~G~V~~vG~~v~~~~~GdrV~~~~~~~-------------------------~~~------------  105 (321)
T 3tqh_A           65 NNLPSGLG-YDF-SGEVIELGSDVNNVNIGDKVMGIAGFP-------------------------DHP------------  105 (321)
T ss_dssp             TSCSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEEECSTT-------------------------TCC------------
T ss_pred             CCCCCccc-cee-EEEEEEeCCCCCCCCCCCEEEEccCCC-------------------------CCC------------
Confidence            46899999 999 999999999999999999998653211                         112            


Q ss_pred             ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc-CCHHHHHHHHHHHHcCC
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG-LGTVGLGAVDGARMHGA  175 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G-~g~vG~~ai~la~~~G~  175 (335)
                            |+|+||+.++++.++++|+++++++||++++++.|||+++ +.++++++++|||+| +|++|++++|+|+.+|+
T Consensus       106 ------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga  178 (321)
T 3tqh_A          106 ------CCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT  178 (321)
T ss_dssp             ------CCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC
T ss_pred             ------CcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC
Confidence                  3899999999999999999999999999999999999998 889999999999997 59999999999999999


Q ss_pred             CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchh-HHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822          176 AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS-ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       176 ~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~-~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                       +|++++ +++++++++++|+++++++++   .+ +.+.+      +++|+||||+|++. +..++++++++ |+++.++
T Consensus       179 -~vi~~~-~~~~~~~~~~lGa~~~i~~~~---~~~~~~~~------~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g  245 (321)
T 3tqh_A          179 -TVITTA-SKRNHAFLKALGAEQCINYHE---EDFLLAIS------TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVP  245 (321)
T ss_dssp             -EEEEEE-CHHHHHHHHHHTCSEEEETTT---SCHHHHCC------SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECC
T ss_pred             -EEEEEe-ccchHHHHHHcCCCEEEeCCC---cchhhhhc------cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeC
Confidence             999998 567789999999999999887   55 43332      37999999999884 59999999997 9999998


Q ss_pred             cCCCccccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCCCee-eEEE
Q 019822          255 VGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-KVLI  333 (335)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k~vi  333 (335)
                      .... .  .....+..+++++.++...  ...++++.++++++++++++  .++++|||+++++||+.+.+++.. |+|+
T Consensus       246 ~~~~-~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvl  318 (321)
T 3tqh_A          246 TITA-G--RVIEVAKQKHRRAFGLLKQ--FNIEELHYLGKLVSEDKLRI--EISRIFQLSEAVTAHELLETGHVRGKLVF  318 (321)
T ss_dssp             STTH-H--HHHHHHHHTTCEEECCCCC--CCHHHHHHHHHHHHTTSSCC--CEEEEECGGGHHHHHHHHHTTCCCSEEEE
T ss_pred             CCCc-h--hhhhhhhhcceEEEEEecC--CCHHHHHHHHHHHHCCCccc--ccccEEcHHHHHHHHHHHHcCCCCceEEE
Confidence            6543 1  1122355688888875321  23467999999999999776  488999999999999999988765 9998


Q ss_pred             eC
Q 019822          334 TI  335 (335)
Q Consensus       334 ~~  335 (335)
                      ++
T Consensus       319 ~~  320 (321)
T 3tqh_A          319 KV  320 (321)
T ss_dssp             EC
T ss_pred             Ee
Confidence            75

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=1.5e-38  Score=293.95  Aligned_cols=270  Identities=19%  Similarity=0.171  Sum_probs=224.0

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCC-cccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVK-EVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|++|+ .|++||+|++..                              
T Consensus        69 D~~~~~G~~~~~~~~P~i~G-~E~-~G~V~~vG~~V~~~~~vGdrV~~~~------------------------------  116 (362)
T 2c0c_A           69 DINYSAGRYDPSVKPPFDIG-FEG-IGEVVALGLSASARYTVGQAVAYMA------------------------------  116 (362)
T ss_dssp             HHHHHTTTTCTTCCSCEECC-SEE-EEEEEEECTTGGGTCCTTCEEEEEC------------------------------
T ss_pred             HHHHhcCCCCCCCCCCCCCC-cee-EEEEEEECCCccCCCCCCCEEEEcc------------------------------
Confidence            45556677653 46899999 999 999999999999 999999997531                              


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHH
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTV  162 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~v  162 (335)
                      +                  |+|+||+.+|++.++++|+. + .++|+++++++|||+++.+.++++++++|||+|+ |++
T Consensus       117 ~------------------G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~i  176 (362)
T 2c0c_A          117 P------------------GSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGT  176 (362)
T ss_dssp             S------------------CCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTT
T ss_pred             C------------------CcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHH
Confidence            1                  38999999999999999996 3 4567788899999999988889999999999995 999


Q ss_pred             HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHh
Q 019822          163 GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET  242 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~  242 (335)
                      |++++|+|+..|+ +|+++++++++++.++++|++.++++++   .++.+.+++.++ .++|++|||+|+. .++.++++
T Consensus       177 G~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~---~~~~~~~~~~~~-~g~D~vid~~g~~-~~~~~~~~  250 (362)
T 2c0c_A          177 GQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKT---EPVGTVLKQEYP-EGVDVVYESVGGA-MFDLAVDA  250 (362)
T ss_dssp             HHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT---SCHHHHHHHHCT-TCEEEEEECSCTH-HHHHHHHH
T ss_pred             HHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCC---hhHHHHHHHhcC-CCCCEEEECCCHH-HHHHHHHH
Confidence            9999999999999 9999999999999999999999999887   678888887764 4899999999985 78999999


Q ss_pred             hccCCeEEEEEccCCCcc--c--------cchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCc----
Q 019822          243 TKVGKGKVIVIGVGVDAM--V--------PLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQL----  306 (335)
Q Consensus       243 l~~~~G~~v~~g~~~~~~--~--------~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~----  306 (335)
                      ++++ |+++.+|......  .        .++ ..++.+++++.|+....+.  ..++++++++++++|++++...    
T Consensus       251 l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  328 (362)
T 2c0c_A          251 LATK-GRLIVIGFISGYQTPTGLSPVKAGTLP-AKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDL  328 (362)
T ss_dssp             EEEE-EEEEECCCGGGTTSSSCCCCCCCTTHH-HHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTT
T ss_pred             HhcC-CEEEEEeCCCCcCcccccccccccccH-HHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccc
Confidence            9997 9999998764311  1        222 4566799999998654331  1346889999999999886533    


Q ss_pred             --eeEEeechhHHHHHHHhcCCCe-eeEEEeC
Q 019822          307 --LTHHVKLEEIDKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       307 --~~~~~~l~~~~ea~~~~~~~~~-~k~vi~~  335 (335)
                        +++.++|+++++||+.+.+++. .|+++++
T Consensus       329 ~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          329 SPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             STTCSCBSTTHHHHHHHHHHTTCCSBEEEEEC
T ss_pred             cccccccCHHHHHHHHHHHHcCCCCceEEEEc
Confidence              3456899999999999988765 4999864

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=4.8e-37  Score=281.29  Aligned_cols=255  Identities=19%  Similarity=0.220  Sum_probs=219.6

Q ss_pred             Cccccccccc----cceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccC
Q 019822           18 LFILVFSGTK----VSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRG   93 (335)
Q Consensus        18 ~~p~v~G~~e----~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~   93 (335)
                      .+|.++| ||    + +|+|++.  ++++|++||||+..                                         
T Consensus        65 ~~p~~~G-~e~g~~~-~G~V~~~--~v~~~~vGdrV~~~-----------------------------------------   99 (336)
T 4b7c_A           65 IPPVGIG-EVMRALG-VGKVLVS--KHPGFQAGDYVNGA-----------------------------------------   99 (336)
T ss_dssp             SCCCCTT-SBCCCEE-EEEEEEE--CSTTCCTTCEEEEE-----------------------------------------
T ss_pred             CCCCCCC-cccCCce-EEEEEec--CCCCCCCCCEEecc-----------------------------------------
Confidence            3577777 77    8 9999994  58899999999642                                         


Q ss_pred             ceeecccccccceeeEEecccceEEcCCCCCcccc--cccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHH
Q 019822           94 QKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDA--SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGA  170 (335)
Q Consensus        94 ~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a--a~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la  170 (335)
                               |+|+||+.+|++.++++|+++++.++  ++++++++|||+++.+.++++++++|||+|+ |++|++++|++
T Consensus       100 ---------G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a  170 (336)
T 4b7c_A          100 ---------LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIA  170 (336)
T ss_dssp             ---------CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHH
T ss_pred             ---------CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence                     38999999999999999999987776  7788999999999989999999999999997 99999999999


Q ss_pred             HHcCCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeE
Q 019822          171 RMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGK  249 (335)
Q Consensus       171 ~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~  249 (335)
                      +..|+ +|+++++++++.+.+ +++|+++++++.+   .++.+.+++.+++ ++|++||++|++ .+..++++++++ |+
T Consensus       171 ~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~-~~d~vi~~~g~~-~~~~~~~~l~~~-G~  243 (336)
T 4b7c_A          171 RLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKN---EDLAAGLKRECPK-GIDVFFDNVGGE-ILDTVLTRIAFK-AR  243 (336)
T ss_dssp             HHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTT---SCHHHHHHHHCTT-CEEEEEESSCHH-HHHHHHTTEEEE-EE
T ss_pred             HHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCC---HHHHHHHHHhcCC-CceEEEECCCcc-hHHHHHHHHhhC-CE
Confidence            99999 999999999999999 8999999999887   7888999988854 999999999986 789999999998 99


Q ss_pred             EEEEccCCC------ccccchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          250 VIVIGVGVD------AMVPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       250 ~v~~g~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      ++.+|....      ...+++...++.+++++.++...++.  ..+.++++++++++|++++..  ...++|+++++||+
T Consensus       244 iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~l~~~~~A~~  321 (336)
T 4b7c_A          244 IVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSRE--DIVEGLETFPETLL  321 (336)
T ss_dssp             EEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCE--EEEECGGGHHHHHH
T ss_pred             EEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccce--eeecCHHHHHHHHH
Confidence            999987652      12356666777899999998765431  125678899999999988774  44589999999999


Q ss_pred             HhcCCCee-eEEEeC
Q 019822          322 LLKQPDCV-KVLITI  335 (335)
Q Consensus       322 ~~~~~~~~-k~vi~~  335 (335)
                      .+.+++.. |+|+++
T Consensus       322 ~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          322 KLFSGENFGKLVLKV  336 (336)
T ss_dssp             HHHTTCCCSEEEEEC
T ss_pred             HHHcCCCCceEEEeC
Confidence            99988765 999975

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=4.8e-39  Score=293.85  Aligned_cols=275  Identities=20%  Similarity=0.218  Sum_probs=216.3

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++|  +++|++||||++.+..                       +|...+
T Consensus        47 D~~~~~g~~~~~~~~p~i~G-~E~-~G~V~~~~--v~~~~vGdrV~~~~~~-----------------------~g~~~~   99 (330)
T 1tt7_A           47 DGLAGKAGGNIVREYPLILG-IDA-AGTVVSSN--DPRFAEGDEVIATSYE-----------------------LGVSRD   99 (330)
T ss_dssp             HHHHTSTTCTTCSSCSEECC-SEE-EEEEEECS--STTCCTTCEEEEESTT-----------------------BTTTBC
T ss_pred             HHhhhcCCCCCcCCCCcccc-ceE-EEEEEEcC--CCCCCCCCEEEEcccc-----------------------cCCCCC
Confidence            55556676554 36899999 999 99999964  5789999999865310                       132233


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHH--HhcCCCCCC-EEEEEcC-C
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW--KEAKVEKGS-SVAVLGL-G  160 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~~~~-~VlI~G~-g  160 (335)
                                        |+|+||+.+|++.++++|+++++++||++++++.|||.++.  ++.++++++ +|||+|+ |
T Consensus       100 ------------------G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G  161 (330)
T 1tt7_A          100 ------------------GGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATG  161 (330)
T ss_dssp             ------------------CSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTS
T ss_pred             ------------------ccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCC
Confidence                              38999999999999999999999999999989999998875  446788886 9999997 9


Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      ++|++++|+|+.+|+ +|++++++++++++++++|+++++++++   .+ .+.++++++ .++|++|||+|++ .+..++
T Consensus       162 ~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~---~~-~~~~~~~~~-~~~d~vid~~g~~-~~~~~~  234 (330)
T 1tt7_A          162 GVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED---VY-DGTLKALSK-QQWQGAVDPVGGK-QLASLL  234 (330)
T ss_dssp             HHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH---HC-SSCCCSSCC-CCEEEEEESCCTH-HHHHHH
T ss_pred             HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ch-HHHHHHhhc-CCccEEEECCcHH-HHHHHH
Confidence            999999999999999 8999999999999999999999987653   21 112334443 3899999999996 889999


Q ss_pred             HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      ++++++ |+++.+|...+...+++...++.+++++.|+.......   .+.++.+++++.+++++  ++++++|||++++
T Consensus       235 ~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~i~~~~~l~~~~  311 (330)
T 1tt7_A          235 SKIQYG-GSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLL--TIVDREVSLEETP  311 (330)
T ss_dssp             TTEEEE-EEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCST--TSEEEEECSTTHH
T ss_pred             HhhcCC-CEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCcc--cccceEEcHHHHH
Confidence            999997 99999998654344556566777999999874322111   12345555666677754  5578999999999


Q ss_pred             HHHHHhcCCCe-eeEEEeC
Q 019822          318 KAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       318 ea~~~~~~~~~-~k~vi~~  335 (335)
                      +||+.+.+++. .|+|+++
T Consensus       312 ~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          312 GALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HHHHHTTTTCCSSEEEECC
T ss_pred             HHHHHHHcCCCCCeEEEeC
Confidence            99999988765 4999864

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.7e-38  Score=288.64  Aligned_cols=273  Identities=18%  Similarity=0.209  Sum_probs=210.8

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+++  ++++|++||+|++.+..                       +|...+
T Consensus        46 D~~~~~g~~~~~~~~p~v~G-~E~-~G~V~~~--~v~~~~vGdrV~~~~~~-----------------------~g~~~~   98 (328)
T 1xa0_A           46 DGLASIPDGKIVKTYPFVPG-IDL-AGVVVSS--QHPRFREGDEVIATGYE-----------------------IGVTHF   98 (328)
T ss_dssp             HHHHTSGGGSSCCSSSBCCC-SEE-EEEEEEC--CSSSCCTTCEEEEESTT-----------------------BTTTBC
T ss_pred             HHHhhcCCCCCCCCCCcccC-cce-EEEEEec--CCCCCCCCCEEEEcccc-----------------------CCCCCC
Confidence            45556666553 35799999 999 9999996  46789999999864310                       132223


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHH--HhcCCCCCC-EEEEEcC-C
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW--KEAKVEKGS-SVAVLGL-G  160 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~~~~-~VlI~G~-g  160 (335)
                                        |+|+||+.+|++.++++|+++++++||++++++.|||.++.  ++.++++++ +|||+|+ |
T Consensus        99 ------------------G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G  160 (328)
T 1xa0_A           99 ------------------GGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATG  160 (328)
T ss_dssp             ------------------CSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTS
T ss_pred             ------------------ccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCC
Confidence                              38999999999999999999999999999989999998875  446788886 9999997 9


Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHH
Q 019822          161 TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL  240 (335)
Q Consensus       161 ~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~  240 (335)
                      ++|++++|+|+.+|+ +|++++++++++++++++|+++++++++   .+ .+.+++++++ ++|++|||+|++ .+..++
T Consensus       161 ~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~-~~~~~~~~~~-~~d~vid~~g~~-~~~~~~  233 (328)
T 1xa0_A          161 GVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLARED---VM-AERIRPLDKQ-RWAAAVDPVGGR-TLATVL  233 (328)
T ss_dssp             HHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC-------------CCSC-CEEEEEECSTTT-THHHHH
T ss_pred             HHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCC---cH-HHHHHHhcCC-cccEEEECCcHH-HHHHHH
Confidence            999999999999999 8999999999999999999999998875   33 3345555544 899999999986 789999


Q ss_pred             HhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHH
Q 019822          241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEID  317 (335)
Q Consensus       241 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~  317 (335)
                      ++++++ |+++.+|...+...+++...++.+++++.|+.......   .+.++.++++++++ ++  + ++++|+|++++
T Consensus       234 ~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~--~-~~~~~~l~~~~  308 (328)
T 1xa0_A          234 SRMRYG-GAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LE--R-IAQEISLAELP  308 (328)
T ss_dssp             HTEEEE-EEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HH--H-HEEEEEGGGHH
T ss_pred             HhhccC-CEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Cc--e-eeeEeCHHHHH
Confidence            999997 99999998654344566666777999999874221111   12344555555555 43  2 36899999999


Q ss_pred             HHHHHhcCCCe-eeEEEeC
Q 019822          318 KAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       318 ea~~~~~~~~~-~k~vi~~  335 (335)
                      +||+.+.+++. .|+++++
T Consensus       309 ~A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          309 QALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             HHHHHHHHTCCCSEEEEEC
T ss_pred             HHHHHHHcCCCCCeEEEEe
Confidence            99999987765 4999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=9.3e-37  Score=283.41  Aligned_cols=259  Identities=19%  Similarity=0.233  Sum_probs=208.9

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|+++|++|++|++||+|++.+.                          ...+             
T Consensus        93 ~~P~v~G-~E~-~G~V~~vG~~V~~~~vGDrV~~~~~--------------------------~~~~-------------  131 (375)
T 2vn8_A           93 EFPLTLG-RDV-SGVVMECGLDVKYFKPGDEVWAAVP--------------------------PWKQ-------------  131 (375)
T ss_dssp             TCSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEEECC--------------------------TTSC-------------
T ss_pred             cCCcccc-eee-eEEEEEeCCCCCCCCCCCEEEEecC--------------------------CCCC-------------
Confidence            3799999 999 9999999999999999999976431                          1112             


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcC----CCCCCEEEEEcC-CHHHHHHHHHHHH
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAK----VEKGSSVAVLGL-GTVGLGAVDGARM  172 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~----~~~~~~VlI~G~-g~vG~~ai~la~~  172 (335)
                           |+|+||+.++++.++++|+++++++||+++++++|||+++.+.++    ++++++|||+|+ |++|++++|+|+.
T Consensus       132 -----G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~  206 (375)
T 2vn8_A          132 -----GTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKA  206 (375)
T ss_dssp             -----CSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHH
T ss_pred             -----ccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHh
Confidence                 389999999999999999999999999999899999999877788    899999999995 9999999999999


Q ss_pred             cCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccCCeEEE
Q 019822          173 HGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVI  251 (335)
Q Consensus       173 ~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v  251 (335)
                      .|+ +|++++ +++++++++++|++.++++++   .++.+.+++.   .++|++|||+|++ ..+..++++++++ |+++
T Consensus       207 ~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~~~~---~~~~~~~~~~---~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv  277 (375)
T 2vn8_A          207 WDA-HVTAVC-SQDASELVRKLGADDVIDYKS---GSVEEQLKSL---KPFDFILDNVGGSTETWAPDFLKKWSG-ATYV  277 (375)
T ss_dssp             TTC-EEEEEE-CGGGHHHHHHTTCSEEEETTS---SCHHHHHHTS---CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEE
T ss_pred             CCC-EEEEEe-ChHHHHHHHHcCCCEEEECCc---hHHHHHHhhc---CCCCEEEECCCChhhhhHHHHHhhcCC-cEEE
Confidence            999 999998 678999999999999999887   6777777653   3899999999987 4568888999997 9999


Q ss_pred             EEccCCCcccc---chh------HHHhh-------cCcEEEEeeccCCCCcCcHHHHHHHHhCCCCCCCCceeEEeechh
Q 019822          252 VIGVGVDAMVP---LNV------IALAC-------GGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFKLHQLLTHHVKLEE  315 (335)
Q Consensus       252 ~~g~~~~~~~~---~~~------~~~~~-------~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~  315 (335)
                      .+|........   +..      ..++.       ++..+.....  ....+.++++++++++|+++  ++++++|||++
T Consensus       278 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~  353 (375)
T 2vn8_A          278 TLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKIR--PVIEQTFPFSK  353 (375)
T ss_dssp             ESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSCC--CCEEEEEEGGG
T ss_pred             EeCCCcccccccccccchhheeehhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCcc--cCcCeEECHHH
Confidence            99875421110   110      11222       3334433211  11234678999999999975  46889999999


Q ss_pred             HHHHHHHhcCCCe-eeEEEeC
Q 019822          316 IDKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       316 ~~ea~~~~~~~~~-~k~vi~~  335 (335)
                      +++||+.+.+++. .|+|+++
T Consensus       354 ~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          354 VPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHHHHHcCCCCCeEEEEe
Confidence            9999999987765 4999874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=5.6e-38  Score=315.44  Aligned_cols=265  Identities=20%  Similarity=0.214  Sum_probs=221.8

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++++.|.+|   .|.++| ||+ +|+|+++|++|++|++||+|+...                              + 
T Consensus       254 D~~~~~G~~~---~~~~lG-~E~-aG~V~~vG~~V~~~~vGDrV~~~~------------------------------~-  297 (795)
T 3slk_A          254 DALIALGMYP---GVASLG-SEG-AGVVVETGPGVTGLAPGDRVMGMI------------------------------P-  297 (795)
T ss_dssp             HHHHTTTCCS---SCCCSC-CCE-EEEEEEECSSCCSSCTTCEEEECC------------------------------S-
T ss_pred             HHHHHcCCCC---CCcccc-cee-EEEEEEeCCCCCcCCCCCEEEEEe------------------------------c-
Confidence            4555666665   356799 999 999999999999999999996431                              1 


Q ss_pred             CccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGL  164 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~  164 (335)
                                       |+|+||+.++++.++++|+++++++||+++++++|||+++++.+++++|++|||+|+ |++|+
T Consensus       298 -----------------G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~  360 (795)
T 3slk_A          298 -----------------KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGM  360 (795)
T ss_dssp             -----------------SCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHH
T ss_pred             -----------------CCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHH
Confidence                             389999999999999999999999999999999999999988899999999999986 99999


Q ss_pred             HHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc
Q 019822          165 GAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK  244 (335)
Q Consensus       165 ~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~  244 (335)
                      +++|+||.+|+ +|+++++++ +.+.++ +|+++++++++   .++.+.+++.++++|+|+|||+++++ .+..++++++
T Consensus       361 ~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~~---~~~~~~i~~~t~g~GvDvVld~~gg~-~~~~~l~~l~  433 (795)
T 3slk_A          361 AAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSRT---CDFEQQFLGATGGRGVDVVLNSLAGE-FADASLRMLP  433 (795)
T ss_dssp             HHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSSS---STHHHHHHHHSCSSCCSEEEECCCTT-TTHHHHTSCT
T ss_pred             HHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecCC---hhHHHHHHHHcCCCCeEEEEECCCcH-HHHHHHHHhc
Confidence            99999999999 999999655 666666 99999999988   88999999999999999999999986 7899999999


Q ss_pred             cCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCC---CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          245 VGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK---TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       245 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      ++ |+++.+|.... ...... ....+++++.+.......   ..+.+.++++++++|++++  +++++||++++++||+
T Consensus       434 ~~-Gr~v~iG~~~~-~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p--~~~~~~~l~~~~eA~~  508 (795)
T 3slk_A          434 RG-GRFLELGKTDV-RDPVEV-ADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEP--LPVTAWDVRQAPEALR  508 (795)
T ss_dssp             TC-EEEEECCSTTC-CCHHHH-HHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCC--CCEEEEEGGGHHHHHH
T ss_pred             CC-CEEEEeccccc-cCcccc-cccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCC--CcceeEcHHHHHHHHH
Confidence            97 99999997653 111111 122367777766542211   1245788999999999765  4778999999999999


Q ss_pred             HhcCCCee-eEEEeC
Q 019822          322 LLKQPDCV-KVLITI  335 (335)
Q Consensus       322 ~~~~~~~~-k~vi~~  335 (335)
                      .+.+++.. |+|+++
T Consensus       509 ~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          509 HLSQARHVGKLVLTM  523 (795)
T ss_dssp             HHHHTCCCBEEEEEC
T ss_pred             HHhcCCccceEEEec
Confidence            99888765 999874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=3.2e-37  Score=286.72  Aligned_cols=257  Identities=16%  Similarity=0.126  Sum_probs=209.9

Q ss_pred             CccccccccccceEEEEEeCCCC-CcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEV-KEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL   96 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~   96 (335)
                      .+|.++| ||+ +|+|+++|++| ++|++||+|++.+                              +            
T Consensus        89 ~~p~i~G-~e~-~G~V~~vG~~v~~~~~vGdrV~~~~------------------------------~------------  124 (379)
T 3iup_A           89 DASMPVG-NEG-AGVVVEAGSSPAAQALMGKTVAAIG------------------------------G------------  124 (379)
T ss_dssp             TEEEECC-SCE-EEEEEEECSSHHHHTTTTCEEEECC------------------------------S------------
T ss_pred             CCCccce-eee-EEEEEEeCCCcccCCCCCCEEEecC------------------------------C------------
Confidence            5789999 999 99999999999 8899999997532                              1            


Q ss_pred             ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE--cCCHHHHHHHHHHHHcC
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL--GLGTVGLGAVDGARMHG  174 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~--G~g~vG~~ai~la~~~G  174 (335)
                            |+|+||+.+|++.++++|+++++++||++++..+|||+++ +... +++++|||+  |+|++|++++|+|+.+|
T Consensus       125 ------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~G  196 (379)
T 3iup_A          125 ------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICLKDG  196 (379)
T ss_dssp             ------CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHT
T ss_pred             ------CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCC
Confidence                  3899999999999999999999999999999999999765 5555 899999999  45999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhc-----cC---
Q 019822          175 AAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK-----VG---  246 (335)
Q Consensus       175 ~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~-----~~---  246 (335)
                      + +|++++++++++++++++|+++++++++   .++.+.++++++++++|+||||+|++..++.++++++     ++   
T Consensus       197 a-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~---~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~  272 (379)
T 3iup_A          197 I-KLVNIVRKQEQADLLKAQGAVHVCNAAS---PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREY  272 (379)
T ss_dssp             C-CEEEEESSHHHHHHHHHTTCSCEEETTS---TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSC
T ss_pred             C-EEEEEECCHHHHHHHHhCCCcEEEeCCC---hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccce
Confidence            9 8999999999999999999999999988   8899999999988899999999998767788888885     32   


Q ss_pred             -------CeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCCC---CcC----cHHHHHHHHhCCCCCCCCceeEEee
Q 019822          247 -------KGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIK---TKS----DLPTLLDKCKNKEFKLHQLLTHHVK  312 (335)
Q Consensus       247 -------~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~----~~~~~~~~i~~~~~~~~~~~~~~~~  312 (335)
                             +|+++.+|......  ++...++.+++++.|+.++++.   ..+    .++.+++++.+ .  +.++++++||
T Consensus       273 ~~~G~~~~g~iv~~G~~~~~~--~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--l~~~i~~~~~  347 (379)
T 3iup_A          273 SRYGSTTHKQVYLYGGLDTSP--TEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-T--FASHYSKEIS  347 (379)
T ss_dssp             CTTCCCSCEEEEECCCSEEEE--EEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-T--TCCCCSEEEE
T ss_pred             eecccccCceEEEecCCCCCc--cccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-c--CCCcceEEec
Confidence                   15666666543222  2223445588999987765431   112    23555666655 3  4556889999


Q ss_pred             chhH--HHHHHHhcCCCe-eeEEEeC
Q 019822          313 LEEI--DKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       313 l~~~--~ea~~~~~~~~~-~k~vi~~  335 (335)
                      |+++  ++||+.+.+++. .|+||++
T Consensus       348 l~~~~~~~A~~~l~~~~~~gKvVv~~  373 (379)
T 3iup_A          348 LAEVLDLDMIAVYNKRATGEKYLINP  373 (379)
T ss_dssp             HHHHTCHHHHHHHTTCCTTCCEEEET
T ss_pred             HHHhhhHHHHHHHhcCCCCceEEEeC
Confidence            9999  999999988765 4999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=4.6e-36  Score=276.97  Aligned_cols=257  Identities=19%  Similarity=0.213  Sum_probs=216.9

Q ss_pred             CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822           17 RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL   96 (335)
Q Consensus        17 ~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~   96 (335)
                      ..+|.++| ||+ +|+|++  ++|++|++||+|++..                                           
T Consensus        74 ~~~p~v~G-~E~-~G~V~~--~~v~~~~vGdrV~~~~-------------------------------------------  106 (357)
T 2zb4_A           74 WQLSQVVD-GGG-IGIIEE--SKHTNLTKGDFVTSFY-------------------------------------------  106 (357)
T ss_dssp             CCBTSBCE-EEE-EEEEEE--ECSTTCCTTCEEEEEE-------------------------------------------
T ss_pred             CCCCcccc-ccE-EEEEEe--cCCCCCCCCCEEEecC-------------------------------------------
Confidence            35789999 999 999999  8899999999997431                                           


Q ss_pred             ecccccccceeeEEecccceEEcCCCC-----CcccccccccchhhhhHHHHHhcCCCCC--CEEEEEcC-CHHHHHHHH
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSI-----DPSDASFLSCGFTTGYGAAWKEAKVEKG--SSVAVLGL-GTVGLGAVD  168 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~-----~~~~aa~l~~~~~ta~~~l~~~~~~~~~--~~VlI~G~-g~vG~~ai~  168 (335)
                            |+|+||+.++++.++++|+++     +++ +++++++++|||+++++.++++++  ++|||+|+ |++|++++|
T Consensus       107 ------G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~  179 (357)
T 2zb4_A          107 ------WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQ  179 (357)
T ss_dssp             ------EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHH
T ss_pred             ------CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHH
Confidence                  389999999999999999999     555 677888999999999888999999  99999997 999999999


Q ss_pred             HHHHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCC
Q 019822          169 GARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK  247 (335)
Q Consensus       169 la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~  247 (335)
                      +++..|+++|+++++++++++.+++ +|++.++++.+   .++.+.+++.+++ ++|++|||+|+. .+..++++++++ 
T Consensus       180 ~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~---~~~~~~~~~~~~~-~~d~vi~~~G~~-~~~~~~~~l~~~-  253 (357)
T 2zb4_A          180 IGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKK---DNVAEQLRESCPA-GVDVYFDNVGGN-ISDTVISQMNEN-  253 (357)
T ss_dssp             HHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTT---SCHHHHHHHHCTT-CEEEEEESCCHH-HHHHHHHTEEEE-
T ss_pred             HHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCc---hHHHHHHHHhcCC-CCCEEEECCCHH-HHHHHHHHhccC-
Confidence            9999998799999999999999876 99999999887   6788888888877 899999999975 789999999997 


Q ss_pred             eEEEEEccCCCc--cccch-------hHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhH
Q 019822          248 GKVIVIGVGVDA--MVPLN-------VIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEI  316 (335)
Q Consensus       248 G~~v~~g~~~~~--~~~~~-------~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~  316 (335)
                      |+++.+|.....  ..+++       ...++.+++++.++....+.  ..+++.++++++++|++++..  ..+|+|+++
T Consensus       254 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~--~~~~~l~~~  331 (357)
T 2zb4_A          254 SHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKE--TVINGLENM  331 (357)
T ss_dssp             EEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCE--EEEECGGGH
T ss_pred             cEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCcc--ceecCHHHH
Confidence            999999876531  22221       14566789999987653321  135688999999999988763  356999999


Q ss_pred             HHHHHHhcCCCe-eeEEEeC
Q 019822          317 DKAIQLLKQPDC-VKVLITI  335 (335)
Q Consensus       317 ~ea~~~~~~~~~-~k~vi~~  335 (335)
                      ++||+.+.+++. .|+|+++
T Consensus       332 ~~A~~~~~~~~~~gKvvi~~  351 (357)
T 2zb4_A          332 GAAFQSMMTGGNIGKQIVCI  351 (357)
T ss_dssp             HHHHHHHHTTCCSBEEEEEC
T ss_pred             HHHHHHHHcCCCCceEEEEE
Confidence            999999988765 4999864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=6.7e-36  Score=269.67  Aligned_cols=255  Identities=18%  Similarity=0.206  Sum_probs=207.0

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|+           ||+|+..+                             .+
T Consensus        41 D~~~~~g~~~~~~~~p~i~G-~e~-~G~V~-----------GdrV~~~~-----------------------------~~   78 (302)
T 1iz0_A           41 DHLMRLGAYLTRLHPPFIPG-MEV-VGVVE-----------GRRYAALV-----------------------------PQ   78 (302)
T ss_dssp             HHHHHHTCSSSCCCSSBCCC-CEE-EEEET-----------TEEEEEEC-----------------------------SS
T ss_pred             HHHHhCCCCCCCCCCCCccc-ceE-EEEEE-----------CcEEEEec-----------------------------CC
Confidence            45566676664 36899999 999 99998           99997532                             12


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVG  163 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG  163 (335)
                                        |+|+||+.+|++.++++|+++++++||++++++.|||+++.+.. ++++++|||+|+ |++|
T Consensus        79 ------------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG  139 (302)
T 1iz0_A           79 ------------------GGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALG  139 (302)
T ss_dssp             ------------------CCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHH
T ss_pred             ------------------cceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHH
Confidence                              38999999999999999999999999999999999999997777 999999999997 9999


Q ss_pred             HHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhh
Q 019822          164 LGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       164 ~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ++++|+|+.+|+ +|+++++++++++.++++|+++++++++  ..++.+.+      .++|++|| +|++ .++.+++++
T Consensus       140 ~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~--~~~~~~~~------~~~d~vid-~g~~-~~~~~~~~l  208 (302)
T 1iz0_A          140 TAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAE--VPERAKAW------GGLDLVLE-VRGK-EVEESLGLL  208 (302)
T ss_dssp             HHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGG--HHHHHHHT------TSEEEEEE-CSCT-THHHHHTTE
T ss_pred             HHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCc--chhHHHHh------cCceEEEE-CCHH-HHHHHHHhh
Confidence            999999999999 9999999999999999999999887652  01233322      37999999 9985 889999999


Q ss_pred             ccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC-CCcCcHHHHHH---HHhCCCCCCCCceeEEeechhHHHH
Q 019822          244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI-KTKSDLPTLLD---KCKNKEFKLHQLLTHHVKLEEIDKA  319 (335)
Q Consensus       244 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~l~~~~ea  319 (335)
                      +++ |+++.+|.......+++...++.+++++.++..+.+ ...++++++++   ++.+++++  +.++++|||+++++|
T Consensus       209 ~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A  285 (302)
T 1iz0_A          209 AHG-GRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELR--PVVGPVFPFAEAEAA  285 (302)
T ss_dssp             EEE-EEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBC--CCEEEEEEGGGHHHH
T ss_pred             ccC-CEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcc--cccceEEcHHHHHHH
Confidence            997 999999876543234566667779999999875422 12456888999   99999975  458899999999999


Q ss_pred             HHHhcCCCe-eeEEEeC
Q 019822          320 IQLLKQPDC-VKVLITI  335 (335)
Q Consensus       320 ~~~~~~~~~-~k~vi~~  335 (335)
                      |+.+.+++. .|+++++
T Consensus       286 ~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          286 FRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HHHTTCTTCCBEEEEEC
T ss_pred             HHHHHcCCCCceEEEeC
Confidence            999988765 4999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1.6e-34  Score=265.51  Aligned_cols=257  Identities=19%  Similarity=0.226  Sum_probs=213.3

Q ss_pred             CccccccccccceEEEEE--eCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCce
Q 019822           18 LFILVFSGTKVSGKVVES--AGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQK   95 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~   95 (335)
                      .+|.++| ||+ +|+|++  +|+++++|++||+|+..                                           
T Consensus        69 ~~p~v~G-~e~-~G~~~~GvV~~~v~~~~vGdrV~~~-------------------------------------------  103 (345)
T 2j3h_A           69 AQAYTPG-QPI-QGYGVSRIIESGHPDYKKGDLLWGI-------------------------------------------  103 (345)
T ss_dssp             -CCCCTT-SBC-EEEEEEEEEEECSTTCCTTCEEEEE-------------------------------------------
T ss_pred             CCCcCCC-Cee-ecceEEEEEecCCCCCCCCCEEEee-------------------------------------------
Confidence            3688999 999 999999  99999999999999642                                           


Q ss_pred             eecccccccceeeEEecccc--eEEcCC---CCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHH
Q 019822           96 LYHIFSCSTWSEYMVIDANY--VVKVDP---SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDG  169 (335)
Q Consensus        96 ~~~~~~~g~~~~~~~v~~~~--~~~lp~---~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~l  169 (335)
                             |+|+||+.+++..  ++++|+   +++++ +|+++++++|||+++.+.++++++++|||+|+ |++|++++|+
T Consensus       104 -------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~  175 (345)
T 2j3h_A          104 -------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQL  175 (345)
T ss_dssp             -------EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHH
T ss_pred             -------cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHH
Confidence                   3899999998876  999996   35555 67788899999999988889999999999997 9999999999


Q ss_pred             HHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCe
Q 019822          170 ARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKG  248 (335)
Q Consensus       170 a~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G  248 (335)
                      ++..|+ +|+++++++++++.++ ++|+++++|+.+  ..++.+.+++.++ .++|++||++|+. .+..++++++++ |
T Consensus       176 a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~-~~~d~vi~~~g~~-~~~~~~~~l~~~-G  249 (345)
T 2j3h_A          176 AKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--ESDLTAALKRCFP-NGIDIYFENVGGK-MLDAVLVNMNMH-G  249 (345)
T ss_dssp             HHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEETTS--CSCSHHHHHHHCT-TCEEEEEESSCHH-HHHHHHTTEEEE-E
T ss_pred             HHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEecCC--HHHHHHHHHHHhC-CCCcEEEECCCHH-HHHHHHHHHhcC-C
Confidence            999999 9999999999999997 799999988764  1356777777765 4899999999985 889999999997 9


Q ss_pred             EEEEEccCCCc-----cccchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHH
Q 019822          249 KVIVIGVGVDA-----MVPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQ  321 (335)
Q Consensus       249 ~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~  321 (335)
                      +++.+|.....     ...++...++.+++++.|+....+.  ..+.+.++++++++|++++  ++.++++|+++++||+
T Consensus       250 ~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~--~~~~~~~l~~~~~A~~  327 (345)
T 2j3h_A          250 RIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITY--VEDVADGLEKAPEALV  327 (345)
T ss_dssp             EEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCC--CEEEEESGGGSHHHHH
T ss_pred             EEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcC--cccccCCHHHHHHHHH
Confidence            99999875431     2345556677799999987644321  1123788999999999774  4666899999999999


Q ss_pred             HhcCCCee-eEEEeC
Q 019822          322 LLKQPDCV-KVLITI  335 (335)
Q Consensus       322 ~~~~~~~~-k~vi~~  335 (335)
                      .+.+++.. |+|+.+
T Consensus       328 ~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          328 GLFHGKNVGKQVVVV  342 (345)
T ss_dssp             HHHTTCCSSEEEEES
T ss_pred             HHHcCCCceEEEEEe
Confidence            99887754 999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=8e-34  Score=259.54  Aligned_cols=256  Identities=19%  Similarity=0.172  Sum_probs=211.9

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      .+|.++| ||+ +|+|++.  ++++|++||||++.                                             
T Consensus        62 ~~p~~~g-~e~-~G~Vv~~--~v~~~~vGdrV~~~---------------------------------------------   92 (333)
T 1v3u_A           62 KEGAVMM-GQQ-VARVVES--KNSAFPAGSIVLAQ---------------------------------------------   92 (333)
T ss_dssp             CTTSBCC-CCE-EEEEEEE--SCTTSCTTCEEEEC---------------------------------------------
T ss_pred             CCCcccc-cce-EEEEEec--CCCCCCCCCEEEec---------------------------------------------
Confidence            4678899 999 9999995  57889999999642                                             


Q ss_pred             cccccccceeeEEecccceEEcCCC----CCccc-ccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHH
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPS----IDPSD-ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGAR  171 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~----~~~~~-aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~  171 (335)
                           |+|+||+.+|++.++++|++    +++++ +|+++++++|||+++.+.++++++++|||+|+ |++|++++++++
T Consensus        93 -----g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~  167 (333)
T 1v3u_A           93 -----SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAK  167 (333)
T ss_dssp             -----CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHH
T ss_pred             -----CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHH
Confidence                 28999999999999999997    88887 57888899999999988889999999999997 999999999999


Q ss_pred             HcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEE
Q 019822          172 MHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVI  251 (335)
Q Consensus       172 ~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v  251 (335)
                      ..|+ +|+++++++++.+.++++|++.++|..+  ..++.+.+++.+++ ++|++||++|.+ .+..++++++++ |+++
T Consensus       168 ~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~-~~d~vi~~~g~~-~~~~~~~~l~~~-G~~v  241 (333)
T 1v3u_A          168 LKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--VNSLEEALKKASPD-GYDCYFDNVGGE-FLNTVLSQMKDF-GKIA  241 (333)
T ss_dssp             HTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--CSCHHHHHHHHCTT-CEEEEEESSCHH-HHHHHHTTEEEE-EEEE
T ss_pred             HCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCC--HHHHHHHHHHHhCC-CCeEEEECCChH-HHHHHHHHHhcC-CEEE
Confidence            9999 9999999999999999999988888653  14577778777765 899999999986 689999999997 9999


Q ss_pred             EEccCCC-c----cc-cchhHHHhhcCcEEEEeeccCCC---CcCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHH
Q 019822          252 VIGVGVD-A----MV-PLNVIALACGGRTLKGTTFGGIK---TKSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQL  322 (335)
Q Consensus       252 ~~g~~~~-~----~~-~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~  322 (335)
                      .+|.... .    .. ..+...++.+++++.|+....+.   ..+.++++++++++|++++...  ..++|+++++||+.
T Consensus       242 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~l~~~~~A~~~  319 (333)
T 1v3u_A          242 ICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEH--VTKGFENMPAAFIE  319 (333)
T ss_dssp             ECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEE--EEECGGGHHHHHHH
T ss_pred             EEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccc--cccCHHHHHHHHHH
Confidence            9997653 1    11 13555677899999998654431   1345778999999999887644  35799999999999


Q ss_pred             hcCCCe-eeEEEeC
Q 019822          323 LKQPDC-VKVLITI  335 (335)
Q Consensus       323 ~~~~~~-~k~vi~~  335 (335)
                      +.+++. .|+++++
T Consensus       320 ~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          320 MLNGANLGKAVVTA  333 (333)
T ss_dssp             HHTTCCSBEEEEEC
T ss_pred             HHcCCCCceEEEeC
Confidence            988765 4999874

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.96  E-value=7e-30  Score=281.05  Aligned_cols=223  Identities=18%  Similarity=0.196  Sum_probs=186.9

Q ss_pred             cceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 019822          104 TWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID  182 (335)
Q Consensus       104 ~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~  182 (335)
                      +|+||+.+|++.++++|+++++++||+++++++|||+++++.+++++|++|||+|+ |++|++++|+||.+|+ +|++++
T Consensus      1621 ~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~ 1699 (2512)
T 2vz8_A         1621 GLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTV 1699 (2512)
T ss_dssp             CSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             ceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEe
Confidence            89999999999999999999999999999999999999988899999999999986 9999999999999999 999999


Q ss_pred             CChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          183 KNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       183 ~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      +++++++++++    +|+++++++++   .++.+.+++.++++|+|+|||++++. .+..++++++++ |+++.+|....
T Consensus      1700 ~s~~k~~~l~~~~~~lga~~v~~~~~---~~~~~~i~~~t~g~GvDvVld~~g~~-~l~~~l~~L~~~-Gr~V~iG~~~~ 1774 (2512)
T 2vz8_A         1700 GSAEKRAYLQARFPQLDETCFANSRD---TSFEQHVLRHTAGKGVDLVLNSLAEE-KLQASVRCLAQH-GRFLEIGKFDL 1774 (2512)
T ss_dssp             SCHHHHHHHHHHCTTCCSTTEEESSS---SHHHHHHHHTTTSCCEEEEEECCCHH-HHHHHHTTEEEE-EEEEECCCHHH
T ss_pred             CChhhhHHHHhhcCCCCceEEecCCC---HHHHHHHHHhcCCCCceEEEECCCch-HHHHHHHhcCCC-cEEEEeecccc
Confidence            99999999975    78999999987   88999999999988999999999855 789999999997 99999986432


Q ss_pred             -ccccchhHHHhhcCcEEEEeeccCCC--CcCcHHHHHHHH----hCCCCCCCCceeEEeechhHHHHHHHhcCCCee-e
Q 019822          259 -AMVPLNVIALACGGRTLKGTTFGGIK--TKSDLPTLLDKC----KNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCV-K  330 (335)
Q Consensus       259 -~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~i----~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~~~~-k  330 (335)
                       ....+. ..++.+++++.++....+.  ....+..+++++    .+++++  ++++++||++++++|++.+.+++.. |
T Consensus      1775 ~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~--p~i~~~f~l~ei~eA~~~l~~g~~~GK 1851 (2512)
T 2vz8_A         1775 SNNHALG-MAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQ--PLKCTVFPRTKVEAAFRYMAQGKHIGK 1851 (2512)
T ss_dssp             HTTCEEE-GGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSC--CCCEEEEESSTHHHHHHHHHTTCCSSE
T ss_pred             cccCccc-ccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcC--CCcceEecHHHHHHHHHhhhccCccce
Confidence             111122 2344589999987654321  123455555554    456654  4578999999999999999988765 9


Q ss_pred             EEEeC
Q 019822          331 VLITI  335 (335)
Q Consensus       331 ~vi~~  335 (335)
                      +|+.+
T Consensus      1852 vVi~~ 1856 (2512)
T 2vz8_A         1852 VVIQV 1856 (2512)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            98864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.89  E-value=7.6e-23  Score=172.77  Aligned_cols=184  Identities=17%  Similarity=0.276  Sum_probs=140.6

Q ss_pred             cceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 019822          114 NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  192 (335)
Q Consensus       114 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~  192 (335)
                      +.++++|+++++++||++++++.|||+++.+..+++++++|||+|+ |++|++++++++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            4688999999999999999999999999877789999999999995 9999999999999999 9999999999999999


Q ss_pred             hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-ccccchhHHHhhc
Q 019822          193 AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACG  271 (335)
Q Consensus       193 ~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~  271 (335)
                      ++|++.+++..+   .++.+.+.+.+.+.++|++||++|.. .++.++++++++ |+++.+|.... ...+++.. .+.+
T Consensus        81 ~~g~~~~~d~~~---~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRS---VDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPG-GRFIELGKKDVYADASLGLA-ALAK  154 (198)
T ss_dssp             TTCCSEEEETTC---STHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGG-GGTT
T ss_pred             HcCCCEEeeCCc---HHHHHHHHHHhCCCCCeEEEECCchH-HHHHHHHHhccC-CEEEEEcCCCCcCcCcCChh-HhcC
Confidence            999988888876   67778888877666899999999865 789999999997 99999987653 12223332 2357


Q ss_pred             CcEEEEeec------cCCCCcCcHHHHHHHHhCCCCCCC
Q 019822          272 GRTLKGTTF------GGIKTKSDLPTLLDKCKNKEFKLH  304 (335)
Q Consensus       272 ~~~~~g~~~------~~~~~~~~~~~~~~~i~~~~~~~~  304 (335)
                      ++++.+...      +.....+.+.++++++++|++++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            888886532      110113567889999999998775

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.22  E-value=1.3e-11  Score=107.08  Aligned_cols=169  Identities=12%  Similarity=0.003  Sum_probs=109.4

Q ss_pred             cccCCCEEEecc-------cCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeecccccccceeeEEeccc
Q 019822           42 EVKEGDIVIPTY-------IGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN  114 (335)
Q Consensus        42 ~~~~Gd~V~~~~-------~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~  114 (335)
                      .+++||+|++.+       ...|+.|.+|+.|..+.|.....                           .|...+   ..
T Consensus         3 ~~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~---------------------------~~G~~~---~~   52 (248)
T 2yvl_A            3 SFKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK---------------------------PEGVKI---NG   52 (248)
T ss_dssp             CCCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC---------------------------CTTEEE---TT
T ss_pred             cCCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC---------------------------CCCCEE---EE
Confidence            389999999988       66778888888887777764211                           111111   23


Q ss_pred             ceEEcCCCCCcc-----cccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH
Q 019822          115 YVVKVDPSIDPS-----DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE  189 (335)
Q Consensus       115 ~~~~lp~~~~~~-----~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~  189 (335)
                      .+.+.|+.....     ..+.+..+...+  .+.....+.++++||.+|+| .|..++.+++. +. +|++++.+++..+
T Consensus        53 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~  127 (248)
T 2yvl_A           53 FEVYRPTLEEIILLGFERKTQIIYPKDSF--YIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYK  127 (248)
T ss_dssp             EEEECCCHHHHHHHTSCCSSCCCCHHHHH--HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHH
T ss_pred             EEEeCCCHHHHHHhcCcCCCCcccchhHH--HHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHH
Confidence            344444322111     111111122222  24566788899999999998 59999999988 66 9999999999888


Q ss_pred             HHHhc----CC-c--eEeCCCCCCchhHHHHHHhhh-CCCCccEEEEcCCCh-HHHHHHHHhhccCCeEEEEEccC
Q 019822          190 KGKAF----GM-T--DFINPDDEPNKSISELVKGIT-HGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       190 ~~~~l----ga-~--~v~~~~~~~~~~~~~~i~~~~-~g~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .+++.    +. .  .++..+.          .+.. ...++|+|+...+.+ ..++.+.+.|+++ |+++.....
T Consensus       128 ~a~~~~~~~~~~~~~~~~~~d~----------~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  192 (248)
T 2yvl_A          128 TAQKNLKKFNLGKNVKFFNVDF----------KDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLPT  192 (248)
T ss_dssp             HHHHHHHHTTCCTTEEEECSCT----------TTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEESS
T ss_pred             HHHHHHHHcCCCCcEEEEEcCh----------hhcccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence            87553    32 1  1221111          1122 234799999877765 6889999999998 999887653

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.95  E-value=8.6e-12  Score=116.18  Aligned_cols=183  Identities=11%  Similarity=0.125  Sum_probs=127.5

Q ss_pred             ccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeeccc
Q 019822           21 LVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIF  100 (335)
Q Consensus        21 ~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~  100 (335)
                      ...| ++. ++.|.++|+++.++.+|+.++.-...                       .++.               ...
T Consensus        75 ~~~g-~~a-~~~i~~v~~Glds~~vGe~~Il~qvk-----------------------~~~~---------------~~~  114 (404)
T 1gpj_A           75 VKRG-SEA-VRHLFRVASGLESMMVGEQEILRQVK-----------------------KAYD---------------RAA  114 (404)
T ss_dssp             EEEH-HHH-HHHHHHHHTTTTSSSTTCHHHHHHHH-----------------------HHHH---------------HHH
T ss_pred             eecC-chH-hhhheeeccCCCCCcCCcchhHHHHH-----------------------HHHH---------------HHH
Confidence            3467 999 99999999999999999987431100                       0000               000


Q ss_pred             ccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhc---CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 019822          101 SCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA---KVEKGSSVAVLGLGTVGLGAVDGARMHGAAK  177 (335)
Q Consensus       101 ~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~  177 (335)
                      ..|++++|+.++...++++|++++.+.++. ..++.++|.++....   +..++++|+|+|+|.+|.++++.++..|+++
T Consensus       115 ~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~  193 (404)
T 1gpj_A          115 RLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRA  193 (404)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSE
T ss_pred             HcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCE
Confidence            113678888888888999998887776655 347778887663222   2358999999999999999999999999889


Q ss_pred             EEEEcCChhhH-HHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHH--HHHHh--h--ccCCeEE
Q 019822          178 IIGIDKNPWKK-EKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLS--EALET--T--KVGKGKV  250 (335)
Q Consensus       178 V~~~~~~~~~~-~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~--~~~~~--l--~~~~G~~  250 (335)
                      |+++++++++. +.++++|++ +++..     ++.+.+      .++|+|++|++.+..+.  ..++.  +  +++ +.+
T Consensus       194 V~v~~r~~~ra~~la~~~g~~-~~~~~-----~l~~~l------~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~  260 (404)
T 1gpj_A          194 VLVANRTYERAVELARDLGGE-AVRFD-----ELVDHL------ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPI  260 (404)
T ss_dssp             EEEECSSHHHHHHHHHHHTCE-ECCGG-----GHHHHH------HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCE
T ss_pred             EEEEeCCHHHHHHHHHHcCCc-eecHH-----hHHHHh------cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCE
Confidence            99999999886 667888875 33332     232222      16999999998653321  34444  3  444 667


Q ss_pred             EEEccCC
Q 019822          251 IVIGVGV  257 (335)
Q Consensus       251 v~~g~~~  257 (335)
                      +.++...
T Consensus       261 v~vdia~  267 (404)
T 1gpj_A          261 LIIDIAN  267 (404)
T ss_dssp             EEEECCS
T ss_pred             EEEEccC
Confidence            7776654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.79  E-value=1.1e-08  Score=93.79  Aligned_cols=138  Identities=18%  Similarity=0.143  Sum_probs=96.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce--EeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD--FINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      +++|+|+|+|++|++++++++.+|+ +|+++++++++.+.++++++..  +++.+.   .++.+.++      ++|+||+
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~DvVI~  236 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA------EADLLIG  236 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH------TCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH---HHHHHHHc------CCCEEEE
Confidence            4899999999999999999999999 9999999999999988776543  333332   33433332      6999999


Q ss_pred             cCCChHH------HHHHHHhhccCCeEEEEEccCCCc------cccchhHHHhhcCcEEEEeeccCCC---------CcC
Q 019822          229 CTGVPSL------LSEALETTKVGKGKVIVIGVGVDA------MVPLNVIALACGGRTLKGTTFGGIK---------TKS  287 (335)
Q Consensus       229 ~~g~~~~------~~~~~~~l~~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~---------~~~  287 (335)
                      |++.+..      .+..++.++++ |+++.++...+.      ..+++...+..+++++.+...-...         ...
T Consensus       237 ~~~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~  315 (361)
T 1pjc_A          237 AVLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNS  315 (361)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHH
T ss_pred             CCCcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHH
Confidence            9986531      46778889997 999999865432      2344444455577777764311100         012


Q ss_pred             cHHHHHHHHhCC
Q 019822          288 DLPTLLDKCKNK  299 (335)
Q Consensus       288 ~~~~~~~~i~~~  299 (335)
                      .++.+++++.+|
T Consensus       316 ~~~~l~~l~~~G  327 (361)
T 1pjc_A          316 TLPYVVKLANQG  327 (361)
T ss_dssp             HHHHHHHHHHHG
T ss_pred             HHHHHHHHHhCC
Confidence            345677777666

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.71  E-value=2.6e-08  Score=92.04  Aligned_cols=146  Identities=19%  Similarity=0.226  Sum_probs=96.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCC------------Cch----hHHH
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDE------------PNK----SISE  212 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~------------~~~----~~~~  212 (335)
                      ++++|+|+|+|.+|++++++++.+|+ +|+++++++++.+.++++|++.+ ++..+.            .+.    ....
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 89999999999999988998654 222110            000    0122


Q ss_pred             HHHhhhCCCCccEEEEcC---CChH--HH-HHHHHhhccCCeEEEEEccCCCcc--ccchhHHHhhcCcEEEEeeccCCC
Q 019822          213 LVKGITHGMGVDYCFECT---GVPS--LL-SEALETTKVGKGKVIVIGVGVDAM--VPLNVIALACGGRTLKGTTFGGIK  284 (335)
Q Consensus       213 ~i~~~~~g~g~d~vid~~---g~~~--~~-~~~~~~l~~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~  284 (335)
                      .+.+...  ++|+||+|+   |.+.  .+ ...++.++++ ++++.++...+..  .+.+...+..+++++.++..  + 
T Consensus       250 ~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~--~-  323 (384)
T 1l7d_A          250 AVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTN--V-  323 (384)
T ss_dssp             HHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSS--G-
T ss_pred             HHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCC--C-
Confidence            2444443  699999999   5321  22 6788899997 9999998643211  22232234457788887642  1 


Q ss_pred             CcCcHHHHHHHHhCCCCC
Q 019822          285 TKSDLPTLLDKCKNKEFK  302 (335)
Q Consensus       285 ~~~~~~~~~~~i~~~~~~  302 (335)
                      .......+.+++.++.++
T Consensus       324 p~~~~~~a~~l~~~~~~~  341 (384)
T 1l7d_A          324 PSRVAADASPLFAKNLLN  341 (384)
T ss_dssp             GGGGHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHhHHH
Confidence            112245577777766544

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.56  E-value=2.1e-07  Score=85.60  Aligned_cols=119  Identities=19%  Similarity=0.169  Sum_probs=84.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceEeC-CCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFIN-PDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~-~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      ++++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|+....+ ...   .++.+.+    .  ++|+|+
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~---~~l~~~l----~--~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSSA---YELEGAV----K--RADLVI  236 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECCH---HHHHHHH----H--HCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCCH---HHHHHHH----c--CCCEEE
Confidence            57899999999999999999999999 99999999999888866 77653222 221   2333222    2  689999


Q ss_pred             EcCCChHH------HHHHHHhhccCCeEEEEEccCCC------ccccchhHHHhhcCcEEEEee
Q 019822          228 ECTGVPSL------LSEALETTKVGKGKVIVIGVGVD------AMVPLNVIALACGGRTLKGTT  279 (335)
Q Consensus       228 d~~g~~~~------~~~~~~~l~~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~g~~  279 (335)
                      +|++.+..      ....++.++++ ++++.++...+      ++.+++...+..+++.+.++.
T Consensus       237 ~~~~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~p  299 (377)
T 2vhw_A          237 GAVLVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVA  299 (377)
T ss_dssp             ECCCCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBT
T ss_pred             ECCCcCCCCCcceecHHHHhcCCCC-cEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecC
Confidence            99976532      57788899997 99999985432      122333333445677665443

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.52  E-value=3.3e-07  Score=84.94  Aligned_cols=126  Identities=22%  Similarity=0.303  Sum_probs=85.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEe-CCCC--C--------CchhH----HHHH
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDD--E--------PNKSI----SELV  214 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~-~~~~--~--------~~~~~----~~~i  214 (335)
                      ++.+|+|+|+|.+|++++++++.+|+ +|+++++++++.+.++++|++.+. +..+  .        ...++    ...+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            57899999999999999999999999 999999999999999999986542 1100  0        00111    1124


Q ss_pred             HhhhCCCCccEEEEcCCCh-----HHH-HHHHHhhccCCeEEEEEccCCCccccchh--H-HHhhcCcEEEEee
Q 019822          215 KGITHGMGVDYCFECTGVP-----SLL-SEALETTKVGKGKVIVIGVGVDAMVPLNV--I-ALACGGRTLKGTT  279 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~~-----~~~-~~~~~~l~~~~G~~v~~g~~~~~~~~~~~--~-~~~~~~~~~~g~~  279 (335)
                      .+...  ++|+||++++.+     .++ ...++.++++ +.++.++...+..++...  . .+..+++++.+..
T Consensus       250 ~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeC
Confidence            44433  589999995321     223 5788899997 999999864332233221  1 1445788888764

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.52  E-value=4.5e-07  Score=83.22  Aligned_cols=120  Identities=23%  Similarity=0.214  Sum_probs=78.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ++++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|.....+..+  ..++.+.++      ++|+|++
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~~~------~~DvVi~  235 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT--EANIKKSVQ------HADLLIG  235 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC--HHHHHHHHH------HCSEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC--HHHHHHHHh------CCCEEEE
Confidence            46899999999999999999999999 99999999999888765 77653222222  123333322      6899999


Q ss_pred             cCCChHH------HHHHHHhhccCCeEEEEEccCCCc------cccchhHHHhhcCcEEEEee
Q 019822          229 CTGVPSL------LSEALETTKVGKGKVIVIGVGVDA------MVPLNVIALACGGRTLKGTT  279 (335)
Q Consensus       229 ~~g~~~~------~~~~~~~l~~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~g~~  279 (335)
                      |++.+..      .+..++.++++ |+++.++...+.      +.+++...+..+++.+.+..
T Consensus       236 ~~g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~  297 (369)
T 2eez_A          236 AVLVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVA  297 (369)
T ss_dssp             CCC-------CCSCHHHHTTSCTT-CEEEECC-------------------CEETTEEEECCS
T ss_pred             CCCCCccccchhHHHHHHHhhcCC-CEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeC
Confidence            9986531      46788889997 999999865431      22333333445677766643

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.42  E-value=1.2e-06  Score=82.82  Aligned_cols=115  Identities=17%  Similarity=0.243  Sum_probs=87.7

Q ss_pred             hhhhhHHHHHhcC--CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHH
Q 019822          135 FTTGYGAAWKEAK--VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISE  212 (335)
Q Consensus       135 ~~ta~~~l~~~~~--~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~  212 (335)
                      ..++|+++ .+..  ..++++|+|+|.|.+|..+++.++.+|+ +|+++++++.+.+.++++|++ ++   +     +.+
T Consensus       257 ~~s~~~g~-~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~---~-----l~e  325 (494)
T 3ce6_A          257 RHSLIDGI-NRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV---T-----VEE  325 (494)
T ss_dssp             HHHHHHHH-HHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC---C-----HHH
T ss_pred             hhhhhHHH-HhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee---c-----HHH
Confidence            34555654 3333  6789999999999999999999999999 999999999998888889985 32   1     211


Q ss_pred             HHHhhhCCCCccEEEEcCCChHHHH-HHHHhhccCCeEEEEEccCCCccccchhHHHhh
Q 019822          213 LVKGITHGMGVDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVGVDAMVPLNVIALAC  270 (335)
Q Consensus       213 ~i~~~~~g~g~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~  270 (335)
                      .+      +++|+|+++++....+. ..++.++++ ++++.+|...   .+++...+..
T Consensus       326 ~l------~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~---~eId~~aL~~  374 (494)
T 3ce6_A          326 AI------GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD---NEIDMAGLER  374 (494)
T ss_dssp             HG------GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG---GGBCHHHHHH
T ss_pred             HH------hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC---CccCHHHHHH
Confidence            11      26899999999876565 788999997 9999998754   2344445543

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.35  E-value=2.4e-06  Score=75.07  Aligned_cols=103  Identities=21%  Similarity=0.239  Sum_probs=73.4

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCC-ce--EeCCCCCCchhHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGM-TD--FINPDDEPNKSISEL  213 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lga-~~--v~~~~~~~~~~~~~~  213 (335)
                      +.....+.++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .+. ..  ++..+      +.  
T Consensus       104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~~--  174 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD------IS--  174 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC------GG--
T ss_pred             HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC------HH--
Confidence            45667889999999999886 888889998864 3399999999988877754    343 11  22221      11  


Q ss_pred             HHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccCCeEEEEEccC
Q 019822          214 VKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       214 i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                        +......+|+|+.....+ ..+..+.+.|+++ |+++.....
T Consensus       175 --~~~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  215 (277)
T 1o54_A          175 --EGFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCPT  215 (277)
T ss_dssp             --GCCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEESS
T ss_pred             --HcccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence              112223799999765544 5788999999997 999887653

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.20  E-value=5e-06  Score=76.39  Aligned_cols=126  Identities=23%  Similarity=0.270  Sum_probs=83.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeC-------------CCCCCchhH----HH
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN-------------PDDEPNKSI----SE  212 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~-------------~~~~~~~~~----~~  212 (335)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|+++++++++++.++++|++.+..             +..+....+    ..
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67899999999999999999999999 9999999999999999998753211             000000011    12


Q ss_pred             HHHhhhCCCCccEEEEcCCCh-----H-HHHHHHHhhccCCeEEEEEccCCCccccc--hhHHHhhcCcEEEEee
Q 019822          213 LVKGITHGMGVDYCFECTGVP-----S-LLSEALETTKVGKGKVIVIGVGVDAMVPL--NVIALACGGRTLKGTT  279 (335)
Q Consensus       213 ~i~~~~~g~g~d~vid~~g~~-----~-~~~~~~~~l~~~~G~~v~~g~~~~~~~~~--~~~~~~~~~~~~~g~~  279 (335)
                      .+.+...  ++|+||.|+..+     . .-+..++.++++ ..++.++...+..++.  +...+...++++.+..
T Consensus       268 ~l~e~l~--~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~  339 (405)
T 4dio_A          268 LVAEHIA--KQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHL  339 (405)
T ss_dssp             HHHHHHH--TCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGTCSBTTCCTTEEEEETTEEEEECS
T ss_pred             HHHHHhc--CCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCCCCccccCCCCeEEECCEEEEEeC
Confidence            3333332  699999986322     1 236888999997 9999998644322221  1112333566676654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.13  E-value=1.5e-05  Score=72.68  Aligned_cols=105  Identities=24%  Similarity=0.274  Sum_probs=76.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEe-C--------CCCCCch----hHHHHHHh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-N--------PDDEPNK----SISELVKG  216 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~-~--------~~~~~~~----~~~~~i~~  216 (335)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|+++++++++++.++++|++.+- +        +..+...    .....+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67899999999999999999999999 999999999999999999876431 0        0000000    01223333


Q ss_pred             hhCCCCccEEEEcCCCh-----H-HHHHHHHhhccCCeEEEEEccCCC
Q 019822          217 ITHGMGVDYCFECTGVP-----S-LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~~-----~-~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      ..  +++|+||.++..+     . .-+..++.++++ +.++.++...+
T Consensus       262 ~l--~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~G  306 (381)
T 3p2y_A          262 AI--TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETG  306 (381)
T ss_dssp             HH--TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGT
T ss_pred             HH--hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCC
Confidence            33  2699999986322     1 236888999997 99999986655

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.08  E-value=2.8e-06  Score=66.99  Aligned_cols=108  Identities=13%  Similarity=0.085  Sum_probs=75.3

Q ss_pred             chhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCceEeCCCCCCchhHHH
Q 019822          134 GFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISE  212 (335)
Q Consensus       134 ~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~  212 (335)
                      ++++++.++ +.+....+++|+|+|+|.+|.+.++.++..|+ +|+++++++++.+. +++++... ....+     +.+
T Consensus         5 ~~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~-~~~~~-----~~~   76 (144)
T 3oj0_A            5 KVSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEY-VLIND-----IDS   76 (144)
T ss_dssp             CCSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEE-EECSC-----HHH
T ss_pred             cccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCce-EeecC-----HHH
Confidence            345566655 34444458999999999999999999988999 69999999988765 56777532 22332     333


Q ss_pred             HHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          213 LVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       213 ~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .+.      ++|+|++|++....+. ..+.+.++ +.++.++.+.
T Consensus        77 ~~~------~~Divi~at~~~~~~~-~~~~l~~g-~~vid~~~p~  113 (144)
T 3oj0_A           77 LIK------NNDVIITATSSKTPIV-EERSLMPG-KLFIDLGNPP  113 (144)
T ss_dssp             HHH------TCSEEEECSCCSSCSB-CGGGCCTT-CEEEECCSSC
T ss_pred             Hhc------CCCEEEEeCCCCCcEe-eHHHcCCC-CEEEEccCCc
Confidence            332      5899999998753221 22667776 8888887654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.07  E-value=1.9e-05  Score=62.98  Aligned_cols=91  Identities=19%  Similarity=0.168  Sum_probs=65.0

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      ..++.+|+|+|+|.+|..+++.++..|. +|+++++++++.+.++ +.|...+. .+.   .+ .+.+++. +..++|+|
T Consensus        16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~-~d~---~~-~~~l~~~-~~~~ad~V   88 (155)
T 2g1u_A           16 KQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVV-GDA---AE-FETLKEC-GMEKADMV   88 (155)
T ss_dssp             -CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEE-SCT---TS-HHHHHTT-TGGGCSEE
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEE-ecC---CC-HHHHHHc-CcccCCEE
Confidence            4567899999999999999999999999 9999999998888776 66765332 221   11 1233332 22379999


Q ss_pred             EEcCCChHHHHHHHHhhcc
Q 019822          227 FECTGVPSLLSEALETTKV  245 (335)
Q Consensus       227 id~~g~~~~~~~~~~~l~~  245 (335)
                      |.+++.......+...++.
T Consensus        89 i~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           89 FAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EECSSCHHHHHHHHHHHHH
T ss_pred             EEEeCCcHHHHHHHHHHHH
Confidence            9999987555555555544

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.06  E-value=5.2e-05  Score=56.89  Aligned_cols=94  Identities=12%  Similarity=0.079  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      +..+|+|+|+|.+|..+++.+...| . +|+++++++++.+.+...+...+ .+..+   .   +.+.+...  ++|+||
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~---~---~~~~~~~~--~~d~vi   74 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRMGVATKQVDAKD---E---AGLAKALG--GFDAVI   74 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTTTCEEEECCTTC---H---HHHHHHTT--TCSEEE
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhCCCcEEEecCCC---H---HHHHHHHc--CCCEEE
Confidence            3468999999999999999999999 6 99999999999888876665433 23332   2   33444433  699999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ++++..........+...+ -.++.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~g-~~~~~~   99 (118)
T 3ic5_A           75 SAAPFFLTPIIAKAAKAAG-AHYFDL   99 (118)
T ss_dssp             ECSCGGGHHHHHHHHHHTT-CEEECC
T ss_pred             ECCCchhhHHHHHHHHHhC-CCEEEe
Confidence            9998664433334444443 444443

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.06  E-value=4.7e-06  Score=72.69  Aligned_cols=95  Identities=19%  Similarity=0.190  Sum_probs=69.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCc-eEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .++.+||.+|+|. |..+..+++.. +. +|++++.+++..+.+++.+.. .++..+.   .++     .+..+ .+|+|
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~~-----~~~~~-~fD~v  152 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASS---HRL-----PFSDT-SMDAI  152 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCT---TSC-----SBCTT-CEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcch---hhC-----CCCCC-ceeEE
Confidence            5788999999987 88999999986 66 999999999999998776532 2222221   110     11223 79999


Q ss_pred             EEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          227 FECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       227 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +.... ...+..+.+.|+++ |+++.....
T Consensus       153 ~~~~~-~~~l~~~~~~L~pg-G~l~~~~~~  180 (269)
T 1p91_A          153 IRIYA-PCKAEELARVVKPG-GWVITATPG  180 (269)
T ss_dssp             EEESC-CCCHHHHHHHEEEE-EEEEEEEEC
T ss_pred             EEeCC-hhhHHHHHHhcCCC-cEEEEEEcC
Confidence            96544 44789999999998 999887543

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.95  E-value=3e-05  Score=68.28  Aligned_cols=100  Identities=13%  Similarity=0.187  Sum_probs=73.9

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCce--EeCCCCCCchhHHHHHHhh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMTD--FINPDDEPNKSISELVKGI  217 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~~--v~~~~~~~~~~~~~~i~~~  217 (335)
                      ..+++.++++||.+|+|+.+..++.+++..|+ +|++++.+++..+.+++.    |.+.  ++..+.          .++
T Consensus       116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa----------~~l  184 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDE----------TVI  184 (298)
T ss_dssp             HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCG----------GGG
T ss_pred             HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECch----------hhC
Confidence            34678999999999998877888888888898 999999999988887653    4322  222221          122


Q ss_pred             hCCCCccEEEEcCCCh---HHHHHHHHhhccCCeEEEEEccC
Q 019822          218 THGMGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .+ ..||+|+.+...+   ..++.+.+.|+++ |+++.....
T Consensus       185 ~d-~~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~~  224 (298)
T 3fpf_A          185 DG-LEFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTYT  224 (298)
T ss_dssp             GG-CCCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEECC
T ss_pred             CC-CCcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcCc
Confidence            23 4899999654432   4788999999998 999987643

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.87  E-value=0.00015  Score=59.28  Aligned_cols=95  Identities=22%  Similarity=0.292  Sum_probs=67.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      +++|+|+|.|.+|..+++.++.. |. +|+++++++++.+.+++.|...+. |..+   .   +.+++.++-.++|+|+.
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~---~---~~l~~~~~~~~ad~vi~  111 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATD---P---DFWERILDTGHVKLVLL  111 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTC---H---HHHHTBCSCCCCCEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCC---H---HHHHhccCCCCCCEEEE
Confidence            56899999999999999999998 99 999999999999988888876443 3332   2   23344323347999999


Q ss_pred             cCCChHHHHHHHHhhc---cCCeEEEEE
Q 019822          229 CTGVPSLLSEALETTK---VGKGKVIVI  253 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~---~~~G~~v~~  253 (335)
                      +++.......+...++   +. .+++..
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~-~~ii~~  138 (183)
T 3c85_A          112 AMPHHQGNQTALEQLQRRNYK-GQIAAI  138 (183)
T ss_dssp             CCSSHHHHHHHHHHHHHTTCC-SEEEEE
T ss_pred             eCCChHHHHHHHHHHHHHCCC-CEEEEE
Confidence            9987644444444443   33 455544

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.83  E-value=0.00011  Score=67.72  Aligned_cols=93  Identities=23%  Similarity=0.357  Sum_probs=73.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|.. +.        ++.    +...  +.|+++
T Consensus       217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~-v~--------~Le----eal~--~ADIVi  280 (435)
T 3gvp_A          217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFR-LV--------KLN----EVIR--QVDIVI  280 (435)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHH----HHTT--TCSEEE
T ss_pred             eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCE-ec--------cHH----HHHh--cCCEEE
Confidence            4589999999999999999999999999 999999988877666667753 11        122    2222  589999


Q ss_pred             EcCCChHHHH-HHHHhhccCCeEEEEEccCC
Q 019822          228 ECTGVPSLLS-EALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       228 d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .|.+....+. ..++.++++ +.++-++...
T Consensus       281 ~atgt~~lI~~e~l~~MK~g-ailINvgrg~  310 (435)
T 3gvp_A          281 TCTGNKNVVTREHLDRMKNS-CIVCNMGHSN  310 (435)
T ss_dssp             ECSSCSCSBCHHHHHHSCTT-EEEEECSSTT
T ss_pred             ECCCCcccCCHHHHHhcCCC-cEEEEecCCC
Confidence            9988765565 888999997 8888887654

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.81  E-value=2.2e-05  Score=70.93  Aligned_cols=106  Identities=20%  Similarity=0.159  Sum_probs=68.8

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhc----C-------------CceEeCCC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAF----G-------------MTDFINPD  203 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~l----g-------------a~~v~~~~  203 (335)
                      +.....+.++++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++.    +             .-.++..+
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            44556789999999999876 8888888988764 4999999999887776542    1             11122222


Q ss_pred             CCCchhHHHHHHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccCCeEEEEEccC
Q 019822          204 DEPNKSISELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       204 ~~~~~~~~~~i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .   .+.   ...+..+ .+|+|+-....+ ..+..+.+.|+++ |+++.+...
T Consensus       176 ~---~~~---~~~~~~~-~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~~  221 (336)
T 2b25_A          176 I---SGA---TEDIKSL-TFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVVN  221 (336)
T ss_dssp             T---TCC---C--------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEESS
T ss_pred             h---HHc---ccccCCC-CeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence            1   111   0111222 699998544433 4578999999998 999877543

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.79  E-value=0.00018  Score=62.00  Aligned_cols=103  Identities=17%  Similarity=0.126  Sum_probs=73.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISEL  213 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~  213 (335)
                      +.....+.++++||-+|+|. |..+..+++.++ ..+|++++.+++..+.+++    .|..   .++..+      +.  
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d------~~--  155 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD------IY--  155 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC------GG--
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc------hh--
Confidence            45667889999999999876 888899998853 3399999999988877754    3432   222222      11  


Q ss_pred             HHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccCCeEEEEEccC
Q 019822          214 VKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       214 i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                        +......+|+|+.....+ ..++.+.+.|+++ |+++.+...
T Consensus       156 --~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  196 (255)
T 3mb5_A          156 --EGIEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYTPC  196 (255)
T ss_dssp             --GCCCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEESS
T ss_pred             --hccCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEECC
Confidence              222333699999766544 4789999999998 999887543

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.75  E-value=0.00025  Score=61.94  Aligned_cols=104  Identities=19%  Similarity=0.189  Sum_probs=72.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc-----C--Cc--eEeCCCCCCchhHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAF-----G--MT--DFINPDDEPNKSIS  211 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~l-----g--a~--~v~~~~~~~~~~~~  211 (335)
                      +.....+.++++||.+|+| .|..++.+++..+ ..+|++++.+++..+.+++.     |  ..  .++..+.   .+  
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~---~~--  164 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL---AD--  164 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG---GG--
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch---Hh--
Confidence            4466778999999999988 6888899998763 23999999999888777542     4  22  2222221   11  


Q ss_pred             HHHHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccCCeEEEEEccC
Q 019822          212 ELVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       212 ~~i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                          .......+|+|+.....+ ..+..+.+.|+++ |+++.+...
T Consensus       165 ----~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  205 (280)
T 1i9g_A          165 ----SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVAT  205 (280)
T ss_dssp             ----CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEESS
T ss_pred             ----cCCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeCC
Confidence                011223799998655544 6788999999997 999887654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.75  E-value=0.00011  Score=64.96  Aligned_cols=96  Identities=22%  Similarity=0.216  Sum_probs=72.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      --.+++|+|+|.|.+|.++++.++.+|+ +|++++++.++.+.++++|+.. ++..     ++    .+..  ++.|+|+
T Consensus       152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~~-----~l----~~~l--~~aDvVi  218 (293)
T 3d4o_A          152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHIS-----KA----AQEL--RDVDVCI  218 (293)
T ss_dssp             CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEGG-----GH----HHHT--TTCSEEE
T ss_pred             CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cChh-----hH----HHHh--cCCCEEE
Confidence            3478999999999999999999999999 9999999988877777788653 2211     22    2222  2689999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .+++..-.-...++.++++ +.++.++...
T Consensus       219 ~~~p~~~i~~~~l~~mk~~-~~lin~ar~~  247 (293)
T 3d4o_A          219 NTIPALVVTANVLAEMPSH-TFVIDLASKP  247 (293)
T ss_dssp             ECCSSCCBCHHHHHHSCTT-CEEEECSSTT
T ss_pred             ECCChHHhCHHHHHhcCCC-CEEEEecCCC
Confidence            9987542224567788887 8999887643

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.72  E-value=0.00052  Score=53.45  Aligned_cols=94  Identities=10%  Similarity=0.082  Sum_probs=66.8

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .++|+|+|.|.+|..+++.++..|. +|+++++++++.+.+++.|...+. |..+   .+   .+++. +-.++|+++-+
T Consensus         7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~gd~~~---~~---~l~~a-~i~~ad~vi~~   78 (140)
T 3fwz_A            7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLGNAAN---EE---IMQLA-HLECAKWLILT   78 (140)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEESCTTS---HH---HHHHT-TGGGCSEEEEC
T ss_pred             CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEECCCCC---HH---HHHhc-CcccCCEEEEE
Confidence            4689999999999999999999999 999999999999999888876443 2222   22   23332 23478999999


Q ss_pred             CCChHHHH---HHHHhhccCCeEEEEE
Q 019822          230 TGVPSLLS---EALETTKVGKGKVIVI  253 (335)
Q Consensus       230 ~g~~~~~~---~~~~~l~~~~G~~v~~  253 (335)
                      ++......   ...+.+.+. .+++..
T Consensus        79 ~~~~~~n~~~~~~a~~~~~~-~~iiar  104 (140)
T 3fwz_A           79 IPNGYEAGEIVASARAKNPD-IEIIAR  104 (140)
T ss_dssp             CSCHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCC-CeEEEE
Confidence            98763322   234445554 555544

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.63  E-value=0.0002  Score=63.52  Aligned_cols=96  Identities=20%  Similarity=0.239  Sum_probs=72.2

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      --.+++|+|+|.|.+|.++++.++.+|+ +|++.+++.++.+.++++|.. +++..     +    +.+..  ++.|+|+
T Consensus       154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~~-----~----l~~~l--~~aDvVi  220 (300)
T 2rir_A          154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHTD-----E----LKEHV--KDIDICI  220 (300)
T ss_dssp             CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEGG-----G----HHHHS--TTCSEEE
T ss_pred             CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEchh-----h----HHHHh--hCCCEEE
Confidence            3468899999999999999999999999 999999998887777777764 22221     2    22332  2689999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .+++..-.-...++.++++ +.++.++...
T Consensus       221 ~~~p~~~i~~~~~~~mk~g-~~lin~a~g~  249 (300)
T 2rir_A          221 NTIPSMILNQTVLSSMTPK-TLILDLASRP  249 (300)
T ss_dssp             ECCSSCCBCHHHHTTSCTT-CEEEECSSTT
T ss_pred             ECCChhhhCHHHHHhCCCC-CEEEEEeCCC
Confidence            9988642224567788887 8999888643

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.63  E-value=0.00024  Score=66.62  Aligned_cols=98  Identities=20%  Similarity=0.296  Sum_probs=74.2

Q ss_pred             HHHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822          142 AWKEAKV-EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       142 l~~~~~~-~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      +.+..+. -.|++++|+|+|.+|.+.++.++..|+ +|+++++++.+.+.+...|++ +.+..            +.  -
T Consensus       255 i~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~le------------e~--~  318 (488)
T 3ond_A          255 LMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLE------------DV--V  318 (488)
T ss_dssp             HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGG------------GT--T
T ss_pred             HHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHH------------HH--H
Confidence            3333443 578999999999999999999999999 999999998888777777753 22111            11  1


Q ss_pred             CCccEEEEcCCChHHHH-HHHHhhccCCeEEEEEccC
Q 019822          221 MGVDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       221 ~g~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~  256 (335)
                      ..+|+++++.|....+. ..++.++++ +.++.+|..
T Consensus       319 ~~aDvVi~atG~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          319 SEADIFVTTTGNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             TTCSEEEECSSCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             HhcCEEEeCCCChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            26899999998765554 478888897 888888764

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.54  E-value=0.00079  Score=52.29  Aligned_cols=75  Identities=24%  Similarity=0.316  Sum_probs=57.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      ..+|+|+|+|.+|..+++.+...|. +|+++++++++.+.+++.+...+. |..+   .+   .+++. +-.++|+++.+
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~gd~~~---~~---~l~~~-~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVIADPTD---ES---FYRSL-DLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEECCTTC---HH---HHHHS-CCTTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEECCCCC---HH---HHHhC-CcccCCEEEEe
Confidence            4679999999999999999999999 999999999999988887764332 2222   22   33333 33479999999


Q ss_pred             CCCh
Q 019822          230 TGVP  233 (335)
Q Consensus       230 ~g~~  233 (335)
                      ++..
T Consensus        78 ~~~~   81 (141)
T 3llv_A           78 GSDD   81 (141)
T ss_dssp             CSCH
T ss_pred             cCCH
Confidence            9865

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.51  E-value=0.00052  Score=63.43  Aligned_cols=93  Identities=19%  Similarity=0.218  Sum_probs=71.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|... .        ++.+.+    .  ..|+|+
T Consensus       244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v--------~LeElL----~--~ADIVv  307 (464)
T 3n58_A          244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-V--------TLDDAA----S--TADIVV  307 (464)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-C--------CHHHHG----G--GCSEEE
T ss_pred             cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-c--------cHHHHH----h--hCCEEE
Confidence            4689999999999999999999999999 9999998887766666666532 1        122222    1  589999


Q ss_pred             EcCCChHHH-HHHHHhhccCCeEEEEEccCC
Q 019822          228 ECTGVPSLL-SEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       228 d~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .+.+....+ ...++.++++ +.++-+|...
T Consensus       308 ~atgt~~lI~~e~l~~MK~G-AILINvGRgd  337 (464)
T 3n58_A          308 TTTGNKDVITIDHMRKMKDM-CIVGNIGHFD  337 (464)
T ss_dssp             ECCSSSSSBCHHHHHHSCTT-EEEEECSSST
T ss_pred             ECCCCccccCHHHHhcCCCC-eEEEEcCCCC
Confidence            998876454 5888899997 8888877654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.43  E-value=0.00049  Score=53.34  Aligned_cols=76  Identities=18%  Similarity=0.287  Sum_probs=54.9

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      .++|+|+|+|.+|..+++.++..|. +|+++++++++.+.+++.+...+. .+.   .+ .+.+++. +-.++|+++.++
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-~d~---~~-~~~l~~~-~~~~~d~vi~~~   78 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANA---TE-ENELLSL-GIRNFEYVIVAI   78 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEE-CCT---TC-HHHHHTT-TGGGCSEEEECC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEE-eCC---CC-HHHHHhc-CCCCCCEEEECC
Confidence            4679999999999999999999998 899999988887777666654332 221   11 2233333 123799999999


Q ss_pred             CCh
Q 019822          231 GVP  233 (335)
Q Consensus       231 g~~  233 (335)
                      +..
T Consensus        79 ~~~   81 (144)
T 2hmt_A           79 GAN   81 (144)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            874

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.38  E-value=0.00077  Score=62.27  Aligned_cols=102  Identities=20%  Similarity=0.279  Sum_probs=74.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      .-.+++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|...+         ++.    +...  ..|+++
T Consensus       208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~---------sL~----eal~--~ADVVi  271 (436)
T 3h9u_A          208 MIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL---------LVE----DVVE--EAHIFV  271 (436)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC---------CHH----HHTT--TCSEEE
T ss_pred             cccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec---------CHH----HHHh--hCCEEE
Confidence            3478999999999999999999999999 99999999887777777775321         122    2222  589999


Q ss_pred             EcCCChHHHH-HHHHhhccCCeEEEEEccCCCccccchhHHHh
Q 019822          228 ECTGVPSLLS-EALETTKVGKGKVIVIGVGVDAMVPLNVIALA  269 (335)
Q Consensus       228 d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~  269 (335)
                      .+.+....+. ..++.++++ ..++-++...   ..++...+.
T Consensus       272 lt~gt~~iI~~e~l~~MK~g-AIVINvgRg~---vEID~~~L~  310 (436)
T 3h9u_A          272 TTTGNDDIITSEHFPRMRDD-AIVCNIGHFD---TEIQVAWLK  310 (436)
T ss_dssp             ECSSCSCSBCTTTGGGCCTT-EEEEECSSSG---GGBCHHHHH
T ss_pred             ECCCCcCccCHHHHhhcCCC-cEEEEeCCCC---CccCHHHHH
Confidence            9887654444 667888887 8888887543   344444444

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.37  E-value=0.0012  Score=57.60  Aligned_cols=104  Identities=16%  Similarity=0.218  Sum_probs=72.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---EeCCCCCCchhHHHHHH---hhhCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVK---GITHG  220 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~---~~~~g  220 (335)
                      -+|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++|...   ..|-.+  ..+..+.++   +.. |
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~-G  102 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSAN--LAELDRLYEKVKAEA-G  102 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHH-S
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCC--HHHHHHHHHHHHHHc-C
Confidence            47899999987 9999999999999999 999999999888765 6666432   223332  123332232   223 3


Q ss_pred             CCccEEEEcCCCh----------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          221 MGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       221 ~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                       ++|+++++.|..          +               ..+.+++.+.++ |++|.++...+
T Consensus       103 -~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~~~  163 (273)
T 4fgs_A          103 -RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGSTAG  163 (273)
T ss_dssp             -CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCGGG
T ss_pred             -CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeehhh
Confidence             699999988741          1               234455677776 99998876554

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.29  E-value=0.0039  Score=53.50  Aligned_cols=103  Identities=16%  Similarity=0.060  Sum_probs=67.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-E--eCCCCCCchhHHHHHH---hhhCCCCc
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-F--INPDDEPNKSISELVK---GITHGMGV  223 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v--~~~~~~~~~~~~~~i~---~~~~g~g~  223 (335)
                      +++|||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.+... .  .|-.+  +.+..+.++   +.. | ++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~v~~~~~~~-g-~i   76 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVAD--PLTLKKFVEYAMEKL-Q-RI   76 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTS--HHHHHHHHHHHHHHH-S-CC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCC--HHHHHHHHHHHHHHc-C-CC
Confidence            478999986 9999999999999999 9999999998887775544322 1  23322  123333332   323 3 69


Q ss_pred             cEEEEcCCCh----------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          224 DYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       224 d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      |+++++.|..          +               ..+.+.+.+...+|+++-++...+
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~  136 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA  136 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            9999988631          1               123334454433489998876554

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.27  E-value=0.0037  Score=51.88  Aligned_cols=102  Identities=16%  Similarity=0.183  Sum_probs=71.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i  214 (335)
                      +.....+.++++||-+|+|. |..++.+++. +. +|++++.+++..+.+++    +|..   .++..+.   .+   . 
T Consensus        47 ~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~---~-  116 (204)
T 3njr_A           47 TLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA---PA---A-  116 (204)
T ss_dssp             HHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT---TG---G-
T ss_pred             HHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch---hh---h-
Confidence            34567788999999999986 8888888888 77 99999999998877643    4543   2332222   11   1 


Q ss_pred             HhhhCCCCccEEEEcCCCh-HHHHHHHHhhccCCeEEEEEccC
Q 019822          215 KGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                        +.....+|+|+...+.. ..++.+.+.|+++ |+++.....
T Consensus       117 --~~~~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~~  156 (204)
T 3njr_A          117 --LADLPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAVT  156 (204)
T ss_dssp             --GTTSCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEECS
T ss_pred             --cccCCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEecC
Confidence              11123699999654433 2678999999998 999887553

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.19  E-value=0.0046  Score=51.01  Aligned_cols=104  Identities=11%  Similarity=0.160  Sum_probs=72.4

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc--eEeCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~  215 (335)
                      +.....+.++++||-+|+|. |..++.+++.....+|++++.+++..+.+++    .+.+  .++..+.   .+   .  
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~---~--  102 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA---PE---G--  102 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT---TT---T--
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh---hh---h--
Confidence            44667788999999999985 8888999988644499999999998887754    3432  2222221   01   1  


Q ss_pred             hhhCCCCccEEEEcCC---ChHHHHHHHHhhccCCeEEEEEccC
Q 019822          216 GITHGMGVDYCFECTG---VPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                       +.....+|+|+....   -...++.+.+.|+++ |+++.....
T Consensus       103 -~~~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  144 (204)
T 3e05_A          103 -LDDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAVT  144 (204)
T ss_dssp             -CTTSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEECB
T ss_pred             -hhcCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEecc
Confidence             111136999997654   235778899999998 999887543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.17  E-value=0.00077  Score=57.19  Aligned_cols=100  Identities=15%  Similarity=0.175  Sum_probs=67.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      .+.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+.+...++..+-   .   +.+.+...  ++|+||+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl---~---~~~~~~~~--~~D~vi~   90 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANL---E---EDFSHAFA--SIDAVVF   90 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCT---T---SCCGGGGT--TCSEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEccc---H---HHHHHHHc--CCCEEEE
Confidence            5689999997 9999999999999999 9999999999988877666612332221   1   23444433  6999999


Q ss_pred             cCCChH-------------HHHHHHHhhcc-CCeEEEEEccCCC
Q 019822          229 CTGVPS-------------LLSEALETTKV-GKGKVIVIGVGVD  258 (335)
Q Consensus       229 ~~g~~~-------------~~~~~~~~l~~-~~G~~v~~g~~~~  258 (335)
                      +.|...             ....+++.+.. +.++++.++....
T Consensus        91 ~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           91 AAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             CCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence            987421             11233333332 1268999887654

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.10  E-value=0.00061  Score=57.91  Aligned_cols=104  Identities=21%  Similarity=0.238  Sum_probs=71.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      +.+...+.++++||.+|+| .|..++.+++..+. +|++++.+++..+.+++    .|...+--..    .+.   ...+
T Consensus        83 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~----~d~---~~~~  153 (235)
T 1jg1_A           83 MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVIL----GDG---SKGF  153 (235)
T ss_dssp             HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEE----SCG---GGCC
T ss_pred             HHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE----CCc---ccCC
Confidence            3455678899999999998 68899999998874 99999999988777654    4432221011    111   1112


Q ss_pred             hCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          218 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ..+.++|+|+.+.......+.+.+.|+++ |+++..-.
T Consensus       154 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~~  190 (235)
T 1jg1_A          154 PPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPVG  190 (235)
T ss_dssp             GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             CCCCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            22335999997766554557888999997 98876543

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.08  E-value=0.0061  Score=49.77  Aligned_cols=101  Identities=19%  Similarity=0.207  Sum_probs=66.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCC---------CEEEEEcCChhhHHHHHhcCCceEe-CCCCCCchhHHHHHHh
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGA---------AKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKG  216 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~---------~~V~~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~  216 (335)
                      .+.++++||.+|+|+ |..++.+++..|.         .+|++++.++...     +.....+ ..+- ........+.+
T Consensus        19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~-~~~~~~~~~~~   91 (196)
T 2nyu_A           19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADV-TDPRTSQRILE   91 (196)
T ss_dssp             CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCT-TSHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccC-CCHHHHHHHHH
Confidence            367899999999987 8899999998873         4999999887431     1111223 2221 11334444444


Q ss_pred             hhCCCCccEEEE-----cCCCh------------HHHHHHHHhhccCCeEEEEEcc
Q 019822          217 ITHGMGVDYCFE-----CTGVP------------SLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       217 ~~~g~g~d~vid-----~~g~~------------~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ...+..+|+|+.     +++..            ..+..+.+.|+++ |+++....
T Consensus        92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  146 (196)
T 2nyu_A           92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTW  146 (196)
T ss_dssp             HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEec
Confidence            444457999994     33321            3567888999998 99987644

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.08  E-value=0.0025  Score=54.85  Aligned_cols=104  Identities=20%  Similarity=0.243  Sum_probs=67.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHHHHH---HhhhCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELV---KGITHG  220 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i---~~~~~g  220 (335)
                      -.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++... .  .|-.+  ..+....+   .+.. +
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~-g   81 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIAD--LNEIAVLGAAAGQTL-G   81 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHHh-C
Confidence            35789999987 9999999999999999 999999998887665 3444221 1  23332  12222222   2222 2


Q ss_pred             CCccEEEEcCCCh----------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          221 MGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       221 ~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                       ++|+++++.|..          +               ..+.+++.+..+ |+++.++....
T Consensus        82 -~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~~  142 (255)
T 4eso_A           82 -AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSSVAD  142 (255)
T ss_dssp             -SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCGGG
T ss_pred             -CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECChhh
Confidence             699999988741          1               122334445566 89999876544

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.07  E-value=0.0034  Score=53.76  Aligned_cols=78  Identities=22%  Similarity=0.309  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceE---eCCCCCCchhHHHHHH---hhhCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF---INPDDEPNKSISELVK---GITHGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v---~~~~~~~~~~~~~~i~---~~~~g~  221 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++....   .|-.+  ..+..+.++   +.. + 
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~-g-   79 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISD--PGSVKALFAEIQALT-G-   79 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTC--HHHHHHHHHHHHHHH-S-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHHC-C-
Confidence            5789999987 9999999999999999 999999998877664 44553322   22222  122222222   222 2 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|++.|.
T Consensus        80 ~id~lv~nAg~   90 (247)
T 3rwb_A           80 GIDILVNNASI   90 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.07  E-value=0.004  Score=52.10  Aligned_cols=98  Identities=8%  Similarity=0.028  Sum_probs=63.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHH-HcCCCEEEEEcCChh-hHHHHHhcCC-ceEe--CCCCCCchhHHHHHHhhhCCCCccE
Q 019822          152 SSVAVLGL-GTVGLGAVDGAR-MHGAAKIIGIDKNPW-KKEKGKAFGM-TDFI--NPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~-~~G~~~V~~~~~~~~-~~~~~~~lga-~~v~--~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      ++|||+|+ |.+|.++++.+. ..|+ +|++++++++ +.+.+.+.+. ..++  |..+   .   +.+++...  ++|+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d---~---~~~~~~~~--~~d~   76 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQN---P---GXLEQAVT--NAEV   76 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTTC---H---HHHHHHHT--TCSE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCCC---H---HHHHHHHc--CCCE
Confidence            46999997 999999998888 8999 9999999988 6665532222 1222  3332   2   23444333  6899


Q ss_pred             EEEcCCChHH-HHHHHHhhccC-CeEEEEEccCCC
Q 019822          226 CFECTGVPSL-LSEALETTKVG-KGKVIVIGVGVD  258 (335)
Q Consensus       226 vid~~g~~~~-~~~~~~~l~~~-~G~~v~~g~~~~  258 (335)
                      +|++.|.... ...+++.+... .+++|.++....
T Consensus        77 vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           77 VFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             EEESCCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             EEEcCCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence            9999986311 34555555433 258888876543

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.06  E-value=0.0022  Score=55.00  Aligned_cols=103  Identities=14%  Similarity=0.034  Sum_probs=73.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhc-----CCceE--eCCCCCCchhHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAF-----GMTDF--INPDDEPNKSISEL  213 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~l-----ga~~v--~~~~~~~~~~~~~~  213 (335)
                      +.....+.++++||.+|+|. |..+..+++..+ ..+|++++.+++..+.+++.     |...+  +..+      +   
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d------~---  157 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGK------L---  157 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESC------G---
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECc------h---
Confidence            44667788999999999985 888999998864 23999999999988877553     53222  2111      1   


Q ss_pred             HHhh-hCCCCccEEEEcCCCh-HHHHHHHHhhccCCeEEEEEccC
Q 019822          214 VKGI-THGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       214 i~~~-~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                       .+. .....+|+|+.....+ ..+..+.+.|+++ |+++.+...
T Consensus       158 -~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  200 (258)
T 2pwy_A          158 -EEAELEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLPN  200 (258)
T ss_dssp             -GGCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEESC
T ss_pred             -hhcCCCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeCC
Confidence             111 1223799999655544 6789999999997 999887643

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.04  E-value=0.0021  Score=57.99  Aligned_cols=49  Identities=31%  Similarity=0.359  Sum_probs=42.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  198 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~  198 (335)
                      .++++|.|.|.|.||+.+++.++.+|+ +|++.+.++++.++.+++++..
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~  221 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTA  221 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEE
Confidence            578999999999999999999999999 9999998877766667777643

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.04  E-value=0.0037  Score=53.83  Aligned_cols=79  Identities=20%  Similarity=0.229  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc-----CCc-eE--eCCCCCCchhHHHHHHhhhC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF-----GMT-DF--INPDDEPNKSISELVKGITH  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l-----ga~-~v--~~~~~~~~~~~~~~i~~~~~  219 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ +++     +.. ..  .|-.+  ...+.+.+++...
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   82 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE--PGDIDRLFEKARD   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence            4678999987 9999999999988999 999999988776554 222     211 22  23333  2333344444333


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      ..++|++|++.|
T Consensus        83 ~~gid~lv~~Ag   94 (260)
T 2z1n_A           83 LGGADILVYSTG   94 (260)
T ss_dssp             TTCCSEEEECCC
T ss_pred             hcCCCEEEECCC
Confidence            334999999887

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.04  E-value=0.0044  Score=53.17  Aligned_cols=79  Identities=20%  Similarity=0.241  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eEe--CCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DFI--NPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v~--~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ ++++.. ..+  |-.+  ..+..+.+++..  .+ +
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g-~   80 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSS--EADWTLVMAAVQRRLG-T   80 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTC--HHHHHHHHHHHHHHHC-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHcC-C
Confidence            4678999987 9999999999998999 999999998876654 444432 122  3222  122333333221  12 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|++.|.
T Consensus        81 id~lv~~Ag~   90 (253)
T 1hxh_A           81 LNVLVNNAGI   90 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999998873

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.02  E-value=0.0015  Score=55.68  Aligned_cols=104  Identities=18%  Similarity=0.145  Sum_probs=69.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhhC-
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITH-  219 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~-  219 (335)
                      ....++.+||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++    .|...-+....   .+..+.+.++.. 
T Consensus        56 ~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~~~~~~~~~  131 (239)
T 2hnk_A           56 TKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL---GSALETLQVLIDS  131 (239)
T ss_dssp             HHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHHC
T ss_pred             HHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE---CCHHHHHHHHHhh
Confidence            445678899999987 4889999999874 2399999999988777654    35322111111   223333333221 


Q ss_pred             ------------C-CCccEEEEcCCCh---HHHHHHHHhhccCCeEEEEEc
Q 019822          220 ------------G-MGVDYCFECTGVP---SLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       220 ------------g-~g~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g  254 (335)
                                  . ..||+|+......   ..+..+.+.|+++ |+++...
T Consensus       132 ~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          132 KSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             SSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             cccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence                        1 3799999765543   4568888999997 9988754

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.01  E-value=0.0039  Score=50.00  Aligned_cols=104  Identities=16%  Similarity=0.244  Sum_probs=71.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eE-eCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DF-INPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v-~~~~~~~~~~~~~~i~  215 (335)
                      +.......++++||.+|+|. |..+..+++..+..+|++++.+++..+.+++    .+.. .+ +..+.   .   .   
T Consensus        17 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~---~---~---   86 (178)
T 3hm2_A           17 AISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGA---P---R---   86 (178)
T ss_dssp             HHHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCT---T---G---
T ss_pred             HHHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecch---H---h---
Confidence            34556778899999999985 8899999988743399999999988887754    3443 22 22211   1   1   


Q ss_pred             hhhCC-CCccEEEEcCCC--hHHHHHHHHhhccCCeEEEEEccC
Q 019822          216 GITHG-MGVDYCFECTGV--PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       216 ~~~~g-~g~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .+... ..+|+|+.....  ...++.+.+.|+++ |+++.....
T Consensus        87 ~~~~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  129 (178)
T 3hm2_A           87 AFDDVPDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAVT  129 (178)
T ss_dssp             GGGGCCSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEECS
T ss_pred             hhhccCCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEeec
Confidence            12221 379999965533  34789999999998 999876543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.99  E-value=0.0065  Score=51.56  Aligned_cols=76  Identities=17%  Similarity=0.222  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEe--CCCCCCchhHHHHHHhhhCC-CCcc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFI--NPDDEPNKSISELVKGITHG-MGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~--~~~~~~~~~~~~~i~~~~~g-~g~d  224 (335)
                      +++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ +++....++  |-.+   .+   .+++.... .++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~---~~---~~~~~~~~~~~id   78 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD---WE---ATERALGSVGPVD   78 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HH---HHHHHHTTCCCCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCC---HH---HHHHHHHHcCCCC
Confidence            5689999987 9999999999999999 999999998877654 333222233  3332   22   23332221 2689


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      ++|++.|.
T Consensus        79 ~vi~~Ag~   86 (244)
T 3d3w_A           79 LLVNNAAV   86 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99998873

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.98  E-value=0.01  Score=45.35  Aligned_cols=75  Identities=17%  Similarity=0.160  Sum_probs=53.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++ ++...+. +..+   .   ..+.+. .-.++|+|+.+
T Consensus         5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~---~---~~l~~~-~~~~~d~vi~~   76 (140)
T 1lss_A            5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVINGDCTK---I---KTLEDA-GIEDADMYIAV   76 (140)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEESCTTS---H---HHHHHT-TTTTCSEEEEC
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEEcCCCC---H---HHHHHc-CcccCCEEEEe
Confidence            579999999999999999988998 99999999888777653 5654332 2222   2   123222 12369999999


Q ss_pred             CCChH
Q 019822          230 TGVPS  234 (335)
Q Consensus       230 ~g~~~  234 (335)
                      ++...
T Consensus        77 ~~~~~   81 (140)
T 1lss_A           77 TGKEE   81 (140)
T ss_dssp             CSCHH
T ss_pred             eCCch
Confidence            98763

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.97  E-value=0.012  Score=53.49  Aligned_cols=94  Identities=13%  Similarity=0.047  Sum_probs=67.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      -+|+|+|+|.+|..+++++.. .. +|.+.+++.++.+.+++......+|..+   .   +.+.++..  +.|+|++|++
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d---~---~~l~~~~~--~~DvVi~~~p   86 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN---F---DKLVEVMK--EFELVIGALP   86 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC---H---HHHHHHHT--TCSEEEECCC
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC---H---HHHHHHHh--CCCEEEEecC
Confidence            379999999999999888754 45 8999999999988887664333455443   2   23444333  5899999998


Q ss_pred             ChHHHHHHHHhhccCCeEEEEEccC
Q 019822          232 VPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       232 ~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .......+-.++..+ -+++++...
T Consensus        87 ~~~~~~v~~~~~~~g-~~yvD~s~~  110 (365)
T 3abi_A           87 GFLGFKSIKAAIKSK-VDMVDVSFM  110 (365)
T ss_dssp             GGGHHHHHHHHHHHT-CEEEECCCC
T ss_pred             CcccchHHHHHHhcC-cceEeeecc
Confidence            764556666777776 688887643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.96  E-value=0.0061  Score=53.41  Aligned_cols=74  Identities=19%  Similarity=0.199  Sum_probs=52.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC-----Cc-eEeCCCCCCchhHHHHHHhhhCC
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG-----MT-DFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg-----a~-~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      .-.++++||+|+|++|.+++..+...|+++|+++.++.++.+.+ ++++     .. .+++..     ++.+.+.     
T Consensus       124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~-----~l~~~l~-----  193 (283)
T 3jyo_A          124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR-----GIEDVIA-----  193 (283)
T ss_dssp             TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST-----THHHHHH-----
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH-----HHHHHHh-----
Confidence            34688999999999999999999999997899999999887654 3332     11 122222     2333332     


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                       ++|+||+|++.
T Consensus       194 -~~DiVInaTp~  204 (283)
T 3jyo_A          194 -AADGVVNATPM  204 (283)
T ss_dssp             -HSSEEEECSST
T ss_pred             -cCCEEEECCCC
Confidence             58999999863

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.96  E-value=0.0025  Score=54.52  Aligned_cols=80  Identities=18%  Similarity=0.148  Sum_probs=54.5

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHHHHHHhhhCCC
Q 019822          147 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       147 ~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      ...++++|||+|+ |++|.++++.+...|+ +|+++++++++.+.+ +++.... +  .|-.+  .....+.+++.  + 
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~--~-   83 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLAN--KEECSNLISKT--S-   83 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTS--HHHHHHHHHTC--S-
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCC--HHHHHHHHHhc--C-
Confidence            3457889999987 9999999999999999 999999998887765 3343222 1  23332  12222223322  2 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|++.|.
T Consensus        84 ~id~li~~Ag~   94 (249)
T 3f9i_A           84 NLDILVCNAGI   94 (249)
T ss_dssp             CCSEEEECCC-
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.96  E-value=0.001  Score=56.30  Aligned_cols=102  Identities=17%  Similarity=0.238  Sum_probs=68.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHHHHhhh
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ....++.+||-+|+| .|..++.+++..+..+|++++.+++..+.+++    .|..   .++..+      ....+....
T Consensus        50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d------~~~~~~~~~  122 (233)
T 2gpy_A           50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD------ALQLGEKLE  122 (233)
T ss_dssp             HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC------GGGSHHHHT
T ss_pred             HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC------HHHHHHhcc
Confidence            445678899999988 58888999998743399999999998877754    3432   222222      111122221


Q ss_pred             CCCCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEEcc
Q 019822          219 HGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       219 ~g~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ....||+|+.....   ...+..+.+.|+++ |+++....
T Consensus       123 ~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  161 (233)
T 2gpy_A          123 LYPLFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDNV  161 (233)
T ss_dssp             TSCCEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEETT
T ss_pred             cCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEcC
Confidence            12379999865443   34678888999997 99887643

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.96  E-value=0.011  Score=50.94  Aligned_cols=79  Identities=14%  Similarity=0.243  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CH--HHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCC--ceE--eCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGL-GT--VGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM--TDF--INPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~--vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga--~~v--~~~~~~~~~~~~~~i~~~~  218 (335)
                      .++++||+|+ |.  +|.++++.+...|+ +|+.++++++..+.++    +++.  ..+  .|-.+  ..+..+.+++..
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~   82 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN--DAEIETCFASIK   82 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS--SHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC--HHHHHHHHHHHH
Confidence            5789999986 65  99999999988999 9999998875544433    3332  112  23332  233333333322


Q ss_pred             --CCCCccEEEEcCCC
Q 019822          219 --HGMGVDYCFECTGV  232 (335)
Q Consensus       219 --~g~g~d~vid~~g~  232 (335)
                        .+ ++|+++++.|.
T Consensus        83 ~~~g-~id~li~~Ag~   97 (266)
T 3oig_A           83 EQVG-VIHGIAHCIAF   97 (266)
T ss_dssp             HHHS-CCCEEEECCCC
T ss_pred             HHhC-CeeEEEEcccc
Confidence              12 68999998763

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.95  E-value=0.0026  Score=52.96  Aligned_cols=102  Identities=22%  Similarity=0.284  Sum_probs=70.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG--AAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISEL  213 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G--~~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~  213 (335)
                      +.+.....++.+||.+|+| .|..+..+++..|  . +|++++.+++..+.+++    .+...  +...+      ..  
T Consensus        69 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d------~~--  138 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDG-LVVSIERIPELAEKAERTLRKLGYDNVIVIVGD------GT--  138 (215)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTS-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC------GG--
T ss_pred             HHHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC------cc--
Confidence            4456678899999999998 4889999999886  5 99999999988877754    23322  22111      11  


Q ss_pred             HHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          214 VKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       214 i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                       ..+.....+|+|+.+.......+.+.+.|+++ |+++..-.
T Consensus       139 -~~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  178 (215)
T 2yxe_A          139 -LGYEPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPVG  178 (215)
T ss_dssp             -GCCGGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             -cCCCCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEEC
Confidence             11111237999997766544557888999997 98877643

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.95  E-value=0.0051  Score=53.51  Aligned_cols=78  Identities=23%  Similarity=0.392  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC-ce--E--eCCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM-TD--F--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga-~~--v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+    ++.+. ..  +  .|-.+  ..++.+.+++.. 
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  107 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAIRS  107 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence            4688999987 9999999999998999 999999988776554    22332 11  2  23332  122333332221 


Q ss_pred             -CCCCccEEEEcCC
Q 019822          219 -HGMGVDYCFECTG  231 (335)
Q Consensus       219 -~g~g~d~vid~~g  231 (335)
                       .+ ++|++|++.|
T Consensus       108 ~~g-~iD~vi~~Ag  120 (279)
T 1xg5_A          108 QHS-GVDICINNAG  120 (279)
T ss_dssp             HHC-CCSEEEECCC
T ss_pred             hCC-CCCEEEECCC
Confidence             12 6999999887

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.94  E-value=0.0058  Score=53.33  Aligned_cols=104  Identities=22%  Similarity=0.266  Sum_probs=64.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HH----HHHhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KE----KGKAFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~-~~----~~~~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ |++|.++++.+...|+ +|++++++.++ .+    .+++.+... .  .|-.+  ..+....+++..  
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV--VEDIVRMFEEAVKI  104 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5688999987 9999999999999999 99999887643 22    234445332 2  23332  122333332221  


Q ss_pred             CCCCccEEEEcCCCh----------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          219 HGMGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       219 ~g~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      -+ ++|++|++.|..          +               ..+.+.+.+... |+++.++....
T Consensus       105 ~g-~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~~  167 (283)
T 1g0o_A          105 FG-KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSITG  167 (283)
T ss_dssp             HS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCGGG
T ss_pred             cC-CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEechhh
Confidence            13 699999988731          1               123444555555 89999976543

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.94  E-value=0.011  Score=51.95  Aligned_cols=105  Identities=18%  Similarity=0.258  Sum_probs=66.0

Q ss_pred             CCCCEEEEEcC-CH--HHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceE--eCCCCCCchhHHHHHHhhh-
Q 019822          149 EKGSSVAVLGL-GT--VGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~--vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      -.++++||+|+ |.  +|.++++.+...|+ +|++++++++..+.+    ++.+....  .|-.+  ..+..+.+++.. 
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  105 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVAD--AASIDAVFETLEK  105 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCC--HHHHHHHHHHHHH
Confidence            46789999986 55  99999999999999 999999886544433    23342222  23332  123333333221 


Q ss_pred             -CCCCccEEEEcCCChH-----------------------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          219 -HGMGVDYCFECTGVPS-----------------------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       219 -~g~g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                       -+ ++|++|++.|...                             ..+.+++.+... |+++.++....
T Consensus       106 ~~g-~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~~~  173 (293)
T 3grk_A          106 KWG-KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYYGA  173 (293)
T ss_dssp             HTS-CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECGGG
T ss_pred             hcC-CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeehhh
Confidence             13 6999999887421                             223444555666 99999876543

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.92  E-value=0.008  Score=50.14  Aligned_cols=92  Identities=20%  Similarity=0.267  Sum_probs=62.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      +|||+|+ |.+|..+++.+...|. +|+++++++++.+.+...+...+ .|..+   .+.     +...  ++|+||++.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d---~~~-----~~~~--~~d~vi~~a   70 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLV---LTE-----ADLD--SVDAVVDAL   70 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGG---CCH-----HHHT--TCSEEEECC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccc---ccH-----hhcc--cCCEEEECC
Confidence            5899997 9999999999998999 99999999888776644444332 23222   222     2222  689999998


Q ss_pred             CCh----------HHHHHHHHhhccCCeEEEEEcc
Q 019822          231 GVP----------SLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       231 g~~----------~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      +..          .....+++.+...+++++.++.
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            762          1234555655543268888864

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.91  E-value=0.0015  Score=56.07  Aligned_cols=106  Identities=13%  Similarity=0.178  Sum_probs=70.3

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      ....++.+||-+|+|. |..++.+++.++ ..+|++++.+++..+.+++    .|...-+....   .+..+.+..+.+.
T Consensus        59 ~~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~~l~~~~~~  134 (248)
T 3tfw_A           59 VRLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE---GPALQSLESLGEC  134 (248)
T ss_dssp             HHHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHTCCSC
T ss_pred             HhhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHhcCCC
Confidence            3456789999999875 888889998874 3499999999988877654    35331111111   3344444444333


Q ss_pred             CCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEEccC
Q 019822          221 MGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       221 ~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ..||+|+-....   ...++.+.+.|+++ |.++.-...
T Consensus       135 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~~  172 (248)
T 3tfw_A          135 PAFDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNVV  172 (248)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECCS
T ss_pred             CCeEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCCC
Confidence            479999832222   34678889999998 988876543

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.89  E-value=0.00098  Score=59.34  Aligned_cols=100  Identities=11%  Similarity=0.177  Sum_probs=71.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc---eEeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT---DFINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i  214 (335)
                      +.+...+.++.+||-+|+|. |..+..+++..|+ +|++++.+++..+.+++.    |..   .++..+          +
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d----------~  149 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG----------W  149 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC----------G
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC----------h
Confidence            34556778999999999976 8888899988788 999999999988887553    321   122111          1


Q ss_pred             HhhhCCCCccEEEEc-----CCC---hHHHHHHHHhhccCCeEEEEEccC
Q 019822          215 KGITHGMGVDYCFEC-----TGV---PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       215 ~~~~~g~g~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .++.  ..+|+|+..     ++.   ...+..+.+.|+++ |+++.....
T Consensus       150 ~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  196 (318)
T 2fk8_A          150 EDFA--EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSSV  196 (318)
T ss_dssp             GGCC--CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEEE
T ss_pred             HHCC--CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEec
Confidence            1222  379999975     332   34678888999998 998876543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.89  E-value=0.0049  Score=54.04  Aligned_cols=78  Identities=18%  Similarity=0.287  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHHHHHHhhhCCCCc
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      -+++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++... .  .|-.+  ..+..+.+++.  + ++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~--~-~i   87 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQD--LSSVRRFADGV--S-GA   87 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTC--HHHHHHHHHTC--C-CE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCC--HHHHHHHHHhc--C-CC
Confidence            35789999987 9999999999999999 999999999887765 3444221 1  23333  12233333333  3 78


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|++.|.
T Consensus        88 D~lv~nAg~   96 (291)
T 3rd5_A           88 DVLINNAGI   96 (291)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCcC
Confidence            999998873

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.88  E-value=0.0085  Score=49.74  Aligned_cols=92  Identities=14%  Similarity=0.274  Sum_probs=62.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      +|||+|+ |.+|..+++.+...|. +|+++++++++.+.+. .+...+ .|..+   .+.    +.+   .++|+||++.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d---~~~----~~~---~~~d~vi~~a   69 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFD---LTL----SDL---SDQNVVVDAY   69 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGG---CCH----HHH---TTCSEEEECC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccC---hhh----hhh---cCCCEEEECC
Confidence            6899997 9999999999999998 9999999988877654 333322 22222   222    222   2699999998


Q ss_pred             CCh--------HHHHHHHHhhccC-CeEEEEEccC
Q 019822          231 GVP--------SLLSEALETTKVG-KGKVIVIGVG  256 (335)
Q Consensus       231 g~~--------~~~~~~~~~l~~~-~G~~v~~g~~  256 (335)
                      |..        .....+++.+... .++++.++..
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            753        2334566666543 2688888654

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.86  E-value=0.005  Score=54.72  Aligned_cols=93  Identities=14%  Similarity=0.188  Sum_probs=63.2

Q ss_pred             CEEEEEcCCHHHHHHHHHHHH--cCCCEEEEEcCChhh--HHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          152 SSVAVLGLGTVGLGAVDGARM--HGAAKIIGIDKNPWK--KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~--~G~~~V~~~~~~~~~--~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -+|.|+|+|.+|...+..+..  -+.+-+.++++++++  .+.++++|.....       .+. +.+.+.+++.++|+||
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~-------~~~-e~ll~~~~~~~iDvV~   76 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY-------AGV-EGLIKLPEFADIDFVF   76 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES-------SHH-HHHHHSGGGGGEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc-------CCH-HHHHhccCCCCCcEEE
Confidence            478999999999988888743  466344556666565  5667788864221       122 2333333345799999


Q ss_pred             EcCCChHHHHHHHHhhcc--CCeEEEEE
Q 019822          228 ECTGVPSLLSEALETTKV--GKGKVIVI  253 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~--~~G~~v~~  253 (335)
                      ++++.....+.+..++..  + .++++.
T Consensus        77 ~atp~~~h~~~a~~al~a~~G-k~Vi~e  103 (312)
T 1nvm_B           77 DATSASAHVQNEALLRQAKPG-IRLIDL  103 (312)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTT-CEEEEC
T ss_pred             ECCChHHHHHHHHHHHHhCCC-CEEEEc
Confidence            999977677788888887  7 677663

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.85  E-value=0.0052  Score=52.43  Aligned_cols=79  Identities=18%  Similarity=0.259  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceE-eCCCCCCchhHHHHHHhhh--CCCCcc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGIT--HGMGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~--~g~g~d  224 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++...+ .|-.+  .....+.+++..  .+ ++|
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g-~id   79 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHLG-RLD   79 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHHS-SCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCC--HHHHHHHHHHHHHHcC-CCC
Confidence            4678999987 9999999999999999 999999998877655 44553222 23332  122333333221  12 699


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      ++|++.|.
T Consensus        80 ~lvn~Ag~   87 (245)
T 1uls_A           80 GVVHYAGI   87 (245)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.84  E-value=0.0022  Score=54.77  Aligned_cols=105  Identities=13%  Similarity=0.143  Sum_probs=68.2

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      +-.|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+..+.-.+. ...|-.+  +....+.+++ . | ++|+
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~-~-g-~iDi   81 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITD--SQRLQRLFEA-L-P-RLDV   81 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTC--HHHHHHHHHH-C-S-CCSE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCC--HHHHHHHHHh-c-C-CCCE
Confidence            347899999986 9999999999999999 999999988766543221111 1234333  2333333333 3 3 6999


Q ss_pred             EEEcCCChH-----------------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          226 CFECTGVPS-----------------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       226 vid~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      ++++.|...                       ..+.+++.+...+|++|-++...+
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            999887410                       123345555432399999986554

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.84  E-value=0.0013  Score=58.16  Aligned_cols=101  Identities=14%  Similarity=0.185  Sum_probs=72.4

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i  214 (335)
                      +.+...+.++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..   .++..+      +    
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d------~----  131 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG------W----  131 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC------G----
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC------H----
Confidence            45667788999999999985 8889999998887 99999999998887754    3422   122121      1    


Q ss_pred             HhhhCCCCccEEEEcCCC---------------hHHHHHHHHhhccCCeEEEEEccCC
Q 019822          215 KGITHGMGVDYCFECTGV---------------PSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .++ .+ .+|+|+....-               ...+..+.+.|+++ |+++......
T Consensus       132 ~~~-~~-~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~  186 (302)
T 3hem_A          132 EEF-DE-PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTITI  186 (302)
T ss_dssp             GGC-CC-CCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEEC
T ss_pred             HHc-CC-CccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEec
Confidence            122 33 79999864321               24678889999998 9998876543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.83  E-value=0.0037  Score=54.21  Aligned_cols=79  Identities=23%  Similarity=0.239  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++... .  .|-.+  ..+..+.+++..  .+ +
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g-~  101 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSD--RKSIKQLAEVAEREME-G  101 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTS--HHHHHHHHHHHHHHHT-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCC--HHHHHHHHHHHHHHcC-C
Confidence            5789999987 9999999999999999 999999998877664 4555432 2  23332  122322222221  12 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|++.|.
T Consensus       102 iD~lvnnAg~  111 (266)
T 3grp_A          102 IDILVNNAGI  111 (266)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998874

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.83  E-value=0.0039  Score=51.64  Aligned_cols=101  Identities=12%  Similarity=0.130  Sum_probs=69.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~  215 (335)
                      +.+.....++++||-+|+|. |..+..+++. +. +|++++.+++..+.+++    .+...  ++..+.      .+   
T Consensus        69 ~~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~------~~---  136 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDG------WQ---  136 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG------GG---
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCc------cc---
Confidence            44667788999999999874 8888888887 66 99999999988877754    34322  222211      11   


Q ss_pred             hhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          216 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .......||+|+.........+.+.+.|+++ |+++..-.
T Consensus       137 ~~~~~~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  175 (210)
T 3lbf_A          137 GWQARAPFDAIIVTAAPPEIPTALMTQLDEG-GILVLPVG  175 (210)
T ss_dssp             CCGGGCCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEEC
T ss_pred             CCccCCCccEEEEccchhhhhHHHHHhcccC-cEEEEEEc
Confidence            1112337999997655443446788999997 98877643

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.83  E-value=0.0087  Score=51.52  Aligned_cols=77  Identities=14%  Similarity=0.217  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHH---hhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVK---GIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~---~~~  218 (335)
                      +++.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|-.+  +.+..+.++   +..
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSK--KKDVEEFVRRTFETY   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            6789999986 9999999999999999 999999999887654    3455432   223332  233333332   323


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                       | ++|+++++.|
T Consensus        83 -G-~iDiLVNNAG   93 (254)
T 4fn4_A           83 -S-RIDVLCNNAG   93 (254)
T ss_dssp             -S-CCCEEEECCC
T ss_pred             -C-CCCEEEECCc
Confidence             3 6999999887

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.82  E-value=0.0014  Score=54.26  Aligned_cols=132  Identities=17%  Similarity=0.234  Sum_probs=78.8

Q ss_pred             cceeeEE-ecccceEEcCCCCCcccccccccchhhhhHHHHHhc--CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEE
Q 019822          104 TWSEYMV-IDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA--KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIG  180 (335)
Q Consensus       104 ~~~~~~~-v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~--~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~  180 (335)
                      .|.+|.. .+....+.+++++++..+..-     +... +.+..  .+.++.+||-+|+|. |..+..+++ .+..+|++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~~-----~~~~-~~~~l~~~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~   88 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNHQ-----TTQL-AMLGIERAMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLA   88 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCHH-----HHHH-HHHHHHHHCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCCc-----cHHH-HHHHHHHhccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEE
Confidence            4666666 677788888888766554221     1111 11222  256889999999875 777777776 45559999


Q ss_pred             EcCChhhHHHHHh----cCCc--eEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCCh---HHHHHHHHhhccCCeEEE
Q 019822          181 IDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKGITHGMGVDYCFECTGVP---SLLSEALETTKVGKGKVI  251 (335)
Q Consensus       181 ~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~---~~~~~~~~~l~~~~G~~v  251 (335)
                      ++.+++..+.+++    .+..  .++..+.   .       +... ..+|+|+......   ..++.+.+.|+++ |+++
T Consensus        89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~-------~~~~-~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~  156 (205)
T 3grz_A           89 TDISDESMTAAEENAALNGIYDIALQKTSL---L-------ADVD-GKFDLIVANILAEILLDLIPQLDSHLNED-GQVI  156 (205)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCCCEEEESST---T-------TTCC-SCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEE
T ss_pred             EECCHHHHHHHHHHHHHcCCCceEEEeccc---c-------ccCC-CCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEE
Confidence            9999988877754    3432  2222221   1       1122 3799999755433   2345566678897 9988


Q ss_pred             EEcc
Q 019822          252 VIGV  255 (335)
Q Consensus       252 ~~g~  255 (335)
                      ....
T Consensus       157 ~~~~  160 (205)
T 3grz_A          157 FSGI  160 (205)
T ss_dssp             EEEE
T ss_pred             EEec
Confidence            7644

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.82  E-value=0.0096  Score=51.29  Aligned_cols=105  Identities=22%  Similarity=0.302  Sum_probs=68.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceE---eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF---INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~v---~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      +|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|.+..   .|-.+  +.+..+.+++... .
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTD--ELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTC--HHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHHC
Confidence            6889999986 9999999999999999 999999998876553    34453322   23222  2333333333221 1


Q ss_pred             CCccEEEEcCCChH-------------------------HHHHHHHhhc---cCCeEEEEEccCCC
Q 019822          221 MGVDYCFECTGVPS-------------------------LLSEALETTK---VGKGKVIVIGVGVD  258 (335)
Q Consensus       221 ~g~d~vid~~g~~~-------------------------~~~~~~~~l~---~~~G~~v~~g~~~~  258 (335)
                      .++|+++++.|...                         ..+.+++.+.   .+ |++|-++....
T Consensus        85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~-G~IVnisS~~~  149 (255)
T 4g81_D           85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSG-GKIINIGSLTS  149 (255)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEEECCGGG
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCC-CEEEEEeehhh
Confidence            26999999887410                         2234455552   34 89999986654

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.81  E-value=0.012  Score=51.41  Aligned_cols=87  Identities=20%  Similarity=0.262  Sum_probs=61.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|....        .+..+.++      +.|+||-|+.
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~------~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA--------ATPCEVVE------SCPVTFAMLA   66 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC--------SSHHHHHH------HCSEEEECCS
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh------cCCEEEEEcC
Confidence            478999999999999999998999 99999999999888877775321        12222332      4688888888


Q ss_pred             ChHHHHHHH-------HhhccCCeEEEEEc
Q 019822          232 VPSLLSEAL-------ETTKVGKGKVIVIG  254 (335)
Q Consensus       232 ~~~~~~~~~-------~~l~~~~G~~v~~g  254 (335)
                      .+..+...+       +.+.++ ..++..+
T Consensus        67 ~~~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           67 DPAAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             CHHHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            653444444       445554 5555554

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.81  E-value=0.0044  Score=53.24  Aligned_cols=79  Identities=19%  Similarity=0.250  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++... .  .|-.+  ..++.+.+++..  -+ +
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g-~   79 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI--EEDWQRVVAYAREEFG-S   79 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC--HHHHHHHHHHHHHHHS-C
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCC--HHHHHHHHHHHHHHcC-C
Confidence            4678999987 9999999999999999 999999998877654 4444221 1  23332  123333333221  12 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|++.|.
T Consensus        80 iD~lv~nAg~   89 (254)
T 1hdc_A           80 VDGLVNNAGI   89 (254)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.80  E-value=0.0095  Score=50.08  Aligned_cols=102  Identities=12%  Similarity=0.130  Sum_probs=67.0

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHh----cCCc--eEeCCCCCCchhHHHHHHhh
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~  217 (335)
                      .+.+++.+||-+|+|. |..++.+++.+  +. +|++++.+++..+.+++    .|..  .+ ....   .+..+.+..+
T Consensus        52 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i-~~~~---gda~~~l~~~  125 (221)
T 3dr5_A           52 TNGNGSTGAIAITPAA-GLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRV-RFLL---SRPLDVMSRL  125 (221)
T ss_dssp             SCCTTCCEEEEESTTH-HHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGE-EEEC---SCHHHHGGGS
T ss_pred             hCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcE-EEEE---cCHHHHHHHh
Confidence            3444556999999875 88899999986  45 99999999988777643    4533  22 1111   2333333333


Q ss_pred             hCCCCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEEcc
Q 019822          218 THGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       218 ~~g~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ..+ .||+||-....   ...++.+.+.|+++ |.++.-..
T Consensus       126 ~~~-~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~dn~  164 (221)
T 3dr5_A          126 AND-SYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLADA  164 (221)
T ss_dssp             CTT-CEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEETTT
T ss_pred             cCC-CcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEeCC
Confidence            233 79999843322   23678889999997 88887543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.80  E-value=0.005  Score=52.88  Aligned_cols=78  Identities=24%  Similarity=0.308  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEe--CCCCCCchhHHHHHHhhh--CCCCcc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI--NPDDEPNKSISELVKGIT--HGMGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~--~~~~~~~~~~~~~i~~~~--~g~g~d  224 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+..++++. ..+  |-.+  ..+..+.+++..  .+ ++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~--~~~~~~~~~~~~~~~g-~iD   79 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLED--ERERVRFVEEAAYALG-RVD   79 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTC--HHHHHHHHHHHHHHHS-CCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCC--HHHHHHHHHHHHHHcC-CCC
Confidence            4688999987 9999999999999999 99999998877333444432 322  3332  123333333221  13 699


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      ++|++.|.
T Consensus        80 ~lv~~Ag~   87 (256)
T 2d1y_A           80 VLVNNAAI   87 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.79  E-value=0.012  Score=51.75  Aligned_cols=79  Identities=15%  Similarity=0.323  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceEe--CCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDFI--NPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g--~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~v~--~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+ |  ++|.++++.+...|+ +|++++++++..+.+    ++.+....+  |-.+  ..+..+.+++..  
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  105 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSD--AESVDNMFKVLAEE  105 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5789999987 5  999999999999999 999999887654443    333432322  3332  223333333221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -+ ++|++|++.|.
T Consensus       106 ~g-~iD~lVnnAG~  118 (296)
T 3k31_A          106 WG-SLDFVVHAVAF  118 (296)
T ss_dssp             HS-CCSEEEECCCC
T ss_pred             cC-CCCEEEECCCc
Confidence            13 69999998874

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.79  E-value=0.0036  Score=55.31  Aligned_cols=95  Identities=19%  Similarity=0.088  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc--eEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT--DFINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~--~v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      -++++++|+|+|++|.+++..+...|+.+|+++.++.++.+.+ ++++..  .++        ++ +.+.+...  ++|+
T Consensus       139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--------~~-~~~~~~~~--~aDi  207 (297)
T 2egg_A          139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF--------SL-AEAETRLA--EYDI  207 (297)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE--------CH-HHHHHTGG--GCSE
T ss_pred             CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee--------eH-HHHHhhhc--cCCE
Confidence            3678999999999999999999999987999999998886554 566542  122        12 22333322  6999


Q ss_pred             EEEcCCChHH-----HHHHHHhhccCCeEEEEEcc
Q 019822          226 CFECTGVPSL-----LSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       226 vid~~g~~~~-----~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ||+|++....     .......+.++ ..++++.-
T Consensus       208 vIn~t~~~~~~~~~~~~i~~~~l~~~-~~v~D~~y  241 (297)
T 2egg_A          208 IINTTSVGMHPRVEVQPLSLERLRPG-VIVSDIIY  241 (297)
T ss_dssp             EEECSCTTCSSCCSCCSSCCTTCCTT-CEEEECCC
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEcCC
Confidence            9999986421     00112345564 56666654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.78  E-value=0.0045  Score=53.17  Aligned_cols=80  Identities=14%  Similarity=0.175  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+    ++.+... .  .|-.+  ..+..+.+++.....
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN--EDEVTAFLNAADAHA   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC--HHHHHHHHHHHHhhC
Confidence            5688999987 9999999999999999 999999998876554    2334321 1  23332  123333333221112


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|++.|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            79999998873

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.78  E-value=0.0079  Score=53.46  Aligned_cols=76  Identities=17%  Similarity=0.206  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC---hhhHHHH-Hhc----CCc-eEeCCCCCCchhHHHHHHhhhC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN---PWKKEKG-KAF----GMT-DFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~---~~~~~~~-~~l----ga~-~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      -.++++||+|+|++|.+++..+...|+++|+++.|+   .++.+.+ +++    +.. .+++..+   .   +.+.+...
T Consensus       152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~---~---~~l~~~l~  225 (315)
T 3tnl_A          152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED---H---EQLRKEIA  225 (315)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC---H---HHHHHHHH
T ss_pred             ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch---H---HHHHhhhc
Confidence            368899999999999999999999999889999998   6665543 232    321 2333332   1   12222221


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                        .+|+||+|++.
T Consensus       226 --~aDiIINaTp~  236 (315)
T 3tnl_A          226 --ESVIFTNATGV  236 (315)
T ss_dssp             --TCSEEEECSST
T ss_pred             --CCCEEEECccC
Confidence              58999999863

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.78  E-value=0.0045  Score=52.81  Aligned_cols=77  Identities=18%  Similarity=0.214  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE--eCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF--INPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v--~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+.++.....  .|-.+   .+..+.+.+.. + ++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~-~-~id~l   78 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFANEV-E-RLDVL   78 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHHHC-S-CCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCC---HHHHHHHHHHh-C-CCCEE
Confidence            4678999987 9999999999999999 99999998877665444321112  23333   33333333322 2 69999


Q ss_pred             EEcCCC
Q 019822          227 FECTGV  232 (335)
Q Consensus       227 id~~g~  232 (335)
                      |++.|.
T Consensus        79 v~~Ag~   84 (246)
T 2ag5_A           79 FNVAGF   84 (246)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998873

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.77  E-value=0.0064  Score=52.90  Aligned_cols=71  Identities=14%  Similarity=0.141  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC--ceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM--TDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga--~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .+++++|+|+|++|.+++..+...|+++|+++.|+.++.+.+ ++++.  ..+....+            +.. .++|+|
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~------------l~~-~~~Div  185 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA------------LEG-QSFDIV  185 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG------------GTT-CCCSEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH------------hcc-cCCCEE
Confidence            678999999999999999999889977999999999886654 55543  22332221            111 379999


Q ss_pred             EEcCCCh
Q 019822          227 FECTGVP  233 (335)
Q Consensus       227 id~~g~~  233 (335)
                      |+|++..
T Consensus       186 InaTp~g  192 (272)
T 3pwz_A          186 VNATSAS  192 (272)
T ss_dssp             EECSSGG
T ss_pred             EECCCCC
Confidence            9998753

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.77  E-value=0.006  Score=52.10  Aligned_cols=80  Identities=19%  Similarity=0.305  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc--eE--eCCCCCCchhHHHHHHhhhCCCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT--DF--INPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~--~v--~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ ++++..  ..  .|-.+  .....+.+++...-.++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTD--AEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC--HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCC--HHHHHHHHHHHHhhCCC
Confidence            5678999987 9999999999999999 999999998876654 344422  11  23332  12233333222111269


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|++.|.
T Consensus        87 d~li~~Ag~   95 (254)
T 2wsb_A           87 SILVNSAGI   95 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999998873

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.76  E-value=0.0052  Score=52.76  Aligned_cols=35  Identities=26%  Similarity=0.376  Sum_probs=32.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      +.+|+|+|+|++|..+++.+...|..++..++.+.
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            47899999999999999999999988999999876

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.75  E-value=0.0042  Score=53.43  Aligned_cols=78  Identities=19%  Similarity=0.281  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+ ++++... .  .|-.+  ..+..+.+++..  .+ +
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g-~   83 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISK--EADVDAAVEAALSKFG-K   83 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHS-C
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHhcC-C
Confidence            4689999987 9999999999999999 999999999887765 4454322 2  23332  122333333221  12 6


Q ss_pred             ccEEEEcCC
Q 019822          223 VDYCFECTG  231 (335)
Q Consensus       223 ~d~vid~~g  231 (335)
                      +|++|++.|
T Consensus        84 id~li~~Ag   92 (261)
T 3n74_A           84 VDILVNNAG   92 (261)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999877

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.73  E-value=0.0068  Score=52.74  Aligned_cols=74  Identities=15%  Similarity=0.137  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -++++++|+|+|++|.+++..+...|+ +|+++.++.++.+.+ ++++...-++..+   .      .++.. .++|+++
T Consensus       117 l~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~---~------~~~~~-~~~DivV  185 (271)
T 1nyt_A          117 RPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS---M------DELEG-HEFDLII  185 (271)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC---S------GGGTT-CCCSEEE
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec---H------HHhcc-CCCCEEE
Confidence            367899999999999999999999997 999999998886554 5554310011111   0      11111 3799999


Q ss_pred             EcCCCh
Q 019822          228 ECTGVP  233 (335)
Q Consensus       228 d~~g~~  233 (335)
                      ++++..
T Consensus       186 n~t~~~  191 (271)
T 1nyt_A          186 NATSSG  191 (271)
T ss_dssp             ECCSCG
T ss_pred             ECCCCC
Confidence            999865

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.73  E-value=0.0042  Score=54.21  Aligned_cols=79  Identities=19%  Similarity=0.185  Sum_probs=53.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHHHHHHhhh--CCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGIT--HGM  221 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g~  221 (335)
                      -.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++... .  .|-.+  ..+..+.+++..  -+ 
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g-  100 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSS--AKDAESMVEKTTAKWG-  100 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHS-
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHcC-
Confidence            35789999987 9999999999999999 999999998877665 4455322 1  23332  122322232221  12 


Q ss_pred             CccEEEEcCC
Q 019822          222 GVDYCFECTG  231 (335)
Q Consensus       222 g~d~vid~~g  231 (335)
                      ++|++|++.|
T Consensus       101 ~iD~lv~nAg  110 (277)
T 4dqx_A          101 RVDVLVNNAG  110 (277)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999887

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.73  E-value=0.0044  Score=53.35  Aligned_cols=79  Identities=16%  Similarity=0.250  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|++++++.++.+.+ ++++... .  .|-.+  ..+..+.+++..  -+ +
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g-~   82 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTR--QDSIDAAIAATVEHAG-G   82 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHSS-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC--HHHHHHHHHHHHHHcC-C
Confidence            5789999987 9999999999999999 999999998877654 4454322 2  23332  122333333221  12 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|++.|.
T Consensus        83 id~lv~~Ag~   92 (259)
T 4e6p_A           83 LDILVNNAAL   92 (259)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999998874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.73  E-value=0.021  Score=49.15  Aligned_cols=104  Identities=19%  Similarity=0.233  Sum_probs=64.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc-----CCc-eE--eCCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF-----GMT-DF--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l-----ga~-~v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ +++     +.. ..  .|-.+  ..+..+.+++.. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   82 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVD   82 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC--HHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 999999988765543 222     111 12  23332  122333333221 


Q ss_pred             -CCCCccEEEEcCCCh--H---------------HHHHHHHhhcc-----CCeEEEEEccCCC
Q 019822          219 -HGMGVDYCFECTGVP--S---------------LLSEALETTKV-----GKGKVIVIGVGVD  258 (335)
Q Consensus       219 -~g~g~d~vid~~g~~--~---------------~~~~~~~~l~~-----~~G~~v~~g~~~~  258 (335)
                       -+ ++|++|++.|..  +               ..+.+++.+..     . |+++.++....
T Consensus        83 ~~g-~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~  143 (267)
T 2gdz_A           83 HFG-RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSLAG  143 (267)
T ss_dssp             HHS-CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCGGG
T ss_pred             HcC-CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCC-CEEEEeCCccc
Confidence             12 689999998742  1               11233444433     4 89998876543

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.73  E-value=0.02  Score=50.55  Aligned_cols=75  Identities=23%  Similarity=0.216  Sum_probs=55.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.....+...           +..  +..|+||-|+.
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~-----------e~~--~~aDvvi~~vp   73 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASAR-----------EFA--GVVDALVILVV   73 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSST-----------TTT--TTCSEEEECCS
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHH-----------HHH--hcCCEEEEECC
Confidence            579999999999999999888999 9999999999999988888654222111           111  15688888887


Q ss_pred             ChHHHHHHH
Q 019822          232 VPSLLSEAL  240 (335)
Q Consensus       232 ~~~~~~~~~  240 (335)
                      .+..++..+
T Consensus        74 ~~~~~~~v~   82 (303)
T 3g0o_A           74 NAAQVRQVL   82 (303)
T ss_dssp             SHHHHHHHH
T ss_pred             CHHHHHHHH
Confidence            654445443

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.71  E-value=0.012  Score=51.04  Aligned_cols=86  Identities=12%  Similarity=0.078  Sum_probs=61.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      +++++|+|+|++|.+++..+...|. +|+++.|+.++.+.+.+++.. +....+            +   ..+|+||+|+
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~~------------l---~~~DiVInaT  180 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEPP------------K---SAFDLIINAT  180 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSCC------------S---SCCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHHH------------h---ccCCEEEEcc
Confidence            8899999999999999999999995 999999999887766577743 333332            1   1689999988


Q ss_pred             CCh-----HH-HHHHHHhhccCCeEEEEEc
Q 019822          231 GVP-----SL-LSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       231 g~~-----~~-~~~~~~~l~~~~G~~v~~g  254 (335)
                      +..     .. .+.+...++++ ..++++.
T Consensus       181 p~Gm~~~~~l~~~~l~~~l~~~-~~v~D~v  209 (269)
T 3phh_A          181 SASLHNELPLNKEVLKGYFKEG-KLAYDLA  209 (269)
T ss_dssp             TTCCCCSCSSCHHHHHHHHHHC-SEEEESC
T ss_pred             cCCCCCCCCCChHHHHhhCCCC-CEEEEeC
Confidence            642     11 12223356775 6666664

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.69  E-value=0.012  Score=50.66  Aligned_cols=95  Identities=24%  Similarity=0.417  Sum_probs=65.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eEeCCCCCCchhHHHHHHhhhCCCC
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      +.++++||-+|+|+ |..++.+++ .|. +|++++.++...+.+++    .+.. .++.      .++...   +..+ .
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~------~d~~~~---~~~~-~  184 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEAA---LPFG-P  184 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHHH---GGGC-C
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEE------CChhhc---CcCC-C
Confidence            67889999999876 777777666 688 99999999988877654    3432 2221      223222   2233 7


Q ss_pred             ccEEEEcCCC---hHHHHHHHHhhccCCeEEEEEccC
Q 019822          223 VDYCFECTGV---PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       223 ~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +|+|+.....   ...+..+.+.|+++ |+++..+..
T Consensus       185 fD~Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~~  220 (254)
T 2nxc_A          185 FDLLVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             EEEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             CCEEEECCcHHHHHHHHHHHHHHcCCC-CEEEEEeec
Confidence            9999965432   23567788899997 999887654

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.69  E-value=0.017  Score=51.47  Aligned_cols=89  Identities=16%  Similarity=0.225  Sum_probs=62.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...        .+..+.++      +.|+||-++
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~--------~~~~e~~~------~aDvVi~~v   95 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH--------EQARAAAR------DADIVVSML   95 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE--------SSHHHHHT------TCSEEEECC
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee--------CCHHHHHh------cCCEEEEEC
Confidence            4589999999999999999988999 99999999999988877775321        11222221      478888888


Q ss_pred             CChHHHHHHH------HhhccCCeEEEEEcc
Q 019822          231 GVPSLLSEAL------ETTKVGKGKVIVIGV  255 (335)
Q Consensus       231 g~~~~~~~~~------~~l~~~~G~~v~~g~  255 (335)
                      ..+..+...+      ..+.++ ..++..+.
T Consensus        96 p~~~~~~~v~~~~~~~~~l~~~-~~vi~~st  125 (320)
T 4dll_A           96 ENGAVVQDVLFAQGVAAAMKPG-SLFLDMAS  125 (320)
T ss_dssp             SSHHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred             CCHHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence            7654444443      244554 55555544

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.69  E-value=0.012  Score=51.14  Aligned_cols=79  Identities=18%  Similarity=0.269  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHh---hh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKG---IT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~---~~  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+...   ..|-.+  ..+..+.+++   ..
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHVF   96 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            5688999987 9999999999999999 999999998776543    2234321   123332  1223333332   22


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      ++ ++|++|++.|.
T Consensus        97 ~g-~id~lv~nAg~  109 (273)
T 1ae1_A           97 DG-KLNILVNNAGV  109 (273)
T ss_dssp             TS-CCCEEEECCCC
T ss_pred             CC-CCcEEEECCCC
Confidence            23 79999998874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.68  E-value=0.0074  Score=50.97  Aligned_cols=77  Identities=17%  Similarity=0.185  Sum_probs=51.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-----hcCCce-E--eCCCCCCchhHHHHHH---hhh
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-----AFGMTD-F--INPDDEPNKSISELVK---GIT  218 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-----~lga~~-v--~~~~~~~~~~~~~~i~---~~~  218 (335)
                      ++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.     +.+... .  .|-.+  ..+..+.++   +..
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~   78 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK--AESVEEFSKKVLERF   78 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHCC-HHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC--HHHHHHHHHHHHHhc
Confidence            578999987 9999999999999999 9999999988766542     234322 2  23332  122222222   212


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                       + ++|++|++.|.
T Consensus        79 -g-~id~li~~Ag~   90 (235)
T 3l77_A           79 -G-DVDVVVANAGL   90 (235)
T ss_dssp             -S-SCSEEEECCCC
T ss_pred             -C-CCCEEEECCcc
Confidence             2 69999998873

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.68  E-value=0.008  Score=51.48  Aligned_cols=79  Identities=16%  Similarity=0.191  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----c--C--CceE--eCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----F--G--MTDF--INPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----l--g--a~~v--~~~~~~~~~~~~~~i~~~~  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+.+    .  +  ....  .|-.+  ..+..+.+++..
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   82 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD--CTKADTEIKDIH   82 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC--HHHHHHHHHHHH
Confidence            5678999987 9999999999988999 99999999887665422    1  2  1122  23332  122333333221


Q ss_pred             --CCCCccEEEEcCCC
Q 019822          219 --HGMGVDYCFECTGV  232 (335)
Q Consensus       219 --~g~g~d~vid~~g~  232 (335)
                        .+ ++|++|++.|.
T Consensus        83 ~~~g-~iD~lvnnAg~   97 (250)
T 3nyw_A           83 QKYG-AVDILVNAAAM   97 (250)
T ss_dssp             HHHC-CEEEEEECCCC
T ss_pred             HhcC-CCCEEEECCCc
Confidence              12 69999998874

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.68  E-value=0.014  Score=51.24  Aligned_cols=87  Identities=20%  Similarity=0.226  Sum_probs=61.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+++.|...   ..     +..+.++      +.|+||.|+..
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~-----~~~~~~~------~~D~vi~~v~~   71 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---AS-----TAKAIAE------QCDVIITMLPN   71 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---CS-----SHHHHHH------HCSEEEECCSS
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---cC-----CHHHHHh------CCCEEEEECCC
Confidence            79999999999999988888898 9999999999888887766431   11     2222232      47999999986


Q ss_pred             hHHHHHHH-------HhhccCCeEEEEEcc
Q 019822          233 PSLLSEAL-------ETTKVGKGKVIVIGV  255 (335)
Q Consensus       233 ~~~~~~~~-------~~l~~~~G~~v~~g~  255 (335)
                      +..++..+       ..+.++ ..++.++.
T Consensus        72 ~~~~~~~~~~~~~l~~~l~~~-~~vv~~s~  100 (299)
T 1vpd_A           72 SPHVKEVALGENGIIEGAKPG-TVLIDMSS  100 (299)
T ss_dssp             HHHHHHHHHSTTCHHHHCCTT-CEEEECSC
T ss_pred             HHHHHHHHhCcchHhhcCCCC-CEEEECCC
Confidence            64455444       445565 56665543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.68  E-value=0.0077  Score=51.88  Aligned_cols=79  Identities=18%  Similarity=0.385  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----ga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ +++    +... .  .|-.+  ..++.+.+++..  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT--PEGVDAVVESVRSS   82 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 999999998776543 222    4321 2  23332  122333332221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -+ ++|++|++.|.
T Consensus        83 ~g-~id~lv~~Ag~   95 (263)
T 3ai3_A           83 FG-GADILVNNAGT   95 (263)
T ss_dssp             HS-SCSEEEECCCC
T ss_pred             cC-CCCEEEECCCC
Confidence            12 69999998873

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.67  E-value=0.0077  Score=51.48  Aligned_cols=79  Identities=18%  Similarity=0.214  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHH-HHHhcCCce-E--eCCCCCCchhHHHHHHhhh--CCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKE-KGKAFGMTD-F--INPDDEPNKSISELVKGIT--HGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~-~~~~-~~~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g~  221 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++ ++.+ .+++.+... .  .|-.+  ..+..+.+++..  -+ 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g-   81 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFG-   81 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHcC-
Confidence            4678999987 9999999999999999 999999887 5554 345555322 1  23332  122333333221  13 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|++.|.
T Consensus        82 ~id~lv~nAg~   92 (249)
T 2ew8_A           82 RCDILVNNAGI   92 (249)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.67  E-value=0.016  Score=48.95  Aligned_cols=75  Identities=17%  Similarity=0.217  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-c-CCceE-eCCCCCCchhHHHHHHhhhCC-CCcc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F-GMTDF-INPDDEPNKSISELVKGITHG-MGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l-ga~~v-~~~~~~~~~~~~~~i~~~~~g-~g~d  224 (335)
                      +++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+.+ + +...+ .|-.+   .+   .+++.... .++|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~---~~---~~~~~~~~~~~id   78 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD---WD---ATEKALGGIGPVD   78 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HH---HHHHHHTTCCCCS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCCC---HH---HHHHHHHHcCCCC
Confidence            5678999987 9999999999999999 99999998877665533 3 33222 23332   22   23332221 2689


Q ss_pred             EEEEcCC
Q 019822          225 YCFECTG  231 (335)
Q Consensus       225 ~vid~~g  231 (335)
                      ++|++.|
T Consensus        79 ~vi~~Ag   85 (244)
T 1cyd_A           79 LLVNNAA   85 (244)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999887

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.66  E-value=0.011  Score=49.83  Aligned_cols=78  Identities=9%  Similarity=0.065  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceE--eCCCCCCchhHHHHHHhhh--CCCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF--INPDDEPNKSISELVKGIT--HGMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v--~~~~~~~~~~~~~~i~~~~--~g~g~  223 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ ++++....  .|-.+  ..++.+.+++..  -+ ++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~-~i   79 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVRE--EGDWARAVAAMEEAFG-EL   79 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--HHHHHHHHHHHHHHHS-CC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCC--HHHHHHHHHHHHHHcC-CC
Confidence            3568999987 9999999999999999 999999988877655 33432222  23332  122333333221  12 69


Q ss_pred             cEEEEcCC
Q 019822          224 DYCFECTG  231 (335)
Q Consensus       224 d~vid~~g  231 (335)
                      |++|++.|
T Consensus        80 d~li~~Ag   87 (234)
T 2ehd_A           80 SALVNNAG   87 (234)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.65  E-value=0.0041  Score=52.77  Aligned_cols=78  Identities=12%  Similarity=0.192  Sum_probs=52.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc-e--EeCCCCCCchhHHHHHHhhh--CCCCc
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT-D--FINPDDEPNKSISELVKGIT--HGMGV  223 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~-~--v~~~~~~~~~~~~~~i~~~~--~g~g~  223 (335)
                      ++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. +++.. .  ..|-.+  ..+..+.+++..  .+ ++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g-~i   78 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAH--HEDVDVAFAAAVEWGG-LP   78 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTS--HHHHHHHHHHHHHHHC-SC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCC--HHHHHHHHHHHHHhcC-CC
Confidence            578999987 9999999999989999 9999999988876653 33321 1  123332  122333232221  13 69


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|++.|.
T Consensus        79 d~lvnnAg~   87 (235)
T 3l6e_A           79 ELVLHCAGT   87 (235)
T ss_dssp             SEEEEECCC
T ss_pred             cEEEECCCC
Confidence            999998874

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.65  E-value=0.015  Score=51.46  Aligned_cols=88  Identities=20%  Similarity=0.214  Sum_probs=61.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+...        .+..+.++      ..|+||-|+.
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~--------~~~~~~~~------~aDvvi~~vp   86 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC--------ESPAEVIK------KCKYTIAMLS   86 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC--------SSHHHHHH------HCSEEEECCS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc--------CCHHHHHH------hCCEEEEEcC
Confidence            579999999999999999999999 99999999999988888775321        12222232      3688888887


Q ss_pred             ChHHHHHHH-------HhhccCCeEEEEEcc
Q 019822          232 VPSLLSEAL-------ETTKVGKGKVIVIGV  255 (335)
Q Consensus       232 ~~~~~~~~~-------~~l~~~~G~~v~~g~  255 (335)
                      .+..+...+       ..+.++ ..++.++.
T Consensus        87 ~~~~~~~v~~~~~~l~~~l~~g-~~vv~~st  116 (310)
T 3doj_A           87 DPCAALSVVFDKGGVLEQICEG-KGYIDMST  116 (310)
T ss_dssp             SHHHHHHHHHSTTCGGGGCCTT-CEEEECSC
T ss_pred             CHHHHHHHHhCchhhhhccCCC-CEEEECCC
Confidence            654444444       234443 45555543

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.65  E-value=0.015  Score=52.20  Aligned_cols=132  Identities=11%  Similarity=0.140  Sum_probs=80.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHH-H-cCCCEE-EEEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          152 SSVAVLGLGTVGLGAVDGAR-M-HGAAKI-IGIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~-~-~G~~~V-~~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -+|.|+|+|.+|...++.++ . -++ ++ .+.++++++.+. ++++|...+++       ++.    ++....++|+|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~-~~vav~d~~~~~~~~~a~~~g~~~~~~-------~~~----~~l~~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGV-KLVAACALDSNQLEWAKNELGVETTYT-------NYK----DMIDTENIDAIF   76 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSE-EEEEEECSCHHHHHHHHHTTCCSEEES-------CHH----HHHTTSCCSEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCc-EEEEEecCCHHHHHHHHHHhCCCcccC-------CHH----HHhcCCCCCEEE
Confidence            47899999999998887776 4 466 54 456778877755 46678754442       222    223334799999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEEccCCCccccch----hHHHh-hc-CcEEEEeeccCCCCcCcHHHHHHHHhCCCC
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN----VIALA-CG-GRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~----~~~~~-~~-~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~  301 (335)
                      .|++.....+.+..++..+  .-+++..+..  .+..    +.... .+ ++.+......+  ....+..+.+++.+|++
T Consensus        77 i~tp~~~h~~~~~~al~~G--~~v~~eKp~~--~~~~~~~~l~~~a~~~~~~~~~~~~~~r--~~p~~~~~~~~i~~g~i  150 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNAG--LNVFCEKPLG--LDFNEVDEMAKVIKSHPNQIFQSGFMRR--YDDSYRYAKKIVDNGDI  150 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHTT--CEEEECSCCC--SCHHHHHHHHHHHHTCTTSCEECCCGGG--TCHHHHHHHHHHHTTTT
T ss_pred             EeCChHhHHHHHHHHHHCC--CEEEEcCCCC--CCHHHHHHHHHHHHhCCCCeEEEecccc--cCHHHHHHHHHHHcCCC
Confidence            9999877778888888774  4455543321  1111    11111 23 44444222111  22347788889998875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.64  E-value=0.01  Score=52.00  Aligned_cols=104  Identities=17%  Similarity=0.145  Sum_probs=64.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHH----HHhcCCce-E--eCCCCCCchhHHHHHH---h
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KEK----GKAFGMTD-F--INPDDEPNKSISELVK---G  216 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~-~~~----~~~lga~~-v--~~~~~~~~~~~~~~i~---~  216 (335)
                      -.++++||+|+ |++|.++++.+...|+ +|+++++++++ .+.    +++.+... .  .|-.+  ..+..+.++   +
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  121 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD--EQHCKDIVQETVR  121 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTS--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence            35789999987 9999999999999999 99999887653 222    23344332 2  23332  122222232   2


Q ss_pred             hhCCCCccEEEEcCCCh-----------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          217 ITHGMGVDYCFECTGVP-----------S---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~~-----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      .. + ++|++|++.|..           +               ..+.+++.+... |+++.++....
T Consensus       122 ~~-g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~iv~isS~~~  186 (291)
T 3ijr_A          122 QL-G-SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG-DVIINTASIVA  186 (291)
T ss_dssp             HH-S-SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT-CEEEEECCTHH
T ss_pred             Hc-C-CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CEEEEEechHh
Confidence            22 2 699999987631           0               123334455565 89998876543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.64  E-value=0.0076  Score=51.86  Aligned_cols=78  Identities=19%  Similarity=0.284  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCce-E--eCCCCCCchhHHHHHHhh---h
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K---AFGMTD-F--INPDDEPNKSISELVKGI---T  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~---~lga~~-v--~~~~~~~~~~~~~~i~~~---~  218 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ +   +.+... .  .|-.+  ..+..+.+++.   .
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHF   84 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4688999987 9999999999988999 999999988776543 2   234321 1  23332  12233333322   2


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                      ++ ++|++|++.|
T Consensus        85 ~g-~id~lv~~Ag   96 (260)
T 2ae2_A           85 HG-KLNILVNNAG   96 (260)
T ss_dssp             TT-CCCEEEECCC
T ss_pred             CC-CCCEEEECCC
Confidence            13 7999999887

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.64  E-value=0.0095  Score=52.86  Aligned_cols=75  Identities=19%  Similarity=0.182  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC---hhhHHHH-Hhc----CCc-eEeCCCCCCchhH-HHHHHhhh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN---PWKKEKG-KAF----GMT-DFINPDDEPNKSI-SELVKGIT  218 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~---~~~~~~~-~~l----ga~-~v~~~~~~~~~~~-~~~i~~~~  218 (335)
                      -.++++||+|+|++|.+++..+...|+++|+++.|+   .++.+.+ +++    +.. .+++..+   .++ .+.+.   
T Consensus       146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~---l~~~~~~l~---  219 (312)
T 3t4e_A          146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLAD---QHAFTEALA---  219 (312)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTC---HHHHHHHHH---
T ss_pred             cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHh---hhhhHhhcc---
Confidence            357899999999999999999999999899999999   5555443 222    221 2333332   111 12222   


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                         .+|+||+|++.
T Consensus       220 ---~~DiIINaTp~  230 (312)
T 3t4e_A          220 ---SADILTNGTKV  230 (312)
T ss_dssp             ---HCSEEEECSST
T ss_pred             ---CceEEEECCcC
Confidence               58999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.63  E-value=0.0085  Score=51.16  Aligned_cols=78  Identities=18%  Similarity=0.259  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMT-DF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.    +.+.. ..  .|-.+  .....+.+++..  -
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD--RQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 9999999999999999 9999999987765542    23432 12  23332  122333333221  1


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      + ++|++|++.|
T Consensus        83 g-~id~lv~nAg   93 (247)
T 2jah_A           83 G-GLDILVNNAG   93 (247)
T ss_dssp             S-CCSEEEECCC
T ss_pred             C-CCCEEEECCC
Confidence            3 6999999887

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.63  E-value=0.0083  Score=51.94  Aligned_cols=80  Identities=16%  Similarity=0.372  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh----cCCce-E--eCCCCCCchhHHHHHHhhh-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KA----FGMTD-F--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~----lga~~-v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      ..++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++    .+... .  .|-.+  ..++.+.+++.. 
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~   95 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKE   95 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            45788999987 9999999999999999 999999988776543 22    24322 1  23332  122333333221 


Q ss_pred             -CCCCccEEEEcCCC
Q 019822          219 -HGMGVDYCFECTGV  232 (335)
Q Consensus       219 -~g~g~d~vid~~g~  232 (335)
                       -+ ++|++|++.|.
T Consensus        96 ~~g-~iD~lvnnAg~  109 (267)
T 1vl8_A           96 KFG-KLDTVVNAAGI  109 (267)
T ss_dssp             HHS-CCCEEEECCCC
T ss_pred             HcC-CCCEEEECCCc
Confidence             13 69999998873

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.62  E-value=0.0081  Score=52.45  Aligned_cols=77  Identities=23%  Similarity=0.263  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc---CCce-Ee--CCCCCCchhHHHHHH---hhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF---GMTD-FI--NPDDEPNKSISELVK---GIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l---ga~~-v~--~~~~~~~~~~~~~i~---~~~  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++   +... .+  |-.+  .......++   +..
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGD--EALHEALVELAVRRF   83 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            5788999987 9999999999999999 9999999988766542 22   3222 22  3222  122222222   222


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                       + ++|++|++.|
T Consensus        84 -g-~iD~lvnnAg   94 (280)
T 3tox_A           84 -G-GLDTAFNNAG   94 (280)
T ss_dssp             -S-CCCEEEECCC
T ss_pred             -C-CCCEEEECCC
Confidence             2 6999999887

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.61  E-value=0.0051  Score=53.75  Aligned_cols=79  Identities=18%  Similarity=0.171  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ ++++... .  .|-.+  ..+..+.+++..  .+ +
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g-~   79 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRS--LQDQKRAAERCLAAFG-K   79 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTC--HHHHHHHHHHHHHHHS-C
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHHHHHhcC-C
Confidence            4689999987 9999999999999999 999999998887765 3444322 1  23332  122333333221  13 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|+++++.|.
T Consensus        80 iD~lvnnAg~   89 (281)
T 3zv4_A           80 IDTLIPNAGI   89 (281)
T ss_dssp             CCEEECCCCC
T ss_pred             CCEEEECCCc
Confidence            9999998873

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.61  E-value=0.0035  Score=53.71  Aligned_cols=76  Identities=18%  Similarity=0.198  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCce---EeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFGMTD---FINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lga~~---v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      .|+.+||+|+ +++|.+.++.+...|+ +|+.++++++  ..+.+++.|...   ..|-.+   ..   .+++....-++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d---~~---~v~~~~~~g~i   80 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFAD---PL---AAKDSFTDAGF   80 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTS---TT---TTTTSSTTTCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCC---HH---HHHHHHHhCCC
Confidence            5889999986 9999999999999999 9999998753  345566666432   123222   11   12222222279


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |+++++.|.
T Consensus        81 DiLVNNAGi   89 (247)
T 4hp8_A           81 DILVNNAGI   89 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.60  E-value=0.0047  Score=51.88  Aligned_cols=106  Identities=16%  Similarity=0.133  Sum_probs=69.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      ....++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++    .|...-+....   .+..+.+.++...
T Consensus        65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~~~~~~~~  140 (229)
T 2avd_A           65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALETLDELLAA  140 (229)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHHT
T ss_pred             HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE---cCHHHHHHHHHhc
Confidence            445678899999987 5888899998763 3399999999988777654    34311111111   2233334333321


Q ss_pred             ---CCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEEccC
Q 019822          221 ---MGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       221 ---~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                         ..+|+|+-....   ...+..+.+.|+++ |.++.....
T Consensus       141 ~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~~  181 (229)
T 2avd_A          141 GEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRVL  181 (229)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECCS
T ss_pred             CCCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEECCC
Confidence               379999843332   24678899999997 998876543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.60  E-value=0.0044  Score=53.83  Aligned_cols=78  Identities=15%  Similarity=0.213  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---EeCCCCCCchhHHHHHH---hhhCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVK---GITHGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~---~~~~g~  221 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++...   ..|-.+  ..+..+.++   +.. + 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~-g-   84 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTN--EVSVRALIDFTIDTF-G-   84 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHH-S-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC--HHHHHHHHHHHHHHc-C-
Confidence            5789999987 9999999999999999 999999998877654 4455321   233333  122333232   222 2 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|+++++.|.
T Consensus        85 ~id~lv~nAg~   95 (271)
T 3tzq_B           85 RLDIVDNNAAH   95 (271)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.60  E-value=0.0052  Score=52.58  Aligned_cols=79  Identities=27%  Similarity=0.365  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc---eEeCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT---DFINPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~---~v~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++..   ...|-.+  ..+..+.+++..  -+ +
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g-~   83 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN--PESIEAVLKAITDEFG-G   83 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHHC-C
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC--HHHHHHHHHHHHHHcC-C
Confidence            5788999987 9999999999999999 999999998877665 333321   1234333  122333333221  12 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|+++++.|.
T Consensus        84 iD~lv~nAg~   93 (248)
T 3op4_A           84 VDILVNNAGI   93 (248)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.60  E-value=0.0096  Score=51.62  Aligned_cols=79  Identities=22%  Similarity=0.270  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceE--eCCCCCCchhHHHHHHhhh--CCCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF--INPDDEPNKSISELVKGIT--HGMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v--~~~~~~~~~~~~~~i~~~~--~g~g~  223 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++.....  .|-.+  ..+..+.+++..  -+ ++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g-~i   83 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ--EDDVKTLVSETIRRFG-RL   83 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHS-CC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCC--HHHHHHHHHHHHHHcC-CC
Confidence            5689999987 9999999999999999 9999999988776553 3332222  23332  122333332221  12 69


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|++.|.
T Consensus        84 D~lv~nAg~   92 (270)
T 1yde_A           84 DCVVNNAGH   92 (270)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998863

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.58  E-value=0.0075  Score=51.82  Aligned_cols=78  Identities=23%  Similarity=0.330  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ ++++.. .+  .|-.+  ...+.+.+++..  .+ +
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g-~   86 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS--EKDVQTALALAKGKFG-R   86 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHS-C
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHHCC-C
Confidence            5689999987 9999999999999999 999999988766554 444432 12  23332  122333333221  12 6


Q ss_pred             ccEEEEcCC
Q 019822          223 VDYCFECTG  231 (335)
Q Consensus       223 ~d~vid~~g  231 (335)
                      +|++|++.|
T Consensus        87 id~li~~Ag   95 (265)
T 2o23_A           87 VDVAVNCAG   95 (265)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999876

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.58  E-value=0.0027  Score=55.41  Aligned_cols=100  Identities=12%  Similarity=0.147  Sum_probs=70.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc---eEeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT---DFINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i  214 (335)
                      +.+...+.++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |..   .++..+      +    
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d------~----  123 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG------W----  123 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC------G----
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC------h----
Confidence            34556678899999999875 8888889977898 999999999988877543    321   122111      1    


Q ss_pred             HhhhCCCCccEEEEc-----CC---ChHHHHHHHHhhccCCeEEEEEccC
Q 019822          215 KGITHGMGVDYCFEC-----TG---VPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       215 ~~~~~g~g~d~vid~-----~g---~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .++.  ..+|+|+..     ++   -...+..+.+.|+++ |+++.....
T Consensus       124 ~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  170 (287)
T 1kpg_A          124 EQFD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTIT  170 (287)
T ss_dssp             GGCC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEEE
T ss_pred             hhCC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEec
Confidence            1222  379999864     22   134678889999998 998876543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.57  E-value=0.027  Score=49.43  Aligned_cols=103  Identities=18%  Similarity=0.156  Sum_probs=63.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHH----HHhcCCceE-e--CCCCCCchhHHHHHH---h
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP--WKKEK----GKAFGMTDF-I--NPDDEPNKSISELVK---G  216 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~--~~~~~----~~~lga~~v-~--~~~~~~~~~~~~~i~---~  216 (335)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++.  ++.+.    +++.+.... +  |-.+  ..+..+.++   +
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  124 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSD--ESFARSLVHKARE  124 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 999988763  22322    234453322 2  2222  122222222   2


Q ss_pred             hhCCCCccEEEEcCCCh-----------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          217 ITHGMGVDYCFECTGVP-----------S---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~~-----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      .. + ++|+++++.|..           +               ..+.++..+.++ |+++.++....
T Consensus       125 ~~-g-~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~~~  189 (294)
T 3r3s_A          125 AL-G-GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSIQA  189 (294)
T ss_dssp             HH-T-CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCGGG
T ss_pred             Hc-C-CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECChhh
Confidence            22 3 699999988731           0               122334455666 89999976544

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.57  E-value=0.01  Score=55.96  Aligned_cols=93  Identities=19%  Similarity=0.237  Sum_probs=69.0

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      .-.+++|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|.. +.   +     +    .++..  ..|+|+
T Consensus       274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~-~~---~-----l----~ell~--~aDiVi  337 (494)
T 3d64_A          274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYR-VV---T-----M----EYAAD--KADIFV  337 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCE-EC---C-----H----HHHTT--TCSEEE
T ss_pred             ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCE-eC---C-----H----HHHHh--cCCEEE
Confidence            3578999999999999999999999999 999999988775444455653 11   1     2    22222  589999


Q ss_pred             EcCCChHHH-HHHHHhhccCCeEEEEEccCC
Q 019822          228 ECTGVPSLL-SEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       228 d~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .+++....+ ...++.++++ ..++.++...
T Consensus       338 ~~~~t~~lI~~~~l~~MK~g-AilINvgrg~  367 (494)
T 3d64_A          338 TATGNYHVINHDHMKAMRHN-AIVCNIGHFD  367 (494)
T ss_dssp             ECSSSSCSBCHHHHHHCCTT-EEEEECSSSS
T ss_pred             ECCCcccccCHHHHhhCCCC-cEEEEcCCCc
Confidence            988755444 4677888997 8888887643

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.57  E-value=0.013  Score=51.00  Aligned_cols=78  Identities=17%  Similarity=0.194  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+    ++.+... .  .|-.+  ..+..+.+++..  -
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVERY   97 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            4678999987 9999999999999999 999999998776543    2234321 2  23332  122333333221  1


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      + ++|++|++.|
T Consensus        98 g-~iD~lv~~Ag  108 (277)
T 2rhc_B           98 G-PVDVLVNNAG  108 (277)
T ss_dssp             C-SCSEEEECCC
T ss_pred             C-CCCEEEECCC
Confidence            2 6999999887

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.57  E-value=0.0093  Score=48.75  Aligned_cols=101  Identities=19%  Similarity=0.225  Sum_probs=68.5

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCC-c--eEeCCCCCCchhHHHHHHh
Q 019822          145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGM-T--DFINPDDEPNKSISELVKG  216 (335)
Q Consensus       145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lga-~--~v~~~~~~~~~~~~~~i~~  216 (335)
                      ...+.++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++    .|. .  .++..+.   .+    +..
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~----~~~   88 (197)
T 3eey_A           17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH---QN----MDK   88 (197)
T ss_dssp             HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG---GG----GGG
T ss_pred             HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH---HH----Hhh
Confidence            34678899999999875 888888888864 2399999999988877644    333 1  2232221   11    111


Q ss_pred             hhCCCCccEEEEcCCC---------------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          217 ITHGMGVDYCFECTGV---------------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ... ..+|+|+...+.               ...+..+.+.|+++ |+++....
T Consensus        89 ~~~-~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  140 (197)
T 3eey_A           89 YID-CPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIY  140 (197)
T ss_dssp             TCC-SCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             hcc-CCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEc
Confidence            223 379999865432               24688999999997 99987754

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.57  E-value=0.0095  Score=50.18  Aligned_cols=75  Identities=9%  Similarity=0.072  Sum_probs=50.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc--e-EeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT--D-FINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~--~-v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      +++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+. +++..  . ..|-.+  .....+.+++. .. .+|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~-~~-~~d~l   76 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLAS--HQEVEQLFEQL-DS-IPSTV   76 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTC--HHHHHHHHHSC-SS-CCSEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCC--HHHHHHHHHHH-hh-cCCEE
Confidence            36899987 9999999999999999 8999999998877763 44321  1 233333  12233333333 22 35999


Q ss_pred             EEcCC
Q 019822          227 FECTG  231 (335)
Q Consensus       227 id~~g  231 (335)
                      +++.|
T Consensus        77 v~~Ag   81 (230)
T 3guy_A           77 VHSAG   81 (230)
T ss_dssp             EECCC
T ss_pred             EEeCC
Confidence            99887

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.56  E-value=0.01  Score=51.00  Aligned_cols=78  Identities=19%  Similarity=0.280  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-h---cCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A---FGMT-DF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~---lga~-~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. +   .+.. ..  .|-.+  ..+..+.+++..  .
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN--TDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5688999987 9999999999999999 9999999988776653 2   2322 11  23332  122333333221  1


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      + ++|++|++.|
T Consensus        82 g-~id~lv~nAg   92 (257)
T 3imf_A           82 G-RIDILINNAA   92 (257)
T ss_dssp             S-CCCEEEECCC
T ss_pred             C-CCCEEEECCC
Confidence            3 6999999887

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.56  E-value=0.0072  Score=50.39  Aligned_cols=97  Identities=12%  Similarity=0.134  Sum_probs=63.0

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      +|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+  .+. .++..+-   .+..+.+++...  ++|+||++.+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D~---~d~~~~~~~~~~--~~d~vi~~ag   72 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFDV---DWTPEEMAKQLH--GMDAIINVSG   72 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECCT---TSCHHHHHTTTT--TCSEEEECCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEecc---cCCHHHHHHHHc--CCCEEEECCc
Confidence            6899987 9999999999998998 999999988765432  122 2232222   221345555554  6999999988


Q ss_pred             ChH---------HHHHHHHhhccC-CeEEEEEccCCC
Q 019822          232 VPS---------LLSEALETTKVG-KGKVIVIGVGVD  258 (335)
Q Consensus       232 ~~~---------~~~~~~~~l~~~-~G~~v~~g~~~~  258 (335)
                      ...         ....+++.+... .++++.++....
T Consensus        73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  109 (219)
T 3dqp_A           73 SGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS  109 (219)
T ss_dssp             CTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred             CCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence            531         123444444432 158998886554

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.56  E-value=0.015  Score=53.80  Aligned_cols=95  Identities=19%  Similarity=0.234  Sum_probs=67.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      ..+|+|+|.|.+|..+++.++..|. +|++++.++++.+.+++.|...++ |..+   .+   .+++. +-.++|+|+-+
T Consensus         4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~GDat~---~~---~L~~a-gi~~A~~viv~   75 (413)
T 3l9w_A            4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYGDATR---MD---LLESA-GAAKAEVLINA   75 (413)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEESCTTC---HH---HHHHT-TTTTCSEEEEC
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEcCCCC---HH---HHHhc-CCCccCEEEEC
Confidence            4579999999999999999999999 999999999999999998875443 2222   22   33333 33478999999


Q ss_pred             CCChHHHH---HHHHhhccCCeEEEEEc
Q 019822          230 TGVPSLLS---EALETTKVGKGKVIVIG  254 (335)
Q Consensus       230 ~g~~~~~~---~~~~~l~~~~G~~v~~g  254 (335)
                      ++....-.   ...+.+.+. -+++.-.
T Consensus        76 ~~~~~~n~~i~~~ar~~~p~-~~Iiara  102 (413)
T 3l9w_A           76 IDDPQTNLQLTEMVKEHFPH-LQIIARA  102 (413)
T ss_dssp             CSSHHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             CCChHHHHHHHHHHHHhCCC-CeEEEEE
Confidence            98764322   333444454 4555443

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.55  E-value=0.015  Score=49.96  Aligned_cols=78  Identities=10%  Similarity=0.171  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+.+ .+++++.+.+    ++.+.. ..  .|-.+  ..+..+.+++..  
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   83 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN--AAEVEAAISAAADK   83 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 88888 5555544332    334432 12  23332  122333333221  


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                      -+ ++|+++++.|
T Consensus        84 ~g-~id~lv~nAg   95 (259)
T 3edm_A           84 FG-EIHGLVHVAG   95 (259)
T ss_dssp             HC-SEEEEEECCC
T ss_pred             hC-CCCEEEECCC
Confidence            12 6999999876

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.55  E-value=0.007  Score=52.29  Aligned_cols=78  Identities=22%  Similarity=0.235  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc-----CCce-E--eCCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF-----GMTD-F--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l-----ga~~-v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++     +... .  .|-.+  ..+..+.+++.. 
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   88 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE   88 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence            5688999987 9999999999988999 9999999987765432 21     3221 2  23332  123333333221 


Q ss_pred             -CCCCccEEEEcCC
Q 019822          219 -HGMGVDYCFECTG  231 (335)
Q Consensus       219 -~g~g~d~vid~~g  231 (335)
                       .+ ++|++|++.|
T Consensus        89 ~~g-~id~lv~nAg  101 (267)
T 1iy8_A           89 RFG-RIDGFFNNAG  101 (267)
T ss_dssp             HHS-CCSEEEECCC
T ss_pred             HcC-CCCEEEECCC
Confidence             12 6999999886

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.54  E-value=0.0043  Score=54.01  Aligned_cols=79  Identities=18%  Similarity=0.127  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHH---hhhCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVK---GITHG  220 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~---~~~~g  220 (335)
                      ..++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++.. ..  .|-.+  ..+..+.++   +.. +
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~-g  101 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTD--PDSVRALFTATVEKF-G  101 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTS--HHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCC--HHHHHHHHHHHHHHc-C
Confidence            35688999987 9999999999999999 999999998877665 444421 22  23332  122333332   222 2


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                       ++|++|++.|.
T Consensus       102 -~iD~lVnnAg~  112 (272)
T 4dyv_A          102 -RVDVLFNNAGT  112 (272)
T ss_dssp             -CCCEEEECCCC
T ss_pred             -CCCEEEECCCC
Confidence             69999998874

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.54  E-value=0.0095  Score=50.90  Aligned_cols=78  Identities=23%  Similarity=0.291  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCce-E--eCCCCCCchhHHHHHH---hhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTD-F--INPDDEPNKSISELVK---GIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~i~---~~~  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.    +.+... .  .|-.+  ..+..+.++   +..
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSD--PESAKAMADRTLAEF   84 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5789999987 9999999999999999 9999999988766542    223221 2  23332  122222222   222


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                       + ++|++|++.|.
T Consensus        85 -g-~id~li~~Ag~   96 (253)
T 3qiv_A           85 -G-GIDYLVNNAAI   96 (253)
T ss_dssp             -S-CCCEEEECCCC
T ss_pred             -C-CCCEEEECCCc
Confidence             2 69999998874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.54  E-value=0.0076  Score=53.21  Aligned_cols=80  Identities=21%  Similarity=0.314  Sum_probs=53.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh--
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~--  218 (335)
                      -.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+...   ..|-.+  ..+..+.+++..  
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  105 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH--LDEMVRLADEAFRL  105 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence            36789999987 9999999999999999 999999998877654    2234321   233333  122333333221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|++|++.|.
T Consensus       106 ~g-~id~lvnnAg~  118 (301)
T 3tjr_A          106 LG-GVDVVFSNAGI  118 (301)
T ss_dssp             HS-SCSEEEECCCC
T ss_pred             CC-CCCEEEECCCc
Confidence            12 69999998873

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.53  E-value=0.0092  Score=51.41  Aligned_cols=78  Identities=17%  Similarity=0.172  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ +++... ..  .|-.+  ..+..+.+++..  -+ +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g-~   81 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFG-G   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHS-C
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCC--HHHHHHHHHHHHHHcC-C
Confidence            4688999987 9999999999988999 999999998776654 333321 11  23332  122333333221  12 6


Q ss_pred             ccEEEEcCC
Q 019822          223 VDYCFECTG  231 (335)
Q Consensus       223 ~d~vid~~g  231 (335)
                      +|++|++.|
T Consensus        82 iD~lv~~Ag   90 (260)
T 1nff_A           82 LHVLVNNAG   90 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.53  E-value=0.014  Score=50.85  Aligned_cols=78  Identities=15%  Similarity=0.189  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCceEe--CCCCCCchhHHHHHHhhh--CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---GMTDFI--NPDDEPNKSISELVKGIT--HG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---ga~~v~--~~~~~~~~~~~~~i~~~~--~g  220 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ +++   +....+  |-.+  .....+.+++..  .+
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSS--EAGARRLAQALGELSA  104 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTS--HHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCC--HHHHHHHHHHHHHhcC
Confidence            4678999987 9999999999999999 999999998776543 332   211122  3222  122333333221  13


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                       ++|++|++.|
T Consensus       105 -~iD~lvnnAg  114 (276)
T 2b4q_A          105 -RLDILVNNAG  114 (276)
T ss_dssp             -CCSEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6999999887

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.53  E-value=0.0041  Score=54.26  Aligned_cols=78  Identities=22%  Similarity=0.335  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHH---hhhCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVK---GITHGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~---~~~~g~  221 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++.. ..  .|-.+  ..+..+.++   +.. + 
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~-g-  102 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSD--EQQIIAMVDACVAAF-G-  102 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTC--HHHHHHHHHHHHHHH-S-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCC--HHHHHHHHHHHHHHc-C-
Confidence            5788999986 9999999999999999 999999998877665 445432 12  23333  122222222   222 2 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|++.|.
T Consensus       103 ~iD~lvnnAg~  113 (277)
T 3gvc_A          103 GVDKLVANAGV  113 (277)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999998874

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.52  E-value=0.021  Score=49.46  Aligned_cols=103  Identities=19%  Similarity=0.272  Sum_probs=63.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~-~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      -.++++||+|+ +++|.+.++.+...|+ +|+.++++ +++.+.+    ++.+... .  .|-.+  ..+..+.+++.. 
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  105 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD--AEAIEQAIRETVE  105 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence            36789999987 9999999999999999 88888544 4444332    3345332 2  23332  233333333221 


Q ss_pred             -CCCCccEEEEcCCCh----------H---------------HHHHHHHhhccCCeEEEEEccC
Q 019822          219 -HGMGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       219 -~g~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                       .+ ++|++|++.|..          +               ..+.+.+.+... |+++.++..
T Consensus       106 ~~g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS~  167 (271)
T 3v2g_A          106 ALG-GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGSN  167 (271)
T ss_dssp             HHS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCG
T ss_pred             HcC-CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeCh
Confidence             12 699999988731          1               233445556666 899998754

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.52  E-value=0.01  Score=51.56  Aligned_cols=79  Identities=19%  Similarity=0.217  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh---cCCce---EeCCCCCCchhHHHHHHh-hhCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA---FGMTD---FINPDDEPNKSISELVKG-ITHGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~---lga~~---v~~~~~~~~~~~~~~i~~-~~~g~  221 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++...+.+++   .+...   ..|-.+   .+....+.+ .....
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLAD---LEGAANVAEELAATR  105 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTC---HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCC---HHHHHHHHHHHHhcC
Confidence            5789999987 9999999999999999 99999976544444433   33221   123333   332222222 11112


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|++.|.
T Consensus       106 ~iD~lv~nAg~  116 (273)
T 3uf0_A          106 RVDVLVNNAGI  116 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999998874

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.52  E-value=0.018  Score=49.75  Aligned_cols=104  Identities=21%  Similarity=0.280  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      ..++++||+|+ +++|.++++.+...|+ +|+.+ .+++++.+.+    ++.+... .  .|-.+  ..+..+.+++.. 
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  101 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD--PAAVRRLFATAEE  101 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            35789999987 9999999999888999 88876 4455444433    3344322 1  23333  122333232221 


Q ss_pred             -CCCCccEEEEcCCCh----------H---------------HHHHHHHhhccCCeEEEEEccCC
Q 019822          219 -HGMGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       219 -~g~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                       -+ ++|++|++.|..          +               ..+.+++.+..+ |+++.++...
T Consensus       102 ~~g-~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS~~  164 (267)
T 3u5t_A          102 AFG-GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMSTSQ  164 (267)
T ss_dssp             HHS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCTH
T ss_pred             HcC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeChh
Confidence             12 699999988731          1               223445566676 8999987543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.52  E-value=0.0097  Score=49.77  Aligned_cols=97  Identities=15%  Similarity=0.227  Sum_probs=61.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      .+|||+|+ |.+|..+++.+...|. +|+++++++++.+.+. .+. .++..+-   .+ .+.+.+...  ++|+||++.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~-~~~~~Dl---~d-~~~~~~~~~--~~d~vi~~a   75 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHL-KVKKADV---SS-LDEVCEVCK--GADAVISAF   75 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTE-EEECCCT---TC-HHHHHHHHT--TCSEEEECC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-Cce-EEEEecC---CC-HHHHHHHhc--CCCEEEEeC
Confidence            58999997 9999999999999998 9999999877653321 111 2222221   11 223444333  599999998


Q ss_pred             CCh-----------HHHHHHHHhhccC-CeEEEEEccCC
Q 019822          231 GVP-----------SLLSEALETTKVG-KGKVIVIGVGV  257 (335)
Q Consensus       231 g~~-----------~~~~~~~~~l~~~-~G~~v~~g~~~  257 (335)
                      +..           .....+++.+... -.+++.++...
T Consensus        76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           76 NPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             CC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            753           1223445555443 14888887644

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.52  E-value=0.012  Score=50.99  Aligned_cols=104  Identities=21%  Similarity=0.243  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHhcCCce-E--eCCCCCCchhHHHHHHhhh-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEK----GKAFGMTD-F--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~----~~~lga~~-v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      -.++++||+|+ +++|.++++.+...|+ +|+++++ ++++.+.    +++.+... .  .|-.+  ..+..+.+++.. 
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   92 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ--VPEIVKLFDQAVA   92 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            35789999987 9999999999999999 8888654 4444333    23445332 2  23332  122333333221 


Q ss_pred             -CCCCccEEEEcCCCh----------H---------------HHHHHHHhhccCCeEEEEEccCC
Q 019822          219 -HGMGVDYCFECTGVP----------S---------------LLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       219 -~g~g~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                       -+ ++|++|++.|..          +               ..+.+++.+.++ |+++.++...
T Consensus        93 ~~g-~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           93 HFG-HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             HHS-CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             HcC-CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence             12 699999988741          1               234455666676 9999998755

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.51  E-value=0.015  Score=49.74  Aligned_cols=73  Identities=21%  Similarity=0.186  Sum_probs=51.1

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEe-CCCCCCchhHHHHHHhhhCCCCccE
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      ...++++||+|+ |.+|.++++.+...|+ +|++++++++..   ++++....+ |- .   .+....+++..   ++|+
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~---~~~~~~~~~~D~-~---~~~~~~~~~~~---~iD~   84 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDL-R---KDLDLLFEKVK---EVDI   84 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCT-T---TCHHHHHHHSC---CCSE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH---HhhCCeEEEeeH-H---HHHHHHHHHhc---CCCE
Confidence            456789999987 9999999999988999 999999887443   344422222 22 1   23444444432   7999


Q ss_pred             EEEcCC
Q 019822          226 CFECTG  231 (335)
Q Consensus       226 vid~~g  231 (335)
                      +|++.|
T Consensus        85 lv~~Ag   90 (249)
T 1o5i_A           85 LVLNAG   90 (249)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.51  E-value=0.011  Score=50.95  Aligned_cols=77  Identities=21%  Similarity=0.228  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC-c-eE--eCCCCCCchhHHHHHH---hh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM-T-DF--INPDDEPNKSISELVK---GI  217 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga-~-~v--~~~~~~~~~~~~~~i~---~~  217 (335)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+. . ..  .|-.+  ..+..+.++   +.
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD--RAQCDALAGRAVEE   85 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5788999987 9999999999999999 999999998876554    23331 1 12  23332  122322222   22


Q ss_pred             hCCCCccEEEEcCC
Q 019822          218 THGMGVDYCFECTG  231 (335)
Q Consensus       218 ~~g~g~d~vid~~g  231 (335)
                      . + ++|++|++.|
T Consensus        86 ~-g-~id~lvnnAg   97 (262)
T 3pk0_A           86 F-G-GIDVVCANAG   97 (262)
T ss_dssp             H-S-CCSEEEECCC
T ss_pred             h-C-CCCEEEECCC
Confidence            2 2 6999999887

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.51  E-value=0.0051  Score=52.08  Aligned_cols=97  Identities=14%  Similarity=0.099  Sum_probs=63.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ++|||+|+ |.+|.++++.+...| + +|+++++++++.+.+...+...+ .|..+   .   +.+++...  ++|+||+
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d---~---~~~~~~~~--~~D~vv~   94 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQIIMGDVLN---H---AALKQAMQ--GQDIVYA   94 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEEEECCTTC---H---HHHHHHHT--TCSEEEE
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEEEEecCCC---H---HHHHHHhc--CCCEEEE
Confidence            57999987 999999999999999 7 99999998876543322222221 23332   2   23334333  5899999


Q ss_pred             cCCChHH---HHHHHHhhccC-CeEEEEEccCC
Q 019822          229 CTGVPSL---LSEALETTKVG-KGKVIVIGVGV  257 (335)
Q Consensus       229 ~~g~~~~---~~~~~~~l~~~-~G~~v~~g~~~  257 (335)
                      +.+....   .+.+++.+... .+++|.++...
T Consensus        95 ~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           95 NLTGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             ECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             cCCCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            8886432   23455555443 25899887644

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.50  E-value=0.0081  Score=51.01  Aligned_cols=79  Identities=18%  Similarity=0.253  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-----cCCc-eE--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-----FGMT-DF--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-----lga~-~v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+     .+.. ..  .|-.+  ...+.+.+++..  
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS--EESINKAFEEIYNL   82 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence            4678999987 9999999999988999 99999998877655422     2432 12  23332  123333333221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -+ ++|++|++.|.
T Consensus        83 ~~-~~d~vi~~Ag~   95 (248)
T 2pnf_A           83 VD-GIDILVNNAGI   95 (248)
T ss_dssp             SS-CCSEEEECCCC
T ss_pred             cC-CCCEEEECCCC
Confidence            12 69999998873

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.50  E-value=0.0084  Score=50.29  Aligned_cols=101  Identities=16%  Similarity=0.043  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcC-----CCEEEEEcCChhhHHHHHhc----C-----C--ceEeCCCCCCchh-
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHG-----AAKIIGIDKNPWKKEKGKAF----G-----M--TDFINPDDEPNKS-  209 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G-----~~~V~~~~~~~~~~~~~~~l----g-----a--~~v~~~~~~~~~~-  209 (335)
                      .+.++.+||-+|+|. |..++.+++..+     ..+|++++.+++..+.+++.    +     .  -.++..+.   .. 
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~---~~~  152 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI---YQV  152 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG---GGC
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh---Hhc
Confidence            578899999999876 888899998876     12999999999888776542    3     1  12222221   11 


Q ss_pred             HHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          210 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       210 ~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      +....   .....||+|+........+..+.+.|+++ |+++..-.
T Consensus       153 ~~~~~---~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  194 (227)
T 2pbf_A          153 NEEEK---KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPIE  194 (227)
T ss_dssp             CHHHH---HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccC---ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEc
Confidence            10000   11237999997666555678899999997 98877643

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.50  E-value=0.016  Score=50.60  Aligned_cols=80  Identities=13%  Similarity=0.228  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---GMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---ga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .+++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+ +++   +... .  .|-.+  ..+..+.+++..  
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSD--ELQMRNAVRDLVLK  102 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            35788999987 9999999999999999 999999998876654 222   3221 2  23332  122333333221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|++|++.|.
T Consensus       103 ~g-~iD~lVnnAg~  115 (283)
T 3v8b_A          103 FG-HLDIVVANAGI  115 (283)
T ss_dssp             HS-CCCEEEECCCC
T ss_pred             hC-CCCEEEECCCC
Confidence            13 69999998873

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.50  E-value=0.0073  Score=52.17  Aligned_cols=79  Identities=19%  Similarity=0.278  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++.. ..  .|-.+  ..+..+.+++..  -+ +
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g-~   80 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFG-R   80 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHS-C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHHcC-C
Confidence            4678999987 9999999999999999 999999998877665 444321 11  23332  122333333221  12 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|++.|.
T Consensus        81 iD~lvnnAg~   90 (263)
T 2a4k_A           81 LHGVAHFAGV   90 (263)
T ss_dssp             CCEEEEGGGG
T ss_pred             CcEEEECCCC
Confidence            8999998863

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.49  E-value=0.0096  Score=51.20  Aligned_cols=78  Identities=23%  Similarity=0.324  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHH-Hhc----CCce-Ee--CCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-KEKG-KAF----GMTD-FI--NPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~-~~~~-~~l----ga~~-v~--~~~~~~~~~~~~~i~~~~-  218 (335)
                      +++++||+|+ |++|.++++.+...|+ +|+++++++++ .+.+ +++    +... .+  |-.+  ..++.+.+++.. 
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~   79 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK--GEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 99999988776 4443 222    4322 22  3332  122333333221 


Q ss_pred             -CCCCccEEEEcCC
Q 019822          219 -HGMGVDYCFECTG  231 (335)
Q Consensus       219 -~g~g~d~vid~~g  231 (335)
                       -+ ++|++|++.|
T Consensus        80 ~~g-~iD~lv~~Ag   92 (260)
T 1x1t_A           80 QMG-RIDILVNNAG   92 (260)
T ss_dssp             HHS-CCSEEEECCC
T ss_pred             hcC-CCCEEEECCC
Confidence             12 6999999887

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.49  E-value=0.0057  Score=52.54  Aligned_cols=78  Identities=21%  Similarity=0.335  Sum_probs=47.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHH---hhhCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVK---GITHGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~---~~~~g~  221 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+ ++++.. ..  .|-.+  ..+..+.++   +.. + 
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~-g-   80 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTN--EADATAALAFAKQEF-G-   80 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTC--HHHHHHHHHHHHHHH-S-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHHc-C-
Confidence            5688999987 9999999999999999 999999988776554 444422 12  23332  122333332   222 2 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|++.|.
T Consensus        81 ~id~lv~nAg~   91 (257)
T 3tpc_A           81 HVHGLVNCAGT   91 (257)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.49  E-value=0.009  Score=51.69  Aligned_cols=79  Identities=22%  Similarity=0.317  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+...   ..|-.+  ..+..+.+++..  -
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD--RHSVAAFAQAAVDTW   79 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 9999999999999999 999999998876654    2334322   123333  122333332221  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|++.|.
T Consensus        80 g-~iD~lVnnAG~   91 (264)
T 3tfo_A           80 G-RIDVLVNNAGV   91 (264)
T ss_dssp             S-CCCEEEECCCC
T ss_pred             C-CCCEEEECCCC
Confidence            3 69999998873

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.48  E-value=0.014  Score=51.74  Aligned_cols=89  Identities=24%  Similarity=0.334  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +.+.++|+..+    +     +.+.++      ..|+|+.+
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~----~-----l~ell~------~aDvV~l~  203 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV----D-----LETLLK------ESDVVTIH  203 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC----C-----HHHHHH------HCSEEEEC
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc----C-----HHHHHh------hCCEEEEe
Confidence            57899999999999999999999999 99999988876 55667776421    2     222222      47999988


Q ss_pred             CCChH----HH-HHHHHhhccCCeEEEEEccC
Q 019822          230 TGVPS----LL-SEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       230 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +...+    .+ ...++.++++ +.++.++..
T Consensus       204 ~p~~~~t~~li~~~~l~~mk~g-a~lin~arg  234 (307)
T 1wwk_A          204 VPLVESTYHLINEERLKLMKKT-AILINTSRG  234 (307)
T ss_dssp             CCCSTTTTTCBCHHHHHHSCTT-CEEEECSCG
T ss_pred             cCCChHHhhhcCHHHHhcCCCC-eEEEECCCC
Confidence            76421    22 3567788887 888888764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.48  E-value=0.0079  Score=52.44  Aligned_cols=80  Identities=14%  Similarity=0.224  Sum_probs=51.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      ..++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+... .  .|-.+  ..+..+.+++..  
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~   98 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS--TDEVHAAVAAAVER   98 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            35789999987 9999999999988999 999999998876554    2334322 1  23332  122322332221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -+ ++|++|++.|.
T Consensus        99 ~g-~id~lv~nAg~  111 (279)
T 3sju_A           99 FG-PIGILVNSAGR  111 (279)
T ss_dssp             HC-SCCEEEECCCC
T ss_pred             cC-CCcEEEECCCC
Confidence            12 69999998874

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.47  E-value=0.015  Score=50.59  Aligned_cols=77  Identities=19%  Similarity=0.233  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce-E--eCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD-F--INPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~-v--~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+ ++++... .  .|-.+  ..+..+.+++...-.++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTS--EDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHTTSSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHhCCCC
Confidence            5678999987 9999999999999999 999999998887665 4455322 2  23332  233333333332222689


Q ss_pred             EEEEc
Q 019822          225 YCFEC  229 (335)
Q Consensus       225 ~vid~  229 (335)
                      +++.+
T Consensus       106 ~lv~~  110 (281)
T 3ppi_A          106 YAVVA  110 (281)
T ss_dssp             EEEEC
T ss_pred             eEEEc
Confidence            99987

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.47  E-value=0.0084  Score=52.07  Aligned_cols=79  Identities=19%  Similarity=0.297  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-Ee--CCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-FI--NPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+... .+  |-.+  ..+..+.+++..  .
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTS--ESEIIEAFARLDEQG  101 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHC
Confidence            5788999987 9999999999999999 999999998876554    2334332 22  3222  122333333221  2


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|++.|.
T Consensus       102 g-~iD~lv~nAg~  113 (271)
T 4ibo_A          102 I-DVDILVNNAGI  113 (271)
T ss_dssp             C-CCCEEEECCCC
T ss_pred             C-CCCEEEECCCC
Confidence            2 69999998873

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.47  E-value=0.012  Score=50.36  Aligned_cols=82  Identities=17%  Similarity=0.144  Sum_probs=52.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----C--Cce-EeCCCCCCchhHHHHHHhhh-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF----G--MTD-FINPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l----g--a~~-v~~~~~~~~~~~~~~i~~~~-  218 (335)
                      -.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++    +  ... ..|-...+..+..+.+++.. 
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            35789999987 9999999999999999 9999999988766542 11    1  111 22331111123333333221 


Q ss_pred             -CCCCccEEEEcCCC
Q 019822          219 -HGMGVDYCFECTGV  232 (335)
Q Consensus       219 -~g~g~d~vid~~g~  232 (335)
                       .+ ++|++|++.|.
T Consensus        89 ~~g-~id~lv~nAg~  102 (252)
T 3f1l_A           89 NYP-RLDGVLHNAGL  102 (252)
T ss_dssp             HCS-CCSEEEECCCC
T ss_pred             hCC-CCCEEEECCcc
Confidence             13 69999998874

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.46  E-value=0.012  Score=51.43  Aligned_cols=78  Identities=17%  Similarity=0.213  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hc----CCc-eE--eCCCCCCchhHHHHHH---hh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AF----GMT-DF--INPDDEPNKSISELVK---GI  217 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~l----ga~-~v--~~~~~~~~~~~~~~i~---~~  217 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++    +.. ..  .|-.+  ..+..+.++   +.
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  108 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD--PDQVAALFAAVRAE  108 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5788999987 9999999999999999 9999999988766542 22    211 22  23333  122333332   22


Q ss_pred             hCCCCccEEEEcCCC
Q 019822          218 THGMGVDYCFECTGV  232 (335)
Q Consensus       218 ~~g~g~d~vid~~g~  232 (335)
                      . + ++|++|++.|.
T Consensus       109 ~-g-~iD~lvnnAG~  121 (281)
T 4dry_A          109 F-A-RLDLLVNNAGS  121 (281)
T ss_dssp             H-S-CCSEEEECCCC
T ss_pred             c-C-CCCEEEECCCC
Confidence            2 3 69999998874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.46  E-value=0.0081  Score=51.78  Aligned_cols=80  Identities=20%  Similarity=0.248  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      ..++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+... +  .|-.+  ..+..+.+++..  
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~  103 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH--SDAIAAFATGVLAA  103 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC--HHHHHHHHHHHHHh
Confidence            35789999987 9999999999988999 999999998876654    2334321 2  23332  122333332221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ .+|++|++.|.
T Consensus       104 ~g-~id~lv~~Ag~  116 (262)
T 3rkr_A          104 HG-RCDVLVNNAGV  116 (262)
T ss_dssp             HS-CCSEEEECCCC
T ss_pred             cC-CCCEEEECCCc
Confidence            13 69999998874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.46  E-value=0.0097  Score=51.78  Aligned_cols=80  Identities=19%  Similarity=0.140  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.+... .  .|-.+  ..+....+++.....
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE--AGAGTDLIERAEAIA  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS--TTHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC--HHHHHHHHHHHHHhC
Confidence            5789999987 9999999999999999 999999988765543    2234321 1  23322  122333333221112


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|++|++.|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.46  E-value=0.015  Score=50.99  Aligned_cols=79  Identities=16%  Similarity=0.212  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC-c-e--EeCCCCCCc-hh---HHHHHH
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM-T-D--FINPDDEPN-KS---ISELVK  215 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga-~-~--v~~~~~~~~-~~---~~~~i~  215 (335)
                      ..++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+. . .  ..|-.+  . ..   +.+.+.
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~v~~~~~~~~   86 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD--PIATMSSLADFIK   86 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS--CHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC--cHHHHHHHHHHHH
Confidence            35788999987 9999999999988999 999999998876543    22221 1 1  133333  1 11   222333


Q ss_pred             hhhCCCCccEEEEcCCC
Q 019822          216 GITHGMGVDYCFECTGV  232 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~  232 (335)
                      +.. + ++|++|++.|.
T Consensus        87 ~~~-g-~iD~lv~nAg~  101 (311)
T 3o26_A           87 THF-G-KLDILVNNAGV  101 (311)
T ss_dssp             HHH-S-SCCEEEECCCC
T ss_pred             HhC-C-CCCEEEECCcc
Confidence            322 2 69999999884

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.45  E-value=0.013  Score=48.57  Aligned_cols=97  Identities=15%  Similarity=0.118  Sum_probs=68.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE--eCCCCCCchhHHHHHHhhhCCCCc
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF--INPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v--~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      ....++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.+...+  +..+-   .       ++.....+
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~---~-------~~~~~~~~  108 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDL---F-------DWTPDRQW  108 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCT---T-------SCCCSSCE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccc---c-------cCCCCCce
Confidence            3467888999999875 7777777777 77 99999999999999987663222  21211   1       11223489


Q ss_pred             cEEEEcCCC--------hHHHHHHHHhhccCCeEEEEEccC
Q 019822          224 DYCFECTGV--------PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       224 d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      |+|+....-        ...+..+.+.|+++ |+++.....
T Consensus       109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  148 (218)
T 3ou2_A          109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVT  148 (218)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred             eEEEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence            999964321        34678888999997 998887654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.45  E-value=0.013  Score=50.30  Aligned_cols=77  Identities=17%  Similarity=0.125  Sum_probs=50.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--CC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--HG  220 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~g  220 (335)
                      ++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+    ++.+.. ..  .|-.+  ..+..+.+++..  -+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD--RDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHhC
Confidence            468999987 9999999999999999 999999988776543    223422 12  23332  122333333221  13


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                       ++|++|++.|
T Consensus        79 -~id~lv~nAg   88 (256)
T 1geg_A           79 -GFDVIVNNAG   88 (256)
T ss_dssp             -CCCEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6999999886

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.44  E-value=0.015  Score=49.93  Aligned_cols=78  Identities=15%  Similarity=0.164  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC--Cce-EeCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG--MTD-FINPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg--a~~-v~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ +++.  ... ..|-.+  ...+.+.+++..  .+ +
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d--~~~v~~~~~~~~~~~g-~   86 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTK--RASVDAAMQKAIDALG-G   86 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTC--HHHHHHHHHHHHHHHT-C
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC--HHHHHHHHHHHHHHcC-C
Confidence            4688999987 9999999999999999 999999998877655 3332  211 123332  122333332221  12 6


Q ss_pred             ccEEEEcCC
Q 019822          223 VDYCFECTG  231 (335)
Q Consensus       223 ~d~vid~~g  231 (335)
                      +|++|++.|
T Consensus        87 iD~lv~~Ag   95 (263)
T 3ak4_A           87 FDLLCANAG   95 (263)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.44  E-value=0.0075  Score=52.52  Aligned_cols=79  Identities=14%  Similarity=0.175  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+.. ..  .|-.+  ..+..+.+++..  -
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQ--PDQVRGMLDQMTGEL  107 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence            5789999987 9999999999999999 999999988776554    233322 12  23332  122333333221  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|++.|.
T Consensus       108 g-~iD~lvnnAg~  119 (276)
T 3r1i_A          108 G-GIDIAVCNAGI  119 (276)
T ss_dssp             S-CCSEEEECCCC
T ss_pred             C-CCCEEEECCCC
Confidence            2 69999998874

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.44  E-value=0.0069  Score=50.93  Aligned_cols=97  Identities=20%  Similarity=0.251  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCC------CEEEEEcCChhhHHHHHhc----C-------CceEeCCCCCCchh
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGA------AKIIGIDKNPWKKEKGKAF----G-------MTDFINPDDEPNKS  209 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~------~~V~~~~~~~~~~~~~~~l----g-------a~~v~~~~~~~~~~  209 (335)
                      .+.++.+||-+|+|. |..+..+++..+.      .+|++++.+++..+.+++.    +       .-.++..+.     
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-----  154 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG-----  154 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG-----
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc-----
Confidence            478899999999876 8888888887662      3999999999887776442    1       112222221     


Q ss_pred             HHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822          210 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       210 ~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                       ..   .+.....||+|+...........+.+.|+++ |+++..-
T Consensus       155 -~~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  194 (227)
T 1r18_A          155 -RK---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPV  194 (227)
T ss_dssp             -GG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             -cc---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEEE
Confidence             11   1222237999997776655668899999997 9887653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.44  E-value=0.01  Score=50.51  Aligned_cols=75  Identities=9%  Similarity=0.023  Sum_probs=52.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-c--CChhhHHHH-Hhc-CCceEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-D--KNPWKKEKG-KAF-GMTDFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~--~~~~~~~~~-~~l-ga~~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      ++++||+|+ |++|.++++.+...|+ +|+++ +  +++++.+.+ +++ +. .+.+..+  -..+.+.+.+.. + ++|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~--v~~~~~~~~~~~-g-~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQK--PERLVDATLQHG-E-AID   74 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCC--GGGHHHHHGGGS-S-CEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHH--HHHHHHHHHHHc-C-CCC
Confidence            367899987 9999999999999999 99999 6  888777655 344 32 2334333  123444444433 2 699


Q ss_pred             EEEEcCC
Q 019822          225 YCFECTG  231 (335)
Q Consensus       225 ~vid~~g  231 (335)
                      ++|++.|
T Consensus        75 ~lv~~Ag   81 (244)
T 1zmo_A           75 TIVSNDY   81 (244)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.43  E-value=0.014  Score=50.46  Aligned_cols=77  Identities=17%  Similarity=0.142  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hc--CCc-e--EeCCCCCCchhHHHHHHhhhC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K---AF--GMT-D--FINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~---~l--ga~-~--v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ +   +.  +.. .  ..|-.+   ....+.+.+.. 
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~-   83 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT---EQGCQDVIEKY-   83 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTS---HHHHHHHHHHC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCC---HHHHHHHHHhc-
Confidence            5688999987 9999999999999999 999999998776543 2   22  111 1  123333   33333333322 


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|+++++.|.
T Consensus        84 g-~id~lv~nAg~   95 (267)
T 3t4x_A           84 P-KVDILINNLGI   95 (267)
T ss_dssp             C-CCSEEEECCCC
T ss_pred             C-CCCEEEECCCC
Confidence            2 69999998873

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.43  E-value=0.011  Score=51.66  Aligned_cols=71  Identities=15%  Similarity=0.158  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC---ceEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM---TDFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga---~~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      -.+++++|+|+|++|.+++..+...|+.+|+++.++.++.+.+ ++++.   ..+.+..            ++.  .++|
T Consensus       124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~------------~l~--~~aD  189 (281)
T 3o8q_A          124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE------------QLK--QSYD  189 (281)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG------------GCC--SCEE
T ss_pred             ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH------------Hhc--CCCC
Confidence            3678999999999999999988889977999999998886654 44442   1222222            111  3799


Q ss_pred             EEEEcCCCh
Q 019822          225 YCFECTGVP  233 (335)
Q Consensus       225 ~vid~~g~~  233 (335)
                      +||+|++..
T Consensus       190 iIInaTp~g  198 (281)
T 3o8q_A          190 VIINSTSAS  198 (281)
T ss_dssp             EEEECSCCC
T ss_pred             EEEEcCcCC
Confidence            999998754

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.43  E-value=0.0097  Score=51.83  Aligned_cols=97  Identities=14%  Similarity=0.066  Sum_probs=63.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          153 SVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      +|||+|+ |.+|..+++.+... |. +|+++++++++.+.+...+...+ .|..+   .   +.+.+...  ++|+||.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d---~---~~l~~~~~--~~d~vi~~   72 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFN---Q---ESMVEAFK--GMDTVVFI   72 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTC---H---HHHHHHTT--TCSEEEEC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCC---H---HHHHHHHh--CCCEEEEe
Confidence            5899997 99999999998877 88 99999998887655444444322 23333   2   23444443  69999998


Q ss_pred             CCCh-------HHHHHHHHhhccC-CeEEEEEccCCC
Q 019822          230 TGVP-------SLLSEALETTKVG-KGKVIVIGVGVD  258 (335)
Q Consensus       230 ~g~~-------~~~~~~~~~l~~~-~G~~v~~g~~~~  258 (335)
                      .+..       .....+++.+... -++++.++....
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~  109 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD  109 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC
Confidence            8742       1234555555543 147888876543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.43  E-value=0.006  Score=53.10  Aligned_cols=79  Identities=18%  Similarity=0.233  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ ++++.. ..  .|-.+  .......+.+..  .+ +
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g-~   79 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTD--GERIDVVAADVLARYG-R   79 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS-C
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCC--HHHHHHHHHHHHHhCC-C
Confidence            4678999987 9999999999999999 999999998877665 444422 12  23332  122333232221  12 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|++.|.
T Consensus        80 id~lv~~Ag~   89 (281)
T 3m1a_A           80 VDVLVNNAGR   89 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999998873

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.43  E-value=0.018  Score=49.55  Aligned_cols=77  Identities=10%  Similarity=0.266  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc--eE--eCCCCCCchhHHHHHH---
Q 019822          150 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT--DF--INPDDEPNKSISELVK---  215 (335)
Q Consensus       150 ~~~~VlI~G~-g--~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~--~v--~~~~~~~~~~~~~~i~---  215 (335)
                      +++++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.+    ++++..  ..  .|-.+  +.+..+.++   
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   81 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS--DEEVINGFEQIG   81 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC--HHHHHHHHHHHH
Confidence            6889999996 4  799999999999999 999999998776654    334421  22  33332  133333332   


Q ss_pred             hhhCCCCccEEEEcCC
Q 019822          216 GITHGMGVDYCFECTG  231 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g  231 (335)
                      +.. | ++|+++++.|
T Consensus        82 ~~~-G-~iD~lvnnAg   95 (256)
T 4fs3_A           82 KDV-G-NIDGVYHSIA   95 (256)
T ss_dssp             HHH-C-CCSEEEECCC
T ss_pred             HHh-C-CCCEEEeccc
Confidence            333 3 6999999876

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.42  E-value=0.0016  Score=55.80  Aligned_cols=101  Identities=23%  Similarity=0.283  Sum_probs=69.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i  214 (335)
                      +.....+.++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..   .++..+.   .      
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~---~------   96 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA---A------   96 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC---T------
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh---H------
Confidence            44667788999999999876 8888899988888 99999999988777643    3421   1221111   1      


Q ss_pred             HhhhCCCCccEEEEcC------CChHHHHHHHHhhccCCeEEEEEcc
Q 019822          215 KGITHGMGVDYCFECT------GVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                       ++.....||+|+...      .-...+..+.+.|+++ |+++....
T Consensus        97 -~~~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~~  141 (256)
T 1nkv_A           97 -GYVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGEP  141 (256)
T ss_dssp             -TCCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEEE
T ss_pred             -hCCcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEecC
Confidence             111123799998522      2234678888999997 99887643

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.41  E-value=0.014  Score=49.97  Aligned_cols=78  Identities=23%  Similarity=0.368  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+    ++.+.. ..  .|-.+  ..++.+.+++..  .
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   88 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTN--TESVQNAVRSVHEQE   88 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHc
Confidence            4688999987 9999999999988999 999999988765433    233422 12  23332  122333333221  1


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      + ++|++|++.|
T Consensus        89 ~-~id~vi~~Ag   99 (260)
T 3awd_A           89 G-RVDILVACAG   99 (260)
T ss_dssp             S-CCCEEEECCC
T ss_pred             C-CCCEEEECCC
Confidence            2 6999999876

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.41  E-value=0.022  Score=48.68  Aligned_cols=102  Identities=17%  Similarity=0.157  Sum_probs=71.2

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc----eEeCCCCCCchhHHHHHHhh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT----DFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~----~v~~~~~~~~~~~~~~i~~~  217 (335)
                      +.+...+.++.+||-+|+| .|..+..+++..+. +|++++.+++..+.+++....    .++..+.   .+.     ..
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~---~~~-----~~  116 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDI---LTK-----EF  116 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCT---TTC-----CC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcc---ccC-----CC
Confidence            3455667889999999987 58888888887788 999999999999998775422    1221111   000     11


Q ss_pred             hCCCCccEEEEcCCC--------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          218 THGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       218 ~~g~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                       ....+|+|+....-        ...+..+.+.|+++ |+++....
T Consensus       117 -~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  160 (266)
T 3ujc_A          117 -PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY  160 (266)
T ss_dssp             -CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             -CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence             22379999975321        23467888999997 99888754

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.41  E-value=0.011  Score=50.03  Aligned_cols=77  Identities=14%  Similarity=0.246  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ++++||+|+ |.+|.++++.+...|+ +|+++++++++  ..++++...+ .|-.+.....+.+.+.+.. + ++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-g-~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEKDDPKGLVKRALEAL-G-GLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTTSCHHHHHHHHHHHH-T-SCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCchHHHHHHHHHHHHHc-C-CCCEEEE
Confidence            468999987 9999999999999999 99999988776  3344453222 2222200112233333322 2 6999999


Q ss_pred             cCCC
Q 019822          229 CTGV  232 (335)
Q Consensus       229 ~~g~  232 (335)
                      +.|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8873

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.41  E-value=0.011  Score=51.88  Aligned_cols=78  Identities=19%  Similarity=0.227  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---CCc--eE--eCCCCCCchhHHHHHH---hh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---GMT--DF--INPDDEPNKSISELVK---GI  217 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---ga~--~v--~~~~~~~~~~~~~~i~---~~  217 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ +++   +..  ..  .|-.+  ..+..+.++   +.
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~  116 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD--PGSCADAARTVVDA  116 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC--HHHHHHHHHHHHHH
Confidence            5788999987 9999999999999999 999999998776554 222   311  11  23332  122222222   22


Q ss_pred             hCCCCccEEEEcCCC
Q 019822          218 THGMGVDYCFECTGV  232 (335)
Q Consensus       218 ~~g~g~d~vid~~g~  232 (335)
                      . + ++|++|++.|.
T Consensus       117 ~-g-~iD~lvnnAg~  129 (293)
T 3rih_A          117 F-G-ALDVVCANAGI  129 (293)
T ss_dssp             H-S-CCCEEEECCCC
T ss_pred             c-C-CCCEEEECCCC
Confidence            2 2 69999998873

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.41  E-value=0.0098  Score=51.32  Aligned_cols=80  Identities=16%  Similarity=0.164  Sum_probs=53.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      -.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+... .  .|-.+  ..+..+.+++..  
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   85 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD--DAQVAHLVDETMKA   85 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            46789999987 9999999999999999 999999998876654    2234322 2  23333  122333333221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|++|++.|.
T Consensus        86 ~g-~id~lv~nAg~   98 (264)
T 3ucx_A           86 YG-RVDVVINNAFR   98 (264)
T ss_dssp             TS-CCSEEEECCCS
T ss_pred             cC-CCcEEEECCCC
Confidence            13 69999998854

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.40  E-value=0.0077  Score=51.06  Aligned_cols=80  Identities=23%  Similarity=0.285  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHhc-CCc-eE--eCCCCCCchhHHHHHHhh---hC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHG--AAKIIGIDKNPWKKEKGKAF-GMT-DF--INPDDEPNKSISELVKGI---TH  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G--~~~V~~~~~~~~~~~~~~~l-ga~-~v--~~~~~~~~~~~~~~i~~~---~~  219 (335)
                      +++++||+|+ |.+|.++++.+...|  + +|+++++++++.+.++++ +.. ..  .|-.+  .....+.+++.   .+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTC--DKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTC--HHHHHHHHHHHHHHHG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCC--HHHHHHHHHHHHHhcC
Confidence            3578999987 999999999998899  8 999999998887777655 221 12  23332  12232333322   22


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      ..++|++|++.|.
T Consensus        79 ~~~id~li~~Ag~   91 (250)
T 1yo6_A           79 SDGLSLLINNAGV   91 (250)
T ss_dssp             GGCCCEEEECCCC
T ss_pred             CCCCcEEEECCcc
Confidence            1269999998863

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.39  E-value=0.012  Score=55.19  Aligned_cols=92  Identities=24%  Similarity=0.328  Sum_probs=67.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      .-.+++|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|.. +.   +     +    .+...  ..|+|+
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~~---~-----l----~ell~--~aDiVi  317 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV---T-----L----DEIVD--KGDFFI  317 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC---C-----H----HHHTT--TCSEEE
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-ec---C-----H----HHHHh--cCCEEE
Confidence            4578999999999999999999999999 999999998775445555652 11   1     2    22222  579999


Q ss_pred             EcCCChHHH-HHHHHhhccCCeEEEEEccC
Q 019822          228 ECTGVPSLL-SEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       228 d~~g~~~~~-~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .+.+....+ ...++.++++ ..++.++..
T Consensus       318 ~~~~t~~lI~~~~l~~MK~g-ailiNvgrg  346 (479)
T 1v8b_A          318 TCTGNVDVIKLEHLLKMKNN-AVVGNIGHF  346 (479)
T ss_dssp             ECCSSSSSBCHHHHTTCCTT-CEEEECSST
T ss_pred             ECCChhhhcCHHHHhhcCCC-cEEEEeCCC
Confidence            887665444 3667778886 788877754

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.39  E-value=0.058  Score=48.95  Aligned_cols=114  Identities=14%  Similarity=0.137  Sum_probs=74.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC----hhh---------HHHHHhcCCceEeCCCCCCchhHHHHH
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN----PWK---------KEKGKAFGMTDFINPDDEPNKSISELV  214 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~----~~~---------~~~~~~lga~~v~~~~~~~~~~~~~~i  214 (335)
                      --++.+|+|+|+|..|..+++++..+|+++|++++++    .++         .+++++...   . ...   .++.+.+
T Consensus       189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~---~-~~~---~~L~eav  261 (388)
T 1vl6_A          189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP---E-RLS---GDLETAL  261 (388)
T ss_dssp             CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT---T-CCC---SCHHHHH
T ss_pred             CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc---c-Cch---hhHHHHH
Confidence            3467899999999999999999999999899999987    544         334444321   0 111   3344444


Q ss_pred             HhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEe
Q 019822          215 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT  278 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~  278 (335)
                      +      ++|++|-+++..-.-++.++.++++ -.++.++.+.   .+..+......+..+..+
T Consensus       262 ~------~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt---~E~~p~~a~~~g~~i~at  315 (388)
T 1vl6_A          262 E------GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV---PEIDPELAREAGAFIVAT  315 (388)
T ss_dssp             T------TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS---CSSCHHHHHHTTCSEEEE
T ss_pred             c------cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC---CCCCHHHHHHhcCeEEEe
Confidence            3      4799998877332235777888886 7777776654   245555554344344443

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.39  E-value=0.0047  Score=52.18  Aligned_cols=101  Identities=18%  Similarity=0.130  Sum_probs=66.8

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--ce--EeCCCCCCchhHHHHHHhhhCC
Q 019822          145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TD--FINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga--~~--v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      ...+.++++||-+|+|+ |..+..+++..|..+|++++.+++..+.+++...  ..  .+..+.   .... .. .... 
T Consensus        69 ~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~---~~~~-~~-~~~~-  141 (230)
T 1fbn_A           69 VMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDA---NKPQ-EY-ANIV-  141 (230)
T ss_dssp             CCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCT---TCGG-GG-TTTS-
T ss_pred             ccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCC---CCcc-cc-cccC-
Confidence            34567889999999876 8888899988874499999999988877654321  11  111111   1100 00 0112 


Q ss_pred             CCccEEEEcCCCh----HHHHHHHHhhccCCeEEEEE
Q 019822          221 MGVDYCFECTGVP----SLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       221 ~g~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ..+|+|+..+..+    ..+..+.+.|+++ |+++..
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            3799999655443    3478888999997 998886

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.38  E-value=0.019  Score=51.05  Aligned_cols=90  Identities=18%  Similarity=0.239  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      -.+++|.|+|.|.+|...++.++..|+ +|++.++++++. .++++|+..+    +     +.+.++      ..|+|+.
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~----~-----l~ell~------~aDvVvl  202 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKAV----S-----LEELLK------NSDVISL  202 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEEC----C-----HHHHHH------HCSEEEE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCceec----C-----HHHHHh------hCCEEEE
Confidence            467899999999999999999999999 999999887764 4567776421    2     222222      4799998


Q ss_pred             cCCChH----HH-HHHHHhhccCCeEEEEEccC
Q 019822          229 CTGVPS----LL-SEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       229 ~~g~~~----~~-~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ++...+    .+ ...++.++++ +.++.++..
T Consensus       203 ~~P~~~~t~~li~~~~l~~mk~g-a~lIn~arg  234 (313)
T 2ekl_A          203 HVTVSKDAKPIIDYPQFELMKDN-VIIVNTSRA  234 (313)
T ss_dssp             CCCCCTTSCCSBCHHHHHHSCTT-EEEEESSCG
T ss_pred             eccCChHHHHhhCHHHHhcCCCC-CEEEECCCC
Confidence            876432    22 4566788886 888877664

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.37  E-value=0.01  Score=51.18  Aligned_cols=79  Identities=23%  Similarity=0.358  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+    ++.+... .  .|-.+  ..+....+.+..  -
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHh
Confidence            4688999987 9999999999999999 999999988776543    2234321 2  23333  122332232221  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|++.|.
T Consensus        83 g-~id~lv~nAg~   94 (262)
T 1zem_A           83 G-KIDFLFNNAGY   94 (262)
T ss_dssp             S-CCCEEEECCCC
T ss_pred             C-CCCEEEECCCC
Confidence            2 69999998863

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.37  E-value=0.012  Score=50.44  Aligned_cols=78  Identities=24%  Similarity=0.257  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHhcCCce-Ee--CCCCCCchhHHHHHHhhh--CCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKGKAFGMTD-FI--NPDDEPNKSISELVKGIT--HGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~--~~~~~~lga~~-v~--~~~~~~~~~~~~~i~~~~--~g~  221 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++  .+.+++.+... .+  |-.+  ..++.+.+++..  -+ 
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~g-   78 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSD--VAQIEALFALAEREFG-   78 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTS--HHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCC--HHHHHHHHHHHHHHcC-
Confidence            4678999987 9999999999999999 99999987651  12233334322 22  3222  122333332211  12 


Q ss_pred             CccEEEEcCC
Q 019822          222 GVDYCFECTG  231 (335)
Q Consensus       222 g~d~vid~~g  231 (335)
                      ++|++|++.|
T Consensus        79 ~id~lv~~Ag   88 (255)
T 2q2v_A           79 GVDILVNNAG   88 (255)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999887

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.37  E-value=0.012  Score=50.76  Aligned_cols=78  Identities=12%  Similarity=0.131  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHhcCCceE-eCCCCCCchhHHHHHHhhh--CCCCcc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMTDF-INPDDEPNKSISELVKGIT--HGMGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~--~g~g~d  224 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++. +.+++.+...+ .|-.+  ..+..+.+++..  .+ ++|
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g-~iD  101 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSC--ETGIMAFIDLLKTQTS-SLR  101 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTS--HHHHHHHHHHHHHHCS-CCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCC--HHHHHHHHHHHHHhcC-CCC
Confidence            4678999987 9999999999988999 899999887654 34455564332 23332  122333333221  13 699


Q ss_pred             EEEEcCC
Q 019822          225 YCFECTG  231 (335)
Q Consensus       225 ~vid~~g  231 (335)
                      ++|++.|
T Consensus       102 ~lv~nAg  108 (260)
T 3gem_A          102 AVVHNAS  108 (260)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.36  E-value=0.013  Score=50.38  Aligned_cols=78  Identities=17%  Similarity=0.149  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHH---hhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVK---GIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~---~~~  218 (335)
                      .++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+... .  .|-.+  ..+..+.++   +..
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTD--EQHREAVIKAALDQF   87 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHHc
Confidence            5789999987 9999999999888999 999999998776554    2334322 1  23332  122222222   222


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                       + ++|++|++.|.
T Consensus        88 -g-~id~lv~nAg~   99 (256)
T 3gaf_A           88 -G-KITVLVNNAGG   99 (256)
T ss_dssp             -S-CCCEEEECCCC
T ss_pred             -C-CCCEEEECCCC
Confidence             2 69999998873

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.35  E-value=0.013  Score=49.78  Aligned_cols=81  Identities=20%  Similarity=0.261  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC--ceE--eCCCCCCchhHHHHHH---h
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM--TDF--INPDDEPNKSISELVK---G  216 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga--~~v--~~~~~~~~~~~~~~i~---~  216 (335)
                      -.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+    ++.+.  ..+  ++-+..+..+..+.++   +
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            35789999987 9999999999999999 999999998877654    22331  112  2221111122222222   2


Q ss_pred             hhCCCCccEEEEcCCC
Q 019822          217 ITHGMGVDYCFECTGV  232 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~  232 (335)
                      .. + ++|++|++.|.
T Consensus        91 ~~-g-~id~lv~nAg~  104 (247)
T 3i1j_A           91 EF-G-RLDGLLHNASI  104 (247)
T ss_dssp             HH-S-CCSEEEECCCC
T ss_pred             hC-C-CCCEEEECCcc
Confidence            22 2 69999998873

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.35  E-value=0.01  Score=50.85  Aligned_cols=76  Identities=16%  Similarity=0.073  Sum_probs=50.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH---hcCCce-EeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK---AFGMTD-FINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~---~lga~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      +++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.   +.+... .++..+  -..+.+.+.+.. + ++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~--v~~~~~~~~~~~-g-~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE--PAELIEAVTSAY-G-QVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS--HHHHHHHHHHHH-S-CCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEECHHH--HHHHHHHHHHHh-C-CCCEE
Confidence            46899987 9999999999999999 9999999887765543   224322 223322  122333333333 2 69999


Q ss_pred             EEcCCC
Q 019822          227 FECTGV  232 (335)
Q Consensus       227 id~~g~  232 (335)
                      |++.|.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            998773

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.34  E-value=0.0084  Score=50.71  Aligned_cols=106  Identities=20%  Similarity=0.239  Sum_probs=68.8

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      ....++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++    .|...-+....   .+..+.+.++...
T Consensus        68 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~l~~l~~~  143 (232)
T 3cbg_A           68 ISLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRL---GPALATLEQLTQG  143 (232)
T ss_dssp             HHHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHHHHHHTS
T ss_pred             HHhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHhc
Confidence            344567899999987 5888999998774 2399999999988777654    34321111111   2333444444321


Q ss_pred             ---CCccEEE-EcCCC--hHHHHHHHHhhccCCeEEEEEccC
Q 019822          221 ---MGVDYCF-ECTGV--PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       221 ---~g~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                         ..||+|| |....  ...++.+.+.|+++ |.++.-...
T Consensus       144 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~~  184 (232)
T 3cbg_A          144 KPLPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDNVL  184 (232)
T ss_dssp             SSCCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEECTT
T ss_pred             CCCCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeCCC
Confidence               3799998 43321  34578889999997 998876443

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.34  E-value=0.0063  Score=52.70  Aligned_cols=79  Identities=10%  Similarity=0.088  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhh--CCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGIT--HGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~g~d~  225 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+....... ..|-.+  ..+..+.+++..  -+ ++|+
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g-~iD~   90 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTD--KYTFDTAITRAEKIYG-PADA   90 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTC--HHHHHHHHHHHHHHHC-SEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCC--HHHHHHHHHHHHHHCC-CCCE
Confidence            4688999987 9999999999999999 9999999887765543222111 123332  122333332221  12 6999


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      +|++.|.
T Consensus        91 lvnnAg~   97 (266)
T 3p19_A           91 IVNNAGM   97 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9998874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.34  E-value=0.012  Score=50.52  Aligned_cols=77  Identities=16%  Similarity=0.221  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHH---hhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVK---GIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~---~~~  218 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+    ++.+... .  .|-.+  ..+..+.++   +..
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK--AEDRERLVAMAVNLH   89 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            5788999987 9999999999999999 999999988766543    2234321 1  23332  122322232   222


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                       + ++|++|++.|
T Consensus        90 -g-~iD~lv~~Ag  100 (260)
T 2zat_A           90 -G-GVDILVSNAA  100 (260)
T ss_dssp             -S-CCCEEEECCC
T ss_pred             -C-CCCEEEECCC
Confidence             2 6999999887

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.34  E-value=0.021  Score=49.58  Aligned_cols=92  Identities=15%  Similarity=0.134  Sum_probs=61.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      .+...+++++|+|+|++|.+++..+...|+++|+++.|+.++.+. +++++.. .. . +   .       +   -..+|
T Consensus       114 ~~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~-~-~---~-------~---~~~~D  177 (271)
T 1npy_A          114 YHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YI-N-S---L-------E---NQQAD  177 (271)
T ss_dssp             TTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EE-S-C---C-------T---TCCCS
T ss_pred             hCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cc-h-h---h-------h---cccCC
Confidence            344467799999999999999999999998789999999887554 4566642 11 1 1   0       0   12689


Q ss_pred             EEEEcCCChHH-------HHHHHHhhccCCeEEEEEc
Q 019822          225 YCFECTGVPSL-------LSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       225 ~vid~~g~~~~-------~~~~~~~l~~~~G~~v~~g  254 (335)
                      +||+|++....       .......+.++ ..++++.
T Consensus       178 ivInaTp~gm~~~~~~~~~~~~~~~l~~~-~~v~Dlv  213 (271)
T 1npy_A          178 ILVNVTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVV  213 (271)
T ss_dssp             EEEECSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECC
T ss_pred             EEEECCCCCccCccccCCCCCCHHHcCCC-CEEEEee
Confidence            99999875411       11112445565 5666664

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.33  E-value=0.011  Score=51.24  Aligned_cols=79  Identities=20%  Similarity=0.225  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |.+|.+++..+...|+ +|+++++++++.+.+    ++.+.. ..  .|-.+  .....+.+++..  .
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN--REDIYSSAKKVKAEI  106 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCC--HHHHHHHHHHHHHHC
Confidence            5689999987 9999999999999999 999999988776543    233432 12  23332  122333333221  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|++.|.
T Consensus       107 g-~iD~li~~Ag~  118 (272)
T 1yb1_A          107 G-DVSILVNNAGV  118 (272)
T ss_dssp             C-CCSEEEECCCC
T ss_pred             C-CCcEEEECCCc
Confidence            2 69999998873

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.33  E-value=0.012  Score=50.96  Aligned_cols=78  Identities=19%  Similarity=0.328  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-h----cCCce-E--eCCCCCCchhHHHHH---Hhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-A----FGMTD-F--INPDDEPNKSISELV---KGI  217 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~----lga~~-v--~~~~~~~~~~~~~~i---~~~  217 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+. +    .+... .  .|-.+  ..+..+.+   .+.
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   95 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE--PDAPAELARRAAEA   95 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS--TTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence            5688999987 9999999999999999 9999999988765542 1    34321 1  23332  12333333   332


Q ss_pred             hCCCCccEEEEcCCC
Q 019822          218 THGMGVDYCFECTGV  232 (335)
Q Consensus       218 ~~g~g~d~vid~~g~  232 (335)
                      . + ++|++|++.|.
T Consensus        96 ~-g-~id~lv~nAg~  108 (266)
T 4egf_A           96 F-G-GLDVLVNNAGI  108 (266)
T ss_dssp             H-T-SCSEEEEECCC
T ss_pred             c-C-CCCEEEECCCc
Confidence            2 2 69999998873

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.32  E-value=0.018  Score=50.68  Aligned_cols=79  Identities=20%  Similarity=0.198  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHHH----HHhcCCce---EeCCCCCCch
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN------------PWKKEK----GKAFGMTD---FINPDDEPNK  208 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~------------~~~~~~----~~~lga~~---v~~~~~~~~~  208 (335)
                      -.++++||+|+ +++|.++++.+...|+ +|++++++            +++.+.    +++.+...   ..|-.+  ..
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~  102 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD--FD  102 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC--HH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC--HH
Confidence            35789999987 9999999999999999 99998876            444333    23445322   123332  12


Q ss_pred             hHHHHHHhhh--CCCCccEEEEcCC
Q 019822          209 SISELVKGIT--HGMGVDYCFECTG  231 (335)
Q Consensus       209 ~~~~~i~~~~--~g~g~d~vid~~g  231 (335)
                      +..+.+++..  -+ ++|++|++.|
T Consensus       103 ~v~~~~~~~~~~~g-~iD~lv~nAg  126 (299)
T 3t7c_A          103 AMQAAVDDGVTQLG-RLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHHHHS-CCCEEEECCC
T ss_pred             HHHHHHHHHHHHhC-CCCEEEECCC
Confidence            2333333221  13 6999999877

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.32  E-value=0.025  Score=48.01  Aligned_cols=80  Identities=21%  Similarity=0.310  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh-CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT-HG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~-~g  220 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+    ++.+... .  .|-.+  ..+..+.+++.. ..
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISD--IESIQNFFAEIKAEN   80 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHc
Confidence            4678999987 9999999999999999 999999998776654    3334322 2  23332  233333333321 11


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|++|++.|.
T Consensus        81 ~~id~li~~Ag~   92 (247)
T 3lyl_A           81 LAIDILVNNAGI   92 (247)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999998874

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.32  E-value=0.017  Score=50.44  Aligned_cols=73  Identities=22%  Similarity=0.227  Sum_probs=52.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      +|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+...        .+..+.++      +.|+||-++..
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~------~advvi~~v~~   67 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA--------SSPAEVCA------ACDITIAMLAD   67 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC--------SCHHHHHH------HCSEEEECCSS
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHH------cCCEEEEEcCC
Confidence            68899999999998888888898 99999999999888877775321        11222222      36888888876


Q ss_pred             hHHHHHHH
Q 019822          233 PSLLSEAL  240 (335)
Q Consensus       233 ~~~~~~~~  240 (335)
                      +..+...+
T Consensus        68 ~~~~~~v~   75 (287)
T 3pdu_A           68 PAAAREVC   75 (287)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            54444444

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.32  E-value=0.016  Score=50.20  Aligned_cols=80  Identities=20%  Similarity=0.226  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHHHH----HhcCCce-E--eCCCCCCch
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN------------PWKKEKG----KAFGMTD-F--INPDDEPNK  208 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~------------~~~~~~~----~~lga~~-v--~~~~~~~~~  208 (335)
                      -.++++||+|+ +++|.++++.+...|+ +|++++++            +++.+.+    ++.+... .  .|-.+  ..
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~   87 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD--RE   87 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC--HH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC--HH
Confidence            35789999987 9999999999999999 99999876            4444332    3334322 1  23332  12


Q ss_pred             hHHHHHHhhh--CCCCccEEEEcCCC
Q 019822          209 SISELVKGIT--HGMGVDYCFECTGV  232 (335)
Q Consensus       209 ~~~~~i~~~~--~g~g~d~vid~~g~  232 (335)
                      +..+.+++..  -+ ++|++|++.|.
T Consensus        88 ~v~~~~~~~~~~~g-~id~lv~nAg~  112 (278)
T 3sx2_A           88 SLSAALQAGLDELG-RLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHHHHC-CCCEEEECCCC
T ss_pred             HHHHHHHHHHHHcC-CCCEEEECCCC
Confidence            2333333221  13 69999998874

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.32  E-value=0.0098  Score=51.19  Aligned_cols=79  Identities=19%  Similarity=0.201  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhh---h
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGI---T  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~---~  218 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+    ++.+... .  .|-.+  .....+.+++.   .
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSMF   89 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCC--HHHHHHHHHHHHHHh
Confidence            4678999987 9999999999999999 999999988766543    2234321 2  23332  12222223222   2


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      ++ ++|++|++.|.
T Consensus        90 ~~-~id~li~~Ag~  102 (266)
T 1xq1_A           90 GG-KLDILINNLGA  102 (266)
T ss_dssp             TT-CCSEEEEECCC
T ss_pred             CC-CCcEEEECCCC
Confidence            23 79999998874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.31  E-value=0.012  Score=50.03  Aligned_cols=79  Identities=23%  Similarity=0.291  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ ++++.+.+    ++.+... .  .|-.+  ..+..+.+++..  
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN--AEDVTNMVKQTVDV   79 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 9999988 76665443    2334321 2  23332  123333333221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|++|++.|.
T Consensus        80 ~g-~id~lv~nAg~   92 (246)
T 2uvd_A           80 FG-QVDILVNNAGV   92 (246)
T ss_dssp             HS-CCCEEEECCCC
T ss_pred             cC-CCCEEEECCCC
Confidence            13 69999998873

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.30  E-value=0.023  Score=48.95  Aligned_cols=104  Identities=13%  Similarity=0.075  Sum_probs=66.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH---HhcCCc-e--EeCCCCCCchhHHHHHH---hhhC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG---KAFGMT-D--FINPDDEPNKSISELVK---GITH  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~---~~lga~-~--v~~~~~~~~~~~~~~i~---~~~~  219 (335)
                      +++.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+   ++.+.. .  ..|-.+  +.+..+.+.   +.. 
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~v~~~~~~~-   81 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQD--DAQCRDAVAQTIATF-   81 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC--HHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC--HHHHHHHHHHHHHHh-
Confidence            6789999986 9999999999999999 999999887665443   333422 1  233333  233333332   223 


Q ss_pred             CCCccEEEEcCCCh---------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          220 GMGVDYCFECTGVP---------S---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       220 g~g~d~vid~~g~~---------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      | ++|+++++.|..         +               ..+.+++.+..++|++|-++...+
T Consensus        82 G-~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  143 (258)
T 4gkb_A           82 G-RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA  143 (258)
T ss_dssp             S-CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred             C-CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence            3 699999988741         1               223344555432389999976554

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.29  E-value=0.012  Score=49.98  Aligned_cols=78  Identities=22%  Similarity=0.295  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC---CceE--eCCCCCCchhHHHHHHhhh--CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG---MTDF--INPDDEPNKSISELVKGIT--HG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg---a~~v--~~~~~~~~~~~~~~i~~~~--~g  220 (335)
                      +++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ +++.   ....  .|-.+  ...+.+.+++..  .+
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD--EDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCC--HHHHHHHHHHHHHHhC
Confidence            4678999987 9999999999998999 999999988776554 3332   1122  23332  122333332211  12


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                       ++|++|++.|
T Consensus        82 -~id~li~~Ag   91 (251)
T 1zk4_A           82 -PVSTLVNNAG   91 (251)
T ss_dssp             -SCCEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6999999887

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.29  E-value=0.011  Score=51.86  Aligned_cols=78  Identities=13%  Similarity=0.112  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----ga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+ |.+|.+++..+...|+ +|+++++++++.+.+ +++    +... .  .|-.+  ..++.+.+++..  
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD--PDMVQNTVSELIKV  101 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 999999998776543 222    4321 2  23332  122333333221  


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                      .+ .+|++|++.|
T Consensus       102 ~g-~id~li~~Ag  113 (302)
T 1w6u_A          102 AG-HPNIVINNAA  113 (302)
T ss_dssp             TC-SCSEEEECCC
T ss_pred             cC-CCCEEEECCC
Confidence            13 6899999887

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.28  E-value=0.0062  Score=49.30  Aligned_cols=100  Identities=17%  Similarity=0.198  Sum_probs=66.0

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc--eEeCCCCCCchhHHHHHHhhh
Q 019822          145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT--DFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ...+.++++||-+|+|+ |..+..+++. +. +|++++.+++..+.+++    .+..  .++. .+   .   ..+....
T Consensus        17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~---~---~~l~~~~   86 (185)
T 3mti_A           17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELIL-DG---H---ENLDHYV   86 (185)
T ss_dssp             HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SC---G---GGGGGTC
T ss_pred             HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-Cc---H---HHHHhhc
Confidence            35678899999999875 8888888887 76 99999999988877643    3432  2222 11   1   1122233


Q ss_pred             CCCCccEEEEcCCC---------------hHHHHHHHHhhccCCeEEEEEccC
Q 019822          219 HGMGVDYCFECTGV---------------PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       219 ~g~g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                       ...||+|+...+.               ...+..+.+.|+++ |+++.+...
T Consensus        87 -~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~  137 (185)
T 3mti_A           87 -REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIYY  137 (185)
T ss_dssp             -CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC-
T ss_pred             -cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEeC
Confidence             3379999855321               12457788999997 999877543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.28  E-value=0.024  Score=53.23  Aligned_cols=94  Identities=13%  Similarity=0.085  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHh-cCCce-EeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKA-FGMTD-FINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~-lga~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      ++.+|+|+|+|.+|.+++..+... +. +|++++++.++.+.+.+ .+... .++..+   .+   .+.+...  ++|+|
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d---~~---~l~~~l~--~~DvV   92 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD---DS---ALDKVLA--DNDVV   92 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC---HH---HHHHHHH--TSSEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC---HH---HHHHHHc--CCCEE
Confidence            356899999999999999888877 67 89999999888766543 34322 233332   21   2333222  68999


Q ss_pred             EEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          227 FECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       227 id~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      |+|++..........++..+ -.++..
T Consensus        93 In~tp~~~~~~v~~a~l~~g-~~vvd~  118 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTK-TDVVTS  118 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred             EECCchhhhHHHHHHHHhcC-CEEEEe
Confidence            99998652223344556664 555554

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.28  E-value=0.014  Score=47.10  Aligned_cols=103  Identities=19%  Similarity=0.228  Sum_probs=69.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCC-ceEeCCCCCCchhHHHHHHh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM-TDFINPDDEPNKSISELVKG  216 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga-~~v~~~~~~~~~~~~~~i~~  216 (335)
                      +.......++.+||-+|+|. |..+..+++.. . +|++++.+++..+.+++    .+. ..+ ....   .++...+. 
T Consensus        25 ~~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~-~~~~---~d~~~~~~-   96 (192)
T 1l3i_A           25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNV-TLME---GDAPEALC-   96 (192)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEE---SCHHHHHT-
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcce-EEEe---cCHHHhcc-
Confidence            34556788999999999876 88888888766 5 99999999988877754    343 111 1111   22332222 


Q ss_pred             hhCCCCccEEEEcCC---ChHHHHHHHHhhccCCeEEEEEcc
Q 019822          217 ITHGMGVDYCFECTG---VPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       217 ~~~g~g~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                        ....+|+|+....   -...+..+.+.|+++ |+++....
T Consensus        97 --~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~~  135 (192)
T 1l3i_A           97 --KIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTAI  135 (192)
T ss_dssp             --TSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             --cCCCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEec
Confidence              2127999996543   134677888899997 99887643

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.27  E-value=0.014  Score=49.58  Aligned_cols=77  Identities=14%  Similarity=0.197  Sum_probs=50.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GMT-DF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----ga~-~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      ++++||+|+ |.+|.+++..+...|+ +|+++++++++.+.+ +++    +.. .+  .|-.+  ..++.+.+++..  .
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   78 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVAD--EGDVNAAIAATMEQF   78 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHHh
Confidence            568999987 9999999999988999 999999988776654 222    221 12  23332  122333333221  1


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      + ++|++|++.|
T Consensus        79 ~-~id~li~~Ag   89 (250)
T 2cfc_A           79 G-AIDVLVNNAG   89 (250)
T ss_dssp             S-CCCEEEECCC
T ss_pred             C-CCCEEEECCC
Confidence            2 6999999886

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.27  E-value=0.013  Score=49.15  Aligned_cols=89  Identities=16%  Similarity=0.175  Sum_probs=59.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      .++++||+|+ +++|.+.++.+...|+ +|++++++++             .|-.+  .....+.++++  + ++|++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~--~~~v~~~~~~~--g-~id~lv~   65 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD--EKSVYHYFETI--G-AFDHLIV   65 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC--HHHHHHHHHHH--C-SEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC--HHHHHHHHHHh--C-CCCEEEE
Confidence            4678999987 9999999999988899 9999987654             23222  12233333333  3 6899998


Q ss_pred             cCCCh-----------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          229 CTGVP-----------S---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       229 ~~g~~-----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      +.|..           +               ..+.+.+.+.++ |+++.++....
T Consensus        66 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~~sS~~~  120 (223)
T 3uce_A           66 TAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG-GSITLTSGMLS  120 (223)
T ss_dssp             CCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE-EEEEEECCGGG
T ss_pred             CCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC-eEEEEecchhh
Confidence            87732           0               122334455566 89999876543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.27  E-value=0.022  Score=48.91  Aligned_cols=78  Identities=14%  Similarity=0.138  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCCce-E--eCCCCCCchhHHHHHHhhh---
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KA---FGMTD-F--INPDDEPNKSISELVKGIT---  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~---lga~~-v--~~~~~~~~~~~~~~i~~~~---  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++   .+... .  .|-.+  ..+..+.+++..   
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ--ESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC--HHHHHHHHHHHHHhc
Confidence            4678999987 9999999999999999 999999988776543 22   24221 1  23332  233333333331   


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                      .+ ++|++|++.|
T Consensus        81 ~g-~id~lvnnAg   92 (260)
T 2qq5_A           81 QG-RLDVLVNNAY   92 (260)
T ss_dssp             TT-CCCEEEECCC
T ss_pred             CC-CceEEEECCc
Confidence            23 6999999884

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.27  E-value=0.012  Score=53.14  Aligned_cols=80  Identities=24%  Similarity=0.295  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-----------HHHHHhcCCce---EeCCCCCCchhHHHH
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-----------KEKGKAFGMTD---FINPDDEPNKSISEL  213 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~-----------~~~~~~lga~~---v~~~~~~~~~~~~~~  213 (335)
                      -.++++||+|+ +++|.++++.+...|+ +|+.+++++++           .+.+++.|...   ..|-.+  ..+..+.
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~  119 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD--EQQISAA  119 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHH
Confidence            35789999987 9999999999999999 99999988764           22334455322   134333  1223333


Q ss_pred             HHhhh--CCCCccEEEEcCCC
Q 019822          214 VKGIT--HGMGVDYCFECTGV  232 (335)
Q Consensus       214 i~~~~--~g~g~d~vid~~g~  232 (335)
                      +++..  -+ ++|++|++.|.
T Consensus       120 ~~~~~~~~g-~iDilVnnAG~  139 (346)
T 3kvo_A          120 VEKAIKKFG-GIDILVNNASA  139 (346)
T ss_dssp             HHHHHHHHS-CCCEEEECCCC
T ss_pred             HHHHHHHcC-CCCEEEECCCC
Confidence            33221  13 69999998874

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.27  E-value=0.011  Score=53.69  Aligned_cols=91  Identities=21%  Similarity=0.311  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCE-EEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAK-IIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~-V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -.+++|.|+|.|.+|...++.++.+|+ + |++.+++..+.+.++++|+..+   .     ++.+.++      ..|+|+
T Consensus       162 l~g~tvgIIG~G~IG~~vA~~l~~~G~-~~V~~~d~~~~~~~~~~~~g~~~~---~-----~l~ell~------~aDvV~  226 (364)
T 2j6i_A          162 IEGKTIATIGAGRIGYRVLERLVPFNP-KELLYYDYQALPKDAEEKVGARRV---E-----NIEELVA------QADIVT  226 (364)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCC-SEEEEECSSCCCHHHHHHTTEEEC---S-----SHHHHHH------TCSEEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHhCCC-cEEEEECCCccchhHHHhcCcEec---C-----CHHHHHh------cCCEEE
Confidence            367899999999999999999999999 6 9999988766666666664321   1     1222221      467777


Q ss_pred             EcCCCh----HHH-HHHHHhhccCCeEEEEEcc
Q 019822          228 ECTGVP----SLL-SEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       228 d~~g~~----~~~-~~~~~~l~~~~G~~v~~g~  255 (335)
                      .++...    ..+ ...++.++++ +.++.++.
T Consensus       227 l~~P~t~~t~~li~~~~l~~mk~g-a~lIn~ar  258 (364)
T 2j6i_A          227 VNAPLHAGTKGLINKELLSKFKKG-AWLVNTAR  258 (364)
T ss_dssp             ECCCCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             ECCCCChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence            666542    122 2445666665 66666554

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.26  E-value=0.013  Score=51.05  Aligned_cols=79  Identities=23%  Similarity=0.400  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC---ce-E--eCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM---TD-F--INPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga---~~-v--~~~~~~~~~~~~~~i~~~~  218 (335)
                      .++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+    ++.+.   .. .  .|-.+  ..+..+.+++..
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   86 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN--EDETARAVDAVT   86 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC--HHHHHHHHHHHH
Confidence            5789999987 9999999999999999 999999998776543    33332   11 1  23332  122333333221


Q ss_pred             --CCCCccEEEEcCCC
Q 019822          219 --HGMGVDYCFECTGV  232 (335)
Q Consensus       219 --~g~g~d~vid~~g~  232 (335)
                        .+ ++|+++++.|.
T Consensus        87 ~~~g-~id~lv~nAg~  101 (281)
T 3svt_A           87 AWHG-RLHGVVHCAGG  101 (281)
T ss_dssp             HHHS-CCCEEEECCCC
T ss_pred             HHcC-CCCEEEECCCc
Confidence              13 69999998874

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.26  E-value=0.0088  Score=51.50  Aligned_cols=81  Identities=17%  Similarity=0.265  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcC---CCEEEEEcCChhhHHHHHhc---CCc-eE--eCCCCCCchhHHHHHHh--
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHG---AAKIIGIDKNPWKKEKGKAF---GMT-DF--INPDDEPNKSISELVKG--  216 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G---~~~V~~~~~~~~~~~~~~~l---ga~-~v--~~~~~~~~~~~~~~i~~--  216 (335)
                      .+++++||+|+ |.+|.++++.+...|   + +|++++++.++.+.++++   +.. ..  .|-.+  .....+.+.+  
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~   95 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN--FDAYDKLVADIE   95 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC--GGGHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCC--hHHHHHHHHHHH
Confidence            35678999987 999999999998889   7 999999987654443332   221 12  23322  2333333332  


Q ss_pred             -hhCCCCccEEEEcCCC
Q 019822          217 -ITHGMGVDYCFECTGV  232 (335)
Q Consensus       217 -~~~g~g~d~vid~~g~  232 (335)
                       ..+..++|++|++.|.
T Consensus        96 ~~~g~~~id~li~~Ag~  112 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HHHGGGCCSEEEECCCC
T ss_pred             HhcCCCCccEEEECCCc
Confidence             2222259999998873

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.25  E-value=0.024  Score=48.87  Aligned_cols=78  Identities=14%  Similarity=0.103  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----h-cCCc--eE--eCCCCCCchhHHHHHH---h
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----A-FGMT--DF--INPDDEPNKSISELVK---G  216 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~-lga~--~v--~~~~~~~~~~~~~~i~---~  216 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.    + .+..  ..  .|-.+  ..+..+.++   +
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   83 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD--ALQVRAFAEACER   83 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC--HHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 9999999988765542    2 3322  12  23333  122222222   2


Q ss_pred             hhCCCCccEEEEcCCC
Q 019822          217 ITHGMGVDYCFECTGV  232 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~  232 (335)
                      .. + ++|++|++.|.
T Consensus        84 ~~-g-~id~lvnnAg~   97 (265)
T 3lf2_A           84 TL-G-CASILVNNAGQ   97 (265)
T ss_dssp             HH-C-SCSEEEECCCC
T ss_pred             Hc-C-CCCEEEECCCC
Confidence            22 3 69999998874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.25  E-value=0.032  Score=48.61  Aligned_cols=79  Identities=18%  Similarity=0.214  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH----Hhc-CCc-eEe--CCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAF-GMT-DFI--NPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~l-ga~-~v~--~~~~~~~~~~~~~i~~~~-  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ ++++.+.+    ++. +.. ..+  |-.+  ..+..+.+++.. 
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  100 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK--PSEIADMMAMVAD  100 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC--HHHHHHHHHHHHH
Confidence            4689999987 9999999999999999 9999998 55544433    222 222 122  3222  122333333221 


Q ss_pred             -CCCCccEEEEcCCC
Q 019822          219 -HGMGVDYCFECTGV  232 (335)
Q Consensus       219 -~g~g~d~vid~~g~  232 (335)
                       -+ ++|++|++.|.
T Consensus       101 ~~g-~iD~lv~nAg~  114 (281)
T 3v2h_A          101 RFG-GADILVNNAGV  114 (281)
T ss_dssp             HTS-SCSEEEECCCC
T ss_pred             HCC-CCCEEEECCCC
Confidence             13 69999998874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.24  E-value=0.015  Score=50.64  Aligned_cols=35  Identities=20%  Similarity=0.171  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      -.++++||+|+ +++|.++++.+...|+ +|+.++++
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~   43 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC   43 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence            35789999987 9999999999999999 99999986

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.24  E-value=0.0039  Score=53.00  Aligned_cols=97  Identities=14%  Similarity=0.119  Sum_probs=67.0

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-----eEeCCCCCCchhHHHHHHhhhCCCC
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-----DFINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~-----~v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      ..+|.+||-+|+|. |..+..+++..+. +|++++.+++-.+.+++....     .++.      .++......+..+ .
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~------~~a~~~~~~~~~~-~  128 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK------GLWEDVAPTLPDG-H  128 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE------SCHHHHGGGSCTT-C
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe------ehHHhhccccccc-C
Confidence            46889999999874 7888888887666 999999999988888764321     1221      2233333334333 7


Q ss_pred             ccEEE-EcCCC----------hHHHHHHHHhhccCCeEEEEEc
Q 019822          223 VDYCF-ECTGV----------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       223 ~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ||.|+ |++..          ...+..+.+.|+|+ |+++.+.
T Consensus       129 FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             CceEEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            99884 65532          22467788999998 9998764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.23  E-value=0.02  Score=48.87  Aligned_cols=77  Identities=16%  Similarity=0.223  Sum_probs=51.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc-eE--eCCCCCCchhHHHHHHhhhCC-CCccE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT-DF--INPDDEPNKSISELVKGITHG-MGVDY  225 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~~g-~g~d~  225 (335)
                      +++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++.. ..  .|-.+  ..+..+.+++.... .++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC--HHHHHHHHHHHHHhCCCCCE
Confidence            36888887 9999999999998999 999999998877655 344422 12  23333  23333334333211 16999


Q ss_pred             EEEcCC
Q 019822          226 CFECTG  231 (335)
Q Consensus       226 vid~~g  231 (335)
                      +|++.|
T Consensus        78 lvnnAg   83 (248)
T 3asu_A           78 LVNNAG   83 (248)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.23  E-value=0.032  Score=47.73  Aligned_cols=41  Identities=15%  Similarity=0.150  Sum_probs=35.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      .++++||+|+ |.+|.+++..+...|+ +|+++++++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence            4678999987 9999999999988999 999999998876654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.23  E-value=0.0084  Score=52.02  Aligned_cols=78  Identities=21%  Similarity=0.276  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-e--EeCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-D--FINPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~--v~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+    ++.+.. .  ..|-.+  ..+..+.+++..  -
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND--ATAVDALVESTLKEF  103 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC--HHHHHHHHHHHHHHc
Confidence            5688999987 9999999999999999 999999998776554    233322 1  234333  122333333221  1


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      + ++|++|++.|
T Consensus       104 g-~iD~lvnnAg  114 (270)
T 3ftp_A          104 G-ALNVLVNNAG  114 (270)
T ss_dssp             S-CCCEEEECCC
T ss_pred             C-CCCEEEECCC
Confidence            2 6999999887

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.22  E-value=0.012  Score=49.46  Aligned_cols=101  Identities=22%  Similarity=0.225  Sum_probs=69.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC----ceEeCCCCCCchhHHHHHHhh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM----TDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga----~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      +.+.....++.+||-+|+|. |..+..+++.. . +|++++.+++..+.+++...    ..++..+.      ..   ..
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~------~~---~~  129 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG------TL---GY  129 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG------GG---CC
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc------cc---cc
Confidence            44566788999999999875 88888888764 5 99999999998888765321    12222221      11   11


Q ss_pred             hCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          218 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .....+|+|+....-......+.+.|+++ |+++..-.
T Consensus       130 ~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~  166 (231)
T 1vbf_A          130 EEEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIG  166 (231)
T ss_dssp             GGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             ccCCCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            11237999997655443457888999997 99887744

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.22  E-value=0.01  Score=52.81  Aligned_cols=102  Identities=25%  Similarity=0.261  Sum_probs=69.2

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i  214 (335)
                      +.+...+.++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++    .|...  ++..+      ..+. 
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d------~~~~-  138 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD------GYYG-  138 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC------GGGC-
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECC------hhhc-
Confidence            44667788999999999876 8888888887542 379999999998877754    34322  22111      1100 


Q ss_pred             HhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822          215 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                        ......+|+|+.........+.+.+.|+++ |+++..-
T Consensus       139 --~~~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~  175 (317)
T 1dl5_A          139 --VPEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI  175 (317)
T ss_dssp             --CGGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred             --cccCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence              111237999997655443447788899997 9987764

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.22  E-value=0.018  Score=48.21  Aligned_cols=97  Identities=22%  Similarity=0.266  Sum_probs=66.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cC-----Cc--eEeCCCCCCchhHHHHHH
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FG-----MT--DFINPDDEPNKSISELVK  215 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg-----a~--~v~~~~~~~~~~~~~~i~  215 (335)
                      +.++.+||-+|+|+ |..+..+++..|. .+|++++.+++..+.+++    .+     ..  .++..+.      .   .
T Consensus        75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~------~---~  144 (226)
T 1i1n_A           75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG------R---M  144 (226)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG------G---G
T ss_pred             CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc------c---c
Confidence            77899999999875 8888888888763 299999999988877643    22     11  1221111      0   0


Q ss_pred             hhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          216 GITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .......||+|+........+..+.+.|+++ |+++..-.
T Consensus       145 ~~~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  183 (226)
T 1i1n_A          145 GYAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPVG  183 (226)
T ss_dssp             CCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             CcccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEe
Confidence            1111236999987665555678899999998 99877643

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.21  E-value=0.012  Score=50.51  Aligned_cols=78  Identities=18%  Similarity=0.192  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ |++|.++++.+...|+ +|+.+ .+++++.+.+    ++.+... .  .|-.+  ..+..+.+++..  
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   79 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ--PAKIKEMFQQIDET   79 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5788999987 9999999999999999 88886 8887765544    2334322 2  23332  122333232221  


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                      .+ ++|++|++.|
T Consensus        80 ~g-~id~lv~nAg   91 (258)
T 3oid_A           80 FG-RLDVFVNNAA   91 (258)
T ss_dssp             HS-CCCEEEECCC
T ss_pred             cC-CCCEEEECCC
Confidence            13 6899999886

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.21  E-value=0.03  Score=49.58  Aligned_cols=88  Identities=19%  Similarity=0.260  Sum_probs=61.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      .+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|.. +.  .     +..+.+.      +.|+||.|+.
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~~--~-----~~~~~~~------~~DvVi~av~   95 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGAR-LG--R-----TPAEVVS------TCDITFACVS   95 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCE-EC--S-----CHHHHHH------HCSEEEECCS
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCE-Ec--C-----CHHHHHh------cCCEEEEeCC
Confidence            579999999999999988888898 899999999988887777653 11  1     1222222      4799999988


Q ss_pred             ChHHHHHHHH-------hhccCCeEEEEEcc
Q 019822          232 VPSLLSEALE-------TTKVGKGKVIVIGV  255 (335)
Q Consensus       232 ~~~~~~~~~~-------~l~~~~G~~v~~g~  255 (335)
                      .+..+...+.       .+.++ ..++.++.
T Consensus        96 ~~~~~~~v~~~~~~~~~~l~~~-~~vv~~s~  125 (316)
T 2uyy_A           96 DPKAAKDLVLGPSGVLQGIRPG-KCYVDMST  125 (316)
T ss_dssp             SHHHHHHHHHSTTCGGGGCCTT-CEEEECSC
T ss_pred             CHHHHHHHHcCchhHhhcCCCC-CEEEECCC
Confidence            6545555543       34454 55665654

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.21  E-value=0.014  Score=52.63  Aligned_cols=92  Identities=16%  Similarity=0.247  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      -.+++|.|+|.|.+|...++.++.+|. +|++.++++...+.+++.|+..+   .     ++.+.++      ..|+|+.
T Consensus       162 l~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~-----~l~ell~------~aDvV~l  226 (351)
T 3jtm_A          162 LEGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV---E-----DLNEMLP------KCDVIVI  226 (351)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC---S-----CHHHHGG------GCSEEEE
T ss_pred             ccCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc---C-----CHHHHHh------cCCEEEE
Confidence            357899999999999999999999999 99999988766666667775422   1     1222221      4688887


Q ss_pred             cCCCh-H---HH-HHHHHhhccCCeEEEEEccC
Q 019822          229 CTGVP-S---LL-SEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       229 ~~g~~-~---~~-~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ++... .   .+ ...++.++++ ..+|-++..
T Consensus       227 ~~Plt~~t~~li~~~~l~~mk~g-ailIN~aRG  258 (351)
T 3jtm_A          227 NMPLTEKTRGMFNKELIGKLKKG-VLIVNNARG  258 (351)
T ss_dssp             CSCCCTTTTTCBSHHHHHHSCTT-EEEEECSCG
T ss_pred             CCCCCHHHHHhhcHHHHhcCCCC-CEEEECcCc
Confidence            66531 1   11 4566777776 777766543

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.20  E-value=0.044  Score=47.52  Aligned_cols=85  Identities=22%  Similarity=0.335  Sum_probs=59.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-eEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      +|.|+|+|.+|.+.+..+...|. +|+++++++++.+.+++.|.. .+..  +         +.+.   .+.|+||-|+.
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~--~---------~~~~---~~~D~vi~av~   66 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ--D---------LSLL---QTAKIIFLCTP   66 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES--C---------GGGG---TTCSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC--C---------HHHh---CCCCEEEEECC
Confidence            58899999999999998888898 999999999998888777753 2221  1         1122   26899999998


Q ss_pred             ChHHHHHHHH----hhccCCeEEEEEc
Q 019822          232 VPSLLSEALE----TTKVGKGKVIVIG  254 (335)
Q Consensus       232 ~~~~~~~~~~----~l~~~~G~~v~~g  254 (335)
                      .. .....++    .+.++ ..++.++
T Consensus        67 ~~-~~~~~~~~l~~~~~~~-~~vv~~~   91 (279)
T 2f1k_A           67 IQ-LILPTLEKLIPHLSPT-AIVTDVA   91 (279)
T ss_dssp             HH-HHHHHHHHHGGGSCTT-CEEEECC
T ss_pred             HH-HHHHHHHHHHhhCCCC-CEEEECC
Confidence            65 3344433    34444 4555553

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.20  E-value=0.016  Score=50.41  Aligned_cols=77  Identities=18%  Similarity=0.269  Sum_probs=56.4

Q ss_pred             CCCCCEEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          148 VEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       148 ~~~~~~VlI~G~g-~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .-.|++++|+|.| .+|..++.++...|+ +|+++.+..                      .+..+.++      .+|+|
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t----------------------~~L~~~~~------~ADIV  208 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFT----------------------TDLKSHTT------KADIL  208 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------SSHHHHHT------TCSEE
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------hhHHHhcc------cCCEE
Confidence            3588999999985 589999999999999 888876421                      22333332      58999


Q ss_pred             EEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          227 FECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       227 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      |.++|.+..+.  .+.++++ ..++++|..
T Consensus       209 I~Avg~p~~I~--~~~vk~G-avVIDvgi~  235 (285)
T 3l07_A          209 IVAVGKPNFIT--ADMVKEG-AVVIDVGIN  235 (285)
T ss_dssp             EECCCCTTCBC--GGGSCTT-CEEEECCCE
T ss_pred             EECCCCCCCCC--HHHcCCC-cEEEEeccc
Confidence            99999874432  3457886 888888764

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.20  E-value=0.041  Score=48.82  Aligned_cols=90  Identities=20%  Similarity=0.232  Sum_probs=64.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhcCCc-eEeCCCCCCchhHHHHHHh-hhCCCCccEEEE
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAFGMT-DFINPDDEPNKSISELVKG-ITHGMGVDYCFE  228 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~-~~~g~g~d~vid  228 (335)
                      .+|.|+|.|.+|...++.++..|.. +|++.++++++.+.++++|.. ......+           + ..  ++.|+||-
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~-----------~~~~--~~aDvVil  100 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA-----------KVED--FSPDFVML  100 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTT-----------GGGG--GCCSEEEE
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHH-----------HHhh--ccCCEEEE
Confidence            6899999999999999999988864 899999999999999888863 2222111           1 11  26899999


Q ss_pred             cCCChH---HHHHHHHhhccCCeEEEEEcc
Q 019822          229 CTGVPS---LLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       229 ~~g~~~---~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      |+....   .+..+...++++ ..++.++.
T Consensus       101 avp~~~~~~vl~~l~~~l~~~-~iv~d~~S  129 (314)
T 3ggo_A          101 SSPVRTFREIAKKLSYILSED-ATVTDQGS  129 (314)
T ss_dssp             CSCGGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             eCCHHHHHHHHHHHhhccCCC-cEEEECCC
Confidence            987642   333444556665 56666544

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.20  E-value=0.017  Score=51.34  Aligned_cols=78  Identities=21%  Similarity=0.207  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCC--c-e--EeCCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM--T-D--FINPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga--~-~--v~~~~~~~~~~~~~~i~~~~-  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.    +.+.  . .  ..|-.+  ...+.+.+++.. 
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~   83 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS--REGFKMAADEVEA   83 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence            5679999987 9999999999999999 9999999988766542    2232  1 1  223333  233333333321 


Q ss_pred             -CCCCccEEEEcCC
Q 019822          219 -HGMGVDYCFECTG  231 (335)
Q Consensus       219 -~g~g~d~vid~~g  231 (335)
                       .+ ++|++|++.|
T Consensus        84 ~~g-~id~lv~nAg   96 (319)
T 3ioy_A           84 RFG-PVSILCNNAG   96 (319)
T ss_dssp             HTC-CEEEEEECCC
T ss_pred             hCC-CCCEEEECCC
Confidence             13 6899999888

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.19  E-value=0.026  Score=47.74  Aligned_cols=72  Identities=19%  Similarity=0.111  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      .+.+|||+|+ |.+|..+++.+...  |+ +|+++++++++.+.+ ..+...+ .|..+   .   +.+.+...  ++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d---~---~~~~~~~~--~~d~   72 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITD---A---DSINPAFQ--GIDA   72 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTS---H---HHHHHHHT--TCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCC---H---HHHHHHHc--CCCE
Confidence            4578999987 99999999998888  78 999999987766543 1122222 23332   2   23444433  5899


Q ss_pred             EEEcCC
Q 019822          226 CFECTG  231 (335)
Q Consensus       226 vid~~g  231 (335)
                      ||++.+
T Consensus        73 vi~~a~   78 (253)
T 1xq6_A           73 LVILTS   78 (253)
T ss_dssp             EEECCC
T ss_pred             EEEecc
Confidence            999876

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.18  E-value=0.028  Score=51.78  Aligned_cols=96  Identities=13%  Similarity=0.093  Sum_probs=62.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC--CEEEEEcCChhhHHHH-HhcC------Cce-EeCCCCCCchhHHHHHHhhhCCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGA--AKIIGIDKNPWKKEKG-KAFG------MTD-FINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~--~~V~~~~~~~~~~~~~-~~lg------a~~-v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .+|+|+|+|.+|..+++.+...|.  .+|++++++.++.+.+ ++++      ... .+|..+  ..++.+.+++.    
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d--~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS--IEELVALINEV----   75 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC--HHHHHHHHHHH----
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC--HHHHHHHHHhh----
Confidence            378999999999999998887773  3899999999887664 3332      211 233332  12333333332    


Q ss_pred             CccEEEEcCCChHHHHHHHHhhccCCeEEEEEc
Q 019822          222 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       222 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ++|+||++++.......+..++..+ -.++++.
T Consensus        76 ~~DvVin~ag~~~~~~v~~a~l~~g-~~vvD~a  107 (405)
T 4ina_A           76 KPQIVLNIALPYQDLTIMEACLRTG-VPYLDTA  107 (405)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHHT-CCEEESS
T ss_pred             CCCEEEECCCcccChHHHHHHHHhC-CCEEEec
Confidence            5899999998654445556667675 5666553

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.16  E-value=0.041  Score=48.60  Aligned_cols=90  Identities=16%  Similarity=0.089  Sum_probs=63.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+..   .     .+..+.++      ..|+||-++
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~-----~~~~e~~~------~aDvVi~~v   73 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHL---C-----ESVKAALS------ASPATIFVL   73 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEE---C-----SSHHHHHH------HSSEEEECC
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee---c-----CCHHHHHh------cCCEEEEEe
Confidence            4579999999999999999888999 9999999999998887777532   1     12333332      468999988


Q ss_pred             CChHHHHHHHH-----hhccCCeEEEEEccC
Q 019822          231 GVPSLLSEALE-----TTKVGKGKVIVIGVG  256 (335)
Q Consensus       231 g~~~~~~~~~~-----~l~~~~G~~v~~g~~  256 (335)
                      ..+..++..+.     .+.++ ..++.++..
T Consensus        74 p~~~~~~~v~~~~~l~~~~~g-~ivid~st~  103 (306)
T 3l6d_A           74 LDNHATHEVLGMPGVARALAH-RTIVDYTTN  103 (306)
T ss_dssp             SSHHHHHHHHTSTTHHHHTTT-CEEEECCCC
T ss_pred             CCHHHHHHHhcccchhhccCC-CEEEECCCC
Confidence            87644444432     34454 566665543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.16  E-value=0.017  Score=50.23  Aligned_cols=77  Identities=21%  Similarity=0.258  Sum_probs=56.8

Q ss_pred             CCCCCEEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          148 VEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       148 ~~~~~~VlI~G~g-~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .-.|++++|+|.| .+|..++.++...|+ +|+++.+..                      .+..+.++      .+|+|
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t----------------------~~L~~~~~------~ADIV  207 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT----------------------KDLSLYTR------QADLI  207 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------SCHHHHHT------TCSEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc----------------------hhHHHHhh------cCCEE
Confidence            3589999999975 589999999999999 888887421                      12322222      58999


Q ss_pred             EEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          227 FECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       227 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      |.++|.+..+.  .+.++++ ..++++|..
T Consensus       208 I~Avg~p~~I~--~~~vk~G-avVIDVgi~  234 (285)
T 3p2o_A          208 IVAAGCVNLLR--SDMVKEG-VIVVDVGIN  234 (285)
T ss_dssp             EECSSCTTCBC--GGGSCTT-EEEEECCCE
T ss_pred             EECCCCCCcCC--HHHcCCC-eEEEEeccC
Confidence            99999874432  3557886 888888864

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.16  E-value=0.0095  Score=52.10  Aligned_cols=78  Identities=18%  Similarity=0.273  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-----------HHHHHhcCCce-E--eCCCCCCchhHHHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-----------KEKGKAFGMTD-F--INPDDEPNKSISELV  214 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~-----------~~~~~~lga~~-v--~~~~~~~~~~~~~~i  214 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+.+++++++           .+.+++.+... .  .|-.+  ..+..+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~   84 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD--GDAVAAAV   84 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS--HHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHH
Confidence            5689999987 9999999999998999 99999988762           22233444322 1  23332  12232223


Q ss_pred             H---hhhCCCCccEEEEcCCC
Q 019822          215 K---GITHGMGVDYCFECTGV  232 (335)
Q Consensus       215 ~---~~~~g~g~d~vid~~g~  232 (335)
                      +   +.. + ++|++|++.|.
T Consensus        85 ~~~~~~~-g-~id~lvnnAg~  103 (285)
T 3sc4_A           85 AKTVEQF-G-GIDICVNNASA  103 (285)
T ss_dssp             HHHHHHH-S-CCSEEEECCCC
T ss_pred             HHHHHHc-C-CCCEEEECCCC
Confidence            2   222 2 69999998873

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.15  E-value=0.015  Score=50.50  Aligned_cols=102  Identities=10%  Similarity=0.027  Sum_probs=68.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHhc-----CCce--EeCCCCCCchhHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAF-----GMTD--FINPDDEPNKSISE  212 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~l-----ga~~--v~~~~~~~~~~~~~  212 (335)
                      +.....+.++++||-+|+| .|..+..+++..  +. +|++++.+++..+.+++.     |.+.  ++..+.      . 
T Consensus       102 ~~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~------~-  172 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDI------A-  172 (275)
T ss_dssp             ----CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCT------T-
T ss_pred             HHHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECch------h-
Confidence            3455678899999999987 477888888874  45 999999999888777542     4322  222221      1 


Q ss_pred             HHHhhhCCCCccEEEEcCCCh-HHHHHHHHhhccCCeEEEEEccC
Q 019822          213 LVKGITHGMGVDYCFECTGVP-SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       213 ~i~~~~~g~g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                         +......+|+|+.....+ ..++.+.+.|+++ |+++.....
T Consensus       173 ---~~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~  213 (275)
T 1yb2_A          173 ---DFISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLPN  213 (275)
T ss_dssp             ---TCCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEESS
T ss_pred             ---ccCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence               111223799999655443 5788999999997 998887643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.15  E-value=0.017  Score=49.26  Aligned_cols=79  Identities=18%  Similarity=0.172  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+    ++.+... .  .|-.+  ...+.+.+++..  .
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFAISKL   86 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence            4678999987 9999999999988999 999999988765543    2234321 2  23332  122333232211  1


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      + ++|++|++.|.
T Consensus        87 ~-~~d~vi~~Ag~   98 (255)
T 1fmc_A           87 G-KVDILVNNAGG   98 (255)
T ss_dssp             S-SCCEEEECCCC
T ss_pred             C-CCCEEEECCCC
Confidence            2 69999998873

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.15  E-value=0.0099  Score=50.39  Aligned_cols=101  Identities=18%  Similarity=0.227  Sum_probs=67.8

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhc----C-CceEeCCCCCCchhHHHHHHhh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAF----G-MTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~l----g-a~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      +...++||++||=+|+|+ |..+..+|+..|. .+|++++.+++..+.+++.    + ...|..... . ..   .. ..
T Consensus        71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~-~-p~---~~-~~  143 (233)
T 4df3_A           71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR-F-PE---KY-RH  143 (233)
T ss_dssp             SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT-C-GG---GG-TT
T ss_pred             hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc-C-cc---cc-cc
Confidence            346789999999999875 8899999998875 4899999999988777543    2 122322111 0 11   01 11


Q ss_pred             hCCCCccEEEEcCCCh----HHHHHHHHhhccCCeEEEEE
Q 019822          218 THGMGVDYCFECTGVP----SLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ..+ .+|+||.....+    ..+.++.+.|+++ |+++..
T Consensus       144 ~~~-~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          144 LVE-GVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             TCC-CEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccc-eEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            122 689988655433    2567778899998 998765

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.13  E-value=0.017  Score=50.16  Aligned_cols=81  Identities=22%  Similarity=0.286  Sum_probs=52.0

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-------------ChhhHHHH----HhcCCce---EeCCCCCC
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-------------NPWKKEKG----KAFGMTD---FINPDDEP  206 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-------------~~~~~~~~----~~lga~~---v~~~~~~~  206 (335)
                      .-.++++||+|+ +++|.++++.+...|+ +|+++++             ++++.+.+    ++.+...   ..|-.+  
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--   88 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD--   88 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC--
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC--
Confidence            346789999987 9999999999999999 9999987             45555443    3334322   123333  


Q ss_pred             chhHHHHHHhhh--CCCCccEEEEcCCC
Q 019822          207 NKSISELVKGIT--HGMGVDYCFECTGV  232 (335)
Q Consensus       207 ~~~~~~~i~~~~--~g~g~d~vid~~g~  232 (335)
                      ..+..+.+++..  -+ ++|++|++.|.
T Consensus        89 ~~~v~~~~~~~~~~~g-~id~lvnnAg~  115 (280)
T 3pgx_A           89 DAALRELVADGMEQFG-RLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHHHHC-CCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcC-CCCEEEECCCC
Confidence            122333332221  12 69999998873

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.13  E-value=0.018  Score=50.17  Aligned_cols=35  Identities=26%  Similarity=0.129  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      -.++++||+|+ +++|.++++.+...|+ +|+.++++
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~   43 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDIC   43 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEccc
Confidence            35789999987 9999999999999999 99999876

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=96.13  E-value=0.028  Score=47.46  Aligned_cols=95  Identities=17%  Similarity=0.100  Sum_probs=65.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      +.++.+||-+|+|. |..+..+++. |+ +|++++.+++..+.+++.  ..++.      .+....+..+..+ .+|+|+
T Consensus        39 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~------~d~~~~~~~~~~~-~fD~i~  106 (240)
T 3dli_A           39 FKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK------SDAIEYLKSLPDK-YLDGVM  106 (240)
T ss_dssp             TTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC------SCHHHHHHTSCTT-CBSEEE
T ss_pred             hcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceee------ccHHHHhhhcCCC-CeeEEE
Confidence            56788999999864 6666666665 88 899999999999988776  22332      2233333333333 799998


Q ss_pred             EcC-----CC---hHHHHHHHHhhccCCeEEEEEcc
Q 019822          228 ECT-----GV---PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       228 d~~-----g~---~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ...     ..   ...+..+.+.|+++ |+++....
T Consensus       107 ~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  141 (240)
T 3dli_A          107 ISHFVEHLDPERLFELLSLCYSKMKYS-SYIVIESP  141 (240)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEEE
T ss_pred             ECCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            632     21   34678889999998 99887543

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.13  E-value=0.026  Score=50.62  Aligned_cols=91  Identities=25%  Similarity=0.334  Sum_probs=66.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      -.+++|.|+|.|.+|...++.++.+|. +|++.+++..+ +.+.++|+..    .+     +.    ++..  ..|+|+.
T Consensus       163 l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~~-----l~----ell~--~aDvV~l  225 (335)
T 2g76_A          163 LNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ----LP-----LE----EIWP--LCDFITV  225 (335)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE----CC-----HH----HHGG--GCSEEEE
T ss_pred             CCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee----CC-----HH----HHHh--cCCEEEE
Confidence            357899999999999999999999999 99999987665 4566777642    12     22    2221  5799998


Q ss_pred             cCCChH----HH-HHHHHhhccCCeEEEEEccCC
Q 019822          229 CTGVPS----LL-SEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       229 ~~g~~~----~~-~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      ++...+    .+ ...++.++++ +.++.++...
T Consensus       226 ~~P~t~~t~~li~~~~l~~mk~g-ailIN~arg~  258 (335)
T 2g76_A          226 HTPLLPSTTGLLNDNTFAQCKKG-VRVVNCARGG  258 (335)
T ss_dssp             CCCCCTTTTTSBCHHHHTTSCTT-EEEEECSCTT
T ss_pred             ecCCCHHHHHhhCHHHHhhCCCC-cEEEECCCcc
Confidence            776432    22 3567788887 8888887643

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.12  E-value=0.027  Score=49.12  Aligned_cols=80  Identities=19%  Similarity=0.213  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhhC-C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGITH-G  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~-g  220 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+    ++.+... .  .|-.+  ...+.+.+++... .
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK--KEEISEVINKILTEH  119 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC--HHHHHHHHHHHHHhc
Confidence            4678999987 9999999999988899 999998887765543    2234322 2  23332  1233333332211 1


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                      .++|++|++.|.
T Consensus       120 ~~id~li~~Ag~  131 (285)
T 2c07_A          120 KNVDILVNNAGI  131 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            269999998873

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.12  E-value=0.022  Score=49.98  Aligned_cols=41  Identities=15%  Similarity=0.173  Sum_probs=35.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~   58 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSA   58 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence            4688999987 9999999999999999 999999988776543

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.11  E-value=0.066  Score=46.65  Aligned_cols=41  Identities=27%  Similarity=0.351  Sum_probs=36.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  193 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  193 (335)
                      ++|.|+|+|.+|...++.+...|+ +|++.++++++.+.+++
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            589999999999999999999999 99999999988776643

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.11  E-value=0.024  Score=48.98  Aligned_cols=78  Identities=22%  Similarity=0.295  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC---ceE--eCCCCCCchhHHHHHHhhh--CC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM---TDF--INPDDEPNKSISELVKGIT--HG  220 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga---~~v--~~~~~~~~~~~~~~i~~~~--~g  220 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ ++++.   ..+  .|-.+  ..++.+.+++..  .+
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK--DEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHHS
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence            5688999987 9999999999988999 999999988765543 33432   112  23332  122333333221  12


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                       ++|++|++.|
T Consensus        92 -~id~li~~Ag  101 (278)
T 2bgk_A           92 -KLDIMFGNVG  101 (278)
T ss_dssp             -CCCEEEECCC
T ss_pred             -CCCEEEECCc
Confidence             6999999887

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.11  E-value=0.066  Score=41.81  Aligned_cols=76  Identities=11%  Similarity=0.027  Sum_probs=50.8

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHHH---hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKGK---AFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~-~~~~~~~~---~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      ..+++|+|+|.+|...++.+...|. +|++++++ +++.+.++   ..|.. ++..+.   .+ .+.+++. +=.++|+|
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~---~~-~~~l~~a-~i~~ad~v   75 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS---ND-SSVLKKA-GIDRCRAI   75 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCT---TS-HHHHHHH-TTTTCSEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCe-EEEcCC---CC-HHHHHHc-ChhhCCEE
Confidence            4678999999999999999999999 99999987 45554443   22443 332222   11 1233332 12378999


Q ss_pred             EEcCCCh
Q 019822          227 FECTGVP  233 (335)
Q Consensus       227 id~~g~~  233 (335)
                      +-+++..
T Consensus        76 i~~~~~d   82 (153)
T 1id1_A           76 LALSDND   82 (153)
T ss_dssp             EECSSCH
T ss_pred             EEecCCh
Confidence            9999876

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.11  E-value=0.021  Score=51.51  Aligned_cols=88  Identities=18%  Similarity=0.245  Sum_probs=59.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+++|.|+|.|.+|...++.++.+|. +|++.+++. +.+.+.+.|+..+        .++.+.++      ..|+|+-+
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~--------~~l~ell~------~aDiV~l~  222 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA--------ESKDALFE------QSDVLSVH  222 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC--------SSHHHHHH------HCSEEEEC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe--------CCHHHHHh------hCCEEEEe
Confidence            47899999999999999999999999 999999875 4455566675421        12222232      36788776


Q ss_pred             CCChH----H-HHHHHHhhccCCeEEEEEc
Q 019822          230 TGVPS----L-LSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       230 ~g~~~----~-~~~~~~~l~~~~G~~v~~g  254 (335)
                      +...+    . -...++.++++ ..+|-++
T Consensus       223 ~Plt~~t~~li~~~~l~~mk~g-ailIN~a  251 (352)
T 3gg9_A          223 LRLNDETRSIITVADLTRMKPT-ALFVNTS  251 (352)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             ccCcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence            64221    1 13556667776 7777666

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.10  E-value=0.022  Score=49.66  Aligned_cols=41  Identities=20%  Similarity=0.193  Sum_probs=35.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      +++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~   68 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKV   68 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            4678999987 9999999999988999 999999998876654

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.10  E-value=0.016  Score=50.71  Aligned_cols=76  Identities=25%  Similarity=0.258  Sum_probs=57.1

Q ss_pred             CCCCEEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          149 EKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       149 ~~~~~VlI~G~g-~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -.+.+++|+|.| .+|..++.++...|+ +|+++.+.                   .   .++.+.++      .+|+||
T Consensus       163 l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~-------------------t---~~L~~~~~------~ADIVI  213 (301)
T 1a4i_A          163 IAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSK-------------------T---AHLDEEVN------KGDILV  213 (301)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT-------------------C---SSHHHHHT------TCSEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECC-------------------c---ccHHHHhc------cCCEEE
Confidence            578999999987 689999999999999 89888632                   1   22333332      589999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .++|.+..+.  .+.++++ ..++++|..
T Consensus       214 ~Avg~p~~I~--~~~vk~G-avVIDVgi~  239 (301)
T 1a4i_A          214 VATGQPEMVK--GEWIKPG-AIVIDCGIN  239 (301)
T ss_dssp             ECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred             ECCCCcccCC--HHHcCCC-cEEEEccCC
Confidence            9999875432  2346786 899999875

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.10  E-value=0.029  Score=50.26  Aligned_cols=88  Identities=18%  Similarity=0.325  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+.+|.|+|.|.+|...++.++..|. +|++.++++++ +.++++|...    .+     +.+.++      ..|+|+.+
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~~-----l~~~l~------~aDvVil~  211 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF----KP-----LEDLLR------ESDFVVLA  211 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE----CC-----HHHHHH------HCSEEEEC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc----CC-----HHHHHh------hCCEEEEC
Confidence            56799999999999999999999999 99999998877 5555666421    11     222222      46888877


Q ss_pred             CCChH----HH-HHHHHhhccCCeEEEEEcc
Q 019822          230 TGVPS----LL-SEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       230 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~  255 (335)
                      +....    .+ ...+..++++ ..++.++.
T Consensus       212 vp~~~~t~~~i~~~~~~~mk~~-ailIn~sr  241 (334)
T 2dbq_A          212 VPLTRETYHLINEERLKLMKKT-AILINIAR  241 (334)
T ss_dssp             CCCCTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             CCCChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence            76432    22 3456667775 66666653

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.09  E-value=0.019  Score=50.32  Aligned_cols=79  Identities=19%  Similarity=0.273  Sum_probs=56.4

Q ss_pred             CCCCCEEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          148 VEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       148 ~~~~~~VlI~G~g-~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .-.|++++|+|.| .+|..++.++...|+ +|+++.+....++                    ..+.++      .+|+|
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~~l~--------------------l~~~~~------~ADIV  214 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTSTED--------------------MIDYLR------TADIV  214 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSCHHH--------------------HHHHHH------TCSEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch--------------------hhhhhc------cCCEE
Confidence            4589999999975 589999999999999 9998875222111                    002222      58999


Q ss_pred             EEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          227 FECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       227 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      |.++|.+..+..  +.++++ ..+++++..
T Consensus       215 I~Avg~p~~I~~--~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          215 IAAMGQPGYVKG--EWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             EECSCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             EECCCCCCCCcH--HhcCCC-cEEEEEecc
Confidence            999998754332  457886 888888754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.08  E-value=0.023  Score=49.40  Aligned_cols=79  Identities=11%  Similarity=0.153  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh----cCCce-E--eCCCCCCchhHHHHHHhhh-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KA----FGMTD-F--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~----lga~~-v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      -.++++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+ ++    .+... .  .|-.+  ..+..+.+++.. 
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~  101 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA--PPAVMAAVDQALK  101 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            35789999987 9999999999999999 999999998765543 22    24321 2  23333  122333333221 


Q ss_pred             -CCCCccEEEEcCC
Q 019822          219 -HGMGVDYCFECTG  231 (335)
Q Consensus       219 -~g~g~d~vid~~g  231 (335)
                       -+ ++|++|++.|
T Consensus       102 ~~g-~id~lv~nAg  114 (277)
T 4fc7_A          102 EFG-RIDILINCAA  114 (277)
T ss_dssp             HHS-CCCEEEECCC
T ss_pred             HcC-CCCEEEECCc
Confidence             13 6999999887

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.06  E-value=0.011  Score=50.74  Aligned_cols=67  Identities=18%  Similarity=0.235  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      .+ +++|+|+|++|.+++..+...|+++|+++.++.++.+.+. +++.   ...     .+..+.+.      ++|+||+
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~-----~~~~~~~~------~aDiVIn  172 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL-----DQLDEVVK------KAKSLFN  172 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG-----GGHHHHHH------TCSEEEE
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH-----HHHHhhhc------CCCEEEE
Confidence            45 8999999999999999999999889999999988766542 2321   111     12222222      5899999


Q ss_pred             cCC
Q 019822          229 CTG  231 (335)
Q Consensus       229 ~~g  231 (335)
                      |++
T Consensus       173 atp  175 (253)
T 3u62_A          173 TTS  175 (253)
T ss_dssp             CSS
T ss_pred             CCC
Confidence            885

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.06  E-value=0.018  Score=50.05  Aligned_cols=78  Identities=13%  Similarity=0.200  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hh---cCC---c-eE--eCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KA---FGM---T-DF--INPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~---lga---~-~v--~~~~~~~~~~~~~~i~~~~  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++   .+.   . ..  .|-.+  ..+..+.+++..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   81 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL   81 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC--HHHHHHHHHHHH
Confidence            4678999987 9999999999999999 999999998876554 22   232   1 12  23333  122333333221


Q ss_pred             --CCCCccEEEEcCC
Q 019822          219 --HGMGVDYCFECTG  231 (335)
Q Consensus       219 --~g~g~d~vid~~g  231 (335)
                        -+ ++|++|++.|
T Consensus        82 ~~~g-~iD~lv~nAg   95 (280)
T 1xkq_A           82 KQFG-KIDVLVNNAG   95 (280)
T ss_dssp             HHHS-CCCEEEECCC
T ss_pred             HhcC-CCCEEEECCC
Confidence              12 6999999886

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.06  E-value=0.014  Score=50.57  Aligned_cols=79  Identities=14%  Similarity=0.186  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc---C---Cc-eE--eCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF---G---MT-DF--INPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l---g---a~-~v--~~~~~~~~~~~~~~i~~~~  218 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+ +++   .   .. ..  .|-.+  ..+..+.+++..
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~   81 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL   81 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC--HHHHHHHHHHHH
Confidence            4678999987 9999999999988999 999999998876654 222   2   11 11  23332  122333333221


Q ss_pred             --CCCCccEEEEcCCC
Q 019822          219 --HGMGVDYCFECTGV  232 (335)
Q Consensus       219 --~g~g~d~vid~~g~  232 (335)
                        -+ ++|++|++.|.
T Consensus        82 ~~~g-~id~lv~~Ag~   96 (278)
T 1spx_A           82 GKFG-KLDILVNNAGA   96 (278)
T ss_dssp             HHHS-CCCEEEECCC-
T ss_pred             HHcC-CCCEEEECCCC
Confidence              12 69999998873

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.06  E-value=0.026  Score=48.95  Aligned_cols=34  Identities=24%  Similarity=0.272  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  183 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~  183 (335)
                      -.++++||+|+ +++|.++++.+...|+ +|+++++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r   43 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDI   43 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEec
Confidence            35789999987 9999999999999999 9999987

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.05  E-value=0.022  Score=49.26  Aligned_cols=79  Identities=19%  Similarity=0.278  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHH----HhcCCce-Ee--CCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKG----KAFGMTD-FI--NPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~-~~~~~~~----~~lga~~-v~--~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|++++++ ++..+.+    ++.+... ++  |-.+  ..+..+.+++..  
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~  104 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAAS--ESDFIEAIQTIVQS  104 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHh
Confidence            5789999987 9999999999999999 99999884 4433332    3344322 22  3222  233333333321  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|++|++.|.
T Consensus       105 ~g-~id~li~nAg~  117 (271)
T 4iin_A          105 DG-GLSYLVNNAGV  117 (271)
T ss_dssp             HS-SCCEEEECCCC
T ss_pred             cC-CCCEEEECCCc
Confidence            12 69999998874

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.05  E-value=0.08  Score=48.66  Aligned_cols=113  Identities=18%  Similarity=0.187  Sum_probs=72.4

Q ss_pred             hhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-----------hcCC--ce--EeC
Q 019822          137 TGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-----------AFGM--TD--FIN  201 (335)
Q Consensus       137 ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-----------~lga--~~--v~~  201 (335)
                      ..+..+.....+.++++||=+|+|. |..++++|+..|+.+|++++.+++-.+.++           .+|.  ..  ++.
T Consensus       160 ~~i~~il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~  238 (438)
T 3uwp_A          160 DLVAQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER  238 (438)
T ss_dssp             HHHHHHHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred             HHHHHHHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence            3344466778899999999999874 888899998889867999999986554443           2342  22  232


Q ss_pred             CCCCCchhHHHHHHhhhCCCCccEEEE-cC--C--ChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          202 PDDEPNKSISELVKGITHGMGVDYCFE-CT--G--VPSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       202 ~~~~~~~~~~~~i~~~~~g~g~d~vid-~~--g--~~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      .+- ....+...+    .  .+|+|+- +.  .  -...+...++.|+++ |+++.......
T Consensus       239 GD~-~~lp~~d~~----~--~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f~p  292 (438)
T 3uwp_A          239 GDF-LSEEWRERI----A--NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPFAP  292 (438)
T ss_dssp             CCT-TSHHHHHHH----H--TCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCSSC
T ss_pred             Ccc-cCCcccccc----C--CccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeecccC
Confidence            222 112221111    1  5899984 22  1  123456778889997 99998865444

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.04  E-value=0.022  Score=48.69  Aligned_cols=104  Identities=18%  Similarity=0.198  Sum_probs=66.5

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhh-
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~-  218 (335)
                      ....++++||-+|+|. |..++.+++.+  +. +|++++.+++..+.+++    .|...-+....   .+..+.+..+. 
T Consensus        75 ~~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~---gda~~~l~~l~~  149 (247)
T 1sui_A           75 LKLINAKNTMEIGVYT-GYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPALPVLDEMIK  149 (247)
T ss_dssp             HHHTTCCEEEEECCGG-GHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHH
T ss_pred             HHhhCcCEEEEeCCCc-CHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE---CCHHHHHHHHHh
Confidence            3445678999999864 88888899886  45 99999999988777643    44321111111   22333333331 


Q ss_pred             ---CCCCccEEEEcCC---ChHHHHHHHHhhccCCeEEEEEcc
Q 019822          219 ---HGMGVDYCFECTG---VPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       219 ---~g~g~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                         ....||+||-...   ....++.+.+.|+++ |.++.-..
T Consensus       150 ~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~~  191 (247)
T 1sui_A          150 DEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDNT  191 (247)
T ss_dssp             SGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEECT
T ss_pred             ccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEecC
Confidence               0237999984322   234678889999997 99876543

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.03  E-value=0.014  Score=48.73  Aligned_cols=102  Identities=14%  Similarity=0.205  Sum_probs=67.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHHHHh
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKG  216 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~  216 (335)
                      ....++.+||-+|+|. |..++.+++..  +. +|++++.+++..+.+++    .|..   .++.      .+..+.+..
T Consensus        54 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~------~d~~~~~~~  125 (223)
T 3duw_A           54 VQIQGARNILEIGTLG-GYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRT------GLALDSLQQ  125 (223)
T ss_dssp             HHHHTCSEEEEECCTT-SHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE------SCHHHHHHH
T ss_pred             HHhhCCCEEEEecCCc-cHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE------cCHHHHHHH
Confidence            3456788999999874 88888899887  45 99999999988777643    3532   1222      223333333


Q ss_pred             hhCC--CCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEEccC
Q 019822          217 ITHG--MGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       217 ~~~g--~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +...  ..||+|+-....   ...++.+.+.|+++ |.++.-...
T Consensus       126 ~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~~  169 (223)
T 3duw_A          126 IENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDNVV  169 (223)
T ss_dssp             HHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEESCS
T ss_pred             HHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeCCC
Confidence            3211  369999843322   34678889999997 987766443

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.03  E-value=0.028  Score=50.70  Aligned_cols=91  Identities=22%  Similarity=0.316  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~-~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -.+.+|.|+|.|.+|...++.++ ..|. +|++.+++.++.+.++++|...+   .+     +.+.++      ..|+|+
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---~~-----l~ell~------~aDvVi  225 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV---DS-----LEELAR------RSDCVS  225 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC---SS-----HHHHHH------HCSEEE
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe---CC-----HHHHhc------cCCEEE
Confidence            45789999999999999999999 9999 99999988776666666665421   11     222222      468888


Q ss_pred             EcCCChH----HH-HHHHHhhccCCeEEEEEcc
Q 019822          228 ECTGVPS----LL-SEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       228 d~~g~~~----~~-~~~~~~l~~~~G~~v~~g~  255 (335)
                      .++....    .+ ...++.++++ ..++.++.
T Consensus       226 l~vp~~~~t~~li~~~~l~~mk~g-ailin~sr  257 (348)
T 2w2k_A          226 VSVPYMKLTHHLIDEAFFAAMKPG-SRIVNTAR  257 (348)
T ss_dssp             ECCCCSGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             EeCCCChHHHHHhhHHHHhcCCCC-CEEEECCC
Confidence            7765421    12 2455666665 66655544

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.02  E-value=0.024  Score=50.52  Aligned_cols=91  Identities=13%  Similarity=0.196  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -.+++|.|+|.|.+|...++.++..|. +|++.++ +.++ +.++++|+.. .       .++.+.++      ..|+|+
T Consensus       144 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~-------~~l~ell~------~aDvVi  207 (320)
T 1gdh_A          144 LDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H-------DSLDSLLS------VSQFFS  207 (320)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C-------SSHHHHHH------HCSEEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c-------CCHHHHHh------hCCEEE
Confidence            357899999999999999999999999 9999998 7765 3555677632 1       12222222      479998


Q ss_pred             EcCCChH----HH-HHHHHhhccCCeEEEEEccC
Q 019822          228 ECTGVPS----LL-SEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       228 d~~g~~~----~~-~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .++...+    .+ ...++.++++ ..++.++..
T Consensus       208 l~~p~~~~t~~~i~~~~l~~mk~g-ailIn~arg  240 (320)
T 1gdh_A          208 LNAPSTPETRYFFNKATIKSLPQG-AIVVNTARG  240 (320)
T ss_dssp             ECCCCCTTTTTCBSHHHHTTSCTT-EEEEECSCG
T ss_pred             EeccCchHHHhhcCHHHHhhCCCC-cEEEECCCC
Confidence            8776431    22 3456778886 778777663

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=96.02  E-value=0.025  Score=49.98  Aligned_cols=99  Identities=16%  Similarity=0.030  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC--------C--ceEeCCCCCCchhHHHHHHhh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG--------M--TDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg--------a--~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-        .  -.++.      .+..+.+.+.
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~~~~~  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV------GDGLAFVRQT  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHSS
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE------CcHHHHHHhc
Confidence            35678999998864 677777887655459999999998888775531        1  11221      2333333321


Q ss_pred             hCCCCccEEEE-cCCC---------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          218 THGMGVDYCFE-CTGV---------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       218 ~~g~g~d~vid-~~g~---------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      . ...||+|+. ....         ...++.+.+.|+++ |+++....
T Consensus       166 ~-~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~~  211 (304)
T 3bwc_A          166 P-DNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQGE  211 (304)
T ss_dssp             C-TTCEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             c-CCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            2 337999984 3211         34678899999998 99988643

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.01  E-value=0.015  Score=50.77  Aligned_cols=93  Identities=16%  Similarity=0.159  Sum_probs=63.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-----C---------Cc--eEeCCCCCCchhHHH
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-----G---------MT--DFINPDDEPNKSISE  212 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-----g---------a~--~v~~~~~~~~~~~~~  212 (335)
                      .++.+||++|+|. |..+..+++. +..+|++++.+++..+.+++.     +         ..  .++.      .+..+
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~------~D~~~  145 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI------GDGFE  145 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE------SCHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE------CchHH
Confidence            4568999998864 6777788877 766999999999988887653     1         11  1221      22333


Q ss_pred             HHHhhhCCCCccEEE-EcCC---------ChHHHHHHHHhhccCCeEEEEE
Q 019822          213 LVKGITHGMGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       213 ~i~~~~~g~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .+..  . ..+|+|+ |...         ....++.+.+.|+++ |.++..
T Consensus       146 ~l~~--~-~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~  192 (281)
T 1mjf_A          146 FIKN--N-RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQ  192 (281)
T ss_dssp             HHHH--C-CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             Hhcc--c-CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEE
Confidence            3433  2 3799998 5432         244678899999998 998875

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.01  E-value=0.02  Score=52.43  Aligned_cols=90  Identities=13%  Similarity=0.151  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+++|.|+|.|.+|...++.++.+|. +|++.+++..+.+..+++|+...   .     ++.    ++..  ..|+|+.+
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~---~-----~l~----ell~--~aDvV~l~  254 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH---A-----TRE----DMYP--VCDVVTLN  254 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC---S-----SHH----HHGG--GCSEEEEC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec---C-----CHH----HHHh--cCCEEEEe
Confidence            57899999999999999999999999 99999988766666666675421   1     121    1211  46777776


Q ss_pred             CCCh----HHH-HHHHHhhccCCeEEEEEcc
Q 019822          230 TGVP----SLL-SEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       230 ~g~~----~~~-~~~~~~l~~~~G~~v~~g~  255 (335)
                      +...    ..+ ...++.++++ ..++.++.
T Consensus       255 ~Plt~~t~~li~~~~l~~mk~g-ailIN~aR  284 (393)
T 2nac_A          255 CPLHPETEHMINDETLKLFKRG-AYIVNTAR  284 (393)
T ss_dssp             SCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             cCCchHHHHHhhHHHHhhCCCC-CEEEECCC
Confidence            6532    122 3455666675 66666654

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.01  E-value=0.016  Score=49.42  Aligned_cols=79  Identities=24%  Similarity=0.330  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-PWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~-~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|++++++ +++.+.+    ++.+.. ..  .|-.+  .....+.+++..  
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT--SEACQQLVDEFVAK   82 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 9999999999988999 99999988 6655443    222422 12  23332  122333333221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|++|++.|.
T Consensus        83 ~g-~id~vi~~Ag~   95 (258)
T 3afn_B           83 FG-GIDVLINNAGG   95 (258)
T ss_dssp             HS-SCSEEEECCCC
T ss_pred             cC-CCCEEEECCCC
Confidence            12 69999998874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.01  E-value=0.026  Score=48.31  Aligned_cols=78  Identities=18%  Similarity=0.247  Sum_probs=49.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHH-Hh---cCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK--KEKG-KA---FGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~--~~~~-~~---lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      ++++||+|+ |++|.++++.+...|+ +|+++++++++  .+.+ ++   .+... .  .|-.+  ..+..+.+++..  
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~   78 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD--KANFDSAIDEAAEK   78 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            578999987 9999999998888899 99999988776  4332 22   24221 1  23332  122333332221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -+ ++|++|++.|.
T Consensus        79 ~g-~iD~lv~nAg~   91 (258)
T 3a28_C           79 LG-GFDVLVNNAGI   91 (258)
T ss_dssp             HT-CCCEEEECCCC
T ss_pred             hC-CCCEEEECCCC
Confidence            12 69999998873

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.00  E-value=0.02  Score=49.58  Aligned_cols=41  Identities=7%  Similarity=0.084  Sum_probs=34.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG  191 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~  191 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ ++++.+.+
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~   52 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRL   52 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHH
Confidence            4678999987 9999999999999999 9999998 77765543

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.00  E-value=0.055  Score=47.40  Aligned_cols=88  Identities=14%  Similarity=0.186  Sum_probs=60.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      .+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|.. +  ..     +..+.+.      ..|+|+-|+.
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~--~~-----~~~~~~~------~~D~vi~~vp   69 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQ-A--CE-----NNQKVAA------ASDIIFTSLP   69 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCE-E--CS-----SHHHHHH------HCSEEEECCS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCe-e--cC-----CHHHHHh------CCCEEEEECC
Confidence            479999999999998888888898 999999999888887766643 1  11     1222222      4799999987


Q ss_pred             ChHHHHHHH-------HhhccCCeEEEEEcc
Q 019822          232 VPSLLSEAL-------ETTKVGKGKVIVIGV  255 (335)
Q Consensus       232 ~~~~~~~~~-------~~l~~~~G~~v~~g~  255 (335)
                      .+..++..+       ..+.++ ..++.++.
T Consensus        70 ~~~~~~~v~~~~~~l~~~l~~~-~~vv~~~~   99 (301)
T 3cky_A           70 NAGIVETVMNGPGGVLSACKAG-TVIVDMSS   99 (301)
T ss_dssp             SHHHHHHHHHSTTCHHHHSCTT-CEEEECCC
T ss_pred             CHHHHHHHHcCcchHhhcCCCC-CEEEECCC
Confidence            654444444       345554 55555543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.99  E-value=0.041  Score=48.10  Aligned_cols=74  Identities=18%  Similarity=0.257  Sum_probs=51.4

Q ss_pred             CCCCEEEEEc-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCc-eEeCCCCCCchhHHHHHHhhhCCC
Q 019822          149 EKGSSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GMT-DFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       149 ~~~~~VlI~G-~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----ga~-~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .+++++||+| +|++|.+++..+...|+ +|+++++++++.+.+ +++    +.. ...|..+   .+   .+++...  
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~---~~---~~~~~~~--  187 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD---DA---SRAEAVK--  187 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS---HH---HHHHHTT--
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC---HH---HHHHHHH--
Confidence            4678999998 59999999999999999 799999988776544 222    222 1233332   22   3333332  


Q ss_pred             CccEEEEcCC
Q 019822          222 GVDYCFECTG  231 (335)
Q Consensus       222 g~d~vid~~g  231 (335)
                      .+|++|+++|
T Consensus       188 ~~DvlVn~ag  197 (287)
T 1lu9_A          188 GAHFVFTAGA  197 (287)
T ss_dssp             TCSEEEECCC
T ss_pred             hCCEEEECCC
Confidence            4899999996

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.99  E-value=0.021  Score=49.54  Aligned_cols=36  Identities=22%  Similarity=0.281  Sum_probs=32.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+.++++.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~   41 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAV   41 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccch
Confidence            5789999987 9999999999999999 9999998865

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.99  E-value=0.023  Score=48.83  Aligned_cols=79  Identities=22%  Similarity=0.293  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARM-HGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~-~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ |.+|.++++.+.. .|+ +|++++++.++.+.+    ++.+.. ..  .|-.+  ..++...++++.  
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   79 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD--LQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCC--HHHHHHHHHHHHHh
Confidence            4678999987 9999999988888 899 999999987765543    222321 22  23332  122333232221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|++|++.|.
T Consensus        80 ~g-~id~li~~Ag~   92 (276)
T 1wma_A           80 YG-GLDVLVNNAGI   92 (276)
T ss_dssp             HS-SEEEEEECCCC
T ss_pred             cC-CCCEEEECCcc
Confidence            12 69999998863

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.99  E-value=0.014  Score=49.98  Aligned_cols=78  Identities=17%  Similarity=0.156  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ |.+|.++++.+...|+ +|+++++ ++++.+.+    ++.+... +  .|-.+  ..+..+.+++..  
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   82 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV--ESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence            4678999987 9999999999988999 9999998 76655433    2234321 2  23332  122333333221  


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                      .+ ++|++|++.|
T Consensus        83 ~g-~id~li~~Ag   94 (261)
T 1gee_A           83 FG-KLDVMINNAG   94 (261)
T ss_dssp             HS-CCCEEEECCC
T ss_pred             cC-CCCEEEECCC
Confidence            12 6999999877

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.98  E-value=0.082  Score=47.81  Aligned_cols=92  Identities=18%  Similarity=0.229  Sum_probs=63.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      ..+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+..   .     .+..+.++..   ...|+||-++
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~---~-----~s~~e~~~~a---~~~DvVi~~v   89 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAG---A-----RSIEEFCAKL---VKPRVVWLMV   89 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBC---C-----SSHHHHHHHS---CSSCEEEECS
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEE---e-----CCHHHHHhcC---CCCCEEEEeC
Confidence            4689999999999999999998999 9999999999998887777531   1     2233333321   2459999888


Q ss_pred             CChHHHHHHHH----hhccCCeEEEEEccC
Q 019822          231 GVPSLLSEALE----TTKVGKGKVIVIGVG  256 (335)
Q Consensus       231 g~~~~~~~~~~----~l~~~~G~~v~~g~~  256 (335)
                      ... .+...++    .+.++ ..++..+..
T Consensus        90 p~~-~v~~vl~~l~~~l~~g-~iiId~st~  117 (358)
T 4e21_A           90 PAA-VVDSMLQRMTPLLAAN-DIVIDGGNS  117 (358)
T ss_dssp             CGG-GHHHHHHHHGGGCCTT-CEEEECSSC
T ss_pred             CHH-HHHHHHHHHHhhCCCC-CEEEeCCCC
Confidence            766 3343333    34454 556655543

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=95.98  E-value=0.065  Score=48.43  Aligned_cols=133  Identities=18%  Similarity=0.164  Sum_probs=81.2

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-CCCEEEE-EcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          152 SSVAVLGLGTVGLGAVDGARMH-GAAKIIG-IDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~-G~~~V~~-~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      -+|.|+|.|.+|...+..++.. ++ ++++ .++++++.+.++++|+. +  +.     ++.+.+.    ...+|+|+.|
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~-~--~~-----~~~~ll~----~~~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLK-I--YE-----SYEAVLA----DEKVDAVLIA   72 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCC-B--CS-----CHHHHHH----CTTCCEEEEC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCc-e--eC-----CHHHHhc----CCCCCEEEEc
Confidence            4789999999998887777766 66 6654 57788887777777763 2  22     2333332    2379999999


Q ss_pred             CCChHHHHHHHHhhccCCeEEEEEccCCC-c-cccchhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCC
Q 019822          230 TGVPSLLSEALETTKVGKGKVIVIGVGVD-A-MVPLNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~-~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~  301 (335)
                      +......+.+..++..+  .-|++..+.. . .-...+.... .+++.+.-...  ......+..+.+++++|.+
T Consensus        73 tp~~~h~~~~~~al~aG--khVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~--~r~~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           73 TPNDSHKELAISALEAG--KHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQN--RRWDEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             SCGGGHHHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECG--GGGCHHHHHHHHHHHHTTT
T ss_pred             CCcHHHHHHHHHHHHCC--CCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEee--eccCHHHHHHHHHHHcCCC
Confidence            99887788888888874  5556654432 0 0001111111 23443332221  1123456778888888875

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.97  E-value=0.023  Score=49.35  Aligned_cols=82  Identities=21%  Similarity=0.270  Sum_probs=59.3

Q ss_pred             HhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCC
Q 019822          144 KEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       144 ~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      +..+. -.|++++|+|. +.+|..++.++...|+ +|+++.+..                      .+..+.++      
T Consensus       153 ~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~T----------------------~~L~~~~~------  203 (286)
T 4a5o_A          153 ASTGADLYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRFT----------------------RDLADHVS------  203 (286)
T ss_dssp             HHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTTC----------------------SCHHHHHH------
T ss_pred             HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCC----------------------cCHHHHhc------
Confidence            44443 57999999997 5699999999999999 998886421                      12333333      


Q ss_pred             CccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          222 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       222 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .+|+||.++|.+..+.  .+.++++ ..++++|...
T Consensus       204 ~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~~  236 (286)
T 4a5o_A          204 RADLVVVAAGKPGLVK--GEWIKEG-AIVIDVGINR  236 (286)
T ss_dssp             TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCSCS
T ss_pred             cCCEEEECCCCCCCCC--HHHcCCC-eEEEEecccc
Confidence            5899999999874433  2457886 8888988653

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=95.97  E-value=0.005  Score=53.74  Aligned_cols=91  Identities=11%  Similarity=0.034  Sum_probs=57.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      -.+++++|+|+|++|.+++..+...|+++|+++.|+.++.+.+.+- . ...        .+ +.+.+..  .++|+||+
T Consensus       115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-~-~~~--------~~-~~~~~~~--~~aDiVIn  181 (277)
T 3don_A          115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-I-NKI--------NL-SHAESHL--DEFDIIIN  181 (277)
T ss_dssp             GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-C-EEE--------CH-HHHHHTG--GGCSEEEE
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-c-ccc--------cH-hhHHHHh--cCCCEEEE
Confidence            3578999999999999999999999988899999998775543221 1 111        12 1233322  26899999


Q ss_pred             cCCChHHHHH-----HHHhhccCCeEEEEEc
Q 019822          229 CTGVPSLLSE-----ALETTKVGKGKVIVIG  254 (335)
Q Consensus       229 ~~g~~~~~~~-----~~~~l~~~~G~~v~~g  254 (335)
                      |++.. ....     -...++++ ..++++.
T Consensus       182 aTp~G-m~~~~~~~l~~~~l~~~-~~V~D~v  210 (277)
T 3don_A          182 TTPAG-MNGNTDSVISLNRLASH-TLVSDIV  210 (277)
T ss_dssp             CCC--------CCSSCCTTCCSS-CEEEESC
T ss_pred             CccCC-CCCCCcCCCCHHHcCCC-CEEEEec
Confidence            98743 1111     12345564 5666654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.97  E-value=0.024  Score=50.38  Aligned_cols=35  Identities=26%  Similarity=0.335  Sum_probs=31.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      -.++++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~   60 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIG   60 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCc
Confidence            45789999987 9999999999988999 99999876

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.96  E-value=0.017  Score=50.85  Aligned_cols=78  Identities=18%  Similarity=0.248  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC---c-eE--eCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM---T-DF--INPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga---~-~v--~~~~~~~~~~~~~~i~~~~  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+.   . ..  .|-.+  ..+..+.+++..
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~  101 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTTL  101 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC--HHHHHHHHHHHH
Confidence            4688999987 9999999999999999 999999998776554    22232   1 12  23332  122333333221


Q ss_pred             --CCCCccEEEEcCC
Q 019822          219 --HGMGVDYCFECTG  231 (335)
Q Consensus       219 --~g~g~d~vid~~g  231 (335)
                        -+ ++|++|++.|
T Consensus       102 ~~~g-~iD~lvnnAG  115 (297)
T 1xhl_A          102 AKFG-KIDILVNNAG  115 (297)
T ss_dssp             HHHS-CCCEEEECCC
T ss_pred             HhcC-CCCEEEECCC
Confidence              12 6999999887

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.96  E-value=0.025  Score=49.58  Aligned_cols=36  Identities=25%  Similarity=0.376  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+|+|+|+|++|..++..+...|..++..+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            457999999999999999999999999999999765

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.96  E-value=0.021  Score=48.44  Aligned_cols=105  Identities=20%  Similarity=0.131  Sum_probs=66.3

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhh--
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~--  218 (335)
                      ....++++||-+|+|. |..++.+++.+. -.+|++++.+++..+.+++    .|...-+....   .+..+.+..+.  
T Consensus        66 ~~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---gda~~~l~~l~~~  141 (237)
T 3c3y_A           66 LKLVNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE---SDAMLALDNLLQG  141 (237)
T ss_dssp             HHHTTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHHS
T ss_pred             HHhhCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHhc
Confidence            3445778999999864 778888888863 2399999999988777643    35421111111   22333333332  


Q ss_pred             --CCCCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEEcc
Q 019822          219 --HGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       219 --~g~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                        ....||+||-....   ...++.+.+.|+++ |.++.-..
T Consensus       142 ~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~~  182 (237)
T 3c3y_A          142 QESEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDNT  182 (237)
T ss_dssp             TTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECT
T ss_pred             cCCCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEecC
Confidence              12379999843322   34678889999997 98876543

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.95  E-value=0.04  Score=49.11  Aligned_cols=133  Identities=13%  Similarity=0.201  Sum_probs=75.4

Q ss_pred             EEEEEcCCHHHHHH-HHHHHHcCCCEEE-EEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          153 SVAVLGLGTVGLGA-VDGARMHGAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       153 ~VlI~G~g~vG~~a-i~la~~~G~~~V~-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      +|.|+|+|.+|... +..++..+. +++ +.++++++.+. ++++|...++       .++.+    +....++|+|+.+
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~-~~vav~d~~~~~~~~~~~~~g~~~~~-------~~~~~----~l~~~~~D~V~i~   69 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGG-EVVSMMSTSAERGAAYATENGIGKSV-------TSVEE----LVGDPDVDAVYVS   69 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTC-EEEEEECSCHHHHHHHHHHTTCSCCB-------SCHHH----HHTCTTCCEEEEC
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCC-eEEEEECCCHHHHHHHHHHcCCCccc-------CCHHH----HhcCCCCCEEEEe
Confidence            58899999999875 544333777 655 56777777655 4667754222       12322    2222379999999


Q ss_pred             CCChHHHHHHHHhhccCCeEEEEEccCCC-cccc-chhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCC
Q 019822          230 TGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVP-LNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~-~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~  301 (335)
                      +......+.+..++..+  +-+++..+.. .... ..+.... .+++.+.-...  ......+..+.+++++|.+
T Consensus        70 tp~~~h~~~~~~al~~G--k~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~--~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           70 TTNELHREQTLAAIRAG--KHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHH--LRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             SCGGGHHHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCC--GGGSHHHHHHHHHHHTTTT
T ss_pred             CChhHhHHHHHHHHHCC--CeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeeh--hhcCHHHHHHHHHHHcCCC
Confidence            98876777777888764  4455543321 0000 1111111 13444332211  1122346778888888875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.95  E-value=0.035  Score=48.33  Aligned_cols=35  Identities=26%  Similarity=0.253  Sum_probs=31.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      -.++++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~   44 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC   44 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence            35789999987 9999999999999999 99999876

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.95  E-value=0.021  Score=48.89  Aligned_cols=79  Identities=6%  Similarity=0.097  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHH---cCCCEEEEEcCChhhHHHH-Hhc-----CCc-eE--eCCCCCCchhHHHHHHh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARM---HGAAKIIGIDKNPWKKEKG-KAF-----GMT-DF--INPDDEPNKSISELVKG  216 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~---~G~~~V~~~~~~~~~~~~~-~~l-----ga~-~v--~~~~~~~~~~~~~~i~~  216 (335)
                      .++++||+|+ |++|.++++.+..   .|+ +|+++++++++.+.+ +++     +.. ..  .|-.+  .....+.+++
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~   81 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT--EAGVQRLLSA   81 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS--HHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC--HHHHHHHHHH
Confidence            4578899987 9999998888877   899 999999998776554 222     322 11  23333  2333333443


Q ss_pred             hhC---CCCcc--EEEEcCC
Q 019822          217 ITH---GMGVD--YCFECTG  231 (335)
Q Consensus       217 ~~~---g~g~d--~vid~~g  231 (335)
                      ...   ..++|  ++|++.|
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCC
T ss_pred             HHhccccccCCccEEEECCc
Confidence            322   11577  9998876

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.95  E-value=0.039  Score=49.57  Aligned_cols=91  Identities=10%  Similarity=0.135  Sum_probs=62.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      .+|.|+|.|.+|.+.+..++..|. +|++.++++++.+.++++|+...        .+..+.+++..  .+.|+||-|+.
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~--------~~~~e~~~~a~--~~aDlVilavP   77 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS--------ADLEATLQRAA--AEDALIVLAVP   77 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE--------SCHHHHHHHHH--HTTCEEEECSC
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee--------CCHHHHHHhcc--cCCCEEEEeCC
Confidence            579999999999999999999998 99999999999999988887421        12223333211  14799999988


Q ss_pred             ChHHHHHHHHh---hccCCeEEEEEcc
Q 019822          232 VPSLLSEALET---TKVGKGKVIVIGV  255 (335)
Q Consensus       232 ~~~~~~~~~~~---l~~~~G~~v~~g~  255 (335)
                      .. .....++.   +.++ ..++.++.
T Consensus        78 ~~-~~~~vl~~l~~~~~~-~iv~Dv~S  102 (341)
T 3ktd_A           78 MT-AIDSLLDAVHTHAPN-NGFTDVVS  102 (341)
T ss_dssp             HH-HHHHHHHHHHHHCTT-CCEEECCS
T ss_pred             HH-HHHHHHHHHHccCCC-CEEEEcCC
Confidence            54 33333332   3444 45555544

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.95  E-value=0.025  Score=49.11  Aligned_cols=78  Identities=10%  Similarity=0.080  Sum_probs=51.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC---ceE--eCCCCCCchhHHHHHHhhhC-CCCc
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM---TDF--INPDDEPNKSISELVKGITH-GMGV  223 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga---~~v--~~~~~~~~~~~~~~i~~~~~-g~g~  223 (335)
                      +++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ +++..   ...  .|-.+  .....+.+++... -.++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRD--RAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHTCCGGGSSC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHhCCC
Confidence            68999987 9999999999999999 999999998877654 33321   112  23333  1233333333211 1168


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|++.|.
T Consensus        99 D~lvnnAG~  107 (272)
T 2nwq_A           99 RGLINNAGL  107 (272)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998863

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.95  E-value=0.021  Score=49.52  Aligned_cols=96  Identities=18%  Similarity=0.152  Sum_probs=62.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          153 SVAVLGL-GTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      +|||+|+ |.+|..+++.+...  |+ +|+++++++++.+.+...+...+ .|..+   .   +.+.+...  ++|+||+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~d---~---~~l~~~~~--~~d~vi~   72 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQ---P---ESLQKAFA--GVSKLLF   72 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTTC---H---HHHHHHTT--TCSEEEE
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccCC---H---HHHHHHHh--cCCEEEE
Confidence            5899987 99999999888877  88 99999998877665554454332 23332   2   23444433  5899999


Q ss_pred             cCCCh-------HHHHHHHHhhccC-CeEEEEEccCC
Q 019822          229 CTGVP-------SLLSEALETTKVG-KGKVIVIGVGV  257 (335)
Q Consensus       229 ~~g~~-------~~~~~~~~~l~~~-~G~~v~~g~~~  257 (335)
                      +.+..       .....+++..... -++++.++...
T Consensus        73 ~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           73 ISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             cCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            88741       1223444544433 14888887644

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.94  E-value=0.027  Score=49.74  Aligned_cols=101  Identities=17%  Similarity=0.185  Sum_probs=69.0

Q ss_pred             HhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHHHH
Q 019822          144 KEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVK  215 (335)
Q Consensus       144 ~~~~-~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~  215 (335)
                      +... +.++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|..   .++..+-   .++     
T Consensus       110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~-----  179 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNM---LDT-----  179 (312)
T ss_dssp             TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC-----
T ss_pred             HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh---hcC-----
Confidence            3444 77899999999875 7888888887788 99999999988877654    3422   1222211   000     


Q ss_pred             hhhCCCCccEEEEcC-----CChHHHHHHHHhhccCCeEEEEEccC
Q 019822          216 GITHGMGVDYCFECT-----GVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       216 ~~~~g~g~d~vid~~-----g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .+ ....||+|+...     +-...+..+.+.|+++ |+++.....
T Consensus       180 ~~-~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  223 (312)
T 3vc1_A          180 PF-DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITGC  223 (312)
T ss_dssp             CC-CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             CC-CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEcc
Confidence            01 223799998632     2345788999999998 999887643

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.93  E-value=0.016  Score=48.41  Aligned_cols=106  Identities=19%  Similarity=0.178  Sum_probs=67.9

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      ....++.+||-+|+|. |..++.+++.++ ..+|++++.+++..+.+++    .|...-+....   .+..+.+..+...
T Consensus        60 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~  135 (225)
T 3tr6_A           60 VKLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL---SPAKDTLAELIHA  135 (225)
T ss_dssp             HHHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHTT
T ss_pred             HHhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---CCHHHHHHHhhhc
Confidence            3445778999999875 888888988764 3499999999988777644    34321011111   2233333333321


Q ss_pred             ---CCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEEccC
Q 019822          221 ---MGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       221 ---~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                         ..||+|+-....   ...+..+.+.|+++ |.++.-...
T Consensus       136 ~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~~~  176 (225)
T 3tr6_A          136 GQAWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDNVL  176 (225)
T ss_dssp             TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEECSS
T ss_pred             cCCCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeCCC
Confidence               379999843332   34578888999997 998876443

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=95.92  E-value=0.017  Score=47.31  Aligned_cols=97  Identities=14%  Similarity=0.114  Sum_probs=60.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+|||+|+ |.+|..+++.+...|. +|+++++++++.+.....+...+ .|..+   .   +.+.+...  ++|+||++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~~---~---~~~~~~~~--~~d~vi~~   74 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQ---A---ADVDKTVA--GQDAVIVL   74 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTTS---H---HHHHHHHT--TCSEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCceEEEEecCCC---H---HHHHHHHc--CCCEEEEC
Confidence            68999997 9999999999988998 99999998776533211122221 22222   2   23334333  58999998


Q ss_pred             CCChH----------HHHHHHHhhccC-CeEEEEEccCC
Q 019822          230 TGVPS----------LLSEALETTKVG-KGKVIVIGVGV  257 (335)
Q Consensus       230 ~g~~~----------~~~~~~~~l~~~-~G~~v~~g~~~  257 (335)
                      .+...          ....+++.+... .++++.++...
T Consensus        75 a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~  113 (206)
T 1hdo_A           75 LGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF  113 (206)
T ss_dssp             CCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             ccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence            87432          123444444332 15888887543

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.91  E-value=0.022  Score=49.27  Aligned_cols=81  Identities=16%  Similarity=0.189  Sum_probs=59.4

Q ss_pred             HHhcCCCCCCEEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCC
Q 019822          143 WKEAKVEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g-~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .+..+ -.|++++|+|.| .+|..++.++...|+ +|+++.+..                      .+..+.++      
T Consensus       143 L~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~t----------------------~~L~~~~~------  192 (276)
T 3ngx_A          143 MDYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSKT----------------------KDIGSMTR------  192 (276)
T ss_dssp             HHHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC----------------------SCHHHHHH------
T ss_pred             HHHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCCc----------------------ccHHHhhc------
Confidence            34455 789999999985 689999999999999 998886421                      22333343      


Q ss_pred             CccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          222 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       222 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .+|+||.++|.+..+..  +.++++ ..++++|..
T Consensus       193 ~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  224 (276)
T 3ngx_A          193 SSKIVVVAVGRPGFLNR--EMVTPG-SVVIDVGIN  224 (276)
T ss_dssp             HSSEEEECSSCTTCBCG--GGCCTT-CEEEECCCE
T ss_pred             cCCEEEECCCCCccccH--hhccCC-cEEEEeccC
Confidence            47999999998754332  456786 888888764

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.91  E-value=0.016  Score=51.96  Aligned_cols=97  Identities=16%  Similarity=0.157  Sum_probs=65.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC------C----ceEeCCCCCCchhHHHHHHhh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG------M----TDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg------a----~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-      .    -.++.      .+..+.+.+.
T Consensus       118 ~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~------~D~~~~l~~~  190 (334)
T 1xj5_A          118 IPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNA  190 (334)
T ss_dssp             SSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTS
T ss_pred             CCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE------CCHHHHHHhc
Confidence            45678999999864 677788888765459999999998888775531      1    11221      2344444433


Q ss_pred             hCCCCccEEEE-cC---C------ChHHHHHHHHhhccCCeEEEEE
Q 019822          218 THGMGVDYCFE-CT---G------VPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       218 ~~g~g~d~vid-~~---g------~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .. ..||+|+. ..   +      ....+..+.+.|+++ |.++.-
T Consensus       191 ~~-~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          191 AE-GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             CT-TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cC-CCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            22 37999984 33   1      235678899999997 999875

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.90  E-value=0.069  Score=44.80  Aligned_cols=118  Identities=18%  Similarity=0.171  Sum_probs=67.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW-KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -.+.+|||+|+|.+|...+..+...|+ +|++++.+.. ..+.+.+.+.-..+...- .+.+       +   .++|+||
T Consensus        29 L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~~~~-~~~d-------L---~~adLVI   96 (223)
T 3dfz_A           29 LKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKRKKV-GEED-------L---LNVFFIV   96 (223)
T ss_dssp             CTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEECSCC-CGGG-------S---SSCSEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEECCC-CHhH-------h---CCCCEEE
Confidence            357899999999999999999999999 8988886543 233333333222222111 0111       1   2699999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhh-cCcEEEEeecc
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALAC-GGRTLKGTTFG  281 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~  281 (335)
                      -+++.+. ++..+...+.. |..|-+.+... ..++-...++. ..+.+.-++.|
T Consensus        97 aAT~d~~-~N~~I~~~ak~-gi~VNvvD~p~-~~~f~~Paiv~rg~l~iaIST~G  148 (223)
T 3dfz_A           97 VATNDQA-VNKFVKQHIKN-DQLVNMASSFS-DGNIQIPAQFSRGRLSLAISTDG  148 (223)
T ss_dssp             ECCCCTH-HHHHHHHHSCT-TCEEEC------CCSEECCEEEEETTEEEEEECTT
T ss_pred             ECCCCHH-HHHHHHHHHhC-CCEEEEeCCcc-cCeEEEeeEEEeCCEEEEEECCC
Confidence            9999884 45555544555 76655544322 22233222332 34555555444

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.89  E-value=0.02  Score=50.92  Aligned_cols=80  Identities=20%  Similarity=0.211  Sum_probs=50.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHHH----HHhcCCce-E--eCCCCCCch
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN------------PWKKEK----GKAFGMTD-F--INPDDEPNK  208 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~------------~~~~~~----~~~lga~~-v--~~~~~~~~~  208 (335)
                      -.++++||+|+ +++|.++++.+...|+ +|++++++            +++.+.    +++.+... .  .|-.+  ..
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~  120 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD--LA  120 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC--HH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC--HH
Confidence            46789999987 9999999999999999 99998765            444333    23344332 1  23332  12


Q ss_pred             hHHHHHHhhh--CCCCccEEEEcCCC
Q 019822          209 SISELVKGIT--HGMGVDYCFECTGV  232 (335)
Q Consensus       209 ~~~~~i~~~~--~g~g~d~vid~~g~  232 (335)
                      +..+.+++..  -+ ++|++|++.|.
T Consensus       121 ~v~~~~~~~~~~~g-~iD~lVnnAg~  145 (317)
T 3oec_A          121 SLQAVVDEALAEFG-HIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHHHHS-CCCEEEECCCC
T ss_pred             HHHHHHHHHHHHcC-CCCEEEECCCC
Confidence            2333333221  13 69999998873

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.88  E-value=0.02  Score=49.54  Aligned_cols=78  Identities=15%  Similarity=0.111  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHH---hh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVK---GI  217 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~---~~  217 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ ++++.+.+    ++.+... .  .|-.+  ..+..+.++   +.
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ--ESEVEALFAAVIER  103 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHH
Confidence            5788999987 9999999999999999 8888877 55544433    3344322 2  23332  122322232   22


Q ss_pred             hCCCCccEEEEcCCC
Q 019822          218 THGMGVDYCFECTGV  232 (335)
Q Consensus       218 ~~g~g~d~vid~~g~  232 (335)
                      . + ++|++|++.|.
T Consensus       104 ~-g-~id~lv~nAg~  116 (269)
T 4dmm_A          104 W-G-RLDVLVNNAGI  116 (269)
T ss_dssp             H-S-CCCEEEECCCC
T ss_pred             c-C-CCCEEEECCCC
Confidence            2 3 69999998874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.87  E-value=0.021  Score=49.80  Aligned_cols=40  Identities=13%  Similarity=0.108  Sum_probs=33.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKEK  190 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~-~~~~~  190 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++ ++.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~   63 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVS   63 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHH
Confidence            4678999987 9999999999988999 999999887 65543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.87  E-value=0.03  Score=48.18  Aligned_cols=80  Identities=19%  Similarity=0.314  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-C-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---hcCCc--eE--eCCCCCCchhHHHHHHhhh
Q 019822          149 EKGSSVAVLGL-G-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-K---AFGMT--DF--INPDDEPNKSISELVKGIT  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g-~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~---~lga~--~v--~~~~~~~~~~~~~~i~~~~  218 (335)
                      -.++++||+|+ | ++|.++++.+...|+ +|+.+++++++.+.+ +   +.+..  ..  .|-.+  ..+..+.+++..
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~   96 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS--TEAVDALITQTV   96 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC--HHHHHHHHHHHH
Confidence            35789999987 6 799999999988999 999999998876554 2   22211  12  23332  122333333221


Q ss_pred             --CCCCccEEEEcCCC
Q 019822          219 --HGMGVDYCFECTGV  232 (335)
Q Consensus       219 --~g~g~d~vid~~g~  232 (335)
                        .+ ++|++|++.|.
T Consensus        97 ~~~g-~id~li~~Ag~  111 (266)
T 3o38_A           97 EKAG-RLDVLVNNAGL  111 (266)
T ss_dssp             HHHS-CCCEEEECCCC
T ss_pred             HHhC-CCcEEEECCCc
Confidence              12 69999998873

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.86  E-value=0.0089  Score=50.78  Aligned_cols=39  Identities=23%  Similarity=0.237  Sum_probs=33.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK  188 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~  188 (335)
                      ..++++||+|+ |.+|.++++.+...|+ +|+++++++++.
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~   44 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEE   44 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhc
Confidence            35678999987 9999999999999999 999999887653

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.85  E-value=0.047  Score=44.94  Aligned_cols=97  Identities=11%  Similarity=0.049  Sum_probs=63.1

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CC---------------c--eEe--CC
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GM---------------T--DFI--NP  202 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga---------------~--~v~--~~  202 (335)
                      +....+.++.+||.+|+|. |..+..+++. |+ +|++++.|++-.+.+++. +.               .  ..+  |-
T Consensus        15 ~~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~   91 (203)
T 1pjz_A           15 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   91 (203)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence            3445677889999999874 7777788875 88 999999999988887543 11               0  111  22


Q ss_pred             CCCCchhHHHHHHhhhCCCCccEEEEcCCC--------hHHHHHHHHhhccCCeEEEEE
Q 019822          203 DDEPNKSISELVKGITHGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       203 ~~~~~~~~~~~i~~~~~g~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .+   ..+.       ....||+|++...-        ...++.+.+.|+++ |+++.+
T Consensus        92 ~~---l~~~-------~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~  139 (203)
T 1pjz_A           92 FA---LTAR-------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLI  139 (203)
T ss_dssp             SS---STHH-------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEE
T ss_pred             cc---CCcc-------cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence            21   1111       00269999974321        12467788999997 984444

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.82  E-value=0.027  Score=48.59  Aligned_cols=74  Identities=14%  Similarity=0.117  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHH---HHhhhCCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISEL---VKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~---i~~~~~g~g~d~  225 (335)
                      +|+++||+|+ +++|++.++.+...|+ +|+.+++++++. ..+.+  ....|-.+  ..+....   +.+.. | ++|+
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-~~~~~--~~~~Dv~~--~~~v~~~~~~~~~~~-G-~iDi   81 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG-LPEEL--FVEADLTT--KEGCAIVAEATRQRL-G-GVDV   81 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT-SCTTT--EEECCTTS--HHHHHHHHHHHHHHT-S-SCSE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC-CCcEE--EEEcCCCC--HHHHHHHHHHHHHHc-C-CCCE
Confidence            6899999987 9999999999999999 999999865421 00111  11223322  1223222   22322 3 6999


Q ss_pred             EEEcCC
Q 019822          226 CFECTG  231 (335)
Q Consensus       226 vid~~g  231 (335)
                      ++++.|
T Consensus        82 lVnnAG   87 (261)
T 4h15_A           82 IVHMLG   87 (261)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999876

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.82  E-value=0.027  Score=50.23  Aligned_cols=78  Identities=12%  Similarity=0.177  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-----hhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-----PWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKG  216 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~-----~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~  216 (335)
                      .++++||+|+ |++|.++++.+...|+ +|++++++     +++.+.+    ++.+.. ..  .|-.+  ...+.+.+++
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd--~~~v~~~~~~   80 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQS--QVSVDRAIDQ   80 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHH
Confidence            3578999987 9999999999999999 99987665     3343333    223322 12  23332  2333333333


Q ss_pred             hh--CCCCccEEEEcCC
Q 019822          217 IT--HGMGVDYCFECTG  231 (335)
Q Consensus       217 ~~--~g~g~d~vid~~g  231 (335)
                      ..  .| ++|++|++.|
T Consensus        81 ~~~~~g-~iD~lVnnAG   96 (324)
T 3u9l_A           81 IIGEDG-RIDVLIHNAG   96 (324)
T ss_dssp             HHHHHS-CCSEEEECCC
T ss_pred             HHHHcC-CCCEEEECCC
Confidence            21  13 6999999988

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.82  E-value=0.048  Score=47.31  Aligned_cols=80  Identities=16%  Similarity=0.212  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcC-CH--HHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHH-hcCCceE--eCCCCCCchhHHHHHHhhh--
Q 019822          149 EKGSSVAVLGL-GT--VGLGAVDGARMHGAAKIIGIDKNP--WKKEKGK-AFGMTDF--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~--vG~~ai~la~~~G~~~V~~~~~~~--~~~~~~~-~lga~~v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      -+++++||+|+ |.  +|.++++.+...|+ +|++++++.  +..+.+. +.+....  .|-.+  ..+..+.+++..  
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVIS--DQEIKDLFVELGKV  100 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCC--HHHHHHHHHHHHHH
Confidence            45789999985 44  99999999989999 999999877  4444443 3332222  23332  123333333321  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -+ ++|++|++.|.
T Consensus       101 ~g-~id~li~nAg~  113 (280)
T 3nrc_A          101 WD-GLDAIVHSIAF  113 (280)
T ss_dssp             CS-SCCEEEECCCC
T ss_pred             cC-CCCEEEECCcc
Confidence            13 69999998873

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.81  E-value=0.042  Score=47.81  Aligned_cols=79  Identities=19%  Similarity=0.181  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHH---h
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVK---G  216 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~---~  216 (335)
                      ..++++||+|+ |++|.++++.+...|+ +|+++++ ++++.+.+    ++.+... .  .|-.+  ..+..+.++   +
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~  103 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD--LSSHQATVDAVVA  103 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS--GGGHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHH
Confidence            35788999987 9999999999999999 9998884 65554433    3334322 1  23332  233333333   3


Q ss_pred             hhCCCCccEEEEcCCC
Q 019822          217 ITHGMGVDYCFECTGV  232 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~  232 (335)
                      .. + ++|++|++.|.
T Consensus       104 ~~-g-~iD~lvnnAg~  117 (280)
T 4da9_A          104 EF-G-RIDCLVNNAGI  117 (280)
T ss_dssp             HH-S-CCCEEEEECC-
T ss_pred             Hc-C-CCCEEEECCCc
Confidence            22 2 69999998875

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.80  E-value=0.023  Score=48.96  Aligned_cols=78  Identities=18%  Similarity=0.262  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ |.+|.++++.+...|+ +|+++++ ++++.+.+    ++.+... .  .|-.+  ...+.+.+++..  
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK--PSEVVALFDKAVSH   96 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 9999988 66655433    3335332 2  23332  122333333221  


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                      -+ ++|++|++.|
T Consensus        97 ~~-~~d~vi~~Ag  108 (274)
T 1ja9_A           97 FG-GLDFVMSNSG  108 (274)
T ss_dssp             HS-CEEEEECCCC
T ss_pred             cC-CCCEEEECCC
Confidence            12 6999999876

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=95.79  E-value=0.056  Score=44.73  Aligned_cols=103  Identities=18%  Similarity=0.193  Sum_probs=68.5

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHh-hhCCCC
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKG-ITHGMG  222 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~-~~~g~g  222 (335)
                      ......++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.+...+...+      +...... ...+..
T Consensus        46 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~~~~~  116 (227)
T 3e8s_A           46 LAILGRQPERVLDLGCGE-GWLLRALADR-GI-EAVGVDGDRTLVDAARAAGAGEVHLAS------YAQLAEAKVPVGKD  116 (227)
T ss_dssp             HHHHHTCCSEEEEETCTT-CHHHHHHHTT-TC-EEEEEESCHHHHHHHHHTCSSCEEECC------HHHHHTTCSCCCCC
T ss_pred             HHhhcCCCCEEEEeCCCC-CHHHHHHHHC-CC-EEEEEcCCHHHHHHHHHhcccccchhh------HHhhcccccccCCC
Confidence            334455679999999864 6677777766 88 999999999999998876433332221      2211111 123435


Q ss_pred             ccEEEEcCC-----ChHHHHHHHHhhccCCeEEEEEccC
Q 019822          223 VDYCFECTG-----VPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       223 ~d~vid~~g-----~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +|+|+....     -...+..+.+.|+++ |+++.....
T Consensus       117 fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  154 (227)
T 3e8s_A          117 YDLICANFALLHQDIIELLSAMRTLLVPG-GALVIQTLH  154 (227)
T ss_dssp             EEEEEEESCCCSSCCHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             ccEEEECchhhhhhHHHHHHHHHHHhCCC-eEEEEEecC
Confidence            999986432     235788999999997 998876543

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.79  E-value=0.12  Score=44.67  Aligned_cols=91  Identities=22%  Similarity=0.260  Sum_probs=61.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+|.|+|+|.+|.+.++.++..|.. +|+++++++++.+.++++|... ...  +     .    .+.... +.|+|+.|
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~--~-----~----~~~~~~-~aDvVila   69 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT--S-----I----AKVEDF-SPDFVMLS   69 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES--C-----G----GGGGGT-CCSEEEEC
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC--C-----H----HHHhcC-CCCEEEEc
Confidence            3689999999999999998888753 7999999999988888888631 221  1     1    111111 58999999


Q ss_pred             CCChHH---HHHHHHhhccCCeEEEEEcc
Q 019822          230 TGVPSL---LSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       230 ~g~~~~---~~~~~~~l~~~~G~~v~~g~  255 (335)
                      +.....   +..+...+.++ ..++.++.
T Consensus        70 vp~~~~~~v~~~l~~~l~~~-~iv~~~~~   97 (281)
T 2g5c_A           70 SPVRTFREIAKKLSYILSED-ATVTDQGS   97 (281)
T ss_dssp             SCHHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             CCHHHHHHHHHHHHhhCCCC-cEEEECCC
Confidence            986532   23333445665 56665544

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.79  E-value=0.061  Score=50.29  Aligned_cols=93  Identities=14%  Similarity=0.043  Sum_probs=58.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceE--eCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDF--INPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v--~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      +.+|+|+|+|.+|.+++..+...|. +|+++++++++.+.+. +++....  ++..+     . +.+.+...  ++|+|+
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d-----~-~~l~~~l~--~~DvVI   73 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND-----D-AALDAEVA--KHDLVI   73 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCTTC-----H-HHHHHHHT--TSSEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeecCC-----H-HHHHHHHc--CCcEEE
Confidence            5689999999999999998888898 8999999887766543 3332112  23332     1 22333332  699999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      +|++..........++..+ -.++..
T Consensus        74 n~a~~~~~~~i~~a~l~~g-~~vvd~   98 (450)
T 1ff9_A           74 SLIPYTFHATVIKSAIRQK-KHVVTT   98 (450)
T ss_dssp             ECCC--CHHHHHHHHHHHT-CEEEES
T ss_pred             ECCccccchHHHHHHHhCC-CeEEEe
Confidence            9998642223334455554 444443

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.79  E-value=0.027  Score=48.22  Aligned_cols=78  Identities=15%  Similarity=0.219  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-E--eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-F--INPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v--~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      .++++||+|+ +++|.++++.+...|+ +|++++++.++  ..++++... .  .|-.+  ..+....++....-.++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADVTD--EAAVASALDLAETMGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCTTC--HHHHHHHHHHHHHHSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhCCCCE
Confidence            4678999987 9999999999988999 99999875443  334455322 1  23332  1222222222111127999


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      +|++.|.
T Consensus        83 lv~nAg~   89 (257)
T 3tl3_A           83 VVNCAGT   89 (257)
T ss_dssp             EEECGGG
T ss_pred             EEECCCC
Confidence            9998873

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.79  E-value=0.0055  Score=54.40  Aligned_cols=97  Identities=15%  Similarity=0.179  Sum_probs=61.8

Q ss_pred             CCCCCEEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHhcCCc-eEe---C-CCCCCchhHHHHHHhhhCC
Q 019822          148 VEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKK-EKGKAFGMT-DFI---N-PDDEPNKSISELVKGITHG  220 (335)
Q Consensus       148 ~~~~~~VlI~G~g-~vG~~ai~la~~~G~~~V~~~~~~~~~~-~~~~~lga~-~v~---~-~~~~~~~~~~~~i~~~~~g  220 (335)
                      --.+.+++|+|+| .+|..+++++...|+ +|++++++..+. +...+++.. +..   . .+.   .+..+.++     
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~---~~L~e~l~-----  244 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSE---DLLKKCSL-----  244 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCCCCEEEEEEECCH---HHHHHHHH-----
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhhcccccccccccH---hHHHHHhc-----
Confidence            3478999999997 569999999999998 999998764332 122233321 100   0 100   22333333     


Q ss_pred             CCccEEEEcCCChHH-HHHHHHhhccCCeEEEEEccCC
Q 019822          221 MGVDYCFECTGVPSL-LSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       221 ~g~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                       .+|+||.+++.+.. +..  +.++++ ..+++++...
T Consensus       245 -~ADIVIsAtg~p~~vI~~--e~vk~G-avVIDVgi~r  278 (320)
T 1edz_A          245 -DSDVVITGVPSENYKFPT--EYIKEG-AVCINFACTK  278 (320)
T ss_dssp             -HCSEEEECCCCTTCCBCT--TTSCTT-EEEEECSSSC
T ss_pred             -cCCEEEECCCCCcceeCH--HHcCCC-eEEEEcCCCc
Confidence             58999999998743 322  236776 7888887753

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.79  E-value=0.027  Score=48.47  Aligned_cols=78  Identities=13%  Similarity=0.152  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW---KKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~---~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~  218 (335)
                      .++++||+|+ +++|.++++.+...|+ +|+.++++..   +.+.+    ++.+...   ..|-.+  ..+..+.+++..
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~   86 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN--EEEVAKLFDFAE   86 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS--HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHH
Confidence            5789999987 9999999999999999 9999876543   33222    2234322   123332  122333332221


Q ss_pred             --CCCCccEEEEcCC
Q 019822          219 --HGMGVDYCFECTG  231 (335)
Q Consensus       219 --~g~g~d~vid~~g  231 (335)
                        .+ ++|++|++.|
T Consensus        87 ~~~g-~iD~lvnnAg  100 (262)
T 3ksu_A           87 KEFG-KVDIAINTVG  100 (262)
T ss_dssp             HHHC-SEEEEEECCC
T ss_pred             HHcC-CCCEEEECCC
Confidence              13 6999999887

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.78  E-value=0.024  Score=50.37  Aligned_cols=75  Identities=20%  Similarity=0.158  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-----C--CceE--eCCCCCCchhHHHHHHhhh
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-----G--MTDF--INPDDEPNKSISELVKGIT  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-----g--a~~v--~~~~~~~~~~~~~~i~~~~  218 (335)
                      .++.+|||+|+ |.+|..++..+...|+ +|++++++.++.+.+.+.     +  ...+  .|-.+   .+   .+++..
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d---~~---~~~~~~   81 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK---QG---AYDEVI   81 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS---TT---TTTTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC---hH---HHHHHH
Confidence            45689999987 9999999999888899 999999988776544321     2  2212  13222   11   233333


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .  ++|+||++.+.
T Consensus        82 ~--~~d~vih~A~~   93 (342)
T 1y1p_A           82 K--GAAGVAHIASV   93 (342)
T ss_dssp             T--TCSEEEECCCC
T ss_pred             c--CCCEEEEeCCC
Confidence            2  69999998863

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.78  E-value=0.0077  Score=50.96  Aligned_cols=37  Identities=22%  Similarity=0.351  Sum_probs=32.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK  188 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~  188 (335)
                      ++++||+|+ |.+|.++++.+...|+ +|+++++++++.
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~   40 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQ   40 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCcccc
Confidence            568999987 9999999999999999 999999887653

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.78  E-value=0.027  Score=47.99  Aligned_cols=75  Identities=17%  Similarity=0.318  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhh--CCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGIT--HGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~g~d~  225 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|++++++++.    ++.+... ..|-.+  ..++.+.+++..  .+ ++|+
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~g-~id~   77 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVAD--AAQVAQVCQRLLAETE-RLDA   77 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTC--HHHHHHHHHHHHHHCS-CCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCC--HHHHHHHHHHHHHHcC-CCCE
Confidence            4678999987 9999999999999999 99999987653    2234222 123333  123333333321  13 6999


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      +|++.|.
T Consensus        78 lv~~Ag~   84 (250)
T 2fwm_X           78 LVNAAGI   84 (250)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9998873

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.77  E-value=0.02  Score=49.36  Aligned_cols=101  Identities=17%  Similarity=0.060  Sum_probs=64.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE--eCCCCCCchhHHHHHHhhhC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF--INPDDEPNKSISELVKGITH  219 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v--~~~~~~~~~~~~~~i~~~~~  219 (335)
                      +.....+.++.+||=+|+|+ |..++.+++. |+ +|++++.+++-.+.+++.-....  .+..+   .+.  .......
T Consensus        37 il~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~---~~~--~~~~~~~  108 (261)
T 3iv6_A           37 DIFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLD---ITA--EIPKELA  108 (261)
T ss_dssp             HHHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECC---TTS--CCCGGGT
T ss_pred             HHHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeee---ccc--ccccccC
Confidence            34566788999999999874 8888888874 77 99999999999988866432111  11111   000  0000112


Q ss_pred             CCCccEEEEcCC-----C---hHHHHHHHHhhccCCeEEEEE
Q 019822          220 GMGVDYCFECTG-----V---PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       220 g~g~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      + .||+|+....     .   ...+..+.+.+ ++ |+++..
T Consensus       109 ~-~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS  147 (261)
T 3iv6_A          109 G-HFDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS  147 (261)
T ss_dssp             T-CCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred             C-CccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence            2 7999986432     1   12566777788 97 988755

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.76  E-value=0.022  Score=49.50  Aligned_cols=81  Identities=20%  Similarity=0.256  Sum_probs=58.7

Q ss_pred             HhcC-CCCCCEEEEEcCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCC
Q 019822          144 KEAK-VEKGSSVAVLGLG-TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       144 ~~~~-~~~~~~VlI~G~g-~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      +..+ --.+++++|+|.| .+|..++.++...|+ +|+++.+..                      .++.+.++      
T Consensus       151 ~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t----------------------~~L~~~~~------  201 (288)
T 1b0a_A          151 ERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT----------------------KNLRHHVE------  201 (288)
T ss_dssp             HHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC----------------------SCHHHHHH------
T ss_pred             HHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCC-eEEEEeCCc----------------------hhHHHHhc------
Confidence            3343 4578999999986 589999999999999 998886322                      22434443      


Q ss_pred             CccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          222 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       222 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .+|+||.++|.+..+.  .+.++++ ..++++|..
T Consensus       202 ~ADIVI~Avg~p~lI~--~~~vk~G-avVIDVgi~  233 (288)
T 1b0a_A          202 NADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN  233 (288)
T ss_dssp             HCSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred             cCCEEEECCCCcCcCC--HHHcCCC-cEEEEccCC
Confidence            4899999999875432  2336776 888888865

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.76  E-value=0.045  Score=45.63  Aligned_cols=75  Identities=16%  Similarity=0.046  Sum_probs=54.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      +|+|+|+|.+|..+++.+...|. +|+++++++++.+.+. +.+... +..+.   .+ .+.+++. +-.++|+++-+++
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~-i~gd~---~~-~~~l~~a-~i~~ad~vi~~~~   74 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATI-IHGDG---SH-KEILRDA-EVSKNDVVVILTP   74 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEE-EESCT---TS-HHHHHHH-TCCTTCEEEECCS
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeE-EEcCC---CC-HHHHHhc-CcccCCEEEEecC
Confidence            58899999999999999999999 9999999999888764 456543 32222   11 1233332 2237899999998


Q ss_pred             ChH
Q 019822          232 VPS  234 (335)
Q Consensus       232 ~~~  234 (335)
                      ...
T Consensus        75 ~d~   77 (218)
T 3l4b_C           75 RDE   77 (218)
T ss_dssp             CHH
T ss_pred             CcH
Confidence            763

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.75  E-value=0.02  Score=48.50  Aligned_cols=79  Identities=20%  Similarity=0.238  Sum_probs=48.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ |.+|.++++.+...|+ +|+++ .+++++.+.+    ++.+... .  .|-.+  .....+.+++..  
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN--PEDVENMVKTAMDA   80 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTS--HHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHHh
Confidence            4678999987 9999999999999999 99988 5565554432    3334322 2  23332  122322232221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|++|++.|.
T Consensus        81 ~~-~~d~vi~~Ag~   93 (247)
T 2hq1_A           81 FG-RIDILVNNAGI   93 (247)
T ss_dssp             HS-CCCEEEECC--
T ss_pred             cC-CCCEEEECCCC
Confidence            12 69999998874

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.75  E-value=0.028  Score=48.64  Aligned_cols=78  Identities=21%  Similarity=0.268  Sum_probs=49.6

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhh--CCCC
Q 019822          147 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       147 ~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      ....+++|||+|+ +++|.++++.+...|+ +|+++++++++...    .... ..|-.+  ..+..+.+++..  .+ +
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~----~~~~~~~Dv~~--~~~v~~~~~~~~~~~g-~   81 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDVN----VSDHFKIDVTN--EEEVKEAVEKTTKKYG-R   81 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CTT----SSEEEECCTTC--HHHHHHHHHHHHHHHS-C
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhccC----ceeEEEecCCC--HHHHHHHHHHHHHHcC-C
Confidence            3457889999987 9999999999999999 99999987654311    1111 123332  122333232221  12 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|++|++.|.
T Consensus        82 iD~lv~nAg~   91 (269)
T 3vtz_A           82 IDILVNNAGI   91 (269)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999998873

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.74  E-value=0.031  Score=47.68  Aligned_cols=93  Identities=19%  Similarity=0.251  Sum_probs=57.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCC--CCccEEEE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHG--MGVDYCFE  228 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g--~g~d~vid  228 (335)
                      +++||+|+ |.+|.++++.+...|+ +|+++++++++.+.      ....|      -.-.+.++++...  .++|++|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~~~~D------l~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------DLSTA------EGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSH------HHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------ccccC------CCCHHHHHHHHHHhCCCCCEEEE
Confidence            46899987 9999999999988999 99999987654321      00001      1111223333221  26899999


Q ss_pred             cCCChH------------------HHHHHHHhhccC-CeEEEEEccCC
Q 019822          229 CTGVPS------------------LLSEALETTKVG-KGKVIVIGVGV  257 (335)
Q Consensus       229 ~~g~~~------------------~~~~~~~~l~~~-~G~~v~~g~~~  257 (335)
                      +.|...                  ..+.+++.+... .|+++.++...
T Consensus        69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence            887432                  123344444332 27999887654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.74  E-value=0.026  Score=48.85  Aligned_cols=96  Identities=17%  Similarity=0.203  Sum_probs=60.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          153 SVAVLGL-GTVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      +|||+|+ |.+|..+++.+...  |+ +|+++++++++.+.+...+...+ .|..+   .   +.+.+...  ++|+||+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d---~---~~~~~~~~--~~d~vi~   71 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYGD---E---AALTSALQ--GVEKLLL   71 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTTC---H---HHHHHHTT--TCSEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCCC---H---HHHHHHHh--CCCEEEE
Confidence            4899997 99999999988877  88 99999988877665554454332 23332   2   23444433  5899999


Q ss_pred             cCCCh-----HHHHHHHHhhccC-CeEEEEEccCC
Q 019822          229 CTGVP-----SLLSEALETTKVG-KGKVIVIGVGV  257 (335)
Q Consensus       229 ~~g~~-----~~~~~~~~~l~~~-~G~~v~~g~~~  257 (335)
                      +.+..     .....+++.+... -++++.++...
T Consensus        72 ~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           72 ISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             CC--------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             eCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            88742     1234444444332 15788887643

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.74  E-value=0.03  Score=48.07  Aligned_cols=93  Identities=11%  Similarity=-0.001  Sum_probs=61.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCC--------------------c--eEeCCCC
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGM--------------------T--DFINPDD  204 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga--------------------~--~v~~~~~  204 (335)
                      ..++.+||.+|+|. |..+..|++. |+ +|++++.|+.-.+.+++ .+.                    .  ..+..+ 
T Consensus        66 ~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D-  141 (252)
T 2gb4_A           66 GQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS-  141 (252)
T ss_dssp             TCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC-
T ss_pred             CCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc-
Confidence            45788999999874 7777777765 88 99999999998888753 321                    0  111111 


Q ss_pred             CCchhHHHHHHhhh--CCCCccEEEEcCCC--------hHHHHHHHHhhccCCeEEEEEc
Q 019822          205 EPNKSISELVKGIT--HGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       205 ~~~~~~~~~i~~~~--~g~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                               +.++.  ....||+|++...-        ...+..+.+.|+++ |+++++.
T Consensus       142 ---------~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~~  191 (252)
T 2gb4_A          142 ---------IFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVAV  191 (252)
T ss_dssp             ---------TTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             ---------cccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEEE
Confidence                     11121  11379999974321        12567788999998 9986553

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.73  E-value=0.041  Score=48.88  Aligned_cols=75  Identities=16%  Similarity=0.219  Sum_probs=48.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH--HHHHhcCC---ceEe--CCCCCCchhHHHHHHhhhCCCC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK--EKGKAFGM---TDFI--NPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~--~~~~~lga---~~v~--~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      +.+|||+|+ |.+|..+++.+...|+ +|+++++++++.  +.+++++.   -..+  |-.+  ...+.+.++..    +
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~----~   75 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLE--FSNIIRTIEKV----Q   75 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTC--HHHHHHHHHHH----C
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCC--HHHHHHHHHhc----C
Confidence            578999987 9999999998888899 999999876543  23444421   1122  2222  12222333322    5


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|+||++.+.
T Consensus        76 ~d~vih~A~~   85 (345)
T 2z1m_A           76 PDEVYNLAAQ   85 (345)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999998874

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.71  E-value=0.087  Score=47.41  Aligned_cols=133  Identities=15%  Similarity=0.148  Sum_probs=79.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-CCCEEE-EEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          152 SSVAVLGLGTVGLGAVDGARMH-GAAKII-GIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~-G~~~V~-~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      -+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|...   +.     ++.+.+.    ...+|+|+.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~lvav~d~~~~~~~~~~~~~g~~~---~~-----~~~~~l~----~~~~D~V~i   72 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKL-KLVTCYSRTEDKREKFGKRYNCAG---DA-----TMEALLA----REDVEMVII   72 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSE-EEEEEECSSHHHHHHHHHHHTCCC---CS-----SHHHHHH----CSSCCEEEE
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCCCC---cC-----CHHHHhc----CCCCCEEEE
Confidence            4789999999998877777665 67 655 557777776554 6677642   22     2333332    337999999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEEccCCC-cc-ccchhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCC
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AM-VPLNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~-~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~  301 (335)
                      |+......+.+..++..+  .-+++..+.. .. -...+.... .+++.+.-...  ......+..+.+++++|.+
T Consensus        73 ~tp~~~h~~~~~~al~~g--k~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~--~R~~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           73 TVPNDKHAEVIEQCARSG--KHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHS--SRRLGALRKMKEMIDTKEI  144 (354)
T ss_dssp             CSCTTSHHHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECG--GGGSHHHHHHHHHHHTTTT
T ss_pred             eCChHHHHHHHHHHHHcC--CEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeec--hhcCHHHHHHHHHHhcCCC
Confidence            999877778888888774  4456654432 00 001111111 23343332221  1223456778888998885

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.71  E-value=0.02  Score=51.25  Aligned_cols=89  Identities=20%  Similarity=0.340  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+++|.|+|.|.+|...++.++.+|. +|++.++++.+.+..+++|+..+    +     +.+.++      ..|+|+.+
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~----~-----l~ell~------~aDvV~l~  207 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQV----A-----CSELFA------SSDFILLA  207 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEEC----C-----HHHHHH------HCSEEEEC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCceeC----C-----HHHHHh------hCCEEEEc
Confidence            47899999999999999999999999 99999988755555555664211    1     222222      35666665


Q ss_pred             CCCh----HHH-HHHHHhhccCCeEEEEEcc
Q 019822          230 TGVP----SLL-SEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       230 ~g~~----~~~-~~~~~~l~~~~G~~v~~g~  255 (335)
                      +...    ..+ ...++.++++ ..++.++.
T Consensus       208 ~P~t~~t~~li~~~~l~~mk~g-ailIN~ar  237 (330)
T 4e5n_A          208 LPLNADTLHLVNAELLALVRPG-ALLVNPCR  237 (330)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCCHHHHHHhCHHHHhhCCCC-cEEEECCC
Confidence            5421    111 2455566665 66665554

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.71  E-value=0.12  Score=45.87  Aligned_cols=131  Identities=15%  Similarity=0.175  Sum_probs=79.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc-CCCEEE-EEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          153 SVAVLGLGTVGLGAVDGARMH-GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~-G~~~V~-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      +|.|+|+|.+|...+..++.. +. +++ +.++++++.+. ++++|..  +  .     ++.+.+.    ...+|+|+.|
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~--~--~-----~~~~~l~----~~~~D~V~i~   70 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYGCE--V--R-----TIDAIEA----AADIDAVVIC   70 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCE--E--C-----CHHHHHH----CTTCCEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhCCC--c--C-----CHHHHhc----CCCCCEEEEe
Confidence            688999999998877777665 66 665 56777777655 4667764  2  2     2333332    2379999999


Q ss_pred             CCChHHHHHHHHhhccCCeEEEEEccCCC-cccc-chhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCC
Q 019822          230 TGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVP-LNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~-~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~  301 (335)
                      +......+.+..++..+  .-+++..+.. .... ..+.... .+++.+.-...  ......+..+.+++++|++
T Consensus        71 tp~~~h~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~--~r~~p~~~~~~~~i~~g~i  141 (331)
T 4hkt_A           71 TPTDTHADLIERFARAG--KAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFN--RRFDPHFMAVRKAIDDGRI  141 (331)
T ss_dssp             SCGGGHHHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG--GGGCHHHHHHHHHHHTTTT
T ss_pred             CCchhHHHHHHHHHHcC--CcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEccc--ccCCHHHHHHHHHHHcCCC
Confidence            98877778888888774  5566654432 1000 1111111 23444432221  1123457778888999885

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=95.70  E-value=0.0036  Score=54.29  Aligned_cols=75  Identities=20%  Similarity=0.188  Sum_probs=48.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHH---HHHHhhhCCCCcc
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS---ELVKGITHGMGVD  224 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~---~~i~~~~~g~g~d  224 (335)
                      -.++++||+|+ |++|.++++.+...|+ +|++++++.++.+....+    ..|-.+  .....   +.+.+.. + ++|
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~--~~~~~~~~~~~~~~~-g-~iD   96 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLRE--AAYADGLPGAVAAGL-G-RLD   96 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTS--HHHHHHHHHHHHHHH-S-CCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCC--HHHHHHHHHHHHHhc-C-CCC
Confidence            35788999987 9999999999999999 999999876544322111    112222  11122   2222222 2 699


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      ++|++.|.
T Consensus        97 ~lvnnAg~  104 (266)
T 3uxy_A           97 IVVNNAGV  104 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998874

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.69  E-value=0.0088  Score=51.71  Aligned_cols=95  Identities=22%  Similarity=0.298  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHc---CCCEEEEEcCChhhHHHHHh----cCCc-e--EeCCCCCCchhHHHHHHhh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMH---GAAKIIGIDKNPWKKEKGKA----FGMT-D--FINPDDEPNKSISELVKGI  217 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~---G~~~V~~~~~~~~~~~~~~~----lga~-~--v~~~~~~~~~~~~~~i~~~  217 (335)
                      ++++.+||-+|+|+ |..+..+++..   |+ +|++++.+++-++.+++    .+.. .  ++..+          +.++
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D----------~~~~  135 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD----------IRDI  135 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC----------TTTC
T ss_pred             CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeecc----------cccc
Confidence            78999999999874 77888888864   56 99999999988877754    3322 1  22111          1122


Q ss_pred             hCCCCccEEEEcCCC--------hHHHHHHHHhhccCCeEEEEEccC
Q 019822          218 THGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       218 ~~g~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .- ..+|+|+....-        ...++.+.+.|+|+ |+++.....
T Consensus       136 ~~-~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~~  180 (261)
T 4gek_A          136 AI-ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEKF  180 (261)
T ss_dssp             CC-CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEB
T ss_pred             cc-cccccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEecc
Confidence            22 268988754321        13578899999998 999887543

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.68  E-value=0.15  Score=45.92  Aligned_cols=133  Identities=11%  Similarity=0.066  Sum_probs=79.7

Q ss_pred             CEEEEEcCCHHHH-HHHHHHHHc-CCCEEE-EEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          152 SSVAVLGLGTVGL-GAVDGARMH-GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       152 ~~VlI~G~g~vG~-~ai~la~~~-G~~~V~-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -+|.|+|+|.+|. ..+..++.. +. +++ +.++++++.+. ++++|....   .     ++.    ++.....+|+|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~~~~---~-----~~~----~ll~~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLT-EVTAIASRRWDRAKRFTERFGGEPV---E-----GYP----ALLERDDVDAVY   94 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTE-EEEEEEESSHHHHHHHHHHHCSEEE---E-----SHH----HHHTCTTCSEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCe-EEEEEEcCCHHHHHHHHHHcCCCCc---C-----CHH----HHhcCCCCCEEE
Confidence            4789999999998 556655555 67 665 55677666554 466776543   1     222    233334799999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEEccCCC-cccc-chhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCC
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVP-LNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~-~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~  301 (335)
                      .|+......+.+..++..+  +-|++..+.. .... ..+.... .+++.+.-...  ......+..+.+++++|++
T Consensus        95 i~tp~~~h~~~~~~al~aG--k~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~--~R~~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRAG--KHVLAEKPLTTDRPQAERLFAVARERGLLLMENFM--FLHHPQHRQVADMLDEGVI  167 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECG--GGGCTHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHCC--CcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEec--ccCCHHHHHHHHHHhcCCC
Confidence            9999887778888888774  5566765432 1000 1111111 23444432221  1223557788888998875

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.67  E-value=0.058  Score=48.18  Aligned_cols=74  Identities=18%  Similarity=0.260  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh----hHHHHHhc------CCceEe--CCCCCCchhHHHHHHh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW----KKEKGKAF------GMTDFI--NPDDEPNKSISELVKG  216 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~----~~~~~~~l------ga~~v~--~~~~~~~~~~~~~i~~  216 (335)
                      .+.+|||+|+ |.+|..+++.+...|. +|++++++..    ..+.+++.      .--.++  |-.+   .   +.+.+
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~---~~~~~   96 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD---L---TTCEQ   96 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC---H---HHHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC---H---HHHHH
Confidence            4679999997 9999999999998999 9999998543    33333332      211222  3322   2   23444


Q ss_pred             hhCCCCccEEEEcCCC
Q 019822          217 ITHGMGVDYCFECTGV  232 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~  232 (335)
                      ...  ++|+||++.+.
T Consensus        97 ~~~--~~d~Vih~A~~  110 (351)
T 3ruf_A           97 VMK--GVDHVLHQAAL  110 (351)
T ss_dssp             HTT--TCSEEEECCCC
T ss_pred             Hhc--CCCEEEECCcc
Confidence            443  69999999874

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.67  E-value=0.033  Score=49.45  Aligned_cols=93  Identities=10%  Similarity=0.025  Sum_probs=63.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhc-CCc-----eEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          152 SSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAF-GMT-----DFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~l-ga~-----~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      .+||++|+|. |..+..+++.. +. +|++++.+++-.+.+++. +..     .++.      .+..+.+++..+ ..||
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~------~Da~~~l~~~~~-~~fD  161 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRV------DDARMVAESFTP-ASRD  161 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEE------SCHHHHHHTCCT-TCEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEE------CcHHHHHhhccC-CCCC
Confidence            3999999864 77788888865 66 999999999988888663 211     1221      234444444333 3799


Q ss_pred             EEEE-cCCC---------hHHHHHHHHhhccCCeEEEEEc
Q 019822          225 YCFE-CTGV---------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       225 ~vid-~~g~---------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      +||- ....         ...++.+.+.|+++ |.++...
T Consensus       162 vIi~D~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~  200 (317)
T 3gjy_A          162 VIIRDVFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANC  200 (317)
T ss_dssp             EEEECCSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEe
Confidence            9984 3221         34678899999998 9887654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.67  E-value=0.016  Score=49.18  Aligned_cols=78  Identities=18%  Similarity=0.088  Sum_probs=47.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHH--HHHHhhh-CCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSIS--ELVKGIT-HGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~--~~i~~~~-~g~g~d~  225 (335)
                      .++++||+|+ |++|.++++.+.. |. +|+++++++++.+.+.+......+..+-   .+..  +.+.+.. .-.++|+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~id~   78 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIESDI---VKEVLEEGGVDKLKNLDHVDT   78 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEECCH---HHHHHTSSSCGGGTTCSCCSE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceeccc---chHHHHHHHHHHHHhcCCCCE
Confidence            4678999987 9999998887765 88 9999999998888776643222221111   1110  0011111 1126899


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      +|++.|.
T Consensus        79 lv~~Ag~   85 (245)
T 3e9n_A           79 LVHAAAV   85 (245)
T ss_dssp             EEECC--
T ss_pred             EEECCCc
Confidence            9998874

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.65  E-value=0.044  Score=48.98  Aligned_cols=89  Identities=18%  Similarity=0.239  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+.+|.|+|.|.+|...++.++..|. +|++.+++.++.+.+.++|...+    +     +.+.++      ..|+|+.+
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~----~-----l~e~l~------~aDvVi~~  217 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV----S-----TPELAA------QSDFIVVA  217 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC----C-----HHHHHH------HCSEEEEC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC----C-----HHHHHh------hCCEEEEe
Confidence            46789999999999999999999999 89999987766666666664321    2     222222      47888887


Q ss_pred             CCCh----HHH-HHHHHhhccCCeEEEEEcc
Q 019822          230 TGVP----SLL-SEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       230 ~g~~----~~~-~~~~~~l~~~~G~~v~~g~  255 (335)
                      +...    ..+ ...++.++++ ..++.++.
T Consensus       218 vp~~~~t~~~i~~~~~~~mk~g-ailIn~sr  247 (330)
T 2gcg_A          218 CSLTPATEGLCNKDFFQKMKET-AVFINISR  247 (330)
T ss_dssp             CCCCTTTTTCBSHHHHHHSCTT-CEEEECSC
T ss_pred             CCCChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence            7642    122 3456677775 66665544

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.63  E-value=0.073  Score=46.49  Aligned_cols=74  Identities=20%  Similarity=0.158  Sum_probs=52.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|...   ..     +..+.++      ..|+||-|+..
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~-----~~~~~~~------~~Dvvi~~vp~   66 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQV---VS-----SPADVAE------KADRIITMLPT   66 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEE---CS-----SHHHHHH------HCSEEEECCSS
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCee---cC-----CHHHHHh------cCCEEEEeCCC
Confidence            47899999999998888888898 8999999999888887766431   11     1222222      46888888865


Q ss_pred             hHHHHHHHH
Q 019822          233 PSLLSEALE  241 (335)
Q Consensus       233 ~~~~~~~~~  241 (335)
                      +...+..+.
T Consensus        67 ~~~~~~v~~   75 (296)
T 2gf2_A           67 SINAIEAYS   75 (296)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            545555544

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.63  E-value=0.05  Score=46.73  Aligned_cols=80  Identities=16%  Similarity=0.215  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHH-HhcCCceEe--CCCCCCchhHHHHHHhhhCC
Q 019822          150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNP---WKKEKG-KAFGMTDFI--NPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~---~~~~~~-~~lga~~v~--~~~~~~~~~~~~~i~~~~~g  220 (335)
                      .++++||+|+   |.+|.++++.+...|+ +|+.+++++   +..+.+ ++.+....+  |-.+  .....+.+++....
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAE--DASIDTMFAELGKV   84 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCC--HHHHHHHHHHHHHH
Confidence            4678999974   6999999999988999 999999876   233333 223422222  3333  12333333332211


Q ss_pred             -CCccEEEEcCCC
Q 019822          221 -MGVDYCFECTGV  232 (335)
Q Consensus       221 -~g~d~vid~~g~  232 (335)
                       .++|++|++.|.
T Consensus        85 ~g~iD~lv~~Ag~   97 (265)
T 1qsg_A           85 WPKFDGFVHSIGF   97 (265)
T ss_dssp             CSSEEEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             168999998873

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.63  E-value=0.039  Score=48.27  Aligned_cols=41  Identities=12%  Similarity=0.079  Sum_probs=35.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKKEKG  191 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~-~~~~~~~~~  191 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+.++ +++++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHH
Confidence            4678999987 9999999999999999 999999 888776543

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=95.61  E-value=0.033  Score=47.41  Aligned_cols=100  Identities=20%  Similarity=0.105  Sum_probs=68.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCC-ceEeCCCCCCchhHHHHHHhhhC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      +.......++.+||-+|+|. |..+..+++.. +. +|++++.+++..+.+++... ..++..+.   .       ++..
T Consensus        25 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~d~---~-------~~~~   92 (259)
T 2p35_A           25 LLAQVPLERVLNGYDLGCGP-GNSTELLTDRYGVN-VITGIDSDDDMLEKAADRLPNTNFGKADL---A-------TWKP   92 (259)
T ss_dssp             HHTTCCCSCCSSEEEETCTT-THHHHHHHHHHCTT-SEEEEESCHHHHHHHHHHSTTSEEEECCT---T-------TCCC
T ss_pred             HHHhcCCCCCCEEEEecCcC-CHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHhCCCcEEEECCh---h-------hcCc
Confidence            44556677889999999873 77788888776 55 99999999998888866421 12222221   1       1112


Q ss_pred             CCCccEEEEcCC------ChHHHHHHHHhhccCCeEEEEEc
Q 019822          220 GMGVDYCFECTG------VPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       220 g~g~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ...+|+|+....      -...+..+.+.|+++ |+++...
T Consensus        93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  132 (259)
T 2p35_A           93 AQKADLLYANAVFQWVPDHLAVLSQLMDQLESG-GVLAVQM  132 (259)
T ss_dssp             SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            237999996542      134567888899997 9988764

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.61  E-value=0.033  Score=49.49  Aligned_cols=98  Identities=14%  Similarity=0.049  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--------ceEeCCCCCCchhHHHHHHhhhCC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--------TDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga--------~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-.        ..+ ....   .+..+.+.. . .
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv-~~~~---~D~~~~l~~-~-~  179 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKL-DLFC---GDGFEFLKN-H-K  179 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTE-EEEC---SCHHHHHHH-C-T
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCE-EEEE---ChHHHHHHh-c-C
Confidence            4568999999864 6777788876654599999999998888865311        111 1111   233333433 2 3


Q ss_pred             CCccEEEEcCCC----------hHHHHHHHHhhccCCeEEEEEc
Q 019822          221 MGVDYCFECTGV----------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       221 ~g~d~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ..||+|+.....          ...++.+.+.|+++ |.++.-.
T Consensus       180 ~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          180 NEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             TCEEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             CCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            379999842211          34678889999997 9988764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.61  E-value=0.057  Score=48.00  Aligned_cols=77  Identities=23%  Similarity=0.222  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC---------ChhhHHH----HHhcCCceEeCCCCCCchhHHHHH-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK---------NPWKKEK----GKAFGMTDFINPDDEPNKSISELV-  214 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~---------~~~~~~~----~~~lga~~v~~~~~~~~~~~~~~i-  214 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++         +.++.+.    +++.+...+.|..+  ..+..+.+ 
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~--~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC--HHHHHHHHH
Confidence            4678999987 9999999999999999 9998643         4444433    23344444455443  12232333 


Q ss_pred             --HhhhCCCCccEEEEcCC
Q 019822          215 --KGITHGMGVDYCFECTG  231 (335)
Q Consensus       215 --~~~~~g~g~d~vid~~g  231 (335)
                        .+.. + ++|++|++.|
T Consensus        85 ~~~~~~-g-~iD~lVnnAG  101 (319)
T 1gz6_A           85 TALDTF-G-RIDVVVNNAG  101 (319)
T ss_dssp             HHHHHT-S-CCCEEEECCC
T ss_pred             HHHHHc-C-CCCEEEECCC
Confidence              3322 3 6999999887

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.61  E-value=0.039  Score=46.58  Aligned_cols=76  Identities=18%  Similarity=0.167  Sum_probs=48.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCce-E-e--CCCCCCchhHHHHHHhhh--C
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMTD-F-I--NPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lga~~-v-~--~~~~~~~~~~~~~i~~~~--~  219 (335)
                      +++||+|+ |.+|..+++.+...|+ +|+++ ++++++.+.+    ++.+... . +  |-.+  .....+.+++..  -
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE--AEAATALVHQAAEVL   78 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC--HHHHHHHHHHHHHhc
Confidence            57899987 9999999999998999 89888 8887766543    2234321 1 2  3332  122222222221  1


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      + ++|++|++.|
T Consensus        79 ~-~~d~li~~Ag   89 (245)
T 2ph3_A           79 G-GLDTLVNNAG   89 (245)
T ss_dssp             T-CCCEEEECCC
T ss_pred             C-CCCEEEECCC
Confidence            2 6999999887

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.61  E-value=0.056  Score=46.37  Aligned_cols=82  Identities=17%  Similarity=0.255  Sum_probs=52.5

Q ss_pred             CCCCCCEEEEEc-C--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceE--eCCCCCCchhHHHHHHhh
Q 019822          147 KVEKGSSVAVLG-L--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF--INPDDEPNKSISELVKGI  217 (335)
Q Consensus       147 ~~~~~~~VlI~G-~--g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~v--~~~~~~~~~~~~~~i~~~  217 (335)
                      ...++++|||+| +  +++|.++++.+...|+ +|+.+++++...+.+    ++.+....  .|-.+  ..+..+.+++.
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~   86 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVAD--DAQIDALFASL   86 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCC--HHHHHHHHHHH
Confidence            345788999997 4  6999999999999999 999998876544443    33342222  23332  22333333332


Q ss_pred             h--CCCCccEEEEcCCC
Q 019822          218 T--HGMGVDYCFECTGV  232 (335)
Q Consensus       218 ~--~g~g~d~vid~~g~  232 (335)
                      .  .+ ++|++|++.|.
T Consensus        87 ~~~~g-~id~lv~nAg~  102 (271)
T 3ek2_A           87 KTHWD-SLDGLVHSIGF  102 (271)
T ss_dssp             HHHCS-CEEEEEECCCC
T ss_pred             HHHcC-CCCEEEECCcc
Confidence            1  13 69999998873

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=95.60  E-value=0.11  Score=45.71  Aligned_cols=74  Identities=18%  Similarity=0.158  Sum_probs=51.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      ++|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+...        .+..+.+      +..|+||-|+.
T Consensus         4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~~Ga~~a--------~s~~e~~------~~~dvv~~~l~   68 (300)
T 3obb_A            4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAA--------RSARDAV------QGADVVISMLP   68 (300)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEEC--------SSHHHHH------TTCSEEEECCS
T ss_pred             CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHcCCEEc--------CCHHHHH------hcCCceeecCC
Confidence            478899999999987777777899 99999999999999988886422        1111111      14566666666


Q ss_pred             ChHHHHHHH
Q 019822          232 VPSLLSEAL  240 (335)
Q Consensus       232 ~~~~~~~~~  240 (335)
                      ..+..+..+
T Consensus        69 ~~~~v~~V~   77 (300)
T 3obb_A           69 ASQHVEGLY   77 (300)
T ss_dssp             CHHHHHHHH
T ss_pred             chHHHHHHH
Confidence            655544443

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.60  E-value=0.03  Score=47.62  Aligned_cols=79  Identities=20%  Similarity=0.210  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ ++++.+.+    ++.+... .  .|-.+  ..+..+.+++..  
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~   79 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD--ADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            4678999987 9999999999999999 8888765 44444433    3344332 2  23322  122333232221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|+++++.|.
T Consensus        80 ~g-~id~lv~nAg~   92 (246)
T 3osu_A           80 FG-SLDVLVNNAGI   92 (246)
T ss_dssp             HS-CCCEEEECCCC
T ss_pred             cC-CCCEEEECCCC
Confidence            12 69999998873

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.60  E-value=0.068  Score=46.61  Aligned_cols=97  Identities=15%  Similarity=0.164  Sum_probs=66.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHHHHhhhC
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      .+.++.+||-+|+| .|..+..+++..|+ +|++++.+++..+.+++    .|..   .++..+-   .++     .+ .
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~-----~~-~  147 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF---LEI-----PC-E  147 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT---TSC-----SS-C
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc---ccC-----CC-C
Confidence            77899999999987 47888888888788 99999999988777644    2321   1221111   000     01 1


Q ss_pred             CCCccEEEEcCCC------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          220 GMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       220 g~g~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ...+|+|+....-      ...+..+.+.|+++ |+++....
T Consensus       148 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          148 DNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            2379999864331      34678999999998 99887754

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=95.60  E-value=0.19  Score=44.96  Aligned_cols=133  Identities=10%  Similarity=0.104  Sum_probs=81.0

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHc-CCCEEEE-EcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          153 SVAVLGLGTVGLG-AVDGARMH-GAAKIIG-IDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       153 ~VlI~G~g~vG~~-ai~la~~~-G~~~V~~-~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      +|-|+|+|.+|.. .+...+.. ++ ++++ .++++++.+. ++++|...+++       ++.+.+.    ...+|+|+-
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y~-------d~~ell~----~~~iDaV~I   92 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAFG-------SYEEMLA----SDVIDAVYI   92 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEES-------SHHHHHH----CSSCSEEEE
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeeeC-------CHHHHhc----CCCCCEEEE
Confidence            7899999999975 45555544 67 6665 4566666544 57888776652       2333332    347999999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEEccCCC-cccc-chhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCC
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVP-LNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~-~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~  301 (335)
                      |+......+.+..++..  |+=|++.-+.. .... ..+.... .+++.+.-...  ......+..+.+++++|++
T Consensus        93 ~tP~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~--~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           93 PLPTSQHIEWSIKAADA--GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYM--ITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCG--GGGSHHHHHHHHHHHTTTT
T ss_pred             eCCCchhHHHHHHHHhc--CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeee--eecCHHHHHhhHhhhcCCC
Confidence            99888788888888877  46677766543 1111 1111111 23443332221  1123456778888999885

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.59  E-value=0.052  Score=47.44  Aligned_cols=80  Identities=14%  Similarity=0.156  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCC--CEEEEEcCChhhHHHHHh-c-----CCce-E--eCCCCCCchhHHHHHHhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGA--AKIIGIDKNPWKKEKGKA-F-----GMTD-F--INPDDEPNKSISELVKGI  217 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~--~~V~~~~~~~~~~~~~~~-l-----ga~~-v--~~~~~~~~~~~~~~i~~~  217 (335)
                      .++++||+|+ +++|.++++.+...|+  .+|+.+++++++.+.+.+ +     +... .  .|-.+  ..+..+.+++.
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~  109 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ--AEKIKPFIENL  109 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC--GGGHHHHHHTS
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHH
Confidence            4689999987 9999998877765554  289999999887766522 1     3221 1  23333  24444444443


Q ss_pred             hCC-CCccEEEEcCC
Q 019822          218 THG-MGVDYCFECTG  231 (335)
Q Consensus       218 ~~g-~g~d~vid~~g  231 (335)
                      ... .++|++|++.|
T Consensus       110 ~~~~g~iD~lVnnAG  124 (287)
T 3rku_A          110 PQEFKDIDILVNNAG  124 (287)
T ss_dssp             CGGGCSCCEEEECCC
T ss_pred             HHhcCCCCEEEECCC
Confidence            211 16999999887

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.59  E-value=0.076  Score=44.33  Aligned_cols=99  Identities=18%  Similarity=0.272  Sum_probs=65.8

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCC-ceEeCCCCCCchhHHHHHHhhhC
Q 019822          145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM-TDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga-~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      ...+.++.+||=+|+|..|..++.+++..+. +|++++.+++..+.+++    .+. ..++..+.   ..    +..+.+
T Consensus        50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~---~~----~~~~~~  121 (230)
T 3evz_A           50 KTFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG---GI----IKGVVE  121 (230)
T ss_dssp             HTTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS---CS----STTTCC
T ss_pred             HhhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc---hh----hhhccc
Confidence            3456789999999998568888888887666 99999999988777643    342 12332221   00    111222


Q ss_pred             CCCccEEEEcCCC-------------------------hHHHHHHHHhhccCCeEEEEE
Q 019822          220 GMGVDYCFECTGV-------------------------PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       220 g~g~d~vid~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~  253 (335)
                       ..+|+|+-....                         ...+..+.+.|+++ |+++.+
T Consensus       122 -~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  178 (230)
T 3evz_A          122 -GTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY  178 (230)
T ss_dssp             -SCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             -CceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence             379999943211                         33567788889997 998876

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.58  E-value=0.16  Score=45.63  Aligned_cols=133  Identities=16%  Similarity=0.160  Sum_probs=79.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc--CCCEEE-EEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          152 SSVAVLGLGTVGLGAVDGARMH--GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~--G~~~V~-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -+|.|+|+|.+|...+..++..  ++ +++ +.++++++.+. ++++|+ .++       .++.+.+.+    ..+|+|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~-~lvav~d~~~~~~~~~~~~~~~-~~~-------~~~~~ll~~----~~~D~V~   80 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRA-ELIDVCDIDPAALKAAVERTGA-RGH-------ASLTDMLAQ----TDADIVI   80 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHHCC-EEE-------SCHHHHHHH----CCCSEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCe-EEEEEEcCCHHHHHHHHHHcCC-cee-------CCHHHHhcC----CCCCEEE
Confidence            4799999999998877777665  67 655 66777777655 466776 333       223333332    3799999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEEccCCCccc--cchhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCC
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMV--PLNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~  301 (335)
                      .|+......+.+..++..+  .-+++..+.....  ...+.... .+++.+.-...  ......+..+.+++++|.+
T Consensus        81 i~tp~~~h~~~~~~al~~g--k~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~--~r~~p~~~~~k~~i~~g~i  153 (354)
T 3q2i_A           81 LTTPSGLHPTQSIECSEAG--FHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQ--NRRNATLQLLKRAMQEKRF  153 (354)
T ss_dssp             ECSCGGGHHHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCG--GGGSHHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHCC--CCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEc--ccCCHHHHHHHHHHhcCCC
Confidence            9998876777788888774  5566654432000  01111111 23443332221  1123357778888998885

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.56  E-value=0.032  Score=48.21  Aligned_cols=79  Identities=15%  Similarity=0.102  Sum_probs=50.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      .+++++||+|+ |++|.++++.+...|+ +|+++ .+++++.+.+    ++.+... .  .|-.+  ..+..+.+++.. 
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  100 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN--AADIAAMFSAVDR  100 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHH
Confidence            45678999987 9999999999999999 88666 7776665543    2334321 2  23332  122333332221 


Q ss_pred             -CCCCccEEEEcCC
Q 019822          219 -HGMGVDYCFECTG  231 (335)
Q Consensus       219 -~g~g~d~vid~~g  231 (335)
                       -+ ++|++|++.|
T Consensus       101 ~~g-~id~li~nAg  113 (272)
T 4e3z_A          101 QFG-RLDGLVNNAG  113 (272)
T ss_dssp             HHS-CCCEEEECCC
T ss_pred             hCC-CCCEEEECCC
Confidence             12 6999999877

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.55  E-value=0.055  Score=48.54  Aligned_cols=76  Identities=24%  Similarity=0.298  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHH-hcC---CceE-eCCCCCCchhHHHHHHhhhCCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGK-AFG---MTDF-INPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~-~lg---a~~v-~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      -.+.+|||+|+ |.+|..+++.+... |..+|+++++++.+.+.+. ++.   ...+ .|-.+   .   +.+++...  
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d---~---~~l~~~~~--   90 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD---L---ERLNYALE--   90 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC---H---HHHHHHTT--
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC---H---HHHHHHHh--
Confidence            45689999987 99999999888877 8669999999888766543 332   2111 23332   2   23444443  


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|+||++.+.
T Consensus        91 ~~D~Vih~Aa~  101 (344)
T 2gn4_A           91 GVDICIHAAAL  101 (344)
T ss_dssp             TCSEEEECCCC
T ss_pred             cCCEEEECCCC
Confidence            69999998874

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.55  E-value=0.027  Score=50.18  Aligned_cols=78  Identities=15%  Similarity=0.155  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHh-cCC-ceEeCCCCCCchhHHHHHHhhhCCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK----GKA-FGM-TDFINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~----~~~-lga-~~v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      .+.+|||+|+ |.+|..+++.+...|+ +|++++++.++.+.    +.+ .+. ...+..+-.+ .+   .+.++....+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~---~~~~~~~~~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD-ER---ALARIFDAHP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTC-HH---HHHHHHHHSC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCC-HH---HHHHHHhccC
Confidence            4568999987 9999999999999999 99999986544322    211 121 1222222101 22   2333222237


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|+||++.+.
T Consensus        79 ~d~vih~A~~   88 (341)
T 3enk_A           79 ITAAIHFAAL   88 (341)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECccc
Confidence            9999998874

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.55  E-value=0.037  Score=47.69  Aligned_cols=73  Identities=14%  Similarity=0.160  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhh--CCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGIT--HGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~g~d~  225 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++     .-.... ..|-.+  ..+..+.+++..  -+ ++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g-~iD~   77 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTN--PDQVKASIDHIFKEYG-SISV   77 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTC--HHHHHHHHHHHHHHHS-CCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCC--HHHHHHHHHHHHHHcC-CCCE
Confidence            4678999987 9999999999999999 99999987655     111211 123332  122333333221  12 6999


Q ss_pred             EEEcCC
Q 019822          226 CFECTG  231 (335)
Q Consensus       226 vid~~g  231 (335)
                      +|++.|
T Consensus        78 lv~~Ag   83 (264)
T 2dtx_A           78 LVNNAG   83 (264)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=95.54  E-value=0.041  Score=46.88  Aligned_cols=79  Identities=16%  Similarity=0.197  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHhc--CCc-eE--eCCCCCCc-hhHHHHHH---hh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP--WKKEKGKAF--GMT-DF--INPDDEPN-KSISELVK---GI  217 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~--~~~~~~~~l--ga~-~v--~~~~~~~~-~~~~~~i~---~~  217 (335)
                      +++++||+|+ |.+|.++++.+...|+++|+++++++  +..+.+++.  +.. ..  .|-.+  . ....+.++   +.
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV--PVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS--CHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCC--ChHHHHHHHHHHHHh
Confidence            4678999987 99999999999999994488888775  333444332  211 12  23332  1 22222222   22


Q ss_pred             hCCCCccEEEEcCCC
Q 019822          218 THGMGVDYCFECTGV  232 (335)
Q Consensus       218 ~~g~g~d~vid~~g~  232 (335)
                      . + ++|++|++.|.
T Consensus        82 ~-g-~id~lv~~Ag~   94 (254)
T 1sby_A           82 L-K-TVDILINGAGI   94 (254)
T ss_dssp             H-S-CCCEEEECCCC
T ss_pred             c-C-CCCEEEECCcc
Confidence            2 2 69999998873

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.54  E-value=0.022  Score=48.82  Aligned_cols=78  Identities=21%  Similarity=0.297  Sum_probs=49.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcC--CCEEEEEcCChhhHHHH-HhcCCce---EeCCCCCCchhHHHHHHhhh--CCC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHG--AAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGIT--HGM  221 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G--~~~V~~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~  221 (335)
                      ++++||+|+ +++|.+.++.+...|  + +|+.+++++++.+.+ ++++...   ..|-.+  ..+..+.+++..  .+ 
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g-   77 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITE--DSVLKQLVNAAVKGHG-   77 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTS--HHHHHHHHHHHHHHHS-
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHhcC-
Confidence            578999987 999999887776654  6 899999998887665 3344221   123333  122322232221  13 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|+++++.|.
T Consensus        78 ~id~lvnnAg~   88 (254)
T 3kzv_A           78 KIDSLVANAGV   88 (254)
T ss_dssp             CCCEEEEECCC
T ss_pred             CccEEEECCcc
Confidence            69999998874

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=95.52  E-value=0.041  Score=47.85  Aligned_cols=85  Identities=14%  Similarity=0.058  Sum_probs=55.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      +|.|+|+|.+|...+..+.. |. +|+++++++++.+.+.+.|... .+ .    .       +..  ...|+||.|+..
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~-~~-~----~-------~~~--~~~D~vi~~v~~   65 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSE-AV-P----L-------ERV--AEARVIFTCLPT   65 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCE-EC-C----G-------GGG--GGCSEEEECCSS
T ss_pred             eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCcc-cC-H----H-------HHH--hCCCEEEEeCCC
Confidence            58899999999998887777 98 8999999988887776655432 21 1    1       111  157888888876


Q ss_pred             hHHHHHHHH----hhccCCeEEEEEcc
Q 019822          233 PSLLSEALE----TTKVGKGKVIVIGV  255 (335)
Q Consensus       233 ~~~~~~~~~----~l~~~~G~~v~~g~  255 (335)
                      +..+...++    .+.++ ..++.++.
T Consensus        66 ~~~~~~v~~~l~~~l~~~-~~vv~~s~   91 (289)
T 2cvz_A           66 TREVYEVAEALYPYLREG-TYWVDATS   91 (289)
T ss_dssp             HHHHHHHHHHHTTTCCTT-EEEEECSC
T ss_pred             hHHHHHHHHHHHhhCCCC-CEEEECCC
Confidence            643444433    34443 45555543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.52  E-value=0.052  Score=45.81  Aligned_cols=78  Identities=15%  Similarity=0.123  Sum_probs=50.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCC------EEEEEcCChhhHHHHH-h---cCCc-eE--eCCCCCCchhHHHHHHh
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAA------KIIGIDKNPWKKEKGK-A---FGMT-DF--INPDDEPNKSISELVKG  216 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~------~V~~~~~~~~~~~~~~-~---lga~-~v--~~~~~~~~~~~~~~i~~  216 (335)
                      ++++||+|+ |.+|.++++.+...|+.      +|+++++++++.+.+. +   .+.. ..  .|-.+  ...+...+++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD--MADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS--HHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCC--HHHHHHHHHH
Confidence            467999987 99999999888888875      7999999887766542 2   2322 12  23332  1223333332


Q ss_pred             hh--CCCCccEEEEcCC
Q 019822          217 IT--HGMGVDYCFECTG  231 (335)
Q Consensus       217 ~~--~g~g~d~vid~~g  231 (335)
                      ..  .+ ++|++|++.|
T Consensus        80 ~~~~~g-~id~li~~Ag   95 (244)
T 2bd0_A           80 IVERYG-HIDCLVNNAG   95 (244)
T ss_dssp             HHHHTS-CCSEEEECCC
T ss_pred             HHHhCC-CCCEEEEcCC
Confidence            21  12 6999999887

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.51  E-value=0.043  Score=52.17  Aligned_cols=79  Identities=15%  Similarity=0.246  Sum_probs=52.1

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-------HHHHHhcCCce-E--eCCCCCCchhHHHHHHh
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-------KEKGKAFGMTD-F--INPDDEPNKSISELVKG  216 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~-------~~~~~~lga~~-v--~~~~~~~~~~~~~~i~~  216 (335)
                      +.++.++||+|+ |.+|..++..+...|+++|+.+.++...       .+.+++.|... +  .|-.+  ...+.+.+.+
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd--~~~v~~~~~~  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE--RDALAALVTA  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSC--HHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCC--HHHHHHHHhc
Confidence            467889999986 9999999998888898678888887632       12334456432 2  23332  1223333332


Q ss_pred             hhCCCCccEEEEcCCC
Q 019822          217 ITHGMGVDYCFECTGV  232 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~  232 (335)
                         + .+|.||++.|.
T Consensus       334 ---~-~ld~VVh~AGv  345 (511)
T 2z5l_A          334 ---Y-PPNAVFHTAGI  345 (511)
T ss_dssp             ---S-CCSEEEECCCC
T ss_pred             ---C-CCcEEEECCcc
Confidence               3 79999998873

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=95.51  E-value=0.097  Score=47.09  Aligned_cols=98  Identities=17%  Similarity=0.159  Sum_probs=60.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH--HHHHhc-CCceE-eC-CCCCCchhHHHHHHhhhCCCCcc
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK--EKGKAF-GMTDF-IN-PDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~--~~~~~l-ga~~v-~~-~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      +.+|||+|+ |.+|..+++.+...|. +|+++++++++.  +.+.+. +...+ .| ..+   .+   .+.+...  ++|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d---~~---~l~~~~~--~~d   75 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN---VP---LMDTLFE--GAH   75 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTSTTEEEEESCCTTC---HH---HHHHHHT--TCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhcCCcEEEECCccCC---HH---HHHHHHh--cCC
Confidence            467999997 9999999988888898 899999887654  333333 33222 23 222   22   2333333  589


Q ss_pred             EEEEcCCCh-----HHHHHHHHhhccCC--eEEEEEccCC
Q 019822          225 YCFECTGVP-----SLLSEALETTKVGK--GKVIVIGVGV  257 (335)
Q Consensus       225 ~vid~~g~~-----~~~~~~~~~l~~~~--G~~v~~g~~~  257 (335)
                      +||.+.+..     .....+++.....+  +++|.++...
T Consensus        76 ~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           76 LAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             EEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred             EEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence            999766532     11244444444321  4888887653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.50  E-value=0.026  Score=48.38  Aligned_cols=74  Identities=23%  Similarity=0.229  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhh--CCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGIT--HGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~--~g~g~d~  225 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.     ... ..|-.+  ..+..+.+++..  .+ ++|+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d--~~~v~~~~~~~~~~~g-~iD~   90 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITD--TEQVEQAYKEIEETHG-PVEV   90 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTS--HHHHHHHHHHHHHHTC-SCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCC--HHHHHHHHHHHHHHcC-CCCE
Confidence            4678999987 9999999999999999 99999987655332     111 123332  122333333221  13 6899


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      +|++.|.
T Consensus        91 lv~nAg~   97 (253)
T 2nm0_A           91 LIANAGV   97 (253)
T ss_dssp             EEEECSC
T ss_pred             EEECCCC
Confidence            9998763

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.49  E-value=0.03  Score=47.26  Aligned_cols=77  Identities=17%  Similarity=0.238  Sum_probs=49.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHHHH----HhcCCce-E--eCCCCCCchhHHHHHHhhh--C
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIG-IDKNPWKKEKG----KAFGMTD-F--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~-~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      ++++||+|+ |.+|..+++.+...|+ +|++ ..+++++.+.+    ++.+... .  .|-.+  ..++.+.+++..  .
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK--EADVEAMMKTAIDAW   77 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS--HHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence            467899987 9999999999999999 8888 47887665543    2234321 1  23332  123333333221  1


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      + ++|++|++.|
T Consensus        78 g-~id~li~~Ag   88 (244)
T 1edo_A           78 G-TIDVVVNNAG   88 (244)
T ss_dssp             S-CCSEEEECCC
T ss_pred             C-CCCEEEECCC
Confidence            2 6999999887

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.48  E-value=0.051  Score=44.40  Aligned_cols=62  Identities=21%  Similarity=0.357  Sum_probs=43.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      ++||+|+ |.+|..+++.+. .|+ +|++++++++          ....|-.+  +....+.++++  + ++|++|++.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~--~~~~~~~~~~~--~-~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN--IDSIKKMYEQV--G-KVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC--HHHHHHHHHHH--C-CEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC--HHHHHHHHHHh--C-CCCEEEECCC
Confidence            7999987 999999999888 899 9999998754          12233333  12233334333  2 6899999887

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.48  E-value=0.049  Score=46.69  Aligned_cols=79  Identities=20%  Similarity=0.378  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHH-HhcCCceE--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPW---KKEKG-KAFGMTDF--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~~---~~~~~-~~lga~~v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+   |.+|.++++.+...|+ +|++++++++   ..+.+ ++.+....  .|-.+  ..+..+.+++..  
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   83 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQ--DEELDALFAGVKEA   83 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCC--HHHHHHHHHHHHHH
Confidence            4678999985   6999999998888899 9999998875   23333 22342222  23332  122333333221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -+ ++|++|++.|.
T Consensus        84 ~g-~iD~lv~~Ag~   96 (261)
T 2wyu_A           84 FG-GLDYLVHAIAF   96 (261)
T ss_dssp             HS-SEEEEEECCCC
T ss_pred             cC-CCCEEEECCCC
Confidence            12 69999998873

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.47  E-value=0.043  Score=50.55  Aligned_cols=83  Identities=20%  Similarity=0.193  Sum_probs=52.6

Q ss_pred             cCC-CCCCEEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCChhhH----------------HHHHhcCCce-E--eCCC
Q 019822          146 AKV-EKGSSVAVLGL-GTVGLGAVDGARM-HGAAKIIGIDKNPWKK----------------EKGKAFGMTD-F--INPD  203 (335)
Q Consensus       146 ~~~-~~~~~VlI~G~-g~vG~~ai~la~~-~G~~~V~~~~~~~~~~----------------~~~~~lga~~-v--~~~~  203 (335)
                      ..+ +.++++||+|+ +++|++.+..+.. .|+ +|++++++++..                +.+++.|... .  .|-.
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            344 45788999987 8999998888877 999 999888765321                3445566432 2  2333


Q ss_pred             CCCchhHHH---HHHhhhCCCCccEEEEcCCC
Q 019822          204 DEPNKSISE---LVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       204 ~~~~~~~~~---~i~~~~~g~g~d~vid~~g~  232 (335)
                      +  +....+   .+.+..+| ++|+++++.|.
T Consensus       134 d--~~~v~~~v~~i~~~~~G-~IDiLVNNAG~  162 (422)
T 3s8m_A          134 S--DAARAQVIELIKTEMGG-QVDLVVYSLAS  162 (422)
T ss_dssp             S--HHHHHHHHHHHHHHSCS-CEEEEEECCCC
T ss_pred             C--HHHHHHHHHHHHHHcCC-CCCEEEEcCcc
Confidence            2  122322   33333324 79999998765

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.47  E-value=0.059  Score=46.00  Aligned_cols=101  Identities=19%  Similarity=0.220  Sum_probs=67.4

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc--eEeCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT--DFINPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~--~v~~~~~~~~~~~~~~i~  215 (335)
                      +.......++.+||-+|+| .|..+..+++. +. +|++++.+++..+.+++.    +..  ..+..+.   .++     
T Consensus        29 l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~l-----   97 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQM-----   97 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CC-----
T ss_pred             HHHHhCCCCCCEEEEEeCC-CCHHHHHHHHh-CC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH---HhC-----
Confidence            4455677889999999987 47777777765 45 999999999888776542    322  1221111   100     


Q ss_pred             hhhCCCCccEEEEcCCC------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          216 GITHGMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .+ ....||+|+....-      ...+..+.+.|+++ |+++....
T Consensus        98 ~~-~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~~  141 (260)
T 1vl5_A           98 PF-TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVDN  141 (260)
T ss_dssp             CS-CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CC-CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEEc
Confidence            11 22379999975432      34678999999998 99988643

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=95.46  E-value=0.07  Score=46.80  Aligned_cols=68  Identities=15%  Similarity=0.071  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-------CCceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-------GMTDFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-------ga~~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      -++|.|+|+|.+|...++.+. .|+ +|++.++++++.+.+.+.       ++.. .  .+     .    .+   -++.
T Consensus        12 ~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~~~~~~~~~~~~l~~~~~~~i~~-~--~~-----~----~~---~~~a   74 (293)
T 1zej_A           12 HMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDVSEKALEAAREQIPEELLSKIEF-T--TT-----L----EK---VKDC   74 (293)
T ss_dssp             CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECSCHHHHHHHHHHSCGGGGGGEEE-E--SS-----C----TT---GGGC
T ss_pred             CCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHHHhCCeEE-e--CC-----H----HH---HcCC
Confidence            478999999999998888888 999 999999999998887654       2211 1  11     1    01   1268


Q ss_pred             cEEEEcCCChHH
Q 019822          224 DYCFECTGVPSL  235 (335)
Q Consensus       224 d~vid~~g~~~~  235 (335)
                      |+||.++.....
T Consensus        75 DlVieavpe~~~   86 (293)
T 1zej_A           75 DIVMEAVFEDLN   86 (293)
T ss_dssp             SEEEECCCSCHH
T ss_pred             CEEEEcCcCCHH
Confidence            999999987643

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.46  E-value=0.028  Score=48.46  Aligned_cols=79  Identities=13%  Similarity=0.199  Sum_probs=50.8

Q ss_pred             CCCEEEEEc---CCHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHH-HhcCCc--e-EeCCCCCCchhHHHHHHhh---h
Q 019822          150 KGSSVAVLG---LGTVGLGAVDGARMHGAAKIIGIDKNPWK-KEKG-KAFGMT--D-FINPDDEPNKSISELVKGI---T  218 (335)
Q Consensus       150 ~~~~VlI~G---~g~vG~~ai~la~~~G~~~V~~~~~~~~~-~~~~-~~lga~--~-v~~~~~~~~~~~~~~i~~~---~  218 (335)
                      +++++||+|   +|++|.++++.+...|+ +|+.+++++++ .+.+ ++++..  . ..|-.+  ..+..+.+++.   .
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN--EEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCC--HHHHHHHHHHHHHHh
Confidence            468899997   48999999999999999 99999988765 2433 444422  1 134333  12233333322   2


Q ss_pred             C-CCCccEEEEcCC
Q 019822          219 H-GMGVDYCFECTG  231 (335)
Q Consensus       219 ~-g~g~d~vid~~g  231 (335)
                      + +.++|++|++.|
T Consensus        83 g~~~~iD~lv~nAg   96 (269)
T 2h7i_A           83 GAGNKLDGVVHSIG   96 (269)
T ss_dssp             CTTCCEEEEEECCC
T ss_pred             CCCCCceEEEECCc
Confidence            2 126999999887

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=95.45  E-value=0.14  Score=42.17  Aligned_cols=99  Identities=14%  Similarity=0.087  Sum_probs=65.8

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC--ceEeCCCCCCchhHHHHHHhhhC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM--TDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      +.......++.+||-+|+|. |..+..+++. +. +|++++.+++..+.+++.-.  ..++..+-   .       ++..
T Consensus        37 ~l~~~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~---~-------~~~~  103 (220)
T 3hnr_A           37 ILEDVVNKSFGNVLEFGVGT-GNLTNKLLLA-GR-TVYGIEPSREMRMIAKEKLPKEFSITEGDF---L-------SFEV  103 (220)
T ss_dssp             HHHHHHHTCCSEEEEECCTT-SHHHHHHHHT-TC-EEEEECSCHHHHHHHHHHSCTTCCEESCCS---S-------SCCC
T ss_pred             HHHHhhccCCCeEEEeCCCC-CHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHhCCCceEEEeCCh---h-------hcCC
Confidence            34444556889999999864 6677777775 77 99999999998888865422  12222221   1       1111


Q ss_pred             CCCccEEEEcCC-----Ch---HHHHHHHHhhccCCeEEEEEc
Q 019822          220 GMGVDYCFECTG-----VP---SLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       220 g~g~d~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ...+|+|+....     .+   ..+..+.+.|+++ |+++...
T Consensus       104 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  145 (220)
T 3hnr_A          104 PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKG-GKIVFAD  145 (220)
T ss_dssp             CSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             CCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            137999986432     11   1678889999998 9988875

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.45  E-value=0.078  Score=45.40  Aligned_cols=35  Identities=26%  Similarity=0.324  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      .+.+|+|+|+|++|..++..+...|.+++..++.+
T Consensus        27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35799999999999999999999999899998754

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.44  E-value=0.057  Score=42.58  Aligned_cols=101  Identities=19%  Similarity=0.164  Sum_probs=63.2

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      ..++++||-+|+|. |..+..+++..|. .++++++.++ ..+.    ....++..+. ......+.+........+|+|
T Consensus        20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~-~~~~~~~~~~~~~~~~~~D~i   92 (180)
T 1ej0_A           20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDF-RDELVMKALLERVGDSKVQVV   92 (180)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCT-TSHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEccc-ccchhhhhhhccCCCCceeEE
Confidence            67889999999876 8888888888642 3999999876 3221    1112222221 012222233332333479999


Q ss_pred             EEc-----CCC------------hHHHHHHHHhhccCCeEEEEEccC
Q 019822          227 FEC-----TGV------------PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       227 id~-----~g~------------~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +..     .+.            ...+..+.+.|+++ |+++.....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  138 (180)
T 1ej0_A           93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVFQ  138 (180)
T ss_dssp             EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEES
T ss_pred             EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            962     222            24678888999997 998876543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.44  E-value=0.048  Score=48.67  Aligned_cols=41  Identities=12%  Similarity=0.079  Sum_probs=35.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKKEKG  191 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~-~~~~~~~~~  191 (335)
                      .++++||+|+ |++|.++++.+...|+ +|++++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence            4678999987 9999999999999999 999999 888776554

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=95.43  E-value=0.12  Score=47.51  Aligned_cols=102  Identities=14%  Similarity=0.148  Sum_probs=70.6

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCC
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      .+...+.++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++.+.........   .+....+. ..++ .
T Consensus       100 ~~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~---~~~~~~l~-~~~~-~  171 (416)
T 4e2x_A          100 LATELTGPDPFIVEIGCND-GIMLRTIQE-AGV-RHLGFEPSSGVAAKAREKGIRVRTDFFE---KATADDVR-RTEG-P  171 (416)
T ss_dssp             HHTTTCSSSCEEEEETCTT-TTTHHHHHH-TTC-EEEEECCCHHHHHHHHTTTCCEECSCCS---HHHHHHHH-HHHC-C
T ss_pred             HHHhCCCCCCEEEEecCCC-CHHHHHHHH-cCC-cEEEECCCHHHHHHHHHcCCCcceeeec---hhhHhhcc-cCCC-C
Confidence            3445567889999999864 666666665 477 9999999999999998887654433322   23333332 1223 7


Q ss_pred             ccEEEEcCC------ChHHHHHHHHhhccCCeEEEEE
Q 019822          223 VDYCFECTG------VPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       223 ~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ||+|+....      -...+..+.+.|+++ |+++..
T Consensus       172 fD~I~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~  207 (416)
T 4e2x_A          172 ANVIYAANTLCHIPYVQSVLEGVDALLAPD-GVFVFE  207 (416)
T ss_dssp             EEEEEEESCGGGCTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEEECChHHhcCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            999996433      134678899999997 998875

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.43  E-value=0.05  Score=49.00  Aligned_cols=90  Identities=19%  Similarity=0.337  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+.+|.|+|.|.+|...++.++..|. +|++.+++.++. ..+++|+..+        .++.+.++      ..|+|+.+
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~--------~~l~ell~------~aDvV~l~  230 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV--------STLQDLLF------HSDCVTLH  230 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC--------SSHHHHHH------HCSEEEEC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcchh-hHhhcCCeec--------CCHHHHHh------cCCEEEEc
Confidence            57899999999999999999999999 999999765542 2345565321        11222222      36777766


Q ss_pred             CCCh----HHH-HHHHHhhccCCeEEEEEccC
Q 019822          230 TGVP----SLL-SEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       230 ~g~~----~~~-~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +...    ..+ ...++.++++ ..++.++..
T Consensus       231 ~P~t~~t~~li~~~~l~~mk~g-ailIN~arg  261 (347)
T 1mx3_A          231 CGLNEHNHHLINDFTVKQMRQG-AFLVNTARG  261 (347)
T ss_dssp             CCCCTTCTTSBSHHHHTTSCTT-EEEEECSCT
T ss_pred             CCCCHHHHHHhHHHHHhcCCCC-CEEEECCCC
Confidence            5432    112 3455666665 666666544

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.42  E-value=0.049  Score=50.84  Aligned_cols=104  Identities=14%  Similarity=0.133  Sum_probs=70.8

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHH-cCC--CEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCC
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARM-HGA--AKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~-~G~--~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .++....+|||+|+|+||..++.++.. .+.  ..|++++..+.+.+..+.+|.... ..-+.   .+..+.+.++..+ 
T Consensus         8 ~~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vda---dnv~~~l~aLl~~-   83 (480)
T 2ph5_A            8 KKILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITP---QNYLEVIGSTLEE-   83 (480)
T ss_dssp             TCBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCT---TTHHHHTGGGCCT-
T ss_pred             ceecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccc---hhHHHHHHHHhcC-
Confidence            345667789999999999999888764 444  368888877666565666664322 22222   4455566666654 


Q ss_pred             CccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          222 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       222 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      + |+|++++-....+..+-.|+..+ -.+++...
T Consensus        84 ~-DvVIN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           84 N-DFLIDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             T-CEEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             C-CEEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence            4 99999776554566777778886 67777764

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.41  E-value=0.18  Score=45.12  Aligned_cols=133  Identities=16%  Similarity=0.179  Sum_probs=79.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc-CCCEEE-EEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          153 SVAVLGLGTVGLGAVDGARMH-GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~-G~~~V~-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      +|.|+|+|.+|...+..++.. +. +++ +.++++++.+. ++++|...++       .++.+.+.    ...+|+|+.|
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~~ll~----~~~~D~V~i~   71 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLGVEKAY-------KDPHELIE----DPNVDAVLVC   71 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHTCSEEE-------SSHHHHHH----CTTCCEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhCCCcee-------CCHHHHhc----CCCCCEEEEc
Confidence            688999999998876666554 56 665 56777777554 4667765444       22333332    2379999999


Q ss_pred             CCChHHHHHHHHhhccCCeEEEEEccCCC-ccc-cchhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCC
Q 019822          230 TGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV-PLNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~-~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~  301 (335)
                      +......+.+..++..+  .-+++..+.. ... ...+.... .+++.+.-...  ......+..+.+++++|.+
T Consensus        72 tp~~~h~~~~~~al~~g--k~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~--~R~~p~~~~~k~~i~~G~i  142 (344)
T 3ezy_A           72 SSTNTHSELVIACAKAK--KHVFCEKPLSLNLADVDRMIEETKKADVILFTGFN--RRFDRNFKKLKEAVENGTI  142 (344)
T ss_dssp             SCGGGHHHHHHHHHHTT--CEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECG--GGGCHHHHHHHHHHHTTTT
T ss_pred             CCCcchHHHHHHHHhcC--CeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeec--ccCCHHHHHHHHHHHcCCC
Confidence            99887777888888774  4455654432 100 01111111 23443332221  1223456778888998875

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.41  E-value=0.1  Score=49.41  Aligned_cols=82  Identities=18%  Similarity=0.260  Sum_probs=53.4

Q ss_pred             CCC--CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-------hHHHHHhcCCceE---eCCCCCCchhHHHHHH
Q 019822          149 EKG--SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW-------KKEKGKAFGMTDF---INPDDEPNKSISELVK  215 (335)
Q Consensus       149 ~~~--~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~-------~~~~~~~lga~~v---~~~~~~~~~~~~~~i~  215 (335)
                      .++  .++||+|+ |++|..+++.+...|+++|+.+.++..       -.+.+++.|....   .|-.+  .....+.+.
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd--~~~v~~~~~  312 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAAD--REALAALLA  312 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHH
Confidence            445  89999986 999999999888889878888887632       1233455665322   23332  233444444


Q ss_pred             hhhCCCCccEEEEcCCC
Q 019822          216 GITHGMGVDYCFECTGV  232 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~  232 (335)
                      +.....++|.||++.|.
T Consensus       313 ~i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          313 ELPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             TCCTTSCEEEEEECCCC
T ss_pred             HHHHhCCCeEEEECCcc
Confidence            44332379999998874

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=95.40  E-value=0.086  Score=45.10  Aligned_cols=85  Identities=13%  Similarity=0.214  Sum_probs=60.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      -+|.|+|+|.+|...+..+...|. +|.+.++++++.+.+. ++|...   ..     +..+.++      +.|+|+.|+
T Consensus         4 m~i~iiG~G~mG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~g~~~---~~-----~~~~~~~------~~D~Vi~~v   68 (259)
T 2ahr_A            4 MKIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPY---AM-----SHQDLID------QVDLVILGI   68 (259)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCB---CS-----SHHHHHH------TCSEEEECS
T ss_pred             cEEEEECCCHHHHHHHHHHHhCCC-eEEEECCCHHHHHHHHHHcCCEe---eC-----CHHHHHh------cCCEEEEEe
Confidence            378999999999998888888887 9999999998877664 457531   11     2222222      589999999


Q ss_pred             CChHHHHHHHHhhccCCeEEEEE
Q 019822          231 GVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       231 g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ... .....+..+.++ ..++..
T Consensus        69 ~~~-~~~~v~~~l~~~-~~vv~~   89 (259)
T 2ahr_A           69 KPQ-LFETVLKPLHFK-QPIISM   89 (259)
T ss_dssp             CGG-GHHHHHTTSCCC-SCEEEC
T ss_pred             CcH-hHHHHHHHhccC-CEEEEe
Confidence            844 566777777654 445444

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.40  E-value=0.021  Score=47.86  Aligned_cols=97  Identities=16%  Similarity=0.123  Sum_probs=67.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      ..++.+||-+|+|. |..+..+++. |. +|++++.++...+.+++... ..++..+-   .+   .+ .+.....||+|
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~---~~---~~-~~~~~~~fD~v  115 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNG---KG---EL-PAGLGAPFGLI  115 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCS---CS---SC-CTTCCCCEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcch---hh---cc-CCcCCCCEEEE
Confidence            46789999999874 7777777776 77 99999999999888876522 12222211   00   00 01102379999


Q ss_pred             EEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          227 FECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       227 id~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      +....-...+..+.+.|+++ |+++..+.
T Consensus       116 ~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (226)
T 3m33_A          116 VSRRGPTSVILRLPELAAPD-AHFLYVGP  143 (226)
T ss_dssp             EEESCCSGGGGGHHHHEEEE-EEEEEEES
T ss_pred             EeCCCHHHHHHHHHHHcCCC-cEEEEeCC
Confidence            98766666889999999998 99995443

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.40  E-value=0.02  Score=49.58  Aligned_cols=78  Identities=26%  Similarity=0.359  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc-eE--eCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT-DF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++++||+|+ |.+|.+++..+...|+ +|+++++++++.+.+    ++.+.. ..  .|-.+  ...+.+.+++..  .
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISD--PKSVEETISQQEKDF  109 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCC--HHHHHHHHHHHHHHh
Confidence            4688999987 9999999998888899 999999887655433    223432 12  23332  122333333221  1


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      + .+|++|++.|
T Consensus       110 g-~id~li~~Ag  120 (279)
T 3ctm_A          110 G-TIDVFVANAG  120 (279)
T ss_dssp             S-CCSEEEECGG
T ss_pred             C-CCCEEEECCc
Confidence            2 6999999876

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=95.38  E-value=0.057  Score=47.23  Aligned_cols=45  Identities=20%  Similarity=0.274  Sum_probs=37.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF  194 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l  194 (335)
                      .++.+||-+|+|. |..++.+++..+..+|++++.++.-.+.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            4678999999874 78888999987655999999999888877653

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.38  E-value=0.077  Score=48.03  Aligned_cols=45  Identities=20%  Similarity=0.237  Sum_probs=37.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  196 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga  196 (335)
                      .|++|.|+|.|.+|...++.++.+|. +|++.+++. +.+.+.+.|+
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~  219 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGV  219 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTC
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCe
Confidence            37899999999999999999999999 999999875 3444455554

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.37  E-value=0.052  Score=46.97  Aligned_cols=90  Identities=18%  Similarity=0.148  Sum_probs=62.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      .+|||+|+|.+|..++..+...|. +|+++++++++.+.+...+...+. |..+     +    .    -.++|+||++.
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d-----~----~----~~~~d~vi~~a   71 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGEE-----P----S----LDGVTHLLIST   71 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSSC-----C----C----CTTCCEEEECC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEecccc-----c----c----cCCCCEEEECC
Confidence            589999999999999999988899 999999999888877766654332 2221     1    1    23799999988


Q ss_pred             CCh----HHHHHHHHhhcc--C-CeEEEEEcc
Q 019822          231 GVP----SLLSEALETTKV--G-KGKVIVIGV  255 (335)
Q Consensus       231 g~~----~~~~~~~~~l~~--~-~G~~v~~g~  255 (335)
                      +..    .....+++.+..  . -.+++.++.
T Consensus        72 ~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           72 APDSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             CCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             CccccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            642    123444444433  1 157887764

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.37  E-value=0.043  Score=48.69  Aligned_cols=78  Identities=13%  Similarity=0.036  Sum_probs=47.4

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH--HHHHhc----CCceE-eCCCCCCchhHHHHHHhhhC
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK--EKGKAF----GMTDF-INPDDEPNKSISELVKGITH  219 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~--~~~~~l----ga~~v-~~~~~~~~~~~~~~i~~~~~  219 (335)
                      -+++.+|||+|+ |.+|..+++.+...|. +|+++++++++.  +.++.+    +...+ .|-.+  ...+.+.++.   
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~---   84 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD--ACSVQRAVIK---   84 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC--HHHHHHHHHH---
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCC--HHHHHHHHHH---
Confidence            467889999987 9999999999988898 999999876531  223332    11111 23222  1223333332   


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                       .++|+||++.+.
T Consensus        85 -~~~d~Vih~A~~   96 (335)
T 1rpn_A           85 -AQPQEVYNLAAQ   96 (335)
T ss_dssp             -HCCSEEEECCSC
T ss_pred             -cCCCEEEECccc
Confidence             258999998874

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=95.35  E-value=0.12  Score=44.70  Aligned_cols=105  Identities=13%  Similarity=0.230  Sum_probs=65.5

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHHHHh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKG  216 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~  216 (335)
                      ......++++||=+|+|+ |..+..+++.+ +..+|++++.++++.+.+++    +|...  ++..+.   ..+...+..
T Consensus        77 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~---~~~~~~~~~  152 (274)
T 3ajd_A           77 IVLNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADM---RKYKDYLLK  152 (274)
T ss_dssp             HHHCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCH---HHHHHHHHH
T ss_pred             HHhCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCCh---Hhcchhhhh
Confidence            345678899999888764 66677777765 43499999999998877643    45432  232221   112111100


Q ss_pred             hhCCCCccEEE-E--cCCC---------------------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          217 ITHGMGVDYCF-E--CTGV---------------------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       217 ~~~g~g~d~vi-d--~~g~---------------------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                        ....||+|+ |  |++.                     ...++.+++.|+++ |+++....
T Consensus       153 --~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~stc  212 (274)
T 3ajd_A          153 --NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD-GELVYSTC  212 (274)
T ss_dssp             --TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             --ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEEC
Confidence              123799997 5  4431                     34677888899997 99887643

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=95.35  E-value=0.13  Score=45.39  Aligned_cols=88  Identities=17%  Similarity=0.228  Sum_probs=57.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC--hhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN--PWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~--~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+|.|+|.|.+|...++.+...|..+|++.+++  +++.+.+++.|... .       .+..+.++      ..|+||-|
T Consensus        25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~-~-------~~~~e~~~------~aDvVi~~   90 (312)
T 3qsg_A           25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC-K-------ASVAEVAG------ECDVIFSL   90 (312)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE-C-------SCHHHHHH------HCSEEEEC
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE-e-------CCHHHHHh------cCCEEEEe
Confidence            579999999999998888888887689999986  57778777777532 1       11222222      46888888


Q ss_pred             CCChHHHH---HHHHhhccCCeEEEEEc
Q 019822          230 TGVPSLLS---EALETTKVGKGKVIVIG  254 (335)
Q Consensus       230 ~g~~~~~~---~~~~~l~~~~G~~v~~g  254 (335)
                      +......+   .+...+.++ ..++..+
T Consensus        91 vp~~~~~~~~~~l~~~l~~~-~ivvd~s  117 (312)
T 3qsg_A           91 VTAQAALEVAQQAGPHLCEG-ALYADFT  117 (312)
T ss_dssp             SCTTTHHHHHHHHGGGCCTT-CEEEECC
T ss_pred             cCchhHHHHHHhhHhhcCCC-CEEEEcC
Confidence            77653322   233334444 4555444

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.34  E-value=0.07  Score=47.68  Aligned_cols=94  Identities=12%  Similarity=0.065  Sum_probs=58.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh----hhHHHH---HhcCCceE-eCCCCCCchhHHHHHHhhhCCC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP----WKKEKG---KAFGMTDF-INPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~----~~~~~~---~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      ..+|||+|+ |.+|..+++.+...|. +|+++++++    ++.+.+   +..+...+ .|..+  ...+.+.+++    .
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d--~~~l~~~~~~----~   82 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE--QEAMEKILKE----H   82 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC--HHHHHHHHHH----T
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC--HHHHHHHHhh----C
Confidence            357999998 9999999999988898 999999876    454433   33454432 23332  1223333322    2


Q ss_pred             CccEEEEcCCCh--HHHHHHHHhhccCCe---EEEE
Q 019822          222 GVDYCFECTGVP--SLLSEALETTKVGKG---KVIV  252 (335)
Q Consensus       222 g~d~vid~~g~~--~~~~~~~~~l~~~~G---~~v~  252 (335)
                      ++|+||.+.+..  .....+++..... |   +++.
T Consensus        83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~-g~v~~~v~  117 (346)
T 3i6i_A           83 EIDIVVSTVGGESILDQIALVKAMKAV-GTIKRFLP  117 (346)
T ss_dssp             TCCEEEECCCGGGGGGHHHHHHHHHHH-CCCSEEEC
T ss_pred             CCCEEEECCchhhHHHHHHHHHHHHHc-CCceEEee
Confidence            799999998852  1224555555443 3   5653

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.34  E-value=0.062  Score=46.72  Aligned_cols=78  Identities=17%  Similarity=0.251  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHHH-hcCCceE--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPW---KKEKGK-AFGMTDF--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~~---~~~~~~-~lga~~v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+   |++|.++++.+...|+ +|++++++++   ..+.+. +.+....  .|-.+  ..+..+.+++..  
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~   96 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSL--DEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            5688999985   6999999999988999 9999998875   223332 2342222  23332  122333333221  


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                      -+ ++|++|++.|
T Consensus        97 ~g-~iD~lv~~Ag  108 (285)
T 2p91_A           97 WG-SLDIIVHSIA  108 (285)
T ss_dssp             TS-CCCEEEECCC
T ss_pred             cC-CCCEEEECCC
Confidence            13 6999999887

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.34  E-value=0.06  Score=47.26  Aligned_cols=69  Identities=19%  Similarity=0.155  Sum_probs=47.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      .+|||+|+ |.+|..+++.+...|. +|+++++++.+.+ ++  +.. ++..+    -. .+.+.+...  ++|+||++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~-~~~~D----l~-~~~~~~~~~--~~d~Vih~a   70 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYE-YRVSD----YT-LEDLINQLN--DVDAVVHLA   70 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCE-EEECC----CC-HHHHHHHTT--TCSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceE-EEEcc----cc-HHHHHHhhc--CCCEEEEcc
Confidence            68999997 9999999999999999 9999999855544 43  332 22222    22 445555544  799999988


Q ss_pred             CC
Q 019822          231 GV  232 (335)
Q Consensus       231 g~  232 (335)
                      +.
T Consensus        71 ~~   72 (311)
T 3m2p_A           71 AT   72 (311)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=95.32  E-value=0.13  Score=41.23  Aligned_cols=102  Identities=16%  Similarity=0.100  Sum_probs=68.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc----eEeCCCCCCchhHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT----DFINPDDEPNKSISEL  213 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~----~v~~~~~~~~~~~~~~  213 (335)
                      +.+.....++.+||-+|+|. |..+..+++. +. +|++++.+++..+.+++.    +..    .++..+.   .+    
T Consensus        44 l~~~~~~~~~~~vLdiG~G~-G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~---~~----  113 (194)
T 1dus_A           44 LVENVVVDKDDDILDLGCGY-GVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL---YE----  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST---TT----
T ss_pred             HHHHcccCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECch---hc----
Confidence            45666777899999999864 7777777777 77 999999999887776542    322    2222221   11    


Q ss_pred             HHhhhCCCCccEEEEcCCC-------hHHHHHHHHhhccCCeEEEEEccCC
Q 019822          214 VKGITHGMGVDYCFECTGV-------PSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       214 i~~~~~g~g~d~vid~~g~-------~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                         ......+|+|+.....       ...+..+.+.|+++ |+++......
T Consensus       114 ---~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~~  160 (194)
T 1dus_A          114 ---NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVVIQTK  160 (194)
T ss_dssp             ---TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEEEEST
T ss_pred             ---ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCC-CEEEEEECCC
Confidence               1112379999864331       23567778889997 9988876543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=95.31  E-value=0.038  Score=47.13  Aligned_cols=100  Identities=18%  Similarity=0.216  Sum_probs=63.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhC-CCCccEEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH-GMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~-g~g~d~vi  227 (335)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.     ....++-.+  ..+..+.+++... ..++|++|
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d--~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSG--EEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSS--HHHHHHHHHHHHTTTCCEEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence            4678999987 9999999999999999 99999988765321     111222222  1333333333321 12689999


Q ss_pred             EcCCC-------hH-------------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          228 ECTGV-------PS-------------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       228 d~~g~-------~~-------------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      ++.|.       ..                   ..+.+.+.+..+ |+++.++....
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~~  148 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGASAA  148 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGGG
T ss_pred             ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEechhh
Confidence            98873       00                   123344555666 89999976544

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.31  E-value=0.039  Score=47.79  Aligned_cols=82  Identities=24%  Similarity=0.329  Sum_probs=57.7

Q ss_pred             HhcC-CCCCCEEEEEcCC-HHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhC
Q 019822          144 KEAK-VEKGSSVAVLGLG-TVGLGAVDGARMH--GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       144 ~~~~-~~~~~~VlI~G~g-~vG~~ai~la~~~--G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      +..+ --.+++++|+|.| .+|..++.++...  |+ +|+++.+..                      .++.+.++    
T Consensus       150 ~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~a-tVtv~h~~t----------------------~~L~~~~~----  202 (281)
T 2c2x_A          150 RRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENA-TVTLCHTGT----------------------RDLPALTR----  202 (281)
T ss_dssp             HHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCC-EEEEECTTC----------------------SCHHHHHT----
T ss_pred             HHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCC-EEEEEECch----------------------hHHHHHHh----
Confidence            3344 4578999999987 5799999999988  77 888875322                      12333332    


Q ss_pred             CCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          220 GMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       220 g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                        .+|+||.++|.+..+.  .+.++++ ..++++|...
T Consensus       203 --~ADIVI~Avg~p~~I~--~~~vk~G-avVIDVgi~r  235 (281)
T 2c2x_A          203 --QADIVVAAVGVAHLLT--ADMVRPG-AAVIDVGVSR  235 (281)
T ss_dssp             --TCSEEEECSCCTTCBC--GGGSCTT-CEEEECCEEE
T ss_pred             --hCCEEEECCCCCcccC--HHHcCCC-cEEEEccCCC
Confidence              5899999999875322  3446776 8888887653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.31  E-value=0.057  Score=47.22  Aligned_cols=92  Identities=17%  Similarity=0.179  Sum_probs=57.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-------hhHHHHH---hcCCceE-eCCCCCCchhHHHHHHhhh
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-------WKKEKGK---AFGMTDF-INPDDEPNKSISELVKGIT  218 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~-------~~~~~~~---~lga~~v-~~~~~~~~~~~~~~i~~~~  218 (335)
                      ..+|||+|+ |.+|..+++.+...|. +|+++++++       ++.+.++   ..+...+ .|..+   .   +.+.+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~---~~l~~~~   74 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND---H---ETLVKAI   74 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC---H---HHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC---H---HHHHHHH
Confidence            357999997 9999999998888898 899999876       5544333   3454332 23333   2   2344433


Q ss_pred             CCCCccEEEEcCCCh--HHHHHHHHhhccC--CeEEE
Q 019822          219 HGMGVDYCFECTGVP--SLLSEALETTKVG--KGKVI  251 (335)
Q Consensus       219 ~g~g~d~vid~~g~~--~~~~~~~~~l~~~--~G~~v  251 (335)
                      .  ++|+||++.+..  .....+++.+...  -.+++
T Consensus        75 ~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           75 K--QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             T--TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             h--CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            3  599999998742  1233444444432  13666

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.30  E-value=0.061  Score=48.72  Aligned_cols=49  Identities=27%  Similarity=0.268  Sum_probs=41.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCc
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMT  197 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lga~  197 (335)
                      --.+++|+|+|.|.+|..+++.+...|+ +|++.+++.++.+. ++++|+.
T Consensus       170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          170 SLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            3578999999999999999999999999 89999999887764 4556654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=95.30  E-value=0.013  Score=52.34  Aligned_cols=77  Identities=17%  Similarity=0.148  Sum_probs=47.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH----HHHHhc------CCc-eE--eCCCCCCchhHHHHHHh
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK----EKGKAF------GMT-DF--INPDDEPNKSISELVKG  216 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~----~~~~~l------ga~-~v--~~~~~~~~~~~~~~i~~  216 (335)
                      ++++||+|+ |++|.+++..+...|+ +|+.+.++.++.    +.+++.      +.. .+  .|-.+  ..++.+.+++
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~   78 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD--SKSVAAARER   78 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC--HHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCC--HHHHHHHHHH
Confidence            567899987 9999999999999998 776665443321    222222      111 22  23333  2334444444


Q ss_pred             hhCCCCccEEEEcCC
Q 019822          217 ITHGMGVDYCFECTG  231 (335)
Q Consensus       217 ~~~g~g~d~vid~~g  231 (335)
                      ...+ ++|++|++.|
T Consensus        79 ~~~g-~iD~lVnnAG   92 (327)
T 1jtv_A           79 VTEG-RVDVLVCNAG   92 (327)
T ss_dssp             CTTS-CCSEEEECCC
T ss_pred             HhcC-CCCEEEECCC
Confidence            4333 7999999886

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.29  E-value=0.15  Score=45.66  Aligned_cols=133  Identities=11%  Similarity=0.066  Sum_probs=79.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-CCCEEE-EEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          152 SSVAVLGLGTVGLGAVDGARMH-GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~-G~~~V~-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      -+|.|+|+|.+|...+..++.. +. +++ +.++++++.+. ++++|. .++  .     ++.    ++.....+|+|+.
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~-~~~--~-----~~~----~~l~~~~~D~V~i   71 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDL-ELVVIADPFIEGAQRLAEANGA-EAV--A-----SPD----EVFARDDIDGIVI   71 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHTTTC-EEE--S-----SHH----HHTTCSCCCEEEE
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCC-cee--C-----CHH----HHhcCCCCCEEEE
Confidence            3789999999999887777665 66 665 56777777655 466774 333  1     222    3333347999999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEEccCCC-ccc-cchhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCC
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV-PLNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~-~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~  301 (335)
                      |+......+.+..++..+  .-+++..+.. ... ...+.... .+++.+.-...  ......+..+.+++++|.+
T Consensus        72 ~tp~~~h~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~--~r~~p~~~~~k~~i~~g~i  143 (344)
T 3euw_A           72 GSPTSTHVDLITRAVERG--IPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFN--RRFDPSFAAINARVANQEI  143 (344)
T ss_dssp             CSCGGGHHHHHHHHHHTT--CCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCG--GGGCHHHHHHHHHHHTTTT
T ss_pred             eCCchhhHHHHHHHHHcC--CcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecch--hhcCHHHHHHHHHHhcCCC
Confidence            999887778888888774  4455654432 100 01111111 12333332221  1123456778888998875

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.29  E-value=0.19  Score=42.69  Aligned_cols=89  Identities=19%  Similarity=0.240  Sum_probs=58.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhh--------------HHHH-HhcCCceEeCCCCCCchhHHHH
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK--------------KEKG-KAFGMTDFINPDDEPNKSISEL  213 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~--------------~~~~-~~lga~~v~~~~~~~~~~~~~~  213 (335)
                      ....+|.|+|+|.+|.+.+..+...|. +|++.++++++              .+.+ ++++....        .+..+.
T Consensus        17 ~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~e~   87 (245)
T 3dtt_A           17 FQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHL--------AAFADV   87 (245)
T ss_dssp             --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEE--------EEHHHH
T ss_pred             cCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceec--------cCHHHH
Confidence            346789999999999999999998999 99999999887              3332 33443221        223333


Q ss_pred             HHhhhCCCCccEEEEcCCChHHHHHH----HHhhccCCeEEEEEc
Q 019822          214 VKGITHGMGVDYCFECTGVPSLLSEA----LETTKVGKGKVIVIG  254 (335)
Q Consensus       214 i~~~~~g~g~d~vid~~g~~~~~~~~----~~~l~~~~G~~v~~g  254 (335)
                      ++      ..|+||-++......+.+    ...+ ++ ..++.++
T Consensus        88 ~~------~aDvVilavp~~~~~~~~~~i~~~~l-~g-~ivi~~s  124 (245)
T 3dtt_A           88 AA------GAELVVNATEGASSIAALTAAGAENL-AG-KILVDIA  124 (245)
T ss_dssp             HH------HCSEEEECSCGGGHHHHHHHHCHHHH-TT-SEEEECC
T ss_pred             Hh------cCCEEEEccCcHHHHHHHHHhhhhhc-CC-CEEEECC
Confidence            32      479999999876333322    2334 54 5777776

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.27  E-value=0.1  Score=49.27  Aligned_cols=83  Identities=20%  Similarity=0.265  Sum_probs=54.0

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh---H----HHHHhcCCce-E--eCCCCCCchhHHHHHHh
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK---K----EKGKAFGMTD-F--INPDDEPNKSISELVKG  216 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~---~----~~~~~lga~~-v--~~~~~~~~~~~~~~i~~  216 (335)
                      +.++.++||+|+ |.+|..+++.+...|+++|+.+.++...   .    +.+++.|... +  .|-.+  .......+.+
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d--~~~v~~~~~~  300 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD--RESVRELLGG  300 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCC--HHHHHHHHHH
Confidence            567899999987 9999999988888898669999887642   1    2344556432 2  23332  2334444444


Q ss_pred             hhCCCCccEEEEcCCC
Q 019822          217 ITHGMGVDYCFECTGV  232 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~  232 (335)
                      ......+|.||++.|.
T Consensus       301 i~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          301 IGDDVPLSAVFHAAAT  316 (486)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHhcCCCcEEEECCcc
Confidence            3222268999998873

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=95.26  E-value=0.068  Score=43.75  Aligned_cols=74  Identities=15%  Similarity=0.174  Sum_probs=46.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      +++||+|+ |.+|..+++.+...   +|+++++++++.+.+. +++. ..+..+-.+...+.+.+++  .+ ++|++|++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~-~id~vi~~   73 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AG-PLDLLVHA   73 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HC-SEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cC-CCCEEEEC
Confidence            36899987 99999887776544   8999999988776653 3333 3332221111223333333  13 69999998


Q ss_pred             CCC
Q 019822          230 TGV  232 (335)
Q Consensus       230 ~g~  232 (335)
                      .|.
T Consensus        74 ag~   76 (207)
T 2yut_A           74 VGK   76 (207)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            873

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.26  E-value=0.037  Score=48.69  Aligned_cols=96  Identities=14%  Similarity=0.113  Sum_probs=62.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC--------Cc--eEeCCCCCCchhHHHHHHhhh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG--------MT--DFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg--------a~--~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-        ..  .++.      .+..+.+.. .
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~l~~-~  160 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI------ANGAEYVRK-F  160 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHGGG-C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE------CcHHHHHhh-C
Confidence            3568999998764 667777887766559999999998888775421        11  1221      223232322 1


Q ss_pred             CCCCccEEE-EcCCC----------hHHHHHHHHhhccCCeEEEEEc
Q 019822          219 HGMGVDYCF-ECTGV----------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       219 ~g~g~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                       ...+|+|+ |....          ...++.+.+.|+++ |.++...
T Consensus       161 -~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  205 (296)
T 1inl_A          161 -KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET  205 (296)
T ss_dssp             -SSCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             -CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence             23799998 44221          34678899999998 9988863

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.26  E-value=0.039  Score=49.05  Aligned_cols=72  Identities=19%  Similarity=0.170  Sum_probs=47.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      -+|||+|+ |.+|..+++.+...|+ +|+++++++.+.+.+.+.+...+ .|..+   .   +.+.+...  ++|+||++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d---~---~~~~~~~~--~~d~vih~   84 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECRVAEMLD---H---AGLERALR--GLDGVIFS   84 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEEECCTTC---H---HHHHHHTT--TCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEEEecCCC---H---HHHHHHHc--CCCEEEEC
Confidence            37999987 9999999999988998 99999988766544433343322 23322   2   23444433  59999998


Q ss_pred             CCC
Q 019822          230 TGV  232 (335)
Q Consensus       230 ~g~  232 (335)
                      .+.
T Consensus        85 a~~   87 (342)
T 2x4g_A           85 AGY   87 (342)
T ss_dssp             ---
T ss_pred             Ccc
Confidence            873

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.25  E-value=0.072  Score=46.03  Aligned_cols=78  Identities=13%  Similarity=0.226  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHHH-hcCCceE--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPW---KKEKGK-AFGMTDF--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~~---~~~~~~-~lga~~v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+   |++|.++++.+...|+ +|+.++++++   ..+.++ +.+....  .|-.+  .....+.+++..  
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK--EEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC--HHHHHHHHHHHHHH
Confidence            4688999974   6999999999998999 9999998875   333332 2342222  23333  122333333221  


Q ss_pred             CCCCccEEEEcCC
Q 019822          219 HGMGVDYCFECTG  231 (335)
Q Consensus       219 ~g~g~d~vid~~g  231 (335)
                      .+ ++|++|++.|
T Consensus        82 ~g-~id~lv~nAg   93 (275)
T 2pd4_A           82 LG-SLDFIVHSVA   93 (275)
T ss_dssp             TS-CEEEEEECCC
T ss_pred             cC-CCCEEEECCc
Confidence            13 6999999887

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.25  E-value=0.2  Score=45.32  Aligned_cols=134  Identities=13%  Similarity=0.093  Sum_probs=78.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHH--------cCCCEEEEE-cCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARM--------HGAAKIIGI-DKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~--------~G~~~V~~~-~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      =+|.|+|+|.+|..-+...+.        -++ +++++ ++++++.+. ++++|...++       .++.+.+.    ..
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y-------~d~~ell~----~~   93 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERP-RLVHLAEANAGLAEARAGEFGFEKAT-------ADWRALIA----DP   93 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCC-EEEEEECC--TTHHHHHHHHTCSEEE-------SCHHHHHH----CT
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCc-EEEEEECCCHHHHHHHHHHhCCCeec-------CCHHHHhc----CC
Confidence            489999999999764443322        245 56555 556665554 5778876665       22333333    34


Q ss_pred             CccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCcccc--chhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhC
Q 019822          222 GVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVP--LNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKN  298 (335)
Q Consensus       222 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~--~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~  298 (335)
                      .+|+|+-|+......+.+..++..  |.=|++.-+......  ..+.... .+++.+.-...  ......+..+.+++++
T Consensus        94 ~iDaV~IatP~~~H~~~a~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~--~R~~p~~~~~k~~i~~  169 (393)
T 4fb5_A           94 EVDVVSVTTPNQFHAEMAIAALEA--GKHVWCEKPMAPAYADAERMLATAERSGKVAALGYN--YIQNPVMRHIRKLVGD  169 (393)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCG--GGGCHHHHHHHHHHHT
T ss_pred             CCcEEEECCChHHHHHHHHHHHhc--CCeEEEccCCcccHHHHHHhhhhHHhcCCccccccc--cccChHHHHHHHHHHc
Confidence            799999999888788888888887  466777655431000  0111111 23443332221  1223457778889999


Q ss_pred             CCC
Q 019822          299 KEF  301 (335)
Q Consensus       299 ~~~  301 (335)
                      |++
T Consensus       170 G~i  172 (393)
T 4fb5_A          170 GVI  172 (393)
T ss_dssp             TTT
T ss_pred             CCC
Confidence            885

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.24  E-value=0.096  Score=45.64  Aligned_cols=96  Identities=20%  Similarity=0.140  Sum_probs=60.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcC-CCEEEEEcCChhhH--HHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHG-AAKIIGIDKNPWKK--EKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G-~~~V~~~~~~~~~~--~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      ..+|||+|+ |.+|..+++.+...| . +|+++++++++.  +.+...+...+ .|..+   .   +.+.+...  ++|.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d---~---~~l~~~~~--~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQDD---Q---VIMELALN--GAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTTC---H---HHHHHHHT--TCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCCC---H---HHHHHHHh--cCCE
Confidence            468999997 999999998888778 8 999999887654  23344455433 23332   2   23444333  5999


Q ss_pred             EEEcCCChH---------HHHHHHHhhccC-CeEEEEEcc
Q 019822          226 CFECTGVPS---------LLSEALETTKVG-KGKVIVIGV  255 (335)
Q Consensus       226 vid~~g~~~---------~~~~~~~~l~~~-~G~~v~~g~  255 (335)
                      ||.+.+...         ....+++.+... -++++..+.
T Consensus        76 vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           76 TFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             EEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             EEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence            999887321         122344444332 147777654

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=95.24  E-value=0.096  Score=48.94  Aligned_cols=104  Identities=19%  Similarity=0.215  Sum_probs=65.3

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhhh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ......++++||=+|+|+ |..++++|..++ ...|++++.++++.+.++    ++|...+.-..    .+... +....
T Consensus        99 ~~L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~----~Da~~-l~~~~  172 (456)
T 3m4x_A           99 TAAAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTN----HAPAE-LVPHF  172 (456)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEEC----CCHHH-HHHHH
T ss_pred             HHcCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEe----CCHHH-hhhhc
Confidence            335678899999888754 555666676543 248999999999887763    46654322111    11211 22212


Q ss_pred             CCCCccEEE-E--cCCCh-------------------------HHHHHHHHhhccCCeEEEEEcc
Q 019822          219 HGMGVDYCF-E--CTGVP-------------------------SLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       219 ~g~g~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .+ .||.|+ |  |+|..                         ..+..+++.|+++ |+++....
T Consensus       173 ~~-~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC  235 (456)
T 3m4x_A          173 SG-FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK-GQLIYSTC  235 (456)
T ss_dssp             TT-CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE-EEEEEEES
T ss_pred             cc-cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            33 799997 5  44421                         3577888899997 99886543

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.23  E-value=0.045  Score=47.55  Aligned_cols=96  Identities=17%  Similarity=0.062  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc------CC--c--eEeCCCCCCchhHHHHHHhhh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF------GM--T--DFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l------ga--~--~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.      +.  .  .++..+      ..+.+.+. 
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D------~~~~l~~~-  145 (275)
T 1iy9_A           74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDD------GFMHIAKS-  145 (275)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESC------SHHHHHTC-
T ss_pred             CCCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECc------HHHHHhhC-
Confidence            3568999998864 66777788776656999999999888877652      11  1  233222      22333332 


Q ss_pred             CCCCccEEEE-cCC---------ChHHHHHHHHhhccCCeEEEEEc
Q 019822          219 HGMGVDYCFE-CTG---------VPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       219 ~g~g~d~vid-~~g---------~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                       ...+|+|+- ...         ....++.+.+.|+++ |.++...
T Consensus       146 -~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          146 -ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             -CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             -CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence             237999984 322         135788999999998 9988763

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.23  E-value=0.025  Score=49.69  Aligned_cols=86  Identities=15%  Similarity=0.097  Sum_probs=57.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+..   ..     +..    +..  + .|+||-|+.
T Consensus        16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~~-----~~~----~~~--~-aDvvi~~vp   79 (296)
T 3qha_A           16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAGATL---AD-----SVA----DVA--A-ADLIHITVL   79 (296)
T ss_dssp             CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTTCEE---CS-----SHH----HHT--T-SSEEEECCS
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCEE---cC-----CHH----HHH--h-CCEEEEECC
Confidence            579999999999999998888898 9999999999988887777532   11     111    111  1 678888777


Q ss_pred             ChHHHHH----HHHhhccCCeEEEEEc
Q 019822          232 VPSLLSE----ALETTKVGKGKVIVIG  254 (335)
Q Consensus       232 ~~~~~~~----~~~~l~~~~G~~v~~g  254 (335)
                      .+..+..    +...+.++ ..++..+
T Consensus        80 ~~~~~~~v~~~l~~~l~~g-~ivv~~s  105 (296)
T 3qha_A           80 DDAQVREVVGELAGHAKPG-TVIAIHS  105 (296)
T ss_dssp             SHHHHHHHHHHHHTTCCTT-CEEEECS
T ss_pred             ChHHHHHHHHHHHHhcCCC-CEEEEeC
Confidence            5433333    33334443 4455444

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.23  E-value=0.04  Score=49.77  Aligned_cols=74  Identities=18%  Similarity=0.153  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHh-cCCceE-eCCC-CCCchhHHHHHHhhhCCCCcc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKA-FGMTDF-INPD-DEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~-lga~~v-~~~~-~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      ...+|||+|+ |.+|..+++.+... |. +|+++++++++.+.+.+ .+...+ .|.. +   .+   .+.+...  ++|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d---~~---~~~~~~~--~~d   93 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDITIN---KE---WVEYHVK--KCD   93 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTTTC---HH---HHHHHHH--HCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccCCC---HH---HHHHHhc--cCC
Confidence            3578999987 99999999988877 88 99999998876554433 222222 2222 2   22   2333222  699


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      +||++.+.
T Consensus        94 ~Vih~A~~  101 (372)
T 3slg_A           94 VILPLVAI  101 (372)
T ss_dssp             EEEECBCC
T ss_pred             EEEEcCcc
Confidence            99997763

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.22  E-value=0.077  Score=47.49  Aligned_cols=88  Identities=19%  Similarity=0.154  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+++|.|+|.|.+|...++.++.+|+ +|++.+++.++.  +++. +..    .    .++.+.++      ..|+|+.+
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~~----~----~~l~ell~------~aDvV~l~  206 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GYY----V----DSLDDLYK------QADVISLH  206 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TCB----C----SCHHHHHH------HCSEEEEC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Cee----c----CCHHHHHh------hCCEEEEc
Confidence            46899999999999999999999999 999999877654  2332 221    1    11222222      47889887


Q ss_pred             CCChH----HH-HHHHHhhccCCeEEEEEccC
Q 019822          230 TGVPS----LL-SEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       230 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +...+    .+ ...++.++++ +.++.++..
T Consensus       207 ~p~~~~t~~li~~~~l~~mk~g-a~lIn~arg  237 (333)
T 1j4a_A          207 VPDVPANVHMINDESIAKMKQD-VVIVNVSRG  237 (333)
T ss_dssp             SCCCGGGTTCBSHHHHHHSCTT-EEEEECSCG
T ss_pred             CCCcHHHHHHHhHHHHhhCCCC-cEEEECCCC
Confidence            76432    12 3466778886 777777654

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.22  E-value=0.042  Score=45.16  Aligned_cols=97  Identities=18%  Similarity=0.171  Sum_probs=64.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC----ceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM----TDFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga----~~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      +.++.+||-+|+|. |..+..+++. |..+|++++.++...+.+++...    -.++..+.   .++     .+.. ..+
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~---~~~-----~~~~-~~f  108 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDV---RKL-----DFPS-ASF  108 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCT---TSC-----CSCS-SCE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcch---hcC-----CCCC-Ccc
Confidence            47888999999875 7777777776 44489999999998888865421    12221211   110     1122 379


Q ss_pred             cEEEEcCC---------------------ChHHHHHHHHhhccCCeEEEEEccC
Q 019822          224 DYCFECTG---------------------VPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       224 d~vid~~g---------------------~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      |+|+....                     ....+..+.+.|+++ |+++.....
T Consensus       109 D~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~~  161 (215)
T 2pxx_A          109 DVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTSA  161 (215)
T ss_dssp             EEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred             cEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeCC
Confidence            99996321                     134677888999997 999887654

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.20  E-value=0.091  Score=45.09  Aligned_cols=102  Identities=21%  Similarity=0.262  Sum_probs=69.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i  214 (335)
                      +.+...+.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|..   .++..+.   .++    
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADA---MDL----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT---TSC----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc---ccC----
Confidence            45667788999999999875 7888888888888 99999999988777644    2321   2222211   000    


Q ss_pred             HhhhCCCCccEEEEcCC------ChHHHHHHHHhhccCCeEEEEEcc
Q 019822          215 KGITHGMGVDYCFECTG------VPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                       .+ ....+|+|+....      ....+..+.+.|+++ |+++....
T Consensus       124 -~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  167 (273)
T 3bus_A          124 -PF-EDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIADF  167 (273)
T ss_dssp             -CS-CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred             -CC-CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence             01 1237999985321      234678888999997 99887653

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=95.19  E-value=0.12  Score=44.18  Aligned_cols=44  Identities=23%  Similarity=0.346  Sum_probs=36.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHh-cCCc
Q 019822          153 SVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKA-FGMT  197 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~-lga~  197 (335)
                      +|.|+|+|.+|...+..+...| . +|+++++++++.+.+.+ +|..
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~~-~v~~~~r~~~~~~~~~~~~g~~   47 (263)
T 1yqg_A            2 NVYFLGGGNMAAAVAGGLVKQGGY-RIYIANRGAEKRERLEKELGVE   47 (263)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHHHHHTCCE
T ss_pred             EEEEECchHHHHHHHHHHHHCCCC-eEEEECCCHHHHHHHHHhcCCE
Confidence            5889999999999888887788 7 99999999988887754 5754

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=95.19  E-value=0.034  Score=49.41  Aligned_cols=76  Identities=13%  Similarity=0.105  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCCceEe--CCCCCCchhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KGKAFGMTDFI--NPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~-~~~~lga~~v~--~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      .+.+|||+|+ |.+|..+++.+...|+ +|++++++..... .++++..-.++  |-.+  ...+.+.+++.    ++|+
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d--~~~~~~~~~~~----~~D~   91 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNFATGKREVLPPVAGLSVIEGSVTD--AGLLERAFDSF----KPTH   91 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECCSSSCGGGSCSCTTEEEEECCTTC--HHHHHHHHHHH----CCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCccchhhhhccCCceEEEeeCCC--HHHHHHHHhhc----CCCE
Confidence            4578999987 9999999999988898 9999998654321 11222211122  3322  12233333332    6999


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      ||++.+.
T Consensus        92 vih~A~~   98 (330)
T 2pzm_A           92 VVHSAAA   98 (330)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9998873

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=95.19  E-value=0.015  Score=49.61  Aligned_cols=75  Identities=17%  Similarity=0.221  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhh--CCCCccEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT--HGMGVDYC  226 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~--~g~g~d~v  226 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|+++++++++.+.+.  +  ...|-.+  .....+.+++..  .+ ++|++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~--~~~~~~~~~~~~~~~g-~id~l   85 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD--SDAVDRAFTAVEEHQG-PVEVL   85 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC--HHHHHHHHHHHHHHHS-SCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC--HHHHHHHHHHHHHHcC-CCCEE
Confidence            4678999987 9999999999999999 9999998766543221  1  2234333  122323232221  12 68999


Q ss_pred             EEcCCC
Q 019822          227 FECTGV  232 (335)
Q Consensus       227 id~~g~  232 (335)
                      |++.|.
T Consensus        86 v~~Ag~   91 (247)
T 1uzm_A           86 VSNAGL   91 (247)
T ss_dssp             EEECSC
T ss_pred             EECCCC
Confidence            998874

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.17  E-value=0.043  Score=47.87  Aligned_cols=97  Identities=12%  Similarity=0.120  Sum_probs=64.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CC-------c--eEeCCCCCCchhHHHHHHhh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GM-------T--DFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga-------~--~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ..++++||++|+|. |..+..+++..+..+|++++.+++-.+.+++. ..       .  .++.      .+..+.+...
T Consensus        76 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~------~D~~~~l~~~  148 (283)
T 2i7c_A           76 SKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI------EDASKFLENV  148 (283)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE------SCHHHHHHHC
T ss_pred             CCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE------CChHHHHHhC
Confidence            44678999998764 66777777765545999999999988888653 21       1  1221      2333334332


Q ss_pred             hCCCCccEEE-EcCCC---------hHHHHHHHHhhccCCeEEEEEc
Q 019822          218 THGMGVDYCF-ECTGV---------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       218 ~~g~g~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                        ...+|+|+ |....         ...++.+.+.|+++ |.++...
T Consensus       149 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~  192 (283)
T 2i7c_A          149 --TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  192 (283)
T ss_dssp             --CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             --CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEC
Confidence              33799998 43210         34678889999998 9998774

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.16  E-value=0.091  Score=46.13  Aligned_cols=92  Identities=21%  Similarity=0.147  Sum_probs=59.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeC-------CCCCCchhHHHHHHhhhC-CCCcc
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN-------PDDEPNKSISELVKGITH-GMGVD  224 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~-------~~~~~~~~~~~~i~~~~~-g~g~d  224 (335)
                      +|.|+|+|.+|.+.+..+...|. +|+++++++++.+.+++.|......       .+.   .+.    .+... -+++|
T Consensus         5 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~d   76 (316)
T 2ew2_A            5 KIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPI---FSP----EEIDHQNEQVD   76 (316)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCE---ECG----GGCCTTSCCCS
T ss_pred             eEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCCCeeEeccee---ecc----hhhcccCCCCC
Confidence            79999999999999988888898 9999999999888887666321110       000   000    01111 02689


Q ss_pred             EEEEcCCChHHHHHHHHhh----ccCCeEEEEEc
Q 019822          225 YCFECTGVPSLLSEALETT----KVGKGKVIVIG  254 (335)
Q Consensus       225 ~vid~~g~~~~~~~~~~~l----~~~~G~~v~~g  254 (335)
                      +||-|+... ....+++.+    .++ ..++.+.
T Consensus        77 ~vi~~v~~~-~~~~v~~~l~~~l~~~-~~iv~~~  108 (316)
T 2ew2_A           77 LIIALTKAQ-QLDAMFKAIQPMITEK-TYVLCLL  108 (316)
T ss_dssp             EEEECSCHH-HHHHHHHHHGGGCCTT-CEEEECC
T ss_pred             EEEEEeccc-cHHHHHHHHHHhcCCC-CEEEEec
Confidence            999999865 345544433    344 4566654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.15  E-value=0.046  Score=46.71  Aligned_cols=79  Identities=16%  Similarity=0.251  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHH----hcCCce-E--eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KGK----AFGMTD-F--INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~-~~~----~lga~~-v--~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .++++||+|+ |.+|.++++.+...|+ +|++++++.++.+ .++    +.+... .  .|-.+  ...+.+.+++..  
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDAD   89 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC--HHHHHHHHHHHHHh
Confidence            4578999987 9999999999988999 9999998654432 222    224221 1  23333  122333333321  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .+ ++|++|++.|.
T Consensus        90 ~~-~id~li~~Ag~  102 (265)
T 1h5q_A           90 LG-PISGLIANAGV  102 (265)
T ss_dssp             SC-SEEEEEECCCC
T ss_pred             cC-CCCEEEECCCc
Confidence            12 69999998873

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=95.15  E-value=0.074  Score=43.75  Aligned_cols=95  Identities=16%  Similarity=0.114  Sum_probs=64.0

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCceEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga~~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      ..+.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++. +...+. .+      +    .++.....+|
T Consensus        39 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~d------~----~~~~~~~~fD  104 (211)
T 3e23_A           39 GELPAGAKILELGCGA-GYQAEAMLAA-GF-DVDATDGSPELAAEASRRLGRPVRT-ML------F----HQLDAIDAYD  104 (211)
T ss_dssp             TTSCTTCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHTSCCEE-CC------G----GGCCCCSCEE
T ss_pred             HhcCCCCcEEEECCCC-CHHHHHHHHc-CC-eEEEECCCHHHHHHHHHhcCCceEE-ee------e----ccCCCCCcEE
Confidence            3466788999999864 6677777765 77 999999999988888654 433221 11      1    1111233799


Q ss_pred             EEEEcCCC--------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          225 YCFECTGV--------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       225 ~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      +|+....-        ...+..+.+.|+++ |+++..-.
T Consensus       105 ~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  142 (211)
T 3e23_A          105 AVWAHACLLHVPRDELADVLKLIWRALKPG-GLFYASYK  142 (211)
T ss_dssp             EEEECSCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEEecCchhhcCHHHHHHHHHHHHHhcCCC-cEEEEEEc
Confidence            99964321        23678888999997 98887643

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=95.13  E-value=0.1  Score=45.11  Aligned_cols=97  Identities=20%  Similarity=0.226  Sum_probs=66.0

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC--CceEeCCCCCCchhHHHHHHhhhCC
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG--MTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg--a~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      .......++.+||-+|+|. |..+..+++ .+. +|++++.+++..+.+++..  ...+. .+.   ..       +...
T Consensus        50 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~-~d~---~~-------~~~~  115 (279)
T 3ccf_A           50 LQLLNPQPGEFILDLGCGT-GQLTEKIAQ-SGA-EVLGTDNAATMIEKARQNYPHLHFDV-ADA---RN-------FRVD  115 (279)
T ss_dssp             HHHHCCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHCTTSCEEE-CCT---TT-------CCCS
T ss_pred             HHHhCCCCCCEEEEecCCC-CHHHHHHHh-CCC-eEEEEECCHHHHHHHHhhCCCCEEEE-CCh---hh-------CCcC
Confidence            3555677889999999864 777777777 677 9999999999888886542  22221 111   11       1112


Q ss_pred             CCccEEEEcCCC------hHHHHHHHHhhccCCeEEEEEc
Q 019822          221 MGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       221 ~g~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ..+|+|+....-      ...+..+.+.|+++ |+++...
T Consensus       116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~~  154 (279)
T 3ccf_A          116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSG-GRFVAEF  154 (279)
T ss_dssp             SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            379999864321      24678899999997 9988754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=95.12  E-value=0.054  Score=48.54  Aligned_cols=75  Identities=19%  Similarity=0.130  Sum_probs=48.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CCceE-eCCCCCCchhHHHHHHhhhCCCCc
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GMTDF-INPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----ga~~v-~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      +.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +.+    +...+ .|-.+  ...+.+.++..    ++
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~----~~   81 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD--QNKLLESIREF----QP   81 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC--HHHHHHHHHHH----CC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccC--HHHHHHHHHhc----CC
Confidence            578999987 9999999999988999 999999876543322 211    12211 23222  12222333222    58


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |+||++.+.
T Consensus        82 d~vih~A~~   90 (357)
T 1rkx_A           82 EIVFHMAAQ   90 (357)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEECCCC
Confidence            999999873

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.12  E-value=0.1  Score=46.84  Aligned_cols=89  Identities=20%  Similarity=0.317  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+++|.|+|.|.+|...++.++.+|. +|++.+++..+.+...  |+..+   .     ++.+.++      ..|+|+-+
T Consensus       172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--g~~~~---~-----~l~ell~------~sDvV~l~  234 (345)
T 4g2n_A          172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE--GAIYH---D-----TLDSLLG------ASDIFLIA  234 (345)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT--TCEEC---S-----SHHHHHH------TCSEEEEC
T ss_pred             CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc--CCeEe---C-----CHHHHHh------hCCEEEEe
Confidence            46899999999999999999999999 9999998765443322  43221   1     1222222      46787776


Q ss_pred             CCCh-H---HH-HHHHHhhccCCeEEEEEccC
Q 019822          230 TGVP-S---LL-SEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       230 ~g~~-~---~~-~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +... .   .+ ...++.++++ ..+|-++..
T Consensus       235 ~Plt~~T~~li~~~~l~~mk~g-ailIN~aRG  265 (345)
T 4g2n_A          235 APGRPELKGFLDHDRIAKIPEG-AVVINISRG  265 (345)
T ss_dssp             SCCCGGGTTCBCHHHHHHSCTT-EEEEECSCG
T ss_pred             cCCCHHHHHHhCHHHHhhCCCC-cEEEECCCC
Confidence            6531 1   12 3556677775 666666543

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.11  E-value=0.054  Score=45.51  Aligned_cols=100  Identities=16%  Similarity=0.194  Sum_probs=67.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc---eEeCCCCCCchhHHHHHHhh-
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT---DFINPDDEPNKSISELVKGI-  217 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~---~v~~~~~~~~~~~~~~i~~~-  217 (335)
                      +.......++.+||-+|+|. |..+..+++. |..+|++++.+++..+.+++....   .++..+.          .++ 
T Consensus        35 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~----------~~~~  102 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERADL----------DKLH  102 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCG----------GGCC
T ss_pred             HHHhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcCh----------hhcc
Confidence            44556667889999999864 6677777765 555999999999998888765422   1221111          111 


Q ss_pred             hCCCCccEEEEcCCC------hHHHHHHHHhhccCCeEEEEEc
Q 019822          218 THGMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       218 ~~g~g~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      .....+|+|+....-      ...+..+.+.|+++ |+++...
T Consensus       103 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  144 (243)
T 3bkw_A          103 LPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPG-GHFVFST  144 (243)
T ss_dssp             CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCCceEEEEeccccccchHHHHHHHHHHhcCcC-cEEEEEe
Confidence            122379999864331      34678888999997 9988754

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=95.11  E-value=0.078  Score=46.25  Aligned_cols=74  Identities=12%  Similarity=0.105  Sum_probs=51.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      .+|.|+|+|.+|...+..+...|. +|++++ ++++.+.+.+.|...   .     .+..+.++      ..|+||-|++
T Consensus         4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-~~~~~~~~~~~g~~~---~-----~~~~~~~~------~~D~vi~~vp   67 (295)
T 1yb4_A            4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT-IGPVADELLSLGAVN---V-----ETARQVTE------FADIIFIMVP   67 (295)
T ss_dssp             CEEEECCCSTTHHHHHHHHHHTTC-EEEECC-SSCCCHHHHTTTCBC---C-----SSHHHHHH------TCSEEEECCS
T ss_pred             CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc-CHHHHHHHHHcCCcc---c-----CCHHHHHh------cCCEEEEECC
Confidence            378999999999998888888898 999998 888777776655321   1     12222222      4788888887


Q ss_pred             ChHHHHHHHH
Q 019822          232 VPSLLSEALE  241 (335)
Q Consensus       232 ~~~~~~~~~~  241 (335)
                      .+..+...+.
T Consensus        68 ~~~~~~~v~~   77 (295)
T 1yb4_A           68 DTPQVEDVLF   77 (295)
T ss_dssp             SHHHHHHHHH
T ss_pred             CHHHHHHHHh
Confidence            6644555553

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.11  E-value=0.16  Score=45.14  Aligned_cols=135  Identities=15%  Similarity=0.055  Sum_probs=79.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-CCCEEE-EEcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          152 SSVAVLGLGTVGLGAVDGARMH-GAAKII-GIDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~-G~~~V~-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      -+|.|+|+|.+|...+..++.. +. +++ +.++++++.+. ++++|...++       .++.+.+.    ...+|+|+.
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~-------~~~~~ll~----~~~~D~V~i   73 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQA-EVRGIASRRLENAQKMAKELAIPVAY-------GSYEELCK----DETIDIIYI   73 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSE-EEEEEBCSSSHHHHHHHHHTTCCCCB-------SSHHHHHH----CTTCSEEEE
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHcCCCcee-------CCHHHHhc----CCCCCEEEE
Confidence            3788999999998877777764 56 666 45666666554 4667764332       22333332    237999999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEEccCCC-ccc-cchhHHHh-hcCcEEEEeeccCCCCcCcHHHHHHHHhCCCCC
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMV-PLNVIALA-CGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK  302 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~-~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~  302 (335)
                      |+......+.+..++..+  .-+++..+.. ... ...+.... .+++.+.-...  ......+..+.+++++|.+-
T Consensus        74 ~tp~~~h~~~~~~al~~g--k~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~--~r~~p~~~~~k~~i~~g~iG  146 (330)
T 3e9m_A           74 PTYNQGHYSAAKLALSQG--KPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQK--SVFLPITQKVKATIQEGGLG  146 (330)
T ss_dssp             CCCGGGHHHHHHHHHHTT--CCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCS--GGGCHHHHHHHHHHHTTTTC
T ss_pred             cCCCHHHHHHHHHHHHCC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEh--hhhCHHHHHHHHHHhCCCCC
Confidence            999887778888888774  4455654432 100 01111111 23444432221  11234567788889988853

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.10  E-value=0.055  Score=46.24  Aligned_cols=99  Identities=15%  Similarity=0.124  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHHHHhhhCCCC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      .++.+||=+|+|+ |..++.+++.....+|++++.+++..+.+++    +|...  ++..+      ..+..........
T Consensus        79 ~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d------~~~~~~~~~~~~~  151 (249)
T 3g89_A           79 QGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGR------AEVLAREAGHREA  151 (249)
T ss_dssp             CSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECC------HHHHTTSTTTTTC
T ss_pred             CCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECc------HHHhhcccccCCC
Confidence            5678999998763 6677777777643499999999998877643    45432  23222      2111110001237


Q ss_pred             ccEEEE-cCCC-hHHHHHHHHhhccCCeEEEEEcc
Q 019822          223 VDYCFE-CTGV-PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       223 ~d~vid-~~g~-~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ||+|+. ++.. ...++.+.+.|+++ |+++.+-.
T Consensus       152 fD~I~s~a~~~~~~ll~~~~~~Lkpg-G~l~~~~g  185 (249)
T 3g89_A          152 YARAVARAVAPLCVLSELLLPFLEVG-GAAVAMKG  185 (249)
T ss_dssp             EEEEEEESSCCHHHHHHHHGGGEEEE-EEEEEEEC
T ss_pred             ceEEEECCcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence            999985 3332 34567788899997 99987753

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.09  E-value=0.1  Score=45.68  Aligned_cols=92  Identities=16%  Similarity=0.090  Sum_probs=57.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC-----hhhHHHHH---hcCCceE-eCCCCCCchhHHHHHHhhhCC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN-----PWKKEKGK---AFGMTDF-INPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~-----~~~~~~~~---~lga~~v-~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      ..+|||+|+ |.+|..+++.+...|. +|++++++     +++.+.++   ..+...+ .|..+   .   +.+.+... 
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d---~---~~l~~~~~-   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD---H---QRLVDALK-   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSC---H---HHHHHHHT-
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCC---H---HHHHHHHh-
Confidence            357999997 9999999999988898 99999987     34444433   2344322 23332   2   23444433 


Q ss_pred             CCccEEEEcCCCh------HHHHHHHHhhccC--CeEEE
Q 019822          221 MGVDYCFECTGVP------SLLSEALETTKVG--KGKVI  251 (335)
Q Consensus       221 ~g~d~vid~~g~~------~~~~~~~~~l~~~--~G~~v  251 (335)
                       ++|+||++.+..      .....+++.....  -.+++
T Consensus        76 -~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           76 -QVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             -TCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             -CCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence             599999988742      1234455555443  13676

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.04  E-value=0.096  Score=49.95  Aligned_cols=83  Identities=13%  Similarity=0.141  Sum_probs=52.5

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCCh-------------hh----HHHHHhcCCce-E--eCCCCC
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNP-------------WK----KEKGKAFGMTD-F--INPDDE  205 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~-------------~~----~~~~~~lga~~-v--~~~~~~  205 (335)
                      ++++.++||+|+ |++|..+++.+...|++.|+.+ .++.             ++    .+.+++.|... +  .|-.+ 
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd-  326 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD-  326 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS-
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC-
Confidence            567889999986 9999999998888899557777 7763             11    23344556432 2  23332 


Q ss_pred             CchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          206 PNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       206 ~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                       .......+.+......+|.||++.|.
T Consensus       327 -~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 -AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             -HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             -HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence             23344444443322368999998874

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.03  E-value=0.03  Score=48.16  Aligned_cols=75  Identities=15%  Similarity=0.226  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHH---hhhCCCCcc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVK---GITHGMGVD  224 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~---~~~~g~g~d  224 (335)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+..   .... ..|-.+  +.+..+.++   +.. + ++|
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~~~~~~Dv~d--~~~v~~~~~~~~~~~-g-~iD   98 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DIHTVAGDISK--PETADRIVREGIERF-G-RID   98 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TEEEEESCTTS--HHHHHHHHHHHHHHH-S-CCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ceEEEEccCCC--HHHHHHHHHHHHHHC-C-CCC
Confidence            5688999987 9999999999999999 999999876543211   1111 123332  122322232   222 2 699


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      ++|++.|.
T Consensus        99 ~lv~nAg~  106 (260)
T 3un1_A           99 SLVNNAGV  106 (260)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	335
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	4e-34
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	7e-34
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	3e-31
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-30
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-29
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	2e-26
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-24
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	7e-21
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	3e-19
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	4e-18
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	3e-16
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	6e-16
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-15
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	3e-15
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	7e-15
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	2e-14
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	1e-13
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	2e-13
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	8e-11
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-10
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	9e-09
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	1e-08
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	3e-08
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	4e-08
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	7e-08
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	2e-07
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	3e-07
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	3e-07
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	3e-05

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  121 bits (304), Expect = 4e-34
 Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 5/177 (2%)

Query: 125 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN 184
           P ++  + CGF TGYGAA   AKV  GS+ AV GLG VG  A+ G +  GA++IIG+  +
Sbjct: 2   PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTH 61

Query: 185 PWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTK 244
             K  K    G T+ +NP D  +K I E++   T+G GVDY  EC G    +  AL++T 
Sbjct: 62  KDKFPKAIELGATECLNPKDY-DKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTY 119

Query: 245 VGKGKVIVIGVGV-DAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 300
            G G  +V+G+   +  +PL+ + L   GR+LKG+ FGG K + ++  L+D    K+
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLL-TGRSLKGSVFGGFKGE-EVSRLVDDYMKKK 174

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  120 bits (302), Expect = 7e-34
 Identities = 68/178 (38%), Positives = 92/178 (51%), Gaps = 2/178 (1%)

Query: 122 SIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGI 181
           +  P     + CGF+TGYGAA K  KV+ GS+  V GLG VGL  + G +  GA++IIGI
Sbjct: 1   AAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGI 60

Query: 182 DKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241
           D N  K EK  A G T+ I+P D         V     G  V Y FE  G    + +AL 
Sbjct: 61  DLNKDKFEKAMAVGATECISPKDSTK--PISEVLSEMTGNNVGYTFEVIGHLETMIDALA 118

Query: 242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 299
           +  +  G  +V+GV   A +      L   GRT KG  FGG+K++ D+P L+ +   K
Sbjct: 119 SCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  113 bits (284), Expect = 3e-31
 Identities = 69/177 (38%), Positives = 93/177 (52%), Gaps = 4/177 (2%)

Query: 124 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK 183
           +      + CGF++GYGAA   AKV  GS+ AV GLG VGL A+ G ++ GA++II ID 
Sbjct: 2   NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 61

Query: 184 NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243
           N  K  K KA G TD +NP +                 GVDY  +C G    L  A++ T
Sbjct: 62  NGEKFPKAKALGATDCLNPRELDKPVQDV--ITELTAGGVDYSLDCAGTAQTLKAAVDCT 119

Query: 244 KVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 300
            +G G   V+G  VD M    V  +   GR++ GT FGG K+   +P L+   KNK+
Sbjct: 120 VLGWGSCTVVGAKVDEMTIPTVDVIL--GRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  111 bits (277), Expect = 3e-30
 Identities = 69/173 (39%), Positives = 96/173 (55%), Gaps = 2/173 (1%)

Query: 128 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK 187
              + CGF+TGYG+A K AKV +GS+ AV GLG VGL  + G +  GAA+IIG+D N  K
Sbjct: 6   VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 65

Query: 188 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK 247
             K K  G T+ +NP D   K I E++  +++G GVD+ FE  G    +  AL   +   
Sbjct: 66  FAKAKEVGATECVNPQDYK-KPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAY 123

Query: 248 GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 300
           G  +++GV  D+        L   GRT KG  FGG K+K  +P L+     K+
Sbjct: 124 GVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  108 bits (270), Expect = 3e-29
 Identities = 69/173 (39%), Positives = 91/173 (52%), Gaps = 2/173 (1%)

Query: 128 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK 187
              L CG +TGYGAA   AK+E GS  AV GLG VGL  + G ++ GA++IIG+D N  K
Sbjct: 6   VCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 65

Query: 188 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK 247
             + K FG T+ INP D        L++      GVDY FEC G   ++  ALE    G 
Sbjct: 66  FARAKEFGATECINPQDFSKPIQEVLIE--MTDGGVDYSFECIGNVKVMRAALEACHKGW 123

Query: 248 GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 300
           G  +V+GV                GRT KGT FGG K+   +P L+ +  +K+
Sbjct: 124 GVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  100 bits (250), Expect = 2e-26
 Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 6/173 (3%)

Query: 123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID 182
           +       L CG  TG GA     KV   SS    G G VGL A+  A++ GA+ II +D
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 60

Query: 183 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242
               + E  K  G T  IN   +        +K IT G GV++  E TG P +L + ++ 
Sbjct: 61  IVESRLELAKQLGATHVINSKTQ---DPVAAIKEITDG-GVNFALESTGSPEILKQGVDA 116

Query: 243 TKVGKGKVIVIGVG-VDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLD 294
             +  GK+ V+G   +      +V  L  GG+T+ G   G    K  +P L+ 
Sbjct: 117 LGI-LGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVR 168

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 72/173 (41%), Positives = 93/173 (53%), Gaps = 3/173 (1%)

Query: 128 ASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK 187
              L CG +TG+GAA   AKVE GS+ AV GLG VGL AV G    GA +II +D NP K
Sbjct: 6   VCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDK 65

Query: 188 KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGK 247
            EK K FG TDF+NP+D        L K    G+  D+  EC G   ++  ALE+   G 
Sbjct: 66  FEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGV--DFSLECVGNVGVMRNALESCLKGW 123

Query: 248 GKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE 300
           G  +++G      V    I L   GRT KG+ FGG K K  +P ++    +K+
Sbjct: 124 GVSVLVGWTDLHDVATRPIQLI-AGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 86.1 bits (212), Expect = 7e-21
 Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 8/170 (4%)

Query: 127 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 186
           +A  ++   TTG+  A + A +E GSSV V+G+G VGL  + GA++ GA +IIG+   P 
Sbjct: 5   NAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPI 63

Query: 187 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 246
             E  K +G TD +N  +   +   + V  +T+G GVD      G    LS+A++  K G
Sbjct: 64  CVEAAKFYGATDILNYKNGHIE---DQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG 120

Query: 247 KGKVIVIGV-GVDAMVPLNVIALACG--GRTLKGTTFGGIKTKSDLPTLL 293
            G +  I   G    + +  +   CG   +T+KG    G + +++    +
Sbjct: 121 -GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDM 169

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 82.3 bits (202), Expect = 3e-19
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 1/129 (0%)

Query: 30  GKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-PIALNGLMLDSTSR 88
             +VES G  V E + G+ VIP +I +C EC  C S  TN C+K        +M    +R
Sbjct: 71  AGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETR 130

Query: 89  MSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
            + +G+K+      ST+S+Y V++   V K+DPS+   +         +   A       
Sbjct: 131 FTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHG 190

Query: 149 EKGSSVAVL 157
           +   +V  L
Sbjct: 191 KCIRTVLSL 199

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 79.1 bits (194), Expect = 4e-18
 Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 29/193 (15%)

Query: 127 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 186
           D + LS    TGY  A   A V  GS+V V G G VGL A   AR+ GAA +I  D NP 
Sbjct: 3   DLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPA 61

Query: 187 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV-------------- 232
           +    KA G        D P   + E +  +     VD   +  G               
Sbjct: 62  RLAHAKAQGFEIADLSLDTP---LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEA 118

Query: 233 -PSLLSEALETTKVGKGKVIVIGV-------GVDAMVPLNVIALACGGRTLKGTTFGGIK 284
             ++L+  ++ T+V  GK+ + G+        VDA   +  +++  G    K  +F   +
Sbjct: 119 PATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQ 177

Query: 285 T--KSDLPTLLDK 295
           T        L+  
Sbjct: 178 TPVMKYNRALMQA 190

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 74.2 bits (181), Expect = 3e-16
 Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 8/132 (6%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLK-----YPIALNGLMLDST 86
           +VES G  V   K GD VIP +  +CK C+ C S +TNLC K     YP     LM D T
Sbjct: 72  IVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRT 131

Query: 87  SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 146
           SR + +G+ +YH    S++S+Y V+    + +VD   D       +  F +   A     
Sbjct: 132 SRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAI---D 188

Query: 147 KVEKGSSVAVLG 158
            +++G S+  + 
Sbjct: 189 LMKEGKSIRTIL 200

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 72.7 bits (177), Expect = 6e-16
 Identities = 45/174 (25%), Positives = 66/174 (37%), Gaps = 3/174 (1%)

Query: 124 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK 183
           D    +   C   T Y A  +  +   G +V + G G +GL  V  AR  GA  +I I  
Sbjct: 2   DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAG 61

Query: 184 NPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETT 243
           +P + +  +  G    +N  +   +   + +  ITHG G D+  E TG    L E  E  
Sbjct: 62  SPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELL 121

Query: 244 KVGKGKVIVIGVGV-DAMVPLNVIALACG-GRTLKGTTFGGIKTKSDLPTLLDK 295
           + G G   V GV V    VP  V         T KG             ++  +
Sbjct: 122 RRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSR 174

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 1e-15
 Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 1/131 (0%)

Query: 28  VSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALN-GLMLDST 86
           +   +VES G+ V ++K GD VIP YI +C EC+ C +  TNLC K  +    GLM D T
Sbjct: 67  LGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGT 126

Query: 87  SRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEA 146
           SR + +G+ + H    ST+SEY V+    V K+DP I   +    +  F     A     
Sbjct: 127 SRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMH 186

Query: 147 KVEKGSSVAVL 157
             +   +V  +
Sbjct: 187 SGKSIRTVVKI 197

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 71.1 bits (173), Expect = 3e-15
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 11/133 (8%)

Query: 33  VESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML-DSTSRMSV 91
           VES G  V  VK GD VIP ++ +C  C  C S  +N C K  +     ++ D TSR + 
Sbjct: 73  VESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTC 132

Query: 92  RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKG 151
           RG+ +Y++   ST++EY V+    V K+DP I+ +                    ++ K 
Sbjct: 133 RGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTL----------DQINKA 182

Query: 152 SSVAVLGLGTVGL 164
             +   G G   +
Sbjct: 183 FELLSSGQGVRSI 195

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 69.6 bits (169), Expect = 7e-15
 Identities = 35/169 (20%), Positives = 71/169 (42%), Gaps = 11/169 (6%)

Query: 127 DASFLSCGFTTGYGAAWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP 185
           + + L+    T Y A  K A+ +  G+ VA++G+G +G  AV   ++   A +I +D   
Sbjct: 8   EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKE 67

Query: 186 WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKV 245
            K +  +  G    ++   +P     + V  +T G GV+   +  G  + +         
Sbjct: 68  EKLKLAERLGADHVVDARRDP----VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGR 123

Query: 246 GKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLD 294
             G++I++G G +   P   +       + +G+  G      +L  L+ 
Sbjct: 124 M-GRLIIVGYGGELRFPTIRVIS--SEVSFEGSLVGNYV---ELHELVT 166

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 68.7 bits (167), Expect = 2e-14
 Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLDSTSRMS 90
           +VES G+ V  V+ GD VIP +  +C +C  C     N CLK  +++  G M D TSR +
Sbjct: 72  IVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFT 131

Query: 91  VRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEK 150
            RG+ ++H    ST+S+Y V+D   V K+D +   +    ++               +  
Sbjct: 132 CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAF--ALDPLITHVLPFEKINEG-FDLLRS 188

Query: 151 GSSVAVLG 158
           G S+  + 
Sbjct: 189 GESIRTIL 196

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 65.8 bits (159), Expect = 1e-13
 Identities = 35/179 (19%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 121 PSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIG 180
           P    +  + L C   T Y    +  +   G  V V+G+G +G            A ++ 
Sbjct: 2   PQEQLAAVAPLLCAGITTYSP-LRHWQAGPGKKVGVVGIGGLG-HMGIKLAHAMGAHVVA 59

Query: 181 IDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEAL 240
              +  K+E  KA G  + +N  +              H    D+       P  L +  
Sbjct: 60  FTTSEAKREAAKALGADEVVNSRNADEM--------AAHLKSFDFILNTVAAPHNLDDFT 111

Query: 241 ETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNK 299
              K   G + ++G          V  L    R + G+  GGI    +   +LD C   
Sbjct: 112 TLLKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIP---ETQEMLDFCAEH 166

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 2e-13
 Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 8/148 (5%)

Query: 131 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK 190
           LS G       A +   V  G  V V G G +G+  +  A+  GAA+++  D +  +  K
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 191 GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKV 250
            K  G    +    E  + I+  V+    G   +   ECTG  + +   +  T+ G   V
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVE-GQLGCKPEVTIECTGAEASIQAGIYATRSGGTLV 125

Query: 251 IVIGVGVDAMVPLNVIALACGGRTLKGT 278
           +V        VPL   A+      +KG 
Sbjct: 126 LVGLGSEMTTVPLLHAAI--REVDIKGV 151

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 57.8 bits (138), Expect = 8e-11
 Identities = 37/172 (21%), Positives = 60/172 (34%), Gaps = 12/172 (6%)

Query: 123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID 182
           ++ ++ + + C   T Y    K+     G  VA+ G+G +G  AV  AR  G   +  ID
Sbjct: 1   VEFAEIAPILCAGVTVYK-GLKQTNARPGQWVAISGIGGLGHVAVQYARAMG-LHVAAID 58

Query: 183 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242
            +  K E  +  G +  +N   E                G           S   +A+  
Sbjct: 59  IDDAKLELARKLGASLTVNARQEDPV-----EAIQRDIGGAHGVLVTAVSNSAFGQAIGM 113

Query: 243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLD 294
            + G    +V     D   P+  + L   G  + G+  G      DL   LD
Sbjct: 114 ARRGGTIALVGLPPGDFPTPIFDVVL--KGLHIAGSIVGTRA---DLQEALD 160

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 58.0 bits (139), Expect = 1e-10
 Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 29/153 (18%)

Query: 32  VVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKY-PIALNGLMLDSTSRMS 90
           ++E+ G  V E++ GD V+ +Y   C +C  C +     C ++     +G   +    + 
Sbjct: 67  IIEAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALC 125

Query: 91  VRGQKLY--HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV 148
              Q +   H F+ S+++ Y +   N  VKV                             
Sbjct: 126 THDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQL-------------------- 165

Query: 149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGI 181
                V       +   A+D  +      II I
Sbjct: 166 -----VKFYAFDEINQAAIDSRKGITLKPIIKI 193

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 52.0 bits (123), Expect = 9e-09
 Identities = 40/180 (22%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID 182
           +   +A+ + C   T Y  A K    + G  VA+ G+G +G  AV  A+  G   ++ +D
Sbjct: 1   LSFEEAAPIFCAGVTTYK-ALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVD 58

Query: 183 KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALET 242
               K E  K  G    +NP  E                GV               A  +
Sbjct: 59  IGDEKLELAKELGADLVVNPLKEDAAKFM-----KEKVGGVHAAVVTAVSKPAFQSAYNS 113

Query: 243 TKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKEFK 302
            + G   V+V     +  +P+    L   G  + G+  G   T+ DL   L      + K
Sbjct: 114 IRRGGACVLVGLPPEEMPIPIFDTVL--NGIKIIGSIVG---TRKDLQEALQFAAEGKVK 168

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.8 bits (123), Expect = 1e-08
 Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 15/133 (11%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGD-IVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G ++ GKVV+        +K G  + +   +  C EC+ C ++    C K+    +    
Sbjct: 67  GHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYE 126

Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 143
           D                S   ++ Y+ +  ++VV +  +I          G    +    
Sbjct: 127 D-------------GYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAF-ERM 172

Query: 144 KEAKVEKGSSVAV 156
           ++  V    ++  
Sbjct: 173 EKGDVRYRFTLVG 185

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 50.7 bits (120), Expect = 3e-08
 Identities = 16/121 (13%), Positives = 31/121 (25%), Gaps = 17/121 (14%)

Query: 57  CKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-- 114
           C  C +C    T +CL    A  G                         +EY+++     
Sbjct: 96  CGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDW----------TGGQAEYVLVPYADF 145

Query: 115 YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHG 174
            ++K+       +   ++        +    A    G        G      +D  +   
Sbjct: 146 NLLKLPDRDKAMEKINIAEVVGVQVISLDD-APRGYG----EFDAGVPKKFVIDPHKTFS 200

Query: 175 A 175
           A
Sbjct: 201 A 201

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 49.9 bits (118), Expect = 4e-08
 Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 14/120 (11%)

Query: 38  DEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL 96
           D+V++   GD+V +   +  CK CE C   + N C       N    D            
Sbjct: 71  DQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPG--------- 121

Query: 97  YHIFSCSTWSEYMVIDANYVVKVDPSIDPSD-ASFLSCGFTTGYGAAWKEAKVEKGSSVA 155
               +   +S+ +V+   YV+++  +      A  ++  +        K   V    ++ 
Sbjct: 122 ---HTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTLT 178

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 49.7 bits (117), Expect = 7e-08
 Identities = 24/184 (13%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 127 DASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW 186
           +A+     + T + +  +  ++  G  V +         A         A+I     +  
Sbjct: 2   EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 61

Query: 187 KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVG 246
           K+E     G+    +         ++ +  +T G GVD           +   ++    G
Sbjct: 62  KREMLSRLGVEYVGDSRSV---DFADEILELTDGYGVDVVLNSLA-GEAIQRGVQILAPG 117

Query: 247 KGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI------KTKSDLPTLLDKCKNKE 300
              + +    V A   L + ALA    +               + +  L  +L    + +
Sbjct: 118 GRFIELGKKDVYADASLGLAALA-KSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGK 176

Query: 301 FKLH 304
            ++ 
Sbjct: 177 LEVL 180

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 48.2 bits (113), Expect = 2e-07
 Identities = 23/173 (13%), Positives = 55/173 (31%), Gaps = 10/173 (5%)

Query: 123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID 182
           ++  +A+ L+C   T Y A  ++A ++   ++ V+G G              +   I   
Sbjct: 1   LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGV 59

Query: 183 KNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE 241
               +  +  K  G    IN   +    ++E+ +                     + ++ 
Sbjct: 60  DVREEAVEAAKRAGADYVINASMQDP--LAEIRRITESKGVDAVIDLNNSEK---TLSVY 114

Query: 242 TTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLD 294
              + K    V+     A +  +   +        G+  G    +SD   ++ 
Sbjct: 115 PKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVG---NQSDFLGIMR 164

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 47.7 bits (112), Expect = 3e-07
 Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 20/126 (15%)

Query: 33  VESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVR 92
           V   G  VK +K+GD V       C+ C+ C     NLC                     
Sbjct: 69  VVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC--------------- 113

Query: 93  GQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGS 152
                        + Y V  A++  K+  + +       S         A++ A+ +  +
Sbjct: 114 ----ATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD-AFEAARKKADN 168

Query: 153 SVAVLG 158
           ++ V+ 
Sbjct: 169 TIKVMI 174

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.6 bits (112), Expect = 3e-07
 Identities = 28/134 (20%), Positives = 41/134 (30%), Gaps = 24/134 (17%)

Query: 25  GTKVSGKVVESAGDEVKEVKEGDIV-IPTYIGECKECENCTSEMTNLCLKYPIALNGLML 83
           G +  G V    G  V  VKEGD V IP     C  CE+C +    LC            
Sbjct: 65  GHEGVGYVAAV-GSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN------- 116

Query: 84  DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAW 143
                                ++EY++ D NYV  +  ++  +                 
Sbjct: 117 -------------TGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM- 162

Query: 144 KEAKVEKGSSVAVL 157
             A   +G  V  +
Sbjct: 163 -RAGQIEGRIVLEM 175

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 3e-05
 Identities = 19/125 (15%), Positives = 31/125 (24%), Gaps = 26/125 (20%)

Query: 34  ESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRG 93
           E  G  VK +K GD V        +  E C     NL                       
Sbjct: 76  EKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATP------------- 122

Query: 94  QKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF--LSCGFTTGYGAAWKEAKVEKG 151
                         +   +A +  K+  ++ P       L          A++  K   G
Sbjct: 123 ------PDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKALE-----AFETFKKGLG 171

Query: 152 SSVAV 156
             + +
Sbjct: 172 LKIML 176

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	335
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.96
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.94
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.94
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.93
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.93
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.93
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.91
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.9
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.9
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.9
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.89
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.88
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.88
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.88
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.87
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.87
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.86
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.86
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.85
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.84
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.84
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.84
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.83
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.83
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.81
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.78
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.75
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.7
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.58
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.53
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.46
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.44
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.42
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.3
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	98.35
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.27
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.08
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.07
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.84
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.84
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.75
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.7
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.55
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.54
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.53
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.5
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.46
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.45
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.41
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.41
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.34
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.32
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.3
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.29
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.26
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.26
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.25
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.21
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.19
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.18
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.13
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.12
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.12
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.12
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.07
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.07
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.06
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.01
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.01
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.98
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.97
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.96
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.96
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.93
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.91
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.91
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.91
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.89
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.88
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.87
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.87
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.84
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.84
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.83
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.83
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.82
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.82
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.81
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.81
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.78
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.78
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.76
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.76
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.76
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.73
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.71
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.68
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.68
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.67
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.64
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.63
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.62
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.59
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.58
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.55
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.55
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.53
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.52
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.52
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.5
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.47
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.46
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.46
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.46
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.45
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.42
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.42
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.41
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.38
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.38
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.38
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.33
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.31
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.3
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.29
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.28
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.24
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.24
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.18
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.17
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	96.1
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.04
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.0
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.99
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.98
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.93
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.87
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.82
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.81
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.79
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.74
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.73
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.69
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.69
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	95.66
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.65
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.64
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.55
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.51
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.48
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.45
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.42
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.4
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.34
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.32
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.29
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.24
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.23
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.19
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.15
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.13
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.12
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.11
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.08
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	95.07
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.03
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.01
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	94.98
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	94.91
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.9
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.87
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.86
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.84
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	94.83
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.8
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.78
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	94.74
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.72
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.68
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.68
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.68
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.66
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	94.6
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.53
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.51
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.51
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.5
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.45
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.45
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	94.43
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.37
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.33
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	94.31
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.3
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	94.3
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.18
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	94.14
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	94.1
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.03
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	93.97
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.97
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	93.88
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.7
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.7
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.69
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	93.66
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	93.64
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	93.61
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.58
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	93.56
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	93.45
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.43
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.35
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	93.29
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.29
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	93.28
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.26
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.25
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	93.21
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.08
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	93.02
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	92.96
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	92.89
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	92.84
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.82
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.82
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.75
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.7
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	92.68
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.67
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	92.67
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.63
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	92.61
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	92.58
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.53
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	92.41
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	92.39
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.39
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	92.38
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.32
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	92.28
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	92.24
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.21
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.15
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.08
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	92.03
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	91.96
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	91.96
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	91.9
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	91.81
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	91.8
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	91.76
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	91.7
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	91.61
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.61
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.61
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	91.56
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.53
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	91.4
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.33
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	91.33
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	91.28
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.22
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.17
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	91.1
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	91.1
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	91.06
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	91.05
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.03
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	90.84
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	90.81
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	90.79
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	90.71
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	90.71
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	90.66
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	90.6
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	90.57
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	90.54
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	90.33
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	90.32
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.29
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.27
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.26
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	90.04
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.79
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	89.78
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	89.69
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	89.64
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	89.47
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.47
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	89.4
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	89.39
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	89.38
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	89.35
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	89.32
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	89.15
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	89.08
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.08
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	89.02
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	88.96
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.65
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	88.63
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.58
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	88.53
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	88.36
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.35
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	88.33
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	88.16
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	88.16
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	88.11
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.06
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	87.97
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.87
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	87.86
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	87.52
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.3
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.13
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	87.1
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	87.09
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	86.98
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	86.58
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	86.52
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	86.43
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.34
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	86.21
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	86.2
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	86.11
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	86.03
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.83
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	85.71
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	85.67
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	85.61
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	85.57
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.11
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	85.08
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.05
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	85.04
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	85.04
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	84.98
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	84.74
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	84.73
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	84.59
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	84.47
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	84.19
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	84.13
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	84.06
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	83.99
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	83.99
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	83.98
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	83.86
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	83.65
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	83.64
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	83.62
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	83.55
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	83.55
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.37
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	83.28
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	83.26
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.12
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	83.1
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	82.83
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	82.65
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	82.48
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	82.28
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	82.15
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	82.06
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	82.02
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	81.83
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.71
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.65
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.54
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	81.52
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	81.39
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	81.26
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	80.76
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	80.48
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	80.3
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	80.18

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.96  E-value=4.9e-29  Score=204.56  Aligned_cols=173  Identities=31%  Similarity=0.469  Sum_probs=158.7

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  202 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~  202 (335)
                      ++++.|+.++|++.|||+++++.++++++++|||+|+|++|++++|+++.+|+++|++++++++|++.++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            35678999999999999999999999999999999999999999999999999888899999999999999999999999


Q ss_pred             CCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeecc
Q 019822          203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFG  281 (335)
Q Consensus       203 ~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~  281 (335)
                      ++   .++.+.+++++++ ++|+||||+|++..++.+++.++++ |+++.+|.... ...+++...++++++++.|+.++
T Consensus        81 ~~---~~~~~~i~~~t~g-g~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g  155 (174)
T d1f8fa2          81 KT---QDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  155 (174)
T ss_dssp             TT---SCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             CC---cCHHHHHHHHcCC-CCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEec
Confidence            88   8899999999988 9999999999988899999999998 99999997654 56788888999999999999888


Q ss_pred             CCCCcCcHHHHHHHHhCCC
Q 019822          282 GIKTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       282 ~~~~~~~~~~~~~~i~~~~  300 (335)
                      +...+++++++++++++|+
T Consensus       156 ~~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         156 SGSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             GSCHHHHHHHHHHHHHTTS
T ss_pred             CCChHHHHHHHHHHHHcCC
Confidence            7666678999999999986

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.3e-28  Score=198.95  Aligned_cols=168  Identities=25%  Similarity=0.284  Sum_probs=149.4

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  201 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~  201 (335)
                      +|+++||++++++.|||++|++.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5789999999999999999988899999999999996 9999999999999999 9999999999999999999999999


Q ss_pred             CCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeecc
Q 019822          202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  281 (335)
Q Consensus       202 ~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  281 (335)
                      +++   .++.+.+++.++++++|++||++|++ .++.++++++++ |+++.+|...  ..+++...++.+++++.|+.+.
T Consensus        80 ~~~---~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~k~~~i~g~~~~  152 (174)
T d1yb5a2          80 HRE---VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHG-GRVIVVGSRG--TIEINPRDTMAKESSIIGVTLF  152 (174)
T ss_dssp             TTS---TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEE-EEEEECCCCS--CEEECTHHHHTTTCEEEECCGG
T ss_pred             ccc---ccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCC-CEEEEEecCC--CCCCCHHHHHHCCCEEEEEEec
Confidence            998   88999999999999999999999975 889999999998 9999998754  4667777888899999998754


Q ss_pred             CCCCcCcHHHHHHHHhCC
Q 019822          282 GIKTKSDLPTLLDKCKNK  299 (335)
Q Consensus       282 ~~~~~~~~~~~~~~i~~~  299 (335)
                      +. .++++++++++++++
T Consensus       153 ~~-~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         153 SS-TKEEFQQYAAALQAG  169 (174)
T ss_dssp             GC-CHHHHHHHHHHHHHH
T ss_pred             CC-CHHHHHHHHHHHHHH
Confidence            42 345677777776553

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=2.1e-27  Score=194.19  Aligned_cols=173  Identities=39%  Similarity=0.647  Sum_probs=149.2

Q ss_pred             CcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCC
Q 019822          124 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  203 (335)
Q Consensus       124 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~  203 (335)
                      ++++||.++|++.|+|+++.+.++++++++|||+|+|++|++++|+++.+|+++|++++.+++|++.++++|++++++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            45789999999999999998999999999999999999999999999999998999999999999999999999999875


Q ss_pred             CCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC
Q 019822          204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  283 (335)
Q Consensus       204 ~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  283 (335)
                      .  .++....+.+.+.+.|+|++|||+|++..++.++++++++.|+++.+|... ...+++...++ .+.++.|+.++++
T Consensus        82 ~--~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~-~~~~i~~~~~~-~~k~i~Gs~~Gs~  157 (174)
T d1e3ia2          82 E--LDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV-DEMTIPTVDVI-LGRSINGTFFGGW  157 (174)
T ss_dssp             G--CSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS-SEEEEEHHHHH-TTCEEEECSGGGC
T ss_pred             c--chhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCC-CccccchHHHh-ccCEEEEEEeeCC
Confidence            4  122444555555556999999999999899999999988328999999876 46677777766 5678999999888


Q ss_pred             CCcCcHHHHHHHHhCCC
Q 019822          284 KTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       284 ~~~~~~~~~~~~i~~~~  300 (335)
                      ..+.+++++++++++||
T Consensus       158 ~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         158 KSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHCcC
Confidence            77788999999998886

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.95  E-value=7.6e-27  Score=191.12  Aligned_cols=172  Identities=38%  Similarity=0.659  Sum_probs=144.7

Q ss_pred             cccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCC
Q 019822          125 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  204 (335)
Q Consensus       125 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~  204 (335)
                      |.+||++.|++.|+|++++++++++++++|||+|+|++|++++|+++++|+++|++++++++|+++++++|+++++|+++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            56799999999999999989999999999999999999999999999999889999999999999999999999999765


Q ss_pred             CCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCC
Q 019822          205 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGI  283 (335)
Q Consensus       205 ~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~  283 (335)
                        .+++...+.+.+.+.++|++||++|++..+...+..+.+++|+++.+|.... ..++++...+. +++++.|+.+++.
T Consensus        82 --~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~-~~~~i~Gs~~G~~  158 (174)
T d1p0fa2          82 --YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLL-TGRSLKGSVFGGF  158 (174)
T ss_dssp             --CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHH-TTCEEEECSGGGC
T ss_pred             --chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHh-CCCEEEEEEeCCC
Confidence              1223444444444559999999999998888888888663389999998654 55666655554 7889999988875


Q ss_pred             CCcCcHHHHHHHHhCCC
Q 019822          284 KTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       284 ~~~~~~~~~~~~i~~~~  300 (335)
                      . .++++++++++++||
T Consensus       159 ~-~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         159 K-GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             C-GGGHHHHHHHHHTTS
T ss_pred             C-HHHHHHHHHHHHcCC
Confidence            3 458999999999886

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=5.4e-27  Score=191.63  Aligned_cols=169  Identities=23%  Similarity=0.296  Sum_probs=154.3

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  201 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~  201 (335)
                      +|+.+||+++|++.|||+++ ++.+++++++|||+|+ |++|++++++++.+|+.+|++++++++++++++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57889999999999999987 6789999999999996 999999999999999779999999999999999999999999


Q ss_pred             CCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeecc
Q 019822          202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  281 (335)
Q Consensus       202 ~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  281 (335)
                      +++   .++.+.+++.+.+.++|++|||+|++..++.++++++++ |+++.+|... .+.+++...++++++++.|+..+
T Consensus        80 ~~~---~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~i~i~Gs~~~  154 (170)
T d1jvba2          80 ASM---QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFG-ADLHYHAPLITLSEIQFVGSLVG  154 (170)
T ss_dssp             TTT---SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSC-CCCCCCHHHHHHHTCEEEECCSC
T ss_pred             cCC---cCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEecccc-CccccCHHHHHhCCcEEEEEecC
Confidence            887   788899999998889999999999988889999999998 9999999876 46788888888999999998765


Q ss_pred             CCCCcCcHHHHHHHHhCCC
Q 019822          282 GIKTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       282 ~~~~~~~~~~~~~~i~~~~  300 (335)
                      +   +++++++++++++||
T Consensus       155 ~---~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         155 N---QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             C---HHHHHHHHHHHHTTS
T ss_pred             C---HHHHHHHHHHHHcCC
Confidence            4   578999999999986

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.94  E-value=4.3e-27  Score=192.51  Aligned_cols=171  Identities=30%  Similarity=0.449  Sum_probs=147.2

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  202 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~  202 (335)
                      +|+++|+.++++++|+|+++ +.++++++++|||+|+|++|++++|+||.+|+++|++++++++|++.++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            47889999999999999986 77999999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-ccccchhH--HHhhcCcEEEEee
Q 019822          203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVI--ALACGGRTLKGTT  279 (335)
Q Consensus       203 ~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~--~~~~~~~~~~g~~  279 (335)
                      ++   .++.+.++++++++|+|+||||+|++..++.++++++++ |+++.+|.... ...+++..  ....+++++.++.
T Consensus        80 ~~---~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~  155 (174)
T d1jqba2          80 KN---GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGL  155 (174)
T ss_dssp             GG---SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBC
T ss_pred             cc---hhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEec
Confidence            87   788999999999999999999999987899999999997 99999997654 33343332  2344788998886


Q ss_pred             ccCCCCcCcHHHHHHHHhCCC
Q 019822          280 FGGIKTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       280 ~~~~~~~~~~~~~~~~i~~~~  300 (335)
                      .+.  .+..++.+++++++|+
T Consensus       156 ~~~--~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         156 CPG--GRLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCC--HHHHHHHHHHHHHTTS
T ss_pred             CCC--CcccHHHHHHHHHcCC
Confidence            543  2345677888888875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=6.5e-27  Score=193.23  Aligned_cols=172  Identities=27%  Similarity=0.315  Sum_probs=147.8

Q ss_pred             cccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCC
Q 019822          125 PSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  204 (335)
Q Consensus       125 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~  204 (335)
                      ++.+|.+.|+.+|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++.+
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~   82 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc
Confidence            45678889999999999988889999999999999999999999999999878999999999999999999999999887


Q ss_pred             CCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-ccccchhHH-HhhcCcEEEEeeccC
Q 019822          205 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIA-LACGGRTLKGTTFGG  282 (335)
Q Consensus       205 ~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~-~~~~~~~~~g~~~~~  282 (335)
                      +...++.+.+++++++.++|+||||+|++..++.++++++++ |+++.+|.... .+.+++... +++|++++.|+..++
T Consensus        83 ~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          83 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence            333445667888888889999999999987889999999998 99999997654 555666544 667999999987543


Q ss_pred             CCCcCcHHHHHHHHhCCC
Q 019822          283 IKTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       283 ~~~~~~~~~~~~~i~~~~  300 (335)
                         +.++++++++++++.
T Consensus       162 ---~~~~~~~~~~i~~~~  176 (182)
T d1vj0a2         162 ---TSHFVKTVSITSRNY  176 (182)
T ss_dssp             ---HHHHHHHHHHHHTCH
T ss_pred             ---HHHHHHHHHHHHHCh
Confidence               567888999988763

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=3.7e-27  Score=194.89  Aligned_cols=173  Identities=18%  Similarity=0.268  Sum_probs=147.7

Q ss_pred             ccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCC
Q 019822          126 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDD  204 (335)
Q Consensus       126 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~  204 (335)
                      ++||+++++++|||+++++.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            4789999999999999999999999999999986 9999999999999999 9999999999999999999999999988


Q ss_pred             CCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccCC
Q 019822          205 EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGGI  283 (335)
Q Consensus       205 ~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~  283 (335)
                         .++.+.++++++++++|++|||+|++ .++.++++++++ |+++.+|.... ....+....+ .+++++.+......
T Consensus        80 ---~~~~~~v~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  153 (183)
T d1pqwa_          80 ---VDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPG-GRFIELGKKDVYADASLGLAAL-AKSASFSVVDLDLN  153 (183)
T ss_dssp             ---STHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGG-TTTCEEEECCHHHH
T ss_pred             ---cCHHHHHHHHhCCCCEEEEEecccch-HHHHHHHHhcCC-CEEEEEccCCCCCCcccchHHH-hCCcEEEEEEccce
Confidence               88999999999999999999999986 889999999998 99999987665 2233333333 48888887754321


Q ss_pred             C------CcCcHHHHHHHHhCCCCCCCC
Q 019822          284 K------TKSDLPTLLDKCKNKEFKLHQ  305 (335)
Q Consensus       284 ~------~~~~~~~~~~~i~~~~~~~~~  305 (335)
                      .      .++.++++++++++|++++.|
T Consensus       154 ~~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         154 LKLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             eccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence            1      134577888999999988754

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=2.4e-26  Score=188.71  Aligned_cols=174  Identities=41%  Similarity=0.626  Sum_probs=143.2

Q ss_pred             CcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCC
Q 019822          124 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  203 (335)
Q Consensus       124 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~  203 (335)
                      ++++||+++|++.|+|+++.++++++++++|||+|+|++|++++|+++.+|+++|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            46789999999999999998889999999999999999999999999999988999999999999999999999999886


Q ss_pred             CCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccC
Q 019822          204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGG  282 (335)
Q Consensus       204 ~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~  282 (335)
                      + ...+..+.+++.+++ ++|+|||++|++..++.+...++++ ++++.++.... .....+....+.+++++.|+.+++
T Consensus        82 ~-~~~~~~~~~~~~~~~-g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          82 D-FSKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             G-CSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             c-hhhHHHHHHHHHcCC-CCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeC
Confidence            4 113344555555544 9999999999988888899999887 78777754443 233333333334889999999888


Q ss_pred             CCCcCcHHHHHHHHhCCC
Q 019822          283 IKTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       283 ~~~~~~~~~~~~~i~~~~  300 (335)
                      ....+++.++++++++||
T Consensus       159 ~~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 WKSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CcHHHHHHHHHHHHHcCC
Confidence            766778999999999886

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-25  Score=183.82  Aligned_cols=169  Identities=21%  Similarity=0.348  Sum_probs=145.5

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  202 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~  202 (335)
                      +|+++||++. ++++||+++ ++++++++++|+|+|+|++|++++|+++.+|+++|++++++++|+++++++|+++++++
T Consensus         1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            4788888764 889999986 77899999999999999999999999999999899999999999999999999999988


Q ss_pred             CCCCchhHHHHHHh--hhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeec
Q 019822          203 DDEPNKSISELVKG--ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF  280 (335)
Q Consensus       203 ~~~~~~~~~~~i~~--~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~  280 (335)
                      .+   .+..+..+.  .+.+.++|++|||+|++..++.++++++++ |+++.+|... ...+++...+++|++++.|+..
T Consensus        79 ~~---~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~-~~~~~~~~~~~~k~l~i~Gs~~  153 (171)
T d1pl8a2          79 SK---ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGS-EMTTVPLLHAAIREVDIKGVFR  153 (171)
T ss_dssp             SS---CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCC-SCCCCCHHHHHHTTCEEEECCS
T ss_pred             cc---cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCC-CCCccCHHHHHHCCcEEEEEeC
Confidence            76   444333332  234558999999999998899999999998 9999999876 4678888999999999998752


Q ss_pred             cCCCCcCcHHHHHHHHhCCCCC
Q 019822          281 GGIKTKSDLPTLLDKCKNKEFK  302 (335)
Q Consensus       281 ~~~~~~~~~~~~~~~i~~~~~~  302 (335)
                          ..++++++++++++|+++
T Consensus       154 ----~~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         154 ----YCNTWPVAISMLASKSVN  171 (171)
T ss_dssp             ----CSSCHHHHHHHHHTTSCC
T ss_pred             ----CHhHHHHHHHHHHcCCCC
Confidence                246899999999999864

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.94  E-value=6.1e-26  Score=185.61  Aligned_cols=166  Identities=20%  Similarity=0.280  Sum_probs=147.3

Q ss_pred             cccccccccchhhhhHHHHHhc-CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCC
Q 019822          125 PSDASFLSCGFTTGYGAAWKEA-KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  203 (335)
Q Consensus       125 ~~~aa~l~~~~~ta~~~l~~~~-~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~  203 (335)
                      +.++|+++|+++|||+++.+.. .++++++|||+|+|++|++++|+++.+|+.+|++++++++|++.++++|+++++++.
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            5678999999999999997765 479999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC
Q 019822          204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  283 (335)
Q Consensus       204 ~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  283 (335)
                      +   . ..+.+.+.+++.++|+||||+|+...++.++++++++ |+++.+|...  ..+++...++++++++.|+..++ 
T Consensus        86 ~---~-~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~--~~~~~~~~l~~k~~~i~Gs~~~~-  157 (172)
T d1h2ba2          86 R---D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGG--ELRFPTIRVISSEVSFEGSLVGN-  157 (172)
T ss_dssp             S---C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCSS--CCCCCHHHHHHTTCEEEECCSCC-
T ss_pred             c---c-HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCcc--cccCCHHHHHhCCcEEEEEEecC-
Confidence            5   3 4556667788889999999999988899999999998 9999999643  57788888999999999997655 


Q ss_pred             CCcCcHHHHHHHHhCCC
Q 019822          284 KTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       284 ~~~~~~~~~~~~i~~~~  300 (335)
                        +.+++++++++++|+
T Consensus       158 --~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         158 --YVELHELVTLALQGK  172 (172)
T ss_dssp             --HHHHHHHHHHHHTTS
T ss_pred             --HHHHHHHHHHHHcCC
Confidence              578999999999886

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=3.9e-26  Score=187.12  Aligned_cols=172  Identities=39%  Similarity=0.642  Sum_probs=147.0

Q ss_pred             CcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCC
Q 019822          124 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  203 (335)
Q Consensus       124 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~  203 (335)
                      +++.||.++|++.|+|+++++.++++++++|+|+|+|++|++++|+++++|+.+|++++.+++|++.++++|+++++|++
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            57889999999999999998999999999999999999999999999999987999999999999999999999999977


Q ss_pred             CCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC-ccccchhHHHhhcCcEEEEeeccC
Q 019822          204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVPLNVIALACGGRTLKGTTFGG  282 (335)
Q Consensus       204 ~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~  282 (335)
                      +  .......+.+.+.+.|+|++||++|.+..+..++..+.+++|+++.+|.... ....+++..++ ++.+++|+.+|+
T Consensus        83 ~--~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~-~~~~i~Gs~~G~  159 (176)
T d1d1ta2          83 D--STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLF-TGRTWKGCVFGG  159 (176)
T ss_dssp             G--CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHH-TTCEEEECSGGG
T ss_pred             c--cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHh-CCCEEEEEEEeC
Confidence            5  1234566777777779999999999998888888777553389999998765 45556655555 788999999988


Q ss_pred             CCCcCcHHHHHHHHhC
Q 019822          283 IKTKSDLPTLLDKCKN  298 (335)
Q Consensus       283 ~~~~~~~~~~~~~i~~  298 (335)
                      ...+++++++++++.+
T Consensus       160 ~~~~~dip~li~~~~~  175 (176)
T d1d1ta2         160 LKSRDDVPKLVTEFLA  175 (176)
T ss_dssp             CCHHHHHHHHHHHHTT
T ss_pred             CCcHHHHHHHHHHHhC
Confidence            7777888888888654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=6.6e-26  Score=184.32  Aligned_cols=165  Identities=22%  Similarity=0.326  Sum_probs=146.8

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  202 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~  202 (335)
                      +++++||+++|++.|||+++ ++++++++++|+|+|+|++|++++|++|.+|+ +|++++++++|++.++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999997 56899999999999999999999999999998 99999999999999999999999998


Q ss_pred             CCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccC
Q 019822          203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG  282 (335)
Q Consensus       203 ~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~  282 (335)
                      .+   .++.+.+++.+.  +.+.++++++++..++.++++++++ |+++.+|... ...+++...++.+++++.|+..++
T Consensus        79 ~~---~~~~~~~~~~~~--g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~~~~~~~k~~~i~Gs~~~~  151 (166)
T d1llua2          79 RQ---EDPVEAIQRDIG--GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPP-GDFPTPIFDVVLKGLHIAGSIVGT  151 (166)
T ss_dssp             TT---SCHHHHHHHHHS--SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCS-SEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             cc---hhHHHHHHHhhc--CCcccccccccchHHHHHHHHhcCC-cEEEEEEecC-CCccCCHHHHHhCCcEEEEEeecC
Confidence            87   778888877664  4677777777777899999999998 9999999766 467888899999999999987554


Q ss_pred             CCCcCcHHHHHHHHhCC
Q 019822          283 IKTKSDLPTLLDKCKNK  299 (335)
Q Consensus       283 ~~~~~~~~~~~~~i~~~  299 (335)
                         +++++++++++++|
T Consensus       152 ---~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 ---RADLQEALDFAGEG  165 (166)
T ss_dssp             ---HHHHHHHHHHHHTT
T ss_pred             ---HHHHHHHHHHHHCc
Confidence               57899999999887

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=2.3e-26  Score=187.61  Aligned_cols=171  Identities=18%  Similarity=0.138  Sum_probs=138.4

Q ss_pred             CCcccccccccchhhhhHHH---HHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce
Q 019822          123 IDPSDASFLSCGFTTGYGAA---WKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  198 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l---~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~  198 (335)
                      +|+++||+++++++|||+++   ++..+..++++|||+|+ |+||.+++|+|+.+|+ +|+++++++++.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            58899999999999999765   45577889999999986 9999999999999999 9999999999999999999999


Q ss_pred             EeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEe
Q 019822          199 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT  278 (335)
Q Consensus       199 v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~  278 (335)
                      ++++++    .+.+.+ +.++++++|+|||++|++ .++..+++|+++ |+++.+|...+...+++...++.|++++.|.
T Consensus        80 vi~~~~----~~~~~~-~~~~~~gvD~vid~vgg~-~~~~~l~~l~~~-Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED----VMAERI-RPLDKQRWAAAVDPVGGR-TLATVLSRMRYG-GAVAVSGLTGGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC--------------CCSCCEEEEEECSTTT-THHHHHHTEEEE-EEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch----hHHHHH-HHhhccCcCEEEEcCCch-hHHHHHHHhCCC-ceEEEeecccCcccCCCHHHHHHCCcEEEEE
Confidence            999874    333333 455666999999999998 889999999998 9999999987777889999999999999997


Q ss_pred             eccCCCCcCcHHHHHHHHhCCCCCC
Q 019822          279 TFGGIKTKSDLPTLLDKCKNKEFKL  303 (335)
Q Consensus       279 ~~~~~~~~~~~~~~~~~i~~~~~~~  303 (335)
                      +... ..++....+++.+ .++++|
T Consensus       153 ~~~~-~~~~~~~~~~~~l-ag~lkP  175 (176)
T d1xa0a2         153 DSVY-CPMDLRLRIWERL-AGDLKP  175 (176)
T ss_dssp             CSSS-CCHHHHHHHHHHH-HTTTCC
T ss_pred             eCCc-CCHHHHHHHHHHH-hcccCC
Confidence            5322 1234445555555 366665

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=1.8e-26  Score=192.90  Aligned_cols=150  Identities=27%  Similarity=0.372  Sum_probs=135.6

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~   84 (335)
                      |++.+.|..+...+|.++| ||+ +|+|+++|+++++|++||||++.+...|+.|++|+.|+++.|.+..... .+...+
T Consensus        49 D~~~~~g~~~~~~~p~i~G-hE~-~G~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~  126 (199)
T d1cdoa1          49 DLYHLFEGKHKDGFPVVLG-HEG-AGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSP  126 (199)
T ss_dssp             HHHHHHTTCCTTSCSEECC-CCE-EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSC
T ss_pred             hhhhhhhcccccccccccc-ccc-ceEEEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccC
Confidence            6677778777777899999 999 9999999999999999999999999999999999999999999876643 345567


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                      +..+...+|...++..+.|+|+||+.++++.++++|++++++++|++.+++.|++.++......+.+++|||+
T Consensus       127 ~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         127 KETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             SCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             cccceeeccceeecccccCCceEEEEEchHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            7777888899888888889999999999999999999999999999999999999999877888899999984

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=1.4e-25  Score=183.99  Aligned_cols=174  Identities=40%  Similarity=0.614  Sum_probs=146.0

Q ss_pred             CcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCC
Q 019822          124 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  203 (335)
Q Consensus       124 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~  203 (335)
                      ++++||+++|++.|+|+++++.++++++++|+|+|+|++|.+++++++..|+.+|++++++++|++.++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            46789999999999999999999999999999999999999999999999988999999999999999999999999986


Q ss_pred             CCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC
Q 019822          204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  283 (335)
Q Consensus       204 ~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  283 (335)
                      +  ..+....+++.+.+.++|+++|++|+...+..++.++.+++++++..+... .....+...++.++.++.|+..++.
T Consensus        82 ~--~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~-~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (175)
T d1cdoa2          82 D--HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD-LHDVATRPIQLIAGRTWKGSMFGGF  158 (175)
T ss_dssp             G--CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS-SSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             C--cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC-CcccCccHHHHHCCcEEEEEEEeCC
Confidence            5  133456667777667999999999998788888888777524455555544 3444455555668999999998887


Q ss_pred             CCcCcHHHHHHHHhCCC
Q 019822          284 KTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       284 ~~~~~~~~~~~~i~~~~  300 (335)
                      ..+++++++++++.+||
T Consensus       159 ~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         159 KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence            66788999999999886

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=1.8e-25  Score=183.42  Aligned_cols=175  Identities=38%  Similarity=0.575  Sum_probs=142.8

Q ss_pred             CcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCC
Q 019822          124 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  203 (335)
Q Consensus       124 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~  203 (335)
                      ++++||+++|++.|+|+++++.+++++|++|||+|+|++|++++++++.+|+.+|++++++++|+++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            46789999999999999999999999999999999999999999999999988999999999999999999999998875


Q ss_pred             CCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccCC
Q 019822          204 DEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGGI  283 (335)
Q Consensus       204 ~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  283 (335)
                      +  ..+......+.+.+.|+|++||++|.+..++.++..+.+++|+++..+.............++.+++++.|+.+++.
T Consensus        82 ~--~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  159 (176)
T d2jhfa2          82 D--YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGF  159 (176)
T ss_dssp             G--CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             C--chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCC
Confidence            4  13344444454555599999999999988889999998862444444444333333333345559999999999887


Q ss_pred             CCcCcHHHHHHHHhCCC
Q 019822          284 KTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       284 ~~~~~~~~~~~~i~~~~  300 (335)
                      ..+++++++++++.+||
T Consensus       160 ~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         160 KSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHHCcC
Confidence            77788999999998876

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=4.7e-25  Score=179.56  Aligned_cols=168  Identities=23%  Similarity=0.351  Sum_probs=149.4

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  202 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~  202 (335)
                      +|+++||++++++.|||+++ ++++++++++|||+|+|++|++++++++..|+ +|++++++++|+++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            57899999999999999987 57899999999999999999999999999999 99999999999999999999999999


Q ss_pred             CCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccC
Q 019822          203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG  282 (335)
Q Consensus       203 ~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~  282 (335)
                      .+   .++.+.+++.+.+  .+.+++++++...++.++++++++ |+++.+|... ...+++...++.+++++.|+..++
T Consensus        79 ~~---~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~-~~~~~~~~~~~~~~~~i~gs~~~~  151 (168)
T d1rjwa2          79 LK---EDAAKFMKEKVGG--VHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPP-EEMPIPIFDTVLNGIKIIGSIVGT  151 (168)
T ss_dssp             TT---SCHHHHHHHHHSS--EEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCS-SEEEEEHHHHHHTTCEEEECCSCC
T ss_pred             cc---chhhhhcccccCC--CceEEeecCCHHHHHHHHHHhccC-CceEeccccc-CCCCCCHHHHHHCCcEEEEEeeCC
Confidence            88   7888889988865  555566667777899999999997 9999999876 467788888899999999987543


Q ss_pred             CCCcCcHHHHHHHHhCCCCC
Q 019822          283 IKTKSDLPTLLDKCKNKEFK  302 (335)
Q Consensus       283 ~~~~~~~~~~~~~i~~~~~~  302 (335)
                         +++++++++++++|+++
T Consensus       152 ---~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 ---RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             ---HHHHHHHHHHHHTTSCC
T ss_pred             ---HHHHHHHHHHHHhCCCC
Confidence               57899999999999864

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.93  E-value=1.8e-25  Score=184.48  Aligned_cols=165  Identities=19%  Similarity=0.130  Sum_probs=141.7

Q ss_pred             cccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCc
Q 019822          129 SFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  207 (335)
Q Consensus       129 a~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~  207 (335)
                      ++++++++|||++|++.+++++|++|||+|+ |++|++++|+||..|+ +|+++++++++.++++++|+++++++++   
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~---   83 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT---   83 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS---
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc---
Confidence            4677889999999999999999999999987 9999999999999999 9999999999999999999999999988   


Q ss_pred             hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC------ccccchhHHHhhcCcEEEEeecc
Q 019822          208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD------AMVPLNVIALACGGRTLKGTTFG  281 (335)
Q Consensus       208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~g~~~~  281 (335)
                      .++.+.+.+.++++++|+|||++|++ .++.++++++++ |+++.+|....      ....+++..++.+++++.|+...
T Consensus        84 ~~~~~~~~~~~~~~Gvd~v~D~vG~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~  161 (182)
T d1v3va2          84 VNSLEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY  161 (182)
T ss_dssp             CSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGG
T ss_pred             ccHHHHHHHHhhcCCCceeEEecCch-hhhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEe
Confidence            77778888888888999999999976 889999999998 99999986543      23456667788899999998776


Q ss_pred             CCCC---cCcHHHHHHHHhCC
Q 019822          282 GIKT---KSDLPTLLDKCKNK  299 (335)
Q Consensus       282 ~~~~---~~~~~~~~~~i~~~  299 (335)
                      ++..   .+.++++++++++|
T Consensus       162 ~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         162 RWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccChHHHHHHHHHHHHHHhCc
Confidence            6532   23366777777765

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=8.1e-26  Score=186.11  Aligned_cols=143  Identities=23%  Similarity=0.213  Sum_probs=129.2

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  201 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~  201 (335)
                      +|+++||+++++++|||++|++.++++++++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5889999999999999999988889999999999976 8899999999999999 9999999999999999999999999


Q ss_pred             CCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhc
Q 019822          202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACG  271 (335)
Q Consensus       202 ~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~  271 (335)
                      +++   .++.+.++++++++++|+++|+++++ .+..++.+++++ |+++.++.......+++...+..+
T Consensus        80 ~~~---~d~~~~v~~~t~g~g~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~  144 (179)
T d1qora2          80 YRE---EDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRR-GLMVSFGNSSGAVTGVNLGILNQK  144 (179)
T ss_dssp             TTT---SCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEE-EEEEECCCTTCCCCCBCTHHHHHT
T ss_pred             CCC---CCHHHHHHHHhCCCCeEEEEeCccHH-HHHHHHHHHhcC-CeeeecccccCCccccchhhhhcc
Confidence            998   88999999999999999999999977 789999999997 999999887765555555444433

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.93  E-value=1.2e-24  Score=177.49  Aligned_cols=168  Identities=23%  Similarity=0.397  Sum_probs=140.4

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  202 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~  202 (335)
                      +|+++||++. ++++||+++ ++++++++++|||+|+|++|++++|+|+.+|+ +|++++++++|++.++++|++.++..
T Consensus         1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            4788888774 888999986 77899999999999999999999999999999 99999999999999999999876544


Q ss_pred             CC--CCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeec
Q 019822          203 DD--EPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTF  280 (335)
Q Consensus       203 ~~--~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~  280 (335)
                      +.  ....+..+.+++.. +.++|+||||+|++..++.++++++++ |+++.+|... .+.++++..++.|++++.|+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~-g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~-~~~~~~~~~~~~k~i~i~gs~~  154 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAI-GDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS-QMVTVPLVNACAREIDIKSVFR  154 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHS-SSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCS-SCCCCCHHHHHTTTCEEEECCS
T ss_pred             cccccccchhhhhhhccc-ccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCC-CCCCcCHHHHHHCCCEEEEEEC
Confidence            32  11122334444443 459999999999988899999999998 9999999876 4677888889999999998742


Q ss_pred             cCCCCcCcHHHHHHHHhCCC
Q 019822          281 GGIKTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       281 ~~~~~~~~~~~~~~~i~~~~  300 (335)
                          +.++++++++++++|+
T Consensus       155 ----~~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         155 ----YCNDYPIALEMVASGR  170 (170)
T ss_dssp             ----CSSCHHHHHHHHHTTS
T ss_pred             ----CHHHHHHHHHHHHcCC
Confidence                2468999999999986

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=4.1e-25  Score=179.92  Aligned_cols=165  Identities=21%  Similarity=0.360  Sum_probs=137.7

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP  202 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~  202 (335)
                      .+++.+|.++|+..|+|+++ ++++++++++|||+|+|++|++++|+||.+|+ ++++++++++++++++++|+++++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEEC
Confidence            45677888999999999988 67999999999999999999999999999999 88889999999999999999999998


Q ss_pred             CCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeeccC
Q 019822          203 DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFGG  282 (335)
Q Consensus       203 ~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~  282 (335)
                      .+   .+..     ....+++|++||++|++..++.+++.++++ |+++.+|...+....++...++++++++.|+..++
T Consensus        82 ~~---~~~~-----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~  152 (168)
T d1uufa2          82 RN---ADEM-----AAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG  152 (168)
T ss_dssp             TC---HHHH-----HTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC-------CHHHHHTTTCEEEECCSCC
T ss_pred             ch---hhHH-----HHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCCCCcccccHHHHHHCCcEEEEEeecC
Confidence            87   4332     223458999999999887899999999998 99999998665455677788888999999997654


Q ss_pred             CCCcCcHHHHHHHHhCCCC
Q 019822          283 IKTKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       283 ~~~~~~~~~~~~~i~~~~~  301 (335)
                         +.+++++++++.++++
T Consensus       153 ---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 ---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             ---HHHHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHHcCC
Confidence               5788999999887653

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=2e-25  Score=182.14  Aligned_cols=148  Identities=24%  Similarity=0.349  Sum_probs=124.5

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN  201 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~  201 (335)
                      +++++||++++++.|||+++ ++++++++++|||+|+ |++|++++|+||++|+ +|+++++++++++.++++|+++++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al-~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHH-HHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            57899999999999999998 5589999999999986 9999999999999999 9999999999999999999999998


Q ss_pred             CCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeecc
Q 019822          202 PDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  281 (335)
Q Consensus       202 ~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  281 (335)
                      +.+     .   .++.++++|+|+|||++|.  .++.++++++++ |+++.+|...+...+++...++.|++++.|+...
T Consensus        79 ~~~-----~---~~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~-G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          79 YAE-----V---PERAKAWGGLDLVLEVRGK--EVEESLGLLAHG-GRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             GGG-----H---HHHHHHTTSEEEEEECSCT--THHHHHTTEEEE-EEEEEC-------CCCCTTHHHHTTCEEEECCHH
T ss_pred             hhh-----h---hhhhhccccccccccccch--hHHHHHHHHhcC-CcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCc
Confidence            765     2   3445566799999999883  579999999998 9999999876656678888888899999998765


Q ss_pred             CC
Q 019822          282 GI  283 (335)
Q Consensus       282 ~~  283 (335)
                      .+
T Consensus       148 ~~  149 (171)
T d1iz0a2         148 PL  149 (171)
T ss_dssp             HH
T ss_pred             Ch
Confidence            43

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.4e-25  Score=182.66  Aligned_cols=165  Identities=20%  Similarity=0.273  Sum_probs=139.3

Q ss_pred             CcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCC
Q 019822          124 DPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  203 (335)
Q Consensus       124 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~  203 (335)
                      +.+.||.+.|+..|+|+++ ++++++++++|||+|+|++|++++|+||.+|+ +|++++++++|++.++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            4566889999999999987 56899999999999999999999999999999 999999999999999999999999876


Q ss_pred             CCCchhHHHHHHhhhCCCCccEEEEcCCChH--HHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEeecc
Q 019822          204 DEPNKSISELVKGITHGMGVDYCFECTGVPS--LLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTTFG  281 (335)
Q Consensus       204 ~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~--~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  281 (335)
                      +  +.++.   +..  ..++|.++||+++..  .++.++++++++ |+++.+|.... ..+++..+++.+++++.|+..+
T Consensus        80 ~--~~~~~---~~~--~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~k~~~i~Gs~~g  150 (168)
T d1piwa2          80 E--EGDWG---EKY--FDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALG  150 (168)
T ss_dssp             G--TSCHH---HHS--CSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-SCCEEECGGGCBSCEEEECCCC
T ss_pred             c--hHHHH---Hhh--hcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccc-cccccHHHHHhCCcEEEEEeeC
Confidence            5  12332   222  237999999987642  467889999997 99999997664 5677777888899999998876


Q ss_pred             CCCCcCcHHHHHHHHhCCCCC
Q 019822          282 GIKTKSDLPTLLDKCKNKEFK  302 (335)
Q Consensus       282 ~~~~~~~~~~~~~~i~~~~~~  302 (335)
                      +   +++++++++++++|+++
T Consensus       151 ~---~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         151 S---IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             C---HHHHHHHHHHHHHTTCC
T ss_pred             C---HHHHHHHHHHHHhCCCC
Confidence            5   57899999999999864

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=4.4e-25  Score=183.15  Aligned_cols=175  Identities=15%  Similarity=0.115  Sum_probs=140.7

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCCCEEEEE-cC-CHHHHHHHHHHHHcCCCEEEEEcCChh----hHHHHHhcCC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL-GL-GTVGLGAVDGARMHGAAKIIGIDKNPW----KKEKGKAFGM  196 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~-G~-g~vG~~ai~la~~~G~~~V~~~~~~~~----~~~~~~~lga  196 (335)
                      +|+++||+++++++|||++|.+..++++++++||+ |+ |++|++++|+||++|+ +|+++.++.+    +.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            57899999999999999999988999999999987 55 9999999999999999 8888875543    4556789999


Q ss_pred             ceEeCCCCCCchhHHHHHHhhh--CCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcE
Q 019822          197 TDFINPDDEPNKSISELVKGIT--HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRT  274 (335)
Q Consensus       197 ~~v~~~~~~~~~~~~~~i~~~~--~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  274 (335)
                      ++++++++.....+.+.+++++  .+.++|++||++|++ .+..++++++++ |+++.+|...+.+.+++...+++++++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~l~~k~~~  157 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNN-GLMLTYGGMSFQPVTIPTSLYIFKNFT  157 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTT-CEEEECCCCSSCCEEECHHHHHHSCCE
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc-hhhhhhhhhcCC-cEEEEECCccCCCccCcHHHHHHCCcE
Confidence            9999875411234555666543  355899999999987 779999999998 999999987766778888888889999


Q ss_pred             EEEeeccCCCC------cCcHHHHHHHHhCCC
Q 019822          275 LKGTTFGGIKT------KSDLPTLLDKCKNKE  300 (335)
Q Consensus       275 ~~g~~~~~~~~------~~~~~~~~~~i~~~~  300 (335)
                      +.|+.++.+..      .+.+.++++++++|+
T Consensus       158 i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         158 SAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99986654311      234667777777764

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.91  E-value=1.6e-25  Score=184.04  Aligned_cols=121  Identities=20%  Similarity=0.252  Sum_probs=109.7

Q ss_pred             CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCcee
Q 019822           17 RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKL   96 (335)
Q Consensus        17 ~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~   96 (335)
                      ..+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|++|..|+.+.|.+..+. .+...+|           
T Consensus        55 ~~~p~i~G-hE~-~G~Vv~vG~~v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~-~~~~~~G-----------  120 (178)
T d1e3ja1          55 VKDPMVIG-HEA-SGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC-ATPPDDG-----------  120 (178)
T ss_dssp             CCSCEECC-CEE-EEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEET-TBTTBCC-----------
T ss_pred             ccCCeeec-ccc-ceEEEecCcccCCCCCCCEEEECcccccCCccccccCCccccccccce-ecccccc-----------
Confidence            36789999 999 999999999999999999999999999999999999999999987774 2223444           


Q ss_pred             ecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC
Q 019822           97 YHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL  159 (335)
Q Consensus        97 ~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~  159 (335)
                             +|+||+.+|++.++++|++++++++|++++.+.|+|+++ ++++++++++|||+|+
T Consensus       121 -------~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         121 -------NLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS  175 (178)
T ss_dssp             -------SCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred             -------ccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence                   899999999999999999999999999999999999986 7889999999999974

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.90  E-value=5.9e-25  Score=179.15  Aligned_cols=127  Identities=16%  Similarity=0.173  Sum_probs=112.8

Q ss_pred             EEeEeecCCCC---CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc
Q 019822            6 TLISFALKDSQ---RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM   82 (335)
Q Consensus         6 d~~~~~g~~~~---~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~   82 (335)
                      |++.+.|.++.   +.+|.++| ||+ +|+|+++|+++++|++||||++.+...|+.|++|+.|.+++|.+..+  .|+.
T Consensus        41 D~~~~~g~~~~~~~~~~P~v~G-hE~-~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~--~g~~  116 (171)
T d1h2ba1          41 DLHLVQGMWHELLQPKLPYTLG-HEN-VGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF--PGLN  116 (171)
T ss_dssp             HHHHHHTTTHHHHCCCSSEECC-CCE-EEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC--BTTT
T ss_pred             eehccCCCcccccCCccccccc-eee-eeeeecccCCCCcCCCCCEEEEcCccCCCCccccccccccccccccc--ceee
Confidence            44555666543   46899999 999 99999999999999999999999999999999999999999998877  4777


Q ss_pred             cCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEE
Q 019822           83 LDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAV  156 (335)
Q Consensus        83 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI  156 (335)
                      .+|                  +|+||+.++++.++++|++++++.++++.+++.|+|+++ +++.+ .|++|||
T Consensus       117 ~~G------------------~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         117 IDG------------------GFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             BCC------------------SSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             ccc------------------ccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            666                  999999999999999999999998888888999999987 56777 8999997

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.90  E-value=3.1e-24  Score=178.10  Aligned_cols=147  Identities=22%  Similarity=0.353  Sum_probs=114.7

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~   84 (335)
                      |++.+.|.++. ++|.|+| ||+ +|+|+++|++|++|++||||+..+ ..|++|.+|++|+++.|++..... .|...+
T Consensus        44 D~~~~~G~~~~-~~P~i~G-HE~-~G~V~~vG~~v~~~~vGDrVv~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~d  119 (194)
T d1f8fa1          44 DLIVRDQKYPV-PLPAVLG-HEG-SGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSE  119 (194)
T ss_dssp             HHHHHTTSSCC-CSSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSS
T ss_pred             hHhhhhhcccc-cCCcccc-cce-EEEeeecCccceeEccCceeeeec-ccccCChhhhCCCcccccccccceecccccc
Confidence            66777787764 6899999 999 999999999999999999996654 589999999999999999853321 344445


Q ss_pred             CCccccc--cCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           85 STSRMSV--RGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        85 g~~~~~~--~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                      |..+...  .+....+..++|+|+||..+++..++++|++++++++                         +++.|+|++
T Consensus       120 g~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~i~~~~~-------------------------~~i~g~g~~  174 (194)
T d1f8fa1         120 GNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQL-------------------------VKFYAFDEI  174 (194)
T ss_dssp             SCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTCCGGGG-------------------------EEEEEGGGH
T ss_pred             ceeeeecCCceeeccccccccccceeEEEehHHEEECCCCCCcccE-------------------------EEEeCcHHH
Confidence            5444332  2333445667789999999999999999999876543                         345678999


Q ss_pred             HHHHHHHHHHcCCCEEEEE
Q 019822          163 GLGAVDGARMHGAAKIIGI  181 (335)
Q Consensus       163 G~~ai~la~~~G~~~V~~~  181 (335)
                      |++++|+++.+|+++|+++
T Consensus       175 g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         175 NQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             HHHHHHHHHTSCSEEEEEC
T ss_pred             HHHHHHHHHHcCCCEEEEe
Confidence            9999999999999667665

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=1.1e-22  Score=169.00  Aligned_cols=167  Identities=27%  Similarity=0.298  Sum_probs=140.6

Q ss_pred             ccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCC
Q 019822          126 SDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDE  205 (335)
Q Consensus       126 ~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~  205 (335)
                      ++.++++.+++|||+++ ++++++++++|||+|+|++|++++++++.+|+.+|++++.+++|++.++++|+++++++.+ 
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~-   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD-   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS-
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC-
Confidence            35677888999999997 6799999999999999999999999999999989999999999999999999999999988 


Q ss_pred             CchhHHHHHHhhhCCCCccEEEEcCCC---------------hHHHHHHHHhhccCCeEEEEEccCCC-c----------
Q 019822          206 PNKSISELVKGITHGMGVDYCFECTGV---------------PSLLSEALETTKVGKGKVIVIGVGVD-A----------  259 (335)
Q Consensus       206 ~~~~~~~~i~~~~~g~g~d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~~~-~----------  259 (335)
                        .++.+.+++++++.++|++||++|.               +..++.++++++++ |+++.+|...+ .          
T Consensus        80 --~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~  156 (195)
T d1kola2          80 --TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKI  156 (195)
T ss_dssp             --SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHT
T ss_pred             --cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhc
Confidence              8899999999999999999999984               35789999999998 99999997553 1          


Q ss_pred             -cccchhHHHhhcCcEEEEeeccCCCCcCcHHHHHHHHhCCC
Q 019822          260 -MVPLNVIALACGGRTLKGTTFGGIKTKSDLPTLLDKCKNKE  300 (335)
Q Consensus       260 -~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~  300 (335)
                       ..++++..++.|++++.+   +....++.+++++++|.+++
T Consensus       157 ~~~~~~~~~~~~k~~~i~~---g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         157 GSLSIRFGLGWAKSHSFHT---GQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             TCCCCCHHHHHHTTCEEEE---SSCCHHHHHHHHHHHHHTTS
T ss_pred             CceeeeHHHHHhhcceecc---CCCchHHHHHHHHHHHHcCC
Confidence             223444556668888764   22333455778888887764

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.89  E-value=5.2e-24  Score=177.24  Aligned_cols=150  Identities=31%  Similarity=0.476  Sum_probs=129.4

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~   84 (335)
                      |++++.|.++...+|.++| ||+ +|+|+++|++|+.+++||+|++.+...|+.|.+|+.|+++.|++..... .+...+
T Consensus        47 D~~~~~G~~~~~~~p~v~G-hE~-~G~V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~  124 (197)
T d2fzwa1          47 DAYTLSGADPEGCFPVILG-HLG-AGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPD  124 (197)
T ss_dssp             HHHHHHTCCTTCCSSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTT
T ss_pred             cHHHHcCCcccccccccCC-cce-eeEEEeecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCC
Confidence            6777888887778999999 999 9999999999999999999999999999999999999999999865532 344566


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                      ...+...+|...++..+.|+|+||+.+++..++++|++++++++|++.+++.|++.++.....-+.+++|||+
T Consensus       125 ~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         125 GTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             SCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             ccceeccCCcceecccccccceeEEEechHHEEECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            5556667777777788889999999999999999999999999999999999999987444445678888874

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=9.3e-23  Score=168.64  Aligned_cols=171  Identities=16%  Similarity=0.148  Sum_probs=130.1

Q ss_pred             CCcccccccccchhhhhHHHHHhcCCCCC--CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHhcCCce
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKEAKVEKG--SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEK-GKAFGMTD  198 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~--~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~-~~~lga~~  198 (335)
                      +|+.+.| ++++..|||++|++..+++++  ++|||+|+ |++|++++|+||.+|+.+|+++++++++... .+++|+++
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            4556654 667899999999999999887  88999986 9999999999999999777777777766655 46899999


Q ss_pred             EeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC--c--c--ccc---hhHHHh
Q 019822          199 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD--A--M--VPL---NVIALA  269 (335)
Q Consensus       199 v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~--~--~--~~~---~~~~~~  269 (335)
                      ++|+++   +++.+.+++.++ +|+|+|||++|++ .++..+++++++ |+++.+|..++  .  +  .+.   ....+.
T Consensus        81 vi~~~~---~~~~~~~~~~~~-~GvDvv~D~vGg~-~~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~  154 (187)
T d1vj1a2          81 AVNYKT---GNVAEQLREACP-GGVDVYFDNVGGD-ISNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRK  154 (187)
T ss_dssp             EEETTS---SCHHHHHHHHCT-TCEEEEEESSCHH-HHHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHH
T ss_pred             Eeeccc---hhHHHHHHHHhc-cCceEEEecCCch-hHHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHH
Confidence            999998   889999999886 5999999999986 789999999998 99999987543  1  1  111   122344


Q ss_pred             hcCcEEEEeeccCCCC--cCcHHHHHHHHhCCC
Q 019822          270 CGGRTLKGTTFGGIKT--KSDLPTLLDKCKNKE  300 (335)
Q Consensus       270 ~~~~~~~g~~~~~~~~--~~~~~~~~~~i~~~~  300 (335)
                      .+++++.++.+.++..  .+.++++.+++++|+
T Consensus       155 ~k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         155 ERNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             HTTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             hcceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            6889999876654321  233566677777764

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.88  E-value=3.8e-23  Score=173.06  Aligned_cols=148  Identities=30%  Similarity=0.473  Sum_probs=123.7

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-----c
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-----N   79 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-----~   79 (335)
                      .|++.++|.++. .+|.++| ||+ +|+|+++|++|+++++||+|++.+...|+.|++|+.|.++.|.+.....     .
T Consensus        48 sD~~~~~G~~~~-~~P~v~G-HE~-~G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~  124 (202)
T d1e3ia1          48 TDINATDPKKKA-LFPVVLG-HEC-AGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQ  124 (202)
T ss_dssp             HHHHTTCTTSCC-CSSBCCC-CEE-EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSS
T ss_pred             cccceeeeeccc-ccccccc-ccc-ceEEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccce
Confidence            366777887764 5799999 999 9999999999999999999999999999999999999999999876632     1


Q ss_pred             ccccCCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc
Q 019822           80 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG  158 (335)
Q Consensus        80 g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G  158 (335)
                      +....+..+.+.+|...++..+.|+|+||+.+++..++++|++++++.++++.+++.+++.++. .  +++|++|.|+.
T Consensus       125 ~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~-~--~k~G~~V~vi~  200 (202)
T d1e3ia1         125 ELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAID-L--MKEGKSIRTIL  200 (202)
T ss_dssp             CSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHH-H--HHTTCCSEEEE
T ss_pred             ecccccccccccCceeeecccccCCceEEEEEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHH-h--CCCCCEEEEEE
Confidence            1223445566677888888888899999999999999999999999988888888888887762 2  46788887763

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=1.5e-23  Score=173.44  Aligned_cols=136  Identities=16%  Similarity=0.211  Sum_probs=110.6

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCC-CcccCCCEEEeccc-CCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEV-KEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v-~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.+.|.++...+|.|+| ||+ +|+|+++|+++ +.+++||||.+.+. ..|+.|.+|+.|.++.|.+......+...
T Consensus        49 Dl~~~~g~~~~~~~P~i~G-HE~-~G~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~  126 (192)
T d1piwa1          49 DIHCAAGHWGNMKMPLVVG-HEI-VGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYE  126 (192)
T ss_dssp             HHHHHTTTTSCCCSSEECC-CCE-EEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCT
T ss_pred             hHHHHcCCCCCCCCCcCcc-ccc-ccchhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccc
Confidence            5667788888888999999 999 99999999998 56999999987764 57999999999999999987553211111


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                      +|             ....|+|+||+.+++..++++|++++++.|+.+.+.+.|||+++ ++++++++++|||.
T Consensus       127 ~G-------------~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         127 DG-------------YVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             TS-------------CBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             cc-------------cccccceeeEEEeehHHeEECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            11             11124999999999999999999999988776665578999977 67999999999874

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.5e-23  Score=170.10  Aligned_cols=119  Identities=18%  Similarity=0.151  Sum_probs=102.8

Q ss_pred             CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccc-cCCCccccccCce
Q 019822           17 RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLM-LDSTSRMSVRGQK   95 (335)
Q Consensus        17 ~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~-~~g~~~~~~~~~~   95 (335)
                      ..+|.++| ||+ +|+|+++|+++++|++||+|++.+...|+.|++|+.|.++.|.+..+.  |.. .+|          
T Consensus        61 ~~~p~i~G-hE~-~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~--g~~~~~G----------  126 (185)
T d1pl8a1          61 VKKPMVLG-HEA-SGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC--ATPPDDG----------  126 (185)
T ss_dssp             CSSCEECC-CEE-EEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET--TBTTBCC----------
T ss_pred             CCCCeeee-eee-eeeEEEeccceeeecccccceecceeccccchhhccchhchhccceee--ecccccc----------
Confidence            46789999 999 999999999999999999999999999999999999999999987763  433 333          


Q ss_pred             eecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCH
Q 019822           96 LYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGT  161 (335)
Q Consensus        96 ~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~  161 (335)
                              +|+||+.+++++++++|+++++++++++  ++.++++++ ++.+.+++++||| |+|+
T Consensus       127 --------~~aey~~~~~~~~~~lP~~~~~~~aa~~--pl~~a~~a~-~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         127 --------NLCRFYKHNAAFCYKLPDNVKPLVTHRF--PLEKALEAF-ETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             --------SCBSEEEEEGGGEEECCTTCGGGEEEEE--EGGGHHHHH-HHHHTTCCSEEEE-ECCT
T ss_pred             --------cceEEEEEchHHEEECCCCCCHHHHHHH--HHHHHHHHH-HHhCCCCCCEEEE-EeCC
Confidence                    8999999999999999999999998765  455677764 6788899999998 5543

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.87  E-value=1.5e-25  Score=186.98  Aligned_cols=152  Identities=16%  Similarity=0.181  Sum_probs=115.0

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDS   85 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g   85 (335)
                      |++.++|.++. .+|.++| ||+ +|+|+++|++|++|++||||++.+..+|+.|++|++|+++.|.+......+... +
T Consensus        48 Dl~~~~G~~~~-~~P~v~G-HE~-~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~-g  123 (201)
T d1kola1          48 DQHMVRGRTTA-QVGLVLG-HEI-TGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAY-G  123 (201)
T ss_dssp             HHHHHTTCSCC-CTTCBCC-CCE-EEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEB-T
T ss_pred             hhhhhcCCccc-ccceecc-cee-eeeeeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccc-c
Confidence            66777888774 6899999 999 999999999999999999999999999999999999999999775432211110 0


Q ss_pred             CccccccCceeecccccccceeeEEecc--cceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHH
Q 019822           86 TSRMSVRGQKLYHIFSCSTWSEYMVIDA--NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVG  163 (335)
Q Consensus        86 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~--~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG  163 (335)
                      ....       .+.  .|+|+||+++|.  ..+++||++.++.+++++..++.++++++ .....+.+    ++|+|++|
T Consensus       124 ~~~~-------~~~--~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~G~vG  189 (201)
T d1kola1         124 YVDM-------GDW--TGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDAGVPK  189 (201)
T ss_dssp             CTTS-------CCB--CCCSBSEEEESSHHHHCEECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHHTCSC
T ss_pred             ccCC-------Ccc--ccccccEEEeehHHCeEEECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEeeCHHH
Confidence            0000       001  248999999975  47999999877667666766777787765 33333333    24889999


Q ss_pred             HHHHHHHHHcCC
Q 019822          164 LGAVDGARMHGA  175 (335)
Q Consensus       164 ~~ai~la~~~G~  175 (335)
                      ++++|+||++|+
T Consensus       190 ~~~i~~ak~~GA  201 (201)
T d1kola1         190 KFVIDPHKTFSA  201 (201)
T ss_dssp             EEEECTTCSSCC
T ss_pred             HHHHHHHHHcCC
Confidence            999999999885

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=1.2e-22  Score=166.26  Aligned_cols=128  Identities=20%  Similarity=0.244  Sum_probs=111.7

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.++|.++. ..+|.++| ||+ +|+|+++|+++++|++||||++.+ ...|+.|.+|+.|.++.|.+...  +|+..
T Consensus        46 D~~~~~G~~~~~~~~P~i~G-hE~-~G~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~--~G~~~  121 (175)
T d1llua1          46 DLHAAEGDWPVKPPLPFIPG-HEG-VGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN--TGYSV  121 (175)
T ss_dssp             HHHHHHTCSSSCCCSSBCCC-SCE-EEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEE--BTTTB
T ss_pred             chhhhccCccccccCCcCCC-Ccc-eEEEEEeCCCccccccCCEEEeccccccCCccccccCCcccccccccc--ccccc
Confidence            56677888875 57899999 999 999999999999999999999776 45799999999999999998877  47777


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                      +|                  +|+||+.++++.++++|++++++.++++.+++.|+++.+ + ++..+|++|||+
T Consensus       122 ~g------------------g~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~~-~-~g~~~G~~VLVl  175 (175)
T d1llua1         122 NG------------------GYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM-R-AGQIEGRIVLEM  175 (175)
T ss_dssp             CC------------------SSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHHH-H-TTCCSSEEEEEC
T ss_pred             cc------------------ccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHHH-H-hCCCCCCEEEeC
Confidence            76                  899999999999999999999998888888888888765 3 445579999985

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.86  E-value=3.3e-22  Score=161.56  Aligned_cols=138  Identities=22%  Similarity=0.182  Sum_probs=116.2

Q ss_pred             chhhhhHH---HHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchh
Q 019822          134 GFTTGYGA---AWKEAKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKS  209 (335)
Q Consensus       134 ~~~ta~~~---l~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~  209 (335)
                      +..|||.+   |.+.....++++|||+|+ |+||.+++||||.+|+ +|++++++++|.++++++|+++++++++     
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~-----   77 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED-----   77 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH-----
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc-----
Confidence            45677654   444455667889999986 9999999999999999 9999999999999999999999987653     


Q ss_pred             HHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEee
Q 019822          210 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGTT  279 (335)
Q Consensus       210 ~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~  279 (335)
                      +.....+.+.++++|+|||++|++ .+..++++++++ |+++.+|...+...+++...++.|++++.|..
T Consensus        78 ~~~~~~~~~~~~gvd~vid~vgg~-~~~~~~~~l~~~-G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~  145 (167)
T d1tt7a2          78 VYDGTLKALSKQQWQGAVDPVGGK-QLASLLSKIQYG-GSVAVSGLTGGGEVPATVYPFILRGVSLLGID  145 (167)
T ss_dssp             HCSSCCCSSCCCCEEEEEESCCTH-HHHHHHTTEEEE-EEEEECCCSSCSCEEECSHHHHTSCCEEEECC
T ss_pred             hhchhhhcccCCCceEEEecCcHH-HHHHHHHHhccC-ceEEEeeccCCCcccCCHHHHHHCCcEEEEEe
Confidence            222333445666999999999998 889999999998 99999999887777888888999999999975

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.5e-22  Score=165.14  Aligned_cols=149  Identities=19%  Similarity=0.217  Sum_probs=125.2

Q ss_pred             CCcccccccccchhhhhHHHHH--hcC-CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce
Q 019822          123 IDPSDASFLSCGFTTGYGAAWK--EAK-VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  198 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~--~~~-~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~  198 (335)
                      +|+.+||+++++..|||++++.  ..+ ..++++|||+|+ |++|.+++|+||.+|+ +|+++++++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            5788999999999999987643  233 345569999976 9999999999999999 9999999999999999999999


Q ss_pred             EeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCCccccchhHHHhhcCcEEEEe
Q 019822          199 FINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLNVIALACGGRTLKGT  278 (335)
Q Consensus       199 v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~  278 (335)
                      ++++++   .++.+   .+ .....|.++|+++++ .+...+++++++ |+++.+|...+...+++...++.|++++.|+
T Consensus        80 vi~~~~---~~~~~---~l-~~~~~~~vvD~Vgg~-~~~~~l~~l~~~-Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDE---FAESR---PL-EKQVWAGAIDTVGDK-VLAKVLAQMNYG-GCVAACGLAGGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGG---SSSCC---SS-CCCCEEEEEESSCHH-HHHHHHHTEEEE-EEEEECCCTTCSCCCCCSHHHHHHCCEEEEC
T ss_pred             cccccc---HHHHH---HH-HhhcCCeeEEEcchH-HHHHHHHHhccc-cceEeecccCCccccccHHHHHHCCCeEEEE
Confidence            999876   44322   22 334679999999987 789999999997 9999999887766778888888899999997


Q ss_pred             ecc
Q 019822          279 TFG  281 (335)
Q Consensus       279 ~~~  281 (335)
                      +..
T Consensus       151 ~~~  153 (177)
T d1o89a2         151 DSV  153 (177)
T ss_dssp             CSS
T ss_pred             ecc
Confidence            643

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.84  E-value=2.1e-22  Score=167.63  Aligned_cols=146  Identities=30%  Similarity=0.473  Sum_probs=119.3

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~   84 (335)
                      |++++.|.++. .+|.++| ||+ +|+|+++|+++.++++||+|++.+...|+.|.+|+.|.+++|++..... .+...+
T Consensus        49 Dlh~~~G~~~~-~~P~i~G-HE~-~G~Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~  125 (198)
T d1p0fa1          49 DSSVLKEIIPS-KFPVILG-HEA-VGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMAD  125 (198)
T ss_dssp             HHHHHTTSSCC-CSSBCCC-CCE-EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTT
T ss_pred             cceeeeecccc-ccccccc-eee-eeeeeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCC
Confidence            66777887764 6899999 999 9999999999999999999999999999999999999999999876632 345566


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGL  164 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~  164 (335)
                      +.+++..++...+...+.|+|+||+.+++..++++|++++++.++...+.+.+.          .+++.|||.|+|++|+
T Consensus       126 ~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~~~~~~~~~~~~~~~~v----------~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         126 MTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQI----------NKAFELLSSGQGVRSI  195 (198)
T ss_dssp             SCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTSCGGGGEEEEECGGGH----------HHHHHHTTTSSCSEEE
T ss_pred             CceeEeeCCeeccccCCCccceeeEEecHHHEEECCCCCCHHHHHHhhcchhhc----------CCCCEEEEECCCcceE
Confidence            667777888888877788899999999999999999999987766554444332          2233477778887764

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.84  E-value=9.3e-24  Score=172.44  Aligned_cols=130  Identities=13%  Similarity=0.085  Sum_probs=99.9

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~   84 (335)
                      |++.+++..+...+|.++| ||+ +|+|+++|+++++|++||||++.+..+|+.|++|+.|.++.|.+...+. +|...+
T Consensus        40 D~~~~~~~~~~~~~P~i~G-hE~-~G~V~~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~  117 (177)
T d1jqba1          40 DIHTVFEGALGDRKNMILG-HEA-VGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKD  117 (177)
T ss_dssp             HHHHHHHCTTCCCSSEECC-CCE-EEEEEEECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBC
T ss_pred             cccccccCCCCCCCCccCc-cee-eEEeeecccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCC
Confidence            4555555555567899999 999 9999999999999999999999999999999999999999998865431 233344


Q ss_pred             CCccccccCceeecccccccceeeEEecc--cceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcCCHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDA--NYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTV  162 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~--~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~v  162 (335)
                      |                  +|+||++||.  ..++++|+++++++++....   +++..+        ++.+||+|+|++
T Consensus       118 G------------------~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~---~~~~~~--------~~~vlv~g~gp~  168 (177)
T d1jqba1         118 G------------------VFGEYFHVNDADMNLAILPKDVDLSKLVTHVY---HGFDHI--------EEALLLMKDKPK  168 (177)
T ss_dssp             C------------------SSBSSEEESSHHHHCEECCTTSCGGGGEEEEE---ESGGGH--------HHHHHHHHHCCT
T ss_pred             h------------------hcCeeEEEEhhhCeEEECCCCcchHHHHHHHH---HHHHHh--------cCceEEECCCHH
Confidence            4                  8999999986  46899999999887765432   233322        233666777777


Q ss_pred             HHHH
Q 019822          163 GLGA  166 (335)
Q Consensus       163 G~~a  166 (335)
                      |+.+
T Consensus       169 gl~a  172 (177)
T d1jqba1         169 DLIK  172 (177)
T ss_dssp             TCSE
T ss_pred             Hhhe
Confidence            6543

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.84  E-value=1.1e-21  Score=160.72  Aligned_cols=131  Identities=18%  Similarity=0.252  Sum_probs=104.0

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCC-----cccCCCEEEecccCCCCCCcccccCCC-CCCcCcccccc
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVK-----EVKEGDIVIPTYIGECKECENCTSEMT-NLCLKYPIALN   79 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~-----~~~~Gd~V~~~~~~~~~~~~~c~~g~~-~~c~~~~~~~~   79 (335)
                      |+++++|.++...+|.++| ||+ +|+|+++|++|+     ++++||+|++.+..+|+.|++|+.|.+ +.|.+...  +
T Consensus        45 D~~~~~G~~~~~~~P~vlG-HE~-~G~V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~--~  120 (184)
T d1vj0a1          45 DVHMFRGEDPRVPLPIILG-HEG-AGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV--Y  120 (184)
T ss_dssp             HHHHHTTCCTTCCSSBCCC-CEE-EEEEEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE--T
T ss_pred             chhheeccCCccccccccc-eee-eeeeeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCcee--e
Confidence            6777889888778999999 999 999999999985     468999999999999999999999985 56877665  3


Q ss_pred             ccccCCCccccccCceeecccccccceeeEEec-ccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           80 GLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVID-ANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        80 g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                      |+...-        .+..+.  .|+|+||+.++ +..++++|+++++++      ++.+|++++ ++++++++++|||+
T Consensus       121 G~~~~~--------~~~~~~--~Gg~ae~~~v~~~~~v~~ip~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         121 GINRGC--------SEYPHL--RGCYSSHIVLDPETDVLKVSEKITHRL------PLKEANKAL-ELMESREALKVILY  182 (184)
T ss_dssp             TTTCCS--------SSTTCC--CSSSBSEEEECTTCCEEEECTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred             ccCCCC--------CCCCCc--ceeCcCcEEechhHcEEECCCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEe
Confidence            543211        000011  24999999995 689999999998653      355677766 77899999999996

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.83  E-value=2.7e-21  Score=161.14  Aligned_cols=146  Identities=27%  Similarity=0.425  Sum_probs=120.1

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccc-cccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIAL-NGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~-~g~~~~   84 (335)
                      |++.+.|.++. .+|.++| ||+ +|+|+++|++++++++||+|++.+...|+.|.+|+.|.++.|.+.+... .+...+
T Consensus        49 Dl~~~~G~~~~-~~P~i~G-HE~-~G~Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~  125 (198)
T d2jhfa1          49 DDHVVSGTLVT-PLPVIAG-HEA-AGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQD  125 (198)
T ss_dssp             HHHHHHTSSCC-CSSBCCC-CSE-EEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTT
T ss_pred             cceeecCCccc-ccceecc-cce-eEEEEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccC
Confidence            67778888775 5899999 999 9999999999999999999999999999999999999999999977642 345566


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                      +.+.+..+|...++..+.|+|+||+++|+..++++|++++++.++....++.+...   ....+.+|++|+|+
T Consensus       126 ~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~~~~e~l~~~~~~~~~v~~---g~~~l~~G~~VaVi  195 (198)
T d2jhfa1         126 GTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINE---GFDLLRSGESIRTI  195 (198)
T ss_dssp             SCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHH---HHHHHHTTCCSEEE
T ss_pred             ccccccccCceeccCCCCCcccCeEEeCHHHeEECCCCCCHHHHHHHHHHHHhhhh---CCceeeCCCEEEEE
Confidence            66777788888888888899999999999999999999988766654444433222   12336788888876

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.83  E-value=3.3e-21  Score=157.76  Aligned_cols=127  Identities=17%  Similarity=0.213  Sum_probs=101.9

Q ss_pred             EEeEeecCCC--------CCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccc
Q 019822            6 TLISFALKDS--------QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIA   77 (335)
Q Consensus         6 d~~~~~g~~~--------~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~   77 (335)
                      |++.++|.++        ...+|.|+| ||+ +|+|+++|+++++|++||+|++.+...|+.|++|+.|+++.|.+... 
T Consensus        41 D~~~~~G~~~~~~~~~~~~~~~P~v~G-hE~-~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~-  117 (177)
T d1jvba1          41 DVHMRQGRFGNLRIVEDLGVKLPVTLG-HEI-AGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW-  117 (177)
T ss_dssp             HHHHTTTEETTEETTTTTCCCSCEECC-CEE-EEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE-
T ss_pred             eeeeecCcccccccccccccCCCcccc-ceE-EEEEeeeccCccccccCceEeeeeccccccccccccccccccCCcce-
Confidence            5556666653        236899999 999 99999999999999999999999999999999999999999998876 


Q ss_pred             ccccccCCCccccccCceeecccccccceeeEEeccc-ceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEE
Q 019822           78 LNGLMLDSTSRMSVRGQKLYHIFSCSTWSEYMVIDAN-YVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAV  156 (335)
Q Consensus        78 ~~g~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI  156 (335)
                       +|+..+|                  +|+||+.+++. .++++|+..+.+.++....++.++++++ ..++. .|++|||
T Consensus       118 -~g~~~~G------------------~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         118 -LGINFDG------------------AYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             -BTTTBCC------------------SSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             -eeecccc------------------ccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence             4776666                  99999999765 5666665554444444456788888876 55665 5888887

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.81  E-value=1.5e-20  Score=153.02  Aligned_cols=128  Identities=23%  Similarity=0.316  Sum_probs=103.7

Q ss_pred             EEeEeecCCC-CCCccccccccccceEEEEEeCCCCCcccCCCEEEeccc-CCCCCCcccccCCCCCCcCcccccccccc
Q 019822            6 TLISFALKDS-QRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYI-GECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         6 d~~~~~g~~~-~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      |++.+++.+. ...+|.++| ||+ +|+|+++|++++.+++||+|++.+. ..|+.|..|..+.++.|.+...  .|...
T Consensus        41 D~~~~~~~~~~~~~~p~v~G-hE~-~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~  116 (171)
T d1rjwa1          41 DLHAAHGDWPVKPKLPLIPG-HEG-VGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN--AGYSV  116 (171)
T ss_dssp             HHHHHHTCSSSCCCSSBCCC-SCE-EEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEE--BTTTB
T ss_pred             ceeeeecccccccccccccC-CEE-EEEEEEecccccCceeeeEEeeccccccccccccccCCCccccccccc--cceec
Confidence            4444555443 357899999 999 9999999999999999999987764 4688899999999999998877  47766


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL  159 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~  159 (335)
                      +|                  +|+||+.+++++++++|++++++.|+ +. .+.++++++. ++.+ +|++|||+|.
T Consensus       117 ~G------------------~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~~~~~~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         117 DG------------------GYAEYCRAAADYVVKIPDNTIIEVQP-LE-KINEVFDRML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             CC------------------SSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred             cC------------------ccccceEecHHHEEECCCCCCHHHHH-HH-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence            66                  99999999999999999999987655 44 4566776653 3444 5999999984

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=9.7e-20  Score=148.67  Aligned_cols=125  Identities=20%  Similarity=0.296  Sum_probs=93.8

Q ss_pred             EEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecc-cCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTY-IGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.++|.++...+|.|+| ||+ +|+|+++|++|+++++||+|.+.+ ...|+.|++|+.|++++|.+....-.+....
T Consensus        41 Dl~~~~g~~~~~~~P~i~G-hE~-~G~V~~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~  118 (179)
T d1uufa1          41 DLHQVRSEWAGTVYPCVPG-HEI-VGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPD  118 (179)
T ss_dssp             HHHHHHCTTSCCCSSBCCC-CCE-EEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSS
T ss_pred             cceeeeeeecccccccccc-ccc-cccchhhccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCC
Confidence            6677888888778999999 999 999999999999999999997666 5699999999999999999865421111111


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCC
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKV  148 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~  148 (335)
                      .          ..+  ..|+|+||+.+|+++++++|+.....  +. ..++.++++++ .++.+
T Consensus       119 ~----------~~~--~~GgfaEy~~v~~~~~~~ip~~~~~~--~~-a~~l~~a~~a~-~~a~v  166 (179)
T d1uufa1         119 E----------PGH--TLGGYSQQIVVHERYVLRIRVADIEM--IR-ADQINEAYERM-LRGDV  166 (179)
T ss_dssp             T----------TSB--CCCSSBSEEEEEGGGCEECCCCCEEE--EC-GGGHHHHHHHH-HTTCS
T ss_pred             C----------Ccc--cccccceEEEechHHEEECCCCCcCh--hH-hchhHHHHHHH-HHhCc
Confidence            0          001  12489999999999999999654322  22 23667788776 34444

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=7.7e-19  Score=139.33  Aligned_cols=104  Identities=18%  Similarity=0.205  Sum_probs=91.0

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.++|.++. ..+|.++| ||+ +|+|+++|+++++|++||||+..+.                            .+
T Consensus        46 D~~~~~g~~~~~~~~p~i~G-~e~-~G~V~~vG~~v~~~~vGdrV~~~~~----------------------------~~   95 (150)
T d1yb5a1          46 ETYIRSGTYSRKPLLPYTPG-SDV-AGVIEAVGDNASAFKKGDRVFTSST----------------------------IS   95 (150)
T ss_dssp             HHHHHHTCSSCCCCSSBCCC-SCE-EEEEEEECTTCTTCCTTCEEEESCC----------------------------SS
T ss_pred             chhhhcCCcCccccccccCc-cce-eeeeEeecceeeccccCcccccccc----------------------------cc
Confidence            55666777765 57899999 999 9999999999999999999975321                            12


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                                        |+|+||+.++++.++++|+++++++||++++...|+|+++...+....|+++||+
T Consensus        96 ------------------G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          96 ------------------GGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             ------------------CSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             ------------------ccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence                              3899999999999999999999999999999999999999888899999999984

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=9.3e-18  Score=132.62  Aligned_cols=103  Identities=17%  Similarity=0.112  Sum_probs=85.1

Q ss_pred             EEEeEeecCCCCCCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            5 VTLISFALKDSQRLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         5 ~d~~~~~g~~~~~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      .|++.+.|.++...+|.++| ||+ +|+|+++|+++++|++||+|+...                            .. 
T Consensus        42 ~D~~~~~G~~~~~~~p~~~G-~e~-~G~V~~vG~~v~~~~vGdrV~~~~----------------------------~~-   90 (147)
T d1qora1          42 IDTYIRSGLYPPPSLPSGLG-TEA-AGIVSKVGSGVKHIKAGDRVVYAQ----------------------------SA-   90 (147)
T ss_dssp             HHHHHHHTSSCCSSSSBCCC-SCE-EEEEEEECTTCCSCCTTCEEEESC----------------------------CS-
T ss_pred             eeeeeecCCCCCCcceeeec-ccc-ccceeeeeeecccccccceeeeec----------------------------cc-
Confidence            36777889988888999999 999 999999999999999999996321                            11 


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccc--cccchhhhhHHHHHhcCCCCCCEEEE
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASF--LSCGFTTGYGAAWKEAKVEKGSSVAV  156 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~--l~~~~~ta~~~l~~~~~~~~~~~VlI  156 (335)
                                       .|+|+||+.++++.++++|++++++.+++  ++....++++++++ .++++|++|||
T Consensus        91 -----------------~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1          91 -----------------LGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             -----------------SCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             -----------------cccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence                             13899999999999999999998876544  45566677777754 67899999997

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.58  E-value=4.7e-16  Score=123.32  Aligned_cols=106  Identities=19%  Similarity=0.182  Sum_probs=85.0

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++.+.|.++. ..+|.++| ||+ +|+|++  ..+..|++||+|......                       .+..++
T Consensus        46 D~~~~~g~~~~~~~~p~v~g-~e~-~G~v~~--~~~~~~~~g~~v~~~~~~-----------------------~~~~~~   98 (152)
T d1xa0a1          46 DGLASIPDGKIVKTYPFVPG-IDL-AGVVVS--SQHPRFREGDEVIATGYE-----------------------IGVTHF   98 (152)
T ss_dssp             HHHHTSGGGSSCCSSSBCCC-SEE-EEEEEE--CCSSSCCTTCEEEEESTT-----------------------BTTTBC
T ss_pred             HHHHHhhcccccccccceee-eee-eeeeec--cCCCccccCCEEEEecCc-----------------------cccccC
Confidence            45566777765 57899999 999 999999  456789999999754321                       123333


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEc
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLG  158 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G  158 (335)
                      |                  +|+||+.+|++.++++|++++. +||+++++..|+|.++..+..++ |++|||+|
T Consensus        99 G------------------~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          99 G------------------GYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             C------------------SSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             C------------------CcceeeeehhhccccCCCCCCH-HHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            3                  9999999999999999999985 68888888899998888888875 99999975

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.53  E-value=8.4e-16  Score=118.34  Aligned_cols=91  Identities=13%  Similarity=0.047  Sum_probs=76.5

Q ss_pred             EEEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            5 VTLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         5 ~d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      .|++.++|.++. ..+|.++| ||+ +|+|           +||+|+.                             +..
T Consensus        40 ~D~~~~~G~~~~~~~~P~v~G-~E~-~G~V-----------vGd~V~~-----------------------------~~~   77 (131)
T d1iz0a1          40 ADHLMRLGAYLTRLHPPFIPG-MEV-VGVV-----------EGRRYAA-----------------------------LVP   77 (131)
T ss_dssp             HHHHHHHTCSSSCCCSSBCCC-CEE-EEEE-----------TTEEEEE-----------------------------ECS
T ss_pred             cccccccccccccccceeEee-eee-EEee-----------ccceEEE-----------------------------Eec
Confidence            366677888876 57999999 999 9999           3999953                             333


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEE
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVL  157 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~  157 (335)
                      +|                  +|+||+.++++.++++|+++++++||++++++.|||++|++++  ..+++||++
T Consensus        78 ~G------------------~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1          78 QG------------------GLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             SC------------------CSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             cC------------------ccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence            33                  8999999999999999999999999999999999999987665  458888863

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.46  E-value=1.7e-14  Score=99.24  Aligned_cols=73  Identities=19%  Similarity=0.189  Sum_probs=65.5

Q ss_pred             CCcccccccccchhhhhHHHHHh---cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822          123 IDPSDASFLSCGFTTGYGAAWKE---AKVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  196 (335)
Q Consensus       123 ~~~~~aa~l~~~~~ta~~~l~~~---~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga  196 (335)
                      +|+++|+.++++..|||.+++..   ....++++|||+|+ |++|.+++|+++.+|+ +|+++++++++.++++++||
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            57889999999999999887543   45688999999986 9999999999999999 99999999999999999985

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.44  E-value=4.5e-14  Score=110.70  Aligned_cols=91  Identities=14%  Similarity=0.105  Sum_probs=73.6

Q ss_pred             EEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccC
Q 019822            6 TLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLD   84 (335)
Q Consensus         6 d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~   84 (335)
                      |++...|.++. ..+|.++| +|+ +|+|+++|.+  .+++||+|++....                       .|...+
T Consensus        43 D~~~~~G~~~~~~~~p~v~G-~e~-~G~V~~~~~~--~~~~g~~v~~~~~~-----------------------~g~~~~   95 (146)
T d1o89a1          43 DALAITGKGKIIRNFPMIPG-IDF-AGTVRTSEDP--RFHAGQEVLLTGWG-----------------------VGENHW   95 (146)
T ss_dssp             HHHHHHTCSSCCCSSSBCCC-SEE-EEEEEEECST--TCCTTCEEEEECTT-----------------------BTTTBC
T ss_pred             eeeEEEeecccccccceecc-ccc-cccceeeccC--CccceeeEEeeccc-----------------------ceecCC
Confidence            45556787765 57899999 999 9999998774  69999999764321                       233344


Q ss_pred             CCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHH
Q 019822           85 STSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGA  141 (335)
Q Consensus        85 g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  141 (335)
                      |                  +|+||+.+|++.++++|+++|+++||+++++..||+.+
T Consensus        96 G------------------~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~  134 (146)
T d1o89a1          96 G------------------GLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAII  134 (146)
T ss_dssp             C------------------SSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHH
T ss_pred             C------------------cceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            4                  99999999999999999999999999999888887543

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.42  E-value=9.8e-16  Score=122.78  Aligned_cols=109  Identities=16%  Similarity=0.124  Sum_probs=85.2

Q ss_pred             EEEeEeecCCCC-CCccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCcccccccccc
Q 019822            5 VTLISFALKDSQ-RLFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLML   83 (335)
Q Consensus         5 ~d~~~~~g~~~~-~~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~   83 (335)
                      .|++.+.|.++. +..|.++| ||+ +|+|++  +.+..+++||+|+.....                       .|...
T Consensus        45 ~D~~~~~g~~~~~~~~~~~~g-~e~-~G~v~~--~~~~~~~~g~~v~~~~~~-----------------------~g~~~   97 (162)
T d1tt7a1          45 KDGLAGKAGGNIVREYPLILG-IDA-AGTVVS--SNDPRFAEGDEVIATSYE-----------------------LGVSR   97 (162)
T ss_dssp             HHHHHTSTTCTTCSSCSEECC-SEE-EEEEEE--CSSTTCCTTCEEEEESTT-----------------------BTTTB
T ss_pred             hhhheeeecccccccceeeee-eec-cccccc--ccccccccceeeEeeecc-----------------------ceecc
Confidence            366677788775 46789999 999 999998  455789999999754321                       23334


Q ss_pred             CCCccccccCceeecccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHHhcCCCCCCEEEEEcC
Q 019822           84 DSTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWKEAKVEKGSSVAVLGL  159 (335)
Q Consensus        84 ~g~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~VlI~G~  159 (335)
                      +|                  +|+||+.+|++.++++|+++++++||++++..+|||.++.. .+...+++|||.|+
T Consensus        98 ~G------------------~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli~ga  154 (162)
T d1tt7a1          98 DG------------------GLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE-ETPGALKDILQNRI  154 (162)
T ss_dssp             CC------------------SSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST-THHHHHHHTTTTCC
T ss_pred             cc------------------ccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECC
Confidence            44                  99999999999999999999999999999999999986532 33444567777765

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.30  E-value=2.5e-15  Score=121.96  Aligned_cols=101  Identities=14%  Similarity=0.060  Sum_probs=81.8

Q ss_pred             CccccccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceee
Q 019822           18 LFILVFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLY   97 (335)
Q Consensus        18 ~~p~v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~   97 (335)
                      ..|.++| ||+ +|+|++.|.++..++.||+|...+.                            .              
T Consensus        71 ~~~~v~G-~e~-~g~V~~~~~~~~~~~~g~~v~~~~~----------------------------~--------------  106 (175)
T d1gu7a1          71 EPAAPCG-NEG-LFEVIKVGSNVSSLEAGDWVIPSHV----------------------------N--------------  106 (175)
T ss_dssp             SCBEECC-SCC-EEEEEEECTTCCSCCTTCEEEESSS----------------------------C--------------
T ss_pred             CCCcccc-ccc-ccccccccccccccccccceecccc----------------------------c--------------
Confidence            5788999 999 9999999999999999999964321                            1              


Q ss_pred             cccccccceeeEEecccceEEcCCCCCcccccccccchhhhhHHHHH-hcCCCCCCEEEEEc-C-CHHHHHHHH
Q 019822           98 HIFSCSTWSEYMVIDANYVVKVDPSIDPSDASFLSCGFTTGYGAAWK-EAKVEKGSSVAVLG-L-GTVGLGAVD  168 (335)
Q Consensus        98 ~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~~~~~VlI~G-~-g~vG~~ai~  168 (335)
                          .|+|+||+.+|++.++++|++++.+.++  .+...|||+++.. ..+++++++|||+| + |++|++++|
T Consensus       107 ----~g~~aey~~v~~~~~~~iP~~~~~~~a~--~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         107 ----FGTWRTHALGNDDDFIKLPNPAQSKANG--KPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             ----CCCSBSEEEEEGGGEEEECCHHHHHHTT--CSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             ----cccccceeeehhhhccCCCccchhhhhc--cchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence                1389999999999999999987644443  4567788887653 35789999999997 4 679988776

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.27  E-value=1.1e-06  Score=67.68  Aligned_cols=79  Identities=14%  Similarity=0.147  Sum_probs=56.4

Q ss_pred             cccccccceEEEEEeCCCCCcccCCCEEEecccCCCCCCcccccCCCCCCcCccccccccccCCCccccccCceeecccc
Q 019822           22 VFSGTKVSGKVVESAGDEVKEVKEGDIVIPTYIGECKECENCTSEMTNLCLKYPIALNGLMLDSTSRMSVRGQKLYHIFS  101 (335)
Q Consensus        22 v~G~~e~~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~g~~~~c~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~  101 (335)
                      ++. -+. +|+|++  ++++.|++||+|+..                                                 
T Consensus        62 ~~~-g~~-vg~Vv~--S~~~~f~~GD~V~g~-------------------------------------------------   88 (147)
T d1v3va1          62 VMM-GQQ-VARVVE--SKNSAFPAGSIVLAQ-------------------------------------------------   88 (147)
T ss_dssp             BCC-CCE-EEEEEE--ESCTTSCTTCEEEEC-------------------------------------------------
T ss_pred             ccc-cce-EEEEEE--eCCCcccCCCEEEEc-------------------------------------------------
Confidence            344 467 899988  667889999999632                                                 


Q ss_pred             cccceeeEEecccceEEcCCCCCcc-----cccccccchhh-hhHHHHHhcCCCCCCEEEE
Q 019822          102 CSTWSEYMVIDANYVVKVDPSIDPS-----DASFLSCGFTT-GYGAAWKEAKVEKGSSVAV  156 (335)
Q Consensus       102 ~g~~~~~~~v~~~~~~~lp~~~~~~-----~aa~l~~~~~t-a~~~l~~~~~~~~~~~VlI  156 (335)
                       ++|+||..++++.+.++|+.++..     ..+++.....| ||..++..  .+.|++||+
T Consensus        89 -~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~~--~k~Getvv~  146 (147)
T d1v3va1          89 -SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVVT  146 (147)
T ss_dssp             -CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHTT--CCSSEEEEE
T ss_pred             -cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhhCC--CCCCCEEEe
Confidence             279999999999999998765433     34445555555 55455443  456888886

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.08  E-value=9.3e-06  Score=63.00  Aligned_cols=98  Identities=21%  Similarity=0.232  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~--~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      +..+|+|+|+|.+|+.|++.|+.+|+ +|.++|.+.++++.++.....  .....++   ..+.+.++      ..|+||
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~---~~l~~~~~------~aDivI  100 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS---AEIETAVA------EADLLI  100 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH---HHHHHHHH------TCSEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhh---hhHHHhhc------cCcEEE
Confidence            56899999999999999999999999 999999999999998765422  1222222   33333333      589999


Q ss_pred             EcCCC-----hH-HHHHHHHhhccCCeEEEEEccCCC
Q 019822          228 ECTGV-----PS-LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       228 d~~g~-----~~-~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      .++=-     +. .-++.++.++++ ..+|++....+
T Consensus       101 ~aalipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidqG  136 (168)
T d1pjca1         101 GAVLVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQG  136 (168)
T ss_dssp             ECCCCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTC
T ss_pred             EeeecCCcccCeeecHHHHhhcCCC-cEEEEeecCCC
Confidence            87632     11 236888999997 99999987665

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.07  E-value=1e-05  Score=63.66  Aligned_cols=105  Identities=24%  Similarity=0.269  Sum_probs=75.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCC-CC------------C----CchhHHH
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINP-DD------------E----PNKSISE  212 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~-~~------------~----~~~~~~~  212 (335)
                      +..+|+|+|+|.+|+.|+..|+.+|+ .|.++|.+.++++.+++++...+.-. ..            +    ......+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            56799999999999999999999999 99999999999999999986544210 00            0    0001122


Q ss_pred             HHHhhhCCCCccEEEEcCC---C--hH-HHHHHHHhhccCCeEEEEEccCCC
Q 019822          213 LVKGITHGMGVDYCFECTG---V--PS-LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       213 ~i~~~~~g~g~d~vid~~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      .+.+...  ..|+||-++=   .  |. .-+...+.++++ +.+|++....+
T Consensus       107 ~l~~~l~--~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidqG  155 (183)
T d1l7da1         107 AVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAG  155 (183)
T ss_dssp             HHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGT
T ss_pred             HHHHHHH--hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecCC
Confidence            3333222  5899998662   2  11 236888999997 99999986655

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.84  E-value=4.7e-05  Score=59.57  Aligned_cols=74  Identities=19%  Similarity=0.179  Sum_probs=57.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      +.+..+..++++|||+|+|+.+.+++..++..|++++.++.|+.++.+.+. .++... ++...               .
T Consensus         8 ~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~---------------~   71 (167)
T d1npya1           8 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE---------------N   71 (167)
T ss_dssp             HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT---------------T
T ss_pred             HHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc---------------c
Confidence            346667778899999999999999999999999889999999999877764 455433 22221               1


Q ss_pred             CCccEEEEcCC
Q 019822          221 MGVDYCFECTG  231 (335)
Q Consensus       221 ~g~d~vid~~g  231 (335)
                      ..+|++++|++
T Consensus        72 ~~~DliINaTp   82 (167)
T d1npya1          72 QQADILVNVTS   82 (167)
T ss_dssp             CCCSEEEECSS
T ss_pred             cchhhheeccc
Confidence            26899999876

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.84  E-value=7.2e-05  Score=57.93  Aligned_cols=79  Identities=15%  Similarity=0.219  Sum_probs=60.4

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHhcCCceEeCCCCCCchhHHHHHHhhhCCC
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KGKAFGMTDFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .+..+--.+.+|||+|+|.+|.+.++.+...|+++++++.|+.++.+ +++++|.. +.+..+     +.+.+.      
T Consensus        16 ~~~~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~~-----~~~~l~------   83 (159)
T d1gpja2          16 ERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFDE-----LVDHLA------   83 (159)
T ss_dssp             HHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGGG-----HHHHHH------
T ss_pred             HHHhCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccchh-----HHHHhc------
Confidence            34455568899999999999999999999999988999999987765 55778753 333332     444443      


Q ss_pred             CccEEEEcCCCh
Q 019822          222 GVDYCFECTGVP  233 (335)
Q Consensus       222 g~d~vid~~g~~  233 (335)
                      .+|+||.|++.+
T Consensus        84 ~~Divi~atss~   95 (159)
T d1gpja2          84 RSDVVVSATAAP   95 (159)
T ss_dssp             TCSEEEECCSSS
T ss_pred             cCCEEEEecCCC
Confidence            589999999864

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.75  E-value=8.4e-05  Score=62.63  Aligned_cols=105  Identities=17%  Similarity=0.166  Sum_probs=74.4

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCc-eEeCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMT-DFINPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~  215 (335)
                      +...++++||++||=.|+|+ |.+++.+|+..|. .+|++++.+++..+.++    ++|.. .+....    .+    +.
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~----~d----~~  165 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV----RD----IS  165 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC----CC----GG
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEe----cc----cc
Confidence            56789999999999999875 8888899998763 39999999999887764    35532 221111    11    12


Q ss_pred             hhhCCCCccEEEEcCCC-hHHHHHHHHhhccCCeEEEEEccC
Q 019822          216 GITHGMGVDYCFECTGV-PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~-~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +......+|.|+--... ...++.+.+.|+++ |+++.+...
T Consensus       166 ~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~P~  206 (266)
T d1o54a_         166 EGFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCPT  206 (266)
T ss_dssp             GCCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEESS
T ss_pred             ccccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEeCc
Confidence            22334478888744444 46789999999998 999887543

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.70  E-value=2.2e-05  Score=64.06  Aligned_cols=111  Identities=20%  Similarity=0.254  Sum_probs=76.1

Q ss_pred             cccchhhhhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceEeCCCCCC
Q 019822          131 LSCGFTTGYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDFINPDDEP  206 (335)
Q Consensus       131 l~~~~~ta~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~  206 (335)
                      +..+...|.  +.+...++++++||.+|+|+ |..++.+++..|. +|++++.+++-.+.+    +++|.+.+.-...  
T Consensus        61 is~P~~~a~--ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g--  134 (215)
T d1jg1a_          61 VSAPHMVAI--MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG--  134 (215)
T ss_dssp             ECCHHHHHH--HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--
T ss_pred             hhhhhhHHH--HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC--
Confidence            343444443  45778999999999999874 8899999998886 899999987655444    5567554332221  


Q ss_pred             chhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          207 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       207 ~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                        +.   ...+.....||.|+-+.+.+..-..+++.|+++ |+++..
T Consensus       135 --d~---~~g~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         135 --DG---SKGFPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             --CG---GGCCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             --cc---ccCCcccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence              11   111223347999987665554557889999998 999875

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.55  E-value=1.4e-05  Score=65.32  Aligned_cols=103  Identities=24%  Similarity=0.265  Sum_probs=71.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKG  216 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~  216 (335)
                      +.+.++++++++||-+|+|+ |..++.+++..|. .+|++++.+++..+.+++    .+...+.....    +.   ...
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~----d~---~~~  138 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG----DG---YYG  138 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES----CG---GGC
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC----ch---HHc
Confidence            45778999999999999876 8889999998763 389999999988777643    34332211111    00   011


Q ss_pred             hhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          217 ITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      +.....||+|+.+.+-....+.+++.|+++ |+++..
T Consensus       139 ~~~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~p  174 (213)
T d1dl5a1         139 VPEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  174 (213)
T ss_dssp             CGGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred             cccccchhhhhhhccHHHhHHHHHHhcCCC-cEEEEE
Confidence            122236999998766554557788999998 999874

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.54  E-value=0.00053  Score=54.50  Aligned_cols=77  Identities=17%  Similarity=0.205  Sum_probs=56.4

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-c----C-CceEeCCCCCCchhHHHHHHhhhC
Q 019822          147 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-F----G-MTDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       147 ~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-l----g-a~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      ..-+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ +    . .....|..+   .   +.+++..+
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~---~---~~~~~~~~   91 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD---D---ASRAEAVK   91 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS---H---HHHHHHTT
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc---H---HHHHHHhc
Confidence            4568999999987 9999999999999999 99999999988776532 2    2 122344433   2   23444443


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                        ++|++|++.|.
T Consensus        92 --~iDilin~Ag~  102 (191)
T d1luaa1          92 --GAHFVFTAGAI  102 (191)
T ss_dssp             --TCSEEEECCCT
T ss_pred             --CcCeeeecCcc
Confidence              69999999774

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=0.00026  Score=58.79  Aligned_cols=78  Identities=21%  Similarity=0.298  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce--EeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD--FINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~--v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++...  ..|-.+   .+..+.+-+.. | ++|
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~-g-~iD   78 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD---WEATERALGSV-G-PVD   78 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHTTC-C-CCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC---HHHHHHHHHHh-C-Cce
Confidence            37899999987 9999999999999999 999999999988765 4454322  334443   33333333333 3 699


Q ss_pred             EEEEcCCC
Q 019822          225 YCFECTGV  232 (335)
Q Consensus       225 ~vid~~g~  232 (335)
                      +++++.|.
T Consensus        79 ilVnnAg~   86 (244)
T d1pr9a_          79 LLVNNAAV   86 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99998874

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.50  E-value=0.00048  Score=57.39  Aligned_cols=108  Identities=18%  Similarity=0.175  Sum_probs=71.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceE-eCCCCCCchhHHHHHHhhh--CCCCc
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVKGIT--HGMGV  223 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~--~g~g~  223 (335)
                      -+++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.... +..+-.+..+..+.+++..  -| ++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g-~i   81 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLG-TL   81 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHC-SC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhC-CC
Confidence            36789999986 9999999999999999 999999999887765 56664332 2211111123333333221  13 68


Q ss_pred             cEEEEcCCChH-------------------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          224 DYCFECTGVPS-------------------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       224 d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      |+++++.|...                         ..+.+++.+...+|+++.++....
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            99999887410                         234556666543499999986554

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.46  E-value=0.00037  Score=57.70  Aligned_cols=77  Identities=19%  Similarity=0.226  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce--EeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD--FINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~--v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...  ..|-.+   .+..+.+-+.. | ++|+
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~-g-~iDi   77 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGD---WDATEKALGGI-G-PVDL   77 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC---HHHHHHHHTTC-C-CCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCC---HHHHHHHHHHc-C-CCeE
Confidence            6899999987 9999999999999999 999999999887765 4454222  234333   33333333322 3 6999


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      ++++.|.
T Consensus        78 lVnnAg~   84 (242)
T d1cyda_          78 LVNNAAL   84 (242)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9998874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.0005  Score=53.58  Aligned_cols=77  Identities=13%  Similarity=0.170  Sum_probs=54.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcC---CceEeCCCCCCchhHHHHHHhh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFG---MTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lg---a~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      |.+..-..++++|||+|+|+.+.+++..+..+|. +|+.+.|+.++.+.+. .+.   ....+...+            .
T Consensus         9 l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~------------~   75 (170)
T d1nyta1           9 LERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMDE------------L   75 (170)
T ss_dssp             HHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSGG------------G
T ss_pred             HHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccccc------------c
Confidence            4333334678999999999999999999999999 8999999998877653 332   222222211            1


Q ss_pred             hCCCCccEEEEcCCC
Q 019822          218 THGMGVDYCFECTGV  232 (335)
Q Consensus       218 ~~g~g~d~vid~~g~  232 (335)
                       ....+|++|+|++.
T Consensus        76 -~~~~~dliIN~Tp~   89 (170)
T d1nyta1          76 -EGHEFDLIINATSS   89 (170)
T ss_dssp             -TTCCCSEEEECCSC
T ss_pred             -cccccceeeccccc
Confidence             12378999999864

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.41  E-value=0.0017  Score=53.97  Aligned_cols=95  Identities=23%  Similarity=0.343  Sum_probs=64.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eEeCCCCCCchhHHHHHHhhhCCCC
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      .+++++||=+|+|+ |.+++.+++ .|+ +|++++.+++..+.+++    .+.. .++.      .+...    ......
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~------~d~~~----~~~~~~  184 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE------GSLEA----ALPFGP  184 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE------SCHHH----HGGGCC
T ss_pred             cCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe------ccccc----cccccc
Confidence            67999999999874 667766554 688 89999999998877643    4432 2221      12222    122237


Q ss_pred             ccEEEEcCCCh---HHHHHHHHhhccCCeEEEEEccC
Q 019822          223 VDYCFECTGVP---SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       223 ~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ||+|+......   ..++.+.+.|+++ |++++.|..
T Consensus       185 fD~V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgil  220 (254)
T d2nxca1         185 FDLLVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             EEEEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             cchhhhccccccHHHHHHHHHHhcCCC-cEEEEEecc
Confidence            99999655432   2456777889997 999986643

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.41  E-value=0.00019  Score=59.67  Aligned_cols=105  Identities=9%  Similarity=0.055  Sum_probs=70.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cC-CceEeCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FG-MTDFINPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg-a~~v~~~~~~~~~~~~~~i~  215 (335)
                      +...++++||++||=.|+|+ |.++..+|+..|. .+|++++.+++..+.+++    ++ ...+--.+    .+    +.
T Consensus        77 Ii~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~----~D----i~  147 (250)
T d1yb2a1          77 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR----SD----IA  147 (250)
T ss_dssp             ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC----SC----TT
T ss_pred             HHHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE----ee----ee
Confidence            34568899999999999875 7888889988764 389999999988887754    32 22221111    11    12


Q ss_pred             hhhCCCCccEEE-EcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          216 GITHGMGVDYCF-ECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       216 ~~~~g~g~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      +......||.|+ |.......++.+.+.|+++ |+++.+...
T Consensus       148 ~~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~P~  188 (250)
T d1yb2a1         148 DFISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLPN  188 (250)
T ss_dssp             TCCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEESS
T ss_pred             cccccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEeCC
Confidence            222334799887 4444445789999999998 999887543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.34  E-value=0.00083  Score=52.22  Aligned_cols=97  Identities=15%  Similarity=0.027  Sum_probs=64.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      +++|||+|+|.+|..+++.+...|. +|++++++.++.+.+.+ ++...+. ...   ........+...  ..|.++.+
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~-~~~---~~~~~~~~~~i~--~~~~~i~~   74 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPI-SLD---VNDDAALDAEVA--KHDLVISL   74 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEE-ECC---TTCHHHHHHHHT--TSSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccc-ccc---ccchhhhHhhhh--ccceeEee
Confidence            6899999999999999999998999 99999999999888754 4432222 121   111112222221  57888888


Q ss_pred             CCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          230 TGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       230 ~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ............++... -.++....
T Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~   99 (182)
T d1e5qa1          75 IPYTFHATVIKSAIRQK-KHVVTTSY   99 (182)
T ss_dssp             SCGGGHHHHHHHHHHHT-CEEECSSC
T ss_pred             ccchhhhHHHHHHHhhc-cceeeccc
Confidence            77664545555556664 56655543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=0.00066  Score=56.41  Aligned_cols=105  Identities=24%  Similarity=0.266  Sum_probs=69.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceE--eCCCCCCchhHHHHHHhhh--CCCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDF--INPDDEPNKSISELVKGIT--HGMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v--~~~~~~~~~~~~~~i~~~~--~g~g~  223 (335)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++ ++....  .|-.+  ..+..+.+++..  -| ++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g-~i   80 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ--EDDVKTLVSETIRRFG-RL   80 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS--HHHHHHHHHHHHHHHS-CC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCC--HHHHHHHHHHHHHhcC-CC
Confidence            6899999987 9999999999999999 99999999998887744 443222  23332  233333333322  13 69


Q ss_pred             cEEEEcCCChH--------------------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          224 DYCFECTGVPS--------------------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       224 d~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      |+++++.|...                          ..+.+++.+...+|+++.++....
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~  141 (250)
T d1ydea1          81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG  141 (250)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH
T ss_pred             CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc
Confidence            99999887310                          234445555443389998875543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.30  E-value=0.00072  Score=56.12  Aligned_cols=107  Identities=21%  Similarity=0.234  Sum_probs=73.5

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhh--CCCCc
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGIT--HGMGV  223 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~--~g~g~  223 (335)
                      .-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++.+...+ .|-.+  ..+..+.+++..  -| ++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~G-~i   77 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLED--ERERVRFVEEAAYALG-RV   77 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTC--HHHHHHHHHHHHHHHS-CC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhcC-CC
Confidence            357899999986 9999999999999999 99999999998888888776433 33332  233333333221  13 69


Q ss_pred             cEEEEcCCCh----------H---------------HHHHHHHhhccC-CeEEEEEccCCC
Q 019822          224 DYCFECTGVP----------S---------------LLSEALETTKVG-KGKVIVIGVGVD  258 (335)
Q Consensus       224 d~vid~~g~~----------~---------------~~~~~~~~l~~~-~G~~v~~g~~~~  258 (335)
                      |+++++.|..          +               ..+.+++.+... +|++|.++....
T Consensus        78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            9999988741          0               234455566432 389998876554

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.29  E-value=0.00036  Score=56.97  Aligned_cols=99  Identities=22%  Similarity=0.251  Sum_probs=68.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC----CceEeCCCCCCchhHHHHHHhh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG----MTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg----a~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      +.+...++++++||-+|+|+ |..++.+++. +. +|++++.+++..+.+++.-    ...++..+.      .   ..+
T Consensus        62 ml~~L~l~~g~~VLdIG~Gs-Gy~ta~La~l-~~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~------~---~g~  129 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEI-VD-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG------T---LGY  129 (224)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG------G---GCC
T ss_pred             HHHHhhhcccceEEEecCCC-CHHHHHHHHH-hc-ccccccccHHHHHHHHHHHhcccccccccCch------h---hcc
Confidence            45778999999999999874 8888888886 44 8999999998888775531    112222211      0   011


Q ss_pred             hCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          218 THGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .....||.|+-+.+.+.....+++.|+++ |+++..
T Consensus       130 ~~~~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p  164 (224)
T d1vbfa_         130 EEEKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP  164 (224)
T ss_dssp             GGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             hhhhhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence            12236999986655554557788999998 999875

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.26  E-value=0.00097  Score=55.06  Aligned_cols=78  Identities=18%  Similarity=0.270  Sum_probs=56.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceE-eCCCCCCchhHHHHHH---hhhCCCCc
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF-INPDDEPNKSISELVK---GITHGMGV  223 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~---~~~~g~g~  223 (335)
                      +++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++++..+ .|-.+  +.+..+.++   +.. | ++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~-g-~i   78 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD--PASVERGFAEALAHL-G-RL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC--HHHHHHHHHHHHHHH-S-SC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCC--HHHHHHHHHHHHHhc-C-Cc
Confidence            5789999987 9999999999999999 999999999888776 45665433 34333  233333333   322 3 69


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |+++++.|.
T Consensus        79 DilVnnAG~   87 (242)
T d1ulsa_          79 DGVVHYAGI   87 (242)
T ss_dssp             CEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999998874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.0014  Score=54.15  Aligned_cols=104  Identities=24%  Similarity=0.350  Sum_probs=69.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCc---eEeCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMT---DFINPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~---~v~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++..   ...|-.+  +.+..+.+++..  -| +
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g-~   78 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD--PASIESVLEKIRAEFG-E   78 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHTC-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC--HHHhhhhhhhhhcccC-C
Confidence            5789999987 9999999999999999 999999999887765 445432   2234333  233333333322  13 6


Q ss_pred             ccEEEEcCCChH-------------------------HHHHHHHhhc--cCCeEEEEEccCCC
Q 019822          223 VDYCFECTGVPS-------------------------LLSEALETTK--VGKGKVIVIGVGVD  258 (335)
Q Consensus       223 ~d~vid~~g~~~-------------------------~~~~~~~~l~--~~~G~~v~~g~~~~  258 (335)
                      +|+++++.|...                         ..+.+++.+.  .. |+++.++....
T Consensus        79 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~II~isS~~~  140 (243)
T d1q7ba_          79 VDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRH-GRIITIGSVVG  140 (243)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCHHH
T ss_pred             cceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCC-CEeeeecchhh
Confidence            999999876411                         3344555653  34 89999975544

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=0.00047  Score=57.14  Aligned_cols=78  Identities=19%  Similarity=0.272  Sum_probs=58.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCc-eEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMT-DFINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga~-~v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      -+++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+. +.. .+.|...   .+..+.+.+..+  ++|.
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~--~id~   77 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTK---KKQIDQFANEVE--RLDV   77 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTC---HHHHHHHHHHCS--CCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccc---cccccccccccc--ccee
Confidence            46889999987 9999999999999999 999999999888877554 322 2344443   555555555443  6999


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      ++++.|.
T Consensus        78 lVn~ag~   84 (245)
T d2ag5a1          78 LFNVAGF   84 (245)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9998775

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.21  E-value=0.0013  Score=54.79  Aligned_cols=79  Identities=18%  Similarity=0.245  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHH---HHHhhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISE---LVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~---~i~~~~  218 (335)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|-.+  ..+..+   .+.+..
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~--~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS--RTERDKLMQTVAHVF   81 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC--HHHHHHHHHHHHHHh
Confidence            6899999986 9999999999999999 999999999876654    3445433   234333  122222   333333


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      ++ .+|+++++.|.
T Consensus        82 ~g-~idilinnag~   94 (258)
T d1ae1a_          82 DG-KLNILVNNAGV   94 (258)
T ss_dssp             TS-CCCEEEECCCC
T ss_pred             CC-CcEEEeccccc
Confidence            34 68999998875

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.19  E-value=0.00092  Score=55.30  Aligned_cols=80  Identities=16%  Similarity=0.147  Sum_probs=56.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---EeCCCCCCchhHHHHHHhhh--CCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGIT--HGM  221 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~  221 (335)
                      -+++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|-.+  +.+..+.+++..  -+ 
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g-   79 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ--PAQWKAAVDTAVTAFG-   79 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC--HHHHHHHHHHHHHHHS-
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCC--HHHHHHHHHHHHHHhC-
Confidence            46899999987 9999999999999999 999999999888765 4554222   133332  233333333322  13 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|+++++.|.
T Consensus        80 ~idilinnAG~   90 (244)
T d1nffa_          80 GLHVLVNNAGI   90 (244)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCeEEEECCcc
Confidence            69999998875

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00058  Score=55.80  Aligned_cols=96  Identities=22%  Similarity=0.287  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCC-----c--eEeCCCCCCchhHHHHH
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGM-----T--DFINPDDEPNKSISELV  214 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lga-----~--~v~~~~~~~~~~~~~~i  214 (335)
                      .++++++||-+|+|+ |..++.+|+..|. .+|++++.+++-.+.+++    .+.     .  .+...+.         .
T Consensus        73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~---------~  142 (224)
T d1i1na_          73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG---------R  142 (224)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG---------G
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeec---------c
Confidence            689999999999975 8899999998763 389999999887666532    221     1  1111110         0


Q ss_pred             HhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          215 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ........||+|+-+...+...+.+++.|+++ |+++..
T Consensus       143 ~~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         143 MGYAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             cccchhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence            11122337999997665554567889999998 999874

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.13  E-value=0.00012  Score=60.80  Aligned_cols=101  Identities=23%  Similarity=0.300  Sum_probs=71.0

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce---EeCCCCCCchhHHHH
Q 019822          141 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD---FINPDDEPNKSISEL  213 (335)
Q Consensus       141 ~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~---v~~~~~~~~~~~~~~  213 (335)
                      .|...+++.|+++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|...   ....+          
T Consensus        24 ~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d----------   91 (245)
T d1nkva_          24 TLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND----------   91 (245)
T ss_dssp             HHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC----------
T ss_pred             HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhH----------
Confidence            356778999999999999864 6677788888898 99999999988776644    45321   11111          


Q ss_pred             HHhhhCCCCccEEEEcC------CChHHHHHHHHhhccCCeEEEEEc
Q 019822          214 VKGITHGMGVDYCFECT------GVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       214 i~~~~~g~g~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      +.++.....||+|+..-      .-...+..+.+.|+++ |+++...
T Consensus        92 ~~~~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~~  137 (245)
T d1nkva_          92 AAGYVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  137 (245)
T ss_dssp             CTTCCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             HhhccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEEe
Confidence            11222334799998532      2245778889999998 9988764

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.12  E-value=0.00016  Score=59.70  Aligned_cols=102  Identities=19%  Similarity=0.158  Sum_probs=64.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCC---chhHHHHHHhhhCCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP---NKSISELVKGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~---~~~~~~~i~~~~~g~g~d~  225 (335)
                      ++++|||+|+ +++|.+.++.+...|+ +|+.+++++++...     ....+......   .......+.+..+..++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----ccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999987 9999999999999999 99999876543211     11111111100   0112333334444447999


Q ss_pred             EEEcCCCh-----------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          226 CFECTGVP-----------S---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       226 vid~~g~~-----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      ++++.|.-           +               ..+.+++.+.++ |+++.++....
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~~~  132 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAKAA  132 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccHHH
Confidence            99988730           0               223345567786 99999976654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.12  E-value=0.0023  Score=49.94  Aligned_cols=93  Identities=17%  Similarity=0.148  Sum_probs=60.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeC-------CCCCCchhHHHHHHhhhCCCCcc
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFIN-------PDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~-------~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      +++.|+|+|.+|.+.+..+...|. +|.++++++++.+.+++.+......       .......+..+.+      +.+|
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~------~~aD   74 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV------KDAD   74 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH------TTCS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh------cCCC
Confidence            689999999999999999999999 9999999999988887655221110       0000001222222      2689


Q ss_pred             EEEEcCCChH---HHHHHHHhhccCCeEEEE
Q 019822          225 YCFECTGVPS---LLSEALETTKVGKGKVIV  252 (335)
Q Consensus       225 ~vid~~g~~~---~~~~~~~~l~~~~G~~v~  252 (335)
                      ++|-++....   .++.+...+.++ ..++.
T Consensus        75 ~iii~v~~~~~~~~~~~i~~~l~~~-~~iv~  104 (184)
T d1bg6a2          75 VILIVVPAIHHASIAANIASYISEG-QLIIL  104 (184)
T ss_dssp             EEEECSCGGGHHHHHHHHGGGCCTT-CEEEE
T ss_pred             EEEEEEchhHHHHHHHHhhhccCCC-CEEEE
Confidence            9999998762   233344455554 44443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.002  Score=50.61  Aligned_cols=75  Identities=16%  Similarity=0.194  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcC----C-ceEeCCCCCCchhHHHHHHhhhC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFG----M-TDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lg----a-~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      -.+++|||+|+|+.+.+++..+...|+++++.+.+++++.+.+    ++++    . ..+.+..+  ...+...+     
T Consensus        16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----   88 (182)
T d1vi2a1          16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD--QQAFAEAL-----   88 (182)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC--HHHHHHHH-----
T ss_pred             cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc--ccchhhhh-----
Confidence            4678999999999999999999889998999999987765543    2222    1 12333333  01122222     


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                       ..+|++|+|++
T Consensus        89 -~~~diiIN~Tp   99 (182)
T d1vi2a1          89 -ASADILTNGTK   99 (182)
T ss_dssp             -HTCSEEEECSS
T ss_pred             -cccceeccccC
Confidence             15899999986

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.07  E-value=0.0013  Score=54.62  Aligned_cols=79  Identities=19%  Similarity=0.228  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---EeCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|-.+  +.+..+.+++..  -| +
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g-~   79 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI--EEDWQRVVAYAREEFG-S   79 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC--HHHHHHHHHHHHHHHS-C
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCC--HHHHHHHHHHHHHHcC-C
Confidence            6899999987 9999999999999999 999999999887765 5665322   233332  133333333221  13 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|+++++.|.
T Consensus        80 iDilVnnAg~   89 (254)
T d1hdca_          80 VDGLVNNAGI   89 (254)
T ss_dssp             CCEEEECCCC
T ss_pred             ccEEEecCcc
Confidence            9999998874

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.07  E-value=0.0013  Score=51.88  Aligned_cols=99  Identities=10%  Similarity=0.007  Sum_probs=66.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-c-----------------eEe--C
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-T-----------------DFI--N  201 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga-~-----------------~v~--~  201 (335)
                      .+....+.|+++||.+|+|. |..+..||+ .|+ +|++++.|++..+.+++... .                 ..+  +
T Consensus        12 ~~~~l~~~~~~rvLd~GCG~-G~~a~~la~-~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   88 (201)
T d1pjza_          12 YWSSLNVVPGARVLVPLCGK-SQDMSWLSG-QGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD   88 (201)
T ss_dssp             HHHHHCCCTTCEEEETTTCC-SHHHHHHHH-HCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC
T ss_pred             HHHHcCCCCCCEEEEecCcC-CHHHHHHHH-cCC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccc
Confidence            35567899999999999975 788888887 499 99999999999988865311 0                 000  1


Q ss_pred             CCCCCchhHHHHHHhhhCCCCccEEEEcCCC--------hHHHHHHHHhhccCCeEEEEEc
Q 019822          202 PDDEPNKSISELVKGITHGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       202 ~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ..+   ...  .     ....+|+|++....        ...++.+.+.|+++ |++++..
T Consensus        89 ~~~---l~~--~-----~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          89 FFA---LTA--R-----DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             CSS---STH--H-----HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             ccc---ccc--c-----cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence            111   000  0     11268999875431        23567888999997 9876654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.06  E-value=0.0023  Score=49.26  Aligned_cols=87  Identities=18%  Similarity=0.256  Sum_probs=61.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC-ceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      +|.|+|.|.+|...+..++..|. +|++.++++++.+.+++.+. +...+..+           ..   +..|+||-|+.
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~~-----------~~---~~~DiIilavp   66 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLS-----------LL---QTAKIIFLCTP   66 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGG-----------GG---TTCSEEEECSC
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeecc-----------cc---cccccccccCc
Confidence            58899999999999888889999 99999999999999988884 33322211           11   26899999886


Q ss_pred             Ch---HHHHHHHHhhccCCeEEEEEcc
Q 019822          232 VP---SLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       232 ~~---~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ..   ..++.+...+.++ ..++.++.
T Consensus        67 ~~~~~~vl~~l~~~l~~~-~iv~~~~s   92 (165)
T d2f1ka2          67 IQLILPTLEKLIPHLSPT-AIVTDVAS   92 (165)
T ss_dssp             HHHHHHHHHHHGGGSCTT-CEEEECCS
T ss_pred             Hhhhhhhhhhhhhhcccc-cceeeccc
Confidence            44   2334444444554 45555543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.01  E-value=0.00093  Score=55.68  Aligned_cols=79  Identities=18%  Similarity=0.239  Sum_probs=56.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---EeCCCCCCchhHHHHHHhhh--CCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      +++++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+ +++|...   ..|-.+  +.+..+.+++..  -| +
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~~~g-~   79 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTD--QASIDRCVAELLDRWG-S   79 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC--HHHHHHHHHHHHHHHS-C
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCC--HHHHHHHHHHHHHHhC-C
Confidence            5789999987 9999999999999999 999999998887764 6676433   234333  233333333322  13 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|+++++.|.
T Consensus        80 iDilVnnAg~   89 (256)
T d1k2wa_          80 IDILVNNAAL   89 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             ccEEEeeccc
Confidence            9999998874

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.01  E-value=0.0023  Score=52.36  Aligned_cols=72  Identities=18%  Similarity=0.142  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      +++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+   +.+...+ .|-.+    .. +.+.+.. + ++|+++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l~---~~~~~~~~~Dv~~----~~-~~~~~~~-g-~iD~lV   71 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELLK---RSGHRYVVCDLRK----DL-DLLFEKV-K-EVDILV   71 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHH---HTCSEEEECCTTT----CH-HHHHHHS-C-CCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHH---hcCCcEEEcchHH----HH-HHHHHHh-C-CCcEEE
Confidence            5789999987 9999999999999999 9999999876554   4454332 23222    23 3333333 3 699999


Q ss_pred             EcCCC
Q 019822          228 ECTGV  232 (335)
Q Consensus       228 d~~g~  232 (335)
                      ++.|.
T Consensus        72 nnAG~   76 (234)
T d1o5ia_          72 LNAGG   76 (234)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            98874

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.00  E-value=0.0033  Score=46.44  Aligned_cols=74  Identities=22%  Similarity=0.218  Sum_probs=54.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-cCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-FGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      +|+|+|.|.+|..+++.+...|. +|++++.++++.+.+++ ++.. ++..+.   . -.+.+++. +=+.+|.++-+++
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~---~-~~~~l~~~-~i~~a~~vv~~t~   74 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDC---T-KIKTLEDA-GIEDADMYIAVTG   74 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCT---T-SHHHHHHT-TTTTCSEEEECCS
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcc---c-chhhhhhc-ChhhhhhhcccCC
Confidence            58999999999999999999999 99999999999888754 5654 443332   1 12233333 2247899999888


Q ss_pred             Ch
Q 019822          232 VP  233 (335)
Q Consensus       232 ~~  233 (335)
                      ..
T Consensus        75 ~d   76 (132)
T d1lssa_          75 KE   76 (132)
T ss_dssp             CH
T ss_pred             cH
Confidence            76

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.98  E-value=0.00094  Score=56.30  Aligned_cols=77  Identities=21%  Similarity=0.206  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCce---EeCCCCCCchhHHHHHH---hhhCCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTD---FINPDDEPNKSISELVK---GITHGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~---~~~~g~  221 (335)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++...   ..|-.+  ..+..+.+.   +.. | 
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~-g-   78 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS--LEDQKQAASRCVARF-G-   78 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC--HHHHHHHHHHHHHHH-S-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc--HHHHHHHHHHHHHHh-C-
Confidence            6899999987 9999999999999999 999999999988765 4555322   223333  122333332   222 3 


Q ss_pred             CccEEEEcCC
Q 019822          222 GVDYCFECTG  231 (335)
Q Consensus       222 g~d~vid~~g  231 (335)
                      ++|+++++.|
T Consensus        79 ~idilvnnAG   88 (276)
T d1bdba_          79 KIDTLIPNAG   88 (276)
T ss_dssp             CCCEEECCCC
T ss_pred             Cccccccccc
Confidence            6999998876

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.97  E-value=0.0012  Score=54.64  Aligned_cols=80  Identities=24%  Similarity=0.248  Sum_probs=55.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhcCCc--eE--eCCCCCCchh---HHHHHHhhhCCC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAFGMT--DF--INPDDEPNKS---ISELVKGITHGM  221 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~lga~--~v--~~~~~~~~~~---~~~~i~~~~~g~  221 (335)
                      .++|||+|+ +++|.+.++.+...|+. +|+.+++++++.+.+++....  ++  +|-.+  ..+   +.+.+.+..+..
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC--DKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC--HHHHHHHHHHHHHHHGGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC--HHHHHHHHHHHHHHhCCC
Confidence            478999987 99999999888778863 799999999998888765322  22  23333  122   333444444445


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|+++++.|.
T Consensus        81 ~idilinnAG~   91 (250)
T d1yo6a1          81 GLSLLINNAGV   91 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CeEEEEEcCcc
Confidence            69999998873

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.96  E-value=0.0018  Score=54.18  Aligned_cols=79  Identities=22%  Similarity=0.279  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC---ceE--eCCCCCCchhHHHHHHhhh--C
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM---TDF--INPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga---~~v--~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      -+++.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.   ...  .|-.+  +.+..+.+++..  .
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK--DEDVRNLVDTTIAKH   80 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            36899999987 9999999999999999 999999999887765 34432   112  23332  233333333321  1


Q ss_pred             CCCccEEEEcCC
Q 019822          220 GMGVDYCFECTG  231 (335)
Q Consensus       220 g~g~d~vid~~g  231 (335)
                      | ++|+++++.|
T Consensus        81 g-~iD~lVnnAG   91 (268)
T d2bgka1          81 G-KLDIMFGNVG   91 (268)
T ss_dssp             S-CCCEEEECCC
T ss_pred             C-Ccceeccccc
Confidence            3 6999999887

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.96  E-value=0.0017  Score=54.11  Aligned_cols=80  Identities=16%  Similarity=0.254  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhhC--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGITH--  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~~--  219 (335)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|-.+  +.+..+.+++...  
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS--RSERQELMNTVANHF   83 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC--HHHHHHHHHHHHHHh
Confidence            6899999987 9999999999999999 999999999887654    3334322   233332  2333333333222  


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      +..+|+++++.|.
T Consensus        84 ~~~idilvnnAG~   96 (259)
T d2ae2a_          84 HGKLNILVNNAGI   96 (259)
T ss_dssp             TTCCCEEEECCCC
T ss_pred             CCCceEEEECCce
Confidence            2269999998874

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.93  E-value=0.0051  Score=47.40  Aligned_cols=93  Identities=19%  Similarity=0.234  Sum_probs=66.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCC-ceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGM-TDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      ++|+|+|.|.+|...+.-++..|. .+|++++++++.++.+++.+. +.+....+           .. .-...|+|+-|
T Consensus         2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~-----------~~-~~~~~dlIila   69 (171)
T d2g5ca2           2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA-----------KV-EDFSPDFVMLS   69 (171)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG-----------GG-GGTCCSEEEEC
T ss_pred             CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh-----------hh-hcccccccccc
Confidence            369999999999999988888885 389999999999999999885 33433221           11 11268999998


Q ss_pred             CCChH---HHHHHHHhhccCCeEEEEEccCC
Q 019822          230 TGVPS---LLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       230 ~g~~~---~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      +....   .+..+.+.+.++ ..++.++..-
T Consensus        70 ~p~~~~~~vl~~l~~~~~~~-~ii~d~~s~k   99 (171)
T d2g5ca2          70 SPVRTFREIAKKLSYILSED-ATVTDQGSVK   99 (171)
T ss_dssp             SCHHHHHHHHHHHHHHSCTT-CEEEECCSCC
T ss_pred             CCchhhhhhhhhhhcccccc-cccccccccc
Confidence            87542   344555666775 6777776543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.91  E-value=0.002  Score=52.98  Aligned_cols=80  Identities=19%  Similarity=0.294  Sum_probs=56.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceE---eCCCCCCchhHHHHHHhhhC--CC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDF---INPDDEPNKSISELVKGITH--GM  221 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v---~~~~~~~~~~~~~~i~~~~~--g~  221 (335)
                      -.|+++||+|+ +++|.+.++-+...|+ +|+.+++++++.+.+ ++++.+..   .|-.+  +.+..+.+++...  | 
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~--~~~i~~~~~~i~~~~g-   78 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD--PKAVEAVFAEALEEFG-   78 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS--HHHHHHHHHHHHHHHS-
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCC--HHHHHHHHHHHHHHhC-
Confidence            46899999987 9999999999999999 999999999887665 66774332   23322  1333333333221  3 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|+++++.+.
T Consensus        79 ~iDiLinnAg~   89 (241)
T d2a4ka1          79 RLHGVAHFAGV   89 (241)
T ss_dssp             CCCEEEEGGGG
T ss_pred             CccEecccccc
Confidence            69999997764

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.91  E-value=0.0032  Score=45.16  Aligned_cols=92  Identities=10%  Similarity=-0.058  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      .+++|||+|+|.+|..-++.+...|+ +|++++....  -.+++++-+....-...+  +.++          .++++|+
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~--~~dl----------~~~~lv~   77 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGMLTLVEGPFD--ETLL----------DSCWLAI   77 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSCEEEESSCC--GGGG----------TTCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCceeeccCCC--HHHh----------CCCcEEe
Confidence            57899999999999999999999999 8888764432  223333322322221111  1221          2689999


Q ss_pred             EcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          228 ECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       228 d~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .+++....-........+. |.++=+.+
T Consensus        78 ~at~d~~~n~~i~~~a~~~-~ilVNv~D  104 (113)
T d1pjqa1          78 AATDDDTVNQRVSDAAESR-RIFCNVVD  104 (113)
T ss_dssp             ECCSCHHHHHHHHHHHHHT-TCEEEETT
T ss_pred             ecCCCHHHHHHHHHHHHHc-CCEEEeCC
Confidence            9998885545666777775 77765543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.91  E-value=0.0019  Score=53.50  Aligned_cols=103  Identities=17%  Similarity=0.344  Sum_probs=67.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-----HhcCCce---EeCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-----KAFGMTD---FINPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-----~~lga~~---v~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+     ++.|...   ..|-.+  +.+..+.+++..  
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN--YEEVKKLLEAVKEK   80 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 999999998876543     3445432   224332  233333333221  


Q ss_pred             CCCCccEEEEcCCChH-------------------------HHHHHHHhhccC-CeEEEEEccC
Q 019822          219 HGMGVDYCFECTGVPS-------------------------LLSEALETTKVG-KGKVIVIGVG  256 (335)
Q Consensus       219 ~g~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~-~G~~v~~g~~  256 (335)
                      -| ++|+++++.|...                         ..+.+++.+... +|+++.++..
T Consensus        81 ~g-~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~  143 (251)
T d1vl8a_          81 FG-KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL  143 (251)
T ss_dssp             HS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred             cC-CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            13 6999999887411                         334556666432 3799988753

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.89  E-value=0.0022  Score=54.28  Aligned_cols=102  Identities=13%  Similarity=0.112  Sum_probs=70.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      +.+++++++|++||=+|+|- |..+..+|+..|+ +|++++.|++..+.++    +.|....+....   .++     +.
T Consensus        53 ~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~---~d~-----~~  122 (291)
T d1kpia_          53 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGW-----EE  122 (291)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE---CCG-----GG
T ss_pred             HHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh---hcc-----cc
Confidence            56788999999999999863 5678889999999 9999999999877653    345332211111   111     12


Q ss_pred             hCCCCccEEEE-----cCCC----------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          218 THGMGVDYCFE-----CTGV----------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       218 ~~g~g~d~vid-----~~g~----------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ..+ .||.|+.     -++.          +..++.+.+.|+|+ |+++.-..
T Consensus       123 ~~~-~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~i  173 (291)
T d1kpia_         123 FDE-PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI  173 (291)
T ss_dssp             CCC-CCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEEE
T ss_pred             ccc-ccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEEE
Confidence            233 7998875     2222          24678899999998 99886543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.88  E-value=0.0071  Score=46.21  Aligned_cols=89  Identities=19%  Similarity=0.199  Sum_probs=64.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      +|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+++.++.. .       .+..+.++      ..|++|-|+..
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~-~-------~~~~e~~~------~~d~ii~~v~~   66 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET-A-------STAKAIAE------QCDVIITMLPN   66 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------SSHHHHHH------HCSEEEECCSS
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhh-c-------ccHHHHHh------CCCeEEEEcCC
Confidence            47889999999998888888999 9999999999999998887642 1       11222232      47999999987


Q ss_pred             hHHHHHHH-------HhhccCCeEEEEEccCC
Q 019822          233 PSLLSEAL-------ETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       233 ~~~~~~~~-------~~l~~~~G~~v~~g~~~  257 (335)
                      +...+..+       ..+.++ ..++.++...
T Consensus        67 ~~~v~~v~~~~~~~~~~~~~g-~iiid~sT~~   97 (161)
T d1vpda2          67 SPHVKEVALGENGIIEGAKPG-TVLIDMSSIA   97 (161)
T ss_dssp             HHHHHHHHHSTTCHHHHCCTT-CEEEECSCCC
T ss_pred             HHHHHHHHhCCcchhhccCCC-CEEEECCCCC
Confidence            65555543       344554 5667766544

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.0042  Score=51.14  Aligned_cols=106  Identities=17%  Similarity=0.194  Sum_probs=70.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh--
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~--  218 (335)
                      -.|+.+||+|+ +++|.+.+.-+...|+ +|+.+++++++.+.+    ++.|...   ..|..+  ..+..+.+++..  
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN--REDIYSSAKKVKAE   81 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHH
Confidence            36899999987 9999999999999999 999999999887765    3444321   234443  233333333322  


Q ss_pred             CCCCccEEEEcCCChH-------------------------HHHHHHHhhccC-CeEEEEEccCCC
Q 019822          219 HGMGVDYCFECTGVPS-------------------------LLSEALETTKVG-KGKVIVIGVGVD  258 (335)
Q Consensus       219 ~g~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~-~G~~v~~g~~~~  258 (335)
                      .| .+|+++++.|...                         ..+.+++.+..+ +|+++.++....
T Consensus        82 ~g-~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          82 IG-DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             TC-CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             cC-CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            23 6999999888511                         223445555432 389999887665

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.87  E-value=0.00061  Score=57.77  Aligned_cols=100  Identities=12%  Similarity=0.124  Sum_probs=70.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCC-ceE-eCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM-TDF-INPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga-~~v-~~~~~~~~~~~~~~i~  215 (335)
                      +.+++++++|++||=+|+|- |..++.+|+..|+ +|++++.|++..+++++    .|- +.+ +...     ++    +
T Consensus        54 ~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-----d~----~  122 (285)
T d1kpga_          54 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-----GW----E  122 (285)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-----CG----G
T ss_pred             HHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-----hh----h
Confidence            55778899999999999874 7788899999999 99999999998888754    231 111 1111     11    1


Q ss_pred             hhhCCCCccEEEE-----cCCC---hHHHHHHHHhhccCCeEEEEEcc
Q 019822          216 GITHGMGVDYCFE-----CTGV---PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       216 ~~~~g~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ++ ++ .+|.|+.     .++.   ...++.+.+.|+++ |+++....
T Consensus       123 ~~-~~-~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~i  167 (285)
T d1kpga_         123 QF-DE-PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  167 (285)
T ss_dssp             GC-CC-CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             cc-cc-cccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEEE
Confidence            22 23 6888764     3332   24678899999998 99886543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.84  E-value=0.0027  Score=52.81  Aligned_cols=79  Identities=19%  Similarity=0.236  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc---eEeCCCCCCchhHHHHHHh---hh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT---DFINPDDEPNKSISELVKG---IT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~---~v~~~~~~~~~~~~~~i~~---~~  218 (335)
                      +++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+..   ...|-.+  +.+..+.+++   ..
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL--RPEREKLMQTVSSMF   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC--HHHHHHHHHHHHHHh
Confidence            6889999987 9999999999999999 999999999887664    223322   1234333  1333333333   23


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      +| .+|+++++.|.
T Consensus        84 ~g-~idilvnnAG~   96 (259)
T d1xq1a_          84 GG-KLDILINNLGA   96 (259)
T ss_dssp             TT-CCSEEEEECCC
T ss_pred             CC-Ccccccccccc
Confidence            34 69999998875

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.84  E-value=0.0017  Score=48.02  Aligned_cols=74  Identities=19%  Similarity=0.293  Sum_probs=54.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGV  232 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~  232 (335)
                      +++|+|.|.+|..+++.+...|. +|++++.++++.+.+++.+...++ .+.++ .+.   +++. +=..+|.++-+++.
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~-gd~~~-~~~---l~~a-~i~~a~~vi~~~~~   74 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANATE-ENE---LLSL-GIRNFEYVIVAIGA   74 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEE-CCTTC-TTH---HHHH-TGGGCSEEEECCCS
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCccee-eeccc-chh---hhcc-CCccccEEEEEcCc
Confidence            57888999999999999999999 999999999999999888864443 22211 332   2222 12367888887775


Q ss_pred             h
Q 019822          233 P  233 (335)
Q Consensus       233 ~  233 (335)
                      .
T Consensus        75 ~   75 (134)
T d2hmva1          75 N   75 (134)
T ss_dssp             C
T ss_pred             h
Confidence            4

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.0033  Score=52.07  Aligned_cols=105  Identities=17%  Similarity=0.186  Sum_probs=67.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc----CC-ce---EeCCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF----GM-TD---FINPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l----ga-~~---v~~~~~~~~~~~~~~i~~~~-  218 (335)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++    +. ..   ..|-.+  ..+..+.+++.. 
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~   78 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD--QQQLRDTFRKVVD   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC--HHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 999999999887664 222    11 11   224332  233333333322 


Q ss_pred             -CCCCccEEEEcCCChH-----------------HHHHHHHhhccC----CeEEEEEccCCC
Q 019822          219 -HGMGVDYCFECTGVPS-----------------LLSEALETTKVG----KGKVIVIGVGVD  258 (335)
Q Consensus       219 -~g~g~d~vid~~g~~~-----------------~~~~~~~~l~~~----~G~~v~~g~~~~  258 (335)
                       -| ++|+++++.|...                 ....+++.+.+.    .|+++.++...+
T Consensus        79 ~~G-~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~  139 (254)
T d2gdza1          79 HFG-RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG  139 (254)
T ss_dssp             HHS-CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred             HcC-CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh
Confidence             13 6999999887511                 223344444321    278998876554

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.83  E-value=0.0017  Score=54.01  Aligned_cols=78  Identities=18%  Similarity=0.193  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHH---hhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVK---GIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~---~~~  218 (335)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|-.+  +.+..+.++   +..
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~--~~~~~~~~~~~~~~~   86 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFAISKL   86 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence            6889999987 9999999999999999 999999998876654    4455332   223322  233333232   222


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                       | ++|+++++.|.
T Consensus        87 -g-~iDilvnnAG~   98 (255)
T d1fmca_          87 -G-KVDILVNNAGG   98 (255)
T ss_dssp             -S-SCCEEEECCCC
T ss_pred             -C-CCCEeeeCCcC
Confidence             3 69999998874

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.82  E-value=0.0025  Score=53.03  Aligned_cols=78  Identities=23%  Similarity=0.331  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHH---hhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVK---GIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~---~~~  218 (335)
                      +|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|-.+  +.+..+.++   +..
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   80 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS--EEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            6899999987 9999999999999999 999999999887654    3345332   233332  133333333   222


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                       | ++|+++++.|.
T Consensus        81 -g-~iDilVnnaG~   92 (260)
T d1zema1          81 -G-KIDFLFNNAGY   92 (260)
T ss_dssp             -S-CCCEEEECCCC
T ss_pred             -C-CCCeehhhhcc
Confidence             3 69999998773

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.82  E-value=0.0028  Score=52.47  Aligned_cols=79  Identities=20%  Similarity=0.250  Sum_probs=54.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC--c-eE--eCCCCCCchhH---HHHHHhhh
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM--T-DF--INPDDEPNKSI---SELVKGIT  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga--~-~v--~~~~~~~~~~~---~~~i~~~~  218 (335)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++.  . ..  .|-.+  +.+.   .+.+.+..
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD--EDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC--HHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence            36889999987 9999999999999999 999999999887765 33331  1 12  23332  1222   23333333


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                       | ++|+++++.|.
T Consensus        81 -G-~iDiLVnnAg~   92 (251)
T d1zk4a1          81 -G-PVSTLVNNAGI   92 (251)
T ss_dssp             -S-SCCEEEECCCC
T ss_pred             -C-CceEEEecccc
Confidence             3 69999998875

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0029  Score=52.55  Aligned_cols=79  Identities=20%  Similarity=0.374  Sum_probs=54.9

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC-ceE----eCCCCCCchhHHHH---HH
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM-TDF----INPDDEPNKSISEL---VK  215 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga-~~v----~~~~~~~~~~~~~~---i~  215 (335)
                      -+++++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.+. ..+    .|-.+  +.+..+.   +.
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~--~~~v~~~v~~~~   84 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN--EEDILSMFSAIR   84 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC--HHHHHHHHHHHH
Confidence            46889999987 9999999999999999 999999999887764    33332 122    23332  2333333   33


Q ss_pred             hhhCCCCccEEEEcCCC
Q 019822          216 GITHGMGVDYCFECTGV  232 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~  232 (335)
                      +.. | ++|++|++.|.
T Consensus        85 ~~~-g-~iD~lVnnAg~   99 (257)
T d1xg5a_          85 SQH-S-GVDICINNAGL   99 (257)
T ss_dssp             HHH-C-CCSEEEECCCC
T ss_pred             Hhc-C-CCCEEEecccc
Confidence            333 3 69999998875

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0011  Score=53.09  Aligned_cols=96  Identities=15%  Similarity=0.127  Sum_probs=62.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      -++|+|+|+ |.+|..++..+...|. +|.+++|++++.......+...+. |..+     . +.+.+...  +.|+||.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~gD~~d-----~-~~l~~al~--~~d~vi~   73 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQ-----A-ADVDKTVA--GQDAVIV   73 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTTS-----H-HHHHHHHT--TCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccccccccccc-----h-hhHHHHhc--CCCEEEE
Confidence            468999997 9999999998888899 999999998886554444443332 2222     2 23433333  5899999


Q ss_pred             cCCChH----------HHHHHHHhhccC-CeEEEEEcc
Q 019822          229 CTGVPS----------LLSEALETTKVG-KGKVIVIGV  255 (335)
Q Consensus       229 ~~g~~~----------~~~~~~~~l~~~-~G~~v~~g~  255 (335)
                      ++|...          ....+++.+... -.+++.++.
T Consensus        74 ~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          74 LLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            987521          123444444442 137887764

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.78  E-value=0.0064  Score=50.53  Aligned_cols=106  Identities=17%  Similarity=0.218  Sum_probs=73.5

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----c-C--CceE-eCCCCCCchhHH
Q 019822          141 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----F-G--MTDF-INPDDEPNKSIS  211 (335)
Q Consensus       141 ~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----l-g--a~~v-~~~~~~~~~~~~  211 (335)
                      .+...++++||++||=.|+|+ |.++..||+..|. .+|+.++.+++..+.+++    + +  .+.+ +...+     ..
T Consensus        87 ~Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d-----~~  160 (264)
T d1i9ga_          87 QIVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD-----LA  160 (264)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC-----GG
T ss_pred             HHHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecc-----cc
Confidence            356789999999999999875 8899999999874 399999999998887754    2 1  1221 11111     10


Q ss_pred             HHHHhhhCCCCccEEE-EcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          212 ELVKGITHGMGVDYCF-ECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       212 ~~i~~~~~g~g~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                         ........+|.|| |--.-...+..+.+.|+++ |+++.+...
T Consensus       161 ---~~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~P~  202 (264)
T d1i9ga_         161 ---DSELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVAT  202 (264)
T ss_dssp             ---GCCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEESS
T ss_pred             ---cccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEeCc
Confidence               0111233789877 5433345788999999998 999887543

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.78  E-value=0.0042  Score=52.48  Aligned_cols=81  Identities=11%  Similarity=0.017  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-----HhcCCce-E--eCCCCCCchhHHHHHHhhh-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-----KAFGMTD-F--INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-----~~lga~~-v--~~~~~~~~~~~~~~i~~~~-  218 (335)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+     ++.|... .  .|-.+  ..+..+.+.... 
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~--~~~v~~~~~~~~~   99 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD--PDMVQNTVSELIK   99 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccC--hHHHHHHhhhhhh
Confidence            36799999986 9999999999999999 999999998876543     2334322 2  23332  122222222211 


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      ...++|+++++.|.
T Consensus       100 ~~g~iDilvnnAg~  113 (294)
T d1w6ua_         100 VAGHPNIVINNAAG  113 (294)
T ss_dssp             HTCSCSEEEECCCC
T ss_pred             hccccchhhhhhhh
Confidence            12279999998874

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.76  E-value=0.00091  Score=56.54  Aligned_cols=101  Identities=11%  Similarity=0.148  Sum_probs=69.1

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eEeCCCCCCchhHHHHHH
Q 019822          141 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVK  215 (335)
Q Consensus       141 ~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~  215 (335)
                      .+.+.+++++|++||=+|+|. |..+..+++..|+ +|++++.|++..+.+++    .|.. .+....    .+    .+
T Consensus        43 ~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~----~d----~~  112 (280)
T d2fk8a1          43 LNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL----QG----WE  112 (280)
T ss_dssp             HHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE----SC----GG
T ss_pred             HHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh----hh----hh
Confidence            356778899999999999864 5567788888899 99999999999887754    3421 111111    01    11


Q ss_pred             hhhCCCCccEEEE-----cCCC---hHHHHHHHHhhccCCeEEEEEc
Q 019822          216 GITHGMGVDYCFE-----CTGV---PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       216 ~~~~g~g~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ++ .+ .+|.|+.     .++.   +..++.+.+.|+|+ |+++.-.
T Consensus       113 ~~-~~-~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~~  156 (280)
T d2fk8a1         113 DF-AE-PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQS  156 (280)
T ss_dssp             GC-CC-CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             hh-cc-chhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEEE
Confidence            12 23 6898874     2232   24578899999998 9987753

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.76  E-value=0.0033  Score=52.69  Aligned_cols=78  Identities=18%  Similarity=0.250  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC--ce----EeCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM--TD----FINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga--~~----v~~~~~~~~~~~~~~i~~~~  218 (335)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+.  ..    ..|-.+  +.+..+.+++..
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~--~~~v~~~~~~~~   79 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE--ASGQDDIINTTL   79 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC--HHHHHHHHHHHH
Confidence            5889999987 9999999999999999 999999999887654    33332  11    234333  233333333321


Q ss_pred             --CCCCccEEEEcCC
Q 019822          219 --HGMGVDYCFECTG  231 (335)
Q Consensus       219 --~g~g~d~vid~~g  231 (335)
                        -| ++|+++++.|
T Consensus        80 ~~~G-~iDilVnnAG   93 (274)
T d1xhla_          80 AKFG-KIDILVNNAG   93 (274)
T ss_dssp             HHHS-CCCEEEECCC
T ss_pred             HHcC-CceEEEeecc
Confidence              13 6999999876

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.76  E-value=0.0016  Score=52.93  Aligned_cols=96  Identities=21%  Similarity=0.322  Sum_probs=61.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHc---CC---CEEEEEcCChhhHHHHHh---------cCCceE--eCCCCCCchh
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMH---GA---AKIIGIDKNPWKKEKGKA---------FGMTDF--INPDDEPNKS  209 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~---G~---~~V~~~~~~~~~~~~~~~---------lga~~v--~~~~~~~~~~  209 (335)
                      .++++++||.+|+|+ |+.++.+++..   |.   .+|+.++.+++-.+.+++         .+...+  +..+.     
T Consensus        77 ~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~-----  150 (223)
T d1r18a_          77 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG-----  150 (223)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG-----
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccc-----
Confidence            689999999999753 66666666654   32   279999988876555532         121112  21111     


Q ss_pred             HHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEE
Q 019822          210 ISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       210 ~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                          .........||.|+-+.+-+...+..++.|+++ |+++..
T Consensus       151 ----~~~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~p  189 (223)
T d1r18a_         151 ----RKGYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  189 (223)
T ss_dssp             ----GGCCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             ----ccccccccceeeEEEEeechhchHHHHHhcCCC-cEEEEE
Confidence                011122337999987666554557888999998 999774

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.73  E-value=0.0061  Score=50.45  Aligned_cols=78  Identities=17%  Similarity=0.196  Sum_probs=53.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh--CC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT--HG  220 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g  220 (335)
                      ++.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|-.+  +.+..+.+++..  -|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS--VPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence            567799987 9999999999999999 999999998877654    3445332   223333  233333333322  13


Q ss_pred             CCccEEEEcCCC
Q 019822          221 MGVDYCFECTGV  232 (335)
Q Consensus       221 ~g~d~vid~~g~  232 (335)
                       ++|+++++.|.
T Consensus        79 -~iDilVnnAG~   89 (257)
T d2rhca1          79 -PVDVLVNNAGR   89 (257)
T ss_dssp             -SCSEEEECCCC
T ss_pred             -CCCEEEecccc
Confidence             69999998874

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.71  E-value=0.0052  Score=50.96  Aligned_cols=78  Identities=21%  Similarity=0.225  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hc--CCce---EeCCCCCCchhHHHHHHhhh-
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AF--GMTD---FINPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~l--ga~~---v~~~~~~~~~~~~~~i~~~~-  218 (335)
                      +++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.  +...   ..|-.+  +.+..+.+.+.. 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~~   79 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD--EAQVEAYVTATTE   79 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC--HHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 9999999998876542    22  2221   124333  233333333221 


Q ss_pred             -CCCCccEEEEcCC
Q 019822          219 -HGMGVDYCFECTG  231 (335)
Q Consensus       219 -~g~g~d~vid~~g  231 (335)
                       -| ++|+++++.|
T Consensus        80 ~~G-~iDiLVnnAG   92 (258)
T d1iy8a_          80 RFG-RIDGFFNNAG   92 (258)
T ss_dssp             HHS-CCSEEEECCC
T ss_pred             HhC-CCCEEEECCc
Confidence             13 6999999876

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.68  E-value=0.0023  Score=52.27  Aligned_cols=93  Identities=16%  Similarity=0.194  Sum_probs=67.2

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      ..++.+||=+|+|+ |..+..+++ .|+ +|++++.+++..+.+++.+....+..+.   .++     .+.++ .+|+|+
T Consensus        40 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~---~~l-----~~~~~-~fD~ii  107 (246)
T d2avna1          40 LKNPCRVLDLGGGT-GKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKA---EDL-----PFPSG-AFEAVL  107 (246)
T ss_dssp             CCSCCEEEEETCTT-CHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCT---TSC-----CSCTT-CEEEEE
T ss_pred             cCCCCEEEEECCCC-chhcccccc-cce-EEEEeecccccccccccccccccccccc---ccc-----ccccc-ccccee
Confidence            55778999999984 888888876 588 9999999999999998877655544332   111     12223 799998


Q ss_pred             EcCC-------ChHHHHHHHHhhccCCeEEEEE
Q 019822          228 ECTG-------VPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       228 d~~g-------~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ....       -...+..+.+.|.++ |.++..
T Consensus       108 ~~~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         108 ALGDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             ECSSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eecchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            6432       224577888999997 988754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.68  E-value=0.01  Score=49.49  Aligned_cols=104  Identities=23%  Similarity=0.257  Sum_probs=67.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHH----HHhcCCceE---eCCCCCCchhHHHHHHhhh-
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKEK----GKAFGMTDF---INPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~-~~~~~----~~~lga~~v---~~~~~~~~~~~~~~i~~~~-  218 (335)
                      -+|+++||+|+ +++|.+.++.+...|+ +|+.++++. +..+.    +++.+.+..   .|-.+  +.+..+.+++.. 
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~--~~~v~~~~~~~~~   92 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV--VEDIVRMFEEAVK   92 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCC--HHHHHHHHHHHHH
Confidence            35799999987 9999999999999999 998887653 43333    345554332   23222  234444444332 


Q ss_pred             -CCCCccEEEEcCCChH-------------------------HHHHHHHhhccCCeEEEEEccCC
Q 019822          219 -HGMGVDYCFECTGVPS-------------------------LLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       219 -~g~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                       .| ++|+++++.+...                         ..+.+++.+... |+++.++...
T Consensus        93 ~~g-~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~~  155 (272)
T d1g0oa_          93 IFG-KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSIT  155 (272)
T ss_dssp             HHS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCGG
T ss_pred             HhC-CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-cccccccccc
Confidence             13 6899999877411                         345666777887 8888876443

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.011  Score=44.99  Aligned_cols=110  Identities=22%  Similarity=0.265  Sum_probs=73.5

Q ss_pred             hHHHHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhh
Q 019822          139 YGAAWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       139 ~~~l~~~~~-~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      +.++.+..+ .-.|++++|+|-|-+|...++.++.+|+ +|++++.++-+.-.+.--|.. +.        .+.+.+   
T Consensus        11 ~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~--------~~~~a~---   77 (163)
T d1li4a1          11 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VT--------TMDEAC---   77 (163)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC--------CHHHHT---
T ss_pred             HHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-ee--------ehhhhh---
Confidence            334445444 4589999999999999999999999999 999999988664444434432 21        122221   


Q ss_pred             hCCCCccEEEEcCCChHHH-HHHHHhhccCCeEEEEEccCCCccccchhHHH
Q 019822          218 THGMGVDYCFECTGVPSLL-SEALETTKVGKGKVIVIGVGVDAMVPLNVIAL  268 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~  268 (335)
                         ...|+++-++|+...+ .+-++.++++ ..+.-+|..   ..+++...+
T Consensus        78 ---~~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Ghf---d~EId~~~L  122 (163)
T d1li4a1          78 ---QEGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGHF---DVEIDVKWL  122 (163)
T ss_dssp             ---TTCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSSS---TTSBCHHHH
T ss_pred             ---hhccEEEecCCCccchhHHHHHhccCC-eEEEEeccc---cceecHHHH
Confidence               1479999999986433 5778888886 444444433   344554444

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.64  E-value=0.00049  Score=56.61  Aligned_cols=101  Identities=21%  Similarity=0.256  Sum_probs=62.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCC---chhHHHHHHhhhCCCCccEE
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP---NKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~---~~~~~~~i~~~~~g~g~d~v  226 (335)
                      ..+|||+|+ +++|.+.++.+...|+ +|+.+++++++...     ....+..+...   .....+.+.......++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            357899987 9999999999999999 99999987654221     11111111100   01112222332333379999


Q ss_pred             EEcCCC----h-------H---------------HHHHHHHhhccCCeEEEEEccCCC
Q 019822          227 FECTGV----P-------S---------------LLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       227 id~~g~----~-------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      +++.|.    .       +               ..+.++..+.++ |+++.++....
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~~~  132 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAAAA  132 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccHHh
Confidence            998873    0       0               223445667786 99999986554

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.63  E-value=0.0032  Score=52.74  Aligned_cols=79  Identities=13%  Similarity=0.192  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC--ce----EeCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM--TD----FINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga--~~----v~~~~~~~~~~~~~~i~~~~  218 (335)
                      +++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.+.  ..    ..|-.+  +.+..+.+++..
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~~~   80 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT--EDGQDQIINSTL   80 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC--HHHHHHHHHHHH
Confidence            5789999987 9999999999999999 999999999887665    23332  11    234333  123333333221


Q ss_pred             --CCCCccEEEEcCCC
Q 019822          219 --HGMGVDYCFECTGV  232 (335)
Q Consensus       219 --~g~g~d~vid~~g~  232 (335)
                        .| ++|+++++.|.
T Consensus        81 ~~~g-~iDilvnnAG~   95 (272)
T d1xkqa_          81 KQFG-KIDVLVNNAGA   95 (272)
T ss_dssp             HHHS-CCCEEEECCCC
T ss_pred             HHhC-CceEEEeCCcc
Confidence              13 69999998764

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.62  E-value=0.0046  Score=50.32  Aligned_cols=101  Identities=18%  Similarity=0.202  Sum_probs=69.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~  215 (335)
                      +.+.+.++|+++||=+|+|+ |..+..+++. +. +|++++.|++..+.+++    .+.+.  .+..+.   .++     
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~---~~~-----   76 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA---ESL-----   76 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT---TBC-----
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccc---ccc-----
Confidence            56889999999999999875 7788888874 56 99999999987776643    33321  121111   000     


Q ss_pred             hhhCCCCccEEEEcCCC------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          216 GITHGMGVDYCFECTGV------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .+.++ .||+|+..-.-      ...++.+.+.|+++ |+++....
T Consensus        77 ~~~~~-~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~~  120 (234)
T d1xxla_          77 PFPDD-SFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVDH  120 (234)
T ss_dssp             CSCTT-CEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccc-ccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEEc
Confidence            11233 79999864331      24678999999998 99887643

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.0077  Score=51.01  Aligned_cols=81  Identities=15%  Similarity=0.204  Sum_probs=54.6

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-Hhc--------CCce---EeCCCCCCchhHHHHH
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAF--------GMTD---FINPDDEPNKSISELV  214 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~l--------ga~~---v~~~~~~~~~~~~~~i  214 (335)
                      .-+|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+ +++        +...   ..|-.+  +.+..+.+
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~   85 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN--EEEVNNLV   85 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC--HHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC--HHHHHHHH
Confidence            457899999987 9999999999999999 999999998876654 222        2221   123332  23333333


Q ss_pred             Hhhh--CCCCccEEEEcCCC
Q 019822          215 KGIT--HGMGVDYCFECTGV  232 (335)
Q Consensus       215 ~~~~--~g~g~d~vid~~g~  232 (335)
                      ++..  .| ++|+++++.|.
T Consensus        86 ~~~~~~~G-~iDiLVnnAg~  104 (297)
T d1yxma1          86 KSTLDTFG-KINFLVNNGGG  104 (297)
T ss_dssp             HHHHHHHS-CCCEEEECCCC
T ss_pred             HHHHHHhC-CeEEEEeeccc
Confidence            3322  13 69999998874

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.58  E-value=0.0053  Score=51.06  Aligned_cols=79  Identities=15%  Similarity=0.195  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc----e--EeCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT----D--FINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~----~--v~~~~~~~~~~~~~~i~~~~  218 (335)
                      +++.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+..    .  ..|-.+  ..+..+.+++..
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~--~~~v~~~~~~~~   80 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT--DAGQDEILSTTL   80 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC--HHHHHHHHHHHH
Confidence            6788999987 9999999999999999 999999999887664    233321    1  224333  133333333321


Q ss_pred             --CCCCccEEEEcCCC
Q 019822          219 --HGMGVDYCFECTGV  232 (335)
Q Consensus       219 --~g~g~d~vid~~g~  232 (335)
                        -| ++|+++++.|.
T Consensus        81 ~~~g-~iDilvnnAG~   95 (264)
T d1spxa_          81 GKFG-KLDILVNNAGA   95 (264)
T ss_dssp             HHHS-CCCEEEECCC-
T ss_pred             HHhC-CCCEeeccccc
Confidence              13 69999998773

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.0064  Score=50.81  Aligned_cols=101  Identities=22%  Similarity=0.352  Sum_probs=63.5

Q ss_pred             CCCEE-EEEcC-CHHHHHHHH-HHHHcCCCEEEEEcCChhhHHHH----HhcCCc-e--EeCCCCCCchh---HHHHHHh
Q 019822          150 KGSSV-AVLGL-GTVGLGAVD-GARMHGAAKIIGIDKNPWKKEKG----KAFGMT-D--FINPDDEPNKS---ISELVKG  216 (335)
Q Consensus       150 ~~~~V-lI~G~-g~vG~~ai~-la~~~G~~~V~~~~~~~~~~~~~----~~lga~-~--v~~~~~~~~~~---~~~~i~~  216 (335)
                      .|++| ||+|+ +++|+++++ |++.-|+ +|+.+++++++.+.+    ++.+.. .  ..|-.+  ..+   +.+.+.+
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~--~~sv~~~~~~~~~   77 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD--LQSIRALRDFLRK   77 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC--HHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC--HHHHHHHHHHHHH
Confidence            36677 66687 999999876 4555688 999999999887654    333422 1  234333  122   2333333


Q ss_pred             hhCCCCccEEEEcCCCh-------------------------HHHHHHHHhhccCCeEEEEEccC
Q 019822          217 ITHGMGVDYCFECTGVP-------------------------SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .. + ++|++|++.|..                         ...+.+++.+++. |+++.++..
T Consensus        78 ~~-g-~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS~  139 (275)
T d1wmaa1          78 EY-G-GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSSI  139 (275)
T ss_dssp             HH-S-SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCH
T ss_pred             hc-C-CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCccccccc
Confidence            33 3 699999988741                         0233445666776 999888754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.55  E-value=0.0025  Score=53.05  Aligned_cols=79  Identities=18%  Similarity=0.261  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-----HhcCCce---EeCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-----KAFGMTD---FINPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-----~~lga~~---v~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+     ++.|.+.   ..|-.+  +.+..+.+++..  
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN--TDIVTKTIQQIDAD   84 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC--HHHHHHHHHHHHHH
Confidence            5789999987 9999999999999999 999999988766443     3445332   233333  233333333322  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -| ++|+++++.|.
T Consensus        85 ~g-~iDilVnnAg~   97 (260)
T d1h5qa_          85 LG-PISGLIANAGV   97 (260)
T ss_dssp             SC-SEEEEEECCCC
T ss_pred             hC-CCcEecccccc
Confidence            23 69999998863

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.53  E-value=0.0067  Score=50.04  Aligned_cols=167  Identities=17%  Similarity=0.156  Sum_probs=94.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh--C
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT--H  219 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~--~  219 (335)
                      .++.+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|-.+  +.+..+.+++..  .
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK--KEEISEVINKILTEH   85 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC--HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence            4788899987 9999999999989999 999999998887654    3445322   223332  233333333321  2


Q ss_pred             CCCccEEEEcCCChH-------------------------HHHHHHHhh--ccCCeEEEEEccCCC-cc-ccchhH----
Q 019822          220 GMGVDYCFECTGVPS-------------------------LLSEALETT--KVGKGKVIVIGVGVD-AM-VPLNVI----  266 (335)
Q Consensus       220 g~g~d~vid~~g~~~-------------------------~~~~~~~~l--~~~~G~~v~~g~~~~-~~-~~~~~~----  266 (335)
                      | ++|+++++.|...                         ..+.+++.+  ... |++|.++...+ .. ......    
T Consensus        86 g-~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~IVnisS~~~~~~~~~~~~Y~asK  163 (251)
T d2c07a1          86 K-NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRY-GRIINISSIVGLTGNVGQANYSSSK  163 (251)
T ss_dssp             S-CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTC-EEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             C-CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCC-eEEEEECCHHhcCCCCCCHHHHHHH
Confidence            3 7999999877411                         223344444  343 99999986554 11 111111    


Q ss_pred             ------------HHhhcCcEEEEeeccCCCC---cCcHHHHHHHHhCCCCCCCCceeEEeechhHHHHHHHhcCC
Q 019822          267 ------------ALACGGRTLKGTTFGGIKT---KSDLPTLLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQP  326 (335)
Q Consensus       267 ------------~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~ea~~~~~~~  326 (335)
                                  ++...++++.....|...+   ....++..+.+.+. .++.+    .-.-+|+.++...+.+.
T Consensus       164 aal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~-~pl~R----~~~pedvA~~v~fL~S~  233 (251)
T d2c07a1         164 AGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISN-IPAGR----MGTPEEVANLACFLSSD  233 (251)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTT-CTTSS----CBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhc-CCCCC----CcCHHHHHHHHHHHhCc
Confidence                        1223456666555544322   12233444444333 22322    22457888888877653

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.52  E-value=0.0059  Score=50.29  Aligned_cols=79  Identities=16%  Similarity=0.199  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH--HHHHhcCCce---EeCCCCCCchhHHHHHHhhh--CCC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK--EKGKAFGMTD---FINPDDEPNKSISELVKGIT--HGM  221 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~--~~~~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~  221 (335)
                      +++.+||+|+ +++|.+.++.+...|+ +|+.+++++++.  +.++++|...   ..|-.+  +.+..+.+++..  -| 
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~--~~~v~~~~~~~~~~~G-   79 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ--PGDVEAFGKQVISTFG-   79 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC--HHHHHHHHHHHHHHHS-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC--HHHHHHHHHHHHHHcC-
Confidence            5789999987 9999999999999999 999999876433  3346676432   234333  233333333322  13 


Q ss_pred             CccEEEEcCCC
Q 019822          222 GVDYCFECTGV  232 (335)
Q Consensus       222 g~d~vid~~g~  232 (335)
                      ++|+++++.|.
T Consensus        80 ~iDilVnnAG~   90 (247)
T d2ew8a1          80 RCDILVNNAGI   90 (247)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999998874

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.52  E-value=0.0057  Score=47.34  Aligned_cols=71  Identities=17%  Similarity=0.155  Sum_probs=49.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcC---CceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFG---MTDFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lg---a~~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      ..++++|+|+|+|+.+.+++..+...+. +|+++.|+.++.+.+ +.+.   ....+..+.            . .-..+
T Consensus        15 ~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~------------~-~~~~~   80 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMDS------------I-PLQTY   80 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------C-CCSCC
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhhhcc------------c-ccccc
Confidence            4578899999999999998888776554 999999999887765 3332   111221111            1 11378


Q ss_pred             cEEEEcCCC
Q 019822          224 DYCFECTGV  232 (335)
Q Consensus       224 d~vid~~g~  232 (335)
                      |++|+|++.
T Consensus        81 diiIN~tp~   89 (171)
T d1p77a1          81 DLVINATSA   89 (171)
T ss_dssp             SEEEECCCC
T ss_pred             ceeeecccc
Confidence            999999875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.50  E-value=0.0036  Score=52.13  Aligned_cols=79  Identities=16%  Similarity=0.178  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hHH----HHHhcCCceE---eCCCCCCchhHHHHHHhhh--
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW-KKE----KGKAFGMTDF---INPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~-~~~----~~~~lga~~v---~~~~~~~~~~~~~~i~~~~--  218 (335)
                      +++++||+|+ +++|.+.++.+...|+ +|+.++++.+ +.+    .+++.|.+..   .|-.+  +.+..+.+++..  
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~~~   82 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV--ESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS--HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence            6789999986 9999999999999999 9999998754 333    3345564322   23332  133333333221  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      .| ++|+++++.|.
T Consensus        83 ~G-~iDiLVnnAG~   95 (261)
T d1geea_          83 FG-KLDVMINNAGL   95 (261)
T ss_dssp             HS-CCCEEEECCCC
T ss_pred             hC-CCCEeecccee
Confidence            13 69999998875

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0068  Score=50.53  Aligned_cols=42  Identities=19%  Similarity=0.166  Sum_probs=38.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      -+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~   54 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKV   54 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            46899999987 9999999999999999 999999999988775

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.46  E-value=0.0097  Score=49.10  Aligned_cols=84  Identities=20%  Similarity=0.252  Sum_probs=54.1

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-------HHHHHhcCCceE---eCCCCCCchhHHHHHH
Q 019822          147 KVEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK-------KEKGKAFGMTDF---INPDDEPNKSISELVK  215 (335)
Q Consensus       147 ~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~-------~~~~~~lga~~v---~~~~~~~~~~~~~~i~  215 (335)
                      .++|+.++||+|+ +++|++.++.+...|+++|+.+.+++.+       .+.+++.|....   .|-.+  .....+.+.
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d--~~~~~~~~~   82 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD--RESVRELLG   82 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC--HHHHHHHHH
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccch--HHHHHHhhc
Confidence            4688999999986 9999999998888898667777765322       223345665322   23333  233333334


Q ss_pred             hhhCCCCccEEEEcCCC
Q 019822          216 GITHGMGVDYCFECTGV  232 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~  232 (335)
                      ++....++|.++++.|.
T Consensus        83 ~i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          83 GIGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             TSCTTSCEEEEEECCCC
T ss_pred             ccccccccccccccccc
Confidence            44333368999988874

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.46  E-value=0.0081  Score=49.58  Aligned_cols=80  Identities=19%  Similarity=0.343  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHH---HhhhC
Q 019822          150 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELV---KGITH  219 (335)
Q Consensus       150 ~~~~VlI~G~-g--~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i---~~~~~  219 (335)
                      +++++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++    +.+....+..+-.++.+..+.+   .+.. 
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc-
Confidence            6889999997 5  799999999999999 9999998876554442    3343333322221123332222   2323 


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      | ++|+++++.+.
T Consensus        85 g-~iDilVnnag~   96 (256)
T d1ulua_          85 G-GLDYLVHAIAF   96 (256)
T ss_dssp             S-SEEEEEECCCC
T ss_pred             C-CceEEEecccc
Confidence            3 69999998763

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.46  E-value=0.00088  Score=56.54  Aligned_cols=101  Identities=15%  Similarity=0.132  Sum_probs=69.3

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i  214 (335)
                      |.....+.++.+||=+|+|. |..+..+++..|+ +|++++.++...+.+++    .|..   .++..+.          
T Consensus        59 l~~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~----------  126 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF----------  126 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT----------
T ss_pred             HHHhcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc----------
Confidence            34556789999999999874 7778888888898 99999999988777644    3322   1222221          


Q ss_pred             Hhhh-CCCCccEEEEcCC-----C-hHHHHHHHHhhccCCeEEEEEcc
Q 019822          215 KGIT-HGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       215 ~~~~-~g~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .++. ....||+|+..-.     . ...+..+.+.|+++ |+++....
T Consensus       127 ~~l~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         127 LEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             TSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            1111 2237999985322     1 24678999999998 99887654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.45  E-value=0.024  Score=43.14  Aligned_cols=90  Identities=18%  Similarity=0.144  Sum_probs=61.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      ++|-++|.|.+|...+.-+...|+ +|.+.++++++.+.+.+.++...        .+..+.+      +..|+++-|+.
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~--------~~~~e~~------~~~diii~~v~   66 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAA--------RSARDAV------QGADVVISMLP   66 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEEC--------SSHHHHH------TSCSEEEECCS
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcccc--------chhhhhc------cccCeeeeccc
Confidence            368899999999988887777899 99999999999999888875422        1122222      14688888887


Q ss_pred             ChHHHHHH-------HHhhccCCeEEEEEccCC
Q 019822          232 VPSLLSEA-------LETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       232 ~~~~~~~~-------~~~l~~~~G~~v~~g~~~  257 (335)
                      ........       ...+.++ -.++.++...
T Consensus        67 ~~~~~~~v~~~~~~~~~~l~~g-~iiid~st~~   98 (162)
T d3cuma2          67 ASQHVEGLYLDDDGLLAHIAPG-TLVLECSTIA   98 (162)
T ss_dssp             CHHHHHHHHHSTTCHHHHSCTT-CEEEECSCCC
T ss_pred             chhhHHHHHhccccccccCCCC-CEEEECCCCC
Confidence            66554443       2335554 5666665544

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.42  E-value=0.0047  Score=51.04  Aligned_cols=75  Identities=17%  Similarity=0.130  Sum_probs=52.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC----CceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG----MTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg----a~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .++||+|+ +++|++.++.+...|+ +|+.++++.++.+.+++.+    ...+.+..+  ...+.+.+.+..+  ++|++
T Consensus         1 ~TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~--~~~~~~~~~~~~G--~iDiL   75 (252)
T d1zmta1           1 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE--PAELIEAVTSAYG--QVDVL   75 (252)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS--HHHHHHHHHHHHS--CCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHH--HHHHHHHHHHHcC--CCCEE
Confidence            36889987 8999999999999999 9999999888877765432    233444433  2334444444443  69999


Q ss_pred             EEcCC
Q 019822          227 FECTG  231 (335)
Q Consensus       227 id~~g  231 (335)
                      +++.|
T Consensus        76 VnNAg   80 (252)
T d1zmta1          76 VSNDI   80 (252)
T ss_dssp             EEECC
T ss_pred             EECCc
Confidence            98765

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.42  E-value=0.0039  Score=51.63  Aligned_cols=104  Identities=13%  Similarity=0.043  Sum_probs=63.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce----EeCCCCCCchhH---HHHHHhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD----FINPDDEPNKSI---SELVKGI  217 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~----v~~~~~~~~~~~---~~~i~~~  217 (335)
                      ++++|||+|+ +++|.+++..+...|+ +|+++.++.++.+.+++    .+...    ..|-.. +....   .+.+.+.
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTV-PVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS-CHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCC-CHHHHHHHHHHHHHH
Confidence            5899999987 8999999999999999 88777766665544432    22212    222221 01223   3333333


Q ss_pred             hCCCCccEEEEcCCChH-----------------HHHHHHHhhc-----cCCeEEEEEccCCC
Q 019822          218 THGMGVDYCFECTGVPS-----------------LLSEALETTK-----VGKGKVIVIGVGVD  258 (335)
Q Consensus       218 ~~g~g~d~vid~~g~~~-----------------~~~~~~~~l~-----~~~G~~v~~g~~~~  258 (335)
                      . | ++|+++++.|...                 ..+.+++.+.     .+ |+++.++...+
T Consensus        82 ~-g-~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~-g~Ii~isS~~~  141 (254)
T d1sbya1          82 L-K-TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPG-GIIANICSVTG  141 (254)
T ss_dssp             H-S-CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCGGG
T ss_pred             c-C-CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCC-ceEEEEechhh
Confidence            3 3 6999999988521                 2233444442     24 88988875554

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0016  Score=56.07  Aligned_cols=106  Identities=18%  Similarity=0.146  Sum_probs=69.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cC-----------CceE--eCCC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FG-----------MTDF--INPD  203 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lg-----------a~~v--~~~~  203 (335)
                      +...++++||++||=.|+|+ |.+++.||+..|. .+|+.++.+++..+.+++    ++           .+.+  ...+
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            55778999999999999875 8899999999875 389999999988777643    11           1111  1111


Q ss_pred             CCCchhHHHHHHhhhCCCCccEEEEcCCC-hHHHHHHHHhhccCCeEEEEEccC
Q 019822          204 DEPNKSISELVKGITHGMGVDYCFECTGV-PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       204 ~~~~~~~~~~i~~~~~g~g~d~vid~~g~-~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      -   .++...   +. ...+|.||--... ...+..+.+.|+++ |+++.+...
T Consensus       169 i---~~~~~~---~~-~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~P~  214 (324)
T d2b25a1         169 I---SGATED---IK-SLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVVN  214 (324)
T ss_dssp             T---TCCC-----------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEESS
T ss_pred             h---hhcccc---cC-CCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEeCC
Confidence            1   111111   11 2268887732333 24788999999998 999987543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.38  E-value=0.00042  Score=57.19  Aligned_cols=74  Identities=16%  Similarity=0.167  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHH---HhhhCCCCccE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELV---KGITHGMGVDY  225 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i---~~~~~g~g~d~  225 (335)
                      +++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+..    ...|-.+  +.+..+.+   .+.. | ++|+
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~~--~~~v~~~~~~~~~~~-g-~iDi   76 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVTD--SDAVDRAFTAVEEHQ-G-PVEV   76 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTTC--HHHHHHHHHHHHHHH-S-SCSE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecCC--HHHHHHHHHHHHHhc-C-CceE
Confidence            6789999987 8999999999999999 99999998766543211    1233332  12233323   3332 3 6999


Q ss_pred             EEEcCCC
Q 019822          226 CFECTGV  232 (335)
Q Consensus       226 vid~~g~  232 (335)
                      ++++.|.
T Consensus        77 LVnnAG~   83 (237)
T d1uzma1          77 LVSNAGL   83 (237)
T ss_dssp             EEEECSC
T ss_pred             EEeeecc
Confidence            9998874

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.38  E-value=0.013  Score=48.37  Aligned_cols=76  Identities=18%  Similarity=0.153  Sum_probs=51.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh--CCCC
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT--HGMG  222 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~g  222 (335)
                      .+||+|+ +++|++.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|-.+  +.+..+.+++..  -| +
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g-~   78 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD--RDQVFAAVEQARKTLG-G   78 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHHHTT-C
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHHhC-C
Confidence            4688887 9999999999888999 999999999887654    3445332   234333  233333333322  13 6


Q ss_pred             ccEEEEcCCC
Q 019822          223 VDYCFECTGV  232 (335)
Q Consensus       223 ~d~vid~~g~  232 (335)
                      +|+++++.|.
T Consensus        79 iDilVnnAG~   88 (255)
T d1gega_          79 FDVIVNNAGV   88 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             ccEEEecccc
Confidence            9999998874

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.38  E-value=0.0024  Score=44.12  Aligned_cols=70  Identities=20%  Similarity=0.273  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      ++++|+|+|.|..|+++++++...|+ +|++.+.+..  ..+.+++ +....+....   ..   .+.      ++|.++
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~~~~~~~~~~-~~~~~~~~~~---~~---~~~------~~d~vi   69 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMTPPGLDKLPE-AVERHTGSLN---DE---WLM------AADLIV   69 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSSCTTGGGSCT-TSCEEESBCC---HH---HHH------HCSEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcCchhHHHHhh-ccceeecccc---hh---hhc------cCCEEE
Confidence            57889999999999999999999999 9999996443  2222222 2222333332   11   121      578888


Q ss_pred             EcCCCh
Q 019822          228 ECTGVP  233 (335)
Q Consensus       228 d~~g~~  233 (335)
                      -+.|-+
T Consensus        70 ~SPGi~   75 (93)
T d2jfga1          70 ASPGIA   75 (93)
T ss_dssp             ECTTSC
T ss_pred             ECCCCC
Confidence            877755

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.33  E-value=0.0069  Score=47.43  Aligned_cols=100  Identities=20%  Similarity=0.234  Sum_probs=66.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCC-ce--EeCCCCCCchhHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGM-TD--FINPDDEPNKSISELV  214 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga-~~--v~~~~~~~~~~~~~~i  214 (335)
                      +....+++++++||=+|+|. |..++.+|+. +. +|++++.+++..+.++    ++|. +.  ++..      +..+..
T Consensus        25 il~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g------da~~~~   95 (186)
T d1l3ia_          25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG------DAPEAL   95 (186)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES------CHHHHH
T ss_pred             HHHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC------chhhcc
Confidence            34567899999999998763 5566677764 45 9999999998877764    4553 22  2222      222222


Q ss_pred             HhhhCCCCccEEEEcCCC---hHHHHHHHHhhccCCeEEEEEc
Q 019822          215 KGITHGMGVDYCFECTGV---PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                         .....+|.|+-.-..   ...++.+.+.|+++ |+++...
T Consensus        96 ---~~~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  134 (186)
T d1l3ia_          96 ---CKIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (186)
T ss_dssp             ---TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             ---cccCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence               233479998854332   34677888899997 9987654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.31  E-value=0.024  Score=42.60  Aligned_cols=81  Identities=16%  Similarity=0.210  Sum_probs=55.5

Q ss_pred             EEEEEcCCHHHHHHHH-HHHHcCCCEEEEEcCChhhHHHHH-hcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          153 SVAVLGLGTVGLGAVD-GARMHGAAKIIGIDKNPWKKEKGK-AFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~-la~~~G~~~V~~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      +|.++|+|.+|.+.++ |.+.-+. +|++.++++++.+.++ ++|.. +.+..+           +.   ...|+||-|+
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~-~i~v~~r~~~~~~~l~~~~~~~-~~~~~~-----------~v---~~~Div~lav   65 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGY-RIYIANRGAEKRERLEKELGVE-TSATLP-----------EL---HSDDVLILAV   65 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHHHHHTCCE-EESSCC-----------CC---CTTSEEEECS
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCC-cEEEEeCChhHHHHhhhhcccc-cccccc-----------cc---cccceEEEec
Confidence            5788999999998877 4554335 9999999999988875 46654 333222           01   1469999888


Q ss_pred             CChHHHHHHHHhhccCCeEEE
Q 019822          231 GVPSLLSEALETTKVGKGKVI  251 (335)
Q Consensus       231 g~~~~~~~~~~~l~~~~G~~v  251 (335)
                      - +..+...++.+.+. +.++
T Consensus        66 k-P~~~~~v~~~l~~~-~~~v   84 (152)
T d1yqga2          66 K-PQDMEAACKNIRTN-GALV   84 (152)
T ss_dssp             C-HHHHHHHHTTCCCT-TCEE
T ss_pred             C-HHHHHHhHHHHhhc-ccEE
Confidence            6 44567777777664 5443

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.30  E-value=0.0021  Score=52.35  Aligned_cols=98  Identities=15%  Similarity=0.137  Sum_probs=65.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc---eEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT---DFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~---~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      ..+|.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++....   .+....    .+.......+..+ .||
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~fD  123 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK----GLWEDVAPTLPDG-HFD  123 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE----SCHHHHGGGSCTT-CEE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc----ccccccccccccc-ccc
Confidence            36788999999874 7788888887666 899999999998888664321   111111    2233333344444 799


Q ss_pred             EEE-EcCCC----------hHHHHHHHHhhccCCeEEEEE
Q 019822          225 YCF-ECTGV----------PSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       225 ~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .++ |++..          ...+..+.+.|+++ |+++..
T Consensus       124 ~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~  162 (229)
T d1zx0a1         124 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC  162 (229)
T ss_dssp             EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred             ceeecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence            885 65533          12456788899998 998764

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.29  E-value=0.014  Score=47.62  Aligned_cols=97  Identities=24%  Similarity=0.300  Sum_probs=66.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc-eEeCCCCCCchhHHHHHHh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT-DFINPDDEPNKSISELVKG  216 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~i~~  216 (335)
                      ++......+.++||=+|+|+ |..+..+++ .|+ +|++++.+++-.+.+++.    +.. .++..+          +.+
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d----------~~~   99 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGD----------VLE   99 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESC----------GGG
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehh----------hhh
Confidence            45556677888999999975 888887777 588 999999999888877543    321 222222          222


Q ss_pred             hhCCCCccEEEEcCCC---------hHHHHHHHHhhccCCeEEEE
Q 019822          217 ITHGMGVDYCFECTGV---------PSLLSEALETTKVGKGKVIV  252 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~---------~~~~~~~~~~l~~~~G~~v~  252 (335)
                      +.-...+|+|+...+.         ...++.+.+.|+++ |+++.
T Consensus       100 l~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         100 IAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             cccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            3323479999865332         13577889999998 98865

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.28  E-value=0.0078  Score=49.81  Aligned_cols=101  Identities=18%  Similarity=0.292  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHHH----HHhcCCceE---eCCCCCCchhHHHHH---Hh
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGID-KNPWKKEK----GKAFGMTDF---INPDDEPNKSISELV---KG  216 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~-~~~~~~~~----~~~lga~~v---~~~~~~~~~~~~~~i---~~  216 (335)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+.+. ++++..+.    +++.|.+..   .|-.+  ..+....+   .+
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~--~~~v~~~~~~~~~   80 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK--PSEVVALFDKAVS   80 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS--HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCC--HHHHHHHHHHHHH
Confidence            46899999987 9999999999999999 888764 44444433    345664332   23222  12232323   33


Q ss_pred             hhCCCCccEEEEcCCChH-------------------------HHHHHHHhhccCCeEEEEEcc
Q 019822          217 ITHGMGVDYCFECTGVPS-------------------------LLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .. | ++|+++++.|...                         ..+.++..+... |.++.+..
T Consensus        81 ~~-g-~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s  141 (259)
T d1ja9a_          81 HF-G-GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS  141 (259)
T ss_dssp             HH-S-CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             Hc-C-CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence            33 3 6999999887511                         345666777776 77777654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.24  E-value=0.0055  Score=44.21  Aligned_cols=68  Identities=7%  Similarity=0.166  Sum_probs=49.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      ..++..++|+|+|+|.+|.-++..++.+|. +|..+.+.+.            ++...+   ++..+.+++....+|+++
T Consensus        17 ~~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~~------------il~~~d---~~~~~~~~~~l~~~gV~i   80 (117)
T d1onfa2          17 FNIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGNR------------ILRKFD---ESVINVLENDMKKNNINI   80 (117)
T ss_dssp             TTCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSS------------SCTTSC---HHHHHHHHHHHHHTTCEE
T ss_pred             hccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhcc------------cccccc---HHHHHHHHHHHHhCCCEE
Confidence            345557899999999999999999999999 9999997531            222222   556666666555557777


Q ss_pred             EEEc
Q 019822          226 CFEC  229 (335)
Q Consensus       226 vid~  229 (335)
                      ..++
T Consensus        81 ~~~~   84 (117)
T d1onfa2          81 VTFA   84 (117)
T ss_dssp             ECSC
T ss_pred             EECC
Confidence            7654

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.24  E-value=0.012  Score=48.58  Aligned_cols=104  Identities=23%  Similarity=0.287  Sum_probs=65.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHH-----HhcCCceE---eCCCCCCchhHHHHHH---h
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP-WKKEKG-----KAFGMTDF---INPDDEPNKSISELVK---G  216 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~-~~~~~~-----~~lga~~v---~~~~~~~~~~~~~~i~---~  216 (335)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++ ++.+.+     ++.|....   .|-.+  +.+..+.++   +
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~   79 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK--GEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS--HHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCC--HHHHHHHHHHHHH
Confidence            6789999987 9999999999999999 999999864 444332     23343322   23322  222333332   2


Q ss_pred             hhCCCCccEEEEcCCChH-------------------------HHHHHHHhhccC-CeEEEEEccCCC
Q 019822          217 ITHGMGVDYCFECTGVPS-------------------------LLSEALETTKVG-KGKVIVIGVGVD  258 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~-~G~~v~~g~~~~  258 (335)
                      .. | ++|+++++.|...                         ..+.+++.+... +|+++.++...+
T Consensus        80 ~~-G-~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  145 (260)
T d1x1ta1          80 QM-G-RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG  145 (260)
T ss_dssp             HH-S-CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             Hh-C-CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccc
Confidence            22 3 6999999887410                         223445555432 389998876554

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.18  E-value=0.0097  Score=47.92  Aligned_cols=101  Identities=19%  Similarity=0.184  Sum_probs=68.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~  215 (335)
                      +.+.++++++++||=+|+| .|..+..+++. |. +|++++.+++-.+.+++    .+...  .+..+.   .+    + 
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~---~~----l-   75 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQ----M-   75 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----C----C-
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccc---cc----c-
Confidence            5678899999999999987 47777777754 67 99999999987776643    44332  221211   11    0 


Q ss_pred             hhhCCCCccEEEEcCC-----C-hHHHHHHHHhhccCCeEEEEEcc
Q 019822          216 GITHGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .+..+ .||+|+..-.     . ...+..+.+.|+++ |+++....
T Consensus        76 ~~~~~-~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~~  119 (231)
T d1vl5a_          76 PFTDE-RFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVDN  119 (231)
T ss_dssp             CSCTT-CEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccc-ccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            11223 7999985432     2 24678999999998 99987643

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.17  E-value=0.016  Score=49.10  Aligned_cols=105  Identities=22%  Similarity=0.238  Sum_probs=65.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh---------hhHHH----HHhcCCceEeCCCCCCchhHHHHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP---------WKKEK----GKAFGMTDFINPDDEPNKSISELVK  215 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~---------~~~~~----~~~lga~~v~~~~~~~~~~~~~~i~  215 (335)
                      +|+++||+|+ +++|.+.++.+...|+ +|++.+++.         +..+.    +...+.....+..+  ..+..+.++
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~v~   82 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS--VEAGEKLVK   82 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC--GGGHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch--HHHHHHHHH
Confidence            5889999987 9999999999999999 999986543         22222    22334444444433  123333333


Q ss_pred             hhh--CCCCccEEEEcCCChH-------------------------HHHHHHHhhcc-CCeEEEEEccCCC
Q 019822          216 GIT--HGMGVDYCFECTGVPS-------------------------LLSEALETTKV-GKGKVIVIGVGVD  258 (335)
Q Consensus       216 ~~~--~g~g~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~~~  258 (335)
                      +..  -| ++|++|++.|...                         ..+.+++.+.. ++|++|.++...+
T Consensus        83 ~~~~~~G-~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~  152 (302)
T d1gz6a_          83 TALDTFG-RIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  152 (302)
T ss_dssp             HHHHHTS-CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHHHHcC-CCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence            221  23 6999999887410                         33445555532 2389999986544

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.10  E-value=0.0094  Score=50.22  Aligned_cols=97  Identities=15%  Similarity=0.134  Sum_probs=67.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC---------C-ceEeCCCCCCchhHHHHHHhhh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG---------M-TDFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg---------a-~~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ...++|||+|+|. |..+-.++++.+.++|.+++.+++-.+.++++-         . -.++.      .|-.+.+++..
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~------~Da~~~l~~~~  151 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI------GDGVAFLKNAA  151 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE------SCHHHHHHTSC
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE------ccHHHHHhhcc
Confidence            4567999998754 556667888777769999999999888887642         1 11221      23445555544


Q ss_pred             CCCCccEEE-EcCC---------ChHHHHHHHHhhccCCeEEEEEc
Q 019822          219 HGMGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       219 ~g~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      . +.+|+|| |+..         +.+.++.+.+.|+++ |.++.-.
T Consensus       152 ~-~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  195 (290)
T d1xj5a_         152 E-GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQA  195 (290)
T ss_dssp             T-TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             c-cCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEec
Confidence            3 3799887 6553         234678999999998 9888764

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.04  E-value=0.036  Score=41.93  Aligned_cols=95  Identities=17%  Similarity=0.215  Sum_probs=58.1

Q ss_pred             CEEEEEcCCHHHH-HHHHHHHHcCCCEEEEEc-CChh--hHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          152 SSVAVLGLGTVGL-GAVDGARMHGAAKIIGID-KNPW--KKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       152 ~~VlI~G~g~vG~-~ai~la~~~G~~~V~~~~-~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      -+|.|+|+|.+|. ..+++++.....+++++. ++.+  ...+++++|.....        ...+.+.+...-.++|+||
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--------~~~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--------AGVEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--------SHHHHHHHSGGGGGEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--------cceeeeeecccccccCEEE
Confidence            4789999999987 567888766543777765 3433  35667888865321        1223343333334799999


Q ss_pred             EcCCChHHHHHH--HHhhccCCeEEEEEcc
Q 019822          228 ECTGVPSLLSEA--LETTKVGKGKVIVIGV  255 (335)
Q Consensus       228 d~~g~~~~~~~~--~~~l~~~~G~~v~~g~  255 (335)
                      ++++........  .+.+..+ -++++...
T Consensus        77 ~ATpag~h~~~~~~~~aa~~G-~~VID~s~  105 (157)
T d1nvmb1          77 DATSASAHVQNEALLRQAKPG-IRLIDLTP  105 (157)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTT-CEEEECST
T ss_pred             EcCCchhHHHhHHHHHHHHcC-CEEEEccc
Confidence            998765444433  4445554 45665544

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.00  E-value=0.018  Score=47.76  Aligned_cols=83  Identities=13%  Similarity=0.213  Sum_probs=51.6

Q ss_pred             CCCCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH---h-cCCceEeCCCCCCchhHHHHHHhhh--
Q 019822          148 VEKGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK---A-FGMTDFINPDDEPNKSISELVKGIT--  218 (335)
Q Consensus       148 ~~~~~~VlI~G~-g--~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~---~-lga~~v~~~~~~~~~~~~~~i~~~~--  218 (335)
                      .-+|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++   + .+...++..+.+.+.+..+.+.+..  
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            346899999985 5  699999999999999 9999998865433332   2 2222222111111233333333322  


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      -+ .+|+++.+.+.
T Consensus        81 ~g-~id~lV~nag~   93 (274)
T d2pd4a1          81 LG-SLDFIVHSVAF   93 (274)
T ss_dssp             TS-CEEEEEECCCC
T ss_pred             cC-CCCeEEeeccc
Confidence            23 68999988774

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.99  E-value=0.023  Score=42.81  Aligned_cols=86  Identities=14%  Similarity=0.275  Sum_probs=61.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      +|.++|+|.+|.+.+.-+...|. ++++.++++++.+.+ +++|....-        +..+.++      +.|+||-|+-
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~~--------~~~~~~~------~~dvIilavk   66 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYAM--------SHQDLID------QVDLVILGIK   66 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBCS--------SHHHHHH------TCSEEEECSC
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeeec--------hhhhhhh------ccceeeeecc
Confidence            47889999999988886666787 999999999887776 667754321        1222232      5799999886


Q ss_pred             ChHHHHHHHHhhccCCeEEEEEcc
Q 019822          232 VPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       232 ~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                       +..+...++.+.++ ..++.+..
T Consensus        67 -p~~~~~vl~~l~~~-~~iis~~a   88 (152)
T d2ahra2          67 -PQLFETVLKPLHFK-QPIISMAA   88 (152)
T ss_dssp             -GGGHHHHHTTSCCC-SCEEECCT
T ss_pred             -hHhHHHHhhhcccc-eeEecccc
Confidence             44678888888876 66665543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.98  E-value=0.01  Score=48.72  Aligned_cols=78  Identities=17%  Similarity=0.262  Sum_probs=49.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHH---HcCCCEEEEEcCChhhHHHHHhc----CCce--EeCCCCCCchhH---HHHHHhhh
Q 019822          152 SSVAVLGL-GTVGLGAVDGAR---MHGAAKIIGIDKNPWKKEKGKAF----GMTD--FINPDDEPNKSI---SELVKGIT  218 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~---~~G~~~V~~~~~~~~~~~~~~~l----ga~~--v~~~~~~~~~~~---~~~i~~~~  218 (335)
                      ++|||+|+ +++|++.++.+.   ..|+ +|+.+++++++.+.++++    +--.  .+|-.+  +.+.   .+.+++..
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~--~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN--FDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC--GGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc--HHHHHHHHhhhHHHh
Confidence            57999987 999999886554   3578 999999999877665432    2112  233332  2333   33333333


Q ss_pred             CCCCccEEEEcCCC
Q 019822          219 HGMGVDYCFECTGV  232 (335)
Q Consensus       219 ~g~g~d~vid~~g~  232 (335)
                      ...++|+++++.|.
T Consensus        80 ~~~~iDiLvnNAg~   93 (248)
T d1snya_          80 KDQGLNVLFNNAGI   93 (248)
T ss_dssp             GGGCCSEEEECCCC
T ss_pred             hcCCcceEEeeccc
Confidence            33379999998763

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.93  E-value=0.0078  Score=43.70  Aligned_cols=64  Identities=16%  Similarity=0.253  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      ..++++|+|+|.+|.-+++++..+|. +|..+.+.+.            ++..-+   ++..+.+++....+|+++.+++
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~~------------~l~~~d---~ei~~~l~~~l~~~GV~i~~~~   85 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQPQ------------IGASMD---GEVAKATQKFLKKQGLDFKLST   85 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS------------SSSSSC---HHHHHHHHHHHHHTTCEEECSE
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEeccc------------cchhhh---hhhHHHHHHHHHhccceEEeCC
Confidence            45799999999999999999999999 9999986432            222222   5566666665555578777754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.87  E-value=0.01  Score=42.60  Aligned_cols=65  Identities=18%  Similarity=0.249  Sum_probs=47.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ..+++++|+|+|.+|.-+++.+..+|. +|..+.+.+.            ++..-+   .+..+.+.+....+|+++..+
T Consensus        20 ~~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~------------il~~~d---~~~~~~l~~~l~~~GI~i~~~   83 (117)
T d1ebda2          20 EVPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE------------ILSGFE---KQMAAIIKKRLKKKGVEVVTN   83 (117)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS------------SSTTSC---HHHHHHHHHHHHHTTCEEEES
T ss_pred             hcCCeEEEECCCccceeeeeeeccccc-EEEEEEecce------------eccccc---chhHHHHHHHHHhcCCEEEcC
Confidence            345889999999999999999999999 9999986542            111222   456666666555557888875


Q ss_pred             c
Q 019822          229 C  229 (335)
Q Consensus       229 ~  229 (335)
                      +
T Consensus        84 ~   84 (117)
T d1ebda2          84 A   84 (117)
T ss_dssp             E
T ss_pred             C
Confidence            4

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.82  E-value=0.012  Score=50.35  Aligned_cols=105  Identities=26%  Similarity=0.235  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhh-CCC
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGIT-HGM  221 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~-~g~  221 (335)
                      .++++++||=+++|+ |..++.+++ .|+.+|++++.+++..+.+++    .|...-+....   .+..+.+..+. .++
T Consensus       142 ~~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~---~d~~~~~~~~~~~~~  216 (324)
T d2as0a2         142 WVQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV---GSAFEEMEKLQKKGE  216 (324)
T ss_dssp             GCCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHHTTC
T ss_pred             hcCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeee---chhhhhhHHHHhccC
Confidence            367899999887643 444455554 477699999999998887643    45421111111   22333333322 345


Q ss_pred             CccEEE-EcCCC--------------hHHHHHHHHhhccCCeEEEEEccCC
Q 019822          222 GVDYCF-ECTGV--------------PSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       222 g~d~vi-d~~g~--------------~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .||+|+ |.-..              ..++..+++.|+++ |.++.+....
T Consensus       217 ~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~s~  266 (324)
T d2as0a2         217 KFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCSQ  266 (324)
T ss_dssp             CEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECCT
T ss_pred             CCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeCCc
Confidence            899998 43211              12566778899997 9999887554

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.81  E-value=0.013  Score=42.15  Aligned_cols=43  Identities=19%  Similarity=0.148  Sum_probs=37.1

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      +.+.....++++|+|+|+|.+|.-.+..++.+|. +|..+.+.+
T Consensus        13 ~~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          13 LVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            4455667788999999999999999999999999 999998754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.79  E-value=0.012  Score=46.68  Aligned_cols=110  Identities=22%  Similarity=0.254  Sum_probs=71.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++.+.+.++......+|++.+ +.++            +.. ...|+.+=
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~~------------~~~-~~~DI~iP   89 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALED------------VLS-TPCDVFAP   89 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGGG------------GGG-CCCSEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Cccc------------ccc-ccceeeec
Confidence            478999999999999999999999999 99999999999998888887533 2221            122 26898886


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEEccCCCccccch-hH-HHhhcCcEEEEe
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVIGVGVDAMVPLN-VI-ALACGGRTLKGT  278 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~-~~~~~~~~~~g~  278 (335)
                      |..+..+-....+.+.-   +++ ++...+ +.... .. .+..|++.+.+-
T Consensus        90 cA~~~~I~~~~a~~i~a---k~i-~e~AN~-p~~~~~~~~~L~~rgI~~iPD  136 (201)
T d1c1da1          90 CAMGGVITTEVARTLDC---SVV-AGAANN-VIADEAASDILHARGILYAPD  136 (201)
T ss_dssp             CSCSCCBCHHHHHHCCC---SEE-CCSCTT-CBCSHHHHHHHHHTTCEECCH
T ss_pred             ccccccccHHHHhhhhh---hee-eccCCC-CcchhhHHHHhcccceEEEeh
Confidence            65443233455555644   333 343332 22222 22 234566666543

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.74  E-value=0.027  Score=45.34  Aligned_cols=108  Identities=8%  Similarity=-0.041  Sum_probs=66.3

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce-------------EeCCCCCCchhH
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD-------------FINPDDEPNKSI  210 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~-------------v~~~~~~~~~~~  210 (335)
                      ......++.+||..|+|. |..+..||+ .|+ +|++++.|++..+.+++.....             ..........-.
T Consensus        39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445678899999999975 778888876 699 9999999999888775432110             000000000000


Q ss_pred             HHHHHhh--hCCCCccEEEEcCCC--------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          211 SELVKGI--THGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       211 ~~~i~~~--~~g~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ...+.++  .....+|+|+++..-        ...+..+.++|+++ |+++....
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~  169 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL  169 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence            0001111  112268999986532        23567889999998 98776654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.73  E-value=0.069  Score=43.40  Aligned_cols=101  Identities=19%  Similarity=0.227  Sum_probs=62.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh--CCC
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGI-DKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT--HGM  221 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~-~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~--~g~  221 (335)
                      .+||+|+ +++|++.++.+...|+ +|+.+ .+++++.+.+    ++.|.+.   ..|-.+  ..+..+.+++..  -| 
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~--~~~v~~~~~~~~~~~g-   78 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK--EADVEAMMKTAIDAWG-   78 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS--HHHHHHHHHHHHHHSS-
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC--HHHHHHHHHHHHHHcC-
Confidence            5677786 9999999999999999 88776 4566555443    4455322   223333  223333333322  13 


Q ss_pred             CccEEEEcCCChH-------------------------HHHHHHHhh--ccCCeEEEEEccCCC
Q 019822          222 GVDYCFECTGVPS-------------------------LLSEALETT--KVGKGKVIVIGVGVD  258 (335)
Q Consensus       222 g~d~vid~~g~~~-------------------------~~~~~~~~l--~~~~G~~v~~g~~~~  258 (335)
                      ++|+++++.|...                         ..+.+++.+  ..+ |++|.++...+
T Consensus        79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~IVnisS~~~  141 (244)
T d1edoa_          79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK-GRIINIASVVG  141 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCTHH
T ss_pred             CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCC-cEEEEEcChhh
Confidence            6999999887411                         234455555  344 99999986554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.69  E-value=0.25  Score=36.48  Aligned_cols=97  Identities=14%  Similarity=0.117  Sum_probs=60.3

Q ss_pred             CEEEEEc-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCC-ccEEEEc
Q 019822          152 SSVAVLG-LGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMG-VDYCFEC  229 (335)
Q Consensus       152 ~~VlI~G-~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g-~d~vid~  229 (335)
                      ++|.|+| .|.+|...+..++..|+ +|.+.+++++........+++.++....  .......+.+...... =.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~v~~~~~~~~~~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP--INLTLETIERLKPYLTENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC--GGGHHHHHHHHGGGCCTTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc--hhhheeeeecccccccCCceEEEe
Confidence            5899999 69999999999999999 9999999887666655556666554332  1333444444332211 1477787


Q ss_pred             CCChHHHHHHHHhhccCCeEEEEE
Q 019822          230 TGVPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       230 ~g~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .+........+....+  .+++..
T Consensus        87 ~Svk~~~~~~~~~~~~--~~~v~~  108 (152)
T d2pv7a2          87 TSVKREPLAKMLEVHT--GAVLGL  108 (152)
T ss_dssp             CSCCHHHHHHHHHHCS--SEEEEE
T ss_pred             cccCHHHHHHHHHHcc--CCEEEe
Confidence            7654333333333333  345433

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.69  E-value=0.0086  Score=43.02  Aligned_cols=63  Identities=22%  Similarity=0.161  Sum_probs=44.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .++|+|+|+|.+|.-+++.++.+|. +|..+.+.+.-            +...+   ++..+.+.+....+|+++..++
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~~------------l~~~d---~~~~~~~~~~l~~~GV~~~~~~   83 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDAP------------LPSFD---PMISETLVEVMNAEGPQLHTNA   83 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS------------STTSC---HHHHHHHHHHHHHHSCEEECSC
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecchh------------hhhcc---hhhHHHHHHHHHHCCCEEEeCC
Confidence            5789999999999999999999999 99999875431            11222   4455555554444567766644

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.66  E-value=0.0058  Score=51.53  Aligned_cols=99  Identities=15%  Similarity=0.118  Sum_probs=63.7

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc----CCc-----eEeCCCCCCchhHHHHHH
Q 019822          145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF----GMT-----DFINPDDEPNKSISELVK  215 (335)
Q Consensus       145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l----ga~-----~v~~~~~~~~~~~~~~i~  215 (335)
                      ..+..++.+||-+|+|+ |..++.|++. |+ +|++++.|++-++.+++.    +..     ..+..     .++...-.
T Consensus        51 ~l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  122 (292)
T d1xvaa_          51 LLRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE-----ANWLTLDK  122 (292)
T ss_dssp             HHHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE-----CCGGGHHH
T ss_pred             HhhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeee-----cccccccc
Confidence            34445678999999874 7888888875 88 999999999988777442    211     01100     11211112


Q ss_pred             hhhCCCCccEEEEcCCC--------------hHHHHHHHHhhccCCeEEEE
Q 019822          216 GITHGMGVDYCFECTGV--------------PSLLSEALETTKVGKGKVIV  252 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~--------------~~~~~~~~~~l~~~~G~~v~  252 (335)
                      .......+|.|+.....              ...++.+.+.|+++ |.++.
T Consensus       123 ~~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         123 DVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             HSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             ccCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence            33334579999864321              12678999999998 98876

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.65  E-value=0.072  Score=46.71  Aligned_cols=105  Identities=22%  Similarity=0.253  Sum_probs=69.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-----------C----CceE-eCCCCC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-----------G----MTDF-INPDDE  205 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-----------g----a~~v-~~~~~~  205 (335)
                      +++..++++++++|=+|+| +|..+.++|+..|+++|++++.++...+.+++.           |    .... +.... 
T Consensus       208 Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f-  285 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF-  285 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS-
T ss_pred             HHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeech-
Confidence            5688899999999999998 499999999999987999999999877666431           1    1111 11111 


Q ss_pred             CchhHHHHHHhhhCCCCccEEEE-cCCC----hHHHHHHHHhhccCCeEEEEEc
Q 019822          206 PNKSISELVKGITHGMGVDYCFE-CTGV----PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       206 ~~~~~~~~i~~~~~g~g~d~vid-~~g~----~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ...+.   .....  ..+|+++- +.-.    ...+..+.+.|+++ |+++...
T Consensus       286 ~~~~~---~d~~~--~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~  333 (406)
T d1u2za_         286 VDNNR---VAELI--PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  333 (406)
T ss_dssp             TTCHH---HHHHG--GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             hhccc---ccccc--ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence            00111   11111  14788873 2211    23467888899997 9998864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.64  E-value=0.0092  Score=43.31  Aligned_cols=63  Identities=11%  Similarity=0.072  Sum_probs=45.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+++++|+|+|.+|+-.+++++.+|. +|..+.++  +  .+.         .-+   .+..+.+++....+|+++..++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~--~--~l~---------~~D---~~~~~~l~~~l~~~Gv~i~~~~   81 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS--I--LLR---------GFD---QDMANKIGEHMEEHGIKFIRQF   81 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS--S--SST---------TSC---HHHHHHHHHHHHHTTEEEEESC
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec--h--hhc---------cCC---HHHHHHHHHHHHHCCCEEEECC
Confidence            45689999999999999999999999 88888754  1  111         112   4566666665555578877764

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.55  E-value=0.048  Score=41.21  Aligned_cols=107  Identities=23%  Similarity=0.307  Sum_probs=72.5

Q ss_pred             HHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822          142 AWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       142 l~~~~~-~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      +.+..+ .-.|++++|.|-|-+|.-.++-++.+|+ +|++++.++-+.-.+.--|.. |.        ...+.+      
T Consensus        13 i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~--------~~~~a~------   76 (163)
T d1v8ba1          13 LMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV--------TLDEIV------   76 (163)
T ss_dssp             HHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC--------CHHHHT------
T ss_pred             HHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cC--------chhHcc------
Confidence            334444 5789999999999999999999999999 999999988554333323432 21        121222      


Q ss_pred             CCccEEEEcCCChHHH-HHHHHhhccCCeEEEEEccCCCccccchhHHH
Q 019822          221 MGVDYCFECTGVPSLL-SEALETTKVGKGKVIVIGVGVDAMVPLNVIAL  268 (335)
Q Consensus       221 ~g~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~  268 (335)
                      +..|+++-++|....+ ..-++.++++ ..+.-+|-.   ..+++...+
T Consensus        77 ~~aDi~vTaTGn~~vI~~~h~~~MKdg-aIl~N~GHf---d~EIdv~~L  121 (163)
T d1v8ba1          77 DKGDFFITCTGNVDVIKLEHLLKMKNN-AVVGNIGHF---DDEIQVNEL  121 (163)
T ss_dssp             TTCSEEEECCSSSSSBCHHHHTTCCTT-CEEEECSST---TTSBCHHHH
T ss_pred             ccCcEEEEcCCCCccccHHHHHHhhCC-eEEEecccc---chhhhhHHH
Confidence            1579999999987543 5778888886 555555443   345555443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.51  E-value=0.026  Score=44.97  Aligned_cols=72  Identities=19%  Similarity=0.161  Sum_probs=47.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAA-KIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~-~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      .+|||+|+ |.+|..++..+...|.. .|+.+.+++++.+.+.. +...+ .|..+   .   ..+.+...  ++|.|+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~~~d~~~---~---~~~~~~~~--~~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFIGDITD---A---DSINPAFQ--GIDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEEECCTTS---H---HHHHHHHT--TCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEEEeeecc---c---cccccccc--cceeeEE
Confidence            68999987 99999999999888862 57777888777655432 22222 22222   2   22333332  6899998


Q ss_pred             cCCC
Q 019822          229 CTGV  232 (335)
Q Consensus       229 ~~g~  232 (335)
                      +.+.
T Consensus        75 ~a~~   78 (252)
T d2q46a1          75 LTSA   78 (252)
T ss_dssp             CCCC
T ss_pred             EEee
Confidence            7753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.48  E-value=0.011  Score=48.45  Aligned_cols=47  Identities=23%  Similarity=0.247  Sum_probs=40.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HhcCC
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG-KAFGM  196 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~-~~lga  196 (335)
                      -+|+.+||+|+ +++|.+.++-+...|+ +|+.+++++++.+.+ ++++.
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~   51 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGN   51 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCC
Confidence            36899999987 9999999999999999 999999998877664 55654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.45  E-value=0.017  Score=41.63  Aligned_cols=65  Identities=17%  Similarity=0.252  Sum_probs=45.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ..+++++|+|+|.+|.=.++.++.+|. +|..+.+++.            ++..-+   .+....+++.....|+++..+
T Consensus        20 ~~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~~------------ll~~~d---~ei~~~l~~~l~~~Gv~i~~~   83 (119)
T d3lada2          20 NVPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMDK------------FLPAVD---EQVAKEAQKILTKQGLKILLG   83 (119)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS------------SSTTSC---HHHHHHHHHHHHHTTEEEEET
T ss_pred             cCCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeecc------------cCCccc---chhHHHHHHHHHhcCceeecC
Confidence            345889999999999999999999999 9999986532            222222   455555655554446666665


Q ss_pred             c
Q 019822          229 C  229 (335)
Q Consensus       229 ~  229 (335)
                      +
T Consensus        84 ~   84 (119)
T d3lada2          84 A   84 (119)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.42  E-value=0.033  Score=40.18  Aligned_cols=73  Identities=16%  Similarity=0.171  Sum_probs=51.1

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCC
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      .+.....++++|+|+|+|.+|+-+++.+..+|. +|..+++.+.            ++...  .+.+..+.+++....+|
T Consensus        22 ~~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~~------------~l~~~--~d~~~~~~~~~~l~~~g   86 (123)
T d1nhpa2          22 KQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILDR------------PLGVY--LDKEFTDVLTEEMEANN   86 (123)
T ss_dssp             HHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS------------TTTTT--CCHHHHHHHHHHHHTTT
T ss_pred             HHHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecCc------------ccccc--cchhhHHHHHHHhhcCC
Confidence            344445567899999999999999999999999 9999986532            11111  01456666666665667


Q ss_pred             ccEEEEcC
Q 019822          223 VDYCFECT  230 (335)
Q Consensus       223 ~d~vid~~  230 (335)
                      +++..++.
T Consensus        87 v~~~~~~~   94 (123)
T d1nhpa2          87 ITIATGET   94 (123)
T ss_dssp             EEEEESCC
T ss_pred             eEEEeCce
Confidence            88877643

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.40  E-value=0.039  Score=43.90  Aligned_cols=102  Identities=18%  Similarity=0.053  Sum_probs=65.4

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822          145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      ...++||++||=+|+|+ |..+..+++..+..+|++++.+++..+.+++    .+....+..+... ...   ...  .-
T Consensus        51 ~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~-~~~---~~~--~~  123 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASK-PWK---YSG--IV  123 (209)
T ss_dssp             CCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTC-GGG---TTT--TC
T ss_pred             cCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccC-ccc---ccc--cc
Confidence            35689999999999875 7788888888775599999999988776633    3322222222100 110   001  11


Q ss_pred             CCccEEEEcCCCh----HHHHHHHHhhccCCeEEEEEc
Q 019822          221 MGVDYCFECTGVP----SLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       221 ~g~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ..+|+++..+...    ..+.++.+.|+++ |+++.+-
T Consensus       124 ~~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  160 (209)
T d1nt2a_         124 EKVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIMV  160 (209)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ceEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEEE
Confidence            2567777544322    2467788899998 9987663

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.34  E-value=0.13  Score=38.30  Aligned_cols=99  Identities=19%  Similarity=0.223  Sum_probs=62.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEcCChh--hH-HHHHhcCCceEeCCCCCCchhHHHHHHhhh------
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMH--GAAKIIGIDKNPW--KK-EKGKAFGMTDFINPDDEPNKSISELVKGIT------  218 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~--G~~~V~~~~~~~~--~~-~~~~~lga~~v~~~~~~~~~~~~~~i~~~~------  218 (335)
                      .++|.|+|+ |.+|..+.++.+..  .+ +|+++....+  .+ +.+++|.+..++-.++   .. .+.++...      
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~---~~-~~~l~~~~~~~~~~   76 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADP---SL-YNDLKEALAGSSVE   76 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCG---GG-HHHHHHHTTTCSSE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccH---HH-HHHHHHHhhhcccc
Confidence            378999998 99999999999875  46 7766664433  22 3346787777654432   11 11221111      


Q ss_pred             -----------CCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          219 -----------HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       219 -----------~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                                 ....+|+++.++.+...+...+.++..+  .-+.+...
T Consensus        77 v~~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g--k~iaLANK  123 (150)
T d1r0ka2          77 AAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG--KTVALANK  123 (150)
T ss_dssp             EEESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT--SEEEECCS
T ss_pred             cccCccchheecccccceeeeecCchhHHHHHHHHHhcC--CEEEEecc
Confidence                       1235888888877776788888888774  34444443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.32  E-value=0.049  Score=44.51  Aligned_cols=84  Identities=17%  Similarity=0.190  Sum_probs=51.7

Q ss_pred             CCCCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhhh-C
Q 019822          148 VEKGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGIT-H  219 (335)
Q Consensus       148 ~~~~~~VlI~G~-g--~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~~-~  219 (335)
                      .-+++++||+|+ |  ++|.+.+..+...|+ +|+.++++++..+.++    ..+....+..+.....+......+.. .
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            357899999986 5  688999999999999 9999998876555443    33433332222211122222332222 2


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      ....|+.+++.+.
T Consensus        81 ~~~~d~~v~~a~~   93 (258)
T d1qsga_          81 WPKFDGFVHSIGF   93 (258)
T ss_dssp             CSSEEEEEECCCC
T ss_pred             ccccceEEEeecc
Confidence            2267899987653

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.29  E-value=0.045  Score=43.42  Aligned_cols=94  Identities=20%  Similarity=0.224  Sum_probs=62.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eEeCCCCCCchhHHHHHHhhhCCC
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      .+.++.+||-+|+|+ |..+..+++ .|. +|++++.|++..+.+++    .+.. ..+..+.   .++     .+ ...
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~---~~l-----~~-~~~  101 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA---RKL-----SF-EDK  101 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT---TSC-----CS-CTT
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccccccc---ccc-----cc-cCc
Confidence            357889999999975 778888887 477 99999999998877754    3321 1221211   110     01 223


Q ss_pred             CccEEEEcCC-----Ch---HHHHHHHHhhccCCeEEEEE
Q 019822          222 GVDYCFECTG-----VP---SLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       222 g~d~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .+|+|+....     ..   ..+..+.+.|+++ |+++..
T Consensus       102 ~fD~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         102 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CceEEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            7999985332     11   2577889999998 998754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.24  E-value=0.013  Score=42.42  Aligned_cols=65  Identities=15%  Similarity=0.191  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ..+++++|+|+|.+|+=.+++++.+|. +|.++.+++.-            +...+   ++....+.+....+|+++..+
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~~------------l~~~d---~~~~~~l~~~l~~~GI~i~~~   86 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASEI------------VPTMD---AEIRKQFQRSLEKQGMKFKLK   86 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSSS------------STTSC---HHHHHHHHHHHHHSSCCEECS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEcccc------------Cchhh---hcchhhhhhhhhcccceEEcC
Confidence            346899999999999999999999999 99999875432            22222   455556666555557777765


Q ss_pred             c
Q 019822          229 C  229 (335)
Q Consensus       229 ~  229 (335)
                      +
T Consensus        87 ~   87 (123)
T d1dxla2          87 T   87 (123)
T ss_dssp             E
T ss_pred             C
Confidence            4

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.23  E-value=0.015  Score=42.32  Aligned_cols=63  Identities=14%  Similarity=0.081  Sum_probs=45.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .++++|+|+|.+|+-++..++.+|. +|..+.+++.            ++...+   .+..+.+++....+|+++..++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~~------------~l~~~d---~~~~~~~~~~l~~~Gv~i~~~~   84 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHDK------------VLRSFD---SMISTNCTEELENAGVEVLKFS   84 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS------------SCTTSC---HHHHHHHHHHHHHTTCEEETTE
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeeccc------------cccchh---hHHHHHHHHHHHHCCCEEEeCC
Confidence            4789999999999999999999999 9999997532            111112   4455556555555577776644

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.19  E-value=0.16  Score=43.16  Aligned_cols=105  Identities=18%  Similarity=0.230  Sum_probs=69.5

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh-----------cCC----ceEeCCCCCC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA-----------FGM----TDFINPDDEP  206 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~-----------lga----~~v~~~~~~~  206 (335)
                      +.+..+++++++||=+|+|. |..+.++|+..++.++++++.+++..+.+++           +|.    -..+..+- .
T Consensus       143 ~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~-~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDF-L  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCT-T
T ss_pred             HHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcc-c
Confidence            56778999999999999874 8889999999998789999999987666532           121    12222221 1


Q ss_pred             chhHHHHHHhhhCCCCccEEEE-cCCC-h---HHHHHHHHhhccCCeEEEEEcc
Q 019822          207 NKSISELVKGITHGMGVDYCFE-CTGV-P---SLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       207 ~~~~~~~i~~~~~g~g~d~vid-~~g~-~---~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ...+.+.+.      .+|+|+- +.-. +   ..+....+.|+++ |++|....
T Consensus       221 ~~~~~~~~~------~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~~  267 (328)
T d1nw3a_         221 SEEWRERIA------NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKP  267 (328)
T ss_dssp             SHHHHHHHH------HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESSC
T ss_pred             ccccccccC------cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEecc
Confidence            123333222      3678873 2221 2   2456778889997 99987643

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.15  E-value=0.02  Score=46.24  Aligned_cols=102  Identities=25%  Similarity=0.255  Sum_probs=66.7

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhc----CCceEeCCCCCCchhHHHHHHhhh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAF----GMTDFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      +...++||++||=+|+|+ |..+..+++..|. .+|++++.+++..+.+++.    +....+..+...+..    .. ..
T Consensus        67 ~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~----~~-~~  140 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEE----YR-AL  140 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGG----GT-TT
T ss_pred             cccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCccc----cc-cc
Confidence            446789999999999875 8889999998874 3899999999888776442    222222222100111    11 11


Q ss_pred             CCCCccEEEEcCCCh----HHHHHHHHhhccCCeEEEEE
Q 019822          219 HGMGVDYCFECTGVP----SLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       219 ~g~g~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~  253 (335)
                      . ..+|+++..+..+    ..+..+.+.|+++ |+++.+
T Consensus       141 ~-~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         141 V-PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             C-CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             c-cceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            2 2688887544322    2567888899998 988765

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.13  E-value=0.0086  Score=46.75  Aligned_cols=36  Identities=19%  Similarity=0.328  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      +++|+|+|+|+.|+.++..++..|+++|.++++++.
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999999999999999999999856888887653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.12  E-value=0.14  Score=39.22  Aligned_cols=44  Identities=18%  Similarity=0.246  Sum_probs=38.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  196 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga  196 (335)
                      .+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            578899999999998888888899 99999999999988866553

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.023  Score=44.68  Aligned_cols=39  Identities=26%  Similarity=0.344  Sum_probs=35.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      ++|.|+|+|.+|...++++...|+ +|+..+++++.++.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            589999999999999999999999 999999999876654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.08  E-value=0.0071  Score=46.09  Aligned_cols=89  Identities=15%  Similarity=0.174  Sum_probs=56.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc-----eEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT-----DFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~-----~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      +|+|+|+|.+|.+.+..+...|. +|..+++++++.+.....+..     ..+....      .+.+      ..+|++|
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~------~~~D~ii   68 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTAND------PDFL------ATSDLLL   68 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESC------HHHH------HTCSEEE
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccch------hhhh------cccceEE
Confidence            68999999999998888888999 999999987655433222211     1111111      1112      1689999


Q ss_pred             EcCCChHH---HHHHHHhhccCCeEEEEEcc
Q 019822          228 ECTGVPSL---LSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       228 d~~g~~~~---~~~~~~~l~~~~G~~v~~g~  255 (335)
                      -++.....   ++.+...+.++ ..++.+..
T Consensus        69 i~vka~~~~~~~~~l~~~~~~~-~~Iv~~qN   98 (167)
T d1ks9a2          69 VTLKAWQVSDAVKSLASTLPVT-TPILLIHN   98 (167)
T ss_dssp             ECSCGGGHHHHHHHHHTTSCTT-SCEEEECS
T ss_pred             EeecccchHHHHHhhccccCcc-cEEeeccC
Confidence            99887532   23333444554 56666644

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=95.07  E-value=0.022  Score=47.42  Aligned_cols=97  Identities=15%  Similarity=0.030  Sum_probs=66.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-----C-----ceEeCCCCCCchhHHHHHHhh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-----M-----TDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-----a-----~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ....++|||+|+|. |..+..++++.+.++|.+++.+++-.+.++++-     +     -.++..      |..+.+++.
T Consensus        73 ~~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~------D~~~~l~~~  145 (274)
T d1iy9a_          73 HPNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD------DGFMHIAKS  145 (274)
T ss_dssp             SSSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES------CSHHHHHTC
T ss_pred             cCCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec------hHHHHHhhc
Confidence            35668999998764 666777788777779999999999888876642     1     112222      233445442


Q ss_pred             hCCCCccEEE-EcCC---------ChHHHHHHHHhhccCCeEEEEEc
Q 019822          218 THGMGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       218 ~~g~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                        .+.+|+|+ |...         +.+.++.+.+.|+++ |.++.-.
T Consensus       146 --~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~  189 (274)
T d1iy9a_         146 --ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (274)
T ss_dssp             --CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             --CCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEec
Confidence              34799997 5433         344688999999998 9888754

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.03  E-value=0.035  Score=39.99  Aligned_cols=68  Identities=22%  Similarity=0.386  Sum_probs=49.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .+.++++++|+|+|.+|.-++..++..|. +|..+++++.=            +...  .+....+.+++....+|+++.
T Consensus        26 ~~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~~------------l~~~--~~~~~~~~~~~~l~~~GV~i~   90 (121)
T d1d7ya2          26 GLRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPRL------------MSRA--APATLADFVARYHAAQGVDLR   90 (121)
T ss_dssp             HCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSST------------TTTT--SCHHHHHHHHHHHHTTTCEEE
T ss_pred             hhhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeecccc------------cccc--CCHHHHHHHHHHHHHCCcEEE
Confidence            35678999999999999999999999999 99999876431            1111  014566666666656688887


Q ss_pred             EEc
Q 019822          227 FEC  229 (335)
Q Consensus       227 id~  229 (335)
                      .++
T Consensus        91 ~~~   93 (121)
T d1d7ya2          91 FER   93 (121)
T ss_dssp             ESC
T ss_pred             eCC
Confidence            754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.01  E-value=0.027  Score=45.42  Aligned_cols=48  Identities=27%  Similarity=0.298  Sum_probs=41.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-hcCCc
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK-AFGMT  197 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~-~lga~  197 (335)
                      -.+.+|+|.|.|.||..+++++...|+ +|++++.++.+.+.+. ..|+.
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc
Confidence            478999999999999999999999999 9999999888877654 45553

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=94.98  E-value=0.026  Score=41.02  Aligned_cols=65  Identities=11%  Similarity=0.125  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ..+++++|+|+|.+|.=+++.++.+|. +|..+.+.+            +++...+   .+..+.+++....+++.+..+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~------------~il~~~d---~~~~~~l~~~l~~~gv~~~~~   87 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD------------GLMQGAD---RDLVKVWQKQNEYRFDNIMVN   87 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS------------SSSTTSC---HHHHHHHHHHHGGGEEEEECS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec------------cccccch---hhHHHHHHHHHHHcCcccccC
Confidence            446899999999999999999999999 999998642            1222222   566666666655556666665


Q ss_pred             c
Q 019822          229 C  229 (335)
Q Consensus       229 ~  229 (335)
                      +
T Consensus        88 ~   88 (125)
T d1ojta2          88 T   88 (125)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=94.91  E-value=0.051  Score=46.02  Aligned_cols=95  Identities=14%  Similarity=0.096  Sum_probs=63.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC------C-----ceEeCCCCCCchhHHHHHHhh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG------M-----TDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg------a-----~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ...++|||+|+|. |..+-.+++.....+|.+++.+++-.+.++++-      +     -.++.      .|..+.+++.
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~------~Da~~~l~~~  148 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI------DDARAYLERT  148 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE------SCHHHHHHHC
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE------chHHHHhhhc
Confidence            4568999998764 666677777766559999999998888776531      1     11221      3345555542


Q ss_pred             hCCCCccEEE-EcC---C---------ChHHHHHHHHhhccCCeEEEEE
Q 019822          218 THGMGVDYCF-ECT---G---------VPSLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       218 ~~g~g~d~vi-d~~---g---------~~~~~~~~~~~l~~~~G~~v~~  253 (335)
                        .+.+|+|| |..   +         +.+.++.+.+.|+++ |.++.-
T Consensus       149 --~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~  194 (312)
T d1uira_         149 --EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQ  194 (312)
T ss_dssp             --CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEE
T ss_pred             --CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEe
Confidence              34799997 542   2         123567889999998 988764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.90  E-value=0.047  Score=42.69  Aligned_cols=98  Identities=23%  Similarity=0.302  Sum_probs=62.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCceE-eCCCCCCchhHHHHHHhhhCC
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTDF-INPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~v-~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      +...++.+||-+|+| .|..+..+++ .|+ +|++++.+++.++.+++    .+.+.+ +...+         +.++...
T Consensus        26 ~~~~~~grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d---------~~~~~~~   93 (198)
T d2i6ga1          26 AKVVAPGRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVD---------LNTLTFD   93 (198)
T ss_dssp             HTTSCSCEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC---------TTTCCCC
T ss_pred             cccCCCCcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhhee---------ccccccc
Confidence            444445589999987 5887877776 588 99999999988877643    343321 11111         1111112


Q ss_pred             CCccEEEEcCC-----C---hHHHHHHHHhhccCCeEEEEEccC
Q 019822          221 MGVDYCFECTG-----V---PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       221 ~g~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ..||+|+...-     .   ...+..+.+.|+++ |+++.....
T Consensus        94 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~~  136 (198)
T d2i6ga1          94 GEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAAM  136 (198)
T ss_dssp             CCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEEB
T ss_pred             ccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            37999986332     1   13667788889997 998876543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.87  E-value=0.15  Score=37.99  Aligned_cols=99  Identities=17%  Similarity=0.231  Sum_probs=63.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEcCChh--hH-HHHHhcCCceEeCCCCCCchhH---H-----------
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMH--GAAKIIGIDKNPW--KK-EKGKAFGMTDFINPDDEPNKSI---S-----------  211 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~--G~~~V~~~~~~~~--~~-~~~~~lga~~v~~~~~~~~~~~---~-----------  211 (335)
                      ++|.|+|+ |++|..+..+.+..  .+ +|+++....+  .+ +.+++|....++-.++   ...   .           
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~---~~~~~l~~~l~~~~~~~~   77 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDE---ASAKLLKTMLQQQGSRTE   77 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSH---HHHHHHHHHHHHTTCCCE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccH---HHHHHHHHHhhhhccccc
Confidence            36889998 99999999999876  35 6766653333  22 2246677777655443   211   1           


Q ss_pred             -----HHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          212 -----ELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       212 -----~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                           +.+.++.....+|+|+.+..+...+.-.+.++..+  .-+.+...
T Consensus        78 ~~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g--k~iaLANK  125 (151)
T d1q0qa2          78 VLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG--KTILLANK  125 (151)
T ss_dssp             EEESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT--CEEEECCH
T ss_pred             cccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC--CeEEEEcc
Confidence                 11222223346899998888777888888888874  44555443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.86  E-value=0.02  Score=40.65  Aligned_cols=69  Identities=17%  Similarity=0.225  Sum_probs=45.7

Q ss_pred             CCC-CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceE-eCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          149 EKG-SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDF-INPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       149 ~~~-~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .++ .+|.|+|+|.+|++.++-|+.+|+ ++++.+.+++..  +.++....+ .++++   .+   .++++....++|+|
T Consensus         8 ~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~P--A~~va~~~i~~~~~d---~~---~l~~~~~~~~~Dvi   78 (111)
T d1kjqa2           8 RPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADAP--AMHVAHRSHVINMLD---GD---ALRRVVELEKPHYI   78 (111)
T ss_dssp             STTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTCG--GGGGSSEEEECCTTC---HH---HHHHHHHHHCCSEE
T ss_pred             CCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCCc--hhhcCCeEEECCCCC---HH---HHHHHHHhhCCceE
Confidence            344 469999999999999999999999 999999776543  223333333 34444   33   33333222257877

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.84  E-value=0.014  Score=45.80  Aligned_cols=84  Identities=11%  Similarity=0.044  Sum_probs=55.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc------eEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT------DFINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~------~v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      .+|.|+|+|..|.+.+.++...|. +|...+++++..+.+.+-+..      ..++.+    -.+...+.+...  +.|+
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~----i~~t~~l~~a~~--~ad~   80 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASN----ITFTSDVEKAYN--GAEI   80 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTT----EEEESCHHHHHT--TCSC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccc----cccchhhhhccC--CCCE
Confidence            469999999999999999988888 999999999888877543311      011110    001111222222  5799


Q ss_pred             EEEcCCChHHHHHHHHhh
Q 019822          226 CFECTGVPSLLSEALETT  243 (335)
Q Consensus       226 vid~~g~~~~~~~~~~~l  243 (335)
                      ++-++... .++..++.+
T Consensus        81 iiiavPs~-~~~~~~~~~   97 (189)
T d1n1ea2          81 ILFVIPTQ-FLRGFFEKS   97 (189)
T ss_dssp             EEECSCHH-HHHHHHHHH
T ss_pred             EEEcCcHH-HHHHHHHHH
Confidence            99999876 556665544

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=94.83  E-value=0.061  Score=43.65  Aligned_cols=103  Identities=16%  Similarity=0.136  Sum_probs=63.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCC------EEEEEcCChhhHHHH----HhcCCce---EeCCCCCCchhHHHHHHhhh
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAA------KIIGIDKNPWKKEKG----KAFGMTD---FINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~------~V~~~~~~~~~~~~~----~~lga~~---v~~~~~~~~~~~~~~i~~~~  218 (335)
                      .|||+|+ +++|++.+..+...|++      .|+..++++++.+.+    ++.|...   ..|-.+  ..+..+.+++..
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~--~~~v~~~~~~~~   80 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD--MADVRRLTTHIV   80 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS--HHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHH
Confidence            4688887 99999999988888883      388999998887664    3344322   123332  233333333221


Q ss_pred             --CCCCccEEEEcCCCh----------H---------------HHHHHHHhhcc-CCeEEEEEccCCC
Q 019822          219 --HGMGVDYCFECTGVP----------S---------------LLSEALETTKV-GKGKVIVIGVGVD  258 (335)
Q Consensus       219 --~g~g~d~vid~~g~~----------~---------------~~~~~~~~l~~-~~G~~v~~g~~~~  258 (335)
                        -| ++|+++++.|..          +               ..+.+++.+.. ++|+++.++....
T Consensus        81 ~~~g-~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  147 (240)
T d2bd0a1          81 ERYG-HIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  147 (240)
T ss_dssp             HHTS-CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             HHcC-CcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence              23 699999988741          1               23344555532 1389999876554

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.80  E-value=0.073  Score=44.79  Aligned_cols=74  Identities=22%  Similarity=0.252  Sum_probs=44.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC--Ch---hhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK--NP---WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~--~~---~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      +|||+|+ |-+|..++..+...|+ +|+++++  ..   ++...+...+--..+..+-++ .+   .+.+...+.++|+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~-~~---~l~~~~~~~~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN-KN---DVTRLITKYMPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC-HH---HHHHHHHHHCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCC-HH---HHHHHHHhcCCceE
Confidence            6999987 9999999999988899 9999863  12   223334444322222222101 22   23333333368999


Q ss_pred             EEcCC
Q 019822          227 FECTG  231 (335)
Q Consensus       227 id~~g  231 (335)
                      |.+..
T Consensus        77 ih~aa   81 (338)
T d1orra_          77 FHLAG   81 (338)
T ss_dssp             EECCC
T ss_pred             Eeecc
Confidence            99775

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.78  E-value=0.017  Score=47.11  Aligned_cols=34  Identities=26%  Similarity=0.310  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .++|+|+|+|..|++++..++..|. +|+++++++
T Consensus         4 ~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            5789999999999999999999999 999999754

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=94.74  E-value=0.047  Score=43.96  Aligned_cols=107  Identities=17%  Similarity=0.170  Sum_probs=69.9

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhhh-
Q 019822          145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGIT-  218 (335)
Q Consensus       145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~~-  218 (335)
                      ..+....++||-+|.+ +|..++.+|+.+.- .+|+.++.+++..+.++    +.|...-+....   .+..+.+.++. 
T Consensus        54 L~~~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~---g~a~~~L~~l~~  129 (227)
T d1susa1          54 LLKLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE---GPALPVLDEMIK  129 (227)
T ss_dssp             HHHHHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE---SCHHHHHHHHHH
T ss_pred             HHHhcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee---hHHHHHHHHHHh
Confidence            3445677899999975 48888889988742 39999999998776664    356433222221   23444444432 


Q ss_pred             ---CCCCccEEE-EcCCC--hHHHHHHHHhhccCCeEEEEEccC
Q 019822          219 ---HGMGVDYCF-ECTGV--PSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       219 ---~g~g~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                         ....||+|| |+--.  ...++.+++.++++ |.++.=...
T Consensus       130 ~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DNvl  172 (227)
T d1susa1         130 DEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDNTL  172 (227)
T ss_dssp             CGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEETTT
T ss_pred             ccccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEccCC
Confidence               123799998 64432  34678999999997 887765543

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.72  E-value=0.23  Score=37.89  Aligned_cols=101  Identities=19%  Similarity=0.226  Sum_probs=62.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcC-CCEEEEEc-CC-hhhHHHHHhcCCceEeCCCCCCchhHHH-------HHHhhhCCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHG-AAKIIGID-KN-PWKKEKGKAFGMTDFINPDDEPNKSISE-------LVKGITHGMG  222 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~-~~-~~~~~~~~~lga~~v~~~~~~~~~~~~~-------~i~~~~~g~g  222 (335)
                      +|.|.|.|.+|+.+++.+.... . +++++. .+ .+....+.+++.+......+ ....+..       .+.+..  .+
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~   79 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEE-FIPRFEKEGFEVAGTLNDLL--EK   79 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGG-GHHHHHHHTCCCSCBHHHHH--TT
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeeccccc-ceeeecccCccccchhhhhh--cc
Confidence            6889999999999888876543 4 666554 22 23445566666543321111 0001111       011111  26


Q ss_pred             ccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          223 VDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       223 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      +|+|+||+|.-...+.+-..+..+ -+.|.++.+..
T Consensus        80 vDvViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~~~  114 (172)
T d2czca2          80 VDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKA  114 (172)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCG
T ss_pred             CCEEEECCCCCCCHHHHHHHHHcC-CCEEEECCCCc
Confidence            999999999765667888888887 78888877654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.68  E-value=0.02  Score=40.81  Aligned_cols=62  Identities=18%  Similarity=0.253  Sum_probs=44.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      +++++|+|+|.+|.-+++.++.+|. +|..+.+.+.            ++...+   .+..+.+++....+|+++..+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~~------------il~~~d---~~~~~~l~~~l~~~gV~i~~~   82 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARER------------ILPTYD---SELTAPVAESLKKLGIALHLG   82 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSSS------------SSTTSC---HHHHHHHHHHHHHHTCEEETT
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeecc------------cccccc---chhHHHHHHHHHhhcceEEcC
Confidence            4789999999999999999999999 9999986532            222222   455666655555556766654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.68  E-value=0.019  Score=44.65  Aligned_cols=37  Identities=24%  Similarity=0.368  Sum_probs=33.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+++|+|+|+|+.|+.++..+...|. +|+.+++++
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            3456899999999999999999999999 999999765

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.68  E-value=0.083  Score=43.25  Aligned_cols=82  Identities=13%  Similarity=0.206  Sum_probs=52.9

Q ss_pred             CCCCCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhH-HHH-HhcCCce---EeCCCCCCch---hHHHHHH
Q 019822          147 KVEKGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWKK-EKG-KAFGMTD---FINPDDEPNK---SISELVK  215 (335)
Q Consensus       147 ~~~~~~~VlI~G~-g--~vG~~ai~la~~~G~~~V~~~~~~~~~~-~~~-~~lga~~---v~~~~~~~~~---~~~~~i~  215 (335)
                      ++-.++++||+|+ |  ++|.+.++-+...|+ +|+.++++.++. +.+ ++++...   ..|-.+  ..   +..+.++
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~--~~~~~~~~~~v~   78 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN--EEHLASLAGRVT   78 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC--HHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeeccc--ccccccccchhh
Confidence            3457899999984 4  599999999999999 999999887765 323 4455322   223322  12   2233333


Q ss_pred             hhh-CCCCccEEEEcCC
Q 019822          216 GIT-HGMGVDYCFECTG  231 (335)
Q Consensus       216 ~~~-~g~g~d~vid~~g  231 (335)
                      +.. ....+|+++++.+
T Consensus        79 ~~~~~~~~ld~~i~~ag   95 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIG   95 (268)
T ss_dssp             HHHCTTCCEEEEEECCC
T ss_pred             hccccCCCcceeeeccc
Confidence            332 2236899998877

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.66  E-value=0.014  Score=38.50  Aligned_cols=36  Identities=19%  Similarity=0.212  Sum_probs=31.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK  188 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~  188 (335)
                      ++|.|+|+|.+|++.++-++.+|+ ++.+.+.+++..
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~p   37 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEPA   37 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCGG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCCc
Confidence            478999999999999999999999 999999765443

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.60  E-value=0.057  Score=44.43  Aligned_cols=96  Identities=18%  Similarity=0.142  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHHHHhhhC
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      .++++++||-+|+| +|..++.+|+.-++ +|++++.+++..+.+++    .+..   .++..+.          +++..
T Consensus       104 ~~~~g~~VlD~~aG-~G~~~l~~a~~~~~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~----------~~~~~  171 (260)
T d2frna1         104 VAKPDELVVDMFAG-IGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN----------RDFPG  171 (260)
T ss_dssp             HCCTTCEEEETTCT-TTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT----------TTCCC
T ss_pred             hcCCccEEEECcce-EcHHHHHHHHhCCc-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch----------HHhcc
Confidence            36899999998875 35566677775445 99999999998877743    3432   3443332          12233


Q ss_pred             CCCccEEE-Ec-CCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          220 GMGVDYCF-EC-TGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       220 g~g~d~vi-d~-~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ...+|.|+ +. ..+...+..+++.++++ |.+.....
T Consensus       172 ~~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~~  208 (260)
T d2frna1         172 ENIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHNT  208 (260)
T ss_dssp             CSCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEec
Confidence            33688666 43 23455788899999997 88766543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.53  E-value=0.11  Score=40.74  Aligned_cols=88  Identities=20%  Similarity=0.212  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+++|.|+|.|.+|..++++++.+|+ +|++.++........  .+..    .     .++.+.++      ..|+++.+
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~~----~-----~~l~~~l~------~sDii~~~  103 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGYY----V-----DSLDDLYK------QADVISLH  103 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTCB----C-----SCHHHHHH------HCSEEEEC
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--ceee----e-----cccccccc------cccccccc
Confidence            47899999999999999999999999 999998765433221  1211    1     12333333      36888876


Q ss_pred             CCCh-H---HH-HHHHHhhccCCeEEEEEccC
Q 019822          230 TGVP-S---LL-SEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       230 ~g~~-~---~~-~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .... .   .+ ...++.++++ ..+|=++..
T Consensus       104 ~plt~~T~~li~~~~l~~mk~~-a~lIN~sRG  134 (197)
T d1j4aa1         104 VPDVPANVHMINDESIAKMKQD-VVIVNVSRG  134 (197)
T ss_dssp             SCCCGGGTTCBSHHHHHHSCTT-EEEEECSCG
T ss_pred             CCccccccccccHHHHhhhCCc-cEEEecCch
Confidence            5421 1   12 4567777776 666666543

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.51  E-value=0.57  Score=35.60  Aligned_cols=136  Identities=13%  Similarity=0.085  Sum_probs=76.5

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHcCCC-EEEE-EcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          153 SVAVLGLGTVGLG-AVDGARMHGAA-KIIG-IDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       153 ~VlI~G~g~vG~~-ai~la~~~G~~-~V~~-~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      +|.|+|+|.+|.- .+...+...-. ++++ .++++++.+. .++++...+++       ++.+.+.    ...+|+|+-
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-------~~~ell~----~~~id~v~I   73 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-------SYEELLE----SGLVDAVDL   73 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-------CHHHHHH----SSCCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-------eeecccc----ccccceeec
Confidence            6889999999964 46666655422 5664 4666666555 46677665542       2333332    347999999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEEccCCC-cccc-chhHHHh-hcCcEEEEeeccCCC-CcCcHHHHHHHHhCCCC
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVIGVGVD-AMVP-LNVIALA-CGGRTLKGTTFGGIK-TKSDLPTLLDKCKNKEF  301 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~-~~~~~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~  301 (335)
                      |+......+.+..++..  |.=|++.-+.. .... .....+. .++..+.-...-++. ....+..+.+++.+|++
T Consensus        74 ~tp~~~h~~~~~~al~~--gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          74 TLPVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             CCCGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             ccccccccccccccccc--chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            88877677777777776  45566655443 1001 1111222 123333222111111 12346678888999885

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.51  E-value=0.049  Score=44.15  Aligned_cols=90  Identities=14%  Similarity=0.100  Sum_probs=59.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      .++++||=+|+|+ |..+..+++ .|. +|++++.|++-++.+++    .+.. .++..+          +.++...+.|
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d----------~~~~~~~~~f  102 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQD----------ISNLNINRKF  102 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCC----------GGGCCCSCCE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeeccc----------hhhhcccccc
Confidence            4567899999874 777777776 577 99999999998877744    2322 233222          2223223479


Q ss_pred             cEEEEcCCC------h----HHHHHHHHhhccCCeEEEE
Q 019822          224 DYCFECTGV------P----SLLSEALETTKVGKGKVIV  252 (335)
Q Consensus       224 d~vid~~g~------~----~~~~~~~~~l~~~~G~~v~  252 (335)
                      |+|+...+.      .    ..++.+.+.|+++ |.++.
T Consensus       103 D~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             cccceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            999853221      1    2567888899997 98774

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.50  E-value=0.13  Score=34.65  Aligned_cols=65  Identities=14%  Similarity=0.323  Sum_probs=45.9

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHcCCCEEEEEcCCh-hhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          153 SVAVLGLGTVGLG-AVDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       153 ~VlI~G~g~vG~~-ai~la~~~G~~~V~~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      +|-++|-|++|.. ++++++..|+ .|.+.|..+ +..+.++++|+.... .++  +.++          +++|+|+-+.
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~-gh~--~~~i----------~~~d~vV~Ss   68 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFV-PHS--ADNW----------YDPDLVIKTP   68 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEES-SCC--TTSC----------CCCSEEEECT
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEe-eec--cccc----------CCCCEEEEec
Confidence            5777898888875 5788999999 999999876 345568899976433 333  0111          2689988665


Q ss_pred             C
Q 019822          231 G  231 (335)
Q Consensus       231 g  231 (335)
                      .
T Consensus        69 A   69 (89)
T d1j6ua1          69 A   69 (89)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.45  E-value=0.034  Score=47.56  Aligned_cols=44  Identities=30%  Similarity=0.328  Sum_probs=37.6

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 019822          148 VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGK  192 (335)
Q Consensus       148 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~  192 (335)
                      +.+|++|||+|+ |-+|..++..+...|+ +|+++.++.++.+.++
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            567899999987 9999999988888899 9999999887766553

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.45  E-value=0.047  Score=42.06  Aligned_cols=49  Identities=18%  Similarity=0.083  Sum_probs=37.4

Q ss_pred             HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          141 AAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       141 ~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      +|.+....-++++|||+|+|+++.+++..+..  .++|+++.|+.++.+.+
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGG~arai~~aL~~--~~~i~I~nR~~~ka~~l   56 (177)
T d1nvta1           8 ALEEEIGRVKDKNIVIYGAGGAARAVAFELAK--DNNIIIANRTVEKAEAL   56 (177)
T ss_dssp             HHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS--SSEEEEECSSHHHHHHH
T ss_pred             HHHHhCCCcCCCEEEEECCcHHHHHHHHHHcc--ccceeeehhhhhHHHHH
Confidence            34444445688999999999999987766643  44899999998887665

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.43  E-value=0.049  Score=45.31  Aligned_cols=95  Identities=15%  Similarity=0.119  Sum_probs=61.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-C------------c---eEeCCCCCCchhHH
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-M------------T---DFINPDDEPNKSIS  211 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-a------------~---~v~~~~~~~~~~~~  211 (335)
                      ....++|||+|+|. |..+-.+++. ...+|.+++.+++-.+.++++- .            +   .++.      .|..
T Consensus        70 ~~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~------~Da~  141 (276)
T d1mjfa_          70 HPKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI------GDGF  141 (276)
T ss_dssp             SSCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE------SCHH
T ss_pred             CCCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE------ChHH
Confidence            35668999998753 4445555664 4458999999998888877532 1            0   2222      2333


Q ss_pred             HHHHhhhCCCCccEEE-EcCCC---------hHHHHHHHHhhccCCeEEEEEc
Q 019822          212 ELVKGITHGMGVDYCF-ECTGV---------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       212 ~~i~~~~~g~g~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ..+++   .+++|+|| |....         .+.++.+.+.|+++ |.++.-.
T Consensus       142 ~~l~~---~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~  190 (276)
T d1mjfa_         142 EFIKN---NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  190 (276)
T ss_dssp             HHHHH---CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             HHHhc---cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence            44543   34799997 65532         34578899999998 9887654

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.37  E-value=0.09  Score=40.95  Aligned_cols=98  Identities=16%  Similarity=0.150  Sum_probs=63.2

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc----eEeCCCCCCchhHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT----DFINPDDEPNKSISEL  213 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~----~v~~~~~~~~~~~~~~  213 (335)
                      |.+.....++++||=+|+|. |..++.+++ .+. +|++++.++...+.+++    .+..    .++..+.         
T Consensus        44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~---------  111 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL---------  111 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST---------
T ss_pred             HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcch---------
Confidence            55677888999999998864 666666665 455 99999999988777743    2321    1222221         


Q ss_pred             HHhhhCCCCccEEEEcCC---Ch----HHHHHHHHhhccCCeEEEEE
Q 019822          214 VKGITHGMGVDYCFECTG---VP----SLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       214 i~~~~~g~g~d~vid~~g---~~----~~~~~~~~~l~~~~G~~v~~  253 (335)
                      .+.+ ....+|+|+-...   +.    ..++.+.+.|+++ |+++.+
T Consensus       112 ~~~~-~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         112 YENV-KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             TTTC-TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             hhhh-ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence            0111 2347999995322   22    2467778889997 987654

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.33  E-value=0.021  Score=47.26  Aligned_cols=34  Identities=29%  Similarity=0.502  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      +++|+|+|+|..|++++..++..|. +|.+++.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            4789999999999999999999999 999998653

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=94.31  E-value=0.17  Score=38.13  Aligned_cols=90  Identities=12%  Similarity=0.112  Sum_probs=60.7

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHc-CCCEEEEEcCChhhHHHH-HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          153 SVAVLGLGTVGLG-AVDGARMH-GAAKIIGIDKNPWKKEKG-KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       153 ~VlI~G~g~vG~~-ai~la~~~-G~~~V~~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      +|.|+|+|.+|.- .+...+.. +. ++++++.++++.+.+ ++++...+++..+           ++.. .++|+|+-|
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----------~ll~-~~iD~V~I~   69 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCTDYR-----------DVLQ-YGVDAVMIH   69 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCSSTT-----------GGGG-GCCSEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccccHH-----------Hhcc-cccceeccc
Confidence            5789999999854 45555554 55 777888888776665 5677654432221           2222 269999999


Q ss_pred             CCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          230 TGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       230 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      +......+.+..++..+  .=+++.-+.
T Consensus        70 tp~~~H~~~~~~al~~g--k~V~~EKP~   95 (167)
T d1xeaa1          70 AATDVHSTLAAFFLHLG--IPTFVDKPL   95 (167)
T ss_dssp             SCGGGHHHHHHHHHHTT--CCEEEESCS
T ss_pred             ccccccccccccccccc--cccccCCCC
Confidence            98877788888888874  446665444

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.30  E-value=0.13  Score=38.17  Aligned_cols=40  Identities=18%  Similarity=0.253  Sum_probs=32.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  193 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  193 (335)
                      +|-|+|.|.+|...+.-++..|. +|++.++++.+....+.
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~   41 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERA   41 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhh
Confidence            57889999999999999988999 99998877666555443

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.30  E-value=0.054  Score=43.69  Aligned_cols=103  Identities=17%  Similarity=0.087  Sum_probs=64.3

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC----CceEeCCCCCCchhHHHHHHhhhC
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG----MTDFINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg----a~~v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      +...++||++||=+|+|+ |..+..+++......|++++.+++..+.+++.-    ....+......+..    ...  .
T Consensus        68 ~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~----~~~--~  140 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE----YAN--I  140 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG----GTT--T
T ss_pred             HhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcc----ccc--c
Confidence            446689999999999864 778888888754449999999998888775532    11222222101111    111  1


Q ss_pred             CCCccEEEEcCCC----hHHHHHHHHhhccCCeEEEEEc
Q 019822          220 GMGVDYCFECTGV----PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       220 g~g~d~vid~~g~----~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ...+|+++..+..    ...+..+.+.|+++ |+++..-
T Consensus       141 ~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~~  178 (230)
T d1g8sa_         141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIAI  178 (230)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEEe
Confidence            1245666654432    22467778889997 9887663

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.18  E-value=0.099  Score=42.62  Aligned_cols=35  Identities=9%  Similarity=0.104  Sum_probs=29.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK  188 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~  188 (335)
                      ..||+|+ +++|.+.+..+...|+ +|+.++++.++.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~   38 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGA   38 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHH
Confidence            4578887 8999999999999999 999999876543

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=94.14  E-value=0.021  Score=45.81  Aligned_cols=94  Identities=20%  Similarity=0.252  Sum_probs=62.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHH---cCCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCchhHHHHHHhh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARM---HGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~---~G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ..++.+||-+|+|+ |..+..+++.   .++ +|+++|.|++-++.+++    .+..   +..+.+.          .++
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~----------~~~  104 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDI----------RHV  104 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCT----------TTC
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccchh----------hcc
Confidence            67899999999864 7777777775   467 99999999998888754    2321   1222211          112


Q ss_pred             hCCCCccEEEEcCCC--------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          218 THGMGVDYCFECTGV--------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       218 ~~g~g~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .. ..+|+++-....        ...++.+.+.|+++ |.++....
T Consensus       105 ~~-~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~~  148 (225)
T d1im8a_         105 EI-KNASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSEK  148 (225)
T ss_dssp             CC-CSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cc-ccceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeecccc
Confidence            12 256777653321        24688999999998 99988743

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.10  E-value=0.11  Score=43.25  Aligned_cols=97  Identities=13%  Similarity=0.055  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC----------ceEeCCCCCCchhHHHHHHhh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM----------TDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga----------~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ....++|||+|+|. |..+-.+++..+..+|.+++-+++-.+.++++-.          -.++.      .|..+.+++.
T Consensus        76 ~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~------~Da~~~l~~~  148 (285)
T d2o07a1          76 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV------GDGFEFMKQN  148 (285)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHHHTC
T ss_pred             CcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE------ccHHHHHhcC
Confidence            45668999998754 5566677787776699999999988888766420          11221      2344455542


Q ss_pred             hCCCCccEEE-EcCC---------ChHHHHHHHHhhccCCeEEEEEc
Q 019822          218 THGMGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       218 ~~g~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                        .+.+|+|+ |...         +.+.++.+.+.|+++ |.++.-.
T Consensus       149 --~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  192 (285)
T d2o07a1         149 --QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  192 (285)
T ss_dssp             --SSCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             --CCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEec
Confidence              34799997 6442         123577888899998 9887754

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.03  E-value=0.019  Score=48.79  Aligned_cols=97  Identities=21%  Similarity=0.277  Sum_probs=56.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH---HHhcCCc---eEeCCCCCCchhHHHHHH
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEK---GKAFGMT---DFINPDDEPNKSISELVK  215 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~---~~~lga~---~v~~~~~~~~~~~~~~i~  215 (335)
                      +.+.....++++||-+|+| .|.+++.+|+ .|+++|++++.++.-...   .++.+..   .++..+.          .
T Consensus        27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~----------~   94 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKI----------E   94 (311)
T ss_dssp             HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCT----------T
T ss_pred             HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeH----------H
Confidence            3334466789999999987 4666666665 587799999988754322   2333321   2332221          1


Q ss_pred             hh-hCCCCccEEEE-cCC----ChHHHH----HHHHhhccCCeEEE
Q 019822          216 GI-THGMGVDYCFE-CTG----VPSLLS----EALETTKVGKGKVI  251 (335)
Q Consensus       216 ~~-~~g~g~d~vid-~~g----~~~~~~----~~~~~l~~~~G~~v  251 (335)
                      ++ .....+|+|+. ..+    .+..+.    ..-+.|+++ |+++
T Consensus        95 ~l~~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~-G~ii  139 (311)
T d2fyta1          95 EVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKG-GSVY  139 (311)
T ss_dssp             TSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEE-EEEE
T ss_pred             HhcCccccceEEEEeeeeeecccccccHHHHHHHHhcCCCC-cEEe
Confidence            11 12347999985 222    221222    334568897 8875

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=93.97  E-value=0.033  Score=43.45  Aligned_cols=39  Identities=33%  Similarity=0.417  Sum_probs=34.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      ++|.|+|+|.+|...+.++...|+ +|+..+.+++..+.+
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            579999999999999988889999 999999999876654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.97  E-value=0.18  Score=34.44  Aligned_cols=70  Identities=13%  Similarity=0.200  Sum_probs=48.6

Q ss_pred             CCCCCEEEEEcCCHHHHHH-HHHHHHcCCCEEEEEcCCh-hhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccE
Q 019822          148 VEKGSSVAVLGLGTVGLGA-VDGARMHGAAKIIGIDKNP-WKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~a-i~la~~~G~~~V~~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      ....+++.++|.|++|..+ +++++..|+ +|.+.|... ...+.+++.|.. +...+.   ...   +      .+.|+
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~-v~~g~~---~~~---i------~~~d~   70 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAK-IYIGHA---EEH---I------EGASV   70 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCE-EEESCC---GGG---G------TTCSE
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCe-EEECCc---ccc---C------CCCCE
Confidence            3566889999988888665 899999999 999999764 344556778875 333333   211   1      26788


Q ss_pred             EEEcCC
Q 019822          226 CFECTG  231 (335)
Q Consensus       226 vid~~g  231 (335)
                      |+-+.+
T Consensus        71 vV~S~A   76 (96)
T d1p3da1          71 VVVSSA   76 (96)
T ss_dssp             EEECTT
T ss_pred             EEECCC
Confidence            886554

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=93.88  E-value=0.079  Score=44.67  Aligned_cols=98  Identities=15%  Similarity=0.082  Sum_probs=65.2

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc----------eEeCCCCCCchhHHHHHHhh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT----------DFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~----------~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ....++|||+|+|. |..+-.++++....+|.+++.+++-.+.++++-..          .++.      .|..+.+++.
T Consensus       104 ~~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i------~Da~~~l~~~  176 (312)
T d2b2ca1         104 HPDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC------GDGFEFLKNH  176 (312)
T ss_dssp             SSSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC------SCHHHHHHHC
T ss_pred             CCCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEE------chHHHHHHhC
Confidence            34568999998764 55666777877766999999999988888774210          1221      2344556542


Q ss_pred             hCCCCccEEE-EcCC---------ChHHHHHHHHhhccCCeEEEEEcc
Q 019822          218 THGMGVDYCF-ECTG---------VPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       218 ~~g~g~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                        .+.+|+|| |...         +.+.++.+.+.|+++ |.++.-+.
T Consensus       177 --~~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~  221 (312)
T d2b2ca1         177 --KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE  221 (312)
T ss_dssp             --TTCEEEEEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred             --CCCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence              34799998 4332         123567888899997 98887643

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.70  E-value=0.053  Score=41.72  Aligned_cols=38  Identities=29%  Similarity=0.319  Sum_probs=33.6

Q ss_pred             EEEEE-cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019822          153 SVAVL-GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       153 ~VlI~-G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~  191 (335)
                      +|.|+ |+|.+|.+.++.+...|+ +|++.+|++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            57888 569999999999999999 999999999887665

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.70  E-value=0.37  Score=35.03  Aligned_cols=28  Identities=29%  Similarity=0.368  Sum_probs=21.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHH-cCCCEEEEE
Q 019822          153 SVAVLGL-GTVGLGAVDGARM-HGAAKIIGI  181 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~-~G~~~V~~~  181 (335)
                      +|.|.|+ |-+|.++++.... -++ ++.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEE
Confidence            5889997 9999999888765 456 55543

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.69  E-value=0.36  Score=36.65  Aligned_cols=101  Identities=22%  Similarity=0.251  Sum_probs=59.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC-C-hhhHHHHHhcCCceEeCCCCCCchhHHH-------HHHhhhCCCCc
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDK-N-PWKKEKGKAFGMTDFINPDDEPNKSISE-------LVKGITHGMGV  223 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~-~-~~~~~~~~~lga~~v~~~~~~~~~~~~~-------~i~~~~~g~g~  223 (335)
                      +|.|.|-|.+|+.+.+++...+--+++++.. + ......+..++.+......+ ....+..       .+.++.  .++
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~v~g~~~~~~--~~v   79 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPE-RVKLFEKAGIEVAGTVDDML--DEA   79 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGG-GHHHHHHTTCCCCEEHHHHH--HTC
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccc-cceeecccCcccCCChhHhh--cCC
Confidence            6889999999999999887655226665542 2 23344555555443222111 0000100       011111  269


Q ss_pred             cEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          224 DYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       224 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      |+|+||+|.-...+.+-..+..+ -+.+..+...
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~~  112 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKG-IKAIFQGGEK  112 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTT-CEEEECTTSC
T ss_pred             CEEEEccCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence            99999999765667777788886 7877776554

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.66  E-value=0.045  Score=45.93  Aligned_cols=97  Identities=13%  Similarity=0.130  Sum_probs=64.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC----------ceEeCCCCCCchhHHHHHHhhh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM----------TDFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga----------~~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ...++|||+|+|. |..+-.++++.+..+|.+++.+++-.+.++++-.          -.++.      .|..+.+++. 
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~~-  159 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI------ANGAEYVRKF-  159 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE------SCHHHHGGGC-
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh------hhHHHHHhcC-
Confidence            4568999998754 4566677777776699999999988888766421          02221      2344555543 


Q ss_pred             CCCCccEEE-EcCC----------ChHHHHHHHHhhccCCeEEEEEcc
Q 019822          219 HGMGVDYCF-ECTG----------VPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       219 ~g~g~d~vi-d~~g----------~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                       .+.+|+|| |+..          +.+.++.+.+.|+++ |.++.-..
T Consensus       160 -~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~  205 (295)
T d1inla_         160 -KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE  205 (295)
T ss_dssp             -SSCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             -CCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence             34799997 5432          234677889999998 98877643

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=93.64  E-value=0.12  Score=42.53  Aligned_cols=93  Identities=16%  Similarity=0.070  Sum_probs=64.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHhcCCc--eEe-CCCCCCchhHHHHHHhhhCCCCc
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMH-GAAKIIGIDKNPWKKEKGKAFGMT--DFI-NPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~~~~~~~~~~~lga~--~v~-~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      ..++.+||=+|+|. |..+..+++.. +. ++++++.+++..+.+++....  .+. +..+   .       .+ ....+
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~---l-------~~-~~~sf  148 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHR---L-------PF-SDTSM  148 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTS---C-------SB-CTTCE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeehhh---c-------cC-CCCCE
Confidence            45778999999874 77777888775 45 999999999998888664322  111 2221   1       11 12369


Q ss_pred             cEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          224 DYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       224 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      |+|+....-. .+.++.+.|+++ |+++....
T Consensus       149 D~v~~~~~~~-~~~e~~rvLkpg-G~l~~~~p  178 (268)
T d1p91a_         149 DAIIRIYAPC-KAEELARVVKPG-GWVITATP  178 (268)
T ss_dssp             EEEEEESCCC-CHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEEeecCCHH-HHHHHHHHhCCC-cEEEEEee
Confidence            9999755433 678999999998 99988754

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.61  E-value=0.046  Score=44.87  Aligned_cols=32  Identities=16%  Similarity=0.279  Sum_probs=28.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      +|||+|+ |-+|..++..++..|+ +|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence            5899997 9999999999999999 999998753

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.58  E-value=0.25  Score=37.86  Aligned_cols=97  Identities=19%  Similarity=0.231  Sum_probs=56.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCC-h-hhHHHHHhcCCceEeCCCC--------CC-chhHHHHHHhhhCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKN-P-WKKEKGKAFGMTDFINPDD--------EP-NKSISELVKGITHG  220 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~-~-~~~~~~~~lga~~v~~~~~--------~~-~~~~~~~i~~~~~g  220 (335)
                      +|.|.|.|.+|+.+++.+.... . +++++... + .....+...+.......+.        .. ...+.    +..  
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~----~~~--   75 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVE----DLI--   75 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHH----HHH--
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchh----hhh--
Confidence            5889999999999999998654 5 77776432 2 2233333333222111110        00 00111    111  


Q ss_pred             CCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          221 MGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       221 ~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .++|+|+||+|.-...+.+-..+..+ -+++..+...
T Consensus        76 ~~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~~~  111 (178)
T d1b7go1          76 KTSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGGEK  111 (178)
T ss_dssp             HHCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTTSC
T ss_pred             hcCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECCCC
Confidence            16899999999765566777777775 5777665443

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.069  Score=42.69  Aligned_cols=109  Identities=17%  Similarity=0.148  Sum_probs=68.8

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----hcCCceEeCCCCCCchhHHHHHHhh
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGK----AFGMTDFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~  217 (335)
                      ....+....++||-+|.+ .|..++.+|+.+.. .+|+.++.+++..+.++    +.|....+....   .+..+.+.++
T Consensus        52 ~~L~~~~~~k~vLEiGt~-~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~---Gda~e~l~~~  127 (219)
T d2avda1          52 ANLARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALETLDEL  127 (219)
T ss_dssp             HHHHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHH
T ss_pred             HHHHHccCCCeEEEEech-hhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEE---eehhhcchhh
Confidence            344556778899999975 37788888887642 39999999998766654    345332222221   3333444333


Q ss_pred             h---CCCCccEEE-EcCC--ChHHHHHHHHhhccCCeEEEEEccC
Q 019822          218 T---HGMGVDYCF-ECTG--VPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       218 ~---~g~g~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .   ....||+|| |+--  ....++.+++.|+++ |.++.=...
T Consensus       128 ~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~Dn~l  171 (219)
T d2avda1         128 LAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLRVL  171 (219)
T ss_dssp             HHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEECCS
T ss_pred             hhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEeCCc
Confidence            2   223699998 4332  234578999999997 777665443

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=93.45  E-value=0.035  Score=41.52  Aligned_cols=85  Identities=6%  Similarity=-0.090  Sum_probs=51.9

Q ss_pred             EEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCCChH
Q 019822          155 AVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPS  234 (335)
Q Consensus       155 lI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g~~~  234 (335)
                      =++|+|.+|.+.+..++..+. .+.+..|+.++.+.+.+.+.....+..+            ..  +..|+||-|+... 
T Consensus         3 gfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~------------~~--~~~DiVil~v~d~-   66 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEK------------HP--ELNGVVFVIVPDR-   66 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCC------------CC--C---CEEECSCTT-
T ss_pred             EEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhh------------hh--ccCcEEEEeccch-
Confidence            367999999998887765333 4467889999988886665433322222            11  2579999999866 


Q ss_pred             HHHHHHHhhccCCeEEEEEcc
Q 019822          235 LLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       235 ~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .+..++..+...+..++.++.
T Consensus        67 ~i~~v~~~l~~~~~ivi~~s~   87 (153)
T d2i76a2          67 YIKTVANHLNLGDAVLVHCSG   87 (153)
T ss_dssp             THHHHHTTTCCSSCCEEECCS
T ss_pred             hhhHHHhhhcccceeeeeccc
Confidence            667788888654134455543

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.43  E-value=0.044  Score=45.90  Aligned_cols=37  Identities=19%  Similarity=0.294  Sum_probs=32.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ....++|+|+|+|..|+.++..++..|. +|.+++.++
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            4556799999999999999999988999 999999654

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.35  E-value=0.2  Score=42.33  Aligned_cols=101  Identities=19%  Similarity=0.197  Sum_probs=63.3

Q ss_pred             cCCCCCCEEEEEcC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCC--c--eEeCCCCCCchhHHHHHH
Q 019822          146 AKVEKGSSVAVLGL--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM--T--DFINPDDEPNKSISELVK  215 (335)
Q Consensus       146 ~~~~~~~~VlI~G~--g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga--~--~v~~~~~~~~~~~~~~i~  215 (335)
                      ..+.+|++||=+.+  |+.+   +.++ ..|++.|+.++.++...+.+++    .|.  +  ..+..+      ..+.++
T Consensus       140 ~~~~~g~~VLdlf~~~G~~s---l~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d------~~~~l~  209 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFS---VAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMD------VFDYFK  209 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHH---HHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESC------HHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHH---HHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEcc------HHHHHH
Confidence            45778999998854  5444   3333 4677789999999988877643    232  1  223233      333343


Q ss_pred             hh-hCCCCccEEE-EcCCC--------------hHHHHHHHHhhccCCeEEEEEccCC
Q 019822          216 GI-THGMGVDYCF-ECTGV--------------PSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       216 ~~-~~g~g~d~vi-d~~g~--------------~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .. ..++.||+|| |.-..              ..++..+++.++++ |.++......
T Consensus       210 ~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~scs~  266 (317)
T d2b78a2         210 YARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTNAA  266 (317)
T ss_dssp             HHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEECCT
T ss_pred             HHHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCCc
Confidence            32 2355899997 53211              13566788899997 9998876543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.29  E-value=0.038  Score=44.55  Aligned_cols=37  Identities=19%  Similarity=0.195  Sum_probs=32.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK  188 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~  188 (335)
                      ++++||+|+ +++|.+.++.+...|+ +|+.+++++++.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~   38 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGE   38 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcccc
Confidence            468899987 9999999999999999 999999876643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.29  E-value=0.055  Score=43.52  Aligned_cols=37  Identities=22%  Similarity=0.184  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      ..+++|+|+|+|+.|+.++..++..|+ +|.+++.+++
T Consensus        47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             cCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence            467899999999999999999999999 9999986653

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.28  E-value=0.16  Score=42.12  Aligned_cols=77  Identities=18%  Similarity=0.253  Sum_probs=45.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCC--EEEEEcCChhhHHH----HHhcC---Cc-e--EeCCCCCCchhHHHHHHhhhC
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAA--KIIGIDKNPWKKEK----GKAFG---MT-D--FINPDDEPNKSISELVKGITH  219 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~--~V~~~~~~~~~~~~----~~~lg---a~-~--v~~~~~~~~~~~~~~i~~~~~  219 (335)
                      .|||+|+ +++|.+.+..+...|++  .|+.+.++.++.+.    ++++.   .. .  ..|-.+  ..+....+.+...
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~   81 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD--SKSVAAARERVTE   81 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC--HHHHHHHHHTCTT
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccc--hHhhhhhhhhccc
Confidence            4567787 99999999999889983  23444444433322    23332   21 1  234333  2344444455445


Q ss_pred             CCCccEEEEcCCC
Q 019822          220 GMGVDYCFECTGV  232 (335)
Q Consensus       220 g~g~d~vid~~g~  232 (335)
                      | .+|+++++.|.
T Consensus        82 g-~idilvnnag~   93 (285)
T d1jtva_          82 G-RVDVLVCNAGL   93 (285)
T ss_dssp             S-CCSEEEECCCC
T ss_pred             c-chhhhhhcccc
Confidence            5 79999998764

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.26  E-value=0.16  Score=42.97  Aligned_cols=101  Identities=12%  Similarity=0.082  Sum_probs=62.2

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce--EeCCCCCCchhHHHHHHhhhCCC
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD--FINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      ..++++||=+++|+ |..++.+|+ .+. +|++++.++...+.+++    .|.+.  .+..+.   .++.+.+..  .+.
T Consensus       143 ~~~g~rVLDl~~gt-G~~s~~~a~-g~~-~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~---~~~~~~~~~--~~~  214 (318)
T d1wxxa2         143 RFRGERALDVFSYA-GGFALHLAL-GFR-EVVAVDSSAEALRRAEENARLNGLGNVRVLEANA---FDLLRRLEK--EGE  214 (318)
T ss_dssp             GCCEEEEEEETCTT-THHHHHHHH-HEE-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCH---HHHHHHHHH--TTC
T ss_pred             HhCCCeeeccCCCC-cHHHHHHHh-cCC-cEEeecchHHHHHHHHHHHHHcCCCCcceeeccH---HHHhhhhHh--hhc
Confidence            45789999887643 444455554 244 99999999998887743    45432  222222   233333322  345


Q ss_pred             CccEEE-Ec--CC--C----------hHHHHHHHHhhccCCeEEEEEccCC
Q 019822          222 GVDYCF-EC--TG--V----------PSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       222 g~d~vi-d~--~g--~----------~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .||+|+ |.  .+  .          ..++..+++.|+++ |.++.+....
T Consensus       215 ~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~scs~  264 (318)
T d1wxxa2         215 RFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCSH  264 (318)
T ss_dssp             CEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECCT
T ss_pred             CCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCCc
Confidence            899998 42  11  1          12456778889997 9998886643

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.25  E-value=0.14  Score=39.05  Aligned_cols=43  Identities=23%  Similarity=0.247  Sum_probs=37.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGM  196 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga  196 (335)
                      +|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+.+.++
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            47788999999998888888899 99999999999988866553

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.21  E-value=0.16  Score=38.94  Aligned_cols=91  Identities=16%  Similarity=0.203  Sum_probs=61.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc-CCCEEEEE-cCChhhHHH-HHhcCCc---eEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          153 SVAVLGLGTVGLGAVDGARMH-GAAKIIGI-DKNPWKKEK-GKAFGMT---DFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~-G~~~V~~~-~~~~~~~~~-~~~lga~---~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      ++.|+|+|.+|...+..++.. +. +++++ ++++++.+. .++++..   .++       .++.+.+.    ...+|+|
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ll~----~~~iD~v   70 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH-------GSYESLLE----DPEIDAL   70 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE-------SSHHHHHH----CTTCCEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec-------CcHHHhhh----cccccee
Confidence            578999999999888888776 56 77655 666666544 4566632   222       22333332    3379999


Q ss_pred             EEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          227 FECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       227 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      +-++.....++.+..++..+  .=+.+.-+.
T Consensus        71 ~I~tp~~~h~~~~~~~l~~g--~~v~~EKP~   99 (184)
T d1ydwa1          71 YVPLPTSLHVEWAIKAAEKG--KHILLEKPV   99 (184)
T ss_dssp             EECCCGGGHHHHHHHHHTTT--CEEEECSSC
T ss_pred             eecccchhhcchhhhhhhcc--ceeeccccc
Confidence            99998887888888888874  555665443

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.08  E-value=0.27  Score=37.59  Aligned_cols=85  Identities=9%  Similarity=-0.056  Sum_probs=49.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcCCceE----eCCCC-CCchhHHHHHHhhhCCCCccE
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFGMTDF----INPDD-EPNKSISELVKGITHGMGVDY  225 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lga~~v----~~~~~-~~~~~~~~~i~~~~~g~g~d~  225 (335)
                      +|.|+|+|..|.+.+..+...|. +|....+..+  ..+.+.+......    +.... ....+..+.+      ++.|+
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~ad~   74 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL------ENAEV   74 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH------TTCSE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH------hccch
Confidence            58899999999999988888888 9999987433  2333322111000    00000 0002222222      25899


Q ss_pred             EEEcCCChHHHHHHHHhhcc
Q 019822          226 CFECTGVPSLLSEALETTKV  245 (335)
Q Consensus       226 vid~~g~~~~~~~~~~~l~~  245 (335)
                      |+-++... .++..++.+.+
T Consensus        75 Ii~avps~-~~~~~~~~l~~   93 (180)
T d1txga2          75 VLLGVSTD-GVLPVMSRILP   93 (180)
T ss_dssp             EEECSCGG-GHHHHHHHHTT
T ss_pred             hhcccchh-hhHHHHHhhcc
Confidence            99999876 45555554443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=93.02  E-value=0.25  Score=40.58  Aligned_cols=35  Identities=23%  Similarity=0.246  Sum_probs=30.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      +.++|||+|+ |-+|..++..+...|. +|+++.|++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~   37 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE   37 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence            3467999997 9999999998888998 999998764

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=92.96  E-value=0.11  Score=36.81  Aligned_cols=64  Identities=8%  Similarity=0.037  Sum_probs=42.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHc---CCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMH---GAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~---G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .+++++|+|+|.+|.-++.++..+   |. +|..+.+++.            ++...+   ++....+++....+|+++.
T Consensus        17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~~~------------il~~~d---~~~~~~~~~~l~~~GI~v~   80 (117)
T d1feca2          17 APKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGDM------------ILRGFD---SELRKQLTEQLRANGINVR   80 (117)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSSS------------SSTTSC---HHHHHHHHHHHHHTTEEEE
T ss_pred             cCCeEEEECCChHHHHHHHHhHhhccccc-ccceeccccc------------cccccc---chhhHHHHHHHhhCcEEEE
Confidence            357999999999999888776544   67 8988886431            222222   4455556555555577777


Q ss_pred             EEc
Q 019822          227 FEC  229 (335)
Q Consensus       227 id~  229 (335)
                      .++
T Consensus        81 ~~~   83 (117)
T d1feca2          81 THE   83 (117)
T ss_dssp             ETC
T ss_pred             cCC
Confidence            654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.89  E-value=0.14  Score=36.30  Aligned_cols=66  Identities=11%  Similarity=0.037  Sum_probs=45.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCC--EEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAA--KIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~--~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      ..+++++|+|+|.+|.-++..+..+|.+  +|..+.+.+            +++...+   .+..+.+++....+|+++.
T Consensus        18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~------------~iL~~~d---~~~~~~l~~~l~~~GV~v~   82 (117)
T d1aoga2          18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE------------MILRGFD---HTLREELTKQLTANGIQIL   82 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS------------SSSTTSC---HHHHHHHHHHHHHTTCEEE
T ss_pred             hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc------------hhhcccc---hHHHHHHHHHHHhcCcEEE
Confidence            3457999999999999988887776642  688887542            2222222   5566666666666688888


Q ss_pred             EEc
Q 019822          227 FEC  229 (335)
Q Consensus       227 id~  229 (335)
                      .++
T Consensus        83 ~~~   85 (117)
T d1aoga2          83 TKE   85 (117)
T ss_dssp             ESC
T ss_pred             cCC
Confidence            865

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.84  E-value=0.018  Score=48.98  Aligned_cols=93  Identities=23%  Similarity=0.214  Sum_probs=54.4

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH---HHHhcCCc---eEeCCCCCCchhHHHHHHhhhCC
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE---KGKAFGMT---DFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~---~~~~lga~---~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      .+.++++||-+|+|. |.+++.+|+ .|+++|++++.++.-..   .+++.+..   .++..+.   .++      ....
T Consensus        30 ~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~---~~~------~~~~   98 (316)
T d1oria_          30 HLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV---EEV------ELPV   98 (316)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCT---TTC------CCSS
T ss_pred             ccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccH---HHc------cccc
Confidence            456899999999875 776666665 68779999998764222   22333422   2222222   111      1123


Q ss_pred             CCccEEEE-cCC----C----hHHHHHHHHhhccCCeEEE
Q 019822          221 MGVDYCFE-CTG----V----PSLLSEALETTKVGKGKVI  251 (335)
Q Consensus       221 ~g~d~vid-~~g----~----~~~~~~~~~~l~~~~G~~v  251 (335)
                      ..+|+|+. ..+    .    +..+...-+.|+++ |+++
T Consensus        99 ~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_          99 EKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             SCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             ceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            47899974 222    1    22445556789997 8875

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.82  E-value=0.35  Score=37.69  Aligned_cols=40  Identities=25%  Similarity=0.414  Sum_probs=35.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  193 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  193 (335)
                      +|.|+|.|-+|+..+..+...|. +|+++|.++++.+.+.+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcc
Confidence            47889999999998888888999 99999999998888765

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=92.82  E-value=0.21  Score=42.24  Aligned_cols=72  Identities=17%  Similarity=0.151  Sum_probs=44.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC----ChhhHHHHHhc---CCceE-eCCCCCCchhHHHHHHhhhCCCCc
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK----NPWKKEKGKAF---GMTDF-INPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~----~~~~~~~~~~l---ga~~v-~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      +|||+|+ |-+|..++..+...|. +|+++++    ........+.+   +...+ .|-.+  ...+.+.+++    .++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~l~~~~~~----~~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN--EALMTEILHD----HAI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC--HHHHHHHHHH----TTC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCC--HHHHHHHHhc----cCC
Confidence            5999987 9999999999999999 9999864    22222332222   23222 22222  1223333332    379


Q ss_pred             cEEEEcCC
Q 019822          224 DYCFECTG  231 (335)
Q Consensus       224 d~vid~~g  231 (335)
                      |+||.+.+
T Consensus        75 d~ViHlAa   82 (338)
T d1udca_          75 DTVIHFAG   82 (338)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCC
Confidence            99999764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.75  E-value=0.056  Score=44.11  Aligned_cols=33  Identities=18%  Similarity=0.331  Sum_probs=29.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .|+|+|+|..|++++.+++..|..+|.++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            689999999999999999999965888888764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.70  E-value=0.1  Score=38.00  Aligned_cols=38  Identities=18%  Similarity=0.278  Sum_probs=33.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .+.++++|+|+|+|.+|.-++..++..|. +|..+++.+
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence            35677999999999999999999999999 999999754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=92.68  E-value=0.14  Score=43.89  Aligned_cols=33  Identities=18%  Similarity=0.253  Sum_probs=28.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      +.|||+|+ |-+|..++..+...|. +|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            57899987 9999999999999999 999999854

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.67  E-value=0.046  Score=45.30  Aligned_cols=33  Identities=21%  Similarity=0.249  Sum_probs=30.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      .|+|+|+|++|++++..++..|. +|.+++++++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            58999999999999999999999 9999997653

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=92.67  E-value=0.25  Score=38.34  Aligned_cols=39  Identities=15%  Similarity=0.266  Sum_probs=33.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE  189 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~  189 (335)
                      .++++.|+|.|.+|...+++++.+|. +|++.++......
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~   84 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSS   84 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHH
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccc
Confidence            47899999999999999999999999 9999987654333

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.63  E-value=0.081  Score=42.49  Aligned_cols=35  Identities=23%  Similarity=0.322  Sum_probs=31.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      ...++|+|+|+|..|++++..+...|. +|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            455689999999999999999999999 99999864

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=92.61  E-value=0.096  Score=42.49  Aligned_cols=40  Identities=30%  Similarity=0.320  Sum_probs=33.4

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      ....--.+.+|+|.|.|.||..+++++...|+ +|++++.+
T Consensus        24 ~~~~~l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD~   63 (242)
T d1v9la1          24 KLWGGIEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSDI   63 (242)
T ss_dssp             HHHSCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEECS
T ss_pred             HcCCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeecc
Confidence            33344578999999999999999999999999 88887743

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.58  E-value=0.089  Score=44.43  Aligned_cols=32  Identities=16%  Similarity=0.186  Sum_probs=29.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      +++||+|+ |-+|..++..+...|+ +|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57899997 9999999999999999 99999974

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.53  E-value=0.051  Score=43.64  Aligned_cols=33  Identities=21%  Similarity=0.390  Sum_probs=28.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .|+|+|+|..|+.++..++..|.++|.++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            489999999999999999989975799998754

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=92.41  E-value=0.65  Score=36.23  Aligned_cols=105  Identities=15%  Similarity=0.136  Sum_probs=67.5

Q ss_pred             hhHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceE--eCCCCCCchhHH
Q 019822          138 GYGAAWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF--INPDDEPNKSIS  211 (335)
Q Consensus       138 a~~~l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~v--~~~~~~~~~~~~  211 (335)
                      -|..++..    +...||=+|+|. |..++.+|+..--..+++++.++...+.+    ++.+.+.|  +..+.   ..+ 
T Consensus        21 ~w~~~F~~----~~PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da---~~l-   91 (204)
T d2fcaa1          21 KWNTVFGN----DNPIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDA---DTL-   91 (204)
T ss_dssp             CHHHHHTS----CCCEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCG---GGH-
T ss_pred             HHHHHcCC----CCceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccch---hhh-
Confidence            35555432    334567779875 88999999986444999999999877665    44565433  33332   222 


Q ss_pred             HHHHhhhCCCCccEEEEcCCC--------------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          212 ELVKGITHGMGVDYCFECTGV--------------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       212 ~~i~~~~~g~g~d~vid~~g~--------------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                        ...+..+ .+|.|+-....              +..+..+.+.|+++ |.+....+
T Consensus        92 --~~~~~~~-~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~TD  145 (204)
T d2fcaa1          92 --TDVFEPG-EVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFKTD  145 (204)
T ss_dssp             --HHHCCTT-SCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEEES
T ss_pred             --hcccCch-hhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEEEC
Confidence              2223333 68887644332              24788899999998 99887744

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=92.39  E-value=0.24  Score=38.31  Aligned_cols=46  Identities=13%  Similarity=0.197  Sum_probs=37.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG  195 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg  195 (335)
                      -.+.+|.|+|.|.+|...+++++.+|. +|+..++........++.+
T Consensus        42 l~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~   87 (188)
T d2naca1          42 LEAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELN   87 (188)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHT
T ss_pred             ccccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccc
Confidence            357899999999999999999999999 9999997655554544444

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.39  E-value=0.15  Score=36.81  Aligned_cols=27  Identities=15%  Similarity=0.282  Sum_probs=22.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEE
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIG  180 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~  180 (335)
                      +|.|+|+ |-+|++..+++...+. +++.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~-~l~~   29 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGH-ELVL   29 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCC-eEEE
Confidence            5889997 9999999999998888 5543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=92.38  E-value=0.78  Score=33.64  Aligned_cols=76  Identities=11%  Similarity=0.020  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HH---HhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKE-KG---KAFGMTDFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~-~~---~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      .+.++|.|.|.+|..+++.+...|. +|++++.++++.. .+   ...|...+ ..+.   .+ ...+++. +=..++.+
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi-~Gd~---~d-~~~L~~a-~i~~a~~v   75 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVI-PGDS---ND-SSVLKKA-GIDRCRAI   75 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEE-ESCT---TS-HHHHHHH-TTTTCSEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEE-EccC---cc-hHHHHHh-ccccCCEE
Confidence            3578999999999999999999999 8888887775432 22   33455433 3332   11 2233333 23368999


Q ss_pred             EEcCCCh
Q 019822          227 FECTGVP  233 (335)
Q Consensus       227 id~~g~~  233 (335)
                      +-+++..
T Consensus        76 i~~~~~d   82 (153)
T d1id1a_          76 LALSDND   82 (153)
T ss_dssp             EECSSCH
T ss_pred             EEccccH
Confidence            9888765

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.32  E-value=0.29  Score=41.47  Aligned_cols=38  Identities=18%  Similarity=0.191  Sum_probs=32.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKK  188 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~  188 (335)
                      +.++|||+|+ |.+|..++..+...|. +|+++.|+.++.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~   40 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGL   40 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchh
Confidence            4678999987 9999999999999999 999998876543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=92.28  E-value=0.071  Score=41.92  Aligned_cols=35  Identities=34%  Similarity=0.514  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .+++|.|+|.|.+|..++++++.+|+ +|++.++..
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~   78 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYP   78 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCcc
Confidence            46899999999999999999999999 999999754

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=92.24  E-value=0.12  Score=41.15  Aligned_cols=94  Identities=13%  Similarity=0.061  Sum_probs=58.8

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCc--eEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMT--DFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~--~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      ....++++||=+|+|. |..+..+++ .|. +|++++.+++..+.+++...+  ..+....          ........+
T Consensus        16 ~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~----------~~~~~~~~f   82 (225)
T d2p7ia1          16 TPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRF----------EDAQLPRRY   82 (225)
T ss_dssp             GGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCG----------GGCCCSSCE
T ss_pred             hhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccccccccc----------ccccccccc
Confidence            4445677899999865 666666654 577 899999999999998764322  2222211          112223379


Q ss_pred             cEEEEcC-----CCh-HHHHHHH-HhhccCCeEEEEE
Q 019822          224 DYCFECT-----GVP-SLLSEAL-ETTKVGKGKVIVI  253 (335)
Q Consensus       224 d~vid~~-----g~~-~~~~~~~-~~l~~~~G~~v~~  253 (335)
                      |+|+..-     ..+ ..+..+. ++|+++ |.++..
T Consensus        83 D~I~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          83 DNIVLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             EEEEEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             ccccccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            9998532     122 2345665 568897 877664

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.15  E-value=0.21  Score=37.77  Aligned_cols=94  Identities=18%  Similarity=0.210  Sum_probs=62.7

Q ss_pred             ccccchhhhhHHHHHhcC-CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCc
Q 019822          130 FLSCGFTTGYGAAWKEAK-VEKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPN  207 (335)
Q Consensus       130 ~l~~~~~ta~~~l~~~~~-~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~  207 (335)
                      .++|.....+. +.+..+ .-.|++|+|+|- ..+|.-++.|+...|+ +|+.+....                      
T Consensus        16 ~~PcTp~aI~~-lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t----------------------   71 (166)
T d1b0aa1          16 LRPCTPRGIVT-LLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT----------------------   71 (166)
T ss_dssp             SCCHHHHHHHH-HHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC----------------------
T ss_pred             CCCchHHHHHH-HHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-ccccccccc----------------------
Confidence            34544333333 334444 357999999996 7899999999999999 888776321                      


Q ss_pred             hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .+..+.++      .+|+++.++|.+..+.  .+.++++ ..++++|..
T Consensus        72 ~~l~~~~~------~ADivI~a~G~p~~i~--~~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          72 KNLRHHVE------NADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             SCHHHHHH------HCSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred             chhHHHHh------hhhHhhhhccCccccc--ccccCCC-cEEEecCce
Confidence            22222332      5799999999875433  3456776 788888764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.08  E-value=0.089  Score=43.91  Aligned_cols=36  Identities=22%  Similarity=0.397  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ++..+|+|+|+|..|+.++..++..|. +|.+++.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            456689999999999999999999999 999998643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=92.03  E-value=0.1  Score=40.28  Aligned_cols=85  Identities=22%  Similarity=0.308  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+++|.|+|.|.+|...+++++.+|. +|++.++++..       +.....       .++.    ++..  ..|+|+-+
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~~-------~~l~----ell~--~sDiv~~~   99 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRFT-------NSLE----EALR--EARAAVCA   99 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCCB-------SCSH----HHHT--TCSEEEEC
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceeee-------echh----hhhh--ccchhhcc
Confidence            57899999999999999999999999 99999976432       111111       1122    2222  47888875


Q ss_pred             CCCh-H---HH-HHHHHhhccCCeEEEEEccC
Q 019822          230 TGVP-S---LL-SEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       230 ~g~~-~---~~-~~~~~~l~~~~G~~v~~g~~  256 (335)
                      .... .   .+ ...++.++++ ..+|-++..
T Consensus       100 ~pl~~~t~~li~~~~l~~mk~~-ailIN~~RG  130 (181)
T d1qp8a1         100 LPLNKHTRGLVKYQHLALMAED-AVFVNVGRA  130 (181)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTT-CEEEECSCG
T ss_pred             cccccccccccccceeeecccc-ceEEecccc
Confidence            5421 1   11 4666777776 777766543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=91.96  E-value=0.2  Score=42.22  Aligned_cols=73  Identities=12%  Similarity=0.074  Sum_probs=44.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhc-CCceEe-CCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAF-GMTDFI-NPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~l-ga~~v~-~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      +|||+|+ |-+|..+++.+...|.-+|+++++...+...+.+. ....+. |-..  ..++.+.+.     +++|+|+.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~--~~~~~~~~~-----~~~d~Vih~   74 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISI--HSEWIEYHV-----KKCDVVLPL   74 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTT--CSHHHHHHH-----HHCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCC--hHHHHHHHH-----hCCCccccc
Confidence            5899987 99999999888777833899998765554443322 122221 2111  123333222     168999997


Q ss_pred             CCC
Q 019822          230 TGV  232 (335)
Q Consensus       230 ~g~  232 (335)
                      .+.
T Consensus        75 a~~   77 (342)
T d2blla1          75 VAI   77 (342)
T ss_dssp             BCC
T ss_pred             ccc
Confidence            763

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.96  E-value=0.078  Score=45.11  Aligned_cols=93  Identities=23%  Similarity=0.264  Sum_probs=53.0

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc---eEeCCCCCCchhHHHHHHhhh
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT---DFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~---~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ....++++||-+|+|. |.++..+|+ .|+++|++++.++ ..+.+    ++.+..   .++..+.   .+.     . .
T Consensus        34 ~~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~---~~l-----~-~  101 (328)
T d1g6q1_          34 KDLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKL---EDV-----H-L  101 (328)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCT---TTS-----C-C
T ss_pred             cccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeeh---hhc-----c-C
Confidence            4456899999999874 666654444 6877999999875 22332    344421   2232221   111     1 1


Q ss_pred             CCCCccEEEEcC-C----C----hHHHHHHHHhhccCCeEEE
Q 019822          219 HGMGVDYCFECT-G----V----PSLLSEALETTKVGKGKVI  251 (335)
Q Consensus       219 ~g~g~d~vid~~-g----~----~~~~~~~~~~l~~~~G~~v  251 (335)
                      ....+|+|+... +    .    +..+...-+.|+++ |+++
T Consensus       102 ~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         102 PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             cccceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            234799998522 1    1    11334445778997 8874

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=91.90  E-value=0.33  Score=39.98  Aligned_cols=98  Identities=18%  Similarity=0.185  Sum_probs=64.8

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHh----cCCceEeCCCCCCchhHHHHHHhhhCC
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKA----FGMTDFINPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      .++.++.+||=+|+|. |..+..+++..+. .+|++++.+++..+.+++    .+...-+...+         +.++.-.
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d---------~~~~~~~   92 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGD---------ATEIELN   92 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESC---------TTTCCCS
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccc---------ccccccc
Confidence            3567888999999874 8888888887542 289999999988877754    33221111111         1111112


Q ss_pred             CCccEEEEcCC-----C-hHHHHHHHHhhccCCeEEEEEc
Q 019822          221 MGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       221 ~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      ..+|+|+....     . ...++.+.+.|+++ |.++...
T Consensus        93 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          93 DKYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             CCceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            37999986432     2 24678899999998 9988765

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=91.81  E-value=0.37  Score=39.16  Aligned_cols=35  Identities=14%  Similarity=0.197  Sum_probs=30.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      .++|||+|+ |-+|..++..+...|. +|++++++..
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~   38 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVREST   38 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCc
Confidence            468999997 9999999999999999 9999997653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.80  E-value=0.072  Score=42.72  Aligned_cols=75  Identities=19%  Similarity=0.251  Sum_probs=46.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCCce-EeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGMTD-FINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      ++++|||+|+ |-+|..+++.+...|. .+|+++.|++.+...-..-.... +.|..+      .+.+.+..  +++|.+
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~------~~~~~~~~--~~~d~v   84 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK------LDDYASAF--QGHDVG   84 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG------GGGGGGGG--SSCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc------cccccccc--cccccc
Confidence            3468999998 9999999998877774 48999998664432211111121 122221      12233332  368999


Q ss_pred             EEcCCC
Q 019822          227 FECTGV  232 (335)
Q Consensus       227 id~~g~  232 (335)
                      +.+.+.
T Consensus        85 i~~~~~   90 (232)
T d2bkaa1          85 FCCLGT   90 (232)
T ss_dssp             EECCCC
T ss_pred             cccccc
Confidence            999875

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.76  E-value=0.088  Score=43.04  Aligned_cols=41  Identities=12%  Similarity=0.097  Sum_probs=32.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHH-HHH--cCCCEEEEEcCChhhHHHH
Q 019822          150 KGSSVAVLGL-GTVGLGAVDG-ARM--HGAAKIIGIDKNPWKKEKG  191 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~l-a~~--~G~~~V~~~~~~~~~~~~~  191 (335)
                      .++.+||+|+ +++|.+.++. |+.  .|+ +|+.+++++++++.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHH
Confidence            4567788887 8999987765 443  588 999999999988765

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=91.70  E-value=0.087  Score=44.84  Aligned_cols=37  Identities=24%  Similarity=0.140  Sum_probs=33.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWK  187 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~  187 (335)
                      ++++|||+|+ |-+|..+++.+...|+ +|+++++++.+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~   44 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPT   44 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCc
Confidence            5799999987 9999999999999999 99999987654

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=91.61  E-value=0.43  Score=37.75  Aligned_cols=93  Identities=17%  Similarity=0.202  Sum_probs=60.6

Q ss_pred             EEEEEcCCHHHH-HHHHHHHHc-CCCEEE-EEcCChhhHHH-HHhcCCc--eEeCCCCCCchhHHHHHHhhhCCCCccEE
Q 019822          153 SVAVLGLGTVGL-GAVDGARMH-GAAKII-GIDKNPWKKEK-GKAFGMT--DFINPDDEPNKSISELVKGITHGMGVDYC  226 (335)
Q Consensus       153 ~VlI~G~g~vG~-~ai~la~~~-G~~~V~-~~~~~~~~~~~-~~~lga~--~v~~~~~~~~~~~~~~i~~~~~g~g~d~v  226 (335)
                      +|.|+|+|.+|. ..+...+.. +. +++ ++++++++.+. +++++..  .+..+++         ++++.....+|+|
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d---------~~ell~~~~iD~V  104 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN---------FDKIAKDPKIDAV  104 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSSS---------GGGGGGCTTCCEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccCc---------hhhhcccccceee
Confidence            788999999986 344444443 66 666 55667777555 4667643  2333332         3344445589999


Q ss_pred             EEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          227 FECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       227 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      +-++......+.+..++..  |.=+.+.-+.
T Consensus       105 ~I~tp~~~H~~~~~~al~~--gk~v~~EKPl  133 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKA--GKHVMCEKPM  133 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHT--TCEEEECSSC
T ss_pred             eeccchhhhhhHHHHhhhc--chhhhcCCCc
Confidence            9998887778888888877  4566665443

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.61  E-value=0.11  Score=40.52  Aligned_cols=37  Identities=24%  Similarity=0.398  Sum_probs=33.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      -.|++|.|+|.|.+|..++++++.+|+ +|++.++...
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~   83 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLS   83 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSC
T ss_pred             eeCceEEEeccccccccceeeeecccc-ceeeccCccc
Confidence            467899999999999999999999999 9999987544

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.61  E-value=0.084  Score=39.29  Aligned_cols=34  Identities=24%  Similarity=0.308  Sum_probs=30.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK  183 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~  183 (335)
                      -.+++|||+|+|.+|..-+..+...|+ +|++++.
T Consensus        11 l~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence            468999999999999999999999999 9988863

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.56  E-value=0.53  Score=39.61  Aligned_cols=37  Identities=19%  Similarity=0.109  Sum_probs=29.7

Q ss_pred             CCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019822          151 GSSVAVLGL---GTVGLGAVDGARMHGAAKIIGIDKNPWKK  188 (335)
Q Consensus       151 ~~~VlI~G~---g~vG~~ai~la~~~G~~~V~~~~~~~~~~  188 (335)
                      ++..||+|+   .++|.+.++.+...|+ +|+.+.++....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhh
Confidence            466788894   3899999999999999 998887665543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.53  E-value=0.095  Score=44.25  Aligned_cols=34  Identities=18%  Similarity=0.229  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          151 GSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .++|+|+|+|..|+.++..+...|. +|.+++.++
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            5789999999999999999988899 999999664

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=91.40  E-value=1.4  Score=32.99  Aligned_cols=97  Identities=15%  Similarity=0.210  Sum_probs=55.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC-ceEeCCCCCCchhHHHHHHhhhCCC
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM-TDFINPDDEPNKSISELVKGITHGM  221 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga-~~v~~~~~~~~~~~~~~i~~~~~g~  221 (335)
                      ...++.+||=.++|. |...+..+ ..|+ +|+.++.+++..+.+    +.++. ..+...+.   ..+.....  ..+.
T Consensus        38 ~~~~g~~vLDl~~G~-G~~~i~a~-~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~---d~~~~~~~--~~~~  109 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGS-GAVGLEAA-SEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV---EVFLPEAK--AQGE  109 (171)
T ss_dssp             HCTTCCEEEEETCSS-CHHHHHHH-HTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH---HHHHHHHH--HTTC
T ss_pred             cccCCCeEEEecccc-chhhhhhh-hccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeeh---hccccccc--ccCC
Confidence            457888999886532 33334433 3688 899999999887766    34554 34554443   22322222  2334


Q ss_pred             CccEEE-Ec---CCChHHHHHHHH--hhccCCeEEEE
Q 019822          222 GVDYCF-EC---TGVPSLLSEALE--TTKVGKGKVIV  252 (335)
Q Consensus       222 g~d~vi-d~---~g~~~~~~~~~~--~l~~~~G~~v~  252 (335)
                      .||+|| |.   .+....+..+++  .++++ |.++.
T Consensus       110 ~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         110 RFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             CEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             ccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            799997 52   233334444443  46775 76654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.33  E-value=0.24  Score=40.57  Aligned_cols=36  Identities=14%  Similarity=0.146  Sum_probs=27.2

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH
Q 019822          154 VAVLGL-GTVGLGAVDGARMHGAAKIIGIDK-NPWKKEK  190 (335)
Q Consensus       154 VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~-~~~~~~~  190 (335)
                      +||+|+ +++|.+.++.+...|+ +|+.+++ ++++.+.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~   42 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA   42 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHH
Confidence            466686 8999999999999999 8887654 4444433

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.33  E-value=0.1  Score=42.36  Aligned_cols=34  Identities=24%  Similarity=0.331  Sum_probs=29.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      +.|||+|+ +++|.+.++.+...|+ +|+.++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            35788886 9999999999999999 9999987653

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=91.28  E-value=0.19  Score=37.52  Aligned_cols=40  Identities=18%  Similarity=0.142  Sum_probs=33.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK  188 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~  188 (335)
                      ++..+|.|+|+|.+|..++.++...+..+++.++.++++.
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            5668899999999999998888888877999999877653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.22  E-value=0.4  Score=36.29  Aligned_cols=95  Identities=25%  Similarity=0.249  Sum_probs=63.3

Q ss_pred             cccccchhhhhHHHHHhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCC
Q 019822          129 SFLSCGFTTGYGAAWKEAKV-EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEP  206 (335)
Q Consensus       129 a~l~~~~~ta~~~l~~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~  206 (335)
                      +.+||.....+. +.++.++ -.|++|+|+|. ..+|.-++.|+...|+ +|+.+.....                    
T Consensus        17 ~~~PcTp~aii~-lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~--------------------   74 (170)
T d1a4ia1          17 CFIPCTPKGCLE-LIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTA--------------------   74 (170)
T ss_dssp             CCCCHHHHHHHH-HHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCS--------------------
T ss_pred             CCCCChHHHHHH-HHHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEecccc--------------------
Confidence            345554443333 3355554 47899999996 7899999999999999 9988874321                    


Q ss_pred             chhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccC
Q 019822          207 NKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       207 ~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                        +..+.+      +..|+++-++|.+..+.  .+.++++ ..++++|..
T Consensus        75 --~l~~~~------~~aDivi~a~G~~~~i~--~~~vk~g-~iviDvgi~  113 (170)
T d1a4ia1          75 --HLDEEV------NKGDILVVATGQPEMVK--GEWIKPG-AIVIDCGIN  113 (170)
T ss_dssp             --SHHHHH------TTCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred             --cHHHHH------hhccchhhccccccccc--cccccCC-CeEeccCcc
Confidence              121112      15789998888875433  3467776 788888754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.17  E-value=0.4  Score=40.50  Aligned_cols=31  Identities=26%  Similarity=0.216  Sum_probs=27.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  183 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~  183 (335)
                      +.|||+|+ |-+|..++..+...|. +|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence            57899987 9999999999988999 9999864

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=91.10  E-value=0.097  Score=42.46  Aligned_cols=33  Identities=18%  Similarity=0.241  Sum_probs=29.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      -|+|+|+|+.|++++..+...|. +|.++++++.
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            48899999999999998888999 9999997754

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=91.10  E-value=0.054  Score=41.94  Aligned_cols=35  Identities=26%  Similarity=0.197  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ++..|+|+|+|+.|+.++..+...|. +|+++++..
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence            45679999999999999999999999 888887543

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.06  E-value=0.18  Score=37.68  Aligned_cols=36  Identities=22%  Similarity=0.302  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      -+++|+|+|+|.+|.=++..+...|++.|+.+.+.+
T Consensus        44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            467899999999999999999999997888887643

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.05  E-value=0.82  Score=39.11  Aligned_cols=32  Identities=25%  Similarity=0.308  Sum_probs=28.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  183 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~  183 (335)
                      |.+|||+|+ |-+|..++..+...|+ +|+++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iDn   33 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDN   33 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEec
Confidence            578999987 9999999999999999 9999973

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=91.03  E-value=1.5  Score=35.92  Aligned_cols=55  Identities=15%  Similarity=0.224  Sum_probs=39.0

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHhcCCceE
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDF  199 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lga~~v  199 (335)
                      +...+.+...|+...+|..|++++..++.+|. +++++..   ++.+.+.++.+|+.-+
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~-~~~i~~p~~~~~~k~~~~~~~GA~v~  110 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGY-RMKLLMPDNMSQERRAAMRAYGAELI  110 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEEEESCCCHHHHHHHHHTTCEEE
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCc-ceEeeeccCchhhhhHHHHHhCCCcc
Confidence            33445566665555779999999999999998 5444432   4567778888888643

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=90.84  E-value=0.11  Score=41.85  Aligned_cols=31  Identities=42%  Similarity=0.547  Sum_probs=27.8

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      |+|+|+|+.|++++..+...|. +|+++++++
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGN   35 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            7899999999998888888999 999999765

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.81  E-value=0.46  Score=35.03  Aligned_cols=39  Identities=36%  Similarity=0.430  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhh
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWK  187 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~  187 (335)
                      ..+.+|.|+|+|.+|..++..+...+. .+++.++.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            346789999999999999888887764 489999988776

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.79  E-value=2.3  Score=35.92  Aligned_cols=55  Identities=18%  Similarity=0.262  Sum_probs=39.8

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc---CChhhHHHHHhcCCceE
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID---KNPWKKEKGKAFGMTDF  199 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~---~~~~~~~~~~~lga~~v  199 (335)
                      +...+++...|+.-.+|..|.+++..|+.+|. +.+++.   .++++.+.++.+|++-+
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi-~~~iv~p~~~~~~k~~~i~~~GA~vv  147 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGY-RCIIVMPEKMSSEKVDVLRALGAEIV  147 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTC-EEEEEECSCCCHHHHHHHHHTTCEEE
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccC-CeEEEeeccchHHHHHHHHhcCCeEE
Confidence            33445666666655679999999999999999 544443   33467788899998644

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.71  E-value=0.38  Score=39.33  Aligned_cols=104  Identities=12%  Similarity=-0.017  Sum_probs=59.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHc-------CCCEEEEEcCChhhHHHHHhc-C-----CceEeCCCCCCchhHHHHHH
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMH-------GAAKIIGIDKNPWKKEKGKAF-G-----MTDFINPDDEPNKSISELVK  215 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~-------G~~~V~~~~~~~~~~~~~~~l-g-----a~~v~~~~~~~~~~~~~~i~  215 (335)
                      ++.-+||=+|+|+ |..+..+++.+       +. ++++++.++...+.+++. .     ....++.+..+...+.....
T Consensus        39 ~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~-~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (280)
T d1jqea_          39 KSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCI-NNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRML  116 (280)
T ss_dssp             CSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEE-EEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHT
T ss_pred             CCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCce-EEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhc
Confidence            4444799998753 44544444432       23 678999999888877542 1     11112222200012222222


Q ss_pred             hhhCCCCccEEEEcCC-----C-hHHHHHHHHhhccCCeEEEEEcc
Q 019822          216 GITHGMGVDYCFECTG-----V-PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .......||+|+....     . ...+..+.+.|+++ |.++....
T Consensus       117 ~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         117 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             TSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             ccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence            2233458999986332     2 34788999999998 98776643

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.71  E-value=0.46  Score=34.89  Aligned_cols=38  Identities=21%  Similarity=0.112  Sum_probs=31.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEcCChhhHH
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGA-AKIIGIDKNPWKKE  189 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~  189 (335)
                      ++|.|+|+ |.+|..++.++...+. .+++.++.++.+-+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~   40 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV   40 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh
Confidence            46889996 9999999999998875 68999998765433

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.66  E-value=0.18  Score=35.98  Aligned_cols=64  Identities=20%  Similarity=0.386  Sum_probs=44.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ..+++++|+|+|.+|.-+++.+...|. +|..+.+++.=      ++       -+   ....+.+++....+|+++..+
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~~l------~~-------~d---~~~~~~~~~~l~~~GV~~~~~   92 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGAMF------LG-------LD---EELSNMIKDMLEETGVKFFLN   92 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSSCC------TT-------CC---HHHHHHHHHHHHHTTEEEECS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccccc------cC-------CC---HHHHHHHHHHHHHCCcEEEeC
Confidence            345789999999999999999999999 99999875321      11       11   445555555444456776664


Q ss_pred             c
Q 019822          229 C  229 (335)
Q Consensus       229 ~  229 (335)
                      +
T Consensus        93 ~   93 (122)
T d1xhca2          93 S   93 (122)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=90.60  E-value=0.12  Score=39.36  Aligned_cols=30  Identities=20%  Similarity=0.243  Sum_probs=27.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDK  183 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~  183 (335)
                      -|+|+|+|+.|+.++..+...|. +|..+++
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence            37899999999999999999999 8888875

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=90.57  E-value=0.52  Score=37.88  Aligned_cols=95  Identities=18%  Similarity=0.211  Sum_probs=60.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eE--eCCCCCCchhHHHHHHhhhCC
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DF--INPDDEPNKSISELVKGITHG  220 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~~g  220 (335)
                      ..++++||=+|+|. |..+..+++. |..+|+++|.|++.++.+++    .+.. .+  +..+.     .   -..+..+
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~-----~---~~~~~~~   91 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS-----Y---GRHMDLG   91 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT-----T---TSCCCCS
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcch-----h---hhccccc
Confidence            57889999999875 6667777775 44489999999998888753    3321 11  11110     0   0011123


Q ss_pred             CCccEEEEcCCC------h----HHHHHHHHhhccCCeEEEEE
Q 019822          221 MGVDYCFECTGV------P----SLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       221 ~g~d~vid~~g~------~----~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ..+|+|+....-      .    ..+..+.+.|+++ |+++..
T Consensus        92 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~  133 (252)
T d1ri5a_          92 KEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT  133 (252)
T ss_dssp             SCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             ccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence            479999864332      1    2456777889997 988764

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.54  E-value=0.066  Score=42.67  Aligned_cols=96  Identities=10%  Similarity=-0.034  Sum_probs=64.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC----Cce--EeCCCCCCchhHHHHHHhhh-C
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG----MTD--FINPDDEPNKSISELVKGIT-H  219 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg----a~~--v~~~~~~~~~~~~~~i~~~~-~  219 (335)
                      ...++.+||-+|+|. |..+..+++..+. +|++++.+++-.+.+++.-    ...  .+..+          +.++. .
T Consensus        57 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d----------~~~~~~~  124 (222)
T d2ex4a1          57 NKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCG----------LQDFTPE  124 (222)
T ss_dssp             -CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECC----------GGGCCCC
T ss_pred             CCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccccccccc----------ccccccc
Confidence            346778999999874 7778787766666 9999999999888886542    111  11111          11221 2


Q ss_pred             CCCccEEEEcC-----CCh---HHHHHHHHhhccCCeEEEEEcc
Q 019822          220 GMGVDYCFECT-----GVP---SLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       220 g~g~d~vid~~-----g~~---~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ...+|+|+...     ..+   ..+..+.+.|+++ |.++....
T Consensus       125 ~~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~~  167 (222)
T d2ex4a1         125 PDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKDN  167 (222)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEEc
Confidence            34789998632     222   3677888999997 99887754

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.33  E-value=0.81  Score=33.66  Aligned_cols=77  Identities=14%  Similarity=0.107  Sum_probs=45.2

Q ss_pred             HHHhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCc---eEeCCCCCCchhHHHH
Q 019822          142 AWKEAK-VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMT---DFINPDDEPNKSISEL  213 (335)
Q Consensus       142 l~~~~~-~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~---~v~~~~~~~~~~~~~~  213 (335)
                      ++...+ .-++.+||=+++|+ |.+.+..+ ..|+++|+.++.+++..+.+    +.++..   .++..      +....
T Consensus         5 ~fn~l~~~~~g~~vlDl~~Gt-G~~~iea~-~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~------D~~~~   76 (152)
T d2esra1           5 IFNMIGPYFNGGRVLDLFAGS-GGLAIEAV-SRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM------EAERA   76 (152)
T ss_dssp             HHHHHCSCCCSCEEEEETCTT-CHHHHHHH-HTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS------CHHHH
T ss_pred             HHHHHHhhCCCCeEEEcCCcc-CHHHHHHH-HhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcc------ccccc
Confidence            444433 34788998886532 33333433 36888999999998876655    445543   23332      23344


Q ss_pred             HHhhhCCCCccEEEE
Q 019822          214 VKGITHGMGVDYCFE  228 (335)
Q Consensus       214 i~~~~~g~g~d~vid  228 (335)
                      +... . ..+|+||-
T Consensus        77 l~~~-~-~~fDiIf~   89 (152)
T d2esra1          77 IDCL-T-GRFDLVFL   89 (152)
T ss_dssp             HHHB-C-SCEEEEEE
T ss_pred             cccc-c-cccceeEe
Confidence            4432 3 37999983

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.32  E-value=0.26  Score=41.89  Aligned_cols=37  Identities=14%  Similarity=0.197  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019822          149 EKGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW  186 (335)
Q Consensus       149 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~  186 (335)
                      ..+-+|||+|+ |-+|..++..+...|. +|+++++.+.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~   50 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKN   50 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCc
Confidence            35678999987 9999999999999999 9999976443

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.29  E-value=0.19  Score=37.75  Aligned_cols=36  Identities=28%  Similarity=0.379  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~-~V~~~~~~~  185 (335)
                      .|++|+|+|+|.+|+.++..++..+.+ +|+.+++++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            378999999999999999988887742 788888655

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.27  E-value=0.13  Score=40.57  Aligned_cols=31  Identities=32%  Similarity=0.371  Sum_probs=28.1

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      |+|+|+|..|+.++..+...|. +|.++++++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7899999999999999988998 999999764

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.26  E-value=0.12  Score=40.72  Aligned_cols=31  Identities=32%  Similarity=0.322  Sum_probs=27.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      -|+|+|+|+.|+.++..+...|. +|++++..
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~   35 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR   35 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            37889999999999999999999 89999864

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.04  E-value=0.29  Score=37.63  Aligned_cols=91  Identities=24%  Similarity=0.302  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      ..++++.|+|.|.+|...+++++.+|. +|++.++...+... ...+...         .++.+.++      ..|+|+-
T Consensus        42 l~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~---------~~l~ell~------~sDiv~~  104 (184)
T d1ygya1          42 IFGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL---------LSLDDLLA------RADFISV  104 (184)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE---------CCHHHHHH------HCSEEEE
T ss_pred             ccceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee---------ccHHHHHh------hCCEEEE
Confidence            357899999999999999999999999 99999976544333 2333221         12322232      3688876


Q ss_pred             cCCCh-H---HH-HHHHHhhccCCeEEEEEccCC
Q 019822          229 CTGVP-S---LL-SEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       229 ~~g~~-~---~~-~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      +.... +   .+ ...++.++++ ..+|=++...
T Consensus       105 ~~Plt~~T~~lin~~~l~~mk~~-a~lIN~sRG~  137 (184)
T d1ygya1         105 HLPKTPETAGLIDKEALAKTKPG-VIIVNAARGG  137 (184)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTT-EEEEECSCTT
T ss_pred             cCCCCchhhhhhhHHHHhhhCCC-ceEEEecchh
Confidence            55421 1   12 3556667775 6666555443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.79  E-value=0.11  Score=42.35  Aligned_cols=32  Identities=28%  Similarity=0.465  Sum_probs=28.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      +|+|+|+|..|+.++..+...|. +|.++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            48999999999999999999999 999998653

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.78  E-value=0.75  Score=37.84  Aligned_cols=99  Identities=16%  Similarity=0.211  Sum_probs=57.7

Q ss_pred             HhcCCCCCCEEEEEcC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCCceE-eCCCCCCchhHHHHHHh
Q 019822          144 KEAKVEKGSSVAVLGL--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGMTDF-INPDDEPNKSISELVKG  216 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~--g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga~~v-~~~~~~~~~~~~~~i~~  216 (335)
                      ......++++||=.-+  |+=-.   +++..+.-..|++.+.++.|...+    +.+|...+ +...+   ....    .
T Consensus        96 ~~L~~~~g~~vLD~CAaPGgKt~---~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~---~~~~----~  165 (284)
T d1sqga2          96 TWLAPQNGEHILDLCAAPGGKTT---HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG---RYPS----Q  165 (284)
T ss_dssp             HHHCCCTTCEEEEESCTTCHHHH---HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT---TCTH----H
T ss_pred             cccCccccceeEeccCccccchh---hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc---cccc----h
Confidence            3457789999998843  54333   444434334899999999988665    56776432 22222   1111    1


Q ss_pred             hhCCCCccEEE-E--cCCCh-------------------------HHHHHHHHhhccCCeEEEEE
Q 019822          217 ITHGMGVDYCF-E--CTGVP-------------------------SLLSEALETTKVGKGKVIVI  253 (335)
Q Consensus       217 ~~~g~g~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~  253 (335)
                      ......||.|+ |  |+|..                         .++..+++.++++ |++|..
T Consensus       166 ~~~~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~g-G~lvYs  229 (284)
T d1sqga2         166 WCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYA  229 (284)
T ss_dssp             HHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             hcccccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCC-ceEEEe
Confidence            12233799886 6  65541                         1455666677775 766544

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.69  E-value=0.72  Score=32.93  Aligned_cols=62  Identities=19%  Similarity=0.178  Sum_probs=49.0

Q ss_pred             HHHhcCCCCCCEEEEE-cCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCC
Q 019822          142 AWKEAKVEKGSSVAVL-GLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPD  203 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~-G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~  203 (335)
                      +++.+++..-+.+++. ..-..-.++.++++.+|..++++...+++..+.++++|++.++++.
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            4467788777766655 4445567888899999988899999888899999999999998765

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.64  E-value=0.44  Score=34.09  Aligned_cols=87  Identities=23%  Similarity=0.259  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCHH-----------HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGLGTV-----------GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~g~v-----------G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ..++|||+|+|+.           +..++..+|..|+ +++.+..+++....-... +++++-..     -..+.+.+..
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYfeP-----lt~e~v~~Ii   78 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYIEP-----IHWEVVRKII   78 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEECSC-----CCHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeeeec-----CCHHHHHHHH
Confidence            4578999998643           3455666667899 999999888765442222 34443211     1122333333


Q ss_pred             CCCCccEEEEcCCChHHHHHHHHhh
Q 019822          219 HGMGVDYCFECTGVPSLLSEALETT  243 (335)
Q Consensus       219 ~g~g~d~vid~~g~~~~~~~~~~~l  243 (335)
                      ..++.|.|+-+.|+--.++.+.++.
T Consensus        79 ~~E~pd~il~~~GGQtalnla~~L~  103 (127)
T d1a9xa3          79 EKERPDAVLPTMGGQTALNCALELE  103 (127)
T ss_dssp             HHHCCSEEECSSSHHHHHHHHHHHH
T ss_pred             HHhCcCCeEEEeeeehHhHHHHHHH
Confidence            3347888888888764555555543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=89.47  E-value=0.17  Score=42.30  Aligned_cols=32  Identities=31%  Similarity=0.334  Sum_probs=28.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .|+|+|||..|++++..++..|. +|.++++.+
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCC
Confidence            58999999999999999999999 899998754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.47  E-value=0.21  Score=40.61  Aligned_cols=34  Identities=32%  Similarity=0.477  Sum_probs=30.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID  182 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~  182 (335)
                      --++.+|+|.|.|.||..+++++...|+ +|+++.
T Consensus        33 ~l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             CSTTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence            3477899999999999999999999999 888775

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.40  E-value=0.22  Score=43.89  Aligned_cols=34  Identities=26%  Similarity=0.405  Sum_probs=30.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .+|||+|+|++|.-++..+...|.+++..+|.+.
T Consensus        38 ~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          38 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             CCEEEECSSTTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             CeEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            6799999999999999999999999999998544

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.39  E-value=0.39  Score=35.55  Aligned_cols=38  Identities=11%  Similarity=0.076  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK  187 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~  187 (335)
                      |..+|.|+|+|.+|..++.++...+..++..++.++++
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~   39 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNM   39 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCc
Confidence            56789999999999999988888888899999987754

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=89.38  E-value=0.43  Score=38.63  Aligned_cols=102  Identities=11%  Similarity=-0.131  Sum_probs=66.4

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcC-CceEeCCCCCCchhHHHHHHhhh-CCC
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFG-MTDFINPDDEPNKSISELVKGIT-HGM  221 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lg-a~~v~~~~~~~~~~~~~~i~~~~-~g~  221 (335)
                      +.....++.+||=+|+|. |..+..++...+. +|++++.+++-.+.+++.- ....++...   .+    +.++. ...
T Consensus        87 ~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~---~d----~~~~~~~~~  157 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFIL---AS----METATLPPN  157 (254)
T ss_dssp             HTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEE---SC----GGGCCCCSS
T ss_pred             hhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEE---cc----ccccccCCC
Confidence            444556778999999874 8888888876666 9999999999888886542 111221111   11    12222 233


Q ss_pred             CccEEEEcCCC-----h---HHHHHHHHhhccCCeEEEEEcc
Q 019822          222 GVDYCFECTGV-----P---SLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       222 g~d~vid~~g~-----~---~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      .||+|+..-.-     +   ..+..+.+.|+++ |.++....
T Consensus       158 ~fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e~  198 (254)
T d1xtpa_         158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKEN  198 (254)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            79999864321     1   3467888899997 98887643

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=89.35  E-value=0.15  Score=41.45  Aligned_cols=103  Identities=14%  Similarity=0.018  Sum_probs=63.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HhcCC-ceEeCCCCCCchhHHHHHHh
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKG----KAFGM-TDFINPDDEPNKSISELVKG  216 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~----~~lga-~~v~~~~~~~~~~~~~~i~~  216 (335)
                      +.+...+....+||=+|+|. |..++.+++...-.++++++. ++..+.+    .+.+. +.+- ...   .++    .+
T Consensus        72 ~~~~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~rv~-~~~---~D~----~~  141 (253)
T d1tw3a2          72 PAAAYDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVD-VVE---GDF----FE  141 (253)
T ss_dssp             HHHHSCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEE-EEE---CCT----TS
T ss_pred             HHhhcCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhcccchh-hcc---ccc----hh
Confidence            44556677888999999874 888889998874338998886 4444443    33332 1111 000   111    01


Q ss_pred             hhCCCCccEEEEcCC-----Ch---HHHHHHHHhhccCCeEEEEEccC
Q 019822          217 ITHGMGVDYCFECTG-----VP---SLLSEALETTKVGKGKVIVIGVG  256 (335)
Q Consensus       217 ~~~g~g~d~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~g~~  256 (335)
                      ... .++|+|+-..-     .+   ..++.+.+.|+++ |+++.....
T Consensus       142 ~~~-~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~~  187 (253)
T d1tw3a2         142 PLP-RKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHERD  187 (253)
T ss_dssp             CCS-SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             hcc-cchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEecc
Confidence            112 26899884322     12   3578889999998 999887643

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.32  E-value=1.1  Score=37.40  Aligned_cols=101  Identities=18%  Similarity=0.197  Sum_probs=67.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHH----HhcCCceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGAR-MHGAAKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~-~~G~~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      ...+++.|+|+|..+...++.+. ....++|.+.++++++.+.+    +..+.....+..        +.+      .+.
T Consensus       123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~--------~a~------~~a  188 (320)
T d1omoa_         123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPA--------EEA------SRC  188 (320)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCH--------HHH------TSS
T ss_pred             CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchh--------hhh------ccc
Confidence            44568888999999988777665 46788999999999887554    344443332211        122      268


Q ss_pred             cEEEEcCCChH-HHHHHHHhhccCCeEEEEEccCCCccccchhH
Q 019822          224 DYCFECTGVPS-LLSEALETTKVGKGKVIVIGVGVDAMVPLNVI  266 (335)
Q Consensus       224 d~vid~~g~~~-~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~  266 (335)
                      |+|+-|+.+.. .+.  .+.++++ -++..+|.......+++..
T Consensus       189 DiV~taT~s~~P~~~--~~~l~~G-~hv~~iGs~~p~~~Eld~~  229 (320)
T d1omoa_         189 DVLVTTTPSRKPVVK--AEWVEEG-THINAIGADGPGKQELDVE  229 (320)
T ss_dssp             SEEEECCCCSSCCBC--GGGCCTT-CEEEECSCCSTTCCCBCHH
T ss_pred             cEEEEeccCcccccc--hhhcCCC-CeEeecCCccccccccCHH
Confidence            99998877542 322  2457886 8999998876544555544

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=89.15  E-value=0.2  Score=41.40  Aligned_cols=37  Identities=19%  Similarity=0.234  Sum_probs=31.7

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019822          150 KGSSVAVLGL-G--TVGLGAVDGARMHGAAKIIGIDKNPWK  187 (335)
Q Consensus       150 ~~~~VlI~G~-g--~vG~~ai~la~~~G~~~V~~~~~~~~~  187 (335)
                      +++++||+|+ |  ++|.+.++.+...|+ +|+.+.+++..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhh
Confidence            6889999996 4  799999999999999 99988876543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=89.08  E-value=0.24  Score=39.91  Aligned_cols=36  Identities=28%  Similarity=0.395  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      ...+|+|+|+|++|..++..+..+|.+++..+|.+.
T Consensus        29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            457999999999999999999999999999998543

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=89.02  E-value=1.3  Score=32.74  Aligned_cols=88  Identities=15%  Similarity=0.162  Sum_probs=55.2

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHc-CCCEEEEE-cCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          153 SVAVLGLGTVGLG-AVDGARMH-GAAKIIGI-DKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       153 ~VlI~G~g~vG~~-ai~la~~~-G~~~V~~~-~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      +|.|+|+|.+|.- .+...+.. +. +++++ ++++++.+. .++++... +  +     ++. .+   .  ..+|+|+-
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~~~~~-~--~-----~~~-~l---~--~~~D~V~I   67 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESWRIPY-A--D-----SLS-SL---A--ASCDAVFV   67 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHHTCCB-C--S-----SHH-HH---H--TTCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhcccccc-c--c-----cch-hh---h--hhcccccc
Confidence            5889999999864 56655544 66 66554 455555444 46677542 1  1     121 22   1  25899999


Q ss_pred             cCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          229 CTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       229 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      |+......+.+..++..+  .=+++.-+.
T Consensus        68 ~tp~~~h~~~~~~al~~g--k~V~~EKPl   94 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNAG--VHVCVDKPL   94 (164)
T ss_dssp             CSCTTHHHHHHHHHHHTT--CEEEEESSS
T ss_pred             cccchhcccccccccccc--ceeeccccc
Confidence            988776778888888774  445565443

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.96  E-value=0.16  Score=39.80  Aligned_cols=30  Identities=27%  Similarity=0.419  Sum_probs=27.4

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      |+|+|+|+.|+.++..|..+|. +|.++++.
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            7889999999999999999999 89999864

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=88.65  E-value=0.9  Score=34.18  Aligned_cols=95  Identities=18%  Similarity=0.174  Sum_probs=56.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHhcCCc----------------------eEeCCCCCCch
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP--WKKEKGKAFGMT----------------------DFINPDDEPNK  208 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~--~~~~~~~~lga~----------------------~v~~~~~~~~~  208 (335)
                      +|.|.|-|-+|+++.+++...+. +|+++-...  +...++-++...                      .++..++   +
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~---p   77 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD---P   77 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS---G
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCC---h
Confidence            57899999999999998887788 776665322  333334332110                      1111221   1


Q ss_pred             hHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          209 SISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       209 ~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .   .+. + ...++|+|+||+|.-...+.+...+..+ .+-|.++.+.
T Consensus        78 ~---~i~-W-~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~  120 (168)
T d2g82a1          78 K---EIP-W-AEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPA  120 (168)
T ss_dssp             G---GCC-T-GGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred             H---HCc-c-cccCCceeEeccccccchHHhhhhhccc-cceeeecccc
Confidence            1   111 1 1237999999999654556777777765 5555555554

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.63  E-value=0.26  Score=41.05  Aligned_cols=43  Identities=19%  Similarity=0.203  Sum_probs=33.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHhcC
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKNPW--KKEKGKAFG  195 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~~--~~~~~~~lg  195 (335)
                      ++|||+|+ |-+|..++..+...|+ +|+++++...  ..+.++.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~   46 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELG   46 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhc
Confidence            58999987 9999999998888899 9999987543  334444444

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.58  E-value=0.19  Score=39.54  Aligned_cols=31  Identities=19%  Similarity=0.236  Sum_probs=28.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      .++|+|+|+.|+.++..|..+|. +|.++++.
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            47889999999999999999999 99999864

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=88.53  E-value=0.16  Score=42.76  Aligned_cols=32  Identities=31%  Similarity=0.343  Sum_probs=26.3

Q ss_pred             EEEEEcCCHHHHHHHHHHH-----HcCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGAR-----MHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~-----~~G~~~V~~~~~~~  185 (335)
                      -|+|+|+|.+|++++.++.     ..|. +|.++++.+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            3899999999999887773     4699 899998654

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.36  E-value=0.21  Score=39.08  Aligned_cols=30  Identities=30%  Similarity=0.331  Sum_probs=27.1

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      |+|+|+|+.|+.++..|...|. +|.++++.
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            7888999999999999999999 89999754

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.35  E-value=0.21  Score=39.55  Aligned_cols=31  Identities=32%  Similarity=0.368  Sum_probs=27.9

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      |+|+|+|+.|+.++..+...|. +|.++++.+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            7888999999999999999999 999998654

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.33  E-value=0.22  Score=38.41  Aligned_cols=32  Identities=16%  Similarity=0.078  Sum_probs=28.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      ..|+|+|+|+.|+.++..+...|. +|+++++.
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW   37 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence            579999999999999999989999 88888743

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.16  E-value=0.18  Score=42.00  Aligned_cols=32  Identities=19%  Similarity=0.322  Sum_probs=28.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      .|+|+|||..|+.++..+...|. +|.+++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            47899999999999999988898 999999754

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.16  E-value=1.2  Score=38.10  Aligned_cols=97  Identities=20%  Similarity=0.115  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCce---------------E-eCCCCCCchh
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMTD---------------F-INPDDEPNKS  209 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~~---------------v-~~~~~~~~~~  209 (335)
                      ++.+|| -+-+++|.-.+.+|+..|..+|++.|.+++..+.+++    .+...               + ++.     .+
T Consensus        45 ~~~~vL-D~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~-----~D  118 (375)
T d2dula1          45 NPKIVL-DALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINH-----DD  118 (375)
T ss_dssp             CCSEEE-ESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEE-----SC
T ss_pred             CCCEEE-EcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeeh-----hh
Confidence            344443 3446678899999999998899999999998887753    12111               1 111     12


Q ss_pred             HHHHHHhhhCCCCccEE-EEcCCCh-HHHHHHHHhhccCCeEEEEEcc
Q 019822          210 ISELVKGITHGMGVDYC-FECTGVP-SLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       210 ~~~~i~~~~~g~g~d~v-id~~g~~-~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ....+.+  .++.||+| +|..|++ +.++.++++++.+ |.+.....
T Consensus       119 a~~~~~~--~~~~fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTaT  163 (375)
T d2dula1         119 ANRLMAE--RHRYFHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTAT  163 (375)
T ss_dssp             HHHHHHH--STTCEEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             hhhhhHh--hcCcCCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEec
Confidence            2222222  34579988 5999975 5678999999986 76655543

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.11  E-value=0.47  Score=33.58  Aligned_cols=79  Identities=18%  Similarity=0.021  Sum_probs=44.5

Q ss_pred             CCCEEEEEcCCHH-----------HHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhh
Q 019822          150 KGSSVAVLGLGTV-----------GLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       150 ~~~~VlI~G~g~v-----------G~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      ..++|||+|+|+.           +..++.-+|..|+ +++.+..+++....--.. +++++-..     -..+.+.+..
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-aD~lYfep-----lt~e~v~~Ii   75 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-SDRLYFEP-----VTLEDVLEIV   75 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-SSEEECCC-----CSHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-cCceEEcc-----CCHHHHHHHH
Confidence            3568999998743           3456666667899 999998887765432111 34443211     1122233322


Q ss_pred             CCCCccEEEEcCCChHH
Q 019822          219 HGMGVDYCFECTGVPSL  235 (335)
Q Consensus       219 ~g~g~d~vid~~g~~~~  235 (335)
                      ..++.|.|+-..|+--.
T Consensus        76 ~~E~p~~ii~~~GGQta   92 (121)
T d1a9xa4          76 RIEKPKGVIVQYGGQTP   92 (121)
T ss_dssp             HHHCCSEEECSSSTHHH
T ss_pred             HHhCCCEEEeehhhhhH
Confidence            23356777777776533

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=88.06  E-value=2.3  Score=31.80  Aligned_cols=96  Identities=20%  Similarity=0.257  Sum_probs=59.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHhcCC-------c---------------eEeCCCCCCc
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGM-------T---------------DFINPDDEPN  207 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lga-------~---------------~v~~~~~~~~  207 (335)
                      +|.|.|-|-+|+++...+...+. +++++-.   +.+...++-++..       +               .+++.++  +
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~--p   78 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMK--P   78 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSS--G
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCC--h
Confidence            57889999999999999988888 6666642   2345555533211       0               1112121  1


Q ss_pred             hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      .+.  .+.+    .++|+|+||+|.-...+.+...+..+ .+-|.++.+..
T Consensus        79 ~~i--~W~~----~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~~  122 (169)
T d1dssg1          79 ENI--PWSK----AGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPSA  122 (169)
T ss_dssp             GGC--CHHH----HTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCCS
T ss_pred             HHC--Cccc----cCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCcc
Confidence            110  1111    27999999999755567777888776 66666665543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.97  E-value=0.43  Score=36.79  Aligned_cols=39  Identities=28%  Similarity=0.202  Sum_probs=33.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  193 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  193 (335)
                      +|.|+|.|-+|+..+.++ +.|. +|+++|.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            578899999999887666 4699 99999999999888754

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.87  E-value=0.23  Score=39.16  Aligned_cols=32  Identities=25%  Similarity=0.294  Sum_probs=27.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      -|+|+|+|+.|+.++..|..+|. +|.+++..+
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            37889999999999999999999 898888543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=87.86  E-value=0.24  Score=40.14  Aligned_cols=32  Identities=13%  Similarity=0.126  Sum_probs=28.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      -|+|+|+|.+|+.++..+...|. +|+++++.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999998888888898 999999753

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.52  E-value=0.58  Score=36.26  Aligned_cols=69  Identities=22%  Similarity=0.351  Sum_probs=42.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEE
Q 019822          151 GSSVAVLGL-GTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFE  228 (335)
Q Consensus       151 ~~~VlI~G~-g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid  228 (335)
                      .++|||+|+ |-+|..++..+...|. .+|++..+++..       ....+ ....   .++.+....+ .. ..|.|++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~-~~~~---~d~~~~~~~~-~~-~~d~vi~   68 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRL-DNPV---GPLAELLPQL-DG-SIDTAFC   68 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTE-ECCB---SCHHHHGGGC-CS-CCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hcccc-cccc---cchhhhhhcc-cc-chheeee
Confidence            378999998 9999999998888875 266666654311       00111 1111   2343333333 22 6899999


Q ss_pred             cCCC
Q 019822          229 CTGV  232 (335)
Q Consensus       229 ~~g~  232 (335)
                      ++|.
T Consensus        69 ~~g~   72 (212)
T d2a35a1          69 CLGT   72 (212)
T ss_dssp             CCCC
T ss_pred             eeee
Confidence            9875

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.30  E-value=0.23  Score=41.53  Aligned_cols=31  Identities=23%  Similarity=0.371  Sum_probs=27.6

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      |+|+|+|..|+.++..++..|. +|++++.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7899999999999999999999 999998643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.13  E-value=0.24  Score=37.51  Aligned_cols=33  Identities=24%  Similarity=0.377  Sum_probs=26.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCC-EEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAA-KIIGID  182 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~-~V~~~~  182 (335)
                      .+++|+|+|+|.+|.-++.-++.+|.+ +|+...
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~   35 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVG   35 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEec
Confidence            568999999999999999999999983 344444

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.10  E-value=0.4  Score=36.93  Aligned_cols=88  Identities=16%  Similarity=0.185  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEc
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFEC  229 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~  229 (335)
                      .+.+|.|+|.|.+|..++++++.+|. +|++.++.....       ........     ++.+.++      ..|+++-+
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~~-----~l~ell~------~sDii~i~  103 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQVQ-----HLSDLLN------MSDVVSLH  103 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEECS-----CHHHHHH------HCSEEEEC
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhhh-----hHHHHHh------hccceeec
Confidence            57899999999999999999999999 999998653211       00111111     1222222      35777765


Q ss_pred             CCCh----HHH-HHHHHhhccCCeEEEEEccCC
Q 019822          230 TGVP----SLL-SEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       230 ~g~~----~~~-~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      ..-.    ..+ ...++.++++ ..+|-++...
T Consensus       104 ~plt~~T~~li~~~~l~~mk~~-a~lIN~aRG~  135 (188)
T d1sc6a1         104 VPENPSTKNMMGAKEISLMKPG-SLLINASRGT  135 (188)
T ss_dssp             CCSSTTTTTCBCHHHHHHSCTT-EEEEECSCSS
T ss_pred             ccCCcchhhhccHHHHhhCCCC-CEEEEcCcHH
Confidence            5421    111 4666777775 6666665543

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.09  E-value=0.27  Score=38.85  Aligned_cols=104  Identities=20%  Similarity=0.170  Sum_probs=59.2

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HhcCCceEeCCCCCCchhHHHHHHhh--
Q 019822          145 EAKVEKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKGI--  217 (335)
Q Consensus       145 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~--  217 (335)
                      ..+..+.++||-+|.+. |..++.+|+++.. .+|+.++.+++..+.+    ++.|...-+.-..   .+..+.+.++  
T Consensus        51 lv~~~kpk~ILEiGt~~-G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~---Gd~~e~l~~l~~  126 (214)
T d2cl5a1          51 VIREYSPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILN---GASQDLIPQLKK  126 (214)
T ss_dssp             HHHHHCCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHGGGHHH
T ss_pred             HHHhhCCCEEEEEccCc-hhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeee---ccccccccchhh
Confidence            34445668999999753 6777888887632 3999999998877665    3445322111111   2333334333  


Q ss_pred             -hCCCCccEEE-EcCCChH----HHHHHHHhhccCCeEEEEEc
Q 019822          218 -THGMGVDYCF-ECTGVPS----LLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       218 -~~g~g~d~vi-d~~g~~~----~~~~~~~~l~~~~G~~v~~g  254 (335)
                       .....+|++| |..-...    .+...++.|+++ |.+ .+.
T Consensus       127 ~~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvI-v~D  167 (214)
T d2cl5a1         127 KYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVL-LAD  167 (214)
T ss_dssp             HSCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEE-EES
T ss_pred             cccccccceeeecccccccccHHHHHHHhCccCCC-cEE-EEe
Confidence             2234689887 5332211    133455668886 654 443

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=86.98  E-value=0.27  Score=38.48  Aligned_cols=30  Identities=33%  Similarity=0.306  Sum_probs=27.0

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      |+|+|+|+-|+.++..|...|. +|.+++..
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            7888999999999999999999 89998854

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.58  E-value=0.31  Score=38.10  Aligned_cols=30  Identities=27%  Similarity=0.376  Sum_probs=27.1

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      ++|+|+|+.|+.++..+...|. +|.+++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6788999999999999999999 89998754

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.52  E-value=0.4  Score=39.66  Aligned_cols=33  Identities=30%  Similarity=0.437  Sum_probs=30.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGID  182 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~  182 (335)
                      -.+.+|+|.|.|.||..+++++...|+ +|++++
T Consensus        34 L~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          34 FGDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            367899999999999999999999999 988886

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=86.43  E-value=1.9  Score=30.32  Aligned_cols=92  Identities=12%  Similarity=0.062  Sum_probs=58.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcCC
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTG  231 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~g  231 (335)
                      +.++|.|.|.+|..+++-++  +. +|++++.++++.+.++..|...+. .+.   .+ .+.+++. +=..++.++-++.
T Consensus         1 kHivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd~---~~-~~~L~~a-~i~~A~~vi~~~~   71 (129)
T d2fy8a1           1 RHVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GDP---TR-VSDLEKA-NVRGARAVIVNLE   71 (129)
T ss_dssp             CCEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SCT---TS-HHHHHHT-TCTTCSEEEECCS
T ss_pred             CEEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-ccc---CC-HHHHHHh-hhhcCcEEEEecc
Confidence            35788899999998888764  44 677888888988888888865443 332   11 2344443 2236888888777


Q ss_pred             ChHH---HHHHHHhhccCCeEEEEE
Q 019822          232 VPSL---LSEALETTKVGKGKVIVI  253 (335)
Q Consensus       232 ~~~~---~~~~~~~l~~~~G~~v~~  253 (335)
                      ....   .-...+.+.+. .+++..
T Consensus        72 ~d~~n~~~~~~~r~~~~~-~~iia~   95 (129)
T d2fy8a1          72 SDSETIHCILGIRKIDES-VRIIAE   95 (129)
T ss_dssp             SHHHHHHHHHHHHHHCSS-SCEEEE
T ss_pred             chhhhHHHHHHHHHHCCC-ceEEEE
Confidence            6522   22334455554 555544

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.34  E-value=0.35  Score=40.70  Aligned_cols=33  Identities=15%  Similarity=0.315  Sum_probs=26.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcC--CCEEEEEcCCh
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHG--AAKIIGIDKNP  185 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G--~~~V~~~~~~~  185 (335)
                      ++|+|+|+|..|++++..++..|  . +|++.++++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~-~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFD-QVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCS-EEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCC-CEEEEECCC
Confidence            68999999999998886665444  5 899999764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.21  E-value=0.33  Score=40.15  Aligned_cols=32  Identities=44%  Similarity=0.622  Sum_probs=28.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      -|+|+|+|..|+.++.-|...|+ +|+++++.+
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKEP   49 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            48999999999999999988999 999998643

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.20  E-value=0.3  Score=38.68  Aligned_cols=29  Identities=28%  Similarity=0.425  Sum_probs=26.7

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDK  183 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~  183 (335)
                      |+|+|+|+.|+.++..|...|. +|.+++.
T Consensus         6 viVIG~GpaGl~aA~~aa~~G~-kV~viE~   34 (235)
T d1h6va1           6 LIIIGGGSGGLAAAKEAAKFDK-KVMVLDF   34 (235)
T ss_dssp             EEEECCSHHHHHHHHHHGGGCC-CEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-eEEEEec
Confidence            7889999999999999999999 8999984

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=86.11  E-value=0.22  Score=37.75  Aligned_cols=83  Identities=19%  Similarity=0.203  Sum_probs=52.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc-CCCEEEEEc-CChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          153 SVAVLGLGTVGLGAVDGARMH-GAAKIIGID-KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~-~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      +|.|+|.|.+|...+..++.. ++ +++++. +++++.      ....+..+.+         ...+.  ..+|+|+.|+
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~~------~~~~~~~~~~---------~~~~~--~~~D~Vvi~t   66 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATLD------TKTPVFDVAD---------VDKHA--DDVDVLFLCM   66 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCCS------SSSCEEEGGG---------GGGTT--TTCSEEEECS
T ss_pred             eEEEECChHHHHHHHHHHHhCCCc-EEEEEEecccccc------cccccccchh---------hhhhc--cccceEEEeC
Confidence            688999999999888877764 56 665554 332211      1111221111         11121  2689999999


Q ss_pred             CChHHHHHHHHhhccCCeEEEEEc
Q 019822          231 GVPSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       231 g~~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      +.....+.+.++|..+ -.+++..
T Consensus        67 p~~~h~~~a~~aL~aG-~~vv~~~   89 (170)
T d1f06a1          67 GSATDIPEQAPKFAQF-ACTVDTY   89 (170)
T ss_dssp             CTTTHHHHHHHHHTTT-SEEECCC
T ss_pred             CCcccHHHHHHHHHCC-CcEEEec
Confidence            8877788999999986 5666543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.03  E-value=0.36  Score=39.79  Aligned_cols=32  Identities=25%  Similarity=0.439  Sum_probs=26.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      .|+|+|+|.+|++++..+...|.++|.+++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            58999999999988877777887579999865

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=85.83  E-value=5.4  Score=29.66  Aligned_cols=95  Identities=22%  Similarity=0.255  Sum_probs=58.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcC---ChhhHHHHHhcCCc----------------------eEeCCCCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMH-GAAKIIGIDK---NPWKKEKGKAFGMT----------------------DFINPDDEP  206 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~-G~~~V~~~~~---~~~~~~~~~~lga~----------------------~v~~~~~~~  206 (335)
                      +|.|.|-|.+|+++...+... .. +++++-.   +.+...++-++...                      .+++.++  
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~-~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~--   79 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKV-DIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD--   79 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSS-EEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS--
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCc-EEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCC--
Confidence            688999999999999877655 46 7777743   33555555332110                      0111111  


Q ss_pred             chhHHHHHHhhh-CCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          207 NKSISELVKGIT-HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       207 ~~~~~~~i~~~~-~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                             ..++. ...++|+|+||+|.-...+.+...+..+ ..-|.++.+..
T Consensus        80 -------p~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~g-akkViiSaP~~  124 (169)
T d1u8fo1          80 -------PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRVIISAPSA  124 (169)
T ss_dssp             -------GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGT-CSEEEESSCCS
T ss_pred             -------hhhCCccccCCCEEEEecceeccHHHHHHHHhcC-CceEeeccccc
Confidence                   11111 2337999999999754556777778776 66666666543

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.71  E-value=0.56  Score=31.96  Aligned_cols=23  Identities=35%  Similarity=0.381  Sum_probs=18.8

Q ss_pred             eEEEEEeCCCCC----------cccCCCEEEec
Q 019822           30 GKVVESAGDEVK----------EVKEGDIVIPT   52 (335)
Q Consensus        30 ~G~V~~vG~~v~----------~~~~Gd~V~~~   52 (335)
                      .|+|+++|+...          .+++||+|...
T Consensus        39 ~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~   71 (99)
T d1p3ha_          39 EGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS   71 (99)
T ss_dssp             EEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred             EEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence            799999999742          37899999754

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.67  E-value=0.54  Score=37.61  Aligned_cols=34  Identities=32%  Similarity=0.392  Sum_probs=28.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHH-HHcCCCEEEEEc
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGA-RMHGAAKIIGID  182 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la-~~~G~~~V~~~~  182 (335)
                      --++.+|+|.|.|.||..+++++ +..|+ +|++++
T Consensus        28 ~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             CTTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            34688999999999999999887 56899 888776

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.61  E-value=0.42  Score=37.66  Aligned_cols=33  Identities=18%  Similarity=0.213  Sum_probs=27.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHH--cCCCEEEEEcCCh
Q 019822          152 SSVAVLGLGTVGLGAVDGARM--HGAAKIIGIDKNP  185 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~--~G~~~V~~~~~~~  185 (335)
                      .+|+|+|+|+.|+.++..++.  .|. +|++++..+
T Consensus         2 ~kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQL   36 (230)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSS
T ss_pred             CeEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCC
Confidence            479999999999999986654  477 999998765

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.57  E-value=0.68  Score=33.41  Aligned_cols=66  Identities=15%  Similarity=0.123  Sum_probs=41.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHH----HHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCcc
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGA----RMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVD  224 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la----~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d  224 (335)
                      ++.++++|+|+|.+|.-++..+    +..|. +|+.+.+++.-+            ...  .+.+..+.+.+....+|++
T Consensus        35 ~~~k~i~IvGgG~~G~E~A~~l~~~~~~~g~-~Vt~i~~~~~~l------------~~~--~~~~~~~~~~~~l~~~GV~   99 (137)
T d1m6ia2          35 REVKSITIIGGGFLGSELACALGRKARALGT-EVIQLFPEKGNM------------GKI--LPEYLSNWTMEKVRREGVK   99 (137)
T ss_dssp             HHCSEEEEECCSHHHHHHHHHHHHHHHHHTC-EEEEECSSSSTT------------TTT--SCHHHHHHHHHHHHTTTCE
T ss_pred             hcCCEEEEECCCHHHHHHHHHHHHHHHhcCC-EEEEecccccCC------------ccc--CCHHHHHHHHHHHHhCCcE
Confidence            4568999999999885433333    46788 999998653321            100  0144555666655566888


Q ss_pred             EEEEc
Q 019822          225 YCFEC  229 (335)
Q Consensus       225 ~vid~  229 (335)
                      +.+++
T Consensus       100 ~~~~~  104 (137)
T d1m6ia2         100 VMPNA  104 (137)
T ss_dssp             EECSC
T ss_pred             EEeCC
Confidence            87765

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=85.11  E-value=3.3  Score=34.05  Aligned_cols=55  Identities=15%  Similarity=0.167  Sum_probs=38.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHhcCCceEe
Q 019822          146 AKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK--NPWKKEKGKAFGMTDFI  200 (335)
Q Consensus       146 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~--~~~~~~~~~~lga~~v~  200 (335)
                      ..+.+++.|+...+|.-|.+++..++..|..-++++..  ++.+.+.++.+|+..+.
T Consensus        56 g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~  112 (310)
T d1y7la1          56 GTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVL  112 (310)
T ss_dssp             TSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             CCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEe
Confidence            34567776665577999999999999999854444432  33566667788876543

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.08  E-value=0.17  Score=40.85  Aligned_cols=45  Identities=18%  Similarity=0.073  Sum_probs=32.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  193 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  193 (335)
                      +..++.+||=+|+|+ |..+..+++. +..+|++++-++...+.+++
T Consensus        48 ~~~~g~~vLDlGcG~-G~~~~~~~~~-~~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          48 GGLQGDTLIDIGSGP-TIYQVLAACD-SFQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             TSCCEEEEEESSCTT-CCGGGTTGGG-TEEEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCC-CHhHHHHhcc-ccCcEEEecCCHHHHHHHHH
Confidence            346677888889864 5444445444 44489999999998888754

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=85.05  E-value=4.4  Score=30.15  Aligned_cols=96  Identities=20%  Similarity=0.244  Sum_probs=56.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc---CCCEEEEEcC--ChhhHHHHHhc----C---Cc---------------eEeCCCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMH---GAAKIIGIDK--NPWKKEKGKAF----G---MT---------------DFINPDDE  205 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~---G~~~V~~~~~--~~~~~~~~~~l----g---a~---------------~v~~~~~~  205 (335)
                      +|.|.|-|-+|+++.+.+...   .. +|+++-.  +.+...++-++    |   .+               .+++.++ 
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~-   79 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD-   79 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS-
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC-
Confidence            688999999999999887643   35 7777642  23444444322    1   00               1122222 


Q ss_pred             CchhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          206 PNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       206 ~~~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                       +.+.  .+.+    .++|+|+||+|.-...+.+...+..+ ..-|.++.+..
T Consensus        80 -p~~i--~W~~----~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP~k  124 (169)
T d1hdgo1          80 -PSKL--PWKD----LGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAPAK  124 (169)
T ss_dssp             -GGGS--CHHH----HTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCB
T ss_pred             -hhhC--Cccc----cCCCEEEEecceeccccchhhhccCC-CceEEEecccC
Confidence             1111  1222    27999999999754556777778775 54555555543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=85.04  E-value=0.92  Score=33.24  Aligned_cols=39  Identities=21%  Similarity=0.244  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhH
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKK  188 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~  188 (335)
                      ...+|.|+|+|.+|..++..+...| +.+++.++.++++.
T Consensus         4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            3468999999999999888888777 35899999887653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=85.04  E-value=0.41  Score=38.86  Aligned_cols=30  Identities=30%  Similarity=0.424  Sum_probs=26.8

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      |+|+|+|.+|+.++.-+...|. +|+++++.
T Consensus         6 vvIIGaGi~Gls~A~~La~~G~-~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF   35 (281)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            7899999999998888888999 99999864

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=84.98  E-value=0.73  Score=37.34  Aligned_cols=30  Identities=23%  Similarity=0.423  Sum_probs=23.0

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      +|||+|+ |-+|..++..+...|.  ++++++.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~--~v~~~~~   32 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN--LIALDVH   32 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE--EEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC--EEEEECC
Confidence            5899987 9999999988877664  5555543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=84.74  E-value=0.81  Score=33.34  Aligned_cols=37  Identities=16%  Similarity=0.184  Sum_probs=30.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKK  188 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~  188 (335)
                      .+|.|+|+|.+|..++.++...+..+++.++.++++.
T Consensus         2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~   38 (142)
T d1uxja1           2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVP   38 (142)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHH
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccc
Confidence            4788999999999988877777766899999877653

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=84.73  E-value=0.86  Score=33.45  Aligned_cols=48  Identities=13%  Similarity=0.057  Sum_probs=38.7

Q ss_pred             hhhhhHHHHHhcCCCCCCEEEEE--cCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          135 FTTGYGAAWKEAKVEKGSSVAVL--GLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       135 ~~ta~~~l~~~~~~~~~~~VlI~--G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      +.|....+  ..+..+++.++|+  |+|-+|+-+++.+...|. +|..+++.+
T Consensus        25 v~t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~   74 (156)
T d1djqa2          25 QLTPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVH   74 (156)
T ss_dssp             EECHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred             EECHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCC
Confidence            34666644  3567788888888  779999999999999999 999998764

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.59  E-value=0.3  Score=38.55  Aligned_cols=33  Identities=15%  Similarity=0.153  Sum_probs=27.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcC-------CCEEEEEcCCh
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHG-------AAKIIGIDKNP  185 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G-------~~~V~~~~~~~  185 (335)
                      -+|+|+|+|+.|++++..+...|       + +|.+.+..+
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~-~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDM-AVDMLEMLP   42 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCE-EEEEEESSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCC-ceEEEecCC
Confidence            48999999999999998887666       4 788888654

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.47  E-value=1.9  Score=35.89  Aligned_cols=102  Identities=22%  Similarity=0.273  Sum_probs=59.6

Q ss_pred             HhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHH----HhcCCceEeCCCCCCchhHHHHHHhhh
Q 019822          144 KEAKVEKGSSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKG----KAFGMTDFINPDDEPNKSISELVKGIT  218 (335)
Q Consensus       144 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~~  218 (335)
                      .....++|++||=.-+++ |.=+.+++..++ -..+++.+.++.|...+    +++|...++..+.   ...  .+ ...
T Consensus       110 ~~l~~~~g~~vlD~CAap-GgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~---d~~--~~-~~~  182 (313)
T d1ixka_         110 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHS---SSL--HI-GEL  182 (313)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESS---CGG--GG-GGG
T ss_pred             hcccCCccceeeecccch-hhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccc---ccc--cc-ccc
Confidence            345688999988773322 223444555443 22799999999988765    5567654433332   111  01 111


Q ss_pred             CCCCccEEE-E--cCCC-------------------------hHHHHHHHHhhccCCeEEEEEc
Q 019822          219 HGMGVDYCF-E--CTGV-------------------------PSLLSEALETTKVGKGKVIVIG  254 (335)
Q Consensus       219 ~g~g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g  254 (335)
                      . ..||.|+ |  |+|.                         ...+..+++.++++ |++|..-
T Consensus       183 ~-~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~g-G~lVYsT  244 (313)
T d1ixka_         183 N-VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYST  244 (313)
T ss_dssp             C-CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             c-ccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCC-cEEEEee
Confidence            2 2688886 6  5554                         11566777888886 8766553

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.19  E-value=0.94  Score=37.86  Aligned_cols=33  Identities=18%  Similarity=0.380  Sum_probs=29.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019822          150 KGSSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  183 (335)
Q Consensus       150 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~  183 (335)
                      ..++|||+|+ |-+|..++..+...|. +|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence            4578999987 9999999999999999 9999975

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=84.13  E-value=1.3  Score=37.35  Aligned_cols=31  Identities=23%  Similarity=0.366  Sum_probs=25.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019822          153 SVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  183 (335)
Q Consensus       153 ~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~  183 (335)
                      +|||+|+ |-+|..++..+...|...|+.+++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6899987 999999999998889855677764

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.06  E-value=0.43  Score=39.81  Aligned_cols=31  Identities=39%  Similarity=0.583  Sum_probs=27.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      -|+|+|+|..|+.++.-|...|+ +|+++++.
T Consensus        21 DVvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~   51 (317)
T d1qo8a2          21 QVLVVGAGSAGFNASLAAKKAGA-NVILVDKA   51 (317)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            48999999999999988888999 99999864

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=83.99  E-value=0.76  Score=37.85  Aligned_cols=32  Identities=19%  Similarity=0.222  Sum_probs=27.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      ++|||+|+ |-+|..++..+...|. .|+++++.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcC-EEEEecCc
Confidence            58999987 9999999999988898 77777643

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=83.99  E-value=1.2  Score=32.37  Aligned_cols=37  Identities=27%  Similarity=0.294  Sum_probs=30.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhH
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKK  188 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~  188 (335)
                      .+|.|+|+|.+|..++..+...+. .+++.++.++++.
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~   39 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERV   39 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence            568899999999999988887775 4899999887654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.98  E-value=0.6  Score=38.74  Aligned_cols=31  Identities=26%  Similarity=0.385  Sum_probs=27.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019822          152 SSVAVLGL-GTVGLGAVDGARMHGAAKIIGIDK  183 (335)
Q Consensus       152 ~~VlI~G~-g~vG~~ai~la~~~G~~~V~~~~~  183 (335)
                      ++|||+|+ |-+|..++..+...|. +|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            68999987 9999999999988999 9999875

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=83.86  E-value=1  Score=32.94  Aligned_cols=37  Identities=32%  Similarity=0.509  Sum_probs=30.2

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCChhhH
Q 019822          152 SSVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNPWKK  188 (335)
Q Consensus       152 ~~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~  188 (335)
                      ++|.|+|+|.+|..++..+...| +.+++.++.++++.
T Consensus         2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~   39 (146)
T d1hyha1           2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKV   39 (146)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence            57889999999999888777766 35899999887763

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=83.65  E-value=0.45  Score=39.81  Aligned_cols=31  Identities=29%  Similarity=0.373  Sum_probs=27.6

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      |||+|+|..|+.++.-|...|+ +|++++..+
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~-~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGL-STIVLSLIP   38 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence            8999999999999999999999 899998643

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=83.64  E-value=1.5  Score=33.58  Aligned_cols=90  Identities=24%  Similarity=0.240  Sum_probs=58.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEE
Q 019822          148 VEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCF  227 (335)
Q Consensus       148 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vi  227 (335)
                      +.++.+||=+|+|. |..+..+     . ++++++.+++..+.+++.+...+. .+.   .++     . .....+|+|+
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~~~~-~d~---~~l-----~-~~~~~fD~I~   96 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPL-----K-IKIGVEPSERMAEIARKRGVFVLK-GTA---ENL-----P-LKDESFDFAL   96 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHH-----T-CCEEEESCHHHHHHHHHTTCEEEE-CBT---TBC-----C-SCTTCEEEEE
T ss_pred             hCCCCeEEEECCCC-ccccccc-----c-eEEEEeCChhhccccccccccccc-ccc---ccc-----c-cccccccccc
Confidence            45677899999863 5444443     2 678999999999999887654322 221   111     0 1223799998


Q ss_pred             EcCC-----Ch-HHHHHHHHhhccCCeEEEEEcc
Q 019822          228 ECTG-----VP-SLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       228 d~~g-----~~-~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ....     .+ ..+..+.+.|+++ |+++....
T Consensus        97 ~~~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~~  129 (208)
T d1vlma_          97 MVTTICFVDDPERALKEAYRILKKG-GYLIVGIV  129 (208)
T ss_dssp             EESCGGGSSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccccccccchhhhhhcCCCC-ceEEEEec
Confidence            6432     22 3578899999997 98877654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=83.62  E-value=2.3  Score=30.92  Aligned_cols=62  Identities=15%  Similarity=0.065  Sum_probs=47.9

Q ss_pred             HHHhcCCCCCCEEEEE-cCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHhcCCceEeCCC
Q 019822          142 AWKEAKVEKGSSVAVL-GLGTVGLGAVDGARMHG-AAKIIGIDKNPWKKEKGKAFGMTDFINPD  203 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~-G~g~vG~~ai~la~~~G-~~~V~~~~~~~~~~~~~~~lga~~v~~~~  203 (335)
                      .++.+++..-+.+++. +.-..-.+++..++.++ ..++++...+++..+.++++|++.++++.
T Consensus        63 ~L~~a~i~~a~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~~~Gad~vi~p~  126 (153)
T d1id1a_          63 VLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQ  126 (153)
T ss_dssp             HHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHHTTCCSEEECHH
T ss_pred             HHHHhccccCCEEEEccccHHHHHHHHHHHHHhCCCCceEEEEcCHHHHHHHHHCCCCEEECHH
Confidence            4577888887777776 34445567778888764 33899999899999999999999998765

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.55  E-value=0.77  Score=37.18  Aligned_cols=45  Identities=16%  Similarity=0.039  Sum_probs=32.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA  193 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~  193 (335)
                      +...+.++|=+|+|+ |...+..+...+. +|++++-++..++.+++
T Consensus        51 g~~~g~~vLDiGcG~-g~~~~~~~~~~~~-~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          51 GEVSGRTLIDIGSGP-TVYQLLSACSHFE-DITMTDFLEVNRQELGR   95 (263)
T ss_dssp             SCSCCSEEEEETCTT-CCGGGTTGGGGCS-EEEEECSCHHHHHHHHH
T ss_pred             CCCCCcEEEEeccCC-CHHHHHHhcccCC-eEEEEeCCHHHHHHHHH
Confidence            456788999999875 4443333444444 99999999999888865

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.55  E-value=5.3  Score=29.53  Aligned_cols=93  Identities=13%  Similarity=0.035  Sum_probs=52.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcC--CC-EEEEEcCChhh---------------HHHHHhcCCceEeCCCCCCchhHHHHH
Q 019822          153 SVAVLGLGTVGLGAVDGARMHG--AA-KIIGIDKNPWK---------------KEKGKAFGMTDFINPDDEPNKSISELV  214 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G--~~-~V~~~~~~~~~---------------~~~~~~lga~~v~~~~~~~~~~~~~~i  214 (335)
                      +|.|+|.|.||..++++.....  .+ +|.++..+...               .+........    ...  ...+... 
T Consensus         6 ~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~-   78 (168)
T d1ebfa1           6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTK----TLP--LDDLIAH-   78 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCB----CCC--HHHHHHH-
T ss_pred             EEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhcccc----ccc--HHHHHHH-
Confidence            5788899999999998876532  21 55555432111               1111111110    111  0112222 


Q ss_pred             HhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEcc
Q 019822          215 KGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       215 ~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                        .......++++||+++.+..+...++|..+ =++|+..-
T Consensus        79 --~~~~~~~~vivd~t~~~~~~~~~~~aL~~G-~hVVTANK  116 (168)
T d1ebfa1          79 --LKTSPKPVILVDNTSSAYIAGFYTKFVENG-ISIATPNK  116 (168)
T ss_dssp             --HTTCSSCEEEEECSCCHHHHTTHHHHHHTT-CEEECCCC
T ss_pred             --hccCCCceEEEEecCChHHHHHHHHHHHcC-CeEEecCc
Confidence              222335689999999987777777788886 56766643

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=83.37  E-value=1.5  Score=32.79  Aligned_cols=96  Identities=21%  Similarity=0.204  Sum_probs=56.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCCh--hhHHHHHhc----C---Cc---------------eEeCCCCCCc
Q 019822          153 SVAVLGLGTVGLGAVDGARMHG-AAKIIGIDKNP--WKKEKGKAF----G---MT---------------DFINPDDEPN  207 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G-~~~V~~~~~~~--~~~~~~~~l----g---a~---------------~v~~~~~~~~  207 (335)
                      +|.|.|-|-+|+++.+.+.... . +|+++....  +.+.++-++    |   .+               .+++.++  +
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~--p   79 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD--P   79 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS--G
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCC--h
Confidence            5788899999999999887653 5 677666432  233333222    1   10               1122221  1


Q ss_pred             hhHHHHHHhhhCCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          208 KSISELVKGITHGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       208 ~~~~~~i~~~~~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                      .+.  .+++    .++|+|+||+|.-...+.+...+..+ ..-|.++.+..
T Consensus        80 ~~i--~W~~----~gvDiViEcTG~f~t~~~~~~hl~~g-akkViiSaP~~  123 (166)
T d1gado1          80 ANL--KWDE----VGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGPSK  123 (166)
T ss_dssp             GGG--CHHH----HTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCCS
T ss_pred             HHC--Cccc----cCCCEEEEccccccCHHHHHHHhcCC-CceEEeecccc
Confidence            111  1122    27999999999654556777788776 65566665543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=83.28  E-value=1.4  Score=35.69  Aligned_cols=72  Identities=18%  Similarity=0.194  Sum_probs=41.9

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCEEEEEc--CChhhHHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCCccEEEEcC
Q 019822          154 VAVLGL-GTVGLGAVDGARMHGAAKIIGID--KNPWKKEKGKAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECT  230 (335)
Q Consensus       154 VlI~G~-g~vG~~ai~la~~~G~~~V~~~~--~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~d~vid~~  230 (335)
                      |||+|+ |-+|..++..+...|..+|++++  .+..+.....++......+.     .+....+.....-...+.++.+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~a   76 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDK-----EDFLIQIMAGEEFGDVEAIFHEG   76 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEH-----HHHHHHHHTTCCCSSCCEEEECC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccc-----hHHHHHHhhhhcccchhhhhhhc
Confidence            799987 99999998888888975788875  22233334444443333222     22333333322333567777554

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=83.26  E-value=0.49  Score=39.46  Aligned_cols=32  Identities=44%  Similarity=0.693  Sum_probs=27.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      -|+|+|+|..|+.++.-|...|+ +|+++++.+
T Consensus        25 DVvVIG~G~aGl~aA~~la~~G~-~V~llEk~~   56 (322)
T d1d4ca2          25 DVVIIGSGGAGLAAAVSARDAGA-KVILLEKEP   56 (322)
T ss_dssp             SEEEECSSHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            38999999999999988888999 899998643

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=83.12  E-value=4.3  Score=30.33  Aligned_cols=94  Identities=21%  Similarity=0.294  Sum_probs=55.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc----CCCEEEEEcC--ChhhHHHHHhcC-------Cc---------------eEeCCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMH----GAAKIIGIDK--NPWKKEKGKAFG-------MT---------------DFINPDD  204 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~----G~~~V~~~~~--~~~~~~~~~~lg-------a~---------------~v~~~~~  204 (335)
                      +|.|.|-|-+|+++.+.+...    .. +|+++..  +.+...++-++.       ..               .++..++
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~-~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDI-EIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCe-EEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            578899999999999877543    23 5666652  334444442221       10               1122221


Q ss_pred             CCchhHHHHHHhhh-CCCCccEEEEcCCChHHHHHHHHhhccCCeEEEEEccCC
Q 019822          205 EPNKSISELVKGIT-HGMGVDYCFECTGVPSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       205 ~~~~~~~~~i~~~~-~g~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                         +      .++. ...++|+|+||+|.-.....+...|..+ ..-|.++.+.
T Consensus        82 ---p------~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~G-akkViiSAP~  125 (173)
T d1obfo1          82 ---P------AQLPWGALKVDVVLECTGFFTTKEKAGAHIKGG-AKKVIISAPG  125 (173)
T ss_dssp             ---G------GGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHT-CSEEEESSCC
T ss_pred             ---H------HHCcccccccceEEEecccccCHHHHHHHhccC-CcceEEecCC
Confidence               1      1111 2338999999999654556777888776 6666666554

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=83.10  E-value=1.4  Score=32.73  Aligned_cols=40  Identities=18%  Similarity=0.199  Sum_probs=33.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhH
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKK  188 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~  188 (335)
                      .+..+|.|+|+|.+|..++..+...|. .+++.++.++++.
T Consensus        18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            456799999999999999999998875 5899999876553

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.83  E-value=0.63  Score=38.96  Aligned_cols=32  Identities=22%  Similarity=0.290  Sum_probs=28.3

Q ss_pred             EE-EEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019822          153 SV-AVLGL-GTVGLGAVDGARMHGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~V-lI~G~-g~vG~~ai~la~~~G~~~V~~~~~~~  185 (335)
                      +| ||+|+ |-+|..++..+...|+ +|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            57 99987 9999999999988999 999999754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.65  E-value=6.8  Score=29.67  Aligned_cols=108  Identities=20%  Similarity=0.214  Sum_probs=64.1

Q ss_pred             HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc-eEeCCCCCCchhHHHHHHhh
Q 019822          143 WKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT-DFINPDDEPNKSISELVKGI  217 (335)
Q Consensus       143 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~  217 (335)
                      .......+++.++=.++|+ |-.+-.+++...-.+|+++|++++..+.+++    ++.. ..+..+-   .++...+..+
T Consensus        16 i~~l~~~~~~~~lD~t~G~-Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f---~~~~~~~~~~   91 (192)
T d1m6ya2          16 IEFLKPEDEKIILDCTVGE-GGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSY---READFLLKTL   91 (192)
T ss_dssp             HHHHCCCTTCEEEETTCTT-SHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCG---GGHHHHHHHT
T ss_pred             HHhhCCCCCCEEEEecCCC-cHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHH---hhHHHHHHHc
Confidence            3445677888665444444 3344455554432399999999999988854    3321 2333332   3444444444


Q ss_pred             hCCCCccEEE-EcCCC---------------hHHHHHHHHhhccCCeEEEEEccCC
Q 019822          218 THGMGVDYCF-ECTGV---------------PSLLSEALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       218 ~~g~g~d~vi-d~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~~  257 (335)
                      .. ..+|.|+ |. |-               ...+..+.+.|.++ |+++.+...+
T Consensus        92 ~~-~~vdgIl~Dl-GvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~g-G~l~ii~f~s  144 (192)
T d1m6ya2          92 GI-EKVDGILMDL-GVSTYQLKGENRELENLKEFLKKAEDLLNPG-GRIVVISFHS  144 (192)
T ss_dssp             TC-SCEEEEEEEC-SCCHHHHHTSHTHHHHHHHHHHHGGGGEEEE-EEEEEEESSH
T ss_pred             CC-CCcceeeecc-chhHhhhhhhhccchhHHHHHHHHHHhcCCC-Ceeeeecccc
Confidence            33 3788775 63 21               12456777788887 9888876654

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.48  E-value=8.5  Score=29.30  Aligned_cols=96  Identities=17%  Similarity=0.159  Sum_probs=56.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhh----------HHHHHhcCCceEeCCCCCCchhHHHHHHhhhCCCC
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWK----------KEKGKAFGMTDFINPDDEPNKSISELVKGITHGMG  222 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~----------~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g  222 (335)
                      +|++.|.+.+|..+++.+...|. +|.++.+.+++          .+++++.+.. ++...+.....+.+.+++.    .
T Consensus         2 kiv~~~~~~~g~~~l~~L~~~g~-~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~-~~~~~~~~~~~~~~~i~~~----~   75 (203)
T d2blna2           2 KTVVFAYHDMGCLGIEALLAAGY-EISAIFTHTDNPGEKAFYGSVARLAAERGIP-VYAPDNVNHPLWVERIAQL----S   75 (203)
T ss_dssp             EEEEEECHHHHHHHHHHHHHTTC-EEEEEECCCC------CCCCHHHHHHHHTCC-EECCSCCCSHHHHHHHHHT----C
T ss_pred             eEEEEecCHHHHHHHHHHHHCCC-CEEEEEcCCCCCCcccccCHHHHHHHHcCCc-ceecccccchhhhhhhhhh----c
Confidence            47777888899999999888898 77655533322          2445566654 3332221225555666553    7


Q ss_pred             ccEEEEcCCChHHHH-HHHHhhccCCeEEEEEccCC
Q 019822          223 VDYCFECTGVPSLLS-EALETTKVGKGKVIVIGVGV  257 (335)
Q Consensus       223 ~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~  257 (335)
                      +|+++-+.... .+. ..++ ..+. |.+-.-....
T Consensus        76 ~Dlii~~g~~~-ii~~~il~-~~~~-~~iN~H~slL  108 (203)
T d2blna2          76 PDVIFSFYYRH-LIYDEILQ-LAPA-GAFNLHGSLL  108 (203)
T ss_dssp             CSEEEEESCCS-CCCHHHHT-TCTT-CEEEEESSCT
T ss_pred             ccceeeeeccc-chhcccch-hhHH-HHHHHhhhcc
Confidence            89998775543 333 3333 3354 6666654433

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=82.28  E-value=2  Score=33.99  Aligned_cols=96  Identities=9%  Similarity=0.071  Sum_probs=56.3

Q ss_pred             CEEEEEcCCH----HHHHHHHHHHHc--CCCEEEE-EcCChhhHHH-HHhcCCceEeCCCCCCchhHHHHHHhhhCCCCc
Q 019822          152 SSVAVLGLGT----VGLGAVDGARMH--GAAKIIG-IDKNPWKKEK-GKAFGMTDFINPDDEPNKSISELVKGITHGMGV  223 (335)
Q Consensus       152 ~~VlI~G~g~----vG~~ai~la~~~--G~~~V~~-~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~g~g~  223 (335)
                      =+|.|+|.|.    ++...+...+..  ++ ++++ .+++.++.+. +++++....-.+.+     +.+.+    ....+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~-~ivav~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~----~~~~i   86 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQF-QIVALYNPTLKSSLQTIEQLQLKHATGFDS-----LESFA----QYKDI   86 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTE-EEEEEECSCHHHHHHHHHHTTCTTCEEESC-----HHHHH----HCTTC
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCe-EEEEEEcCCHHHHHHHHHhcccccceeecc-----hhhcc----ccccc
Confidence            4788999765    334334444443  46 7765 5566665544 57777543222222     32222    23479


Q ss_pred             cEEEEcCCChHHHHHHHHhhccC----CeEEEEEccCC
Q 019822          224 DYCFECTGVPSLLSEALETTKVG----KGKVIVIGVGV  257 (335)
Q Consensus       224 d~vid~~g~~~~~~~~~~~l~~~----~G~~v~~g~~~  257 (335)
                      |+|+.|+......+.+..++..+    .+.-|++.-+.
T Consensus        87 D~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKPl  124 (237)
T d2nvwa1          87 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL  124 (237)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred             ceeeccCCCcchhhHHHHHHHhcccccCCceEEEeccc
Confidence            99999998776777777777652    02457776554

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.15  E-value=1.7  Score=34.13  Aligned_cols=43  Identities=21%  Similarity=0.263  Sum_probs=34.8

Q ss_pred             HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          142 AWKEAKVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      +....+--.+.+|++.|+|..|...+++....+.++++.+++.
T Consensus        17 ~~~~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          17 LKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             HHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             HHHhCCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecce
Confidence            3333344577899999999999999999998899899999864

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=82.06  E-value=0.63  Score=37.47  Aligned_cols=30  Identities=33%  Similarity=0.503  Sum_probs=27.2

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019822          154 VAVLGLGTVGLGAVDGARMHGAAKIIGIDKN  184 (335)
Q Consensus       154 VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~  184 (335)
                      ++|+|+|+.|+.++..|...|. +|..+++.
T Consensus         4 viVIG~G~aG~~aA~~aa~~G~-~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSGGMAAARRAARHNA-KVALVEKS   33 (259)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-eEEEEecC
Confidence            6888999999999999999999 99999864

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.02  E-value=0.61  Score=40.13  Aligned_cols=32  Identities=22%  Similarity=0.448  Sum_probs=25.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHH------cCCCEEEEEcCCh
Q 019822          153 SVAVLGLGTVGLGAVDGARM------HGAAKIIGIDKNP  185 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~------~G~~~V~~~~~~~  185 (335)
                      -|+|+|+|+.|++++..+..      .|. +|.++++..
T Consensus        34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl-~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGAGPAGLSAATRLKQLAAQHEKDL-RVCLVEKAA   71 (380)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHHHHTTCCC-CEEEECSSS
T ss_pred             CEEEECCCHHHHHHHHHHHhhhhhhcCCC-EEEEEcCCC
Confidence            48899999999886655443      688 999999653

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=81.83  E-value=1.6  Score=32.64  Aligned_cols=72  Identities=14%  Similarity=0.101  Sum_probs=41.9

Q ss_pred             CCEEEEEcCCHHHHH--HHHHHHHc-C--CCEEEEEcCChhhHHHH--------HhcCCc-eEeCCCCCCchhHHHHHHh
Q 019822          151 GSSVAVLGLGTVGLG--AVDGARMH-G--AAKIIGIDKNPWKKEKG--------KAFGMT-DFINPDDEPNKSISELVKG  216 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~--ai~la~~~-G--~~~V~~~~~~~~~~~~~--------~~lga~-~v~~~~~~~~~~~~~~i~~  216 (335)
                      .-+|.|+|+|++|..  ...+++.. .  ..+++.++.++++.+..        ...+.. .+....     +..+.+  
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~eal--   75 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT-----DPEEAF--   75 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES-----CHHHHH--
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC-----Chhhcc--
Confidence            346889998766533  33444322 2  13899999999887632        223432 222222     222223  


Q ss_pred             hhCCCCccEEEEcCCCh
Q 019822          217 ITHGMGVDYCFECTGVP  233 (335)
Q Consensus       217 ~~~g~g~d~vid~~g~~  233 (335)
                          ++.|+|+.+.+..
T Consensus        76 ----~~AD~Vvitag~~   88 (167)
T d1u8xx1          76 ----TDVDFVMAHIRVG   88 (167)
T ss_dssp             ----SSCSEEEECCCTT
T ss_pred             ----CCCCEEEECCCcC
Confidence                2799999999864

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=81.71  E-value=5.6  Score=33.83  Aligned_cols=54  Identities=24%  Similarity=0.234  Sum_probs=38.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHhcCCceEeC
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDK---NPWKKEKGKAFGMTDFIN  201 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~---~~~~~~~~~~lga~~v~~  201 (335)
                      +.+++.+|+--.+|+.|.+++.+++.+|. +++++..   ++++.+.++.+|++-+..
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGi-k~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGY-RARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTC-EEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCC-CEEEEeeccccccccccccccCcceeec
Confidence            35666654434569999999999999999 5555442   446777789999876543

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.65  E-value=0.55  Score=38.25  Aligned_cols=34  Identities=24%  Similarity=0.367  Sum_probs=27.4

Q ss_pred             CCEEEEEcCCHHHHHHHH-HHHHcCCCEEEEEcCCh
Q 019822          151 GSSVAVLGLGTVGLGAVD-GARMHGAAKIIGIDKNP  185 (335)
Q Consensus       151 ~~~VlI~G~g~vG~~ai~-la~~~G~~~V~~~~~~~  185 (335)
                      +.-|+|+|+|+.|+.++. ||+..|. +|.++++.+
T Consensus        33 e~DViVIGaGpaGL~aA~~LA~~~G~-~V~vlE~~~   67 (278)
T d1rp0a1          33 ETDVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSV   67 (278)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSS
T ss_pred             CCCEEEECCCHHHHHHHHHHHHccCC-eEEEEecCC
Confidence            445999999999998765 5566799 999999764

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.54  E-value=6.7  Score=32.24  Aligned_cols=55  Identities=25%  Similarity=0.251  Sum_probs=37.7

Q ss_pred             HhcCCCCCCEEEEE-cCCHHHHHHHHHHHHcCCCEEEEEc---CChhhHHHHHhcCCceE
Q 019822          144 KEAKVEKGSSVAVL-GLGTVGLGAVDGARMHGAAKIIGID---KNPWKKEKGKAFGMTDF  199 (335)
Q Consensus       144 ~~~~~~~~~~VlI~-G~g~vG~~ai~la~~~G~~~V~~~~---~~~~~~~~~~~lga~~v  199 (335)
                      +...+.++...+|. .+|..|.+++..++.+|. +.+++.   .++.+.+.++.+|+..+
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~-~~~iv~p~~~~~~k~~~i~~~Ga~vi  115 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGY-KLIITMPASMSTERRIILLAFGVELV  115 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTC-EEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhcc-ceEEeehhhhhhhhhhhhhccCcceE
Confidence            33445555555555 569999999999999998 444433   33467777888887644

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=81.52  E-value=1.3  Score=32.09  Aligned_cols=37  Identities=16%  Similarity=0.184  Sum_probs=30.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHH
Q 019822          153 SVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKKE  189 (335)
Q Consensus       153 ~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~~  189 (335)
                      +|.|+|+|.+|..++..+...+. .++..++.++++.+
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~   39 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQ   39 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccch
Confidence            57888999999998888887773 58999998876644

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.39  E-value=9.4  Score=29.31  Aligned_cols=103  Identities=15%  Similarity=-0.027  Sum_probs=59.9

Q ss_pred             HHHhcCCCCCCEEEEE-cC---CHHHHHHHHHHHHcCCCEEEEEcCChhh-------HHHHHhcCCceEeCCCCCCchhH
Q 019822          142 AWKEAKVEKGSSVAVL-GL---GTVGLGAVDGARMHGAAKIIGIDKNPWK-------KEKGKAFGMTDFINPDDEPNKSI  210 (335)
Q Consensus       142 l~~~~~~~~~~~VlI~-G~---g~vG~~ai~la~~~G~~~V~~~~~~~~~-------~~~~~~lga~~v~~~~~~~~~~~  210 (335)
                      +.+...-.+..+|+|+ |.   |+=|++++..++..|+ +|.++...+.+       .+..++++...+ +..+   .. 
T Consensus        31 i~~~~~~~~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~-~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~-  104 (211)
T d2ax3a2          31 MEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVK-DVLVVFLGKKKTPDCEYNYGLYKKFGGKVV-EQFE---PS-  104 (211)
T ss_dssp             HHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSS-EEEEEECCSSCCHHHHHHHHHHHHTTCCEE-SCCC---GG-
T ss_pred             HHHhcccccCCcEEEEECCCCCchhHHHHHHHHHhcCC-eeEEEecCccCCcHHHHHHHHHHHcCCccc-cccc---cc-
Confidence            4444443445677777 64   5667888888888898 77665543321       222344554432 2221   11 


Q ss_pred             HHHHHhhhCCCCccEEEEcCCC-------hHHHHHHHHhhccCCeEEEEEccCCC
Q 019822          211 SELVKGITHGMGVDYCFECTGV-------PSLLSEALETTKVGKGKVIVIGVGVD  258 (335)
Q Consensus       211 ~~~i~~~~~g~g~d~vid~~g~-------~~~~~~~~~~l~~~~G~~v~~g~~~~  258 (335)
                           .   -..+|+++|+.=+       ...+..+.+.+......++.+..+++
T Consensus       105 -----~---~~~~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPSG  151 (211)
T d2ax3a2         105 -----I---LNEFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSG  151 (211)
T ss_dssp             -----G---GGGCSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCTT
T ss_pred             -----c---ccCceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCcc
Confidence                 0   1268999998722       22456677777655356888887877

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=81.26  E-value=2  Score=32.17  Aligned_cols=73  Identities=11%  Similarity=0.255  Sum_probs=43.4

Q ss_pred             CCCEEEEEcCCHHHHHH---HHHHHH--cCCCEEEEEcCChhhHHHH--------HhcCCc-eEeCCCCCCchhHHHHHH
Q 019822          150 KGSSVAVLGLGTVGLGA---VDGARM--HGAAKIIGIDKNPWKKEKG--------KAFGMT-DFINPDDEPNKSISELVK  215 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~a---i~la~~--~G~~~V~~~~~~~~~~~~~--------~~lga~-~v~~~~~~~~~~~~~~i~  215 (335)
                      |.-+|.|+|+|.+|...   ..+++.  +...+++.++.++++.+..        ..++.. .+....     +..+.+ 
T Consensus         1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~t-----d~~eaL-   74 (171)
T d1obba1           1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTM-----NLDDVI-   74 (171)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEES-----CHHHHH-
T ss_pred             CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeC-----Chhhcc-
Confidence            45578999999888542   223432  2224999999998876532        224432 222222     222223 


Q ss_pred             hhhCCCCccEEEEcCCCh
Q 019822          216 GITHGMGVDYCFECTGVP  233 (335)
Q Consensus       216 ~~~~g~g~d~vid~~g~~  233 (335)
                           .+.|+|+.+++..
T Consensus        75 -----~dad~Vv~~~~~g   87 (171)
T d1obba1          75 -----IDADFVINTAMVG   87 (171)
T ss_dssp             -----TTCSEEEECCCTT
T ss_pred             -----cCCCeEeeecccc
Confidence                 2789999988754

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.76  E-value=1.8  Score=32.11  Aligned_cols=39  Identities=21%  Similarity=0.374  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCChhhH
Q 019822          150 KGSSVAVLGLGTVGLGAVDGARMHGA-AKIIGIDKNPWKK  188 (335)
Q Consensus       150 ~~~~VlI~G~g~vG~~ai~la~~~G~-~~V~~~~~~~~~~  188 (335)
                      +..+|.|+|+|.+|..++..+...|. .+++.++.++++.
T Consensus        18 ~~~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a   57 (159)
T d2ldxa1          18 SRCKITVVGVGDVGMACAISILLKGLADELALVDADTDKL   57 (159)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhh
Confidence            34579999999999999998888775 4899999887653

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.48  E-value=0.48  Score=37.56  Aligned_cols=49  Identities=12%  Similarity=0.026  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHhcCCce
Q 019822          149 EKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKAFGMTD  198 (335)
Q Consensus       149 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~lga~~  198 (335)
                      .++++|+|+|+|.+++-++.+|...+. ....++..+.-++.++..|+..
T Consensus        37 ~~gk~VvVIGgGNVAlD~aR~l~r~~~-~l~~tdi~~~~l~~l~~~g~~~   85 (225)
T d1cjca1          37 LSCDTAVILGQGNVALDVARILLTPPD-HLEKTDITEAALGALRQSRVKT   85 (225)
T ss_dssp             TTSSEEEEESCSHHHHHHHHHHHSCGG-GGTTSCCCHHHHHHHHTCCCCE
T ss_pred             ccCceEEEECCchhHHHHHHHHhcCHH-hhcCCCCcHHHHHHHhccCCCe
Confidence            358999999999999999998876432 2233333444444444444443

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=80.30  E-value=2.1  Score=32.38  Aligned_cols=102  Identities=16%  Similarity=0.107  Sum_probs=58.3

Q ss_pred             hHHHHHhcC-CCCCCEEEEEcC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCCc---eEeCCCCCCch
Q 019822          139 YGAAWKEAK-VEKGSSVAVLGL--GTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGMT---DFINPDDEPNK  208 (335)
Q Consensus       139 ~~~l~~~~~-~~~~~~VlI~G~--g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~  208 (335)
                      -.++|.... ...+.+||=+.+  |.+|+.+   + ..|+++|+.++.+++..+.+++    ++..   .++..      
T Consensus        29 realFn~l~~~~~~~~vLDlfaGsG~~g~ea---~-srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~------   98 (182)
T d2fhpa1          29 KESIFNMIGPYFDGGMALDLYSGSGGLAIEA---V-SRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKM------   98 (182)
T ss_dssp             HHHHHHHHCSCCSSCEEEETTCTTCHHHHHH---H-HTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES------
T ss_pred             HHHHHHHHHHhcCCCEEEEccccccccccee---e-ecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccc------
Confidence            344555543 457888887743  6666533   2 3788799999999988777643    4432   23322      


Q ss_pred             hHHHHHHhh-hCCCCccEEE-EcC---C-ChHHHHHHHH--hhccCCeEEE
Q 019822          209 SISELVKGI-THGMGVDYCF-ECT---G-VPSLLSEALE--TTKVGKGKVI  251 (335)
Q Consensus       209 ~~~~~i~~~-~~g~g~d~vi-d~~---g-~~~~~~~~~~--~l~~~~G~~v  251 (335)
                      +..+.++++ ..+..||+|| |.-   . ....++.+.+  .|.++ |.++
T Consensus        99 D~~~~l~~~~~~~~~fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~-giIi  148 (182)
T d2fhpa1          99 DANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNE-AVIV  148 (182)
T ss_dssp             CHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             cchhhhhhhcccCCCcceEEechhhhhhHHHHHHHHHHHCCCCCCC-EEEE
Confidence            344444443 2355799998 531   1 1224444443  36775 6554

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=80.18  E-value=12  Score=30.67  Aligned_cols=99  Identities=18%  Similarity=0.202  Sum_probs=57.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHh----cCC--c--eEeCCCCCCchhHHHHHHhh-
Q 019822          147 KVEKGSSVAVLGLGTVGLGAVDGARMHGAAKIIGIDKNPWKKEKGKA----FGM--T--DFINPDDEPNKSISELVKGI-  217 (335)
Q Consensus       147 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~V~~~~~~~~~~~~~~~----lga--~--~v~~~~~~~~~~~~~~i~~~-  217 (335)
                      +..++.+||=+.+++ |...+.+++ .|+ +|+.++.++...+.+++    .|.  .  ..+.      .|..+.+++. 
T Consensus       129 ~~~~~~rVLdlf~~t-G~~sl~aa~-~GA-~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~------~D~~~~l~~~~  199 (309)
T d2igta1         129 TADRPLKVLNLFGYT-GVASLVAAA-AGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC------EDAMKFIQREE  199 (309)
T ss_dssp             HSSSCCEEEEETCTT-CHHHHHHHH-TTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC------SCHHHHHHHHH
T ss_pred             hccCCCeEEEecCCC-cHHHHHHHh-CCC-eEEEEeChHHHHHHHHHhhhhhcccCCcEEEEe------CCHHHhHHHHh
Confidence            456788999886532 334444443 588 99999999998888754    232  1  1222      2344444432 


Q ss_pred             hCCCCccEEE-EcC----CC-----------hHHHHHHHHhhccCCeEEEEEcc
Q 019822          218 THGMGVDYCF-ECT----GV-----------PSLLSEALETTKVGKGKVIVIGV  255 (335)
Q Consensus       218 ~~g~g~d~vi-d~~----g~-----------~~~~~~~~~~l~~~~G~~v~~g~  255 (335)
                      ..++.||+|| |.-    +.           ...+..+...+.++ |.++++..
T Consensus       200 ~~~~~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~-g~~ll~t~  252 (309)
T d2igta1         200 RRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPK-ALGLVLTA  252 (309)
T ss_dssp             HHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTT-CCEEEEEE
T ss_pred             hcCCCCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCC-CCEEEEec
Confidence            2355899997 411    10           11334556677786 76555544