Citrus Sinensis ID: 019996

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330--
MSACACASVASALATAPSPTNGGFLYRSHPNSKKCIFTFNPFANSSSSSHHHHHHHHHHSPFTLRVTNDSTTSTELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTKVSSDSRCFCFCFCLTSNVIYIAFASVITLSITHSKHYELLLLLYETRLVLS
ccccHHHHHHHHHccccccccccccccccccccccEEEEccccccccccccccccccccccccCEEccccccccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccEECccccEEcccHHHHHHHHHHHcccccEEEEEEccccEEEEEEEEEccccccEEEccccEEEEEEcEEEEEcccccEEEEEECcccccccHHHHHHHcccHHHHHHHHccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccc
***********************FLYR*****KKCIFTF************************************************IVDGMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNL*************YPDPSGDPTKVSSDSRCFCFCFCLTSNVIYIAFASVITLSITHSKHYELLLLLYETRLVLS
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSACACASVASALATAPSPTNGGFLYRSHPNSKKCIFTFNPFANSSSSSHHHHHHHHHHSPFTLRVTNDSTTSTELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTKVSSDSRCFCFCFCLTSNVIYIAFASVITLSITHSKHYELLLLLYETRLVLS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfer were detected in SWISS-PROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3RGA, chain A
Confidence level:confident
Coverage over the Query: 112-253
View the alignment between query and template
View the model in PyMOL