Citrus Sinensis ID: 019891

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330----
MQLIAMVVASPNPVRNEKILAIDLPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAEKQRAGPANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSIAQRSKSISNDPSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHYPSCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSVRHRALSDSSQSRMSMAYFGAPALQARVSAPPEMVTTNRPSLYRPFTWAEYKATAYSLSLGDNRLDLFINCKDDDHKKLLD
cccccccccccccccccccccccccEEEcccccHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHccccccccccccccccccccccEEEEEccccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccccEEEEEcccccccccccccccccccccccccEEEEEccccccEEEEccccEEEcccccccEEEEEcccHHHHHcccccccccEEEEcccccEEEEEEEcccccccEEEccccccccccccccccccHHHHHHHHHHcccccccHHHHHcccccccccccc
ccEEcccccccccccccccccccccEEEccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHcccccccccEEEccccccccHHHEEEEEEccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccEEEEEccccccccccHHccccccccccEEEEEEccccccEEEEEcccEEEEccccccEEEEEEccHHEEEccccEcEEEEEEEEEcccccEEEEEEcccccccEEcccHHHcccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHccccccc
MQLIAMVVaspnpvrnekilaidlpmidlsadrSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEkplaekqragpanpfgygcknigfngdmGEVEFLLLHTnplsiaqrsksisndpskfgsAMNNYIRAVRELACEILDLMAeglwvrdpsyfsKMIRdvendsffrinhypsccnnnttrvgfgehsdpqILTILRsndvgglqispdhgvwipvapdpaafcVNVGDVLQAMTNGRFVSVRHralsdssqsrmsmayfgapalqarvsappemvttnrpslyrpftwaeYKATAYSLslgdnrldlfinckdddhkklld
MQLIAMVVaspnpvrneKILAIDLPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAEKQRAGPANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSIAQrsksisndpskFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHYPSCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSVRHRALSDSSQSRMSMAYFGAPALQARVSAPPEMVTTNRPSLYRPFTWAEYKATAYSLSLGDNRLDLFINCKDDDHKKLLD
MQLIAMVVASPNPVRNEKILAIDLPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAEKQRAGPANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSIAQRSKSISNDPSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHYPSCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSVRHRALSDSSQSRMSMAYFGAPALQARVSAPPEMVTTNRPSLYRPFTWAEYKATAYSLSLGDNRLDLFINCKDDDHKKLLD
*****MVVA***PVRNEKILAIDLPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFE***********ANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSI****************AMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHYPSCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSVRH***************F*******************RPSLYRPFTWAEYKATAYSLSLGDNRLDLFINCK*********
MQLIAM*****************LPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAE***********YG*KNIGFNGDMGEVEFLLLHTNPLSIAQRSKSISNDPSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHYPSCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSVRHRALSDSSQSRMSMAYFGAPALQARVSAPPEMVTTNRPSLYRPFTWAEYKATAYSLSLGDNRLDLFIN***********
MQLIAMVVASPNPVRNEKILAIDLPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAEKQRAGPANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSIAQRSKSISNDPSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHYPSCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSVRHRALSDSSQSRMSMAYFGAPALQARVSAPPEMVTTNRPSLYRPFTWAEYKATAYSLSLGDNRLDLFINCKDDDHKKLLD
MQLIAMVVASPNPVRNEKILAIDLPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAEKQRAGPANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSIAQRSKSISNDPSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHYPSCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSVRHRALSDSSQSRMSMAYFGAPALQARVSAPPEMVTTNRPSLYRPFTWAEYKATAYSLSLGDNRLDLFINCKDDD******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQLIAMVVASPNPVRNEKILAIDLPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAEKQRAGPANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSIAQRSKSISNDPSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHYPSCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSVRHRALSDSSQSRMSMAYFGAPALQARVSAPPEMVTTNRPSLYRPFTWAEYKATAYSLSLGDNRLDLFINCKDDDHKKLLD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query334 2.2.26 [Sep-21-2011]
Q9XHM5345 Gibberellin 2-beta-dioxyg N/A no 0.967 0.936 0.573 1e-113
Q9XG83332 Gibberellin 2-beta-dioxyg N/A no 0.898 0.903 0.486 5e-83
Q9SQ80327 Gibberellin 2-beta-dioxyg N/A no 0.865 0.883 0.496 5e-82
Q9XFR9341 Gibberellin 2-beta-dioxyg no no 0.922 0.903 0.456 5e-78
O64692335 Gibberellin 2-beta-dioxyg no no 0.886 0.883 0.43 4e-71
Q8LEA2329 Gibberellin 2-beta-dioxyg no no 0.883 0.896 0.432 7e-70
Q39111378 Gibberellin 20 oxidase 2 no no 0.889 0.785 0.353 3e-41
O04705361 Gibberellin 20 oxidase 1- N/A no 0.874 0.808 0.337 4e-39
O04707365 Gibberellin 20 oxidase 1- N/A no 0.850 0.778 0.336 7e-39
Q39110377 Gibberellin 20 oxidase 1 no no 0.835 0.740 0.330 1e-38
>sp|Q9XHM5|G2OX2_PEA Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1 Back     alignment and function desciption
 Score =  407 bits (1046), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/338 (57%), Positives = 249/338 (73%), Gaps = 15/338 (4%)

Query: 6   MVVASPNP-VRNEKILAIDLPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAE 64
           MVV SP   +R +K  A+ +P IDLS +RS++ +L+V+ACEEYGFFKV+NH VP+ VI+ 
Sbjct: 1   MVVPSPTSMIRTKKTKAVGIPTIDLSLERSQLSELVVKACEEYGFFKVVNHSVPKEVISR 60

Query: 65  MEQESVNFFEKPLAEKQRAGPANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSIAQRSKSI 124
           +++E + FF K  +EK++AG + PFGYGCKNIG NGD GE+E+LLLH+NP+SI++RSK+I
Sbjct: 61  LDEEGIEFFSKNSSEKRQAGTSTPFGYGCKNIGPNGDKGELEYLLLHSNPISISERSKTI 120

Query: 125 SND-PSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHY 183
           + D P KF   +N+YI+AV++L CEIL+L AEGLWV D S  SK+I+D  +DS  RINHY
Sbjct: 121 AKDHPIKFSCIVNDYIKAVKDLTCEILELAAEGLWVPDKSSLSKIIKDEHSDSLLRINHY 180

Query: 184 P-------------SCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAP 230
           P                N+N   +GFGEHSDPQILTILRSN+VGGLQIS  HG+WIPV P
Sbjct: 181 PPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQILTILRSNNVGGLQISTHHGLWIPVPP 240

Query: 231 DPAAFCVNVGDVLQAMTNGRFVSVRHRALSDSSQSRMSMAYFGAPALQARVSAPPEMVTT 290
           DP+ F V VGD LQ +TNGRFVSVRHR L+++++ RMSM YF AP L   +S   +MVT 
Sbjct: 241 DPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYFAAPPLNWLISPLSKMVTA 300

Query: 291 NRPSLYRPFTWAEYKATAYSLSLGDNRLDLFINCKDDD 328
           + P LYRPFTWA+YK  AY+L LGD RLD F   K +D
Sbjct: 301 HSPCLYRPFTWAQYKQAAYALRLGDTRLDQFKVQKQED 338
Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins, leading to the homeostatic regulation of their endogenous level. Catabolism of gibberellins (GAs) plays a central role in plant development. Converts GA9/GA20 to GA51/GA29 and GA4/GA1 to GA34/GA8.
Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 3
>sp|Q9XG83|G2OX_PHACN Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SQ80|G2OX1_PEA Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1 Back     alignment and function description
>sp|Q9XFR9|G2OX2_ARATH Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1 Back     alignment and function description
>sp|O64692|G2OX3_ARATH Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1 Back     alignment and function description
>sp|Q8LEA2|G2OX1_ARATH Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2 Back     alignment and function description
>sp|Q39111|GAOX2_ARATH Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1 Back     alignment and function description
>sp|O04705|GAO1D_WHEAT Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1 Back     alignment and function description
>sp|O04707|GAO1A_WHEAT Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1 Back     alignment and function description
>sp|Q39110|GAOX1_ARATH Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query334
37544101335 gibberellin 2-oxidase [Populus alba x Po 0.940 0.937 0.698 1e-131
255556484346 gibberellin 2-oxidase, putative [Ricinus 0.946 0.913 0.689 1e-130
380448150339 gibberellin 2-beta-dioxygenase 4 [Vitis 0.976 0.961 0.646 1e-128
225432055339 PREDICTED: gibberellin 2-beta-dioxygenas 0.976 0.961 0.643 1e-128
340796367320 GA2ox6 [Gossypium hirsutum] 0.952 0.993 0.687 1e-127
340796365325 GA2ox5 [Gossypium hirsutum] 0.952 0.978 0.667 1e-124
297744020334 unnamed protein product [Vitis vinifera] 0.946 0.946 0.631 1e-121
225437645333 PREDICTED: gibberellin 2-beta-dioxygenas 0.946 0.948 0.631 1e-121
224101511322 gibberellin 2-oxidase [Populus trichocar 0.904 0.937 0.654 1e-120
224064641322 gibberellin 2-oxidase [Populus trichocar 0.946 0.981 0.635 1e-119
>gi|37544101|gb|AAQ93035.1| gibberellin 2-oxidase [Populus alba x Populus tremuloides] Back     alignment and taxonomy information
 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/328 (69%), Positives = 268/328 (81%), Gaps = 14/328 (4%)

Query: 6   MVVASPNPVRNEKILAIDLPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEM 65
           MVVASP  +  EK+LAI+LP+IDLS +RS V  LIV+ACEEYGFFKV NHGVP  +IA M
Sbjct: 1   MVVASPTQIHGEKLLAIELPVIDLSGERSMVSNLIVKACEEYGFFKVRNHGVPHDIIARM 60

Query: 66  EQESVNFFEKPLAEKQRAGPANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSIAQRSKSIS 125
           E ES NFF K   EKQ+AG AN FGYGCKNIGFNGD GEVE+LL +TNPLSIA+RSK+IS
Sbjct: 61  ENESSNFFAKTFDEKQKAGLANSFGYGCKNIGFNGDTGEVEYLLFNTNPLSIAERSKTIS 120

Query: 126 NDPSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHYP- 184
           NDP++F SAM+ YI AVRELACE+LDLMAEGLWV D S FS++IRD ++DS  R+NHYP 
Sbjct: 121 NDPTEFSSAMSGYIEAVRELACELLDLMAEGLWVPDRSVFSRLIRDDDSDSIIRLNHYPP 180

Query: 185 -----------SCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPA 233
                      S CN+N  RVGFGEHSDPQILTILRSNDVGGLQIS + GVW+PV PDP+
Sbjct: 181 MPILCKDKDSSSPCNHN--RVGFGEHSDPQILTILRSNDVGGLQISLNDGVWVPVTPDPS 238

Query: 234 AFCVNVGDVLQAMTNGRFVSVRHRALSDSSQSRMSMAYFGAPALQARVSAPPEMVTTNRP 293
           AFCVNVGD+LQAMTNGRFVSVRH+AL++S +SRMSMAYF AP L AR++ PPEMVT  +P
Sbjct: 239 AFCVNVGDLLQAMTNGRFVSVRHKALTNSYKSRMSMAYFAAPPLNARIAVPPEMVTPIKP 298

Query: 294 SLYRPFTWAEYKATAYSLSLGDNRLDLF 321
           +LYRPF+WAE+K  A++L LGD+RL LF
Sbjct: 299 ALYRPFSWAEFKKAAFALRLGDSRLGLF 326

Source: Populus alba x Populus tremuloides

Species: Populus alba x Populus tremuloides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255556484|ref|XP_002519276.1| gibberellin 2-oxidase, putative [Ricinus communis] gi|223541591|gb|EEF43140.1| gibberellin 2-oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|380448150|gb|AFD54198.1| gibberellin 2-beta-dioxygenase 4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432055|ref|XP_002280426.1| PREDICTED: gibberellin 2-beta-dioxygenase 2 [Vitis vinifera] gi|296083208|emb|CBI22844.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|340796367|gb|AEK70422.1| GA2ox6 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|340796365|gb|AEK70421.1| GA2ox5 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|297744020|emb|CBI36990.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225437645|ref|XP_002272155.1| PREDICTED: gibberellin 2-beta-dioxygenase 2 [Vitis vinifera] gi|147843548|emb|CAN79462.1| hypothetical protein VITISV_042495 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224101511|ref|XP_002312310.1| gibberellin 2-oxidase [Populus trichocarpa] gi|222852130|gb|EEE89677.1| gibberellin 2-oxidase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224064641|ref|XP_002301530.1| gibberellin 2-oxidase [Populus trichocarpa] gi|222843256|gb|EEE80803.1| gibberellin 2-oxidase [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query334
TAIR|locus:2204823329 GA2OX6 "gibberellin 2-oxidase 0.946 0.960 0.536 4.6e-89
TAIR|locus:2202587321 GA2OX4 "gibberellin 2-oxidase 0.904 0.940 0.567 2.5e-88
UNIPROTKB|Q5W726382 OSJNBa0017J22.4 "Gibberellin 2 0.5 0.437 0.494 1.2e-87
TAIR|locus:2198258341 GA2OX2 "gibberellin 2-oxidase" 0.922 0.903 0.456 3.2e-72
UNIPROTKB|Q8S0S6327 OJ1414_E05.17 "cDNA clone:001- 0.880 0.899 0.448 6.5e-67
TAIR|locus:505006289335 ATGA2OX3 "gibberellin 2-oxidas 0.886 0.883 0.433 1.5e-65
TAIR|locus:2032080329 ATGA2OX1 "Arabidopsis thaliana 0.880 0.893 0.444 2e-65
UNIPROTKB|Q68Y45242 P0022D06.9 "Putative gibberell 0.359 0.495 0.460 1.1e-46
TAIR|locus:2165341378 GA20OX2 "gibberellin 20 oxidas 0.886 0.783 0.352 5.9e-41
TAIR|locus:2005511377 GA20OX1 [Arabidopsis thaliana 0.832 0.737 0.342 1.3e-38
TAIR|locus:2204823 GA2OX6 "gibberellin 2-oxidase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
 Identities = 175/326 (53%), Positives = 228/326 (69%)

Query:     6 MVVASPNPVRN--EKILA---IDLPMIDLSA-DRSEVGKLIVRACEEYGFFKVINHGVPE 59
             MV+ S  P++   +K ++    + P+ID S  DRS++ + IV+ACE  GFFKVINHGV  
Sbjct:     1 MVLPSSTPLQTTGKKTISSPEYNFPVIDFSLNDRSKLSEKIVKACEVNGFFKVINHGVKP 60

Query:    60 GVIAEMEQESVNFFEKPLAEKQRAGPANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSIAQ 119
              +I   E E   FF KP ++K RAGPA+PFGYGCKNIGFNGD+GE+E+LLLH NP ++A 
Sbjct:    61 EIIKRFEHEGEEFFNKPESDKLRAGPASPFGYGCKNIGFNGDLGELEYLLLHANPTAVAD 120

Query:   120 RSKSISND-PSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFF 178
             +S++IS+D P KF SA N+YIR VR+LACEI+DL  E LW +  S  S++IRDV +DS  
Sbjct:   121 KSETISHDDPFKFSSATNDYIRTVRDLACEIIDLTIENLWGQKSSEVSELIRDVRSDSIL 180

Query:   179 RINHYPSC--CNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFC 236
             R+NHYP      +   ++GFGEHSDPQILT+LRSNDV GL+I    G+WIP+  DP  F 
Sbjct:   181 RLNHYPPAPYALSGVGQIGFGEHSDPQILTVLRSNDVDGLEICSRDGLWIPIPSDPTCFF 240

Query:   237 VNVGDVLQAMTNGRFVSVRHRALSDSSQS-RMSMAYFGAPALQARVSAPPEMVTTNRPSL 295
             V VGD LQA+TNGRF SVRHR L+++++  RMS  YF AP L+A++S  P+MV+   P  
Sbjct:   241 VLVGDCLQALTNGRFTSVRHRVLANTAKKPRMSAMYFAAPPLEAKISPLPKMVSPENPRR 300

Query:   296 YRPFTWAEYKATAYSLSLGDNRLDLF 321
             Y  FTW +YK   YSL L   RL+ F
Sbjct:   301 YNSFTWGDYKKATYSLRLDVPRLEFF 326
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009639 "response to red or far red light" evidence=IEP
GO:0045487 "gibberellin catabolic process" evidence=IDA
GO:0052634 "C-19 gibberellin 2-beta-dioxygenase activity" evidence=IDA
GO:0052635 "C-20 gibberellin 2-beta-dioxygenase activity" evidence=IDA
GO:0010286 "heat acclimation" evidence=RCA
TAIR|locus:2202587 GA2OX4 "gibberellin 2-oxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5W726 OSJNBa0017J22.4 "Gibberellin 2-oxidase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2198258 GA2OX2 "gibberellin 2-oxidase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8S0S6 OJ1414_E05.17 "cDNA clone:001-031-D01, full insert sequence" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:505006289 ATGA2OX3 "gibberellin 2-oxidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032080 ATGA2OX1 "Arabidopsis thaliana gibberellin 2-oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q68Y45 P0022D06.9 "Putative gibberellin 2-oxidase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2165341 GA20OX2 "gibberellin 20 oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005511 GA20OX1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9XHM5G2OX2_PEA1, ., 1, 4, ., 1, 1, ., 1, 30.57390.96700.9362N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.963
4th Layer1.14.11.11LOW CONFIDENCE prediction!
3rd Layer1.14.11.130.946
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-98
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 8e-59
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 5e-56
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 4e-52
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 2e-50
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 6e-49
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-46
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-42
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 3e-42
PLN02947374 PLN02947, PLN02947, oxidoreductase 8e-42
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-41
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 2e-39
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 4e-37
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 5e-37
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-35
PLN02904357 PLN02904, PLN02904, oxidoreductase 4e-33
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-32
PLN02704335 PLN02704, PLN02704, flavonol synthase 4e-32
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 5e-30
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-29
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 8e-29
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 2e-28
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 6e-27
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 1e-24
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-23
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-23
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 6e-15
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-07
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information 
 Score =  294 bits (753), Expect = 1e-98
 Identities = 129/300 (43%), Positives = 194/300 (64%), Gaps = 4/300 (1%)

Query: 24  LPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAEKQRA 83
           +P+IDL+   S+    IV+ACEE+GFFKVINHGV   ++ ++EQE++ FF  P + K +A
Sbjct: 27  IPVIDLT--DSDAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKA 84

Query: 84  GPANPFGYGCKNIGFNGDMGEVEFLLLHTNP-LSIAQRSKSISNDPSKFGSAMNNYIRAV 142
           GP +PFGYG K IG NGD+G +E++LL+ N  L   + +    + P+ F  A+  Y++ +
Sbjct: 85  GPPDPFGYGTKRIGPNGDVGWLEYILLNANLCLESHKTTAVFRHTPAIFREAVEEYMKEM 144

Query: 143 RELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHYPSCCNN-NTTRVGFGEHSD 201
           + ++ ++L+++ E L +      SK+++  E+DS  R+NHYP          +GFGEH+D
Sbjct: 145 KRMSSKVLEMVEEELKIEPKEKLSKLVKVKESDSCLRMNHYPEKEETPEKVEIGFGEHTD 204

Query: 202 PQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSVRHRALSD 261
           PQ++++LRSND  GLQI    G W+ V PD ++F V VGD LQ MTNGRF SV+HR +++
Sbjct: 205 PQLISLLRSNDTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTN 264

Query: 262 SSQSRMSMAYFGAPALQARVSAPPEMVTTNRPSLYRPFTWAEYKATAYSLSLGDNRLDLF 321
           + +SR+SM YF  P L  +++    +V      LY  FTW++YK +AY   LGD RL LF
Sbjct: 265 TKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKTKLGDYRLGLF 324

Length = 335
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 334
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02216357 protein SRG1 100.0
PLN02997325 flavonol synthase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02947374 oxidoreductase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02704335 flavonol synthase 100.0
PLN02485329 oxidoreductase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.9
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.84
PLN03176120 flavanone-3-hydroxylase; Provisional 99.71
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.45
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.5
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 93.29
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 91.65
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information 
Probab=100.00  E-value=5.5e-74  Score=534.14  Aligned_cols=301  Identities=43%  Similarity=0.818  Sum_probs=263.0

Q ss_pred             CCCCceeeCCCCCHHHHHHHHHHHHhccEEEEEecCCCHHHHHHHHHHhhHhcCCCHHHHhhcCCCCCCCcccccCCCCC
Q 019891           21 AIDLPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAEKQRAGPANPFGYGCKNIGFNG  100 (334)
Q Consensus        21 ~~~iPvIDls~~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~GY~~~~~~~~~  100 (334)
                      ...||||||+.  .+..++|.+||++||||||+||||+.++++++++++++||+||.|+|+++...+.+||+....+..+
T Consensus        24 ~~~iPvIDls~--~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~e~K~~~~~~~~~Gy~~~~~~~~~  101 (335)
T PLN02156         24 PVLIPVIDLTD--SDAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAIGFFALPHSLKDKAGPPDPFGYGTKRIGPNG  101 (335)
T ss_pred             CCCCCcccCCC--hHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHhhcCCCCCcccCccccCCCC
Confidence            34699999984  3457899999999999999999999999999999999999999999999976566799765444445


Q ss_pred             CCCceeeEeccCCCchh-hhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchhhhhhccCCCcceEE
Q 019891          101 DMGEVEFLLLHTNPLSI-AQRSKSISNDPSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFR  179 (334)
Q Consensus       101 ~~~~~e~~~~~~~~~~~-~~~~~~wp~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~~lr  179 (334)
                      ..+|.|.+.+...+... ...+|.||+.++.||+.+.+|+++|.+|+.+|+++|+++||++.+++|.+++.+..+.+.||
T Consensus       102 ~~~~~e~~~~~~~~~~~~~~~~~~wp~~p~~fr~~~~~Y~~~~~~L~~~ll~~la~~LGl~~~~~f~~~~~~~~~~~~lR  181 (335)
T PLN02156        102 DVGWLEYILLNANLCLESHKTTAVFRHTPAIFREAVEEYMKEMKRMSSKVLEMVEEELKIEPKEKLSKLVKVKESDSCLR  181 (335)
T ss_pred             CCCceeeEeeecCCccccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCcHHHHHHHhcCCCccceEe
Confidence            56889988776544321 12468899888999999999999999999999999999999963478888775434568999


Q ss_pred             EeecCCCCCC-CCCcccccCCCCCCceeEEeeCCCCCcceeCCCCcEEeccCCCCcEEEEccchhHHhhCCceecccccc
Q 019891          180 INHYPSCCNN-NTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSVRHRA  258 (334)
Q Consensus       180 l~~Yp~~~~~-~~~~~~~~~HtD~g~lTlL~~d~~~GLqV~~~~g~W~~V~~~~~~~vVnvGd~l~~~TnG~~~s~~HRV  258 (334)
                      ++|||+++.. ....+|+++|||+|+||||+||+++||||+.++|+|++|+|.||++|||+||+||+||||+|+|+.|||
T Consensus       182 l~~YP~~~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~~~~g~Wi~Vpp~pga~VVNiGD~l~~wTNg~~kSt~HRV  261 (335)
T PLN02156        182 MNHYPEKEETPEKVEIGFGEHTDPQLISLLRSNDTAGLQICVKDGTWVDVPPDHSSFFVLVGDTLQVMTNGRFKSVKHRV  261 (335)
T ss_pred             EEeCCCCCCCccccccCCCCccCCCceEEEEeCCCCceEEEeCCCCEEEccCCCCcEEEEhHHHHHHHhCCeeeccceee
Confidence            9999999753 235789999999999999999999999998788999999999999999999999999999999999999


Q ss_pred             ccCCCCCeEEEEEeeCCCCCceEeCCCCCcCCCCCCCcCCccHHHHHHHHHhcccCccccccccc
Q 019891          259 LSDSSQSRMSMAYFGAPALQARVSAPPEMVTTNRPSLYRPFTWAEYKATAYSLSLGDNRLDLFIN  323 (334)
Q Consensus       259 v~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~  323 (334)
                      +.+...+|||++||++|+.|++|.|+++++++++|++|++++|+||+..++.+.++..+++.+..
T Consensus       262 v~~~~~~R~SiafF~~P~~d~~i~pl~~~v~~~~p~~y~p~~~~ey~~~~~~~~~~~~~~~~~~~  326 (335)
T PLN02156        262 VTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKTKLGDYRLGLFEK  326 (335)
T ss_pred             ecCCCCCEEEEEEeecCCCCCEEeCChHhcCCCCCccCCCccHHHHHHHHHhccCCCccchhhhc
Confidence            98878899999999999999999999999999999999999999999999988877656665554

>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-24
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-24
1w9y_A319 The Structure Of Acc Oxidase Length = 319 2e-23
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-23
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-10
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 7e-10
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 140/297 (47%), Gaps = 22/297 (7%)
Query: 24  LPMIDLSADRSEVGKL-------IVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKP 76
           +P IDL    S+  K+       + +A  ++G   +INHG+P  ++  +++    FF   
Sbjct: 46  VPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLS 105
Query: 77  LAEKQR----AGPANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSIAQRSKSIS---NDPS 129
           + EK++           GYG K         E E    H   L+  +  + +S     PS
Sbjct: 106 VEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFH---LAYPEEKRDLSIWPKTPS 162
Query: 130 KFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSF-FRINHYPSCCN 188
            +  A + Y + +R LA ++   ++ GL + +P    K +  +E      +IN+YP C  
Sbjct: 163 DYIEATSEYAKCLRLLATKVFKALSVGLGL-EPDRLEKEVGGLEELLLQMKINYYPKCPQ 221
Query: 189 NNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTN 248
                +G   H+D   LT +  N V GLQ+  + G W+     P +  +++GD L+ ++N
Sbjct: 222 PELA-LGVEAHTDVSALTFILHNMVPGLQLFYE-GKWVTAKCVPDSIVMHIGDTLEILSN 279
Query: 249 GRFVSVRHRALSDSSQSRMSMAYFGAPALQARVSAP-PEMVTTNRPSLYRPFTWAEY 304
           G++ S+ HR L +  + R+S A F  P     V  P PEMV+   P+ + P T+A++
Sbjct: 280 GKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQH 336
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 3e-94
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 4e-89
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 5e-87
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-72
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 3e-69
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 4e-67
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
 Score =  280 bits (719), Expect = 3e-94
 Identities = 59/274 (21%), Positives = 106/274 (38%), Gaps = 21/274 (7%)

Query: 21  AIDLPMIDLSADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAEK 80
            + L  ID     ++  K  V +  E GF  + NH + + ++  +  E   FF      +
Sbjct: 1   GMKLETIDYR--AADSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNSEAKNE 58

Query: 81  QRAGPANPFGYGCKNIGFNGDMGEVEFLL--LHTNPLSIAQRSKSISNDPSKFGSAMNNY 138
                    G+   +I        V+ +    H  P             P    + +  Y
Sbjct: 59  FMFNRETHDGFFPASISETAKGHTVKDIKEYYHVYP---------WGRIPDSLRANILAY 109

Query: 139 IRAVRELACEILDLMAEGLWVRDPSYFSKMIRDV---ENDSFFRINHYPSCCNN-NTTRV 194
                 LA E+L+ +         + FS  + ++    + +  RI HYP    +     +
Sbjct: 110 YEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAI 169

Query: 195 GFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSV 254
               H D  ++T+L + +  GLQ+    G W+ V  D     +N+GD+LQ  ++G F S 
Sbjct: 170 RAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPST 229

Query: 255 RHRALS----DSSQSRMSMAYFGAPALQARVSAP 284
            HR ++    D ++SR+S+  F  P     +S  
Sbjct: 230 SHRVINPEGTDKTKSRISLPLFLHPHPSVVLSER 263
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query334
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 94.47
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 92.42
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 91.88
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=2.4e-73  Score=527.85  Aligned_cols=288  Identities=20%  Similarity=0.348  Sum_probs=251.0

Q ss_pred             CCCCCCceeeCCCC---CHHHHHHHHHHHHhccEEEEEecCCCHHHHHHHHHHhhHhcCCCHHHHhhcCC--CCCCCccc
Q 019891           19 ILAIDLPMIDLSAD---RSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAEKQRAGP--ANPFGYGC   93 (334)
Q Consensus        19 ~~~~~iPvIDls~~---~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~--~~~~GY~~   93 (334)
                      |+..+||||||+.+   +.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++..  ...+||..
T Consensus         2 m~~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~   81 (312)
T 3oox_A            2 MSTSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIP   81 (312)
T ss_dssp             --CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEEC
T ss_pred             CCCCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccc
Confidence            34578999999863   56789999999999999999999999999999999999999999999999954  34578854


Q ss_pred             ccCC---CCCCCCceeeEeccCCCch-----hhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchh
Q 019891           94 KNIG---FNGDMGEVEFLLLHTNPLS-----IAQRSKSISNDPSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYF  165 (334)
Q Consensus        94 ~~~~---~~~~~~~~e~~~~~~~~~~-----~~~~~~~wp~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~  165 (334)
                      .+..   .....|++|.+.++.+...     ....+|.||+.+|+||+.+++|+++|.+++.+||++|+++||++ +++|
T Consensus        82 ~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f  160 (312)
T 3oox_A           82 FGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE-RDFF  160 (312)
T ss_dssp             CCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TTTT
T ss_pred             ccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-HHHH
Confidence            3322   2245788999887542211     11236899999999999999999999999999999999999998 8899


Q ss_pred             hhhhccCCCcceEEEeecCCCCCCCCCcccccCCCCCCceeEEeeCCCCCcceeCCCCcEEeccCCCCcEEEEccchhHH
Q 019891          166 SKMIRDVENDSFFRINHYPSCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQA  245 (334)
Q Consensus       166 ~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~~HtD~g~lTlL~~d~~~GLqV~~~~g~W~~V~~~~~~~vVnvGd~l~~  245 (334)
                      .+.+.+  +.+.||++||||++.+ ...+|+++|||+|+||||+||+++||||++++|+|++|+|.||++|||+||+||+
T Consensus       161 ~~~~~~--~~~~lr~~~Ypp~~~~-~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~  237 (312)
T 3oox_A          161 KPTVQD--GNSVLRLLHYPPIPKD-ATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLER  237 (312)
T ss_dssp             HHHHTT--CCCEEEEEEECCCSSC-CC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHH
T ss_pred             HHHhcC--CcceeeeEecCCCCCC-cCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHH
Confidence            988853  5689999999999875 3349999999999999999999999999988999999999999999999999999


Q ss_pred             hhCCceeccccccccCC----CCCeEEEEEeeCCCCCceEeCCCCCcCCCCCCCcC-CccHHHHHHHHHh
Q 019891          246 MTNGRFVSVRHRALSDS----SQSRMSMAYFGAPALQARVSAPPEMVTTNRPSLYR-PFTWAEYKATAYS  310 (334)
Q Consensus       246 ~TnG~~~s~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~~~~y~-~~~~~e~~~~~~~  310 (334)
                      ||||+|+|++|||+.+.    ..+|||++||++|+.|++|+|+++++++++|++|+ ++|++||+..+++
T Consensus       238 ~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~  307 (312)
T 3oox_A          238 LTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLR  307 (312)
T ss_dssp             HTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHH
T ss_pred             HhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHH
Confidence            99999999999998753    56899999999999999999999999999999999 9999999998876
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 334
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 7e-60
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 4e-56
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 3e-47
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 1e-38
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

 Score =  192 bits (488), Expect = 7e-60
 Identities = 70/308 (22%), Positives = 135/308 (43%), Gaps = 15/308 (4%)

Query: 23  DLPMIDLS----ADRSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLA 78
           + P+I L      +R+   ++I  ACE +GFF+++NHG+P  V+  +E+ +   ++K + 
Sbjct: 2   NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCME 61

Query: 79  EKQRAGPANPFGYGCKNIGFNGDMGEVEFLLLHTNPLSIAQRSKSISNDPSKFGSAMNNY 138
           ++ +   A+    G +    + D     FL               + +   ++   M ++
Sbjct: 62  QRFKELVASKALEGVQAEVTDMDWESTFFLKHLPI-----SNISEVPDLDEEYREVMRDF 116

Query: 139 IRAVRELACEILDLMAEGLWVRDPSYFSKMIRDVENDSFFRINHYPSCCNNNTTRVGFGE 198
            + + +LA E+LDL+ E L +      +        +   ++++YP C   +  +     
Sbjct: 117 AKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKG-LRA 175

Query: 199 HSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQAMTNGRFVSVRHRA 258
           H+D   + +L  +D          G WI V P   +  VN+GD L+ +TNG++ SV HR 
Sbjct: 176 HTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRV 235

Query: 259 LSDSSQSRMSMAYFGAPALQARVSAPPEMV---TTNRPSLYRPFTWAEYKATAYSLSL-- 313
           ++    +RMS+A F  P   A +   P +V         +Y  F + +Y      L    
Sbjct: 236 IAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQA 295

Query: 314 GDNRLDLF 321
            + R +  
Sbjct: 296 KEPRFEAM 303
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query334
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 89.99
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7e-69  Score=503.92  Aligned_cols=290  Identities=26%  Similarity=0.444  Sum_probs=247.2

Q ss_pred             CCCCCCceeeCCCC-------CHHHHHHHHHHHHhccEEEEEecCCCHHHHHHHHHHhhHhcCCCHHHHhhcCCCCC---
Q 019891           19 ILAIDLPMIDLSAD-------RSEVGKLIVRACEEYGFFKVINHGVPEGVIAEMEQESVNFFEKPLAEKQRAGPANP---   88 (334)
Q Consensus        19 ~~~~~iPvIDls~~-------~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~---   88 (334)
                      .+..+||||||+.+       +++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++.....   
T Consensus        41 ~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~  120 (349)
T d1gp6a_          41 EDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK  120 (349)
T ss_dssp             CCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTB
T ss_pred             CCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCC
Confidence            44568999999974       35788999999999999999999999999999999999999999999999954322   


Q ss_pred             -CCcccccC-CCCCCCCceeeEeccCCCchhhhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchhh
Q 019891           89 -FGYGCKNI-GFNGDMGEVEFLLLHTNPLSIAQRSKSISNDPSKFGSAMNNYIRAVRELACEILDLMAEGLWVRDPSYFS  166 (334)
Q Consensus        89 -~GY~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~wp~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~  166 (334)
                       .||+.... +..+..++.+.......+. ....++.||+.++.|++.+.+|++.|.+++.+|+++++++||++ +++|.
T Consensus       121 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~-~~~~~  198 (349)
T d1gp6a_         121 IQGYGSKLANNASGQLEWEDYFFHLAYPE-EKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLE-PDRLE  198 (349)
T ss_dssp             CSEEECCCCCSTTCCCCSCEEEEEEEESG-GGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TTHHH
T ss_pred             ccccccccccccccccchhhhhccccccc-ccccccccccccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCC-HHHHH
Confidence             23333222 2334455555433221111 12457899999999999999999999999999999999999998 78888


Q ss_pred             hhhcc-CCCcceEEEeecCCCCCCCCCcccccCCCCCCceeEEeeCCCCCcceeCCCCcEEeccCCCCcEEEEccchhHH
Q 019891          167 KMIRD-VENDSFFRINHYPSCCNNNTTRVGFGEHSDPQILTILRSNDVGGLQISPDHGVWIPVAPDPAAFCVNVGDVLQA  245 (334)
Q Consensus       167 ~~~~~-~~~~~~lrl~~Yp~~~~~~~~~~~~~~HtD~g~lTlL~~d~~~GLqV~~~~g~W~~V~~~~~~~vVnvGd~l~~  245 (334)
                      +.+.. ....+.||++|||+++.. ...+|+++|||+|+||||+|+.++||||+ .+|+|++|+|.+|++|||+||+||+
T Consensus       199 ~~~~~~~~~~~~lrl~~Yp~~~~~-~~~~g~~~HtD~g~lTlL~q~~~~GLqv~-~~g~W~~V~p~~~a~vVNvGD~l~~  276 (349)
T d1gp6a_         199 KEVGGLEELLLQMKINYYPKCPQP-ELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDTLEI  276 (349)
T ss_dssp             HHTTHHHHCEEEEEEEEECCCSST-TTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHH
T ss_pred             HHhccccccceeeeecccccccch-hhccccccCCCCcceEEEeccCCcceeee-cCCceEEccCCCCCeeeeHHhHHHH
Confidence            77631 235678999999999874 67899999999999999999999999997 4899999999999999999999999


Q ss_pred             hhCCceeccccccccCCCCCeEEEEEeeCCCCCceE-eCCCCCcCCCCCCCcCCccHHHHHHHHHhcc
Q 019891          246 MTNGRFVSVRHRALSDSSQSRMSMAYFGAPALQARV-SAPPEMVTTNRPSLYRPFTWAEYKATAYSLS  312 (334)
Q Consensus       246 ~TnG~~~s~~HRVv~~~~~~R~Si~~F~~P~~d~~i-~pl~~~~~~~~~~~y~~~~~~e~~~~~~~~~  312 (334)
                      ||||+|+||+|||+.+++.+||||+||++|+.|++| +|+++|+++++|++|+|+|++||++.++..+
T Consensus       277 ~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y~~~t~~e~~~~rl~~~  344 (349)
T d1gp6a_         277 LSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGK  344 (349)
T ss_dssp             HTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHH
T ss_pred             HhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCCCCCCCCCCccHHHHHHHHHhcc
Confidence            999999999999999888999999999999999865 8999999999999999999999999987543
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure