Citrus Sinensis ID: 019824
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 335 | 2.2.26 [Sep-21-2011] | |||||||
| Q8GY91 | 329 | Putative L-ascorbate pero | yes | no | 0.898 | 0.914 | 0.605 | 1e-104 | |
| Q1PER6 | 251 | L-ascorbate peroxidase 2, | no | no | 0.644 | 0.860 | 0.390 | 1e-37 | |
| Q6ZJJ1 | 291 | Probable L-ascorbate pero | no | no | 0.632 | 0.728 | 0.394 | 2e-34 | |
| Q0JEQ2 | 291 | Probable L-ascorbate pero | no | no | 0.617 | 0.711 | 0.394 | 2e-34 | |
| Q10N21 | 250 | L-ascorbate peroxidase 1, | no | no | 0.617 | 0.828 | 0.401 | 2e-34 | |
| A2XFC7 | 250 | L-ascorbate peroxidase 1, | N/A | no | 0.617 | 0.828 | 0.401 | 2e-34 | |
| Q01MI9 | 291 | Probable L-ascorbate pero | N/A | no | 0.617 | 0.711 | 0.394 | 2e-34 | |
| A4R606 | 300 | Putative heme-binding per | N/A | no | 0.671 | 0.75 | 0.344 | 4e-33 | |
| P0CP54 | 377 | Cytochrome c peroxidase, | yes | no | 0.617 | 0.549 | 0.357 | 7e-33 | |
| P0CP55 | 377 | Cytochrome c peroxidase, | N/A | no | 0.617 | 0.549 | 0.357 | 7e-33 |
| >sp|Q8GY91|APX6_ARATH Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1 | Back alignment and function desciption |
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Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/317 (60%), Positives = 239/317 (75%), Gaps = 16/317 (5%)
Query: 25 KFKFKF--PAKSQRSSLSTVE--FRANPLTISSSLVNHRGKDGSCNSNRRRRGLLLTAT- 79
KFK KF PAK++ S +T + R++ L + G ++RR+ +LL+
Sbjct: 23 KFKCKFESPAKTRLLSPATEKHVVRSSRAWRIRCLSDDPGSSHVFVASRRKMVVLLSTVQ 82
Query: 80 -LPFLLPLHEFVQDLGAKAESGMSDYLLMKEEVTKVVSKGKAASVLRLAFHDAGTFEMDD 138
L +LP + G AE Y +M+ E+ KVV+KGKAA VLRL FHDAGTFE+DD
Sbjct: 83 LLSHMLPQN------GNAAEI----YPVMQNEIRKVVTKGKAAGVLRLVFHDAGTFELDD 132
Query: 139 NSGGMNGSIVYELERPENAGLNKPLKILEKAKGDVNAIRPVSWADMIALGGAVAVSVCGG 198
+SGG+NGSI YELERPEN GL K LK+L KAK V+ I+PVSWADMI++ G+ AVS+CGG
Sbjct: 133 HSGGINGSIAYELERPENIGLKKSLKVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGG 192
Query: 199 PNIPVPMGRLDSMEPDPEGKLPQETLDASGLKQCFQRKGFSAQELVALSGAHTLGTKGFG 258
P IPV +GRLDS +PDPEGKLP ETL ASGLK+CF+RKGFS QELVALSGAHT+G+KGFG
Sbjct: 193 PTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECFKRKGFSTQELVALSGAHTIGSKGFG 252
Query: 259 NPIVFDNSYYKILLEKPWQSSAGMSSMIGLPSDRALVEDDECLRWIKMYADNQNMFFEDF 318
+P VFDN+YYKILLEKPW S++ M+SM+GLPSD ALV+DDECLRW+K YA++Q+ FFEDF
Sbjct: 253 DPTVFDNAYYKILLEKPWTSTSKMTSMVGLPSDHALVQDDECLRWVKRYAEDQDKFFEDF 312
Query: 319 KNAYVKLVNSGARWRSL 335
NAY+KLVNSGA+W L
Sbjct: 313 TNAYIKLVNSGAKWNML 329
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Plays a key role in hydrogen peroxide removal. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 1EC: 1 |
| >sp|Q1PER6|APX2_ARATH L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q6ZJJ1|APX4_ORYSJ Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q0JEQ2|APX3_ORYSJ Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q10N21|APX1_ORYSJ L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1 | Back alignment and function description |
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| >sp|A2XFC7|APX1_ORYSI L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q01MI9|APX3_ORYSI Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1 | Back alignment and function description |
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| >sp|A4R606|CCPR2_MAGO7 Putative heme-binding peroxidase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=MGG_10368 PE=3 SV=1 | Back alignment and function description |
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| >sp|P0CP54|CCPR_CRYNJ Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CCP1 PE=3 SV=1 | Back alignment and function description |
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| >sp|P0CP55|CCPR_CRYNB Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CCP1 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 335 | ||||||
| 224092480 | 337 | predicted protein [Populus trichocarpa] | 0.919 | 0.913 | 0.746 | 1e-129 | |
| 225430293 | 330 | PREDICTED: putative L-ascorbate peroxida | 0.910 | 0.924 | 0.744 | 1e-127 | |
| 255548910 | 328 | L-ascorbate peroxidase 1, cytosolic, put | 0.943 | 0.963 | 0.702 | 1e-121 | |
| 356515434 | 319 | PREDICTED: putative L-ascorbate peroxida | 0.880 | 0.924 | 0.684 | 1e-112 | |
| 357466209 | 320 | hypothetical protein MTR_3g107060 [Medic | 0.892 | 0.934 | 0.667 | 1e-112 | |
| 255635954 | 319 | unknown [Glycine max] | 0.880 | 0.924 | 0.684 | 1e-112 | |
| 449441908 | 338 | PREDICTED: putative L-ascorbate peroxida | 0.997 | 0.988 | 0.594 | 1e-109 | |
| 356515436 | 347 | PREDICTED: putative L-ascorbate peroxida | 0.880 | 0.850 | 0.626 | 1e-108 | |
| 297802798 | 329 | hypothetical protein ARALYDRAFT_913218 [ | 0.970 | 0.987 | 0.589 | 1e-105 | |
| 312282817 | 330 | unnamed protein product [Thellungiella h | 0.970 | 0.984 | 0.579 | 1e-104 |
| >gi|224092480|ref|XP_002309628.1| predicted protein [Populus trichocarpa] gi|222855604|gb|EEE93151.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/312 (74%), Positives = 261/312 (83%), Gaps = 4/312 (1%)
Query: 27 KFKFPAKSQRSSLSTVEFRANPLTISS--SLVNHRGKDGSCNSNRRRRGLLLTATLPFLL 84
+FKFPAKSQR STV+FRA P + S N G+ C S RR L+ +TLPFL
Sbjct: 27 EFKFPAKSQRPFSSTVKFRAKPFKACAFPSNNNDNGEKDDCFSTRRSL-LVCISTLPFLF 85
Query: 85 PLHEFVQDLGAKA-ESGMSDYLLMKEEVTKVVSKGKAASVLRLAFHDAGTFEMDDNSGGM 143
LHEF++DL AKA +S + Y+L+KEEV KVVSKGKAA VLRL FHDAGTFEMD NSGGM
Sbjct: 86 GLHEFLEDLSAKALQSDTNTYMLIKEEVRKVVSKGKAAGVLRLVFHDAGTFEMDGNSGGM 145
Query: 144 NGSIVYELERPENAGLNKPLKILEKAKGDVNAIRPVSWADMIALGGAVAVSVCGGPNIPV 203
NGSIVYELERPENAGL K LKIL+KAKG+V+AI+ VSWADMIA+ GA AVSVCGGP IPV
Sbjct: 146 NGSIVYELERPENAGLKKSLKILDKAKGEVDAIQQVSWADMIAVAGAEAVSVCGGPTIPV 205
Query: 204 PMGRLDSMEPDPEGKLPQETLDASGLKQCFQRKGFSAQELVALSGAHTLGTKGFGNPIVF 263
+GRLDS+EPD EGKLP+E+LDA GLKQ F+RKG S QELVALSGAHTLG+KGFG+P VF
Sbjct: 206 QLGRLDSLEPDAEGKLPRESLDAPGLKQNFKRKGLSTQELVALSGAHTLGSKGFGSPFVF 265
Query: 264 DNSYYKILLEKPWQSSAGMSSMIGLPSDRALVEDDECLRWIKMYADNQNMFFEDFKNAYV 323
DNSYYKILLEKPW+SS GMSSMIGLPSD ALVEDDECLRWIK YADNQNMFF+DFKNAY+
Sbjct: 266 DNSYYKILLEKPWKSSGGMSSMIGLPSDHALVEDDECLRWIKKYADNQNMFFDDFKNAYI 325
Query: 324 KLVNSGARWRSL 335
KLVNSGARW+SL
Sbjct: 326 KLVNSGARWKSL 337
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225430293|ref|XP_002282677.1| PREDICTED: putative L-ascorbate peroxidase 6 [Vitis vinifera] gi|296082040|emb|CBI21045.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255548910|ref|XP_002515511.1| L-ascorbate peroxidase 1, cytosolic, putative [Ricinus communis] gi|223545455|gb|EEF46960.1| L-ascorbate peroxidase 1, cytosolic, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356515434|ref|XP_003526405.1| PREDICTED: putative L-ascorbate peroxidase 6-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357466209|ref|XP_003603389.1| hypothetical protein MTR_3g107060 [Medicago truncatula] gi|355492437|gb|AES73640.1| hypothetical protein MTR_3g107060 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|255635954|gb|ACU18323.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|449441908|ref|XP_004138724.1| PREDICTED: putative L-ascorbate peroxidase 6-like [Cucumis sativus] gi|449499251|ref|XP_004160766.1| PREDICTED: putative L-ascorbate peroxidase 6-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356515436|ref|XP_003526406.1| PREDICTED: putative L-ascorbate peroxidase 6-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
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| >gi|297802798|ref|XP_002869283.1| hypothetical protein ARALYDRAFT_913218 [Arabidopsis lyrata subsp. lyrata] gi|297315119|gb|EFH45542.1| hypothetical protein ARALYDRAFT_913218 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|312282817|dbj|BAJ34274.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 335 | ||||||
| TAIR|locus:2127766 | 329 | APX6 "ascorbate peroxidase 6" | 0.692 | 0.705 | 0.728 | 2.1e-93 | |
| TAIR|locus:2074914 | 251 | APX2 "ascorbate peroxidase 2" | 0.614 | 0.820 | 0.406 | 7.2e-36 | |
| TAIR|locus:2026616 | 250 | APX1 "ascorbate peroxidase 1" | 0.617 | 0.828 | 0.371 | 1.6e-31 | |
| TAIR|locus:2131586 | 287 | APX3 "ascorbate peroxidase 3" | 0.617 | 0.721 | 0.399 | 2e-31 | |
| TAIR|locus:2125409 | 279 | APX5 "ascorbate peroxidase 5" | 0.611 | 0.734 | 0.397 | 4.2e-31 | |
| ASPGD|ASPL0000029968 | 312 | AN5440 [Emericella nidulans (t | 0.567 | 0.608 | 0.336 | 6.8e-30 | |
| TAIR|locus:2204735 | 426 | TAPX "thylakoidal ascorbate pe | 0.477 | 0.375 | 0.368 | 1.9e-29 | |
| TAIR|locus:2137435 | 372 | SAPX "stromal ascorbate peroxi | 0.483 | 0.435 | 0.360 | 2.2e-29 | |
| UNIPROTKB|O04873 | 421 | O04873 "Thylakoid-bound ascorb | 0.447 | 0.356 | 0.364 | 3.6e-28 | |
| CGD|CAL0000335 | 291 | orf19.584 [Candida albicans (t | 0.492 | 0.567 | 0.352 | 4.1e-28 |
| TAIR|locus:2127766 APX6 "ascorbate peroxidase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 169/232 (72%), Positives = 202/232 (87%)
Query: 104 YLLMKEEVTKVVSKGKAASVLRLAFHDAGTFEMDDNSGGMNGSIVYELERPENAGLNKPL 163
Y +M+ E+ KVV+KGKAA VLRL FHDAGTFE+DD+SGG+NGSI YELERPEN GL K L
Sbjct: 98 YPVMQNEIRKVVTKGKAAGVLRLVFHDAGTFELDDHSGGINGSIAYELERPENIGLKKSL 157
Query: 164 KILEKAKGDVNAIRPVSWADMIALGGAVAVSVCGGPNIPVPMGRLDSMEPDPEGKLPQET 223
K+L KAK V+ I+PVSWADMI++ G+ AVS+CGGP IPV +GRLDS +PDPEGKLP ET
Sbjct: 158 KVLAKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPET 217
Query: 224 LDASGLKQCFQRKGFSAQELVALSGAHTLGTKGFGNPIVFDNSYYKILLEKPWQSSAGMS 283
L ASGLK+CF+RKGFS QELVALSGAHT+G+KGFG+P VFDN+YYKILLEKPW S++ M+
Sbjct: 218 LSASGLKECFKRKGFSTQELVALSGAHTIGSKGFGDPTVFDNAYYKILLEKPWTSTSKMT 277
Query: 284 SMIGLPSDRALVEDDECLRWIKMYADNQNMFFEDFKNAYVKLVNSGARWRSL 335
SM+GLPSD ALV+DDECLRW+K YA++Q+ FFEDF NAY+KLVNSGA+W L
Sbjct: 278 SMVGLPSDHALVQDDECLRWVKRYAEDQDKFFEDFTNAYIKLVNSGAKWNML 329
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| TAIR|locus:2074914 APX2 "ascorbate peroxidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2026616 APX1 "ascorbate peroxidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2131586 APX3 "ascorbate peroxidase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2125409 APX5 "ascorbate peroxidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000029968 AN5440 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| TAIR|locus:2204735 TAPX "thylakoidal ascorbate peroxidase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2137435 SAPX "stromal ascorbate peroxidase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O04873 O04873 "Thylakoid-bound ascorbate peroxidase" [Cucurbita cv. Kurokawa Amakuri (taxid:3666)] | Back alignment and assigned GO terms |
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| CGD|CAL0000335 orf19.584 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8GY91 | APX6_ARATH | 1, ., 1, 1, ., 1, ., 1, 1 | 0.6056 | 0.8985 | 0.9148 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.11.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pg.C_LG_VI1797 | hypothetical protein (337 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | gw1.XVI.1375.1 | • | 0.899 | ||||||||
 | estExt_fgenesh4_pm.C_280146 | • | 0.899 | ||||||||
 | estExt_fgenesh4_pg.C_LG_I2142 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 335 | |||
| cd00691 | 253 | cd00691, ascorbate_peroxidase, Ascorbate peroxidas | 1e-74 | |
| cd00314 | 255 | cd00314, plant_peroxidase_like, Heme-dependent per | 2e-65 | |
| pfam00141 | 180 | pfam00141, peroxidase, Peroxidase | 5e-49 | |
| PLN02879 | 251 | PLN02879, PLN02879, L-ascorbate peroxidase | 7e-47 | |
| PLN02608 | 289 | PLN02608, PLN02608, L-ascorbate peroxidase | 9e-46 | |
| PLN02364 | 250 | PLN02364, PLN02364, L-ascorbate peroxidase 1 | 1e-37 | |
| cd00693 | 298 | cd00693, secretory_peroxidase, Horseradish peroxid | 1e-34 | |
| cd08201 | 264 | cd08201, plant_peroxidase_like_1, Uncharacterized | 6e-27 | |
| cd00692 | 328 | cd00692, ligninase, Ligninase and other manganese- | 4e-24 | |
| COG0376 | 730 | COG0376, KatG, Catalase (peroxidase I) [Inorganic | 1e-17 | |
| PLN03030 | 324 | PLN03030, PLN03030, cationic peroxidase; Provision | 9e-11 | |
| cd00649 | 409 | cd00649, catalase_peroxidase_1, N-terminal catalyt | 1e-07 | |
| TIGR00198 | 716 | TIGR00198, cat_per_HPI, catalase/peroxidase HPI | 3e-07 | |
| cd08200 | 297 | cd08200, catalase_peroxidase_2, C-terminal non-cat | 1e-06 | |
| TIGR00198 | 716 | TIGR00198, cat_per_HPI, catalase/peroxidase HPI | 4e-06 | |
| COG0376 | 730 | COG0376, KatG, Catalase (peroxidase I) [Inorganic | 5e-05 | |
| PRK15061 | 726 | PRK15061, PRK15061, catalase/hydroperoxidase HPI(I | 6e-04 | |
| PRK15061 | 726 | PRK15061, PRK15061, catalase/hydroperoxidase HPI(I | 0.002 |
| >gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases | Back alignment and domain information |
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Score = 229 bits (587), Expect = 1e-74
Identities = 95/243 (39%), Positives = 145/243 (59%), Gaps = 23/243 (9%)
Query: 107 MKEEVTKVVSKGKAASVL-RLAFHDAGTFEMDDNSGGMNGSIVY--ELERPENAGLNKPL 163
+ ++ K++ A +L RLA+HD+GT++ + +GG NG+I + EL NAGL+
Sbjct: 16 ARNDIAKLIDDKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFDPELNHGANAGLDIAR 75
Query: 164 KILEKAKGDVNAIRP-VSWADMIALGGAVAVSVCGGPNIPVPMGRLDSMEPD---PEGKL 219
K+LE K P +S+AD+ L G VA+ GGP IP GR+D+ +P+ PEG+L
Sbjct: 76 KLLEPIK----KKYPDISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRL 131
Query: 220 PQETLDASGLKQCFQRKGFSAQELVALSGAHTLGT-----KGFG-----NPIVFDNSYYK 269
P + A L+ F R GF+ QE+VALSGAHTLG G+ NP+ FDNSY+K
Sbjct: 132 PDASKGADHLRDVFYRMGFNDQEIVALSGAHTLGRCHKERSGYDGPWTKNPLKFDNSYFK 191
Query: 270 ILLEKPWQSSAGMSSMIGLPSDRALVEDDECLRWIKMYADNQNMFFEDFKNAYVKLVNSG 329
LLE+ W+ ++ LP+D+AL+ED + ++++YA +Q+ FF+D+ A+ KL G
Sbjct: 192 ELLEEDWKLPTP--GLLMLPTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELG 249
Query: 330 ARW 332
+
Sbjct: 250 VPF 252
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Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. Length = 253 |
| >gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases | Back alignment and domain information |
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| >gnl|CDD|215745 pfam00141, peroxidase, Peroxidase | Back alignment and domain information |
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| >gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase | Back alignment and domain information |
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| >gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase | Back alignment and domain information |
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| >gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 | Back alignment and domain information |
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| >gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases | Back alignment and domain information |
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| >gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins | Back alignment and domain information |
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| >gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases | Back alignment and domain information |
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| >gnl|CDD|223453 COG0376, KatG, Catalase (peroxidase I) [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional | Back alignment and domain information |
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| >gnl|CDD|173824 cd00649, catalase_peroxidase_1, N-terminal catalytic domain of catalase-peroxidases | Back alignment and domain information |
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| >gnl|CDD|232870 TIGR00198, cat_per_HPI, catalase/peroxidase HPI | Back alignment and domain information |
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| >gnl|CDD|173828 cd08200, catalase_peroxidase_2, C-terminal non-catalytic domain of catalase-peroxidases | Back alignment and domain information |
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| >gnl|CDD|232870 TIGR00198, cat_per_HPI, catalase/peroxidase HPI | Back alignment and domain information |
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| >gnl|CDD|223453 COG0376, KatG, Catalase (peroxidase I) [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >gnl|CDD|237891 PRK15061, PRK15061, catalase/hydroperoxidase HPI(I); Provisional | Back alignment and domain information |
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| >gnl|CDD|237891 PRK15061, PRK15061, catalase/hydroperoxidase HPI(I); Provisional | Back alignment and domain information |
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Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 335 | |||
| PLN03030 | 324 | cationic peroxidase; Provisional | 100.0 | |
| cd00693 | 298 | secretory_peroxidase Horseradish peroxidase and re | 100.0 | |
| PLN02879 | 251 | L-ascorbate peroxidase | 100.0 | |
| PLN02608 | 289 | L-ascorbate peroxidase | 100.0 | |
| cd00691 | 253 | ascorbate_peroxidase Ascorbate peroxidases and cyt | 100.0 | |
| PLN02364 | 250 | L-ascorbate peroxidase 1 | 100.0 | |
| cd00692 | 328 | ligninase Ligninase and other manganese-dependent | 100.0 | |
| PF00141 | 230 | peroxidase: Peroxidase; InterPro: IPR002016 Peroxi | 100.0 | |
| cd00314 | 255 | plant_peroxidase_like Heme-dependent peroxidases s | 100.0 | |
| cd00649 | 409 | catalase_peroxidase_1 N-terminal catalytic domain | 100.0 | |
| TIGR00198 | 716 | cat_per_HPI catalase/peroxidase HPI. Note that the | 100.0 | |
| PRK15061 | 726 | catalase/hydroperoxidase HPI(I); Provisional | 100.0 | |
| cd08201 | 264 | plant_peroxidase_like_1 Uncharacterized family of | 100.0 | |
| cd08200 | 297 | catalase_peroxidase_2 C-terminal non-catalytic dom | 100.0 | |
| TIGR00198 | 716 | cat_per_HPI catalase/peroxidase HPI. Note that the | 100.0 | |
| PRK15061 | 726 | catalase/hydroperoxidase HPI(I); Provisional | 100.0 | |
| COG0376 | 730 | KatG Catalase (peroxidase I) [Inorganic ion transp | 100.0 | |
| COG0376 | 730 | KatG Catalase (peroxidase I) [Inorganic ion transp | 99.75 |
| >PLN03030 cationic peroxidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-65 Score=493.66 Aligned_cols=223 Identities=30% Similarity=0.407 Sum_probs=205.4
Q ss_pred ccccCCCChhHHHHHHHHHHHHHhc--CchHHHHHHHhhhcccccccCCCCCCCCcccc-----cccCcccCCchhHHHH
Q 019824 93 LGAKAESGMSDYLLMKEEVTKVVSK--GKAASVLRLAFHDAGTFEMDDNSGGMNGSIVY-----ELERPENAGLNKPLKI 165 (335)
Q Consensus 93 l~~~~~~~~~~~~iVr~~V~~~~~~--~~aa~lLRL~FHDc~s~~~~~~~gG~dGSi~~-----E~~~p~N~gL~~~~~~ 165 (335)
..+|.++||.+|+||+++|++.+.+ +++|++|||+||||+ ++||||||++ |+++++|.+| +||++
T Consensus 27 ~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCf-------v~GCDaSvLl~~~~~Ek~a~~N~~l-~Gf~~ 98 (324)
T PLN03030 27 VGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCF-------VRGCDASILIDGSNTEKTALPNLLL-RGYDV 98 (324)
T ss_pred cchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhhe-------ecCCceEEeeCCCcccccCCCCcCc-chHHH
Confidence 3567899999999999999999986 799999999999997 6899999875 7889999988 69999
Q ss_pred HHHHHhhhcccCC--CChhhHHhhhchhhhhcCCCCCCCCCCCCCCCCCC--CCCCCCCCcccchhHHHHHHHhcCCChh
Q 019824 166 LEKAKGDVNAIRP--VSWADMIALGGAVAVSVCGGPNIPVPMGRLDSMEP--DPEGKLPQETLDASGLKQCFQRKGFSAQ 241 (335)
Q Consensus 166 I~~iK~~le~~cp--VScADiialAar~AV~~~GGP~i~v~~GR~D~~~s--~~~~~LP~p~~~~~~l~~~F~~~GLs~~ 241 (335)
|+.||+++|+.|| |||||||++||||||+++|||.|+|++||+|+.++ ....+||.|+.++++|++.|+++||+.+
T Consensus 99 i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~ 178 (324)
T PLN03030 99 IDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGLNTQ 178 (324)
T ss_pred HHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHcCCCHH
Confidence 9999999999999 99999999999999999999999999999999875 3345899999999999999999999999
Q ss_pred hHHHHhcccccCCCC-----------------------------------------------CCCCcccchHHHHHHhhC
Q 019824 242 ELVALSGAHTLGTKG-----------------------------------------------FGNPIVFDNSYYKILLEK 274 (335)
Q Consensus 242 EmVALsGaHTiG~~~-----------------------------------------------~~tP~~FDN~Yyk~Ll~~ 274 (335)
|||+|+||||||++| ..+|.+|||+||+||+++
T Consensus 179 DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll~~ 258 (324)
T PLN03030 179 DLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNLKNG 258 (324)
T ss_pred HheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHHHhc
Confidence 999999999999853 025679999999999998
Q ss_pred CCccCCCCCCccccccccccccChhHHHHHHHHhhCH----HHHHHHHHHHHHHHHhCCCCCC
Q 019824 275 PWQSSAGMSSMIGLPSDRALVEDDECLRWIKMYADNQ----NMFFEDFKNAYVKLVNSGARWR 333 (335)
Q Consensus 275 ~w~~~~G~~~~~lL~SD~aL~~D~~t~~~V~~yA~d~----~~F~~dFa~Am~KM~~lgv~~~ 333 (335)
+ | +|+|||+|+.|++|+++|++||.|+ ++|+++|++||+||+++||++-
T Consensus 259 r-----G-----lL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG 311 (324)
T PLN03030 259 R-----G-----ILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTG 311 (324)
T ss_pred C-----C-----CcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCC
Confidence 6 5 6999999999999999999999875 5999999999999999999975
|
|
| >cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases | Back alignment and domain information |
|---|
| >PLN02879 L-ascorbate peroxidase | Back alignment and domain information |
|---|
| >PLN02608 L-ascorbate peroxidase | Back alignment and domain information |
|---|
| >cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases | Back alignment and domain information |
|---|
| >PLN02364 L-ascorbate peroxidase 1 | Back alignment and domain information |
|---|
| >cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases | Back alignment and domain information |
|---|
| >PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions | Back alignment and domain information |
|---|
| >cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases | Back alignment and domain information |
|---|
| >cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases | Back alignment and domain information |
|---|
| >TIGR00198 cat_per_HPI catalase/peroxidase HPI | Back alignment and domain information |
|---|
| >PRK15061 catalase/hydroperoxidase HPI(I); Provisional | Back alignment and domain information |
|---|
| >cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins | Back alignment and domain information |
|---|
| >cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases | Back alignment and domain information |
|---|
| >TIGR00198 cat_per_HPI catalase/peroxidase HPI | Back alignment and domain information |
|---|
| >PRK15061 catalase/hydroperoxidase HPI(I); Provisional | Back alignment and domain information |
|---|
| >COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 335 | ||||
| 1apx_A | 249 | Crystal Structure Of Recombinant Ascorbate Peroxida | 7e-34 | ||
| 2vcf_X | 264 | Structure Of Isoniazid (Inh) Bound To Cytosolic Soy | 4e-33 | ||
| 2cl4_X | 261 | Ascorbate Peroxidase R172a Mutant Length = 261 | 4e-33 | ||
| 1oaf_A | 261 | Ascobate Peroxidase From Soybean Cytosol In Complex | 5e-33 | ||
| 2xif_A | 249 | The Structure Of Ascorbate Peroxidase Compound Ii L | 5e-33 | ||
| 2ggn_X | 261 | Conformational Mobility In The Active Site Of A Hem | 9e-33 | ||
| 2y6b_A | 249 | Ascorbate Peroxidase R38k Mutant Length = 249 | 2e-32 | ||
| 2y6a_A | 249 | Ascorbate Peroxidase R38a Mutant Length = 249 | 4e-32 | ||
| 3zcy_A | 249 | Ascorbate Peroxidase W41a-h42y Mutant Length = 249 | 5e-32 | ||
| 2vcs_A | 261 | Structure Of Isoniazid (Inh) Bound To Cytosolic Soy | 7e-32 | ||
| 1stq_A | 294 | Cyrstal Structure Of Cytochrome C Peroxidase Mutant | 1e-31 | ||
| 3zch_A | 261 | Ascorbate Peroxidase W41a-h42m Mutant Length = 261 | 2e-31 | ||
| 1jci_A | 294 | Stabilization Of The Engineered Cation-Binding Loop | 2e-31 | ||
| 3zcg_A | 261 | Ascorbate Peroxidase W41a-h42c Mutant Length = 261 | 2e-31 | ||
| 1sog_A | 294 | Cyrstal Structure Of Cytochrome C Peroxidase Mutant | 7e-31 | ||
| 1jdr_A | 294 | Crystal Structure Of A Proximal Domain Potassium Bi | 1e-30 | ||
| 1krj_A | 294 | Engineering Calcium-Binding Site Into Cytochrome C | 1e-30 | ||
| 3e2n_A | 287 | Engineering Ascorbate Peroxidase Activity Into Cyto | 3e-29 | ||
| 4ccp_A | 296 | X-Ray Structures Of Recombinant Yeast Cytochrome C | 6e-29 | ||
| 2x07_A | 293 | Cytochrome C Peroxidase: Engineered Ascorbate Bindi | 7e-29 | ||
| 4a78_A | 296 | Cytochrome C Peroxidase M119w In Complex With Guiac | 9e-29 | ||
| 1cck_A | 291 | Altering Substrate Specificity Of Cytochrome C Pero | 9e-29 | ||
| 2cep_A | 296 | Role Of Met-230 In Intramolecular Electron Transfer | 1e-28 | ||
| 1kok_A | 294 | Crystal Structure Of Mesopone Cytochrome C Peroxida | 1e-28 | ||
| 2xj5_A | 294 | The Structure Of Cytochrome C Peroxidase Compound I | 1e-28 | ||
| 1dcc_A | 296 | 2.2 Angstrom Structure Of Oxyperoxidase: A Model Fo | 1e-28 | ||
| 4a71_A | 296 | Cytochrome C Peroxidase In Complex With Phenol Leng | 1e-28 | ||
| 3r98_A | 293 | Joint Neutron And X-Ray Structure Of Cytochrome C P | 1e-28 | ||
| 1ebe_A | 294 | Laue Diffraction Study On The Structure Of Cytochro | 1e-28 | ||
| 2xil_A | 294 | The Structure Of Cytochrome C Peroxidase Compound I | 1e-28 | ||
| 2v23_A | 296 | Structure Of Cytochrome C Peroxidase Mutant N184r Y | 1e-28 | ||
| 2v2e_A | 294 | Structure Of Isoniazid (Inh) Bound To Cytochrome C | 1e-28 | ||
| 1kxn_A | 289 | Crystal Structure Of Cytochrome C Peroxidase With A | 1e-28 | ||
| 3m23_A | 291 | Crystallographic And Single Crystal Spectral Analys | 1e-28 | ||
| 1kxm_A | 290 | Crystal Structure Of Cytochrome C Peroxidase With A | 2e-28 | ||
| 1a2g_A | 291 | Probing The Strength And Character Of An Asp-His-X | 2e-28 | ||
| 3exb_A | 295 | Crystal Structure Of Cytochrome C Peroxidase With A | 2e-28 | ||
| 1a2f_A | 291 | Probing The Strength And Character Of An Asp-His-X | 2e-28 | ||
| 2ia8_A | 291 | Kinetic And Crystallographic Studies Of A Redesigne | 2e-28 | ||
| 4a7m_A | 296 | Cytochrome C Peroxidase S81w Mutant Length = 296 | 2e-28 | ||
| 1bva_A | 294 | Manganese Binding Mutant In Cytochrome C Peroxidase | 2e-28 | ||
| 1cca_A | 297 | The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con | 2e-28 | ||
| 1cyf_A | 296 | Identifying The Physiological Electron Transfer Sit | 2e-28 | ||
| 1beq_A | 291 | Interaction Between Proximal And Distals Regions Of | 2e-28 | ||
| 2pcb_A | 296 | Crystal Structure Of A Complex Between Electron Tra | 2e-28 | ||
| 2gb8_A | 294 | Solution Structure Of The Complex Between Yeast Iso | 3e-28 | ||
| 3ccx_A | 294 | Altering Substrate Specificity At The Heme Edge Of | 3e-28 | ||
| 1bek_A | 291 | Effect Of Unnatural Heme Substitution On Kinetics O | 3e-28 | ||
| 1bep_A | 291 | Effect Of Unnatural Heme Substitution On Kinetics O | 3e-28 | ||
| 1cpg_A | 296 | A Cation Binding Motif Stabilizes The Compound I Ra | 3e-28 | ||
| 4ccx_A | 294 | Altering Substrate Specificity At The Heme Edge Of | 3e-28 | ||
| 1s6v_A | 294 | Structure Of A Cytochrome C Peroxidase-Cytochrome C | 4e-28 | ||
| 1bem_A | 291 | Interaction Between Proximal And Distals Regions Of | 4e-28 | ||
| 1cpd_A | 296 | A Cation Binding Motif Stabilizes The Compound I Ra | 4e-28 | ||
| 2aqd_A | 294 | Cytochrome C Peroxidase (Ccp) In Complex With 2,5- | 5e-28 | ||
| 2rbu_X | 292 | Cytochrome C Peroxidase In Complex With Cyclopentan | 5e-28 | ||
| 1bej_A | 291 | Interaction Between Proximal And Distals Regions Of | 5e-28 | ||
| 2anz_A | 294 | Cytochrome C Peroxidase In Complex With 2,6-Diamino | 6e-28 | ||
| 6ccp_A | 296 | Effect Of Arginine-48 Replacement On The Reaction B | 6e-28 | ||
| 1mk8_A | 294 | Crystal Structure Of A Mutant Cytochrome C Peroxida | 7e-28 | ||
| 1ccb_A | 297 | The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con | 7e-28 | ||
| 2ccp_A | 296 | X-Ray Structures Of Recombinant Yeast Cytochrome C | 8e-28 | ||
| 3e2o_A | 294 | Crystal Structure Of Cytochrome C Peroxidase, N184r | 1e-27 | ||
| 1ccl_A | 291 | Probing The Strength And Character Of An Asp-His-X | 1e-27 | ||
| 1cmu_A | 294 | The Role Of Aspartate-235 In The Binding Of Cations | 2e-27 | ||
| 1iyn_A | 295 | Crystal Structure Of Chloroplastic Ascorbate Peroxi | 2e-27 | ||
| 1cci_A | 294 | How Flexible Are Proteins? Trapping Of A Flexible L | 2e-27 | ||
| 1ccc_A | 297 | The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con | 2e-27 | ||
| 1dj1_A | 291 | Crystal Structure Of R48a Mutant Of Cytochrome C Pe | 2e-27 | ||
| 7ccp_A | 296 | Effect Of Arginine-48 Replacement On The Reaction B | 2e-27 | ||
| 5ccp_A | 296 | Histidine 52 Is A Critical Residue For Rapid Format | 5e-27 | ||
| 1cce_A | 291 | Construction Of A Bis-Aquo Heme Enzyme And Replacem | 5e-27 | ||
| 1ds4_A | 292 | Cytochrome C Peroxidase H175g Mutant, Imidazole Com | 6e-27 | ||
| 1dse_A | 292 | Cytochrome C Peroxidase H175g Mutant, Imidazole Com | 1e-26 | ||
| 3riw_A | 271 | The Crystal Structure Of Leishmania Major Peroxidas | 3e-26 | ||
| 4ged_A | 268 | Crystal Structure Of The Leishmania Major Peroxidas | 3e-26 | ||
| 3riv_A | 271 | The Crystal Structure Of Leishmania Major Peroxidas | 3e-26 | ||
| 4a5g_A | 308 | Raphanus Sativus Anionic Peroxidase. Length = 308 | 5e-14 | ||
| 1sch_A | 294 | Peanut Peroxidase Length = 294 | 1e-13 | ||
| 3rrw_A | 268 | Crystal Structure Of The Tl29 Protein From Arabidop | 2e-13 | ||
| 1fhf_A | 304 | The Structure Of Soybean Peroxidase Length = 304 | 4e-12 | ||
| 1pa2_A | 306 | Arabidopsis Thaliana Peroxidase A2 Length = 306 | 6e-12 | ||
| 1gwo_A | 309 | Recombinant Horseradish Peroxidase C1a Ala170gln Le | 2e-11 | ||
| 1w4w_A | 323 | Ferric Horseradish Peroxidase C1a In Complex With F | 5e-11 | ||
| 3atj_A | 309 | Heme Ligand Mutant Of Recombinant Horseradish Perox | 6e-11 | ||
| 6atj_A | 308 | Recombinant Horseradish Peroxidase C Complex With F | 6e-11 | ||
| 1atj_A | 306 | Recombinant Horseradish Peroxidase C1a Length = 306 | 6e-11 | ||
| 2atj_A | 308 | Recombinant Horseradish Peroxidase Complex With Ben | 6e-11 | ||
| 1gwu_A | 309 | Recombinant Horseradish Peroxidase C1a Ala140gly Le | 6e-11 | ||
| 1gx2_A | 309 | Recombinant Horseradish Peroxidase Phe209ser Comple | 6e-11 | ||
| 3fmu_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 7e-11 | ||
| 2w23_A | 316 | Structure Of Mutant W169y Of Pleurotus Eryngii Vers | 1e-10 | ||
| 4fcs_A | 315 | The Crystal Structures Of Several Mutants Of Pleuro | 1e-10 | ||
| 2vka_A | 317 | Site-directed Mutagenesis Of The Catalytic Tryptoph | 2e-10 | ||
| 1gw2_A | 308 | Recombinant Horseradish Peroxidase C1a Thr171ser In | 2e-10 | ||
| 3fm1_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 2e-10 | ||
| 3fm6_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 2e-10 | ||
| 3fkg_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 2e-10 | ||
| 2boq_A | 331 | Crystal Structure Of Versatile Peroxidase Length = | 2e-10 | ||
| 4fef_A | 315 | The Crystal Structures Of Several Mutants Of Pleuro | 2e-10 | ||
| 3fjw_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 2e-10 | ||
| 2ylj_A | 306 | Horse Radish Peroxidase, Mutant S167y Length = 306 | 2e-10 | ||
| 3fm4_A | 331 | Crystal Structure Analysis Of Fungal Versatile Pero | 2e-10 | ||
| 4g05_A | 317 | The Crystal Structures Of Several Mutants Of Pleuro | 4e-10 | ||
| 4fdq_A | 315 | The Crystal Structures Of Several Mutants Of Pleuro | 4e-10 | ||
| 4fcn_A | 319 | The Crystal Structures Of Several Mutants Of Pleuro | 5e-10 | ||
| 4atj_A | 309 | Distal Heme Pocket Mutant (H42e) Of Recombinant Hor | 6e-10 | ||
| 1qgj_A | 300 | Arabidopsis Thaliana Peroxidase N Length = 300 | 9e-10 | ||
| 1kzm_A | 308 | Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan | 4e-09 | ||
| 3hdl_A | 304 | Crystal Structure Of Highly Glycosylated Peroxidase | 3e-08 | ||
| 1bgp_A | 309 | Crystal Structure Of Barley Grain Peroxidase 1 Leng | 5e-07 | ||
| 2dv1_A | 748 | Crystal Structure Of D141e Mutant Of Bpkatg Length | 1e-06 | ||
| 1mwv_A | 714 | Crystal Structure Of Catalase-peroxidase Katg Of Bu | 3e-06 | ||
| 1x7u_A | 748 | Crystal Structure Of The S324t Of Catalase-Peroxida | 4e-06 | ||
| 2fxg_A | 748 | Crystal Structure Of Katg At Ph 4.5 Length = 748 | 4e-06 | ||
| 3n3q_A | 748 | Crystal Structure Of The S324t Variant Of Burkholde | 4e-06 | ||
| 2dv2_A | 748 | Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8 | 4e-06 | ||
| 3q3u_A | 338 | Trametes Cervina Lignin Peroxidase Length = 338 | 4e-06 | ||
| 3n3s_A | 748 | Crystal Structure Of The E198a Variant Of Burkholde | 5e-06 | ||
| 1ly8_A | 343 | The Crystal Structure Of A Mutant Enzyme Of Coprinu | 7e-06 | ||
| 2fxj_A | 748 | Crystal Structure Of Katg At Ph 8.5 Length = 748 | 1e-05 | ||
| 3n3r_A | 748 | Crystal Structure Of The E198a Variant Of Catalase- | 1e-05 | ||
| 1b80_A | 351 | Rec. Lignin Peroxidase H8 Oxidatively Processed Len | 1e-04 | ||
| 1lga_A | 343 | Crystallographic Refinement Of Lignin Peroxidase At | 1e-04 | ||
| 1mn2_A | 357 | Manganese Peroxidase Substrate Binding Site Mutant | 1e-04 | ||
| 1mn1_A | 357 | Manganese Peroxidase Substrate Binding Site Mutant | 1e-04 | ||
| 1yyd_A | 357 | High Resolution Crystal Structure Of Manganese Pero | 1e-04 | ||
| 1ck6_A | 344 | Binding Mode Of Salicylhydroxamic Acid To Arthromyc | 1e-04 | ||
| 1b85_A | 351 | Lignin Peroxidase Length = 351 | 2e-04 | ||
| 1ub2_A | 720 | Crystal Structure Of Catalase-Peroxidase From Synec | 2e-04 | ||
| 1b82_A | 351 | Pristine Recomb. Lignin Peroxidase H8 Length = 351 | 2e-04 | ||
| 1qpa_A | 345 | Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65) Length | 2e-04 | ||
| 1lyk_A | 343 | The Impact Of The Physical And Chemical Enviroment | 2e-04 | ||
| 1ly9_A | 343 | The Impact Of The Physical And Chemical Environment | 2e-04 |
| >pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 | Back alignment and structure |
|
| >pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 | Back alignment and structure |
| >pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 | Back alignment and structure |
| >pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 | Back alignment and structure |
| >pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 | Back alignment and structure |
| >pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 | Back alignment and structure |
| >pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 | Back alignment and structure |
| >pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 | Back alignment and structure |
| >pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 | Back alignment and structure |
| >pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 | Back alignment and structure |
| >pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 | Back alignment and structure |
| >pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 | Back alignment and structure |
| >pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 | Back alignment and structure |
| >pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 | Back alignment and structure |
| >pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 | Back alignment and structure |
| >pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 | Back alignment and structure |
| >pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 | Back alignment and structure |
| >pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 | Back alignment and structure |
| >pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site Length = 293 | Back alignment and structure |
| >pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol Length = 296 | Back alignment and structure |
| >pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase Towards A Small Molecular Substrate Peroxidase By Substituting Tyrosine For Phe 202 Length = 291 | Back alignment and structure |
| >pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer Between The Oxyferryl Heme And Trp 191 In Cytochrome C Peroxidase Compound Ii Length = 296 | Back alignment and structure |
| >pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (Mpccp) Length = 294 | Back alignment and structure |
| >pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii Length = 294 | Back alignment and structure |
| >pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The Enzyme:peroxide Complex Length = 296 | Back alignment and structure |
| >pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol Length = 296 | Back alignment and structure |
| >pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C Peroxidase Length = 293 | Back alignment and structure |
| >pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C Peroxidase Compound I Length = 294 | Back alignment and structure |
| >pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I Length = 294 | Back alignment and structure |
| >pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a Length = 296 | Back alignment and structure |
| >pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C Peroxidase Mutant N184r Y36a Length = 294 | Back alignment and structure |
| >pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 | Back alignment and structure |
| >pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of The Peroxidase Ferryl Intermediate Length = 291 | Back alignment and structure |
| >pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 | Back alignment and structure |
| >pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 | Back alignment and structure |
| >pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 | Back alignment and structure |
| >pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 | Back alignment and structure |
| >pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned Manganese-Binding Site In Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant Length = 296 | Back alignment and structure |
| >pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 | Back alignment and structure |
| >pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of Cytochrome C Peroxidase By Structure-Based Engineering Length = 296 | Back alignment and structure |
| >pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase And Cytochrome C Length = 296 | Back alignment and structure |
| >pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1- Cytochrome C And Yeast Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 | Back alignment and structure |
| >pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link Length = 294 | Back alignment and structure |
| >pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 | Back alignment and structure |
| >pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 | Back alignment and structure |
| >pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 | Back alignment and structure |
| >pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 | Back alignment and structure |
| >pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 | Back alignment and structure |
| >pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase Showing A Novel Trp-Tyr Covalent Cross-Link Length = 294 | Back alignment and structure |
| >pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 | Back alignment and structure |
| >pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 | Back alignment and structure |
| >pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant Length = 294 | Back alignment and structure |
| >pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 | Back alignment and structure |
| >pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An Artificial Cavity At The Radical Site Of Cytochrome C Peroxidase Length = 294 | Back alignment and structure |
| >pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 | Back alignment and structure |
| >pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop Length = 294 | Back alignment and structure |
| >pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 | Back alignment and structure |
| >pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C Peroxidase Length = 291 | Back alignment and structure |
| >pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 | Back alignment and structure |
| >pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of Cytochrome C Peroxidase Compound I Length = 296 | Back alignment and structure |
| >pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement With Exogenous Ligand Length = 291 | Back alignment and structure |
| >pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, Ph 6, 100k Length = 292 | Back alignment and structure |
| >pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, With Phosphate Bound, Ph 6, 100k Length = 292 | Back alignment and structure |
| >pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 | Back alignment and structure |
| >pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 | Back alignment and structure |
| >pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 | Back alignment and structure |
| >pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 | Back alignment and structure |
| >pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 | Back alignment and structure |
| >pdb|3RRW|A Chain A, Crystal Structure Of The Tl29 Protein From Arabidopsis Thaliana Length = 268 | Back alignment and structure |
| >pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 | Back alignment and structure |
| >pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 | Back alignment and structure |
| >pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 | Back alignment and structure |
| >pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 | Back alignment and structure |
| >pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 | Back alignment and structure |
| >pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 | Back alignment and structure |
| >pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 | Back alignment and structure |
| >pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 | Back alignment and structure |
| >pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 | Back alignment and structure |
| >pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 | Back alignment and structure |
| >pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|2W23|A Chain A, Structure Of Mutant W169y Of Pleurotus Eryngii Versatile Peroxidase (Vp) Length = 316 | Back alignment and structure |
| >pdb|4FCS|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 315 | Back alignment and structure |
| >pdb|2VKA|A Chain A, Site-directed Mutagenesis Of The Catalytic Tryptophan Environment In Pleurotus Eryngii Versatile Peroxidase Length = 317 | Back alignment and structure |
| >pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 | Back alignment and structure |
| >pdb|3FM1|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|3FKG|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|2BOQ|A Chain A, Crystal Structure Of Versatile Peroxidase Length = 331 | Back alignment and structure |
| >pdb|4FEF|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 315 | Back alignment and structure |
| >pdb|3FJW|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 | Back alignment and structure |
| >pdb|3FM4|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 | Back alignment and structure |
| >pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 317 | Back alignment and structure |
| >pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 315 | Back alignment and structure |
| >pdb|4FCN|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 319 | Back alignment and structure |
| >pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 | Back alignment and structure |
| >pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 | Back alignment and structure |
| >pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 | Back alignment and structure |
| >pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 | Back alignment and structure |
| >pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 | Back alignment and structure |
| >pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg Length = 748 | Back alignment and structure |
| >pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of Burkholderia Pseudomallei Length = 714 | Back alignment and structure |
| >pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg Length = 748 | Back alignment and structure |
| >pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5 Length = 748 | Back alignment and structure |
| >pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound Length = 748 | Back alignment and structure |
| >pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0 Length = 748 | Back alignment and structure |
| >pdb|3Q3U|A Chain A, Trametes Cervina Lignin Peroxidase Length = 338 | Back alignment and structure |
| >pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia Pseudomallei Catalase-Peroxidase Katg With Inh Length = 748 | Back alignment and structure |
| >pdb|1LY8|A Chain A, The Crystal Structure Of A Mutant Enzyme Of Coprinus Cinereus Peroxidase Provides An Understanding Of Its Increased Thermostability And Insight Into Modelling Of Protein Structures Length = 343 | Back alignment and structure |
| >pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5 Length = 748 | Back alignment and structure |
| >pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of Catalase-Peroxidase Katg Of Burkholderia Pseudomallei Length = 748 | Back alignment and structure |
| >pdb|1B80|A Chain A, Rec. Lignin Peroxidase H8 Oxidatively Processed Length = 351 | Back alignment and structure |
| >pdb|1LGA|A Chain A, Crystallographic Refinement Of Lignin Peroxidase At 2 Angstroms Length = 343 | Back alignment and structure |
| >pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q, D179n Length = 357 | Back alignment and structure |
| >pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n Length = 357 | Back alignment and structure |
| >pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase Length = 357 | Back alignment and structure |
| >pdb|1CK6|A Chain A, Binding Mode Of Salicylhydroxamic Acid To Arthromyces Ramosus Peroxidase Length = 344 | Back alignment and structure |
| >pdb|1B85|A Chain A, Lignin Peroxidase Length = 351 | Back alignment and structure |
| >pdb|1UB2|A Chain A, Crystal Structure Of Catalase-Peroxidase From Synechococcus Pcc 7942 Length = 720 | Back alignment and structure |
| >pdb|1B82|A Chain A, Pristine Recomb. Lignin Peroxidase H8 Length = 351 | Back alignment and structure |
| >pdb|1QPA|A Chain A, Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65) Length = 345 | Back alignment and structure |
| >pdb|1LYK|A Chain A, The Impact Of The Physical And Chemical Enviroment On The Molecular Structure Of Coprinus Cinereus Peroxidase Length = 343 | Back alignment and structure |
| >pdb|1LY9|A Chain A, The Impact Of The Physical And Chemical Environment On The Molecular Structure Of Coprinus Cinereus Peroxidase Length = 343 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 | Back alignment and structure |
|---|
Score = 250 bits (640), Expect = 2e-82
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 31/267 (11%)
Query: 97 AESGMSDYLLMKEEVTKVVSKGKAAS--VLRLAFHDAGTFEMDDNSGGMNGSIVY---EL 151
+E D ++ ++ ++S+ ++RLA+H+A +++ G N + + E
Sbjct: 2 SEEPPFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKKDGSPNSASMRFKPEC 61
Query: 152 ERPENAGLNKPLKILEKAKGDVNAIRPVSWADMIALGGAVAVSVCGGPNIPVPMGRLDSM 211
N GL+ P K LE K I S+AD+ L VA+ GGP IP GR+D+
Sbjct: 62 LYAGNKGLDIPRKALETLKKKYPQI---SYADLWVLAAYVAIEYMGGPTIPFCWGRVDAK 118
Query: 212 EPD---PEGKLPQETLDASGLKQCFQRKGFSAQELVALSGAHTLG-----TKGFG----- 258
+ P+G+LP + S +++ F+R GF+ QE VAL GAHT G G+
Sbjct: 119 DGSVCGPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGPWTH 178
Query: 259 NPIVFDNSYYKILLEKPWQSS----------AGMSSMIGLPSDRALVEDDECLRWIKMYA 308
+ FDNS++ LL++ W + + ++ LPSD L+ D +++++YA
Sbjct: 179 DKNGFDNSFFTQLLDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLDPSYRKYVELYA 238
Query: 309 DNQNMFFEDFKNAYVKLVNSGARWRSL 335
+ + F +DF NA+ KL G R
Sbjct: 239 KDNDRFNKDFANAFKKLTELGTRNLHK 265
|
| >2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 | Back alignment and structure |
|---|
| >3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 | Back alignment and structure |
|---|
| >3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 | Back alignment and structure |
|---|
| >1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 | Back alignment and structure |
|---|
| >3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 | Back alignment and structure |
|---|
| >2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 | Back alignment and structure |
|---|
| >1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 | Back alignment and structure |
|---|
| >3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 | Back alignment and structure |
|---|
| >3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 | Back alignment and structure |
|---|
| >1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 | Back alignment and structure |
|---|
| >1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 | Back alignment and structure |
|---|
| >3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 | Back alignment and structure |
|---|
| >1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 | Back alignment and structure |
|---|
| >1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 | Back alignment and structure |
|---|
| >1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 | Back alignment and structure |
|---|
| >1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 | Back alignment and structure |
|---|
| >1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Length = 720 | Back alignment and structure |
|---|
| >1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Length = 720 | Back alignment and structure |
|---|
| >3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Length = 764 | Back alignment and structure |
|---|
| >3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Length = 764 | Back alignment and structure |
|---|
| >1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Length = 731 | Back alignment and structure |
|---|
| >1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Length = 731 | Back alignment and structure |
|---|
| >3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Length = 748 | Back alignment and structure |
|---|
| >3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Length = 748 | Back alignment and structure |
|---|
| >2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Length = 740 | Back alignment and structure |
|---|
| >2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Length = 740 | Back alignment and structure |
|---|
| >1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Length = 309 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 335 | |||
| 3hdl_A | 304 | Royal PALM TREE peroxidase; glycosylated, oxidored | 100.0 | |
| 1sch_A | 294 | PNP, peanut peroxidase, major cationic isozyme; ca | 100.0 | |
| 1fhf_A | 304 | SEED coat peroxidase; oxidoreductase; HET: HEM; 2. | 100.0 | |
| 1pa2_A | 306 | Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 | 100.0 | |
| 1gwu_A | 309 | Peroxidase C1A; oxidoreductase, glycoprotein, heme | 100.0 | |
| 1qgj_A | 300 | Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A | 100.0 | |
| 1bgp_A | 309 | Barley grain peroxidase; chromoprotein, oxidoreduc | 100.0 | |
| 1iyn_A | 295 | Chloroplastic ascorbate peroxidase; hydrogen perox | 100.0 | |
| 2vcn_A | 261 | Ascorbate peroxidase; INH, APX, isoniazid, oxidore | 100.0 | |
| 3e2o_A | 294 | CCP, cytochrome C peroxidase; cytochrome C peroxid | 100.0 | |
| 3riv_A | 271 | Ascorbate peroxidase; alpha helical bundle, heme p | 100.0 | |
| 3fmu_A | 331 | VersatIle peroxidase VPL2; class II (fungal) perox | 100.0 | |
| 3m5q_A | 357 | Manganese peroxidase 1; heme, Mn(II)-binding site, | 100.0 | |
| 3q3u_A | 338 | Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A | 100.0 | |
| 2e39_A | 344 | Peroxidase; heme protein, coordination geometry of | 100.0 | |
| 2cca_A | 740 | Peroxidase/catalase T; oxidoreductase, catalase-pe | 100.0 | |
| 3ut2_A | 764 | Catalase-peroxidase 2; KATG, fungal, heme enzyme, | 100.0 | |
| 1ub2_A | 720 | Catalase-peroxidase; KATG, cyanobacteria, oxidored | 100.0 | |
| 3vli_A | 737 | Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 | 100.0 | |
| 1llp_A | 343 | LIP4.15, lignin peroxidase; heme protein, glyco pr | 100.0 | |
| 1itk_A | 731 | Catalase-peroxidase; heme protein, oxidoreductase; | 100.0 | |
| 1u2k_A | 309 | Peroxidase/catalase HPI; KATG, catalase-peroxidase | 100.0 | |
| 3n3r_A | 748 | Catalase-peroxidase; E198A variant, tuberclosis, i | 100.0 | |
| 3rrw_A | 268 | Thylakoid lumenal 29 kDa protein, chloroplastic; c | 100.0 | |
| 3vli_A | 737 | Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 | 100.0 | |
| 2cca_A | 740 | Peroxidase/catalase T; oxidoreductase, catalase-pe | 100.0 | |
| 1itk_A | 731 | Catalase-peroxidase; heme protein, oxidoreductase; | 100.0 | |
| 3n3r_A | 748 | Catalase-peroxidase; E198A variant, tuberclosis, i | 100.0 | |
| 1ub2_A | 720 | Catalase-peroxidase; KATG, cyanobacteria, oxidored | 100.0 | |
| 3ut2_A | 764 | Catalase-peroxidase 2; KATG, fungal, heme enzyme, | 100.0 |
| >3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-69 Score=517.05 Aligned_cols=223 Identities=30% Similarity=0.417 Sum_probs=208.0
Q ss_pred cccCCCChhHHHHHHHHHHHHHhc--CchHHHHHHHhhhcccccccCCCCCCCCcccc--------cccCcccC-CchhH
Q 019824 94 GAKAESGMSDYLLMKEEVTKVVSK--GKAASVLRLAFHDAGTFEMDDNSGGMNGSIVY--------ELERPENA-GLNKP 162 (335)
Q Consensus 94 ~~~~~~~~~~~~iVr~~V~~~~~~--~~aa~lLRL~FHDc~s~~~~~~~gG~dGSi~~--------E~~~p~N~-gL~~~ 162 (335)
.+|..+||.+|+|||++|++++.+ +++|++||||||||+ ++||||||++ |+++++|. +| +|
T Consensus 5 ~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCf-------v~GCDgSiLld~t~~~~~Ek~~~~N~~~l-rg 76 (304)
T 3hdl_A 5 GFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCF-------VRGCDASVLLDSTANNTAEKDAIPNNPSL-RG 76 (304)
T ss_dssp TTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHT-------TTSSSSGGGCCCBTTBCCGGGSTTTTTTC-CC
T ss_pred ChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheeccc-------CCCCCeeeeecCCCCCcccccCCCcccch-HH
Confidence 578899999999999999999986 789999999999997 6999999874 89999998 67 79
Q ss_pred HHHHHHHHhhhcccCC--CChhhHHhhhchhhhhcCCCCCCCCCCCCCCCCCCCC---CCCCCCcccchhHHHHHHHhcC
Q 019824 163 LKILEKAKGDVNAIRP--VSWADMIALGGAVAVSVCGGPNIPVPMGRLDSMEPDP---EGKLPQETLDASGLKQCFQRKG 237 (335)
Q Consensus 163 ~~~I~~iK~~le~~cp--VScADiialAar~AV~~~GGP~i~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~G 237 (335)
|++||+||++||+.|| |||||||+||||+||+++|||.|+|++||+|+.++.+ .++||.|+.++++|++.|++||
T Consensus 77 f~vid~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G 156 (304)
T 3hdl_A 77 FEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKT 156 (304)
T ss_dssp HHHHHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcC
Confidence 9999999999999999 9999999999999999999999999999999998754 5689999999999999999999
Q ss_pred CChhhHHHHhcccccCCCC----------C--------------------------------------CCCcccchHHHH
Q 019824 238 FSAQELVALSGAHTLGTKG----------F--------------------------------------GNPIVFDNSYYK 269 (335)
Q Consensus 238 Ls~~EmVALsGaHTiG~~~----------~--------------------------------------~tP~~FDN~Yyk 269 (335)
|+++|||||+||||||++| | .+|.+|||+||+
T Consensus 157 l~~~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~ 236 (304)
T 3hdl_A 157 LTADEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYT 236 (304)
T ss_dssp CCHHHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHH
T ss_pred CCHHHhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHH
Confidence 9999999999999999853 1 368899999999
Q ss_pred HHhhCCCccCCCCCCccccccccccccChhHHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCC
Q 019824 270 ILLEKPWQSSAGMSSMIGLPSDRALVEDDECLRWIKMYADNQNMFFEDFKNAYVKLVNSGARWRS 334 (335)
Q Consensus 270 ~Ll~~~w~~~~G~~~~~lL~SD~aL~~D~~t~~~V~~yA~d~~~F~~dFa~Am~KM~~lgv~~~~ 334 (335)
+|+.++ | +|+|||+|+.|++|+++|++||.||++|+++|++||+||+++||++.+
T Consensus 237 nL~~~~-----g-----lL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~ 291 (304)
T 3hdl_A 237 GVQLTL-----G-----LLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGT 291 (304)
T ss_dssp HHHTTC-----C-----CSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTT
T ss_pred HHHhCc-----C-----CCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 999986 5 799999999999999999999999999999999999999999999853
|
| >1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 | Back alignment and structure |
|---|
| >1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 | Back alignment and structure |
|---|
| >1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* | Back alignment and structure |
|---|
| >1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... | Back alignment and structure |
|---|
| >1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 | Back alignment and structure |
|---|
| >1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 | Back alignment and structure |
|---|
| >1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 | Back alignment and structure |
|---|
| >2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... | Back alignment and structure |
|---|
| >3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... | Back alignment and structure |
|---|
| >3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* | Back alignment and structure |
|---|
| >3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* | Back alignment and structure |
|---|
| >3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* | Back alignment and structure |
|---|
| >3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 | Back alignment and structure |
|---|
| >2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* | Back alignment and structure |
|---|
| >2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* | Back alignment and structure |
|---|
| >3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} | Back alignment and structure |
|---|
| >1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 | Back alignment and structure |
|---|
| >3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* | Back alignment and structure |
|---|
| >1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* | Back alignment and structure |
|---|
| >1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 | Back alignment and structure |
|---|
| >1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A | Back alignment and structure |
|---|
| >3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* | Back alignment and structure |
|---|
| >3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* | Back alignment and structure |
|---|
| >2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* | Back alignment and structure |
|---|
| >1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 | Back alignment and structure |
|---|
| >3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* | Back alignment and structure |
|---|
| >1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 | Back alignment and structure |
|---|
| >3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 335 | ||||
| d2euta1 | 291 | a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B | 6e-49 | |
| d1llpa_ | 343 | a.93.1.1 (A:) Fungal peroxidase (ligninase) {White | 1e-46 | |
| d2e39a1 | 336 | a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { | 4e-46 | |
| d1oafa_ | 250 | a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci | 4e-45 | |
| d1fhfa_ | 304 | a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m | 2e-44 | |
| d1scha_ | 294 | a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy | 5e-44 | |
| d1yyda1 | 357 | a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { | 2e-43 | |
| d1gwua_ | 307 | a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor | 4e-42 | |
| d1qgja_ | 300 | a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A | 5e-41 | |
| d1pa2a_ | 306 | a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A | 7e-41 | |
| d1iyna_ | 275 | a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco | 1e-40 | |
| d1bgpa_ | 309 | a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu | 2e-39 | |
| d1u2ka_ | 292 | a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholder | 1e-31 | |
| d1ub2a2 | 294 | a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Syn | 3e-30 | |
| d1mwva2 | 308 | a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Bur | 3e-29 | |
| d1mwva1 | 406 | a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk | 1e-28 | |
| d1itka2 | 308 | a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Arc | 2e-28 | |
| d1itka1 | 406 | a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch | 9e-25 | |
| d2ccaa1 | 410 | a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco | 2e-23 | |
| d1ub2a1 | 406 | a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Syne | 8e-22 | |
| d2ccaa2 | 285 | a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Myc | 4e-19 |
| >d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: CCP-like domain: Cytochrome c peroxidase, CCP species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 163 bits (414), Expect = 6e-49
Identities = 81/253 (32%), Positives = 124/253 (49%), Gaps = 27/253 (10%)
Query: 106 LMKEEVTKVVSKGKAASVLRLAFHDAGTFEMDDNSGGMNGSIV---YELERPENAGLNKP 162
++E+ G ++RLA+H +GT++ DN+GG G E P NAGL
Sbjct: 26 KLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNG 85
Query: 163 LKILEKAKGDVNAIRPVSWADMIALGGAVAVSVCGGPNIPVPMGRLDSMEP--DPEGKLP 220
K LE + +S D+ +LGG AV GP IP GR+D+ E G+LP
Sbjct: 86 FKFLEPIHKEFP---WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLP 142
Query: 221 QETLDASGLKQCFQRKGFSAQELVALSGAHTLG-----TKGFGNPI-----VFDNSYYKI 270
DA ++ FQR + +E+VAL GAH LG G+ P VF N +Y
Sbjct: 143 DADKDAGYVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEFYLN 202
Query: 271 LLEKPWQSSAGMSSM---------IGLPSDRALVEDDECLRWIKMYADNQNMFFEDFKNA 321
LL + W+ ++ + LP+D +L++D + L +K YA++Q+ FF+DF A
Sbjct: 203 LLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKA 262
Query: 322 YVKLVNSGARWRS 334
+ KL+ +G +
Sbjct: 263 FEKLLENGITFPK 275
|
| >d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 | Back information, alignment and structure |
|---|
| >d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 | Back information, alignment and structure |
|---|
| >d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 | Back information, alignment and structure |
|---|
| >d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 | Back information, alignment and structure |
|---|
| >d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 | Back information, alignment and structure |
|---|
| >d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 | Back information, alignment and structure |
|---|
| >d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 | Back information, alignment and structure |
|---|
| >d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 | Back information, alignment and structure |
|---|
| >d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 | Back information, alignment and structure |
|---|
| >d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 | Back information, alignment and structure |
|---|
| >d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 | Back information, alignment and structure |
|---|
| >d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 292 | Back information, alignment and structure |
|---|
| >d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 294 | Back information, alignment and structure |
|---|
| >d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 308 | Back information, alignment and structure |
|---|
| >d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 | Back information, alignment and structure |
|---|
| >d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 308 | Back information, alignment and structure |
|---|
| >d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 | Back information, alignment and structure |
|---|
| >d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 | Back information, alignment and structure |
|---|
| >d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Length = 406 | Back information, alignment and structure |
|---|
| >d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 285 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 335 | |||
| d1fhfa_ | 304 | Plant peroxidase {Soybean (Glycine max) [TaxId: 38 | 100.0 | |
| d1pa2a_ | 306 | Plant peroxidase {Mouse-ear cress (Arabidopsis tha | 100.0 | |
| d1qgja_ | 300 | Plant peroxidase {Mouse-ear cress (Arabidopsis tha | 100.0 | |
| d1bgpa_ | 309 | Plant peroxidase {Barley (Hordeum vulgare), peroxi | 100.0 | |
| d1scha_ | 294 | Plant peroxidase {Peanut (Arachis hypogaea) [TaxId | 100.0 | |
| d1gwua_ | 307 | Plant peroxidase {Horseradish (Armoracia rusticana | 100.0 | |
| d1iyna_ | 275 | Ascorbate peroxidase {Common tobacco (Nicotiana ta | 100.0 | |
| d1oafa_ | 250 | Ascorbate peroxidase {Soybean (Glycine max) [TaxId | 100.0 | |
| d2euta1 | 291 | Cytochrome c peroxidase, CCP {Baker's yeast (Sacch | 100.0 | |
| d2e39a1 | 336 | Fungal peroxidase (ligninase) {Arthromyces ramosus | 100.0 | |
| d1yyda1 | 357 | Fungal peroxidase (ligninase) {Basidomycetos fungu | 100.0 | |
| d1llpa_ | 343 | Fungal peroxidase (ligninase) {White rot basidiomy | 100.0 | |
| d1mwva1 | 406 | Catalase-peroxidase KatG {Burkholderia pseudomalle | 100.0 | |
| d1itka1 | 406 | Catalase-peroxidase KatG {Archaeon Haloarcula mari | 100.0 | |
| d1mwva2 | 308 | Catalase-peroxidase KatG {Burkholderia pseudomalle | 100.0 | |
| d1u2ka_ | 292 | Catalase-peroxidase KatG {Burkholderia pseudomalle | 100.0 | |
| d2ccaa1 | 410 | Catalase-peroxidase KatG {Mycobacterium tuberculos | 100.0 | |
| d1ub2a2 | 294 | Catalase-peroxidase KatG {Synechococcus sp. pcc 79 | 100.0 | |
| d1itka2 | 308 | Catalase-peroxidase KatG {Archaeon Haloarcula mari | 100.0 | |
| d1ub2a1 | 406 | Catalase-peroxidase KatG {Synechococcus sp. pcc 79 | 100.0 | |
| d2ccaa2 | 285 | Catalase-peroxidase KatG {Mycobacterium tuberculos | 100.0 |
| >d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Heme-dependent peroxidases superfamily: Heme-dependent peroxidases family: CCP-like domain: Plant peroxidase species: Soybean (Glycine max) [TaxId: 3847]
Probab=100.00 E-value=8.4e-67 Score=499.02 Aligned_cols=224 Identities=31% Similarity=0.493 Sum_probs=208.0
Q ss_pred ccccCCCChhHHHHHHHHHHHHHhc--CchHHHHHHHhhhcccccccCCCCCCCCcccc--------cccCcccCCchhH
Q 019824 93 LGAKAESGMSDYLLMKEEVTKVVSK--GKAASVLRLAFHDAGTFEMDDNSGGMNGSIVY--------ELERPENAGLNKP 162 (335)
Q Consensus 93 l~~~~~~~~~~~~iVr~~V~~~~~~--~~aa~lLRL~FHDc~s~~~~~~~gG~dGSi~~--------E~~~p~N~gL~~~ 162 (335)
..+|.++||.+|.||+++|++.+.+ +++|++|||+||||+ ++||||||++ |+++++|.++.++
T Consensus 4 ~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCf-------v~GCDgSill~~~~~~~~E~~~~~N~~~~~g 76 (304)
T d1fhfa_ 4 PTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCF-------VQGCDGSVLLNNTDTIESEQDALPNINSIRG 76 (304)
T ss_dssp TTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHT-------TTCSSSGGGCCCCSSCCCGGGSTTTTTTCCC
T ss_pred CccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhc-------cCCCCeeEeecCCCCccccccCCcccccchh
Confidence 3578889999999999999999986 789999999999997 6899999964 8999999988789
Q ss_pred HHHHHHHHhhhcccCC--CChhhHHhhhchhhhhcCCCCCCCCCCCCCCCCCCC---CCCCCCCcccchhHHHHHHHhcC
Q 019824 163 LKILEKAKGDVNAIRP--VSWADMIALGGAVAVSVCGGPNIPVPMGRLDSMEPD---PEGKLPQETLDASGLKQCFQRKG 237 (335)
Q Consensus 163 ~~~I~~iK~~le~~cp--VScADiialAar~AV~~~GGP~i~v~~GR~D~~~s~---~~~~LP~p~~~~~~l~~~F~~~G 237 (335)
+++|+.||++||..|| |||||||+||||+||+++|||.|+|++||+|+.++. +.++||.|..++++|++.|++||
T Consensus 77 ~~~id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G 156 (304)
T d1fhfa_ 77 LDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQG 156 (304)
T ss_dssp HHHHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcC
Confidence 9999999999999999 999999999999999999999999999999999875 45689999999999999999999
Q ss_pred CChhhHHHHhcccccCCCC----------------------------------------------CCCCcccchHHHHHH
Q 019824 238 FSAQELVALSGAHTLGTKG----------------------------------------------FGNPIVFDNSYYKIL 271 (335)
Q Consensus 238 Ls~~EmVALsGaHTiG~~~----------------------------------------------~~tP~~FDN~Yyk~L 271 (335)
|+.+|||||+||||||++| ..+|.+|||+||+++
T Consensus 157 l~~~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l 236 (304)
T d1fhfa_ 157 LNTLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNL 236 (304)
T ss_dssp CCHHHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHH
T ss_pred CCHHHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHH
Confidence 9999999999999999853 036899999999999
Q ss_pred hhCCCccCCCCCCccccccccccccCh--hHHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCC
Q 019824 272 LEKPWQSSAGMSSMIGLPSDRALVEDD--ECLRWIKMYADNQNMFFEDFKNAYVKLVNSGARWR 333 (335)
Q Consensus 272 l~~~w~~~~G~~~~~lL~SD~aL~~D~--~t~~~V~~yA~d~~~F~~dFa~Am~KM~~lgv~~~ 333 (335)
++++ | +|+|||+|+.|| +|+++|++||.||++|+++|++||+||+++||++-
T Consensus 237 ~~~~-----g-----lL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg 290 (304)
T d1fhfa_ 237 LQLN-----G-----LLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTG 290 (304)
T ss_dssp HTTC-----C-----SSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCT
T ss_pred hhcC-----c-----ccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9875 5 699999999997 69999999999999999999999999999999974
|
| >d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} | Back information, alignment and structure |
|---|
| >d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} | Back information, alignment and structure |
|---|
| >d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
| >d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} | Back information, alignment and structure |
|---|
| >d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} | Back information, alignment and structure |
|---|
| >d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
| >d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} | Back information, alignment and structure |
|---|
| >d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} | Back information, alignment and structure |
|---|
| >d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} | Back information, alignment and structure |
|---|
| >d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
| >d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} | Back information, alignment and structure |
|---|
| >d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|