Citrus Sinensis ID: 019919

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330----
Protein Sequence
METPEFYIGGYFNAASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGFFENVAANSTDSSTVTSNSAVSGGENNFPANFSGCRSSNSFADSQFCGELCVPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSLTPESSSSSTRLEPVSPKASNPVFLPETPLPGKARSKRPRAAPCDWSTRLLHVSPKGPSVERESPNPLMHTESGDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKVMELRRQKEMQRAPQQQFLGQRSIFGVSNGADDYLIHHPSGPDFRHMI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHcccccccccccccccccccEEEccccccccccccEEHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccHHHcccEEEccccccccccccccccccccHccccHHHHHHHHHHHHHcccccHcccccccEEccccccccEEEEcccccccHHcc
Coil and Loop (DISEMBL)
metpefyiggyfnaastnnfssEKRVVVAadqkpgenfnfTVEDLldfsnddaimndggffenvaanstdsstvtsnsavsggennfpanfsgcrssnsfadsqfcgelcvpyddlaELEWLSNFVEdsfsmdqtlqksdleflsgsksltpessssstrlepvspkasnpvflpetplpgkarskrpraapcdwstrllhvspkgpsverespnplmhtesgdsvrKCLHCasektpqwrtgpmgpktlcnacgvryksgrlvpeyrpaasptfvsakhsnsHRKVMELRRQKEMqrapqqqflgqrsifgvsngaddylihhpsgpdfrhmi
Flexible Loop (DISEMBL)
metpefyiGGYFnaastnnfsSEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGFFENVAANSTDSSTVTSNSAVSGGENNFPANFSGCRSSNSFADSQFCGELCVPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFlsgsksltpessssstrlepvspkasnpvflpetplpgkarskrpraapcdwstrllhvspkgpsverespnplmhtesgdsvRKCLHCASektpqwrtgpmgpKTLCNACGVRYKSGRLVPEYRPaasptfvsakhsnsHRKVMELRRQKEMQRAPQQQFLGQRSIFGVSNGADDYLIhhpsgpdfrhmi
Low Complexity Region (SEG)
METPEFYIGGYFNAASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGFFENvaanstdsstvtsnsavsGGENNFPANFSGCRSSNSFADSQFCGELCVPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFlsgsksltpessssstrlepvspKASNPVFLPETPLPGKARSKRPRAAPCDWSTRLLHVSPKGPSVERESPNPLMHTESGDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKVMELRRQKEMQRAPQQQFLGQRSIFGVSNGADDYLIHHPSGPDFRHMI
Disordered region (IsUnstruct)
*****FYIGGYFNAASTNNFS**KRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGFFENV***********************************FADSQFCGELCVPYDDLAELEWLSNFVEDSF**************************************************************************************************CLHC*******WRTGPMGPKTLCNACGVRYKSGRLVP*******************************************SIFGVSNGADDYLI************
Disordered Region (DISOPRED)
***PE**IGGYFNAAST*****************GENFNFTVEDLLDFSNDDAIMND**************************************************ELCVPYDDLAELEWLSNFVE*******************************************************************************************************HCASEKTPQWRTGPMGPKTLCNACGVR********************************************************************S******M*
Disordered Region (DISEMBL)
METPEFYIGGYFNAASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGFFENVAANS************SGGENNFPANFSGCRSSNSFADSQFCGELCVPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFLSG**********************SNPVFLPETPLP************CDWSTRLLHVS**********************VRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPT*************MELR**********QQFLGQRSIFGVSNGADDYLIHHPSGPDFRHMI
Disordered Region (DISPRO)
****EFYIGGYFNAASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSN*****************************************************QFCGELCVPYDDLAELEWLSNFVEDSFSMDQT******************************************************************************************VRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSN**RKVMELRRQKEMQ*******LGQRSIFGVSNGADDYLIHHPSGPDF****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METPEFYIGGYFNAASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGFFENVAANSTDSSTVTSNSAVSGGENNFPANFSGCRSSNSFADSQFCGELCVPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSLTPESSSSSTRLEPVSPKASNPVFLPETPLPGKARSKRPRAAPCDWSTRLLHVSPKGPSVERESPNPLMHTESGDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKVMELRRQKEMQRAPQQQFLGQRSIFGVSNGADDYLIHHPSGPDFRHMI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	334	2.2.26 [Sep-21-2011]
P69781	331	GATA transcription factor	yes	no	0.826	0.833	0.477	3e-65
O82632	308	GATA transcription factor	no	no	0.823	0.892	0.443	2e-61
O49743	240	GATA transcription factor	no	no	0.473	0.658	0.507	2e-43
O49741	264	GATA transcription factor	no	no	0.508	0.643	0.472	7e-43
Q9FH57	339	GATA transcription factor	no	no	0.568	0.560	0.431	1e-36
O65515	238	GATA transcription factor	no	no	0.589	0.827	0.370	2e-32
Q6DBP8	303	GATA transcription factor	no	no	0.332	0.366	0.515	5e-29
Q8LAU9	274	GATA transcription factor	no	no	0.200	0.244	0.791	5e-28
Q9SV30	322	GATA transcription factor	no	no	0.206	0.214	0.768	5e-28
Q8L4M6	269	GATA transcription factor	no	no	0.458	0.568	0.405	5e-28

>sp|P69781|GAT12_ARATH GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1

 Score =  249 bits (635), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 162/339 (47%), Positives = 201/339 (59%), Gaps = 63/339 (18%)

Query: 39  NFTVEDLL-DFSNDDAIMNDGGFFENVAANSTDSSTVTSNSAVSGGENNFPANFSGCRSS 97
           +F V+DLL DFSNDD   ND      V A+ST ++T+T +S  S    + P+     +  
Sbjct: 13  DFAVDDLLVDFSNDDDEEND------VVADSTTTTTITDSSNFSAA--DLPSFHGDVQDG 64

Query: 98  NSFADSQFCGELCVPYDDLA-ELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSL-TPESS 155
            SF+     G+LC+P DDLA ELEWLSN V++S S +   +   LE +SG KS   P+S 
Sbjct: 65  TSFS-----GDLCIPSDDLADELEWLSNIVDESLSPEDVHK---LELISGFKSRPDPKSD 116

Query: 156 SSSTRLEPVSPKASNPVFLPETPLPGKARSKRPRAAPCDWSTRLL--------------- 200
           + S    P +P +S+P+F  +  +P KARSKR RAA C+W++R L               
Sbjct: 117 TGS----PENPNSSSPIFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETI 172

Query: 201 -----HVSP------------KGPSVE---RESPNPLMHTESGDSVRKCLHCASEKTPQW 240
                H+SP            K  +V+   R   +       G   R+CLHCA++KTPQW
Sbjct: 173 LSSQQHLSPPTSPPLLMAPLGKKQAVDGGHRRKKDVSSPESGGAEERRCLHCATDKTPQW 232

Query: 241 RTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKVMELRRQKEMQRAP 300
           RTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV AKHSNSHRKVMELRRQKEM RA 
Sbjct: 233 RTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRKVMELRRQKEMSRAH 292

Query: 301 QQQFLGQRS-----IFGVSNGADDYLIHHPSGPDFRHMI 334
            +            IF VS+  DDYLIHH  GPDFR +I
Sbjct: 293 HEFIHHHHGTDTAMIFDVSSDGDDYLIHHNVGPDFRQLI 331

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.
Arabidopsis thaliana (taxid: 3702)

>sp|O82632|GATA9_ARATH GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1

 Score =  236 bits (602), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 186/311 (59%), Gaps = 36/311 (11%)

Query: 40  FTVEDLLDFSNDDAIMNDGGFFENVAANSTDSSTVTSNSAVSGGENNFPANFSGCRSSNS 99
           F V+DLLDFSNDD  ++DG        N+   S+  S   ++   N          SS+ 
Sbjct: 18  FVVDDLLDFSNDDGEVDDG-------LNTLPDSSTLSTGTLTDSSN----------SSSL 60

Query: 100 FADSQFCGELCVPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSLTPESSSSST 159
           F D     +L +P DD+AELEWLSNFVE+SF+ +    +  L   SG K+     S+ + 
Sbjct: 61  FTDGTGFSDLYIPNDDIAELEWLSNFVEESFAGED---QDKLHLFSGLKNPQTTGSTLTH 117

Query: 160 RLEPVSPKASNPVFLPET--PLPGKARSKRPRAAPCDWSTRLLHVS--------PKGPSV 209
            ++P        + + E+   +P KARSKR R+A   W++RLL ++         K   V
Sbjct: 118 LIKPEPELDHQFIDIDESNVAVPAKARSKRSRSAASTWASRLLSLADSDETNPKKKQRRV 177

Query: 210 ERESPNPLMHTESGDSV--RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEY 267
           + +     M  + G+S   R+CLHCA+EKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEY
Sbjct: 178 KEQDFAGDMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEY 237

Query: 268 RPAASPTFVSAKHSNSHRKVMELRRQKEMQ-RAPQQQFLGQRSIFGVSNGADDYLIHHPS 326
           RPA+SPTFV A+HSNSHRKVMELRRQKEM+      Q   +  +  + +  +D+L+H+ +
Sbjct: 238 RPASSPTFVMARHSNSHRKVMELRRQKEMRDEHLLSQLRCENLLMDIRSNGEDFLMHNNT 297

Query: 327 ---GPDFRHMI 334
               PDFRH+I
Sbjct: 298 NHVAPDFRHLI 308

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|O49743|GATA4_ARATH GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1

 Score =  176 bits (446), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/205 (50%), Positives = 121/205 (59%), Gaps = 47/205 (22%)

Query: 103 SQFCGELCVPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSLTPESSSSSTRLE 162
           + F  +LCVP DD A LEWLS FV+DSFS          +F +   ++T           
Sbjct: 61  TDFTHDLCVPSDDAAHLEWLSRFVDDSFS----------DFPANPLTMT----------- 99

Query: 163 PVSPKASNPVFLPETPLPGKARSKRPRA-APC---DWS----TRLLHVSPKGPSVERESP 214
                       PE    GK RS+R RA AP     W+    + L H      SV +  P
Sbjct: 100 ----------VRPEISFTGKPRSRRSRAPAPSVAGTWAPMSESELCH------SVAKPKP 143

Query: 215 NPLMHTES--GDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAAS 272
             + + ES   D  R+C HCASEKTPQWRTGP+GPKTLCNACGVRYKSGRLVPEYRPA+S
Sbjct: 144 KKVYNAESVTADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASS 203

Query: 273 PTFVSAKHSNSHRKVMELRRQKEMQ 297
           PTFV  +HSNSHRKVMELRRQKE Q
Sbjct: 204 PTFVLTQHSNSHRKVMELRRQKEQQ 228

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|O49741|GATA2_ARATH GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2 SV=1

 Score =  174 bits (442), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 103/218 (47%), Positives = 122/218 (55%), Gaps = 48/218 (22%)

Query: 105 FCGELCVPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSLTPESSSSSTRLEPV 164
           F  ++CVP DD A LEWLS FV+DSF+          +F +     T  S  +       
Sbjct: 65  FLHDICVPSDDAAHLEWLSQFVDDSFA----------DFPANPLGGTMTSVKT------- 107

Query: 165 SPKASNPVFLPETPLPGKARSKRPRA----------APCDWSTRLLHVSPKGPSVERESP 214
                      ET  PGK RSKR RA           P +   + LH + K    + +S 
Sbjct: 108 -----------ETSFPGKPRSKRSRAPAPFAGTWSPMPLESEHQQLHSAAKFKPKKEQSG 156

Query: 215 NPLM----------HTESGDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLV 264
                          T  G  +R+C HCASEKTPQWRTGP+GPKTLCNACGVR+KSGRLV
Sbjct: 157 GGGGGGGRHQSSSSETTEGGGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLV 216

Query: 265 PEYRPAASPTFVSAKHSNSHRKVMELRRQKEMQRAPQQ 302
           PEYRPA+SPTFV  +HSNSHRKVMELRRQKE+ R PQQ
Sbjct: 217 PEYRPASSPTFVLTQHSNSHRKVMELRRQKEVMRQPQQ 254

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FH57|GATA5_ARATH GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1

 Score =  154 bits (389), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/248 (43%), Positives = 129/248 (52%), Gaps = 58/248 (23%)

Query: 89  ANFSGCRSSNSFADSQFCGELCVPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEF----L 144
           ++FSGC    S   S    EL +P DDLA LEWLS+FVEDSF+          E+    L
Sbjct: 87  SDFSGCDDFGSLPTS----ELSLPADDLANLEWLSHFVEDSFT----------EYSGPNL 132

Query: 145 SGSKSLTPESSSSSTRLEPVSPKASNPVFLPETPLPGKARSKRPRAAPCDWSTRLLHVSP 204
           +G+ +  P +  +  R  PV+       F  ++P+P KARSKR R     WS      S 
Sbjct: 133 TGTPTEKP-AWLTGDRKHPVTAVTEETCF--KSPVPAKARSKRNRNGLKVWSLGSSSSSG 189

Query: 205 KG------------------------PSVERESPN-PLMHTE-SGDSV-----------R 227
                                     P V  E P  P  H + S +SV           R
Sbjct: 190 PSSSGSTSSSSSGPSSPWFSGAELLEPVVTSERPPFPKKHKKRSAESVFSGELQQLQPQR 249

Query: 228 KCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKV 287
           KC HC  +KTPQWR GPMG KTLCNACGVRYKSGRL+PEYRPA SPTF S  HSN HRKV
Sbjct: 250 KCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKV 309

Query: 288 MELRRQKE 295
           +E+RR+KE
Sbjct: 310 IEMRRKKE 317

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|O65515|GATA7_ARATH GATA transcription factor 7 OS=Arabidopsis thaliana GN=GATA7 PE=2 SV=1

 Score =  140 bits (352), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/281 (37%), Positives = 131/281 (46%), Gaps = 84/281 (29%)

Query: 39  NFTVEDLLDFSNDDAIMNDGG--FFENVAANSTDSSTVTSNSAVSGGEN--NFPANFSGC 94
           +F+V+DLLD SN D  +        E+        S    ++ +S  E+  +FP +    
Sbjct: 10  DFSVDDLLDLSNADTSLESSSSQRKEDEQEREKFKSFSDQSTRLSPPEDLLSFPGD---- 65

Query: 95  RSSNSFADSQFCGELCVPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSLTPES 154
                            P  DL +LEWLSNFVEDSFS  ++   SD              
Sbjct: 66  ----------------APVGDLEDLEWLSNFVEDSFS--ESYISSDF------------- 94

Query: 155 SSSSTRLEPVSPKASNPVFLPETPLPGKARSKRPRAAPCDWSTRLLHVSPKGPSVERESP 214
                   PV+P AS  V +    +P K RSKR R     WS               ESP
Sbjct: 95  --------PVNPVAS--VEVRRQCVPVKPRSKRRRTNGRIWSM--------------ESP 130

Query: 215 NPLMHTESG--------------------DSVRKCL-HCASEKTPQWRTGPMGPKTLCNA 253
           +PL+ T                         +R+C  HC  +KTPQWR GP+G KTLCNA
Sbjct: 131 SPLLSTAVARRKKRGRQKVDASYGGVVQQQQLRRCCSHCGVQKTPQWRMGPLGAKTLCNA 190

Query: 254 CGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKVMELRRQK 294
           CGVR+KSGRL+PEYRPA SPTF +  HSNSHRKV+ELR  K
Sbjct: 191 CGVRFKSGRLLPEYRPACSPTFTNEIHSNSHRKVLELRLMK 231

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP8|GAT11_ARATH GATA transcription factor 11 OS=Arabidopsis thaliana GN=GATA11 PE=2 SV=1

 Score =  128 bits (322), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 67/130 (51%), Positives = 85/130 (65%), Gaps = 19/130 (14%)

Query: 175 PETPLPGKARSKRPRAAPCDWST-------RLLHVSPKGPSVERESPNPLMHTESGDSVR 227
           PE   PGK  S+      C +S+       R +H++ +  S   E+ N      S   VR
Sbjct: 173 PEKSTPGKPESE------CYFSSEQHAKKKRKIHLTTRTVSSTLEASN------SDGIVR 220

Query: 228 KCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKV 287
           KC HC + KTPQWR GP GPKTLCNACGVR++SGRLVPEYRPA+SPTF+ A HSNSHRK+
Sbjct: 221 KCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHRKI 280

Query: 288 MELRRQKEMQ 297
           +E+RR+ + Q
Sbjct: 281 IEMRRKDDEQ 290

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LAU9|GATA1_ARATH GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2

 Score =  125 bits (314), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query: 227 RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRK 286
           RKC HC +EKTPQWR GP GPKTLCNACGVRYKSGRLVPEYRPA SPTF +  HSNSHRK
Sbjct: 194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRK 253

Query: 287 VMELRRQ 293
           ++E+R+Q
Sbjct: 254 IVEMRKQ 260

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV30|GATA8_ARATH GATA transcription factor 8 OS=Arabidopsis thaliana GN=GATA8 PE=2 SV=1

 Score =  125 bits (314), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 53/69 (76%), Positives = 59/69 (85%)

Query: 226 VRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHR 285
           +RKC+HC   KTPQWR GPMGPKTLCNACGVRYKSGRL PEYRPAASPTF  A HSNSH+
Sbjct: 228 LRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPALHSNSHK 287

Query: 286 KVMELRRQK 294
           KV E+R ++
Sbjct: 288 KVAEMRNKR 296

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4M6|GATA3_ARATH GATA transcription factor 3 OS=Arabidopsis thaliana GN=GATA3 PE=2 SV=2

 Score =  125 bits (313), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/190 (40%), Positives = 100/190 (52%), Gaps = 37/190 (19%)

Query: 111 VPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSLTPESSSSSTRLEPVSPKASN 170
           +P +D+ ELEW+S  V+D  S                    PE S   T+     P  S 
Sbjct: 93  LPDEDVEELEWVSRVVDDCSS--------------------PEVSLLLTQTHKTKPSFSR 132

Query: 171 PVFLPETPLPGKARSKRPRAAPCDWSTRLLHVSPKGPSVERESPNPLMHTESGDSV---- 226
                   +P K R+KR R      S     V P   +  + +    +  +  ++V    
Sbjct: 133 --------IPVKPRTKRSRN-----SLTGSRVWPLVSTNHQHAATEQLRKKKQETVLVFQ 179

Query: 227 RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRK 286
           R+C HC +  TPQWRTGP+GPKTLCNACGVR+KSGRL PEYRPA SPTF +  HSN HRK
Sbjct: 180 RRCSHCGTNNTPQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPADSPTFSNEIHSNLHRK 239

Query: 287 VMELRRQKEM 296
           V+ELR+ KE+
Sbjct: 240 VLELRKSKEL 249

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
255549860	338	GATA transcription factor, putative [Ric	0.982	0.970	0.616	1e-102
225442507	329	PREDICTED: GATA transcription factor 9 [	0.946	0.960	0.590	1e-101
356522968	347	PREDICTED: GATA transcription factor 9-l	0.958	0.922	0.573	4e-99
356526093	347	PREDICTED: LOW QUALITY PROTEIN: GATA tra	0.946	0.910	0.591	6e-99
449447803	333	PREDICTED: GATA transcription factor 9-l	0.952	0.954	0.595	1e-95
357513427	342	GATA transcription factor [Medicago trun	0.943	0.921	0.587	2e-94
449530055	322	PREDICTED: GATA transcription factor 9-l	0.937	0.972	0.559	2e-89
297743213	283	unnamed protein product [Vitis vinifera]	0.808	0.954	0.604	2e-87
449465775	325	PREDICTED: GATA transcription factor 9-l	0.934	0.96	0.552	5e-87
225429918	342	PREDICTED: GATA transcription factor 9 [	0.949	0.926	0.523	1e-83

>gi|255549860|ref|XP_002515981.1| GATA transcription factor, putative [Ricinus communis] gi|223544886|gb|EEF46401.1| GATA transcription factor, putative [Ricinus communis]

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/344 (61%), Positives = 256/344 (74%), Gaps = 16/344 (4%)

Query: 1   METPEFYIGGYFN---AASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSNDDA---- 53
           ME PEF+IGGY++   A++   F  EKR+   +DQK G++F   V+DLLDF NDD     
Sbjct: 1   MEAPEFFIGGYYSGGAASTAAEFLPEKRM---SDQKNGDHF--AVDDLLDFPNDDDAAAA 55

Query: 54  -IMNDGGFFENVAANSTDSSTVTSNSAVSGGENNFPANFSGCRSSNSFADSQFCGELCVP 112
            +MNDG FF+N+ + +  ++T  S++  +  +++  +         SFADS F  ELCVP
Sbjct: 56  ALMNDG-FFDNITSKNCTTTTDNSSTTFTSNDSSNSSISGKHFGYQSFADSYFSSELCVP 114

Query: 113 YDDLAELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSLTPESSSSSTRLEPVSPK-ASNP 171
           YDDLAELEWLSNFVEDSFS +Q LQ ++   LSGSK  TP SSSS +  EP S +  +NP
Sbjct: 115 YDDLAELEWLSNFVEDSFSTEQNLQVNNFHILSGSKPPTPASSSSESHPEPSSARNPNNP 174

Query: 172 VFLPETPLPGKARSKRPRAAPCDWSTRLLHVS-PKGPSVERESPNPLMHTESGDSVRKCL 230
           +F PETPLPGKARSKR RAAPCDWSTRLLH+S P      ++  N  M++     VRKCL
Sbjct: 175 MFQPETPLPGKARSKRSRAAPCDWSTRLLHLSSPTTKVSSKKQGNVDMNSGMDAPVRKCL 234

Query: 231 HCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKVMEL 290
           HCA+EKTPQWRTGPMGPKTLCNACGVRYKSGRLV EYRPAASPTFVSAKHSNSHRKV+EL
Sbjct: 235 HCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVAEYRPAASPTFVSAKHSNSHRKVLEL 294

Query: 291 RRQKEMQRAPQQQFLGQRSIFGVSNGADDYLIHHPSGPDFRHMI 334
           RRQKE+QRA Q+Q+L Q SIFGV+NG DD+LIHH SGP+FRHMI
Sbjct: 295 RRQKELQRAQQEQYLHQSSIFGVTNGGDDFLIHHHSGPNFRHMI 338

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442507|ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/347 (59%), Positives = 248/347 (71%), Gaps = 31/347 (8%)

Query: 1   METPEFYIGGYFNAASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGF 60
           ME   F+ GGY++A + + FS EKR     +QKPG++F   VEDLLDF NDD IM DG F
Sbjct: 1   MEASSFFPGGYYSAGA-DEFSQEKR-----EQKPGDHF--LVEDLLDFPNDDDIMTDG-F 51

Query: 61  FENVAANSTDSSTVT----SNSAVSGGENNFPANFSGCRSSNSFADSQFCGELCVPYDDL 116
           F+ V  NSTDSSTVT     NS++SG E +F  +  GCR+   F D+QF GELCVP D+L
Sbjct: 52  FDTVTGNSTDSSTVTVVDSCNSSLSGNEPHFSGDV-GCRN---FTDAQFSGELCVPCDEL 107

Query: 117 AELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSLTPESSSSSTRLEPVSPKASNPVFLPE 176
           AELEWLSNFVE+SFS  + L K  ++ LSG K+    + S   + +P + + S P+  P 
Sbjct: 108 AELEWLSNFVEESFS-SEDLHK--IQVLSGIKAPLHTTESPEPQFQPETAR-SEPILQPP 163

Query: 177 TPLPGKARSKRPRAAPCDWSTRLLHVSPKGPSVERE---------SPNPLMHTESGDSVR 227
             +PGKARSKRPR+ PCDWSTRLL +SP   S E +         S     +++S    R
Sbjct: 164 MNVPGKARSKRPRSVPCDWSTRLLVLSPATSSSESDAFKKPPKTTSSKKKENSDSAGDGR 223

Query: 228 KCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKV 287
           KCLHCA+EKTPQWRTGPMGPKTLCNACGVR+KSGRLVPEYRPA+SPTFVSAKHSNSHRKV
Sbjct: 224 KCLHCAAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPASSPTFVSAKHSNSHRKV 283

Query: 288 MELRRQKEMQRAPQQQFLGQRSIFGVSNGADDYLIHHPSGPDFRHMI 334
           +ELRRQK++QR+   QFLGQ SIF  +NG DDYLIHH +GPDFRHMI
Sbjct: 284 LELRRQKDLQRSHHHQFLGQTSIFSATNG-DDYLIHHHAGPDFRHMI 329

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522968|ref|XP_003530114.1| PREDICTED: GATA transcription factor 9-like [Glycine max]

 Score =  367 bits (942), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 207/361 (57%), Positives = 244/361 (67%), Gaps = 41/361 (11%)

Query: 1   METPEFYIGGYFNAASTNNFSS-EKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGG 59
           ME PE+++G +F       F   EKR    +DQK GE F   ++DLLDFS+ DAIM+DG 
Sbjct: 1   MEVPEYFVGSFFGTGGAEQFCPPEKR---HSDQKTGEPF--AIDDLLDFSHADAIMSDG- 54

Query: 60  FFENVAANSTDSSTVTS----NSAVSGGENNF-----PANFSGCRSSNSFADSQFCGELC 110
           FF+NVA NSTDSSTVT+    NS++SG +N F     P  F         +D QF GELC
Sbjct: 55  FFDNVAGNSTDSSTVTAVDSCNSSISGSDNRFATTIVPRGFP--------SDPQFSGELC 106

Query: 111 VPYDDLAELEWLSNFVEDSFSMDQTLQKSDL-------EFLSGSKSLTPESSSSSTRLEP 163
           VPYD++AELEWLSNFVEDSFS ++ L+   L           G+K  TPESSSS+  L P
Sbjct: 107 VPYDEMAELEWLSNFVEDSFSAEEELKTLQLLSGAAAASTAIGAKPQTPESSSSTDTLPP 166

Query: 164 VSPKAS---NPVFLPETPLPGKARSKRPRAAPCDWSTRLLHV----SPKGPSVERESPNP 216
            +   +    P    ETPLPGKARSKR RAAP DWSTRLLH+      K P ++ E    
Sbjct: 167 FASDDTLRNAPFLHSETPLPGKARSKRSRAAPGDWSTRLLHLVATEQEKLPQLKAEPAKK 226

Query: 217 LMHTESGDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV 276
              T +  S RKCLHC +EKTPQWRTGPMGPKTLCNACGVR+KSGRLVPEYRPAASPTF+
Sbjct: 227 REGTNAECSGRKCLHCGTEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFM 286

Query: 277 SAKHSNSHRKVMELRRQKEMQRAPQQQFLGQRSIFGVSNGADDYLIHHPS---GPDFRHM 333
           S KHSNSHRKV+ELRRQKE+QR   QQ + Q SIFGVSNG D++LIHH     GPDFRH+
Sbjct: 287 STKHSNSHRKVLELRRQKELQRQQHQQLMSQSSIFGVSNGGDEFLIHHHHQHCGPDFRHV 346

Query: 334 I 334
           I
Sbjct: 347 I 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526093|ref|XP_003531654.1| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 9-like [Glycine max]

 Score =  367 bits (941), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 216/365 (59%), Positives = 252/365 (69%), Gaps = 49/365 (13%)

Query: 1   METPEFYIGGYFNAASTNNFS-SEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGG 59
           ME PE+++GGYF A     FS SEKR    +DQK GE F   ++DLLDFS+ DAIM+DG 
Sbjct: 1   MEAPEYFVGGYFGAGGAEQFSLSEKR---HSDQKTGEPF--AIDDLLDFSHADAIMSDG- 54

Query: 60  FFENVAANSTDSSTVTS----NSAVSGGENNFP-ANFSGCRSSNSFADSQFCGELCVPYD 114
           FF+NV  NSTDSSTVT+    NS++SG +N+F  A    C  S    D QF GELCVPYD
Sbjct: 55  FFDNVTGNSTDSSTVTAVDSCNSSISGSDNHFATAIVPRCYHS----DPQFSGELCVPYD 110

Query: 115 DLAELEWLSNFVEDSFSMDQTLQKSDLEFLSG---------SKSLTPESSSSSTRLEPVS 165
           ++AELEWLSNFVEDSFS ++ L+   L+ LSG         +K  TPESSSS+  L P +
Sbjct: 111 EMAELEWLSNFVEDSFSAEEELKT--LQLLSGGGAASTAIGAKPQTPESSSSTDTLPPFA 168

Query: 166 PKAS---NPVFLPETPLPGKARSKRPRAAPCDWSTRLLH-VSPKGPSVERESPNPLMHTE 221
            + +    P    ETP PGKARSKR RAAP DWSTRLLH V+P     E+E P P     
Sbjct: 169 SRRTLRNAPFLHSETPRPGKARSKRSRAAPGDWSTRLLHLVAP-----EKEKP-PQAKKR 222

Query: 222 SGDSV----RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVS 277
            G +V    RKCLHC +EKTPQWRTGPMGPKTLCNACGVR+KSGRLVPEYRPAASPTF+S
Sbjct: 223 EGTNVECSGRKCLHCGAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFMS 282

Query: 278 AKHSNSHRKVMELRRQKEMQRAP-QQQFLGQRSIFGVSNGADDYLIHHPS-------GPD 329
            KHSNSHRKV+ELRRQKEMQR    QQ + Q SIFGVSNG D++ IHH         GPD
Sbjct: 283 TKHSNSHRKVLELRRQKEMQRQQHHQQLMSQSSIFGVSNGGDEFSIHHHHHNHHLHCGPD 342

Query: 330 FRHMI 334
           FRH+I
Sbjct: 343 FRHVI 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447803|ref|XP_004141657.1| PREDICTED: GATA transcription factor 9-like [Cucumis sativus] gi|449480647|ref|XP_004155956.1| PREDICTED: GATA transcription factor 9-like [Cucumis sativus]

 Score =  356 bits (913), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 208/349 (59%), Positives = 248/349 (71%), Gaps = 31/349 (8%)

Query: 1   METPEFYIGGYFNAASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGF 60
           ME  +F IGGYF+      FS E  +  AAD       +FT++DLLDFSN+D IM DG  
Sbjct: 1   MEVNKFLIGGYFDGG-VGEFSPE--MTKAAD-------HFTIDDLLDFSNEDTIMTDG-L 49

Query: 61  FENVAANSTDSSTVTS----NSAVSGGENNFPANFSGCRSSNSFADSQFCGELCVPYDDL 116
           F+N+A +STDSST+T+    NS+VSGG+++   +F G   S SF +SQF G+LCVP DDL
Sbjct: 50  FDNMAGSSTDSSTITAVDSCNSSVSGGDHH---HFHGNIGSRSFDESQFSGDLCVPCDDL 106

Query: 117 AELEWLSNFVEDSFSMD-QTLQKSDLEFLSGSKSL----TPESSSSSTRLEPVSPKASNP 171
           AELEWLSNFVEDSFS + + LQ   L +LS S S     TPE+SSSS     +S  +++ 
Sbjct: 107 AELEWLSNFVEDSFSTEGKDLQV--LNYLSNSHSTSKPQTPETSSSSALPASLSIPSNSS 164

Query: 172 V----FLPETPLPGKARSKRPRAAPCDWSTRLLHV-SPKGPSVERESPNPLMHTESGDSV 226
                F  ETPLP KARSKR R APCDW+TRLLH+ SP  P   + S +      +GDS 
Sbjct: 165 NNSPRFPAETPLPCKARSKRSRTAPCDWTTRLLHLLSPADPKPPKSSSSKKKDASNGDSS 224

Query: 227 -RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHR 285
            RKCLHC +EKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF+SAKHSNSHR
Sbjct: 225 GRKCLHCQAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFISAKHSNSHR 284

Query: 286 KVMELRRQKEMQRAPQQQFLGQRSIFGVSNGADDYLIHHPSGPDFRHMI 334
           KV+ELRRQKE+  A QQQF+ Q +IFGV+NG D+YLI H  GP  RHMI
Sbjct: 285 KVLELRRQKELHIAQQQQFVNQGAIFGVTNGCDEYLISHHMGPSVRHMI 333

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357513427|ref|XP_003627002.1| GATA transcription factor [Medicago truncatula] gi|355521024|gb|AET01478.1| GATA transcription factor [Medicago truncatula]

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 212/361 (58%), Positives = 247/361 (68%), Gaps = 46/361 (12%)

Query: 1   METPEFYIGGYFNAASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGF 60
           ME  ++++GGY+ A   N FS EKR     DQKP     F ++DLLDFSN D IM+DG F
Sbjct: 1   MEAQDYFVGGYYGAGE-NQFSPEKR---HGDQKPPCE-PFAIDDLLDFSNADVIMSDGFF 55

Query: 61  FENVAANSTDSSTVTS----NSAVSGGENNF-----PANFSGCRSSNSFADSQFCGELCV 111
             NVA NSTDSS VT+    NS+ SGG+N F     P  FSG        D Q  GELCV
Sbjct: 56  DNNVAGNSTDSSNVTAVDSCNSSGSGGDNRFGGTIVPYGFSG--------DVQLTGELCV 107

Query: 112 PYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSL---TPESSSSSTRLEPVSPK- 167
           PYDD+AELEWLSNFVEDS+S ++ L+   L+ LSG+ ++   TPESSSS+  L   S   
Sbjct: 108 PYDDMAELEWLSNFVEDSYSAEEELKT--LQLLSGAGAVKPQTPESSSSTDTLPSFSTDE 165

Query: 168 -ASNPVFL-PETPLPGKARSKRPRAAPCDWSTRLLHVS---PKGPSVERESPNPLMHTES 222
            A N  FL PETPLPGKARSKR RAAP DWSTRLLH+    PK   + ++  +P +    
Sbjct: 166 TARNASFLRPETPLPGKARSKRSRAAPGDWSTRLLHLPDAPPKNYPIVKKREDPNVEC-- 223

Query: 223 GDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSN 282
             S RKCLHC ++KTPQWRTGPMGPKTLCNACGVR+KSGRLVPEYRPAASPTFVSAKHSN
Sbjct: 224 --SGRKCLHCGTDKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFVSAKHSN 281

Query: 283 SHRKVMELRRQKEMQR-------APQQQFLGQRSIFGV-SNGADDYL-IHHPSGPDFRHM 333
           SHRKV+ELRRQKEMQR          QQ L   SIFGV SNG DD++  HH  GP+FRH+
Sbjct: 282 SHRKVLELRRQKEMQRSSQHHHHHQHQQLLSHSSIFGVSSNGGDDFINYHHHCGPEFRHV 341

Query: 334 I 334
           I
Sbjct: 342 I 342

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530055|ref|XP_004172012.1| PREDICTED: GATA transcription factor 9-like [Cucumis sativus]

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 192/343 (55%), Positives = 225/343 (65%), Gaps = 30/343 (8%)

Query: 1   METPEFYIGGYFNAASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGF 60
           ME P + +GGY+   +   FS + +   A      E+F    E LLDFSN+D  M+ G F
Sbjct: 1   MELPGYLVGGYYGTGAPQ-FSPDNKKSTA------EHFPLD-EYLLDFSNEDVAMHSG-F 51

Query: 61  FENVAANSTDSSTVTS----NSAVSGGENNFPANFSGCRSSNSFADSQFCGELCVPYDDL 116
           F+NVA N +DSST+T+    NS+VSGG+N   A F     S SF ++QF  ELC+P DDL
Sbjct: 52  FDNVAGNCSDSSTLTAIDSCNSSVSGGDNQLLAKFE----SGSFCEAQFSSELCIPCDDL 107

Query: 117 AELEWLSNFVEDSFSMDQTLQK-SDLEFLSG--SKSLTPESSSSSTRLEPVSPKASNPVF 173
           AELEWLSNFVE+SFS ++  +    + FLSG  S + TPE+SSSS         A    F
Sbjct: 108 AELEWLSNFVEESFSTEEIDKDFPAIPFLSGGISSAATPETSSSSGATAFGYGNAKTTTF 167

Query: 174 L--PETPLPGKARSKRPRAAPCDWSTRLLHVSPKGPSVERESPNPLMHTESGDSVRKCLH 231
                  LPGKARSKR RA PCDWSTRLL  +        E     M      S RKCLH
Sbjct: 168 FHSEALTLPGKARSKRSRATPCDWSTRLLQATAP------EKTEGTMAKPETTSGRKCLH 221

Query: 232 CASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKVMELR 291
           CA+EKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPA+SPTFVS KHSNSHRKVMELR
Sbjct: 222 CAAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVSTKHSNSHRKVMELR 281

Query: 292 RQKEMQRAPQQQFLGQRSIFGVSNGADDYLIHHPSGPDFRHMI 334
           RQKEMQ   Q+QF+ Q SIF  SNG D+YLIH  +G DF HM+
Sbjct: 282 RQKEMQH--QEQFVSQSSIFSRSNGCDEYLIHRHNGGDFSHMM 322

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743213|emb|CBI36080.3| unnamed protein product [Vitis vinifera]

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 177/293 (60%), Positives = 212/293 (72%), Gaps = 23/293 (7%)

Query: 55  MNDGGFFENVAANSTDSSTVT----SNSAVSGGENNFPANFSGCRSSNSFADSQFCGELC 110
           M DG FF+ V  NSTDSSTVT     NS++SG E +F  +  GCR+   F D+QF GELC
Sbjct: 1   MTDG-FFDTVTGNSTDSSTVTVVDSCNSSLSGNEPHFSGDV-GCRN---FTDAQFSGELC 55

Query: 111 VPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSLTPESSSSSTRLEPVSPKASN 170
           VP D+LAELEWLSNFVE+SFS  + L K  ++ LSG K+    + S   + +P + + S 
Sbjct: 56  VPCDELAELEWLSNFVEESFS-SEDLHK--IQVLSGIKAPLHTTESPEPQFQPETAR-SE 111

Query: 171 PVFLPETPLPGKARSKRPRAAPCDWSTRLLHVSPKGPSVERE---------SPNPLMHTE 221
           P+  P   +PGKARSKRPR+ PCDWSTRLL +SP   S E +         S     +++
Sbjct: 112 PILQPPMNVPGKARSKRPRSVPCDWSTRLLVLSPATSSSESDAFKKPPKTTSSKKKENSD 171

Query: 222 SGDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHS 281
           S    RKCLHCA+EKTPQWRTGPMGPKTLCNACGVR+KSGRLVPEYRPA+SPTFVSAKHS
Sbjct: 172 SAGDGRKCLHCAAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPASSPTFVSAKHS 231

Query: 282 NSHRKVMELRRQKEMQRAPQQQFLGQRSIFGVSNGADDYLIHHPSGPDFRHMI 334
           NSHRKV+ELRRQK++QR+   QFLGQ SIF  +NG DDYLIHH +GPDFRHMI
Sbjct: 232 NSHRKVLELRRQKDLQRSHHHQFLGQTSIFSATNG-DDYLIHHHAGPDFRHMI 283

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465775|ref|XP_004150603.1| PREDICTED: GATA transcription factor 9-like [Cucumis sativus]

 Score =  327 bits (838), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 189/342 (55%), Positives = 223/342 (65%), Gaps = 30/342 (8%)

Query: 1   METPEFYIGGYFNAASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGF 60
           ME P + +GGY+   +   FS + +   A      E+F    E LLDFSN+D  M+ G F
Sbjct: 1   MELPGYLVGGYYGTGAPQ-FSPDNKKSTA------EHFPLD-EYLLDFSNEDVAMHSG-F 51

Query: 61  FENVAANSTDSSTVTS----NSAVSGGENNFPANFSGCRSSNSFADSQFCGELCVPYDDL 116
           F+NVA N +DSST+T+    NS+VSGG+N   A F     S SF ++QF  ELC+P DDL
Sbjct: 52  FDNVAGNCSDSSTLTAIDSCNSSVSGGDNQLLAKFE----SGSFCEAQFSSELCIPCDDL 107

Query: 117 AELEWLSNFVEDSFSMDQTLQK-SDLEFLSG--SKSLTPESSSSSTRLEPVSPKASNPVF 173
           AELEWLSNFVE+SFS ++  +    + FLSG  S + TPE+SSSS         A    F
Sbjct: 108 AELEWLSNFVEESFSTEEIDKDFPAIPFLSGGISSAATPETSSSSGATAFGYGNAKTTTF 167

Query: 174 L--PETPLPGKARSKRPRAAPCDWSTRLLHVSPKGPSVERESPNPLMHTESGDSVRKCLH 231
                  LPGKARSKR RA PCDWSTRLL  +        E     M      S RKCLH
Sbjct: 168 FHSEALTLPGKARSKRSRATPCDWSTRLLQATAP------EKTEGTMAKPETTSGRKCLH 221

Query: 232 CASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKVMELR 291
           CA+EKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPA+SPTFVS KHSNSHRKVMELR
Sbjct: 222 CAAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVSTKHSNSHRKVMELR 281

Query: 292 RQKEMQRAPQQQFLGQRSIFGVSNGADDYLIHHPSGPDFRHM 333
           RQKEMQ   Q+QF+ Q SIF  SNG D+YLIH  +G  F ++
Sbjct: 282 RQKEMQH--QEQFVSQSSIFSRSNGCDEYLIHRHNGGGFCYI 321

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429918|ref|XP_002283745.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera] gi|147811360|emb|CAN61228.1| hypothetical protein VITISV_004677 [Vitis vinifera]

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 188/359 (52%), Positives = 226/359 (62%), Gaps = 42/359 (11%)

Query: 1   METPEFYIGGYFNAASTNNFSSEKRVVVAADQKPGENFNFTVEDLLDFSNDDAIMNDGGF 60
           ME PEF+ GG F  A  + F +EKR+   +D KPG   +F +EDLLDFSNDDA++ DG F
Sbjct: 1   MEAPEFFQGG-FCIAPASQFGTEKRI---SDTKPGGGDHFIIEDLLDFSNDDAVITDGTF 56

Query: 61  FENVAANSTDSSTVT---SNSAVSGGENNFPANFSGCRSSNSFADSQFCGELCVPYDDLA 117
            + V   STDSST T   S ++VSG E      F+G   S ++ D+ F  +LCVPYDDLA
Sbjct: 57  -DTVTGTSTDSSTFTIVDSCNSVSGCE----PQFAGDIGSRNYTDAHFSSDLCVPYDDLA 111

Query: 118 ELEWLSNFVEDSFSMDQTLQKSDLEFLSGSKSLTPESSSSSTRLEPVSPKASNPVFLPET 177
           ELEWLSN VE+SFS  + L+K  L+ +SG K+ T E+S +        P+ +    L   
Sbjct: 112 ELEWLSNIVEESFS-SEDLEK--LQLISGMKANTEEASET----RDFQPENNQNPPLSLR 164

Query: 178 PLPGKARSKRPRAAPCDWSTRLLHVSPKGPSVERESPNPLMHTESGDSV----------- 226
             P KARSKR RA PC W++RLL +SP     E +   P    +S  S            
Sbjct: 165 DFPAKARSKRARAMPCKWTSRLLALSPTSSLSETDIIPPNSGKKSTKSAPKKKESPEVVA 224

Query: 227 ------RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKH 280
                 RKCLHCA++KTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV  KH
Sbjct: 225 GGCSDGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKH 284

Query: 281 SNSHRKVMELRRQKEMQRAPQQQFLGQRS-----IFGVSNGADDYLIHHPSGPDFRHMI 334
           SNSHRKV+ELRRQKEM R+  Q    Q       +F V NG DDYLIH   GPDFRH+I
Sbjct: 285 SNSHRKVLELRRQKEMVRSQHQHQQQQFLHHQNMVFDVPNG-DDYLIHQHLGPDFRHLI 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
TAIR|locus:2123738	308	GATA9 "GATA transcription fact	0.467	0.506	0.552	5.2e-59
TAIR|locus:2145259	331	GATA12 "GATA transcription fac	0.338	0.341	0.735	1.4e-58
TAIR|locus:2103346	240	GATA4 "GATA transcription fact	0.392	0.545	0.608	8.7e-49
TAIR|locus:2155056	339	GATA5 "GATA transcription fact	0.206	0.203	0.782	1.4e-40
TAIR|locus:2055589	264	GATA2 "GATA transcription fact	0.586	0.742	0.473	1.6e-40
TAIR|locus:2080828	312	GATA6 "GATA transcription fact	0.263	0.282	0.613	2.2e-36
TAIR|locus:2082637	322	BME3 "BLUE MICROPYLAR END 3" [	0.275	0.285	0.619	1.5e-33
TAIR|locus:2122214	238	GATA7 "GATA transcription fact	0.368	0.516	0.489	7.9e-33
TAIR|locus:2076191	274	GATA1 "GATA transcription fact	0.326	0.397	0.560	8.8e-32
TAIR|locus:2139594	269	GATA3 "GATA transcription fact	0.209	0.260	0.728	6.1e-31

TAIR|locus:2123738 GATA9 "GATA transcription factor 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 452 (164.2 bits), Expect = 5.2e-59, Sum P(3) = 5.2e-59
 Identities = 94/170 (55%), Positives = 119/170 (70%)

Query:   179 LPGKARSKRPRAAPCDWSTRLLHVS------PKGPS--VERESPNPLMHTESGDSV--RK 228
             +P KARSKR R+A   W++RLL ++      PK     V+ +     M  + G+S   R+
Sbjct:   139 VPAKARSKRSRSAASTWASRLLSLADSDETNPKKKQRRVKEQDFAGDMDVDCGESGGGRR 198

Query:   229 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKVM 288
             CLHCA+EKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPA+SPTFV A+HSNSHRKVM
Sbjct:   199 CLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVMARHSNSHRKVM 258

Query:   289 ELRRQKEMQRAPQ-QQFLGQRSIFGVSNGADDYLIHHPSG---PDFRHMI 334
             ELRRQKEM+      Q   +  +  + +  +D+L+H+ +    PDFRH+I
Sbjct:   259 ELRRQKEMRDEHLLSQLRCENLLMDIRSNGEDFLMHNNTNHVAPDFRHLI 308

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2145259 GATA12 "GATA transcription factor 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 454 (164.9 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
 Identities = 89/121 (73%), Positives = 97/121 (80%)

Query:   221 ESGDSV-RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAK 279
             ESG +  R+CLHCA++KTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFV AK
Sbjct:   212 ESGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAK 271

Query:   280 HSNSHRKVMELRRQKEMQRAPQQQFLGQRS------IFGVSNGADDYLIHHPSGPDFRHM 333
             HSNSHRKVMELRRQKEM RA   +F+          IF VS+  DDYLIHH  GPDFR +
Sbjct:   272 HSNSHRKVMELRRQKEMSRA-HHEFIHHHHGTDTAMIFDVSSDGDDYLIHHNVGPDFRQL 330

Query:   334 I 334
             I
Sbjct:   331 I 331

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2103346 GATA4 "GATA transcription factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 404 (147.3 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
 Identities = 84/138 (60%), Positives = 97/138 (70%)

Query:   169 SNPVFL---PETPLPGKARSKRPRA-APCDWSTRL-LHVSPKGPSVERESPNPLMHTES- 222
             +NP+ +   PE    GK RS+R RA AP    T   +  S    SV +  P  + + ES 
Sbjct:    93 ANPLTMTVRPEISFTGKPRSRRSRAPAPSVAGTWAPMSESELCHSVAKPKPKKVYNAESV 152

Query:   223 -GDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHS 281
               D  R+C HCASEKTPQWRTGP+GPKTLCNACGVRYKSGRLVPEYRPA+SPTFV  +HS
Sbjct:   153 TADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHS 212

Query:   282 NSHRKVMELRRQKEMQRA 299
             NSHRKVMELRRQKE Q +
Sbjct:   213 NSHRKVMELRRQKEQQES 230

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2155056 GATA5 "GATA transcription factor 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
 Identities = 54/69 (78%), Positives = 59/69 (85%)

Query:   227 RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRK 286
             RKC HC  +KTPQWR GPMG KTLCNACGVRYKSGRL+PEYRPA SPTF S  HSN HRK
Sbjct:   249 RKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRK 308

Query:   287 VMELRRQKE 295
             V+E+RR+KE
Sbjct:   309 VIEMRRKKE 317

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

TAIR|locus:2055589 GATA2 "GATA transcription factor 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 97/205 (47%), Positives = 120/205 (58%)

Query:    99 SFADSQ-FCGELCVPYDDLAELEWLSNFVEDSFSMDQTLQKSDLEFXXXXXXXXXXXXXX 157
             S AD   F  ++CVP DD A LEWLS FV+DSF+ D     + L                
Sbjct:    58 SSADHHSFLHDICVPSDDAAHLEWLSQFVDDSFA-D--FPANPL---GGTMTSVKTETSF 111

Query:   158 XXXXXXXXXKASNPVFLPETPLPGKARSKRPRAAPCDWSTRLLHVSPKGPSVERESPNPL 217
                      +A  P     +P+P ++  ++  +A   +  +       G    R   +  
Sbjct:   112 PGKPRSKRSRAPAPFAGTWSPMPLESEHQQLHSA-AKFKPKKEQSGGGGGGGGRHQSSSS 170

Query:   218 MHTESGDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVS 277
               TE G  +R+C HCASEKTPQWRTGP+GPKTLCNACGVR+KSGRLVPEYRPA+SPTFV 
Sbjct:   171 ETTEGG-GMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVL 229

Query:   278 AKHSNSHRKVMELRRQKEMQRAPQQ 302
              +HSNSHRKVMELRRQKE+ R PQQ
Sbjct:   230 TQHSNSHRKVMELRRQKEVMRQPQQ 254

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2080828 GATA6 "GATA transcription factor 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
 Identities = 54/88 (61%), Positives = 65/88 (73%)

Query:   220 TESGDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAK 279
             T++    R+C HC  +KTPQWR GP+G KTLCNACGVRYKSGRL+PEYRPA SPTF S  
Sbjct:   214 TQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSEL 273

Query:   280 HSNSHRKVMELRRQKEMQRAPQQQFLGQ 307
             HSN H KV+E+RR+KE     ++  L Q
Sbjct:   274 HSNHHSKVIEMRRKKETSDGAEETGLNQ 301

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2082637 BME3 "BLUE MICROPYLAR END 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
 Identities = 57/92 (61%), Positives = 66/92 (71%)

Query:   203 SPKGPSVERESPNPLMHTESGDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGR 262
             S  G  +E    N   ++     +RKC+HC   KTPQWR GPMGPKTLCNACGVRYKSGR
Sbjct:   205 SSSGIDLEVNGNNVDSYSSEQYPLRKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGR 264

Query:   263 LVPEYRPAASPTFVSAKHSNSHRKVMELRRQK 294
             L PEYRPAASPTF  A HSNSH+KV E+R ++
Sbjct:   265 LFPEYRPAASPTFTPALHSNSHKKVAEMRNKR 296

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009845 "seed germination" evidence=IMP

GO:0007623 "circadian rhythm" evidence=IEP

TAIR|locus:2122214 GATA7 "GATA transcription factor 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
 Identities = 67/137 (48%), Positives = 79/137 (57%)

Query:   170 NPVFLPETP---LPGKARSKRPRAAPCDWSTRLLHVSPK-GPSVERESPNPLMHTESG-- 223
             NPV   E     +P K RSKR R     WS      SP    +V R         ++   
Sbjct:    97 NPVASVEVRRQCVPVKPRSKRRRTNGRIWSME--SPSPLLSTAVARRKKRGRQKVDASYG 154

Query:   224 -----DSVRKCL-HCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVS 277
                    +R+C  HC  +KTPQWR GP+G KTLCNACGVR+KSGRL+PEYRPA SPTF +
Sbjct:   155 GVVQQQQLRRCCSHCGVQKTPQWRMGPLGAKTLCNACGVRFKSGRLLPEYRPACSPTFTN 214

Query:   278 AKHSNSHRKVMELRRQK 294
               HSNSHRKV+ELR  K
Sbjct:   215 EIHSNSHRKVLELRLMK 231

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2076191 GATA1 "GATA transcription factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 326 (119.8 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
 Identities = 65/116 (56%), Positives = 79/116 (68%)

Query:   180 PGKARSKRPRAAPCDWSTRLLHVSPKGPSVERESPNPLMHTESGDSV--RKCLHCASEKT 237
             P KARSKR R    D   R+L    +   ++++     M   +   +  RKC HC +EKT
Sbjct:   150 PAKARSKRRRTGRRD--LRVLWTGNEQGGIQKKKT---MTVAAAALIMGRKCQHCGAEKT 204

Query:   238 PQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRKVMELRRQ 293
             PQWR GP GPKTLCNACGVRYKSGRLVPEYRPA SPTF +  HSNSHRK++E+R+Q
Sbjct:   205 PQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRKIVEMRKQ 260

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP

TAIR|locus:2139594 GATA3 "GATA transcription factor 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 51/70 (72%), Positives = 59/70 (84%)

Query:   227 RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRK 286
             R+C HC +  TPQWRTGP+GPKTLCNACGVR+KSGRL PEYRPA SPTF +  HSN HRK
Sbjct:   180 RRCSHCGTNNTPQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPADSPTFSNEIHSNLHRK 239

Query:   287 VMELRRQKEM 296
             V+ELR+ KE+
Sbjct:   240 VLELRKSKEL 249

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P69781	GAT12_ARATH	No assigned EC number	0.4778	0.8263	0.8338	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	334
smart00401	52	smart00401, ZnF_GATA, zinc finger binding to DNA c	2e-14
pfam00320	36	pfam00320, GATA, GATA zinc finger	7e-13
cd00202	54	cd00202, ZnF_GATA, Zinc finger DNA binding domain;	7e-12

>gnl|CDD|214648 smart00401, ZnF_GATA, zinc finger binding to DNA consensus sequence [AT]GATA[AG]

 Score = 66.3 bits (162), Expect = 2e-14
 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 225 SVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVS 277
           S R C +C + +TP WR GP G KTLCNACG+ YK    +   RP +      
Sbjct: 2   SGRSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGGLK--RPLSLKKDGI 52

Length = 52

>gnl|CDD|109380 pfam00320, GATA, GATA zinc finger

 Score = 61.5 bits (150), Expect = 7e-13
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 229 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLV 264
           C +C + KTP WR GP G +TLCNACG+ Y+   L 
Sbjct: 1   CSNCGTTKTPLWRRGPDGNRTLCNACGLYYRKHGLK 36

This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. Length = 36

>gnl|CDD|238123 cd00202, ZnF_GATA, Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

 Score = 59.3 bits (144), Expect = 7e-12
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 228 KCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 275
            C +C +  TP WR GP G  TLCNACG+ +K        RP +    
Sbjct: 1   ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKKHG---VMRPLSKRKK 45

Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	334
cd00202	54	ZnF_GATA Zinc finger DNA binding domain; binds spe	99.49
smart00401	52	ZnF_GATA zinc finger binding to DNA consensus sequ	99.47
PF00320	36	GATA: GATA zinc finger; InterPro: IPR000679 Zinc f	99.4
KOG1601	340	consensus GATA-4/5/6 transcription factors [Transc	99.15
COG5641	498	GAT1 GATA Zn-finger-containing transcription facto	98.08
KOG3554	693	consensus Histone deacetylase complex, MTA1 compon	88.27

>cd00202 ZnF_GATA Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

Probab=99.49  E-value=1.7e-14  Score=107.41  Aligned_cols=44  Identities=43%  Similarity=0.950  Sum_probs=39.2

Q ss_pred             cccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCCCCCCCCCCCCCc
Q 019919          228 KCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPT  274 (334)
Q Consensus       228 ~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~grllp~~rPa~spt  274 (334)
                      .|+||++++||+||+||.|..+|||||||+|++.+   ..||...+.
T Consensus         1 ~C~~C~~~~Tp~WR~g~~~~~~LCNaCgl~~~k~~---~~rp~~~~~   44 (54)
T cd00202           1 ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKKHG---VMRPLSKRK   44 (54)
T ss_pred             CCCCCCCCCCcccccCCCCcchHHHHHHHHHHhcC---CCCCcccCc
Confidence            49999999999999999999999999999999866   567777665

>smart00401 ZnF_GATA zinc finger binding to DNA consensus sequence [AT]GATA[AG]

Probab=99.47  E-value=3.1e-14  Score=105.06  Aligned_cols=39  Identities=54%  Similarity=1.062  Sum_probs=35.7

Q ss_pred             CCccccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCCC
Q 019919          225 SVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL  263 (334)
Q Consensus       225 ~~~~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~grl  263 (334)
                      ..+.|+||+++.||+||+||.|+++|||||||+|++.+.
T Consensus         2 ~~~~C~~C~~~~T~~WR~g~~g~~~LCnaCgl~~~k~~~   40 (52)
T smart00401        2 SGRSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGG   40 (52)
T ss_pred             CCCCcCCCCCCCCCccccCCCCCCcEeecccHHHHHcCC
Confidence            357899999999999999999999999999999998654

>PF00320 GATA: GATA zinc finger; InterPro: IPR000679 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.40  E-value=4.1e-14  Score=97.29  Aligned_cols=35  Identities=54%  Similarity=1.174  Sum_probs=28.0

Q ss_pred             ccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCCC
Q 019919          229 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL  263 (334)
Q Consensus       229 C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~grl  263 (334)
                      |.||++++||+||+||.|..+||||||++|++.+.
T Consensus         1 C~~C~tt~t~~WR~~~~g~~~LCn~Cg~~~kk~~~   35 (36)
T PF00320_consen    1 CSNCGTTETPQWRRGPNGNRTLCNACGLYYKKYGK   35 (36)
T ss_dssp             -TTT--ST-SSEEEETTSEE-EEHHHHHHHHHHSS
T ss_pred             CcCCcCCCCchhhcCCCCCCHHHHHHHHHHHHhCC
Confidence            89999999999999999999999999999998653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents GATA-type zinc fingers (Znf). A number of transcription factors (including erythroid-specific transcription factor and nitrogen regulatory proteins), specifically bind the DNA sequence (A/T)GATA(A/G) [] in the regulatory regions of genes. They are consequently termed GATA-binding transcription factors. The interactions occur via highly-conserved Znf domains in which the zinc ion is coordinated by 4 cysteine residues [, ]. NMR studies have shown the core of the Znf to comprise 2 irregular anti-parallel beta-sheets and an alpha-helix, followed by a long loop to the C-terminal end of the finger. The N-terminal part, which includes the helix, is similar in structure, but not sequence, to the N-terminal zinc module of the glucocorticoid receptor DNA-binding domain. The helix and the loop connecting the 2 beta-sheets interact with the major groove of the DNA, while the C-terminal tail wraps around into the minor groove. It is this tail that is the essential determinant of specific binding. Interactions between the Znf and DNA are mainly hydrophobic, explaining the preponderance of thymines in the binding site; a large number of interactions with the phosphate backbone have also been observed []. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0008270 zinc ion binding, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 3GAT_A 2GAT_A 1GAU_A 1GAT_A 1Y0J_A 1GNF_A 2L6Z_A 2L6Y_A 3DFV_D 3DFX_B ....

>KOG1601 consensus GATA-4/5/6 transcription factors [Transcription]

Probab=99.15  E-value=2.7e-11  Score=105.00  Aligned_cols=71  Identities=59%  Similarity=1.160  Sum_probs=60.9

Q ss_pred             CccccCCCCCCCCCCCCCCCCCcccchhhhhhhhcC---CCCCCCCCCCCCc--------------cccccccc------
Q 019919          226 VRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSG---RLVPEYRPAASPT--------------FVSAKHSN------  282 (334)
Q Consensus       226 ~~~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~g---rllp~~rPa~spt--------------~~~~~hsn------  282 (334)
                      ...|.+|+++.||+||++|.|++.+|||||++|+++   +.++.++.+..++              +....|.+      
T Consensus       199 ~~~c~~~~~~~t~~~r~~~~g~~~~cnacgl~~k~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (340)
T KOG1601|consen  199 LRQCSNCGTTKTPLWRRGPEGPKSLCNACGLRYKKGGVRRPLPEKRPASSPRNVSPKGSGAVKGRTFTKSLHSNSAQLLL  278 (340)
T ss_pred             CcccCCCCCCCCcceecCCCCCccccccchhhhhhcCccccccccCccccccccCCCccccccCCCCCcccccchhhhhh
Confidence            589999999999999999999999999999999998   7888888877776              45555555      


Q ss_pred             -----------CchHHHHHHHHHHh
Q 019919          283 -----------SHRKVMELRRQKEM  296 (334)
Q Consensus       283 -----------sh~kv~~lrrqke~  296 (334)
                                 .+.++.+++|.++.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~r~~~~  303 (340)
T KOG1601|consen  279 APSKSEPPLLSSHQRVAEVRRYRES  303 (340)
T ss_pred             hhcccCccccccchHHHHHhhccCc
Confidence                       67888888887765

>COG5641 GAT1 GATA Zn-finger-containing transcription factor [Transcription]

Probab=98.08  E-value=1.5e-06  Score=89.38  Aligned_cols=53  Identities=32%  Similarity=0.585  Sum_probs=46.4

Q ss_pred             CccccCCCCCCCCCCCCCCCC----CcccchhhhhhhhcCCCCCCCC-CCCCCcccccccc
Q 019919          226 VRKCLHCASEKTPQWRTGPMG----PKTLCNACGVRYKSGRLVPEYR-PAASPTFVSAKHS  281 (334)
Q Consensus       226 ~~~C~~C~~~~TP~WR~GP~G----~ktLCNACGlryk~grllp~~r-Pa~spt~~~~~hs  281 (334)
                      ...|.+|.+..||.|||+..+    .-.|||||||+|+   ++...| |...++.+++.|.
T Consensus       158 ~~vc~Nc~t~stPlwrR~~~~~s~~~n~lcnaCgl~~k---lhg~~r~P~t~ks~~~ks~~  215 (498)
T COG5641         158 PHVCSNCKTTSTPLWRRASSESSLPGNNLCNACGLYLK---LHGSPRAPISLKSDSIKSRS  215 (498)
T ss_pred             cchhccccccCCccccccccccccCCcccccccccccc---ccCCcCCCcccccccccccc
Confidence            459999999999999999994    3799999999999   555667 9999999998886

>KOG3554 consensus Histone deacetylase complex, MTA1 component [Chromatin structure and dynamics]

Probab=88.27  E-value=0.43  Score=50.15  Aligned_cols=36  Identities=28%  Similarity=0.604  Sum_probs=31.2

Q ss_pred             CCccccCCCCCCCCCC--CCCCCCCcccchhhhhhhhc
Q 019919          225 SVRKCLHCASEKTPQW--RTGPMGPKTLCNACGVRYKS  260 (334)
Q Consensus       225 ~~~~C~~C~~~~TP~W--R~GP~G~ktLCNACGlryk~  260 (334)
                      +++.|.+|+++..-+|  +-+|.-.+.||-.|=++|||
T Consensus       385 ~g~~CEsC~ttqs~qWYsWGppnmqcrLCasCWiyWKK  422 (693)
T KOG3554|consen  385 DGRACESCYTTQSLQWYSWGPPNMQCRLCASCWIYWKK  422 (693)
T ss_pred             CCCcccccccccccceeccCCCCccchhhHHHHHHHHH
Confidence            4789999999999999  55565567899999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	334
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	1e-12
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	7e-11
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	3e-08
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	4e-07
3dfx_A	63	Trans-acting T-cell-specific transcription factor	1e-06

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans} Length = 71

 Score = 61.1 bits (148), Expect = 1e-12
 Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 225 SVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAA 271
              +C +C+  +T +WR         CNAC +  +      + RP  
Sbjct: 7   KSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQR---KYNKTRPVT 50

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A Length = 46

 Score = 55.9 bits (135), Expect = 7e-11
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 223 GDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYK 259
           G   R+C++C +  TP WR    G   LCNACG+ +K
Sbjct: 1   GSEARECVNCGATATPLWRRDRTG-HYLCNACGLYHK 36

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I* Length = 43

 Score = 48.2 bits (115), Expect = 3e-08
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 227 RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYK 259
             C +C ++ TP WR  P G + LCNACG+  K
Sbjct: 2   TTCTNCFTQTTPLWRRNPEG-QPLCNACGLFLK 33

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A* Length = 66

 Score = 45.8 bits (108), Expect = 4e-07
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 218 MHTESGDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAA 271
           M     +    C +C ++ TP WR  P G + LCNACG+  K   L    RP +
Sbjct: 1   MKNGEQNGPTTCTNCFTQTTPLWRRNPEG-QPLCNACGLFLK---LHGVVRPLS 50

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* Length = 63

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 220 TESGDSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYK 259
           + +  +   C +C +  T  WR    G   +CNACG+ YK
Sbjct: 1   SAARRAGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYK 39

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	334
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	99.59
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	99.58
3dfx_A	63	Trans-acting T-cell-specific transcription factor	99.56
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	99.55
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	99.45
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.37
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.1

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A

Probab=99.59  E-value=7.8e-16  Score=110.80  Aligned_cols=39  Identities=38%  Similarity=0.858  Sum_probs=35.4

Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCCC
Q 019919          224 DSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL  263 (334)
Q Consensus       224 g~~~~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~grl  263 (334)
                      .+.+.|.||++++||+||+||.|+ +|||||||+|++++.
T Consensus         2 ~~~~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k~~~~   40 (46)
T 1gnf_A            2 SEARECVNCGATATPLWRRDRTGH-YLCNACGLYHKMNGQ   40 (46)
T ss_dssp             CCSCCCTTTCCCCCSSCBCCTTCC-CBCSHHHHHHHHTCS
T ss_pred             CCCCCCCCcCCCCCCcCccCCCCC-ccchHHHHHHHHcCC
Confidence            356889999999999999999996 999999999998664

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*

Probab=99.58  E-value=5.4e-16  Score=110.19  Aligned_cols=36  Identities=42%  Similarity=0.947  Sum_probs=33.5

Q ss_pred             ccccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCCC
Q 019919          227 RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL  263 (334)
Q Consensus       227 ~~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~grl  263 (334)
                      +.|.+|++++||+||+||.|+ +|||||||+|++++.
T Consensus         2 ~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k~~~~   37 (43)
T 2vut_I            2 TTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLKLHGV   37 (43)
T ss_dssp             CCCSSSCCCCCSCCEECTTSC-EECHHHHHHHHHHSS
T ss_pred             CcCCccCCCCCCccccCCCCC-cccHHHHHHHHHhCC
Confidence            579999999999999999997 999999999998664

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*

Probab=99.56  E-value=9.1e-16  Score=116.95  Aligned_cols=50  Identities=30%  Similarity=0.624  Sum_probs=41.9

Q ss_pred             CCccccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCCCCCCCCCCCCCccccc
Q 019919          225 SVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSA  278 (334)
Q Consensus       225 ~~~~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~grllp~~rPa~spt~~~~  278 (334)
                      ....|.||+++.||+||+||.|+ +|||||||+|++++.   +||.......++
T Consensus         6 ~~~~C~~C~tt~Tp~WR~gp~G~-~LCNACGl~~~~~~~---~RP~~~~~~~i~   55 (63)
T 3dfx_A            6 AGTSCANCQTTTTTLWRRNANGD-PVCNACGLYYKLHNI---NRPLTMKKEGIQ   55 (63)
T ss_dssp             TTCCCTTTCCSCCSSCCCCTTSC-CCCHHHHHHHHHHSS---CCCGGGCCSSCC
T ss_pred             CCCcCCCcCCCCCCccCCCCCCC-chhhHHHHHHHHcCC---CCCcCcCCCccc
Confidence            45679999999999999999997 999999999998764   577766655543

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*

Probab=99.55  E-value=1e-15  Score=117.56  Aligned_cols=52  Identities=38%  Similarity=0.731  Sum_probs=43.7

Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCCCCCCCCCCCCCcccccc
Q 019919          224 DSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAK  279 (334)
Q Consensus       224 g~~~~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~grllp~~rPa~spt~~~~~  279 (334)
                      +....|.||++++||+||+||.|. +|||||||+|++.+.   .||....+.++++
T Consensus         7 ~~~~~C~~C~t~~Tp~WR~gp~G~-~LCNaCGl~~~~~~~---~RP~~~k~~~ik~   58 (66)
T 4gat_A            7 NGPTTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLKLHGV---VRPLSLKTDVIKK   58 (66)
T ss_dssp             SSSCCCTTTCCCCCSSCEEETTTE-EECHHHHHHHHHHCS---CCCGGGCCSCCCC
T ss_pred             CCCCCCCCCCCCCCCcCCcCCCCC-CccHHHHHHHHHcCC---CCchhhccccccc
Confidence            467899999999999999999996 999999999997553   4777777666543

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}

Probab=99.45  E-value=1.3e-14  Score=112.84  Aligned_cols=44  Identities=25%  Similarity=0.491  Sum_probs=34.6

Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCCCCCCCCCC
Q 019919          224 DSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPA  270 (334)
Q Consensus       224 g~~~~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~grllp~~rPa  270 (334)
                      +....|+||++++||+||+||.+..+|||||||+|++.+   ..||.
T Consensus         6 ~~~~~C~nC~tt~Tp~WRrg~~~~g~LCNACGl~~~~~~---~~RP~   49 (71)
T 2kae_A            6 KKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYN---KTRPV   49 (71)
T ss_dssp             --CCCCSSSCCSCCSSCCCCSSSSCCCSSHHHHHHHHHH---SCCCT
T ss_pred             CCCCcCCccCCCCCCccccCCCCCCccchHHHHHHHHhC---CCCCc
Confidence            467899999999999999965555599999999999754   34553

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.37  E-value=2.7e-13  Score=113.33  Aligned_cols=50  Identities=30%  Similarity=0.627  Sum_probs=42.1

Q ss_pred             CCccccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCCCCCCCCCCCCCccccc
Q 019919          225 SVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSA  278 (334)
Q Consensus       225 ~~~~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~grllp~~rPa~spt~~~~  278 (334)
                      ....|.||+++.||+||+||.| ++|||||||+|++++..   ||....+..+.
T Consensus        58 ~~~~C~~C~t~~tp~WRr~~~g-~~lCNaCgl~~~~~~~~---rp~~~~~~~i~  107 (115)
T 4hc9_A           58 AGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYKLHNIN---RPLTMKKEGIQ  107 (115)
T ss_dssp             TTCCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHHHSSC---CCGGGCCSSCC
T ss_pred             ccccCCCcCCCCcceeEECCCC-CCcchHHHHHHHHhCCC---CCccccccchh
Confidence            4578999999999999999999 89999999999986643   77766655543

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.10  E-value=2e-11  Score=102.08  Aligned_cols=37  Identities=41%  Similarity=0.895  Sum_probs=32.1

Q ss_pred             CCCccccCCCCCCCCCCCCCCCCCcccchhhhhhhhcC
Q 019919          224 DSVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSG  261 (334)
Q Consensus       224 g~~~~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~g  261 (334)
                      ...+.|.||+++.||+||+||.| .+|||||||+|+..
T Consensus         3 ~~~~~C~~Cg~~~Tp~WRr~~~g-~~lCnaCgl~~Kl~   39 (115)
T 4hc9_A            3 HMGRECVNCGATSTPLWRRDGTG-HYLCNACGLYHKMN   39 (115)
T ss_dssp             ---CCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHHH
T ss_pred             CCCCCCCCCCCccCCcceECCCC-CCcCcchhhhhhhc
Confidence            45789999999999999999999 79999999999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	334
d1y0ja1	39	g.39.1.1 (A:200-238) Erythroid transcription facto	1e-12
d2vuti1	42	g.39.1.1 (I:671-712) Erythroid transcription facto	9e-10
d3gata_	66	g.39.1.1 (A:) Erythroid transcription factor GATA-	2e-09

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 39

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.0 bits (143), Expect = 1e-12
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 227 RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYK 259
           R+C++C +  TP WR    G   LCNACG+ +K
Sbjct: 3   RECVNCGATATPLWRRDRTG-HYLCNACGLYHK 34

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]} Length = 42

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

 Score = 51.3 bits (123), Expect = 9e-10
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 229 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAA 271
           C +C ++ TP WR  P G + LCNACG+  K   L    RP +
Sbjct: 3   CTNCFTQTTPLWRRNPEG-QPLCNACGLFLK---LHGVVRPLS 41

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 66

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 50.8 bits (121), Expect = 2e-09
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 227 RKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSAKHSNSHRK 286
             C +C +  T  WR  PMG   +CNACG+ YK  ++    RP    T         +RK
Sbjct: 5   TVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKLHQV---NRP---LTMRKDGIQTRNRK 57

Query: 287 VMELRRQKE 295
           V    +++ 
Sbjct: 58  VSSKGKKRR 66

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	334
d1y0ja1	39	Erythroid transcription factor GATA-1 {Mouse (Mus	99.62
d2vuti1	42	Erythroid transcription factor GATA-1 {Emericella	99.61
d3gata_	66	Erythroid transcription factor GATA-1 {Chicken (Ga	99.47

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=4.4e-17  Score=112.29  Aligned_cols=37  Identities=41%  Similarity=0.929  Sum_probs=33.6

Q ss_pred             CCccccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCC
Q 019919          225 SVRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGR  262 (334)
Q Consensus       225 ~~~~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~gr  262 (334)
                      +.++|.||++++||+||+||.| ++|||||||+|+..+
T Consensus         1 e~r~C~~Cgtt~Tp~WR~gp~G-~~LCNACGl~~r~~G   37 (39)
T d1y0ja1           1 EARECVNCGATATPLWRRDRTG-HYLCNACGLYHKMNG   37 (39)
T ss_dssp             CCCCCSSSCCCCCSCCEECTTS-CEECSSHHHHHHHSC
T ss_pred             CcCCCCCCCCCCCcccccCCCC-CEeeHHhHHHHHHhC
Confidence            3578999999999999999999 699999999999653

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

Probab=99.61  E-value=6.3e-17  Score=113.07  Aligned_cols=40  Identities=43%  Similarity=0.925  Sum_probs=34.7

Q ss_pred             cccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCCCCCCCCCCC
Q 019919          228 KCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAA  271 (334)
Q Consensus       228 ~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~grllp~~rPa~  271 (334)
                      .|+||++++||+||+||.| ++||||||||||..   ...||++
T Consensus         2 ~C~nC~tt~Tp~WRr~~~G-~~lCNACGl~~k~~---g~~RP~s   41 (42)
T d2vuti1           2 TCTNCFTQTTPLWRRNPEG-QPLCNACGLFLKLH---GVVRPLS   41 (42)
T ss_dssp             CCSSSCCCCCSCCEECTTS-CEECHHHHHHHHHH---SSCCCCC
T ss_pred             cCCCCCCCCCccceeCCCC-CCchhhhhHHHHHc---CCCCCCC
Confidence            5999999999999999999 79999999999853   3456654

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.47  E-value=3.6e-15  Score=112.81  Aligned_cols=42  Identities=40%  Similarity=0.923  Sum_probs=35.6

Q ss_pred             CccccCCCCCCCCCCCCCCCCCcccchhhhhhhhcCCCCCCCCCCC
Q 019919          226 VRKCLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAA  271 (334)
Q Consensus       226 ~~~C~~C~~~~TP~WR~GP~G~ktLCNACGlryk~grllp~~rPa~  271 (334)
                      ...|.||+++.||+||+||.| ++|||||||||++.+.   .||..
T Consensus         4 g~~C~nCgt~~Tp~WRr~~~G-~~lCNACGl~~~~~~~---~RP~~   45 (66)
T d3gata_           4 GTVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKLHQV---NRPLT   45 (66)
T ss_dssp             TCCCTTTCCCCCSSEEECTTS-CEEEHHHHHHHHHHCS---CCCGG
T ss_pred             CCCCCCCCCCCCcccccCCCC-CcccchhHHHHHHhCC---cCCcc
Confidence            357999999999999999999 7999999999997543   45543