Citrus Sinensis ID: 019996

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330--
Protein Sequence
MSACACASVASALATAPSPTNGGFLYRSHPNSKKCIFTFNPFANSSSSSHHHHHHHHHHSPFTLRVTNDSTTSTELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTKVSSDSRCFCFCFCLTSNVIYIAFASVITLSITHSKHYELLLLLYETRLVLS
Secondary Structure (PSIPRED)
ccccHHHHHHHHHccccccccccccccccccccccEEEEccccccccccccccccccccccccEEEccccccccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEccccEEccHHHHHHHHHHHHcccccEEEEEEccccEEEEEEEEEccccccEEEccccEEEEEEcEEEEEcccccEEEEEEEcccccccHHHHHHHcccHHHHHHHHccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHccccccccccEEccccccccEEEEEcccccccccccccccccccccccccEEEccccccccccccccccHHHHHccccccccccccEEEcccHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEccccccccHHHHHHccccEEEEEEccccEEEEEEEEEEcccccEEccccEEEEEEEEEEEEEEEccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MSACACASVASalatapsptnggflyrshpnskkciftfnpfanssssshhhhhhhhhhspftlrvtndsttstELSIQNQKSeadkivdgmdfgelcnefecissplvESTARQLVRDILELREGNRALGTFAVSvkykdptrsftgrekYKRRLWAttaldnpsvEMVMLSTSVLSIkwtlrgkpksiiANIGGDLIVKVYSKFTLnqisgqvieheelwdlsasspvARAFFWASRRLYATTEAGKDSFDLINNLKSKIsteqenlgiypdpsgdptkvssdsrcfcfcfcltSNVIYIAFASVITLSITHSKHYELLLLLYETRLVLS
Flexible Loop (DISEMBL)
MSACACASVAsalatapsptnGGFLYRSHPNSKKCIFTFNPFANSSSSSHHHHHHHHHHSPFTLRVTNDSTTSTELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELregnralgtfavsvkykdptrsftgrekykrrlwattaldnpsveMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATteagkdsfDLINNLKSKISTEQENLGIYPDPSGDPTKVSSDSRCFCFCFCLTSNVIYIAFASVITLSITHSKHYELLLLLYETRLVLS
Low Complexity Region (SEG)
MsacacasvasalatapsptNGGFLYRSHPNSKKCIFTFNPFANssssshhhhhhhhhhsPFTLRVTNDSTTSTELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTKVSSDSRcfcfcfcLTSNVIYIAFASVITLSITHSKHyelllllyeTRLVLS
Disordered region (IsUnstruct)
***********************FLYR*****KKCIFTF************************************************IVDGMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNL****************************RCFCFCFCLTSNVIYIAFASVITLSITHSKHYELLLLLYETRLV**
Disordered Region (DISOPRED)
*******************************************************************************************MDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYA****************************YPDPSGDPTKVSSDSRCFCFCFCLTSNVIYIAFASVITLSITHSKHYELLLLLYETRLVLS
Disordered Region (DISEMBL)
**********SALATAPSPTNGGFLYRSHPNSKKCIFTFNPFAN*******************LRVTNDSTTSTELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTKVSSDSRCFCFCFCLTSNVIYIAFASVITLSITHSKHYELLLLLYETRLVLS
Disordered Region (DISPRO)
*********************GGFLYRSHPNSKKCIFTFNPF*******************FTL******************SEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTKVSSDSRCFCFCFCLTSNVIYIAFASVITLSITHSKHYELLLLLYETRLVLS
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSACACASVASALATAPSPTNGGFLYRSHPNSKKCIFTFNPFANSSSSSHHHHHHHHHHSPFTLRVTNDSTTSTELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTKVSSDSRCFCFCFCLTSNVIYIAFASVITLSITHSKHYELLLLLYETRLVLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	332
297735250	346	unnamed protein product [Vitis vinifera]	0.665	0.638	0.791	1e-100
225430926	301	PREDICTED: uncharacterized protein LOC10	0.665	0.734	0.791	1e-100
255547550	312	conserved hypothetical protein [Ricinus	0.75	0.798	0.705	1e-100
147819671	298	hypothetical protein VITISV_020863 [Viti	0.647	0.721	0.799	3e-98
224128790	306	predicted protein [Populus trichocarpa]	0.743	0.807	0.706	3e-97
356568505	307	PREDICTED: uncharacterized protein LOC10	0.798	0.863	0.670	1e-91
255638033	307	unknown [Glycine max]	0.777	0.840	0.675	3e-91
449442645	305	PREDICTED: uncharacterized protein LOC10	0.861	0.937	0.564	3e-91
363807240	307	uncharacterized protein LOC100780920 pre	0.780	0.843	0.664	2e-89
388521943	309	unknown [Lotus japonicus]	0.680	0.731	0.712	1e-88

>gi|297735250|emb|CBI17612.3| unnamed protein product [Vitis vinifera]

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/225 (79%), Positives = 201/225 (89%), Gaps = 4/225 (1%)

Query: 61  PFTLRVTNDSTTST-ELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRD 119
           PF L+VTND    T E+SI++++SEADKIVDGMDFGELCNEFECISSPLVESTARQL RD
Sbjct: 89  PFPLKVTNDPNRRTAEVSIESERSEADKIVDGMDFGELCNEFECISSPLVESTARQLARD 148

Query: 120 ILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSV---EMVMLSTSV 176
           ILELREGNRALGTFAVSVKYKDP RSFTGREKYKRRLW T ALD+PSV   EMVMLSTSV
Sbjct: 149 ILELREGNRALGTFAVSVKYKDPVRSFTGREKYKRRLWVTDALDDPSVTVQEMVMLSTSV 208

Query: 177 LSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFW 236
           LSIKWT++GKPKS++A+IGGDLI++V S+FTLNQISGQVIEHEE WDLSASS +A+A+FW
Sbjct: 209 LSIKWTIKGKPKSLLASIGGDLIIRVNSQFTLNQISGQVIEHEEFWDLSASSAIAQAYFW 268

Query: 237 ASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTK 281
           ASRRL+A TEAGKD  D + N  S++STE+ENL IYPDPSGDPTK
Sbjct: 269 ASRRLFAATEAGKDFADSVKNWGSRLSTEKENLEIYPDPSGDPTK 313

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430926|ref|XP_002277168.1| PREDICTED: uncharacterized protein LOC100263239 [Vitis vinifera]

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/225 (79%), Positives = 201/225 (89%), Gaps = 4/225 (1%)

Query: 61  PFTLRVTNDSTTST-ELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRD 119
           PF L+VTND    T E+SI++++SEADKIVDGMDFGELCNEFECISSPLVESTARQL RD
Sbjct: 44  PFPLKVTNDPNRRTAEVSIESERSEADKIVDGMDFGELCNEFECISSPLVESTARQLARD 103

Query: 120 ILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSV---EMVMLSTSV 176
           ILELREGNRALGTFAVSVKYKDP RSFTGREKYKRRLW T ALD+PSV   EMVMLSTSV
Sbjct: 104 ILELREGNRALGTFAVSVKYKDPVRSFTGREKYKRRLWVTDALDDPSVTVQEMVMLSTSV 163

Query: 177 LSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFW 236
           LSIKWT++GKPKS++A+IGGDLI++V S+FTLNQISGQVIEHEE WDLSASS +A+A+FW
Sbjct: 164 LSIKWTIKGKPKSLLASIGGDLIIRVNSQFTLNQISGQVIEHEEFWDLSASSAIAQAYFW 223

Query: 237 ASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTK 281
           ASRRL+A TEAGKD  D + N  S++STE+ENL IYPDPSGDPTK
Sbjct: 224 ASRRLFAATEAGKDFADSVKNWGSRLSTEKENLEIYPDPSGDPTK 268

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547550|ref|XP_002514832.1| conserved hypothetical protein [Ricinus communis] gi|223545883|gb|EEF47386.1| conserved hypothetical protein [Ricinus communis]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/268 (70%), Positives = 213/268 (79%), Gaps = 19/268 (7%)

Query: 19  PTNGGFLYRSHPNSKKCIFTFNPFANSSSSSHHHHHHHHHHSPFTLRVTNDSTTSTELS- 77
           P  GG   RS P+  KCIFT   F  S+SS  +         PF LRVTNDS   TELS 
Sbjct: 26  PATGGLHRRSFPS--KCIFT--SFRPSTSSPRY---------PFLLRVTNDSN-RTELSS 71

Query: 78  -IQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVS 136
            +   +SEADKIVDGMDFGELCNEFECISSPLVE+TARQL RDILELREGNRALGTFAVS
Sbjct: 72  DVAVGRSEADKIVDGMDFGELCNEFECISSPLVEATARQLARDILELREGNRALGTFAVS 131

Query: 137 VKYKDPTRSFTGREKYKRRLWATTALDNPSV---EMVMLSTSVLSIKWTLRGKPKSIIAN 193
           V+YKDP RSFTGREKYKR LW T ALDNPSV   EMVMLSTSVLSIKWT++GKPKS +A+
Sbjct: 132 VRYKDPVRSFTGREKYKRPLWVTGALDNPSVAVQEMVMLSTSVLSIKWTIKGKPKSFLAS 191

Query: 194 IGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFD 253
            GG+LI+KV S+FTLNQISGQVIEHEE+WDLSASSP+A+AFFW SRRL+AT E GKD  D
Sbjct: 192 AGGELIIKVNSQFTLNQISGQVIEHEEVWDLSASSPIAQAFFWTSRRLFATLETGKDLSD 251

Query: 254 LINNLKSKISTEQENLGIYPDPSGDPTK 281
            + NL +++  E+ENL I+PDPSGDPTK
Sbjct: 252 FVKNLTTRLPAERENLEIFPDPSGDPTK 279

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147819671|emb|CAN76393.1| hypothetical protein VITISV_020863 [Vitis vinifera]

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 175/219 (79%), Positives = 196/219 (89%), Gaps = 4/219 (1%)

Query: 67  TNDSTTST-ELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELRE 125
           TNDS   T E+SI++++SEADKIVDGMDFGELCNEFECISSPLVESTARQL RDILELRE
Sbjct: 47  TNDSNRRTAEVSIESERSEADKIVDGMDFGELCNEFECISSPLVESTARQLARDILELRE 106

Query: 126 GNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSV---EMVMLSTSVLSIKWT 182
           GNRALGTFAVSVKYKDP RSFTGREKYKRRLW T ALD+PSV   EMVMLSTSVLSIKWT
Sbjct: 107 GNRALGTFAVSVKYKDPVRSFTGREKYKRRLWVTDALDDPSVTVQEMVMLSTSVLSIKWT 166

Query: 183 LRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLY 242
           ++GKPKS++A+IGGDLI++V S+FTLNQISGQVIEHEE WDLSASS +A+A+FWASRRL+
Sbjct: 167 IKGKPKSLLASIGGDLIIRVNSQFTLNQISGQVIEHEEFWDLSASSAIAQAYFWASRRLF 226

Query: 243 ATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTK 281
           A TEAGKD  D + N  S++STE ENL IYPDPSGDPTK
Sbjct: 227 AATEAGKDFADSVKNWGSRLSTEXENLEIYPDPSGDPTK 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128790|ref|XP_002328967.1| predicted protein [Populus trichocarpa] gi|222839201|gb|EEE77552.1| predicted protein [Populus trichocarpa]

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 188/266 (70%), Positives = 211/266 (79%), Gaps = 19/266 (7%)

Query: 22  GGFLYRSHPNSKKCIFTFNPFANSSSSSHHHHHHHHHHSPFTLRVTNDSTTSTELSIQ-- 79
           G F  +   +S + IFT  PF    +SS HH        PF LRVTNDS+  TELS    
Sbjct: 21  GSFHRQCCRSSNRFIFTCRPF----TSSLHH--------PFILRVTNDSS-RTELSPAEP 67

Query: 80  -NQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVK 138
            N+ SEAD+IV GMDFGELCNEFECISSPLVESTARQLVRDIL+LREGNRALGTFAVSV+
Sbjct: 68  ANESSEADRIVGGMDFGELCNEFECISSPLVESTARQLVRDILQLREGNRALGTFAVSVR 127

Query: 139 YKDPTRSFTGREKYKRRLWATTALDNPSV---EMVMLSTSVLSIKWTLRGKPKSIIANIG 195
           YKDP RSFTGREKYKR LWAT ALDNPSV   EM+MLSTS+LSIKWT+ GKPKS IA +G
Sbjct: 128 YKDPVRSFTGREKYKRPLWATGALDNPSVTVQEMIMLSTSILSIKWTITGKPKSFIAGVG 187

Query: 196 GDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLI 255
           GDLIVKV+SKFTLNQISGQVIEHEE WDLSASS V +AFFW SRRL+AT E GKD  DL+
Sbjct: 188 GDLIVKVHSKFTLNQISGQVIEHEEFWDLSASSVVDQAFFWTSRRLFATIENGKDLSDLV 247

Query: 256 NNLKSKISTEQENLGIYPDPSGDPTK 281
            +L ++ S++ EN+ IYPDPSGDPTK
Sbjct: 248 KSLTNRPSSKNENMEIYPDPSGDPTK 273

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568505|ref|XP_003552451.1| PREDICTED: uncharacterized protein LOC100791782 [Glycine max]

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 187/279 (67%), Positives = 209/279 (74%), Gaps = 14/279 (5%)

Query: 34  KCIFTFNPFANSSSSSHHHHHHHHHHSPFTLRVTND---STTSTELSIQNQKSEADKIVD 90
           KC  T   F +SS+      H HH+HS F LRV ND   S  S++ +I+   SEADK+VD
Sbjct: 26  KCT-TSKIFHSSSTCMPSFLHDHHYHS-FLLRVANDADRSEVSSDTAIKTSYSEADKMVD 83

Query: 91  GMDFGELCNEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGRE 150
           GMDFGELCNEFECISSPLVESTARQL RDILELREGNRALG FAVSV YKDP RSFTGRE
Sbjct: 84  GMDFGELCNEFECISSPLVESTARQLARDILELREGNRALGIFAVSVAYKDPIRSFTGRE 143

Query: 151 KYKRRLWATTALDNPSV---EMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFT 207
           KYKRRLWAT ALDNPSV   EMVMLSTSVLSIKWT+RGKPKS+   +GGDLI++V SKFT
Sbjct: 144 KYKRRLWATGALDNPSVTVQEMVMLSTSVLSIKWTIRGKPKSV---LGGDLIIRVTSKFT 200

Query: 208 LNQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNLKSKISTEQE 267
           LNQISGQVIEHEE WDLSASS  A+AFFW SR L+A  E+ KD  D   NL SK+ST++E
Sbjct: 201 LNQISGQVIEHEEFWDLSASSASAQAFFWTSRALFAAVESVKDLGDSAKNLSSKMSTKKE 260

Query: 268 NLGIYPDPSGDPTKVSSDSRCF---CFCFCLTSNVIYIA 303
           NL +YPDPSGDPTK       F    +   L   VIY+ 
Sbjct: 261 NLEMYPDPSGDPTKFFQRDDSFQQDAYQIALLLAVIYLV 299

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638033|gb|ACU19331.1| unknown [Glycine max]

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 183/271 (67%), Positives = 205/271 (75%), Gaps = 13/271 (4%)

Query: 42  FANSSSSSHHHHHHHHHHSPFTLRVTND---STTSTELSIQNQKSEADKIVDGMDFGELC 98
           F +SS+      H HH+HS F LRV ND   S  S++ +I+   SEADK+VDGMDFGELC
Sbjct: 33  FHSSSTCMPSFLHDHHYHS-FLLRVANDADRSEVSSDTAIKTSYSEADKMVDGMDFGELC 91

Query: 99  NEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWA 158
           NEFECISSPLVESTARQL RDILELREGNRALG FAVSV YKDP RSFTGREKYKRRLWA
Sbjct: 92  NEFECISSPLVESTARQLARDILELREGNRALGIFAVSVAYKDPIRSFTGREKYKRRLWA 151

Query: 159 TTALDNPSV---EMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQV 215
           T ALDNPSV   EMVMLSTSVLSIKWT+RGKPKS+   +GGDLI++V SKFT NQISGQV
Sbjct: 152 TGALDNPSVTVQEMVMLSTSVLSIKWTIRGKPKSV---LGGDLIIRVTSKFTFNQISGQV 208

Query: 216 IEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDP 275
           IEHEE WDLSASS  A+AFFW SR L+A  E+ KD  D   NL SK+ST++ENL +YPDP
Sbjct: 209 IEHEEFWDLSASSASAQAFFWTSRALFAAVESVKDLGDSAKNLSSKMSTKKENLEMYPDP 268

Query: 276 SGDPTKVSSDSRCF---CFCFCLTSNVIYIA 303
           SGDPTK       F    +   L   VIY+ 
Sbjct: 269 SGDPTKFFQRDDSFQQDAYQIALLLAVIYLV 299

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442645|ref|XP_004139091.1| PREDICTED: uncharacterized protein LOC101206988 [Cucumis sativus] gi|449476192|ref|XP_004154667.1| PREDICTED: uncharacterized protein LOC101230689 [Cucumis sativus]

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 175/310 (56%), Positives = 220/310 (70%), Gaps = 24/310 (7%)

Query: 1   MSACACASVASALATAPSPTNGGFLYRSHPNSKKCIFTFNPFANSSSSSHHHHHHHHHHS 60
           MS C    V+S     PSP     ++R     K       P A +   S   H       
Sbjct: 1   MSTC----VSSPSLAVPSPAAASTIFRR----KILRGATTPLAVTPPPSQSRHA------ 46

Query: 61  PFTLRVT-NDSTTSTELSIQN--QKSEADKIVDGMDFGELCNEFECISSPLVESTARQLV 117
            F LR   NDS ++ +L+ ++  ++SEADKIVDGMDFGELCNEFECISSPLVESTARQL 
Sbjct: 47  -FPLRAAANDSNSTEQLTAESAVERSEADKIVDGMDFGELCNEFECISSPLVESTARQLA 105

Query: 118 RDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSV---EMVMLST 174
           RDIL+LR+G+R+LG FAV VKYKDP R FTGREKYKR+LWAT+ALDNP+    EMVM+ST
Sbjct: 106 RDILQLRQGDRSLGNFAVFVKYKDPIRKFTGREKYKRQLWATSALDNPTTSVQEMVMMST 165

Query: 175 SVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAF 234
           S+L IKWT++GKPKS++A IGGDLI+KV S+FTLNQISGQVIEHEE WD+S+SS +++AF
Sbjct: 166 SILKIKWTIKGKPKSLVAAIGGDLIIKVDSQFTLNQISGQVIEHEESWDVSSSSAISQAF 225

Query: 235 FWASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTKVSSDSRCF---CF 291
           FWASR L+A+ EAGKD  D +++L  ++STE++NL ++PDPSGDPTK       F    +
Sbjct: 226 FWASRYLFASAEAGKDLGDSVSSLTGRVSTEKQNLEMFPDPSGDPTKFFQGEDNFQKDAY 285

Query: 292 CFCLTSNVIY 301
            F L   +IY
Sbjct: 286 QFALLLAIIY 295

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807240|ref|NP_001242357.1| uncharacterized protein LOC100780920 precursor [Glycine max] gi|255639967|gb|ACU20276.1| unknown [Glycine max]

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 180/271 (66%), Positives = 203/271 (74%), Gaps = 12/271 (4%)

Query: 42  FANSSSSSHHHHHHHHHHSPFTLRVTND---STTSTELSIQNQKSEADKIVDGMDFGELC 98
           F +SSS+      H HH+  F LRV ND   S  S++ + +   SEADK+VDGMDFGELC
Sbjct: 32  FFHSSSTCMPSSLHDHHYHSFLLRVANDADRSEMSSDTATEASYSEADKMVDGMDFGELC 91

Query: 99  NEFECISSPLVESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWA 158
           NEFECISSPLVESTARQL RDILELRE NRALG FAVSV YKDP RSFTGREKYKRRLWA
Sbjct: 92  NEFECISSPLVESTARQLARDILELREENRALGIFAVSVSYKDPIRSFTGREKYKRRLWA 151

Query: 159 TTALDNPSV---EMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQV 215
           T+ALDNPSV   EMVMLSTSVLSI+WT+RGKPKS+   +GGDLI++V SKFTLNQ SGQV
Sbjct: 152 TSALDNPSVTVQEMVMLSTSVLSIRWTIRGKPKSV---LGGDLILRVTSKFTLNQTSGQV 208

Query: 216 IEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDP 275
           IEHEE WDLSASS  A+AFFW SR L+A  E+ KD  D   NL SKIST++ENL +YPDP
Sbjct: 209 IEHEEFWDLSASSASAQAFFWTSRALFAAVESVKDLGDNAKNLSSKISTKKENLEMYPDP 268

Query: 276 SGDPTKVSSDSRCF---CFCFCLTSNVIYIA 303
           SGDPTK       F    +   L   VIY+ 
Sbjct: 269 SGDPTKFFQRDDSFQQDVYQIALLLAVIYLV 299

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521943|gb|AFK49033.1| unknown [Lotus japonicus]

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 166/233 (71%), Positives = 191/233 (81%), Gaps = 7/233 (3%)

Query: 55  HHHHHSPFTLRVTNDSTTS---TELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVES 111
           H HHHS F LRV ND+  +   ++ + +   S+ DKIVDG+DFGELCN+FECISSPLVES
Sbjct: 45  HQHHHS-FLLRVANDADRTELPSDAATETSYSDVDKIVDGLDFGELCNDFECISSPLVES 103

Query: 112 TARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSV---E 168
           TARQLVRDILELREGNRALGTFA SV+YKDP RSFTGR+KYKR LWAT+AL+NPSV   E
Sbjct: 104 TARQLVRDILELREGNRALGTFAFSVRYKDPIRSFTGRDKYKRSLWATSALENPSVTVQE 163

Query: 169 MVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASS 228
           MVMLSTSVLSIKWT++GKPKS IA +GGD+I+++ SKFTLNQISGQVIEHEE WDLSASS
Sbjct: 164 MVMLSTSVLSIKWTMKGKPKSFIARVGGDVILRITSKFTLNQISGQVIEHEEFWDLSASS 223

Query: 229 PVARAFFWASRRLYATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTK 281
             A AFFW SR L+AT E+ KD  D   N+ S   +E+ENL IYPDPSGDPTK
Sbjct: 224 ASAHAFFWTSRALFATVESVKDLGDSAKNMSSNFESEKENLEIYPDPSGDPTK 276

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	332
TAIR|locus:2200410	286	AT1G65230 "AT1G65230" [Arabido	0.641	0.744	0.672	4e-74

TAIR|locus:2200410 AT1G65230 "AT1G65230" [Arabidopsis thaliana (taxid:3702)]

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 148/220 (67%), Positives = 179/220 (81%)

Query:    65 RVTNDSTTSTELSIQNQKSEADKIVDGMDFGELCNEFECISSPLVESTARQLVRDILELR 124
             +V NDST  TE+SI   KSE DK+VD +DFGELCN+FEC SSP VESTARQLVRDILE+R
Sbjct:    38 QVMNDSTR-TEVSID--KSEVDKLVDKIDFGELCNDFECTSSPQVESTARQLVRDILEIR 94

Query:   125 EGNRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSV---EMVMLSTSVLSIKW 181
             EGNRA   +AVSVKYKDP RSFTGREKYKR +W T+ L+NP+V   EMVMLSTSVL IKW
Sbjct:    95 EGNRAFACYAVSVKYKDPVRSFTGREKYKRPMWITSGLENPTVTVQEMVMLSTSVLRIKW 154

Query:   182 TLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFFWASRRL 241
             T++GKPKSI+A + GDLIVKV S+FTLNQISGQV EHEE WDLS+SSP+A+A+FW SRRL
Sbjct:   155 TVKGKPKSILAAVSGDLIVKVKSEFTLNQISGQVFEHEESWDLSSSSPIAQAYFWTSRRL 214

Query:   242 YATTEAGKDSFDLINNLKSKISTEQENLGIYPDPSGDPTK 281
             +A +E+ KD  D+  +L + ++T +E+  IY DP+ DP K
Sbjct:   215 FAASESAKDVADVTKDLTANLTTRKEDTDIYRDPT-DPNK 253


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.131   0.375    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      332       281   0.00083  115 3  11 22  0.38    34
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  197 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.25u 0.20s 22.45t   Elapsed:  00:00:01
  Total cpu time:  22.25u 0.20s 22.45t   Elapsed:  00:00:01
  Start:  Fri May 10 19:23:59 2013   End:  Fri May 10 19:24:00 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019760 "glucosinolate metabolic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00870040 hypothetical protein (306 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	332
pfam10184	113	pfam10184, DUF2358, Uncharacterized conserved prot	9e-04

>gnl|CDD|220621 pfam10184, DUF2358, Uncharacterized conserved protein (DUF2358)

 Score = 38.0 bits (89), Expect = 9e-04
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 12/90 (13%)

Query: 137 VKYKDPTRSFTGREKYKRRLWATTALD-----NPSVEMVMLS---TSVLSIKWTLRGKPK 188
           V ++DP   F G ++YKR  W    L      +  +E+  ++      +  +WTL G P+
Sbjct: 28  VYFEDPLNKFRGIDRYKRNFWLIRFLGRLFFADIRLELHDITQTPEDTIKTRWTLSGIPR 87

Query: 189 SIIANIGGDLIVKVYSKFTLNQISGQVIEH 218
                    L     S + LN   G +  H
Sbjct: 88  ---LPWKPRLTFDGTSTYKLNS-DGLIYSH 113

DUF2358 is a family of conserved proteins found from plants to humans. The function is unknown. Length = 113

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	332
PF10184	113	DUF2358: Uncharacterized conserved protein (DUF235	99.94
cd00781	122	ketosteroid_isomerase ketosteroid isomerase: Many	99.05
TIGR02096	129	conserved hypothetical protein, steroid delta-isom	99.05
PF12680	102	SnoaL_2: SnoaL-like domain; PDB: 3F40_A 3RGA_A 3G8	98.85
PF07366	126	SnoaL: SnoaL-like polyketide cyclase; InterPro: IP	98.83
KOG4457	202	consensus Uncharacterized conserved protein [Funct	98.34
PF07858	125	LEH: Limonene-1,2-epoxide hydrolase catalytic doma	97.51
TIGR02960	324	SigX5 RNA polymerase sigma-70 factor, TIGR02960 fa	97.23
PRK08241	339	RNA polymerase factor sigma-70; Validated	97.06
cd00531	124	NTF2_like Nuclear transport factor 2 (NTF2-like) s	95.03
COG4319	137	Ketosteroid isomerase homolog [Function unknown]	93.82
PF13474	121	SnoaL_3: SnoaL-like domain; PDB: 2GXF_A 3KSP_A 3KE	93.75
TIGR02246	128	conserved hypothetical protein. This family consis	93.37

>PF10184 DUF2358: Uncharacterized conserved protein (DUF2358); InterPro: IPR018790 This entry represents a family of conserved proteins

Probab=99.94  E-value=4.6e-26  Score=187.05  Aligned_cols=104  Identities=27%  Similarity=0.493  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHHhCCccccccccceEeeCCcccccchHHHHHHH----HHhh-hcCCCeEEEE---EecCCEEEEEEE
Q 019996          111 STARQLVRDILELREGNRALGTFAVSVKYKDPTRSFTGREKYKRRL----WATT-ALDNPSVEMV---MLSTSVLSIKWT  182 (332)
Q Consensus       111 ~tirqL~~Di~~lregnrt~sIYApDV~FKDPFNsFrGrerYkri~----~M~~-~L~nPrfem~---m~s~dti~irWt  182 (332)
                      +++++|.+|++.+++|++.++||++||+|+||+++|+|+++|++++    ++.. ++.+|++++.   +..+++|++|||
T Consensus         2 ~~~~~Lr~D~~~~f~~~~~~~iY~~dv~F~Dp~~~f~g~~~Y~~~~~~l~~l~~~~~~~~~~~v~~i~~~~~~~I~~rW~   81 (113)
T PF10184_consen    2 DVIRTLREDLPRFFTGDLDYSIYDEDVVFIDPIVSFKGLDRYKRNLWALRFLGRLFFSDPSLEVLSIEQDGEDTIRARWR   81 (113)
T ss_pred             hHHHHHHHHHHHHhcCCCChhhcCCCeEEECCCCceecHHHHHHHHHHHHHHHhhccCCcEEEEEEEEECCCCEEEEEEE
Confidence            5789999999999999999999999999999999999999999994    4444 5667998554   344559999999


Q ss_pred             EeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEE
Q 019996          183 LRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEH  218 (332)
Q Consensus       183 Lsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsH  218 (332)
                      ++|.+++||   +|++.++|.|+|++|+ +|+|++|
T Consensus        82 ~~g~~~l~w---~p~~~~~G~S~~~ln~-~g~I~~H  113 (113)
T PF10184_consen   82 LRGVPRLPW---RPRISFDGTSTYTLNS-DGLIYRH  113 (113)
T ss_pred             EEEEeCCCc---CCcEEEEEEEEEEECC-CCcEEeC
Confidence            999999999   7799999999999999 9999999

The function is unknown.

>cd00781 ketosteroid_isomerase ketosteroid isomerase: Many biological reactions proceed by enzymatic cleavage of a C-H bond adjacent to carbonyl or a carboxyl group, leading to an enol or a enolate intermediate that is subsequently re-protonated at the same or an adjacent carbon

Probab=99.05  E-value=1.5e-09  Score=86.02  Aligned_cols=108  Identities=14%  Similarity=0.217  Sum_probs=79.2

Q ss_pred             HHHHHHHHHHHH-hCC--ccccccccceEeeCCccc--ccchHHHHHHH-HHhhhcCCCeE--EEEEecCCEEEEEEEEe
Q 019996          113 ARQLVRDILELR-EGN--RALGTFAVSVKYKDPTRS--FTGREKYKRRL-WATTALDNPSV--EMVMLSTSVLSIKWTLR  184 (332)
Q Consensus       113 irqL~~Di~~lr-egn--rt~sIYApDV~FKDPFNs--FrGrerYkri~-~M~~~L~nPrf--em~m~s~dti~irWtLs  184 (332)
                      ++++++.+.++. +||  ...++|++|+.|.||...  ++|++.+++.+ .+.......++  ......++.+-+.|+++
T Consensus         5 ~~~~v~~~~~a~~~~D~~~~~~l~aed~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   84 (122)
T cd00781           5 MKAAVQRYVEAVNAGDPEGIVALFADDATVEDPVGSPPRSGRAAIAAFYAQSLGGAKRLELTGPVRASHGGEAAFAFRVE   84 (122)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHcCCCeEEeCCCCCCCccCHHHHHHHHHHHhccCceEEecCceeeecCCEEEEEEEEE
Confidence            344444454443 333  578999999999999654  99999999998 65555444443  22334567777799887


Q ss_pred             eeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCC
Q 019996          185 GKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSAS  227 (332)
Q Consensus       185 g~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~  227 (332)
                      ....      ++.+.+.|.+-++||. +|||.++++|||....
T Consensus        85 ~~~~------g~~~~~~~~~v~~~~~-dGkI~~~~~y~d~~~~  120 (122)
T cd00781          85 FEWE------GQPCVVRVIDVMRFDA-DGRIVSMRAYWGPVNL  120 (122)
T ss_pred             EEeC------CceEEEEEEEEEEECC-CccChHHHHhcCcccc
Confidence            6533      5668899999999998 8999999999997643

Ketosteroid isomerases are important members of this class of enzymes which are the most proficient of all enzymes known and have served as a paradigm for enzymatic enolizations since its discovery in 1954. This CD includes members of this class that calalyze the isomerization of various beta,gamma-unsaturated isomers at nearly a diffusion-controlled rate. These enzymes are widely distributed in bacteria.

>TIGR02096 conserved hypothetical protein, steroid delta-isomerase-related

Probab=99.05  E-value=3.9e-09  Score=83.97  Aligned_cols=96  Identities=20%  Similarity=0.348  Sum_probs=77.4

Q ss_pred             ccccccccceEeeCCcc--cccchHHHHHHH-HHhhhcCCCeEEEEE--ec-CCEEEEEEEEeeeeCcccc---ccCCce
Q 019996          128 RALGTFAVSVKYKDPTR--SFTGREKYKRRL-WATTALDNPSVEMVM--LS-TSVLSIKWTLRGKPKSIIA---NIGGDL  198 (332)
Q Consensus       128 rt~sIYApDV~FKDPFN--sFrGrerYkri~-~M~~~L~nPrfem~m--~s-~dti~irWtLsg~lklPwA---~~ggrl  198 (332)
                      ...++|++|+.|.||..  ...|++.|++.+ .++..+.+.++++..  .. ++.+...|+++++.+-+|-   +.|.++
T Consensus        18 ~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~~~~~~~g~~~g~~~g~~~~g~~~   97 (129)
T TIGR02096        18 AVLALLAEDVLYDDNQGGRVLGGKAQLARFLAPYRTAFPDLLVDVVVCRNDEGVRVAAEWTVHGTYRTAFLGLPASGKTY   97 (129)
T ss_pred             HHHHhcCCCeEEEcCCCCcEeccHHHHHHHHHHHHHhCchhhceeEEEEecCCcEEEEEEEEeeeeccccCCCCCCCCEE
Confidence            58899999999999975  578899999998 888888888875543  23 3499999999998752221   125567


Q ss_pred             EEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          199 IVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       199 ~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      .++|.+.++|+  +|||++|++|||..
T Consensus        98 ~~~~~~~~~~~--~gkI~~~~~y~D~~  122 (129)
T TIGR02096        98 SIRGVTFFVFD--DGKIKRETTYYNLA  122 (129)
T ss_pred             EeeeeEEEEEe--CCEEEEEEEEecHH
Confidence            89999999997  59999999999965

This family of proteins about 135 amino acids in length largely restricted to the Proteobacteria. This family and a delta5-3-ketosteroid isomerase from Pseudomonas testosteroni appear homologous, especially toward their respective N-termini. Members, therefore, probably are enzymes.

>PF12680 SnoaL_2: SnoaL-like domain; PDB: 3F40_A 3RGA_A 3G8Z_A 3DMC_A 3FH1_A 1TUH_A 3F14_A 3ER7_A 1Z1S_A 3F7X_A

Probab=98.85  E-value=3.8e-08  Score=72.83  Aligned_cols=85  Identities=20%  Similarity=0.405  Sum_probs=71.4

Q ss_pred             ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEEEeeeeCccccccCCceEEeeee
Q 019996          128 RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYS  204 (332)
Q Consensus       128 rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWtLsg~lklPwA~~ggrl~I~G~S  204 (332)
                      ...++|++|+.|.||+...+|++.|+..+ .+.....+.++++.  ..+++.+.+.|+..++.+.    .+..+.+.|.+
T Consensus        15 ~i~~~~~~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~~~~~~~~~~~~----~g~~~~~~~~~   90 (102)
T PF12680_consen   15 AIAALFAPDAVFHDPGGTLRGREAIREFFEEFFESFPDIRFEIHDIFADGDRVVVEWTVTGTTPP----TGQPISFRGCS   90 (102)
T ss_dssp             HHHHTEEEEEEEEETTSEEESHHHHHHHHHHHHHHEEEEEEEEEEEEEETTEEEEEEEEEEEETT----TSCEEEEEEEE
T ss_pred             HHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEEEEEEcCCEEEEEEEEEEEEcC----CCCEEEEEEEE
Confidence            46789999999999988999999999998 77777777777553  4788999999999997442    25567899999


Q ss_pred             EEEEeCCCCcEEEE
Q 019996          205 KFTLNQISGQVIEH  218 (332)
Q Consensus       205 e~~LN~isGlVvsH  218 (332)
                      .+++ . +|||++|
T Consensus        91 ~~~~-~-dgkI~~~  102 (102)
T PF12680_consen   91 VFRF-E-DGKIVEH  102 (102)
T ss_dssp             EEEE-E-TTEEEEE
T ss_pred             EEEE-E-CCEEEEC
Confidence            9999 5 7999998

...

>PF07366 SnoaL: SnoaL-like polyketide cyclase; InterPro: IPR009959 This domain is found in SnoaL [] a polyketide cyclase involved in nogalamycin biosynthesis

Probab=98.83  E-value=1.1e-07  Score=76.41  Aligned_cols=96  Identities=21%  Similarity=0.330  Sum_probs=81.8

Q ss_pred             CccccccccceEeeCCc-ccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEEEeeeeCcccc---ccCCceE
Q 019996          127 NRALGTFAVSVKYKDPT-RSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWTLRGKPKSIIA---NIGGDLI  199 (332)
Q Consensus       127 nrt~sIYApDV~FKDPF-NsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWtLsg~lklPwA---~~ggrl~  199 (332)
                      +....+|+||+.+.+|. ..-.|++.|+..+ .+...+.+.++++.  ..+++.+.++|+++|+..-+|.   +.|.++.
T Consensus        17 ~~~~~~~~~d~~~~~~~~~~~~G~~~~~~~~~~~~~afPD~~~~i~~~~~~gd~v~~~~~~~Gth~g~~~g~~ptgk~v~   96 (126)
T PF07366_consen   17 DALDELVAPDVVFHDPGPGPPVGREGFKEFLKELRAAFPDLRFEIEDVVAEGDRVAVRWTFTGTHTGEFMGIPPTGKPVE   96 (126)
T ss_dssp             CHHHGTEEEEEEEEGCTTTEEEHHHHHHHHHHHHHHHSTTTEEEEEEEEEETTEEEEEEEEEEEESSEBTTBE-TTEEEE
T ss_pred             HHHHHhcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCEEEEEEEEEEeecCCcCCcCCCCCEEE
Confidence            35889999999999987 7999999999998 88889999999553  4678999999999999885542   2233577


Q ss_pred             EeeeeEEEEeCCCCcEEEEeeeccC
Q 019996          200 VKVYSKFTLNQISGQVIEHEELWDL  224 (332)
Q Consensus       200 I~G~Se~~LN~isGlVvsHiDyWD~  224 (332)
                      +.|++.++++.  |+|+++..+||.
T Consensus        97 ~~~~~~~~~~~--gkI~e~~~~~D~  119 (126)
T PF07366_consen   97 FRGMSIFRFED--GKIVEEWVYFDE  119 (126)
T ss_dssp             EEEEEEEEEET--TEEEEEEEEECH
T ss_pred             EEEEEEEEEEC--CEEEEEEEEECH
Confidence            99999999998  999999999995

This domain was formerly known as DUF1486. It adopts a distorted alpha-beta barrel fold []. Structural data together with site-directed mutagenesis experiments have shown that SnoaL has a different mechanism to that of the classical aldolase for catalysing intramolecular aldol condensation [].; PDB: 2GEY_C 3F9S_A 2GEX_A 3EHC_B 2F99_D 2F98_D 1SJW_A 3K0Z_B.

>KOG4457 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.34  E-value=2e-06  Score=78.47  Aligned_cols=110  Identities=17%  Similarity=0.279  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHHHhCCccccccccceEeeCCcccc--cchHHHHHHHHHhhhcCC---CeEEEEE------ecCCEE
Q 019996          109 VESTARQLVRDILELREGNRALGTFAVSVKYKDPTRSF--TGREKYKRRLWATTALDN---PSVEMVM------LSTSVL  177 (332)
Q Consensus       109 VE~tirqL~~Di~~lregnrt~sIYApDV~FKDPFNsF--rGrerYkri~~M~~~L~n---Prfem~m------~s~dti  177 (332)
                      .|-+-..|-..+|.+|-...-|++|++||.|.|-....  +|++-|...|-|.++|+.   +.+++.+      .++-++
T Consensus        35 L~~~yerLr~tlPklF~~~~DYS~Ys~dvvf~n~I~~v~t~G~~~y~~~~~~~rtlg~~~~ahv~~EvL~vt~h~d~~Tv  114 (202)
T KOG4457|consen   35 LEHVYERLRETLPKLFRRRMDYSFYSKDVVFDNQIFSVETRGIEQYMSHFGMIRTLGQVFLAHVEMEVLSVTPHIDEGTV  114 (202)
T ss_pred             HHHHHHHHHHHhHHHHhhcccceeecCCeEEeecccceeehhHHHHHHHHHHHHHHHHHhhhheeeEeEeecccCCCceE
Confidence            34556778889999999999999999999999987655  688888877766665554   4445444      467899


Q ss_pred             EEEEEEeeeeC--ccccccCC----ce---E-EeeeeEEEEeCCCCcEEEEe
Q 019996          178 SIKWTLRGKPK--SIIANIGG----DL---I-VKVYSKFTLNQISGQVIEHE  219 (332)
Q Consensus       178 ~irWtLsg~lk--lPwA~~gg----rl---~-I~G~Se~~LN~isGlVvsHi  219 (332)
                      .+|||+.|.+-  ..|+.-.-    ++   . .+|.|.+.+|. +|+|+.|+
T Consensus       115 r~RWRv~gvsv~~~f~~~~l~~~de~~~~~swyDgYSv~yl~~-~GlI~kh~  165 (202)
T KOG4457|consen  115 RCRWRVKGVSVTRIFMNPRLLRFDERMQNLSWYDGYSVLYLDG-NGLIYKHT  165 (202)
T ss_pred             EEEEEEecceEeeeeechHHhhHHHHhcccccccceeEEEECC-CceEEeee
Confidence            99999998542  44522111    11   1 78999999999 99999996

>PF07858 LEH: Limonene-1,2-epoxide hydrolase catalytic domain; InterPro: IPR013100 Epoxide hydrolases catalyse the hydrolysis of epoxides to corresponding diols, which is important in detoxification, synthesis of signal molecules, or metabolism

Probab=97.51  E-value=0.00066  Score=58.39  Aligned_cols=91  Identities=14%  Similarity=0.141  Sum_probs=59.6

Q ss_pred             cccccccc-eEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEEE-ecCCEEEEEEEEeeeeCccccccCC-ceEEeeee
Q 019996          129 ALGTFAVS-VKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMVM-LSTSVLSIKWTLRGKPKSIIANIGG-DLIVKVYS  204 (332)
Q Consensus       129 t~sIYApD-V~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~m-~s~dti~irWtLsg~lklPwA~~gg-rl~I~G~S  204 (332)
                      ...++++| ||..-|+-..+|+++.++.+ -|...+..-.++++. .+++.+.+.+|+--...    +.|| ++.+..+-
T Consensus        23 ~~~~~~~d~vy~Nvplp~i~G~~~~~~~l~~~~~~~~~~e~~i~~iaadg~~VltER~D~l~~----~dG~~~~~~~V~G   98 (125)
T PF07858_consen   23 LASLFDDDAVYHNVPLPPIRGRDAIRAFLRGFLDSLSGFEFDIHRIAADGDVVLTERTDVLRF----ADGPLRIQFPVCG   98 (125)
T ss_dssp             HHHCEECC-EEEETTTEEEESHHHHHHHHHCCHCCCEEEEEEEEEEEEETTEEEEEEEEEEEE----TTTTEEEEEEEEE
T ss_pred             HHHhcCCCcEEEeCCCCCcccHHHHHHHHHHHhcccceeEEEEEEEeecCCEEEEEeEeeeee----ecCCeEEEEEEEE
Confidence            45678999 99999999999999999998 443344444445543 44556667777765333    1122 23455555


Q ss_pred             EEEEeCCCCcEEEEeeeccCC
Q 019996          205 KFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       205 e~~LN~isGlVvsHiDyWD~S  225 (332)
                      .+++.  +|+|+..+||||..
T Consensus        99 vfEv~--dGkI~~WRDYFD~~  117 (125)
T PF07858_consen   99 VFEVR--DGKITLWRDYFDLA  117 (125)
T ss_dssp             EEEEE--TTEEEEEEEE--HH
T ss_pred             EEEEE--CCEEEEEeccCCHH
Confidence            55554  59999999999964

Limonene-1,2- epoxide hydrolase (LEH) differs from many other epoxide hydrolases in its structure and its novel one-step catalytic mechanism. Its main fold consists of a six-stranded mixed beta-sheet, with three N-terminal alpha helices packed to one side to create a pocket that extends into the protein core. A fourth helix lies in such a way that it acts as a rim to this pocket. Although mainly lined by hydrophobic residues, this pocket features a cluster of polar groups that lie at its deepest point and constitute the enzymes active site []. ; PDB: 2BNG_C 1NWW_A 1NU3_B.

>TIGR02960 SigX5 RNA polymerase sigma-70 factor, TIGR02960 family

Probab=97.23  E-value=0.0048  Score=57.48  Aligned_cols=126  Identities=10%  Similarity=0.082  Sum_probs=86.1

Q ss_pred             hcCCCccccCCceeeecchhHHHH---------------------------HHHHHHHHHHH-HhCC--ccccccccceE
Q 019996           89 VDGMDFGELCNEFECISSPLVEST---------------------------ARQLVRDILEL-REGN--RALGTFAVSVK  138 (332)
Q Consensus        89 vdg~~f~e~CdeF~C~SSp~VE~t---------------------------irqL~~Di~~l-regn--rt~sIYApDV~  138 (332)
                      ++||+..|++...- +|-..|.+.                           .+++.+...+. .+||  .+.+++++||.
T Consensus       156 ~~g~s~~EIA~~lg-is~~tV~~~l~Rar~~Lr~~l~~~~~~~~~~~~~~~~~~~v~~~~~a~~~gD~~~l~~Lla~Dv~  234 (324)
T TIGR02960       156 VLGWRAAETAELLG-TSTASVNSALQRARATLDEVGPSARDDQLAQPPSPEEQDLLERYIAAFESYDLDALTALLHEDAI  234 (324)
T ss_pred             HhCCCHHHHHHHHC-CCHHHHHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHhcCCeE
Confidence            78999888876543 232333332                           22333333333 4565  47889999999


Q ss_pred             eeCCc--ccccchHHHHHHH-HH--hhhcCCCeEEEEEecCCEEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCC
Q 019996          139 YKDPT--RSFTGREKYKRRL-WA--TTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISG  213 (332)
Q Consensus       139 FKDPF--NsFrGrerYkri~-~M--~~~L~nPrfem~m~s~dti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isG  213 (332)
                      |.+|.  ..++|++++...+ -+  ...+...++......++.+.+.|.....        ++.+.+.|...+++ . +|
T Consensus       235 ~~~p~~~~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~--------~~~~~~~~v~~~~~-~-dG  304 (324)
T TIGR02960       235 WEMPPYTLWYQGRPAIVGFIHTVCPGEGAAGMRLLPTIANGQPAAAMYMRRPD--------AERHTAFQLHVLEI-R-GG  304 (324)
T ss_pred             EEcCCCCcceeCHHHHHHHHHHhcccccCCceeEEEeeecCCceEEEEEEcCC--------CCeeeeeEEEEEEE-c-CC
Confidence            99997  4499999999887 44  3344444554445778888887742221        44578899999999 5 89


Q ss_pred             cEEEEeeeccCC
Q 019996          214 QVIEHEELWDLS  225 (332)
Q Consensus       214 lVvsHiDyWD~S  225 (332)
                      +|.+...|||-.
T Consensus       305 kI~~~~~~~~~~  316 (324)
T TIGR02960       305 RITHVTAFLDGP  316 (324)
T ss_pred             cEEEEEEEcCCH
Confidence            999999999965

This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family.

>PRK08241 RNA polymerase factor sigma-70; Validated

Probab=97.06  E-value=0.0061  Score=57.51  Aligned_cols=125  Identities=12%  Similarity=0.133  Sum_probs=82.0

Q ss_pred             hcCCCccccCCceeeecchhHH--------------------------HHHHHHHHHHHHH-HhCC--ccccccccceEe
Q 019996           89 VDGMDFGELCNEFECISSPLVE--------------------------STARQLVRDILEL-REGN--RALGTFAVSVKY  139 (332)
Q Consensus        89 vdg~~f~e~CdeF~C~SSp~VE--------------------------~tirqL~~Di~~l-regn--rt~sIYApDV~F  139 (332)
                      ++||+..|++...-+.- ..|.                          ...+++++....+ ..||  ...+++++||.+
T Consensus       167 ~~g~s~~EIA~~lgis~-~tVk~~l~RAr~~Lr~~~~~~~~~~~~~~~~~~~~~v~~~~~A~~~gD~~~l~~lla~Dv~~  245 (339)
T PRK08241        167 VLGWSAAEVAELLDTSV-AAVNSALQRARATLAERGPSAADTLREPDDPEERALLARYVAAFEAYDVDALVALLTEDATW  245 (339)
T ss_pred             hhCCCHHHHHHHhCCCH-HHHHHHHHHHHHHHhhcCCCcccccCCCCChHHHHHHHHHHHHHhcCCHHHHHHHhcCCEEE
Confidence            79999998886654321 1121                          2223333343333 5566  478899999999


Q ss_pred             eCCccc--ccchHHHHHHH-HHhhhc--CCCeEEEEEecCCEEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCc
Q 019996          140 KDPTRS--FTGREKYKRRL-WATTAL--DNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQ  214 (332)
Q Consensus       140 KDPFNs--FrGrerYkri~-~M~~~L--~nPrfem~m~s~dti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGl  214 (332)
                      .+|-..  ++|+++++..+ .+....  ..-++......++.+.+.+.-    +    ..|+.+.+.|..-+++.  +|+
T Consensus       246 ~~p~~~~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~----~----~~g~~~~~~~v~v~~v~--dGk  315 (339)
T PRK08241        246 SMPPFPLWYRGRDAIAAFLAGQCPGAGCGGSRLVPTRANGQPAFAQYMR----D----PDGGGHRPWALHVLELR--GGR  315 (339)
T ss_pred             EcCCCCCcccCHHHHHHHHHhhccccCCCceEEEEeecCCCeEEEEEEE----c----CCCCeeecceEEEEEEe--CCE
Confidence            999877  99999999888 543332  223333334556666664421    1    11444678899999997  599


Q ss_pred             EEEEeeeccC
Q 019996          215 VIEHEELWDL  224 (332)
Q Consensus       215 VvsHiDyWD~  224 (332)
                      |.+-.+|||.
T Consensus       316 I~~~~~y~d~  325 (339)
T PRK08241        316 IAHVTSFLDT  325 (339)
T ss_pred             EEEEEEEcCh
Confidence            9999999996

>cd00531 NTF2_like Nuclear transport factor 2 (NTF2-like) superfamily

Probab=95.03  E-value=0.5  Score=35.30  Aligned_cols=102  Identities=18%  Similarity=0.193  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHh-CC--ccccccccceEeeCCc-----ccccchHHHHHHH-HHhhhcCCCeE-------EEEEecC---
Q 019996          114 RQLVRDILELRE-GN--RALGTFAVSVKYKDPT-----RSFTGREKYKRRL-WATTALDNPSV-------EMVMLST---  174 (332)
Q Consensus       114 rqL~~Di~~lre-gn--rt~sIYApDV~FKDPF-----NsFrGrerYkri~-~M~~~L~nPrf-------em~m~s~---  174 (332)
                      ++|...+.++.. ++  .+..+|++|++|..|.     ..++|+++++..+ .+...  .+..       ++...++   
T Consensus         2 ~~l~~~y~~~ld~~~~~~l~~~~~~d~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~--~~~~~h~~~~~~~~~~~~~~~   79 (124)
T cd00531           2 EQFLYRYARLLDAGDREWLALLYADDAYFEPPGGDGLIYPDDGREAIEDRVRRLPFG--PSRTRHLVSNVDVQPGDDGEG   79 (124)
T ss_pred             HHHHHHHHHHhCCchHHHHHhhCcCcEEEEEccCCEEEEcCChHHHHHHHHHhcCCC--CCceEEEEEeEEEEeCCCCEE
Confidence            456666666654 33  4888999999999998     6889999999988 33221  1111       1122222   


Q ss_pred             CEEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCC--CCcEEEEeeecc
Q 019996          175 SVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQI--SGQVIEHEELWD  223 (332)
Q Consensus       175 dti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~i--sGlVvsHiDyWD  223 (332)
                      ..+...|.+.+...      +....+.|.-..++...  .++|.+.+.+|+
T Consensus        80 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~w~i~~~~~~~~  124 (124)
T cd00531          80 VVVSVFGVLRTRGD------GEQDVFAGGQTFVLRPQGGGGKIANRRFRLD  124 (124)
T ss_pred             EEEEEEEEEEEccC------CceeEEEEEEEEEEEEeCCEEEEEEEEEecC
Confidence            45666777776642      11233444444444321  679999988886

This family includes members of the NTF2 family, Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases, and the beta subunit of Ring hydroxylating dioxygenases. This family is a classic example of divergent evolution wherein the proteins have many common structural details but diverge greatly in their function. For example, nuclear transport factor 2 (NTF2) mediates the nuclear import of RanGDP and binds to both RanGDP and FxFG repeat-containing nucleoporins while Ketosteroid isomerases catalyze the isomerization of delta-5-3-ketosteroid to delta-4-3-ketosteroid, by intramolecular transfer of the C4-beta proton to the C6-beta position. While the function of the beta sub-unit of the Ring hydroxylating dioxygenases is not known, Scytalone Dehydratases catalyzes two reactions in the biosynthetic pathway that produces fungal melanin. Members of the NTF2-like superfamily are widely distributed among bacteria, archaea

>COG4319 Ketosteroid isomerase homolog [Function unknown]

Probab=93.82  E-value=0.89  Score=40.39  Aligned_cols=94  Identities=12%  Similarity=0.132  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHHHH-HhCC--ccccccccceEeeCCc-ccccchHHHHHHH--HHhhhcCCCeEEE---E-EecCCEEEE-
Q 019996          111 STARQLVRDILEL-REGN--RALGTFAVSVKYKDPT-RSFTGREKYKRRL--WATTALDNPSVEM---V-MLSTSVLSI-  179 (332)
Q Consensus       111 ~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPF-NsFrGrerYkri~--~M~~~L~nPrfem---~-m~s~dti~i-  179 (332)
                      ..||.+..|-..+ |.+|  ...+.|++|+.|=||. -.++|++.|++.+  ++..+-..+.|+.   + ..++|+++. 
T Consensus        10 ~~I~a~i~dw~~Av~a~D~~av~~~YtdDav~f~~~~~~~~Gk~~i~k~~~~~~~~~~~~~~f~~~el~v~~~GD~a~~~   89 (137)
T COG4319          10 DAIRAAIADWAAAVRAKDADAVADFYTDDAVVFPPPGLQRKGKAAIRKAFEGIFAMGIGPLKFTLEELQVHESGDVAFVT   89 (137)
T ss_pred             HHHHHHHHHHHHHHhcccHHHHHHhcCCceEEecCCCCcccCHHHHHHHHHHHHHhccCCCcceeeeeeeeccCCEEEEE
Confidence            5666777764433 4554  5778899999999996 8999999999999  4455555666633   2 257777655 


Q ss_pred             -EEEEeeeeCccccccCCc-eEEeeeeEEEEeC
Q 019996          180 -KWTLRGKPKSIIANIGGD-LIVKVYSKFTLNQ  210 (332)
Q Consensus       180 -rWtLsg~lklPwA~~ggr-l~I~G~Se~~LN~  210 (332)
                       .|.+.++-+      +|+ ....|.-++.|-.
T Consensus        90 ~~~~~~~~~~------dg~~~~~~~Rat~v~rK  116 (137)
T COG4319          90 ALLLLTGTKK------DGPPADLAGRATYVFRK  116 (137)
T ss_pred             EeeeeeccCC------CCcchhheeeeEEEEEE
Confidence             577777633      444 3366777777764

>PF13474 SnoaL_3: SnoaL-like domain; PDB: 2GXF_A 3KSP_A 3KE7_A 3BB9_E 3CNX_A 3F7S_A 3GWR_B

Probab=93.75  E-value=1.4  Score=33.95  Aligned_cols=74  Identities=19%  Similarity=0.278  Sum_probs=49.7

Q ss_pred             HHHHHHHHH-HhCC--ccccccccceEeeCC--cccccchHHHHHHH-HHhhhcCCCeEEE----EEecCCEEEEEEEEe
Q 019996          115 QLVRDILEL-REGN--RALGTFAVSVKYKDP--TRSFTGREKYKRRL-WATTALDNPSVEM----VMLSTSVLSIKWTLR  184 (332)
Q Consensus       115 qL~~Di~~l-regn--rt~sIYApDV~FKDP--FNsFrGrerYkri~-~M~~~L~nPrfem----~m~s~dti~irWtLs  184 (332)
                      ++.+++.+. .+||  .+.++|++|+.+-+|  -..++|++.+++.+ ..+..+....++.    .+..++.+.+.+.++
T Consensus         3 ~~~~~~~~a~~~~D~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~a~~~~~~~   82 (121)
T PF13474_consen    3 ALLEEWIEAFERGDIDALLSLFSDDFVFFGTGPGEIWRGREAIRAYFERDFESFRPISIEFEDVQVSVSGDVAVVTGEFR   82 (121)
T ss_dssp             HHHHHHHHHHHCT-HHHHHHHEEEEEEEEETTSSSEEESHHHHHHHHHHHHHTHSEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred             HHHHHHHHHHHhCCHHHHHHhhCCCEEEEcCCCCceECCHHHHHHHHHHHhhhCceEEEEEEEEEEEECCCEEEEEEEEE
Confidence            333333333 5566  689999999999874  45778999999998 4445554444422    235788888888877


Q ss_pred             eeeC
Q 019996          185 GKPK  188 (332)
Q Consensus       185 g~lk  188 (332)
                      ...+
T Consensus        83 ~~~~   86 (121)
T PF13474_consen   83 LRFR   86 (121)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            7654

>TIGR02246 conserved hypothetical protein

Probab=93.37  E-value=2.6  Score=33.05  Aligned_cols=76  Identities=14%  Similarity=0.124  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHHHH-HhCC--ccccccccceEeeC-CcccccchHHHHHHH-HHhhhcCCC---eE---EEEEecCCEEEE
Q 019996          111 STARQLVRDILEL-REGN--RALGTFAVSVKYKD-PTRSFTGREKYKRRL-WATTALDNP---SV---EMVMLSTSVLSI  179 (332)
Q Consensus       111 ~tirqL~~Di~~l-regn--rt~sIYApDV~FKD-PFNsFrGrerYkri~-~M~~~L~nP---rf---em~m~s~dti~i  179 (332)
                      +-|++|.....+. ..||  ...++|++|+.|.+ |-..++|++.++..+ ........+   ++   ++...+++.+..
T Consensus         4 ~~i~~l~~~~~~a~~~~D~~~~~~~~~~Da~~~~~~g~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~A~~   83 (128)
T TIGR02246         4 RAIRALVATWEAAWAAGDAEGFADLFTPDGVFVTVPGQVWKGREAIAAAHEAFLAGPYKGTRVTIDVIEVRFLGPDLAIV   83 (128)
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHhhCCCceEECCCCCeecCHHHHHHHHHHHhcccCCCcEEEeeeEEEEecCCCEEEE
Confidence            3456666666665 3444  58999999999984 455789999999988 333333322   22   222234466665


Q ss_pred             EEEEeee
Q 019996          180 KWTLRGK  186 (332)
Q Consensus       180 rWtLsg~  186 (332)
                      .+.....
T Consensus        84 ~~~~~~~   90 (128)
T TIGR02246        84 HAIQTIT   90 (128)
T ss_pred             EEEEEEE
Confidence            5444443

This family consists of uncharacterized proteins found in a number of genera and species, including Streptomyces, Xanthomonas, Oceanobacillus iheyensis, Caulobacter crescentus CB15, and Xylella fastidiosa. The function is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	332
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 58.3 bits (140), Expect = 2e-09
 Identities = 49/336 (14%), Positives = 90/336 (26%), Gaps = 114/336 (33%)

Query: 54  HHHHHHSPFTLRVTNDSTTSTELSIQNQK---SEADKIVDGMDFGE--------LCNEFE 102
           HHHHHH  F            E   Q +       D  VD  D  +        L  E E
Sbjct: 1   HHHHHHMDFET---------GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKE-E 50

Query: 103 C---ISSPLVESTARQLVRDILELREGNRALGTF--------------AVSVKYKDPTRS 145
               I S    S   +L    L L +    +  F               +  + + P+  
Sbjct: 51  IDHIIMSKDAVSGTLRLF-WTL-LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMM 108

Query: 146 FTGREKYKRRLWAT----TALDNPSVEMVM-LSTSVLSIK---W-TLRGKP---KSIIAN 193
                + + RL+         +   ++  + L  ++L ++      + G     K+    
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW--- 165

Query: 194 IGGDLIVKVYSKFTL-NQISGQVIEHEELWDLSASSPVARAFFWASRRLYATTEAGKDSF 252
               + + V   + +  ++  ++                   FW + +   + E      
Sbjct: 166 ----VALDVCLSYKVQCKMDFKI-------------------FWLNLKNCNSPE---TVL 199

Query: 253 DLINNLKSKISTEQENLGIYPDPSGDPTKVSSD-----SRCFC---FCFCL-------TS 297
           +++  L  +I     N     D S +             R      +  CL        +
Sbjct: 200 EMLQKLLYQID---PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256

Query: 298 NVIYIAF------------ASVIT-LSITHSKHYEL 320
                AF              V   LS   + H  L
Sbjct: 257 KAWN-AFNLSCKILLTTRFKQVTDFLSAATTTHISL 291

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 6e-05
 Identities = 51/383 (13%), Positives = 98/383 (25%), Gaps = 132/383 (34%)

Query: 24  FLYRSHPNS---------KKCIFTFNPFANSSSSSHHHHHHHHHHSPFTLRVTNDSTTST 74
              + + N           K     N F  S                  L  T     + 
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAW---NAFNLSCK---------------ILLTTRFKQVTD 279

Query: 75  ELSIQNQK-------------SEADKI---VDGMDFGELCNEFECISSPLVESTARQLVR 118
            LS                   E   +          +L  E    ++P   S   + +R
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE-VLTTNPRRLSIIAESIR 338

Query: 119 DILELREG------NRALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSVEMVML 172
           D L   +       ++       S+   +P        +Y++     +           +
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEP-------AEYRKMFDRLSVFP----PSAHI 387

Query: 173 STSVLSIKWT-------------------LRGKPKSIIANIGG---DLIVKVYSKFTLNQ 210
            T +LS+ W                    +  +PK    +I     +L VK+ +++ L++
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447

Query: 211 ISGQVIEH------EELWDLSASSPVARAFFW-ASRRLYATTEAGKDS------FDLINN 257
               +++H       +  DL     + + F+      L       + +       D    
Sbjct: 448 ---SIVDHYNIPKTFDSDDLIP-PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF-RF 502

Query: 258 LKSKISTEQENLGIYPDPSGDPTKVSSDSRCFCFCFCLTSNVIYIAFASVITLSIT-HSK 316
           L+ KI     +     + SG         +             Y  +       I  +  
Sbjct: 503 LEQKI----RHDSTAWNASGSILNTLQQLK------------FYKPY-------ICDNDP 539

Query: 317 HYELL-------LLLYETRLVLS 332
            YE L       L   E  L+ S
Sbjct: 540 KYERLVNAILDFLPKIEENLICS 562

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	332
3dxo_A	121	Uncharacterized snoal-like protein; putative isome	99.4
3rga_A	283	Epoxide hydrolase; NTF2-like, epoxide-opening cycl	99.34
2a15_A	139	Hypothetical protein RV0760C; beta-alpha-barrel, s	99.29
4h3u_A	158	Hypothetical protein; structural genomics, PSI-bio	99.27
3rga_A	283	Epoxide hydrolase; NTF2-like, epoxide-opening cycl	99.27
2gey_A	158	ACLR protein; alpha+beta barrel, oxidoreductase; H	99.2
2gex_A	152	SNOL; alpha+beta barrel, oxidoreductase; 2.50A {St	99.2
2f99_A	153	Aklanonic acid methyl ester cyclase, AKNH; anthrac	99.13
3f9s_A	146	Putative polyketide cyclase; structural genomics,	99.11
3kkg_A	146	Putative snoal-like polyketide cyclase; structural	99.09
1ohp_A	125	Steroid delta-isomerase; inhibitor; HET: ESR; 1.53	99.09
1oh0_A	131	Steroid delta-isomerase; ketosteroid isomerase, KS	99.07
1sjw_A	144	Nogalonic acid methyl ester cyclase; anthracycline	99.07
3ehc_A	128	Snoal-like polyketide cyclase; structural genomics	99.07
3k0z_A	159	Putative polyketide cyclase; structural genomics,	99.06
3fh1_A	129	Uncharacterized NTF2-like protein; structural geno	99.03
3mso_A	143	Steroid delta-isomerase; structural genomics, join	99.02
3ebt_A	132	Uncharacterized NTF2-like protein; structural geno	98.97
1z1s_A	163	Hypothetical protein PA3332; beta barrel, conserve	98.96
3i0y_A	140	Putative polyketide cyclase; cystatin-like fold, s	98.94
3fgy_A	135	Uncharacterized NTF2-like protein; structural geno	98.93
3hk4_A	136	MLR7391 protein; NTF2-like protein, structural gen	98.92
3f7x_A	151	Putative polyketide cyclase; structural genomics,	98.9
3ec9_A	140	Uncharacterized NTF2-like protein; structural geno	98.89
3g8z_A	148	Protein of unknown function with cystatin-like FO;	98.87
1s5a_A	150	Hypothetical protein YESE; structural genomics, PS	98.85
3dm8_A	143	Uncharacterized protein RPA4348; siras, putative i	98.83
3h3h_A	122	Uncharacterized snoal-like protein; structural gen	98.83
1nww_A	149	Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {R	98.76
3f8h_A	150	Putative polyketide cyclase; structural genomics,	98.76
3er7_A	131	Uncharacterized NTF2-like protein; YP_001812677.1,	98.7
3f8x_A	148	Putative delta-5-3-ketosteroid isomerase; structur	98.7
2k54_A	123	Protein ATU0742; protein of unknown function, stru	98.65
3g16_A	156	Uncharacterized protein with cystatin-like fold; Y	98.62
2bng_A	149	MB2760; epoxide hydrolase, limonene, hydrolase, st	98.58
3grd_A	134	Uncharacterized NTF2-superfamily protein; NP_97724	98.56
3jum_A	185	Phenazine biosynthesis protein A/B; chirality, dru	98.53
1tuh_A	156	BAL32A, hypothetical protein EGC068; unknown funct	98.49
3g0k_A	148	Putative membrane protein; snoal-like polyketide c	98.4
3dmc_A	134	NTF2-like protein; structural genomics, joint cent	98.34
3hx8_A	129	MLR2180 protein, putative ketosteroid isomerase; s	98.27
3ff0_A	163	Phenazine biosynthesis protein PHZB 2; cystatin-li	98.18
3en8_A	128	Uncharacterized NTF-2 like protein; YP_553245.1, N	98.08
3ff2_A	117	Uncharacterized cystatin fold protein (YP_497570.	98.02
3flj_A	155	Uncharacterized protein conserved in bacteria WIT	97.97
3f14_A	112	Uncharacterized NTF2-like protein; YP_680363.1, NT	97.76
3f40_A	114	Uncharacterized NTF2-like protein; YP_677363.1, NT	97.54
3h51_A	156	Putative calcium/calmodulin dependent protein KIN	97.29
3gzb_A	154	Putative snoal-like polyketide cyclase; YP_0011826	97.19
3d9r_A	135	Ketosteroid isomerase-like protein; YP_049581.1, s	97.17
3bb9_A	148	Putative orphan protein; structural genomics, join	96.94
3f7s_A	142	Uncharacterized NTF2-like protein; structural geno	96.82
2gxf_A	142	Hypothetical protein YYBH; alpha-beta protein., st	96.73
3ke7_A	134	Putative ketosteroid isomerase; structural genomic	96.69
3rob_A	139	Uncharacterized conserved protein; structural geno	96.56
3cu3_A	172	Domain of unknown function with A cystatin-like F;	95.77
2ux0_A	143	Calcium-calmodulin dependent protein kinase (CAM I	95.67
3gzr_A	146	Uncharacterized protein with A NTF2-like fold; str	94.64
3gwr_A	144	Putative calcium/calmodulin-dependent protein KIN	94.58
1tp6_A	128	Hypothetical protein PA1314; structural genomics,	93.64
2rfr_A	155	Uncharacterized protein; structural genomics, join	93.16
3b7c_A	122	Uncharacterized protein; NTF-2 like protein, struc	92.66
3ecf_A	130	NTF2-like protein; structural genomics, joint cent	92.33
3b8l_A	163	Uncharacterized protein; putative aromatic ring hy	91.86
2chc_A	170	Protein RV3472; hypothetical protein; 1.69A {Mycob	91.54
4i4k_A	143	Uncharacterized protein SGCJ; structural genomics,	90.56
2f86_B	143	Hypothetical protein K11E8.1D; UNC-43, oligomeriza	88.37
2r4i_A	123	Uncharacterized protein; NTF2-like protein, struct	88.31
3fsd_A	134	NTF2-like protein of unknown function in nutrient;	87.68
3a76_A	176	Gamma-hexachlorocyclohexane dehydrochlorinase; bar	86.97
2rgq_A	144	Domain of unknown function with A cystatin-like F;	84.74
3ef8_A	150	Putative scyalone dehydratase; YP_496742.1, struct	80.04

>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19

Probab=99.40  E-value=3.9e-12  Score=101.58  Aligned_cols=106  Identities=15%  Similarity=0.158  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHhC-C------ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEE---EecCCEEEEEE
Q 019996          113 ARQLVRDILELREG-N------RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMV---MLSTSVLSIKW  181 (332)
Q Consensus       113 irqL~~Di~~lreg-n------rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~---m~s~dti~irW  181 (332)
                      ++.+++.+.++.+. |      .+.++|++|+.|.||...++|++.+++++ .+..++.+.+++..   ...++.+..+|
T Consensus         5 ~~~~v~ry~~aw~~~d~~~~~~~l~~l~a~D~~~~dP~~~~~G~~ai~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~w   84 (121)
T 3dxo_A            5 HLTIAQTYLAAWNEEDNERRRHLVGQAWAENTRYVDPLMQGEGQQGIAAMIEAARQKFPGYRFVLAGTPDGHGNFTRFSW   84 (121)
T ss_dssp             HHHHHHHHHHHHHCSCHHHHHHHHHHHEEEEEEEECSSCEEEHHHHHHHHHHHHHHHSTTCEEEEEEEEEEETTEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCHHHHHHHHHHhcCCCeEEECCCCCcCCHHHHHHHHHHHHHHCCCcEEEEccCcceeCCEEEEEE
Confidence            45555666666443 3      47999999999999999999999999999 88899999999654   35788999999


Q ss_pred             EEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCC
Q 019996          182 TLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSAS  227 (332)
Q Consensus       182 tLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~  227 (332)
                      ++..  +      +|+..+.|.+.++||+ +|||.++..+||.-|+
T Consensus        85 ~~~~--~------~g~~~~~G~d~l~~~~-dGrI~~~~~f~d~~p~  121 (121)
T 3dxo_A           85 RLIS--P------DGDDVAGGTDVVSLNT-EGRIDNVVGFLDGAVS  121 (121)
T ss_dssp             EEEC--T------TSCEEEEEEEEEEECT-TSSEEEEEEEEEC---
T ss_pred             EEeC--C------CCCceeeEEEEEEECC-CCCEEEEEEecCCCCC
Confidence            9971  1      5667899999999998 8999999999998663

>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}

Probab=99.34  E-value=1.3e-11  Score=113.07  Aligned_cols=138  Identities=14%  Similarity=0.126  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHH-HhCC--ccccccccceEeeCCcc--cccchHHHHHHH-HHhhhcCCCeEEEEE--ecCCEEEEEEEE
Q 019996          112 TARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR--SFTGREKYKRRL-WATTALDNPSVEMVM--LSTSVLSIKWTL  183 (332)
Q Consensus       112 tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFN--sFrGrerYkri~-~M~~~L~nPrfem~m--~s~dti~irWtL  183 (332)
                      ..+++++...+. -.||  .+.++|++|+.|.||+.  .++|++.+++.+ .+...+...++....  .+++.+.++|++
T Consensus         7 ~~~~~v~~~~~~~~~~D~~~l~~l~a~Dav~~~P~~~~~~~Gr~ai~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~   86 (283)
T 3rga_A            7 VRKEVALEYCRRVNAGELEGVLQLFAPDARLVDPLGTEPVVGRAALAARLAPALRGAVHEEPGRPYAAHDGTSVVLPATV   86 (283)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECSSSSCCEESHHHHHHHHHHHHHTTCEEEECCCBCCSSSSEEEEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCCCcCcHHHHHHHHHHHHhhcCceEEEEEEeeeeCCEEEEEEEE
Confidence            344444444444 3455  58999999999999986  689999999999 788777554432222  678999999999


Q ss_pred             eeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC------CcHHHHHHHhhhhHHHHHhhhccchHH
Q 019996          184 RGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA------SSPVARAFFWASRRLYATTEAGKDSFD  253 (332)
Q Consensus       184 sg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~------~dv~aQaf~~~sR~~~a~~e~~kd~~d  253 (332)
                      ++..+..  +.|.++.++|++.++||+ +|||++|+||||.+.      ..+-.+.....-++.+++.+ ..|+..
T Consensus        87 ~~~~~g~--~~g~~v~~~gi~v~r~d~-dGkI~~~rdyw~~~d~~~~~~~~~~~~~~~~~v~~~~~a~~-~~D~~~  158 (283)
T 3rga_A           87 TVGAPGA--PPQRRGRTRVMGVIEVGE-DGLIREMRVMWGVTDSSWTARPAPDEERRKELAREHCLRIN-DGDVDG  158 (283)
T ss_dssp             EECSTTC--CGGGCEEEEEEEEEEECT-TSCEEEEEEECCGGGBTTCCCCCHHHHHHHHHHHHHHHHHH-TTCHHH
T ss_pred             EEEeCCC--CccceEEEEEEEEEEECC-CCcEEEEEEEECcccccccccCCCChHHHHHHHHHHHHHHH-cCCHHH
Confidence            9874411  012247899999999999 999999999999953      33445555555566666665 345443

>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A

Probab=99.29  E-value=5.2e-11  Score=94.16  Aligned_cols=107  Identities=17%  Similarity=0.167  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHH-HhCC--ccccccccceEeeCCccc---------ccchHHHHHHH-HHhhhcCCCeEEEE--E--ecCC
Q 019996          113 ARQLVRDILEL-REGN--RALGTFAVSVKYKDPTRS---------FTGREKYKRRL-WATTALDNPSVEMV--M--LSTS  175 (332)
Q Consensus       113 irqL~~Di~~l-regn--rt~sIYApDV~FKDPFNs---------FrGrerYkri~-~M~~~L~nPrfem~--m--~s~d  175 (332)
                      ++++++...+. -.||  ...++|++|+.|.||...         ++|++.+++.+ .+...+ +.++++.  .  .+++
T Consensus         9 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~v~~~p~~~~~~~~~g~~~~G~~ai~~~~~~~~~~~-~~~~~~~~~~i~~~g~   87 (139)
T 2a15_A            9 ALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAAN-RLTVTCEETFPSSSPD   87 (139)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHTEEEEEEEESSSSSBTTBTTSSCEESHHHHHHHHHHHTTTT-TCEEEEEEEEECSSTT
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHhcCCCEEEECCCCCCccCCCCceeecHHHHHHHHHHhcccc-eeEEeccCceEeecCC
Confidence            44444544444 3455  588999999999999865         89999999998 666666 7777543  3  6889


Q ss_pred             EEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC
Q 019996          176 VLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA  226 (332)
Q Consensus       176 ti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~  226 (332)
                      .+.++|++++..+    . |.++.++|...|++|. +|||++|++|||...
T Consensus        88 ~~~~~~~~~~~~~----~-G~~~~~~~~~~~~~~~-dGkI~~~~~y~d~~~  132 (139)
T 2a15_A           88 EIAHILVLHSEFD----G-GFTSEVRGVFTYRVNK-AGLITNMRGYWNLDM  132 (139)
T ss_dssp             EEEEEEEEEEEET----T-TEEEEEEEEEEEEECT-TSCEEEEEEECCGGG
T ss_pred             EEEEEEEEEEEeC----C-CCEEEEEEEEEEEECC-CCeEEEeehhcCHHH
Confidence            9999999997543    1 4456799999999998 999999999999654

>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}

Probab=99.27  E-value=4.4e-11  Score=98.03  Aligned_cols=111  Identities=18%  Similarity=0.200  Sum_probs=88.4

Q ss_pred             HHHHHHHHH-hCC--ccccccccceEeeCCcc--cccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEEEeeee
Q 019996          116 LVRDILELR-EGN--RALGTFAVSVKYKDPTR--SFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWTLRGKP  187 (332)
Q Consensus       116 L~~Di~~lr-egn--rt~sIYApDV~FKDPFN--sFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWtLsg~l  187 (332)
                      |++...++. .||  ...++|++|+.|.||..  .++|++.+++.+ .+...+.+.++++.  ..+++.+.++|+++++.
T Consensus        30 iv~~y~~A~n~~D~d~~~~l~a~D~v~~d~~~g~~~~Greai~~~~~~~~~~~~d~~~~v~~~~~~gd~v~~~~~~~gt~  109 (158)
T 4h3u_A           30 IVTAWAAAWTGTNPNALGTLFAADGTYVDHAIGATMTGREQISGWKARTDAMIENVHVTITKAYRAGDHVTIEAVYGGHI  109 (158)
T ss_dssp             HHHHHHHHHHSSCHHHHHTTEEEEEEEEETTTTEEEESHHHHHHHHHHHHHHEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             HHHHHHHHHHcCCHHHHHHHhcccceEeccCCCceEecchhhhhhhhhhhccCCccceeEeEEeecCceEEEEEEEEEEe
Confidence            445555553 344  57899999999999975  589999999998 88888888888654  36889999999999987


Q ss_pred             CccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHHH
Q 019996          188 KSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAF  234 (332)
Q Consensus       188 klPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQaf  234 (332)
                      +    +.|.++.++|.+.+++.  +|||++|+||||..  ..++|+-
T Consensus       110 ~----~tG~~~~~~~~~v~~~~--dGkI~~~~~y~D~~--~ll~QlG  148 (158)
T 4h3u_A          110 K----GAPTPFAVPMATLLRTR--GEEITSDQDYYSLS--SVLAQSG  148 (158)
T ss_dssp             T----TSSSCEEEEEEEEEEEE--TTEEEEEEEEECHH--HHHHHHT
T ss_pred             c----CccCcceeeeEEEEEEE--CCEEEEEEEEECHH--HHHHHcC
Confidence            7    32445789999999996  49999999999964  4566653

>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}

Probab=99.27  E-value=5.5e-11  Score=108.81  Aligned_cols=114  Identities=12%  Similarity=0.175  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHHHHh-CC--ccccccccceEeeCCcc--cccchHHHHHHH-HHhhhcCCCeEEE-E-E--ecCCEEEE
Q 019996          110 ESTARQLVRDILELRE-GN--RALGTFAVSVKYKDPTR--SFTGREKYKRRL-WATTALDNPSVEM-V-M--LSTSVLSI  179 (332)
Q Consensus       110 E~tirqL~~Di~~lre-gn--rt~sIYApDV~FKDPFN--sFrGrerYkri~-~M~~~L~nPrfem-~-m--~s~dti~i  179 (332)
                      ++.++++++...+... ||  .+.++|++|+.|.||+.  .++|++.+++.+ .+..+ .. .+.. . .  .+++.+.+
T Consensus       137 ~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~ai~~~~~~~~~~-~~-~~~~~~~~~~~~g~~aa~  214 (283)
T 3rga_A          137 EERRKELAREHCLRINDGDVDGLLKLYSPRIRFEDPVGSWTRTGLEALRAHATMAVGS-NV-RETAGLTVAGQDGRHAAV  214 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEESSTTSCEEESHHHHHHHHHHHHHT-TC-EEEEEEEEECTTSSEEEE
T ss_pred             hHHHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEECCCCCCcccCHHHHHHHHHHhhcc-Cc-EEEEeeEEecCCCCEEEE
Confidence            4556666666666543 44  49999999999999986  599999999999 88777 43 4422 2 2  56999999


Q ss_pred             EEEEeee---------------eCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC
Q 019996          180 KWTLRGK---------------PKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA  226 (332)
Q Consensus       180 rWtLsg~---------------lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~  226 (332)
                      +|++++.               ++.|-.+.|.++.++|.+.++||+ +|||++|+||||.+.
T Consensus       215 ~~~~~~~y~~~g~~~~~~g~~~~~~p~~~~G~~~~~~g~~~~~~~~-dGkI~~~r~yw~~~d  275 (283)
T 3rga_A          215 TVSATMDYLPSGPLLARHHLMTLPAPADPHRALIGIEYVMVIGVDA-DGLIDEMRAYWGATD  275 (283)
T ss_dssp             EEEEEEESTTHHHHHHHTTSCCSCCCSCTTTCEEEEEEEEEEEECT-TSCEEEEEEECCGGG
T ss_pred             EEEEEEEeecccccccccccccccCCcCCCCceEEEEEEEEEEECC-CccEEEEEEeeChhh
Confidence            9999997               111111114457899999999998 999999999999865

>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9

Probab=99.20  E-value=4.2e-10  Score=92.23  Aligned_cols=129  Identities=12%  Similarity=0.172  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHH-HhCC--ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEEE--ecCCEEEEEEEEeee
Q 019996          113 ARQLVRDILEL-REGN--RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMVM--LSTSVLSIKWTLRGK  186 (332)
Q Consensus       113 irqL~~Di~~l-regn--rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~m--~s~dti~irWtLsg~  186 (332)
                      .+++++...++ -.||  ...++|++|+.|.|| ..++|++.+++.+ .+...+.+.++++..  .+++.+.++|+++++
T Consensus         6 ~~~~v~~~~~a~~~~D~~~~~~~~a~D~v~~~p-~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~gd~v~~~~~~~gt   84 (158)
T 2gey_A            6 RKALCLEMVAAWNRWDLSGIIKHWSPDIVHYSE-DNEVSSADMVKLMEGGLKAFPDLQLEVKSIMAEEDRVALRITVTAT   84 (158)
T ss_dssp             HHHHHHHHHHHHHTTCTHHHHTTEEEEEEEEET-TEEECHHHHHHHHHHHHHHSTTCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHcCCCHHHHHHHcCCCeEEeCC-CCCCCHHHHHHHHHHHHHhCCCcEEEEEEEEEeCCEEEEEEEEEEE
Confidence            44555555554 3444  588999999999999 5789999999998 788888888886543  678999999999998


Q ss_pred             eCcccc---ccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH---------HHhhhhHHHHHhh
Q 019996          187 PKSIIA---NIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA---------FFWASRRLYATTE  246 (332)
Q Consensus       187 lklPwA---~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa---------f~~~sR~~~a~~e  246 (332)
                      ...+|.   +.|.++.++|.+.++++  +|||++|.+|||..  ..++|+         -...+|++|+|.|
T Consensus        85 ~~g~~~G~~~tG~~~~~~~~~~~~~~--dGkI~e~~~~~D~~--~~~~qlg~~p~~~~~~l~~~~~~~~~~~  152 (158)
T 2gey_A           85 HQGEFMGVQPTGQRVSWHLVEELRFV--DGKVVEHWDVINMR--PLLVRLGKLPDVPKVVLEASAKLAAALE  152 (158)
T ss_dssp             CCSCBTTBCCCCCEEEEEEEEEEEEE--TTEEEEEEEEEECH--HHHHHTTSSCCCCHHHHHHHHHHHHHHH
T ss_pred             ecCCCCCcCCCCCEEEEEEEEEEEEE--CCEEEEEEEecCHH--HHHHhcCCCCCCccCCCccHHHHHHHHh
Confidence            753322   11344679999999997  59999999999965  345553         2456788888766

>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9

Probab=99.20  E-value=3.9e-10  Score=91.34  Aligned_cols=117  Identities=13%  Similarity=0.212  Sum_probs=90.1

Q ss_pred             HHHHHHHHHH-HhCC--ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEEEeeee
Q 019996          114 RQLVRDILEL-REGN--RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWTLRGKP  187 (332)
Q Consensus       114 rqL~~Di~~l-regn--rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWtLsg~l  187 (332)
                      +++++...+. -.||  ...++|++|+.|.||-..++|++.+++.+ .+...+.+.++++.  ..+++.+.++|+++++.
T Consensus         7 ~~~v~~~~~a~~~~d~~~~~~~~a~D~v~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~gd~v~~~~~~~gt~   86 (152)
T 2gex_A            7 KERCLEMVAAWNRWDVSGVVAHWAPDVVHYDDEDKPVSAEEVVRRMNSAVEAFPDLRLDVRSIVGEGDRVMLRITCSATH   86 (152)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCEECHHHHHHHHHHHHHHCTTCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHcCCCeEEeCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEEEEEEeCCEEEEEEEEEEEe
Confidence            3444444443 3455  57899999999999878899999999998 88888888888654  36789999999999987


Q ss_pred             Cccccc---cCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH
Q 019996          188 KSIIAN---IGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA  233 (332)
Q Consensus       188 klPwA~---~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa  233 (332)
                      +.+|-+   .|.++.++|.+.+++++ +|||++|.+|||...  .++|+
T Consensus        87 ~g~~~G~~~tG~~~~~~~~~~~~~~d-~GkI~e~~~~~D~~~--~~~ql  132 (152)
T 2gex_A           87 QGVFMGIAPTGRKVRWTYLEELRFSE-AGKVVEHWDVFNFSP--LFRDL  132 (152)
T ss_dssp             CSCBTTBCCCCCEEEEEEEEEEEECT-TSCEEEEEEEEECHH--HHHHS
T ss_pred             cCCcCCcCCCCCEEEEEEEEEEEEec-CCEEEEEEEeccHHH--HHHHC
Confidence            533321   13446799999999987 799999999999654  45554

>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*

Probab=99.13  E-value=5.5e-10  Score=91.31  Aligned_cols=103  Identities=11%  Similarity=0.153  Sum_probs=83.2

Q ss_pred             CccccccccceEeeCCccc--ccchHHHHHHH-HHhhhcC-CCeEEEE--EecCCEEEEEEEEeeeeCcccc---ccCCc
Q 019996          127 NRALGTFAVSVKYKDPTRS--FTGREKYKRRL-WATTALD-NPSVEMV--MLSTSVLSIKWTLRGKPKSIIA---NIGGD  197 (332)
Q Consensus       127 nrt~sIYApDV~FKDPFNs--FrGrerYkri~-~M~~~L~-nPrfem~--m~s~dti~irWtLsg~lklPwA---~~ggr  197 (332)
                      +...++|++|+.|.||...  .+|++.+++.+ .+...+. +.++++.  ..+++.+.++|+++++..-+|-   +.|.+
T Consensus        30 ~~~~~~~a~D~v~~~p~~~~~~~G~~~~~~~~~~~~~~~p~d~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~  109 (153)
T 2f99_A           30 DDVADYIHPEYMNPGTLEFTSLRGPELFAINVAWVKKTFSEEARLEEVGIEERADWVRARLVLYGRHVGEMVGMAPTGRL  109 (153)
T ss_dssp             TTGGGTEEEEEECGGGTTTCCCCHHHHHHHHHHHHHHHHCTTCEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCE
T ss_pred             HHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHHHHCCCCcEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCE
Confidence            3688999999999999987  49999999998 8888888 8888654  3678999999999998653331   11445


Q ss_pred             eEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH
Q 019996          198 LIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA  233 (332)
Q Consensus       198 l~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa  233 (332)
                      +.+.|++.+++++  |||++|.||||...  .++|+
T Consensus       110 ~~~~~~~~~~v~d--GkI~e~~~~~D~~~--~~~ql  141 (153)
T 2f99_A          110 FSGEQIHLLHFVD--GKIHHHRDWPDYQG--TYRQL  141 (153)
T ss_dssp             EEEEEEEEEEEET--TEEEEEEEEECHHH--HHHHT
T ss_pred             EEEEEEEEEEEEC--CEEEEEEEecCHHH--HHHhc
Confidence            6799999999974  99999999999643  45554

>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}

Probab=99.11  E-value=7.9e-10  Score=88.52  Aligned_cols=117  Identities=15%  Similarity=0.214  Sum_probs=89.1

Q ss_pred             HHHHHHHHHH-HH-hCC--ccccccccceE-eeCCc----ccccchHHHHHHH-HHhhhcCCCeEEEEE--ecCCEEEEE
Q 019996          113 ARQLVRDILE-LR-EGN--RALGTFAVSVK-YKDPT----RSFTGREKYKRRL-WATTALDNPSVEMVM--LSTSVLSIK  180 (332)
Q Consensus       113 irqL~~Di~~-lr-egn--rt~sIYApDV~-FKDPF----NsFrGrerYkri~-~M~~~L~nPrfem~m--~s~dti~ir  180 (332)
                      .+++++...+ +. .||  ....+|++|+. +.+|.    -..+|++.+++.+ .+...+.+.++++..  .+++.+.++
T Consensus         8 ~~~~v~~~~~~~~~~~d~~~~~~~~a~d~~~~~~p~~~~~g~~~G~~~~~~~~~~~~~~~pd~~~~i~~~~~~gd~v~~~   87 (146)
T 3f9s_A            8 AKEILTQFTREVWSEGNIEASDKYIAPKYTVLHDPGDPWEGRELDVAGYKERVKTLRAAFPDQCFDIQGLFADGDAVVMT   87 (146)
T ss_dssp             HHHHHHHHHHHHTTTCCGGGHHHHEEEEEEEEECTTCTTTTCEECHHHHHHHHHHHHHHSTTCEEEEEEEEEETTEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHcCCCeeeccCCCCCCCCCcCCHHHHHHHHHHHHhhCCCcEEEEEEEEEeCCEEEEE
Confidence            4455555543 43 344  57889999999 99995    3689999999998 888889888886643  578999999


Q ss_pred             EEEeeeeCcccc---ccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH
Q 019996          181 WTLRGKPKSIIA---NIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA  233 (332)
Q Consensus       181 WtLsg~lklPwA---~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa  233 (332)
                      |+++++..-+|.   +.|.++.++|.+.++++  +|||++|.+|||...  .++|+
T Consensus        88 ~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~--dGkI~e~~~~~D~~~--~~~ql  139 (146)
T 3f9s_A           88 WLWTATHKEDIPGFPSTGKQIKMSGATVYYFD--GNRLTGHWQITDRLG--VYQQL  139 (146)
T ss_dssp             EEEEEECCSCBTTBCCCCCEEEEEEEEEEEEE--ETEEEEEEEEECHHH--HHHHH
T ss_pred             EEEEEEecCCCCCcCCCCCEEEEEEEEEEEEE--CCEEEEEEEEeCHHH--HHHHh
Confidence            999998764332   11334679999999997  599999999999654  55555

>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}

Probab=99.09  E-value=4.6e-10  Score=90.13  Aligned_cols=122  Identities=16%  Similarity=0.106  Sum_probs=93.4

Q ss_pred             hHHHHHHHHHHHHHH-HH-hCC----ccccccccceEee-CCcccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEE
Q 019996          108 LVESTARQLVRDILE-LR-EGN----RALGTFAVSVKYK-DPTRSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVL  177 (332)
Q Consensus       108 ~VE~tirqL~~Di~~-lr-egn----rt~sIYApDV~FK-DPFNsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti  177 (332)
                      ..++.-+++++...+ +. .||    ....+|++|+.|. .|....+|++.+++.+ .+...+.+.++++.  ..+++.+
T Consensus         6 ~~~~~n~~~v~~~~~~~~~~~d~~~~~~~~~~a~d~~~~~~~~~~~~G~~~~~~~~~~~~~~~pd~~~~i~~~~~~gd~v   85 (146)
T 3kkg_A            6 PIETQNVETVLRLFDEGWGAQDGWRDVWRETMTPGFRSIFHSNQAVEGIEQAIAFNAVLFEGFPRLEVVVENVTVEGDNV   85 (146)
T ss_dssp             SCC-CHHHHHHGGGTTTSTTSTTHHHHHHHHEEEEEEEEETTSCCEESHHHHHHHHHHHHHHSTTCEEEEEEEEEETTEE
T ss_pred             chhHHHHHHHHHHHHHHHcCCCcHHHHHHHHcCCCeEEecCCCCCCCCHHHHHHHHHHHHHhCCCceeEEEEEEEeCCEE
Confidence            345556777777766 43 444    4678999999999 5667899999999998 88888988888653  3678999


Q ss_pred             EEEEEEeeeeCcccc---ccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH
Q 019996          178 SIKWTLRGKPKSIIA---NIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA  233 (332)
Q Consensus       178 ~irWtLsg~lklPwA---~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa  233 (332)
                      .++|+++++..-+|-   +.|.++.+.|++.+++.  +|||++|.+|||..  ..++|+
T Consensus        86 ~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~~--dGkI~e~~~~~D~~--~l~~Ql  140 (146)
T 3kkg_A           86 VVQARLTGAQDGPFLGVPPSGQMVDVPDVTLFTLA--DGQVIEMRYFTDLL--AVMTAI  140 (146)
T ss_dssp             EEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEEE--TTEEEEEEEEECHH--HHHHHH
T ss_pred             EEEEEEEEEecCccCCcCCCCCEEEEEEEEEEEEE--CCEEEEEEEecCHH--HHHHHc
Confidence            999999998764441   22334679999999996  59999999999974  356665

>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A

Probab=99.09  E-value=8e-10  Score=83.23  Aligned_cols=105  Identities=14%  Similarity=0.226  Sum_probs=80.0

Q ss_pred             HHHHHHHHHHH-HhCC--ccccccccceEeeCCcc--cccchHHHHHHH-HHhhhcCCCeEEEE-E--ecCCEEEEEEEE
Q 019996          113 ARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR--SFTGREKYKRRL-WATTALDNPSVEMV-M--LSTSVLSIKWTL  183 (332)
Q Consensus       113 irqL~~Di~~l-regn--rt~sIYApDV~FKDPFN--sFrGrerYkri~-~M~~~L~nPrfem~-m--~s~dti~irWtL  183 (332)
                      ++++++...+. -.||  ...++|++|+.|.+|..  .++|++.+++.+ .+...+  |++++. .  .+++.+.++|++
T Consensus         7 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~~~~~~~~~G~~~i~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~   84 (125)
T 1ohp_A            7 MTAVVQRYVAALNAGDLDGIVALFADDATVENPVGSEPRSGTAAIREFYANSLKLP--LAVELTQEVRAVANEAAFAFIV   84 (125)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHTTEEEEEEEESSTTSCCEESHHHHHHHHHHHTSSC--CEEEECSCCEEETTEEEEEEEE
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHcCCCeEEECCCCCCCccCHHHHHHHHHHhcccC--ceEEEeeeEEEeCCEEEEEEEE
Confidence            44444444443 4555  58899999999999964  899999999988 555554  355443 2  578999999999


Q ss_pred             eeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC
Q 019996          184 RGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA  226 (332)
Q Consensus       184 sg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~  226 (332)
                      .+...      |..+.+.|...+++|. +|+|.++.+|||..+
T Consensus        85 ~~~~~------g~~~~~~~~~~~~~~~-dGkI~~~~~~~d~~~  120 (125)
T 1ohp_A           85 SFEYQ------GRKTVVAPIDHFRFNG-AGKVVSMRALFGEKN  120 (125)
T ss_dssp             EEEET------TEEEEECCEEEEEECT-TSCEEEEEEECCGGG
T ss_pred             EEEec------CceEEEEEEEEEEECC-CCcEEEEEEEEChhh
Confidence            98542      4456688999999998 899999999999754

>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...

Probab=99.07  E-value=1e-09  Score=84.93  Aligned_cols=107  Identities=15%  Similarity=0.206  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHH-HhCC--ccccccccceEeeCCcc--cccchHHHHHHH-HHhhhcCCCeEEE--EEecCCEE-EEEEEE
Q 019996          113 ARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR--SFTGREKYKRRL-WATTALDNPSVEM--VMLSTSVL-SIKWTL  183 (332)
Q Consensus       113 irqL~~Di~~l-regn--rt~sIYApDV~FKDPFN--sFrGrerYkri~-~M~~~L~nPrfem--~m~s~dti-~irWtL  183 (332)
                      ++++++...++ -.||  ...++|++|+.|.+|..  .++|++.+++.+ .+...+.+.++++  ...+++.+ .++|++
T Consensus         9 ~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   88 (131)
T 1oh0_A            9 VQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRV   88 (131)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEESSTTSCCEEHHHHHHHHHHHHHSSSCCEEEESSCCEECSSSEEEEEEEE
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHcCCCEEEEcCCCCCCcccHHHHHHHHHHHhhccceeEeecceEEECCCeEEEEEEEE
Confidence            44444444444 4455  58899999999999987  899999999998 6666665545533  23678888 999999


Q ss_pred             eeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC
Q 019996          184 RGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA  226 (332)
Q Consensus       184 sg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~  226 (332)
                      ++...      |..+.+.|...+++|. +|||.++.+|||...
T Consensus        89 ~~~~~------G~~~~~~~~~~~~~~~-dGkI~~~~~~~d~~~  124 (131)
T 1oh0_A           89 EMVWN------GQPCALDVIDVMRFDE-HGRIQTMQAYWSEVN  124 (131)
T ss_dssp             EEESS------SSEEEEEEEEEEEECT-TSCEEEEEEECCGGG
T ss_pred             EEEeC------CcEEEEEEEEEEEECC-CCcEEhHHhhcChhh
Confidence            98422      4457799999999998 999999999999754

>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9

Probab=99.07  E-value=2.7e-09  Score=84.52  Aligned_cols=109  Identities=12%  Similarity=0.180  Sum_probs=83.9

Q ss_pred             HHHHHHHHH-HhCC--ccccccccceEeeCCcccc--cchHHHHHHH-HHhhhcC-CCeEEEE--EecCCEEEEEEEEee
Q 019996          115 QLVRDILEL-REGN--RALGTFAVSVKYKDPTRSF--TGREKYKRRL-WATTALD-NPSVEMV--MLSTSVLSIKWTLRG  185 (332)
Q Consensus       115 qL~~Di~~l-regn--rt~sIYApDV~FKDPFNsF--rGrerYkri~-~M~~~L~-nPrfem~--m~s~dti~irWtLsg  185 (332)
                      ++++...++ -.||  ...++|++|+.|.+|...-  +|++.+++.+ .+...+. +.++++.  ..+++.+.++|++++
T Consensus         6 ~~v~~~~~a~~~~d~~~~~~~~a~d~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~gd~v~~~~~~~g   85 (144)
T 1sjw_A            6 EIVRRMVSAFNTGRTDDVDEYIHPDYLNPATLEHGIHTGPKAFAQLVGWVRATFSEEARLEEVRIEERGPWVKAYLVLYG   85 (144)
T ss_dssp             HHHHHHHHHHHHCCCTTGGGTEEEEEECGGGGGGTCCSHHHHHHHHHHHHHHHHCTTCEEEEEEEEEETTEEEEEEEEEE
T ss_pred             HHHHHHHHHHhCCCHHHHHHHcCcCeEEccCCCCCCCCCHHHHHHHHHHHHHhCCCCcEEEEEEEEEeCCEEEEEEEEEE
Confidence            344444333 2344  6889999999999998763  8999999998 8888888 8888654  367899999999999


Q ss_pred             eeCcccc---ccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          186 KPKSIIA---NIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       186 ~lklPwA---~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      +..-+|-   +.|.++.+.|.+.+++++  |||++|.+|||..
T Consensus        86 t~~g~~~G~~~tG~~~~~~~~~~~~~~d--GkI~~~~~~~D~~  126 (144)
T 1sjw_A           86 RHVGRLVGMPPTDRRFSGEQVHLMRIVD--GKIRDHRDWPDFQ  126 (144)
T ss_dssp             ECCSCBTTBCCCCCEEEEEEEEEEEEET--TEEEEEEEEECHH
T ss_pred             EecCCCCCcCCCCCEEEEEEEEEEEEEC--CEEEEEEEecCHH
Confidence            8642221   114456799999999975  9999999999964

>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}

Probab=99.07  E-value=2.8e-09  Score=83.79  Aligned_cols=107  Identities=13%  Similarity=0.070  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHH-hCC--ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEEEeeee
Q 019996          114 RQLVRDILELR-EGN--RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWTLRGKP  187 (332)
Q Consensus       114 rqL~~Di~~lr-egn--rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWtLsg~l  187 (332)
                      +++++...+.. .+|  ....+|++|+.|.+   ...|++.+++.+ .+...+.+.++++.  ..+++.+.++|+++++.
T Consensus         6 ~~~v~~~~~~~~~~d~~~~~~~~a~d~~~~~---~~~G~~~~~~~~~~~~~~~pd~~~~i~~~~~~gd~v~~~~~~~gt~   82 (128)
T 3ehc_A            6 NDIYLAYLDSLNHQAFDELGTFVDDNVEHNG---RPFGLSGYRDMLVKDFADIPDLRFEAEILVSDATRLAARLFFDCTP   82 (128)
T ss_dssp             HHHHHHHHHHHHTTCGGGGGGTEEEEEEETT---BCCHHHHHHHHHHHHHHHCTTCCCCEEEEEECSSEEEEEEEEEECC
T ss_pred             HHHHHHHHHHHhcCCHHHHHHhcCcceEeCC---CCCCHHHHHHHHHHHHhhCCCceEEEEEEEEECCEEEEEEEEEEEE
Confidence            34444444442 333  57899999999986   569999999998 88889988888553  36789999999999987


Q ss_pred             Ccccc---ccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          188 KSIIA---NIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       188 klPwA---~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      +-||-   +.|.++.+.|.+.+++.+  |||++|.++||..
T Consensus        83 ~g~~~g~~~tG~~~~~~~~~~~~~~d--GkI~e~~~~~D~~  121 (128)
T 3ehc_A           83 KSIFMDLPVNGRRVQFCEHVFYDFEQ--AKIRRVWSVLDKV  121 (128)
T ss_dssp             SSEETTEECTTCCEEEEEEEEEEEET--TEEEEEEEEECHH
T ss_pred             cCcccCCCCCCCEEEEEEEEEEEEeC--CEEEEEEEccCHH
Confidence            64431   224457899999999975  9999999999953

>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}

Probab=99.06  E-value=2.3e-09  Score=88.96  Aligned_cols=115  Identities=10%  Similarity=0.051  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHHHHHHH-hCC--ccccccccceEeeCCc-ccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEE
Q 019996          109 VESTARQLVRDILELR-EGN--RALGTFAVSVKYKDPT-RSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKW  181 (332)
Q Consensus       109 VE~tirqL~~Di~~lr-egn--rt~sIYApDV~FKDPF-NsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irW  181 (332)
                      -.+.-+++++.+.++. .||  ....+|++|+.|.+|. ...+|++.+++.+ .+...+.+.++++.  ..+++.+.++|
T Consensus        32 ~~~~n~~~v~~~~~a~~~~d~~~l~~~~a~D~v~~~p~~g~~~G~e~~~~~~~~~~~~~pd~~~~i~~~~~~gd~v~~~~  111 (159)
T 3k0z_A           32 EATEMVHAAQRFYAFWDTGKEELIPQTVTENFFDHTLPKGRPQGTEGLKFAAQNFRKIVPNIHCEIEDLLVVGDKVTARL  111 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCGGGHHHHEEEEEEESSCCTTCCSSHHHHHHHHHHHHTTCCSEEEEEEEEEEETTEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHhcCCHHHHHHHcCCCeEEecCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEEEEEEECCEEEEEE
Confidence            3344455666665553 344  4778999999999997 5789999999998 78888888887553  36789999999


Q ss_pred             EEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH
Q 019996          182 TLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA  233 (332)
Q Consensus       182 tLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa  233 (332)
                      +++++.+      |.++.+.|.+.+++.  +|||++|.+|||...  .++|+
T Consensus       112 ~~~gt~~------G~~v~~~~~~i~r~~--dGkI~e~~~~~D~~~--ll~QL  153 (159)
T 3k0z_A          112 SFTGTHN------DKKIDFFAIDILHVK--DGKITEDWHLEDNLT--LKQQL  153 (159)
T ss_dssp             EEEEEET------TEEEEEEEEEEEEEE--TTEEEEEEEEECHHH--HHHHT
T ss_pred             EEEEEEC------CeEEEEEEEEEEEEE--CCEEEEEEEeeCHHH--HHHHc
Confidence            9999865      445789999999995  699999999999654  45554

>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=99.03  E-value=3.8e-09  Score=83.58  Aligned_cols=100  Identities=9%  Similarity=0.132  Sum_probs=79.2

Q ss_pred             HHHHHHHHHHHHH-hCC--ccccccccceEeeCCc-----ccccchHHHHHHH-HHhhhcCCCeEEEEE--ecCCEEEEE
Q 019996          112 TARQLVRDILELR-EGN--RALGTFAVSVKYKDPT-----RSFTGREKYKRRL-WATTALDNPSVEMVM--LSTSVLSIK  180 (332)
Q Consensus       112 tirqL~~Di~~lr-egn--rt~sIYApDV~FKDPF-----NsFrGrerYkri~-~M~~~L~nPrfem~m--~s~dti~ir  180 (332)
                      ..+++++...++. .||  .+.++|++|+.|.+|.     ..++|++.+++.+ . ...+.+.++++..  ..++.+.++
T Consensus        18 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~p~~~~~g~~~~G~~~i~~~~~~-~~~~~~~~~~i~~~~~~gd~v~~~   96 (129)
T 3fh1_A           18 QTAEIMRRFNDVFQLHDPAALPELIAEECVIENTVPAPDGARHAGRQACVQLWSA-IATQPGTRFDLEETFVAGDRATIR   96 (129)
T ss_dssp             HHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEECSCSTTTCCEEESHHHHHHHHHH-HHHCTTCEEEEEEEEEETTEEEEE
T ss_pred             hHHHHHHHHHHHHHccCHHHHHHhcCCCEEEECCCCCCCCCcccCHHHHHHHHHH-HhcCCCceEEEeEEEEcCCEEEEE
Confidence            3455555555553 444  5889999999999984     4579999999998 6 6777777886543  678999999


Q ss_pred             EEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeecc
Q 019996          181 WTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWD  223 (332)
Q Consensus       181 WtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD  223 (332)
                      |++++         +.++.+.|.+.++++  +|||++|.+||+
T Consensus        97 ~~~~~---------G~~~~~~~~~~~~~~--dGkI~e~~~y~~  128 (129)
T 3fh1_A           97 WRYWM---------ADGNSVRGVNLMRVQ--DGRIVEAMGYVK  128 (129)
T ss_dssp             EEEEC---------TTSCEEEEEEEEEEE--TTEEEEEEEEEC
T ss_pred             EEEEC---------CCeeEEeceEEEEEc--CCEEEEEEEEEc
Confidence            99976         345789999999998  599999999998

>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}

Probab=99.02  E-value=2.4e-09  Score=88.68  Aligned_cols=106  Identities=8%  Similarity=0.154  Sum_probs=77.8

Q ss_pred             chhHHHHHHHHHHHHHHHHhCC--ccccccccceEeeCCc--ccccchHHHHHHH-HHhhhcCCCeEEEEEe--cCCEEE
Q 019996          106 SPLVESTARQLVRDILELREGN--RALGTFAVSVKYKDPT--RSFTGREKYKRRL-WATTALDNPSVEMVML--STSVLS  178 (332)
Q Consensus       106 Sp~VE~tirqL~~Di~~lregn--rt~sIYApDV~FKDPF--NsFrGrerYkri~-~M~~~L~nPrfem~m~--s~dti~  178 (332)
                      .|.+.++++..-+   .+..||  .+.++|++||.|.||+  +.++|++.+++.+ .+.+.+.+.++.....  +++.+.
T Consensus         8 ~~~~~~~~~~~~~---a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~~v~~~~~~~~~~~~~f~~~~~~~~~dg~~~~   84 (143)
T 3mso_A            8 EANAAATLAEWHG---LIARRDLSGLPRLLHPDAVFRSPMAHKPYAGAPVVSMILNTVLTVFEDFAYHRQLASADGRSVV   84 (143)
T ss_dssp             CHHHHHHHHHHHH---HHHTTCCTTGGGGEEEEEEEECSSCSSCEESHHHHHHHHHHHHHHCEEEEEEEEEEETTSSEEE
T ss_pred             cHHHHHHHHHHHH---HHhcCCHHHHHHhcCCCEEEECCCCCCCccCHHHHHHHHHHHHhhCCceEEEEEEEccCCCEEE
Confidence            4555555555444   335565  5999999999999999  8999999999999 8888875333332333  455554


Q ss_pred             EEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          179 IKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       179 irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      ++|  ++..       +|. .++|.+.++||+ +|||.+.+.+||+-
T Consensus        85 ~~f--~~~~-------~g~-~v~Gv~v~~~~~-dGkI~~~~~~~~P~  120 (143)
T 3mso_A           85 LEF--SARV-------GER-ELKGIDMIRFDD-DGRIVDFEVMVRPM  120 (143)
T ss_dssp             EEE--EEEE-------TTE-EEEEEEEEEECT-TSCEEEEEEEEESH
T ss_pred             EEE--EEEE-------CCE-EEEEEEEEEECC-CCcEEEEEEEECcH
Confidence            444  4442       343 899999999999 99999999999974

>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9

Probab=98.97  E-value=5.5e-09  Score=81.35  Aligned_cols=95  Identities=16%  Similarity=0.245  Sum_probs=76.4

Q ss_pred             HhCC--ccccccccceEeeCCc--------ccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEEEeeeeCcc
Q 019996          124 REGN--RALGTFAVSVKYKDPT--------RSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWTLRGKPKSI  190 (332)
Q Consensus       124 regn--rt~sIYApDV~FKDPF--------NsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWtLsg~lklP  190 (332)
                      -.||  ...++|++|+.|.+|.        ..++|++.+++.+ .+...+.+.++++.  ..+++.+.++|++++..+  
T Consensus        17 ~~~d~~~~~~l~a~D~~~~~~~~~~p~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~v~~~~~~~~~--   94 (132)
T 3ebt_A           17 HRRDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIAEMRLAPDEFIESGERIVVLGTRRVTAV--   94 (132)
T ss_dssp             HTTCHHHHHTTEEEEEEEEECGGGGGGTCCEEEEHHHHHHHHHHHGGGTEEEEEEEEEEEEEETTEEEEEEEEEEEET--
T ss_pred             hccCHHHHHHhcCCCEEEEeCCCCCCcccCCcCcCHHHHHHHHHHHHhhCCceEEEEeEEEEeCCEEEEEEEEEEEeC--
Confidence            3455  4789999999999984        5899999999998 77777777777553  357889999999998743  


Q ss_pred             ccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          191 IANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       191 wA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                        . |..+.+.+..-+++.  +|||++|.+|||..
T Consensus        95 --~-G~~~~~~~~~v~~~~--dGkI~~~~~y~D~~  124 (132)
T 3ebt_A           95 --N-GRSATLKFVHVWRFE--NGRAVTFEDHFDTA  124 (132)
T ss_dssp             --T-SCEEEEEEEEEEEEE--TTEEEEEEEECCHH
T ss_pred             --C-CCEEeeeEEEEEEEE--CCEEEEEEEEeeHH
Confidence              1 445678999999995  69999999999953

>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10

Probab=98.96  E-value=1.9e-09  Score=89.13  Aligned_cols=107  Identities=16%  Similarity=0.202  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHHHHHHHhCC--ccccccccceEeeCCcc------cccchHHHHHHH-HHhhhcCCCeE---EEEE-ecCC
Q 019996          109 VESTARQLVRDILELREGN--RALGTFAVSVKYKDPTR------SFTGREKYKRRL-WATTALDNPSV---EMVM-LSTS  175 (332)
Q Consensus       109 VE~tirqL~~Di~~lregn--rt~sIYApDV~FKDPFN------sFrGrerYkri~-~M~~~L~nPrf---em~m-~s~d  175 (332)
                      .++++++..+-+   -.||  .+.++|++|+.|.+|++      .++|++.+++.+ .+...+.+. +   .+.. .+++
T Consensus        25 ~~~~v~~~~~a~---~~~D~~~l~~l~a~D~v~~~P~~~~g~~~~~~G~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~g~  100 (163)
T 1z1s_A           25 AKEILVHSLRLL---ENGDARGWCDLFHPEGVLEFPYAPPGWKTRFEGRETIWAHMRLFPEHLTVR-FTDVQFYETADPD  100 (163)
T ss_dssp             HHHHHHHHHHHH---HTTCHHHHHHTEEEEEEEECSSCCTTSCCEEESHHHHHHTTTTGGGTEEEE-ECCCEEECCSSTT
T ss_pred             HHHHHHHHHHHH---HCCCHHHHHHHCCCCEEEECcCCCCCCCcccCCHHHHHHHHHHHHHhCccc-eeeeEEEEEeCCC
Confidence            344444443322   3455  58899999999999975      489999999998 666665544 3   2222 5678


Q ss_pred             EEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          176 VLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       176 ti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      .+.++|+++++.+.    .|..+.++|.+.+++++  |||++|+||||..
T Consensus       101 ~vv~~~~~~g~~~~----tG~~~~~~~~~v~~v~d--GkI~~~~~y~D~~  144 (163)
T 1z1s_A          101 LAIGEFHGDGVATV----SGGKLAQDYISVLRTRD--GQILLYRDFWNPL  144 (163)
T ss_dssp             EEEEEEEEEEEETT----TCCEEEEEEEEEEEEET--TEEEEEEEEECHH
T ss_pred             EEEEEEEEEEEEeC----CCCEEccceEEEEEecC--CEEEEEEeecCHH
Confidence            89999999998652    25557899999999986  9999999999963

>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}

Probab=98.94  E-value=1.1e-08  Score=80.39  Aligned_cols=116  Identities=16%  Similarity=0.206  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHHH-hCC--ccccccccceEeeCC-cccccchHHHHHHH-HHhhhcCCCeE-EEE-E--ecCCEEEEEEEE
Q 019996          113 ARQLVRDILELR-EGN--RALGTFAVSVKYKDP-TRSFTGREKYKRRL-WATTALDNPSV-EMV-M--LSTSVLSIKWTL  183 (332)
Q Consensus       113 irqL~~Di~~lr-egn--rt~sIYApDV~FKDP-FNsFrGrerYkri~-~M~~~L~nPrf-em~-m--~s~dti~irWtL  183 (332)
                      .+++++...+.. .||  ...++|++|+.|..| -..++|++.+++.+ .+...+.. ++ ++. .  .+++.+.++|++
T Consensus        10 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~p~~~~~~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gd~v~~~~~~   88 (140)
T 3i0y_A           10 ATGLVQAYYEAFNRGDWDAMLAFLAEDVAHDLNQGPREIGRAAFASFLQRMNDSYRE-QLRDIVVTANDEGTRVGAEYVV   88 (140)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECTTSCEEESHHHHHHHHHHHHHHEEE-EEEEEEEEECTTSSEEEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHcCCcEEEEcCCCCceEcHHHHHHHHHHHhhhcch-hhhheeeeecccCCEEEEEEEE
Confidence            445555555553 444  488999999999998 46899999999987 55444322 33 332 2  468999999999


Q ss_pred             eeeeCccc----cccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH
Q 019996          184 RGKPKSII----ANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA  233 (332)
Q Consensus       184 sg~lklPw----A~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa  233 (332)
                      +++..-+|    .+.|.++.+.|.+.++++  +|||++|.+|||..  +.++|+
T Consensus        89 ~gt~~g~~~g~p~~tG~~~~~~~~~~~~~~--dGkI~~~~~y~D~~--~~~~Ql  138 (140)
T 3i0y_A           89 HGVYHTTDEGLPDANGQTYVLPGGAFFDVR--DGQITRVTNYYNLQ--EWIAQV  138 (140)
T ss_dssp             EEEECSCCTTSSCCSCEEEEEEEEEEEEEE--TTEEEEEEEEECHH--HHHHHH
T ss_pred             EEEeecccCCCcCCCCCEEEEEeeEEEEEE--CCEEEEEEEEcCHH--HHHHhh
Confidence            99865443    122444679999999997  49999999999953  334443

>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0

Probab=98.93  E-value=5.5e-09  Score=81.88  Aligned_cols=106  Identities=17%  Similarity=0.154  Sum_probs=80.3

Q ss_pred             HHHHHHHHHH-HhCC--ccccccccceEeeCCcc-----cccchHHHHHHH-HHhhhcCCCeEEE--EEecCCEEEEEEE
Q 019996          114 RQLVRDILEL-REGN--RALGTFAVSVKYKDPTR-----SFTGREKYKRRL-WATTALDNPSVEM--VMLSTSVLSIKWT  182 (332)
Q Consensus       114 rqL~~Di~~l-regn--rt~sIYApDV~FKDPFN-----sFrGrerYkri~-~M~~~L~nPrfem--~m~s~dti~irWt  182 (332)
                      +++++...+. ..||  ...++|++|+.|.+|..     .++|++.+++.+ .+...+.+.++++  ...+++.+.+.|+
T Consensus         8 ~~~v~~~~~a~~~~d~~~~~~l~a~D~~~~~p~~~p~~g~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~gd~v~v~~~   87 (135)
T 3fgy_A            8 VQIVKDFFAAMGRGDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKASEMVEISYPEPPEFVAQGERVLVVGF   87 (135)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHTEEEEEEEEECSSSTTCEEEEHHHHHHHHHHHHHHHEEEECSSCCEEEEETTEEEEEEE
T ss_pred             HHHHHHHHHHHHcCCHHHHHHhcCCCeEEEEcCCCccceEEeCHHHHHHHHHHHHHhhCcceeeeEEEEEcCCEEEEEEE
Confidence            4444444443 4455  47899999999999873     679999999988 7777776555532  3467899999999


Q ss_pred             EeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          183 LRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       183 Lsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      ++++.+.    .|..+.+.+...+++ . +|||++|.+|||..
T Consensus        88 ~~~~~~~----~G~~~~~~~~~~~~~-~-dGkI~~~~~y~D~~  124 (135)
T 3fgy_A           88 ATGRVKS----TNRTFEDDWVFAITV-R-KSKVTSIREYIDTL  124 (135)
T ss_dssp             EEEEETT----TCCEEEEEEEEEEEE-E-TTEEEEEEEECBHH
T ss_pred             EeEEEcC----CCCEecccEEEEEEE-E-CCEEEEEEEEecHH
Confidence            9998641    144567999999999 4 69999999999964

>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}

Probab=98.92  E-value=4.9e-09  Score=86.98  Aligned_cols=103  Identities=13%  Similarity=0.284  Sum_probs=79.6

Q ss_pred             hHHHHHHHHHHHHHHHHhCCc---cccccccceEeeCCc----ccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEE
Q 019996          108 LVESTARQLVRDILELREGNR---ALGTFAVSVKYKDPT----RSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVL  177 (332)
Q Consensus       108 ~VE~tirqL~~Di~~lregnr---t~sIYApDV~FKDPF----NsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti  177 (332)
                      ...++++.+.+-+   .+|+.   +..+|++||.|.||+    -..+|++.+++.+ ++..++...++++.  ...++.+
T Consensus        21 ~~kevv~r~~e~~---~~gd~~~~l~~lya~D~v~~dp~~~~~~~~~G~eai~~~~~~~~~~~~~~~~~i~~~~v~gd~v   97 (136)
T 3hk4_A           21 TIAEIAKDFTELL---KQGDNAGAAEKYNADDIASYEAMEGPMAVSHGKEALRQKSQWWQENHEVHGGSVEGPYVNGDQF   97 (136)
T ss_dssp             CHHHHHHHHHHHH---HTTCHHHHHHHHEEEEEEEECSSCSTTSEEESHHHHHHHHHHHHHTEEEEEEEEEEEEEETTEE
T ss_pred             cHHHHHHHHHHHH---HcCCcHHHHHHHCCCCEEEEcCCCCCccccCCHHHHHHHHHHHHhcCCeeeeeecceEEcCCEE
Confidence            3455555555433   45552   589999999999994    4689999999998 77777665556553  3678999


Q ss_pred             EEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEe
Q 019996          178 SIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHE  219 (332)
Q Consensus       178 ~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHi  219 (332)
                      .++|+++++.++    .|.++.++|++-+++ . +|||++|+
T Consensus        98 ~v~~~~~gth~~----tG~~i~~~~i~v~rv-~-DGkIv~~r  133 (136)
T 3hk4_A           98 ALRFKFDVTPKA----TGERVTMDEVGLYTV-K-NGKITEER  133 (136)
T ss_dssp             EEEEEEEEEETT----TCCCEEEEEEEEEEE-E-TTEEEEEE
T ss_pred             EEEEEEEEEECC----CCcEEEEEEEEEEEE-E-CCEEEEEE
Confidence            999999999872    267789999999999 4 69999997

>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}

Probab=98.90  E-value=1.7e-08  Score=83.12  Aligned_cols=116  Identities=14%  Similarity=0.186  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHH-HhCC--ccccccccceEeeCCc-ccccchHHHHHHH-HHhhhcCCCeEE-EE---EecCCEEEEEEEE
Q 019996          113 ARQLVRDILEL-REGN--RALGTFAVSVKYKDPT-RSFTGREKYKRRL-WATTALDNPSVE-MV---MLSTSVLSIKWTL  183 (332)
Q Consensus       113 irqL~~Di~~l-regn--rt~sIYApDV~FKDPF-NsFrGrerYkri~-~M~~~L~nPrfe-m~---m~s~dti~irWtL  183 (332)
                      +|++++...+. -.||  ...++|++|+.|..|. ..++|++.+++.+ .+...+. ..++ +.   ..+++.+.++|++
T Consensus        22 ~~~lv~~~~~a~~~~D~~~l~~l~a~D~v~~~p~g~~~~G~e~i~~~~~~~~~~~~-~~~~~~~~~~~~~gd~v~~~~~~  100 (151)
T 3f7x_A           22 ATELVNAYYAAFNAGDMPAFLALLSEDVIHDINQGERQMGKARFAAFMEKMNRCYR-ERLADIVVMQNADGSRAAAEFTV  100 (151)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECTTSCEEESHHHHHHHHHHHHHHEE-EEEEEEEEEECTTSSEEEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHhcCCCEEEECCCCCCcCCHHHHHHHHHHHHHhhc-cceeEEEEEEecCCCEEEEEEEE
Confidence            34455555444 3455  4789999999998765 5799999999988 6666552 2332 21   1568999999999


Q ss_pred             eeeeCcccc----ccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH
Q 019996          184 RGKPKSIIA----NIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA  233 (332)
Q Consensus       184 sg~lklPwA----~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa  233 (332)
                      +++...++.    +.|.++.++|.+-+++.  +|||++++||||..  +.++|+
T Consensus       101 ~gt~~g~~~G~p~~tG~~~~~~~~~~~~~~--dGkI~~~~~y~D~~--~~l~Ql  150 (151)
T 3f7x_A          101 HGQYLADDEGLPTANGQTYVLPAGAFFYIH--CGKIARVTNYYNLN--DWVEQV  150 (151)
T ss_dssp             EEEECSCCTTSCCCSSCEEEEEEEEEEEEE--TTEEEEEEEEECHH--HHHHHH
T ss_pred             EEEEeccCCCCcCCCCCEEEEEEEEEEEEE--CCEEEEEEEECCHH--HHHHhh
Confidence            998442221    11445679999999997  59999999999964  455553

>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10

Probab=98.89  E-value=1.6e-08  Score=80.08  Aligned_cols=106  Identities=10%  Similarity=0.178  Sum_probs=80.2

Q ss_pred             HHHHHHHHHH-HhCC--ccccccccceEeeCCc-----ccccchHHHH-HHH-HHhhhcCCCeEEEE--EecCCEEEEEE
Q 019996          114 RQLVRDILEL-REGN--RALGTFAVSVKYKDPT-----RSFTGREKYK-RRL-WATTALDNPSVEMV--MLSTSVLSIKW  181 (332)
Q Consensus       114 rqL~~Di~~l-regn--rt~sIYApDV~FKDPF-----NsFrGrerYk-ri~-~M~~~L~nPrfem~--m~s~dti~irW  181 (332)
                      +++++...+. ..||  ...++|++|+.|.+|.     ..++|++.+. +.+ .+...+.+.++++.  ..+++.+.++|
T Consensus        15 ~~~v~~~~~a~~~gD~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~v~~   94 (140)
T 3ec9_A           15 YQIVADHYAASDRHDPAAMMADIAPAIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGYTFKLDALHDAGDTVIGVG   94 (140)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECTTSTTCEEECSHHHHHHHTHHHHHHHEEEEEEEEEEEEEETTEEEEEE
T ss_pred             HHHHHHHHHHHhCCCHHHHHHhcCCCeEEEEcCCCccceEEcCHHHHHHHHHHHHHhhCCcceeEEEEEEEcCCEEEEEE
Confidence            3444444443 3455  4889999999999985     5789999996 556 77777776667543  35789999999


Q ss_pred             EEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          182 TLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       182 tLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      +++++.+    +.|..+.+.+...+++.  +|||++|++|||..
T Consensus        95 ~~~~~~~----~tG~~~~~~~~~v~~v~--dGkI~~~~~y~D~~  132 (140)
T 3ec9_A           95 RYSGTYR----RTGKSFECRVAHVWRVD--AGKIVHFEQFTDTL  132 (140)
T ss_dssp             EEEEEET----TTCCEEEEEEEEEEEEE--TTEEEEEEEEEBHH
T ss_pred             EEEEEEc----CCCCEEEeEEEEEEEEE--CCEEEEEEEEEcHH
Confidence            9999865    21445678999999995  59999999999964

>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}

Probab=98.87  E-value=3.7e-08  Score=80.44  Aligned_cols=101  Identities=15%  Similarity=0.190  Sum_probs=77.9

Q ss_pred             HhCC--ccccccccceEeeCCccc-----ccchHHHHHHH-HHhhhcCC-CeEEE---EEecCCEEEEEEEEeeeeCccc
Q 019996          124 REGN--RALGTFAVSVKYKDPTRS-----FTGREKYKRRL-WATTALDN-PSVEM---VMLSTSVLSIKWTLRGKPKSII  191 (332)
Q Consensus       124 regn--rt~sIYApDV~FKDPFNs-----FrGrerYkri~-~M~~~L~n-Prfem---~m~s~dti~irWtLsg~lklPw  191 (332)
                      ..||  ...++|++||.|.+|...     ++|++.+++.+ .+...+.. .+++.   ...+++.+.++|+++++..   
T Consensus        34 ~~gD~~~l~~l~a~D~v~~~p~~~~~~g~~~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~gd~v~v~~~~~~~~~---  110 (148)
T 3g8z_A           34 QTGDHATLGSIISPDVIWHQPGNHQFSGTHRGMAVVGPMLGKMMEVSNGTFAISRADDYMASGDWVAITLEFSGQAN---  110 (148)
T ss_dssp             HHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHHHHHTTTCCEEEEEEEEEEETTEEEEEEEEEEEET---
T ss_pred             hcCCHHHHHHHcCCCEEEEcCCCCCCCceEcCHHHHHHHHHHHHHhcCCceEEEecceEEecCCEEEEEEEEEEEeC---
Confidence            3455  478999999999999763     79999999998 77777753 45532   3467899999999998732   


Q ss_pred             cccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHHHH
Q 019996          192 ANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFF  235 (332)
Q Consensus       192 A~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQaf~  235 (332)
                         |.++.+.|...+++ . +|||++|.+|||..   ++.++|+
T Consensus       111 ---G~~~~~~~~~v~~~-~-dGkI~e~~~y~D~~---~~~~af~  146 (148)
T 3g8z_A          111 ---GVTLKQAGVDLLRI-E-DGKIVEVRLFSADQ---TQEDAFW  146 (148)
T ss_dssp             ---TEEEEEEEEEEEEE-E-TTEEEEEEEEESCH---HHHHHHH
T ss_pred             ---CcEEEeeEEEEEEE-E-CCEEEEEEEecCCH---HHHHHhh
Confidence               44567899999999 5 79999999999953   3445554

>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10

Probab=98.85  E-value=2.4e-08  Score=79.05  Aligned_cols=107  Identities=10%  Similarity=0.146  Sum_probs=79.4

Q ss_pred             HHHHHHHHHHH-HhCC--ccccccccceEeeCCcc------cccchHHHHHHH-HHhhhcCCCeE--EE-E-EecCCEEE
Q 019996          113 ARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR------SFTGREKYKRRL-WATTALDNPSV--EM-V-MLSTSVLS  178 (332)
Q Consensus       113 irqL~~Di~~l-regn--rt~sIYApDV~FKDPFN------sFrGrerYkri~-~M~~~L~nPrf--em-~-m~s~dti~  178 (332)
                      .+++++...+. ..||  ...++|++|+.|.+|+.      .++|++.+++.+ .+...+.+.++  .+ + ..+++.+.
T Consensus        12 ~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~g~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~   91 (150)
T 1s5a_A           12 ACETLRKFMAYMLEKDMKSWTELWDENAVFEFPYAPEGSPKRIEGKAAIYDYIKDYPKQIHLSSFTAPTVYRSADSNTVI   91 (150)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCTTSCSEEESHHHHHHHHTTHHHHEEEEEECCCEEEEBSSSSEEE
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHhCCCCEEEEeecCCCCCCccccCHHHHHHHHHHhhhcCCcccceeEEEEEecCCCEEE
Confidence            34444444444 4455  58899999999999952      589999999998 66666654444  22 2 36789999


Q ss_pred             EEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          179 IKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       179 irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      ++|+++++.+.    .|..+.+.+...+++ . +|+|+++++|||..
T Consensus        92 ~~~~~~~~~~~----~G~~~~~~~~~~~~~-~-dGkI~~~~~~~d~~  132 (150)
T 1s5a_A           92 AEFQCDGHVIE----TGLPYRQSYISVIET-R-DGRIVRYRDYWNPL  132 (150)
T ss_dssp             EEEEEEEEETT----TCCBCCCEEEEEEEE-E-TTEEEEEEEEECHH
T ss_pred             EEEEEEEEEcC----CCCEEEEEEEEEEEE-e-CCEEEEEEEeeChH
Confidence            99999997541    144467899999999 4 69999999999964

>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20

Probab=98.83  E-value=2.3e-08  Score=81.02  Aligned_cols=115  Identities=8%  Similarity=-0.004  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHH-HhCC--ccccccccceEeeCCcc--------cccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEE
Q 019996          113 ARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR--------SFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLS  178 (332)
Q Consensus       113 irqL~~Di~~l-regn--rt~sIYApDV~FKDPFN--------sFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~  178 (332)
                      +++|++++.+. -.||  ...++|++||.|.+|-.        ..+|++.+++.+ .+...+...++++.  ..+++.+.
T Consensus         6 ~~~~v~~~~~a~~~gD~~~l~~l~a~Dv~~~~~g~~~~~p~~g~~~G~~av~~~~~~~~~~~~~~~~~~~~~~~~gd~v~   85 (143)
T 3dm8_A            6 LWRFSRALHRALNDRQTEELATIIDDNIDWAIYGPIDMFPFFGARQGKAAVLEVCRQIADSVRIYRYHRESVMLGIDSAA   85 (143)
T ss_dssp             HHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEESCTTTCTTCEEEESHHHHHHHHHHHHHHEEEEEEEEEEEEECSSEEE
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHhcCCCeEEEecCCCCcCCCCccccCHHHHHHHHHHHHHhcCcceEEEEEEEEcCCeEE
Confidence            35555555555 3455  48999999999999853        589999999998 77888877677543  36788888


Q ss_pred             EEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHHHH
Q 019996          179 IKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAFF  235 (332)
Q Consensus       179 irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQaf~  235 (332)
                      +.+++++..+    +.|.++.+++.+.+++.  +|||++|+||||...  .++|++-
T Consensus        86 v~~~~~~~~~----~tG~~~~~~~~~~~~v~--dGkI~~~r~y~D~~~--l~~q~~g  134 (143)
T 3dm8_A           86 SMVRYSLTAA----GTNRPISVRMALFTQFQ--NGRLTNLRMVLDTFD--LVEQALG  134 (143)
T ss_dssp             EEEEEEEEET----TTCCEEEEEEEEEEEEE--TTEEEEEEEEECHHH--HHHHHHT
T ss_pred             EEEEEEEEEe----CCCCEEEEEEEEEEEEE--CCEEEEEEEEEcHHH--HHHHHhC
Confidence            7888887654    21444679999999996  599999999999753  3567654

>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}

Probab=98.83  E-value=2e-08  Score=78.68  Aligned_cols=99  Identities=13%  Similarity=0.204  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHHHH-hCC--ccccccccceEeeCCc---------ccccchHHHHHHH-HHhhhcCCCeEEEEE--ecCC
Q 019996          111 STARQLVRDILELR-EGN--RALGTFAVSVKYKDPT---------RSFTGREKYKRRL-WATTALDNPSVEMVM--LSTS  175 (332)
Q Consensus       111 ~tirqL~~Di~~lr-egn--rt~sIYApDV~FKDPF---------NsFrGrerYkri~-~M~~~L~nPrfem~m--~s~d  175 (332)
                      +.++++++...+.. .+|  .+.++|++|+.|.||.         ..++|++.+++.+ .++..+.+.++++..  ..++
T Consensus         8 ~~~~~~~~~~~~a~n~~D~~~l~~l~a~D~v~~~p~~~~~~g~~~~~~~G~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (122)
T 3h3h_A            8 AFAQQFSREWIDAWNAHDLDAILSHYADGFEMSSPMIVQIAGEPSGRLRGKEQVGAYWREALRMIPDLHFEWIATLAGVD   87 (122)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECHHHHHHHC-CCCEEEHHHHHHHHHHHHHHHCTTCCCEEEEEEECSS
T ss_pred             HHHHHHHHHHHHHHhccCHHHHHHhcCCCEEEECCCcccccCCCCCcEEcHHHHHHHHHHHHHHCCCcEEEEEEEEecCc
Confidence            34556666665553 344  5899999999999994         6799999999999 788888888886643  2344


Q ss_pred             EEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeecc
Q 019996          176 VLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWD  223 (332)
Q Consensus       176 ti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD  223 (332)
                          +|++.++.+      .|.   .+...++||. +|||++++.||+
T Consensus        88 ----~~~~~~~~~------~G~---~~~~~~~~~~-dGkI~~~~~~~~  121 (122)
T 3h3h_A           88 ----SVAIHYRGA------KGR---LALEVFHFGP-DRRVVKALAHYA  121 (122)
T ss_dssp             ----EEEEEEECG------GGC---EEEEEEEECT-TSSEEEEEEEEC
T ss_pred             ----EEEEEEECC------CCC---EEEEEEEECC-CCcEEEEEEEec
Confidence                366666533      333   2278999999 999999999997

>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*

Probab=98.76  E-value=1.4e-07  Score=75.14  Aligned_cols=107  Identities=16%  Similarity=0.235  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHHHHHHHhCC--ccccccccceEeeCCc-ccccchHHHHHHH-HHhhhcCCC-eEEEE--EecCCEEEEEE
Q 019996          109 VESTARQLVRDILELREGN--RALGTFAVSVKYKDPT-RSFTGREKYKRRL-WATTALDNP-SVEMV--MLSTSVLSIKW  181 (332)
Q Consensus       109 VE~tirqL~~Di~~lregn--rt~sIYApDV~FKDPF-NsFrGrerYkri~-~M~~~L~nP-rfem~--m~s~dti~irW  181 (332)
                      .++++++..+-+   ..||  ...++|++|+.|.+|- ..++|++.+++.+ .+...+. . ++++.  ..+++.+.+.|
T Consensus        24 ~~~~v~~~~~a~---~~~D~~~l~~l~a~D~~~~~~~~~~~~G~~~i~~~~~~~~~~~~-~~~~~~~~~~~~gd~v~~~~   99 (149)
T 1nww_A           24 DEKIVLEFMDAL---TSNDAAKLIEYFAEDTMYQNMPLPPAYGRDAVEQTLAGLFTVMS-IDAVETFHIGSSNGLVYTER   99 (149)
T ss_dssp             HHHHHHHHHHHG---GGCCHHHHHTTBCSSCEEEETTSCCEESHHHHHHHHHHHHHHEE-EEEEEEEEEEEETTEEEEEE
T ss_pred             HHHHHHHHHHHH---hcCCHHHHHHHhCCCEEEEcCCCCCccCHHHHHHHHHHHHhhCC-cceEEEEEEEecCCEEEEEE
Confidence            444444443322   4555  5789999999999874 5799999999998 6666665 4 55443  35788888999


Q ss_pred             EEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          182 TLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       182 tLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      +..++.+    +.|..+.+.+.+.+++++  |+|+++++|||..
T Consensus       100 ~~~~~~~----~~G~~~~~~~~~~~~~~d--GkI~~~~~~~d~~  137 (149)
T 1nww_A          100 VDVLRAL----PTGKSYNLSILGVFQLTE--GKITGWRDYFDLR  137 (149)
T ss_dssp             EEEEEET----TTCCEEEEEEEEEEEEET--TEEEEEEEECCHH
T ss_pred             EEEEEEc----CCCCEEEEeeEEEEEEeC--CEEEEEehhcCHH
Confidence            9988763    114456799999999986  9999999999964

>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}

Probab=98.76  E-value=2.4e-08  Score=82.28  Aligned_cols=102  Identities=15%  Similarity=0.176  Sum_probs=76.3

Q ss_pred             ccccccccceEee-CCcccccchHHHHHHH-HHhhhcCCCeEEEE-E--ecCCEEEEEEEEeeeeCcccc----ccCCce
Q 019996          128 RALGTFAVSVKYK-DPTRSFTGREKYKRRL-WATTALDNPSVEMV-M--LSTSVLSIKWTLRGKPKSIIA----NIGGDL  198 (332)
Q Consensus       128 rt~sIYApDV~FK-DPFNsFrGrerYkri~-~M~~~L~nPrfem~-m--~s~dti~irWtLsg~lklPwA----~~ggrl  198 (332)
                      ...++|++|+.+. .|....+|++.+++.+ .+...+.+-..++. +  .+++.+.++|+++|+...+|.    +.|.++
T Consensus        38 ~l~~l~a~D~v~~~~~~~~~~G~e~i~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~~~~~~~gt~~g~~~G~p~~tG~~v  117 (150)
T 3f8h_A           38 GMLACLSEDVAHHVNEGNIRVGKEKFAAFCAHMSHCYKEELTDMVIFATPDATRAAAEYTVNGTYLATDEGLPEARQQSY  117 (150)
T ss_dssp             HHHTTEEEEEEEEEETTEEEESHHHHHHHHHHHHHHEEEEEEEEEEEECTTSSEEEEEEEEEEEECSCCTTSCCCSSEEE
T ss_pred             HHHHHcCCCeEEeCCCCcceeCHHHHHHHHHHHHHhCCccccceEEEEecCCCEEEEEEEEEEEEecCCCCCcCCCCCEE
Confidence            4889999999963 4557899999999988 77777765222443 2  468999999999998654331    213446


Q ss_pred             EEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH
Q 019996          199 IVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA  233 (332)
Q Consensus       199 ~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa  233 (332)
                      .++|.+-+++.+  |||++++||||..  +.++|+
T Consensus       118 ~~~~~~~~~~~d--GkI~~~~~y~D~~--~~~~Ql  148 (150)
T 3f8h_A          118 KLPAGSFFDLRD--GLITRVTTYYNLS--DWIKQV  148 (150)
T ss_dssp             EEEEEEEEEEET--TEEEEEEEEECHH--HHHHHH
T ss_pred             EEeeeEEEEEeC--CEEEEEEEECCHH--HHHHHh
Confidence            799999999975  9999999999953  344453

>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24

Probab=98.70  E-value=4.2e-08  Score=81.65  Aligned_cols=94  Identities=15%  Similarity=0.202  Sum_probs=77.3

Q ss_pred             ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEE----EecCCEEEEEEEEeeeeCccccccCCceEEee
Q 019996          128 RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMV----MLSTSVLSIKWTLRGKPKSIIANIGGDLIVKV  202 (332)
Q Consensus       128 rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~----m~s~dti~irWtLsg~lklPwA~~ggrl~I~G  202 (332)
                      .+.++|+||+.+..|....+|++.++..+ .++..+.+.++..+    ..+++.+..+|++.|+++    . |..+.+.|
T Consensus        27 ~l~~Lfa~Dav~~~~~~~~~G~~ai~~F~~~~~~a~~~~~~~~~~~v~~~~gd~~~~~w~~~g~~~----~-G~~~~~~g  101 (131)
T 3er7_A           27 DLISLFSDEITFVLNGQEQHGIDAWKQFVRMVFTANQDIKHMYAGWVPSETGDTMETRWAVCGKSA----D-GSVFTQDG  101 (131)
T ss_dssp             HHHHTEEEEEEEEETTEEEESHHHHHHHHHHHHHHEEEEEEEECCCEECSSTTCEEEEEEEEEEET----T-SCEEEEEE
T ss_pred             HHHHHhCCCeEecCCCCCcCChHHHHHHHHHHHhhCcCceEEEEEEEEecCCCEEEEEEEEEEEEC----C-CCEEEEee
Confidence            46788999999977777789999999999 77788888875332    346679999999999966    2 44578999


Q ss_pred             eeEEEEeCCCCcEEEEeeeccCCCC
Q 019996          203 YSKFTLNQISGQVIEHEELWDLSAS  227 (332)
Q Consensus       203 ~Se~~LN~isGlVvsHiDyWD~S~~  227 (332)
                      .+.++|++ +|||.+++=++|.-..
T Consensus       102 ~dv~~fd~-dGkI~~~~~~~d~~~~  125 (131)
T 3er7_A          102 TDIARLNA-DGKIVYLANVPDDTAM  125 (131)
T ss_dssp             EEEEEECT-TSCEEEEEEEECCC--
T ss_pred             eEEEEEcC-CCcEEEEEEccChHHH
Confidence            99999998 8999999999997653

>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}

Probab=98.70  E-value=2.5e-07  Score=78.07  Aligned_cols=92  Identities=16%  Similarity=0.241  Sum_probs=72.0

Q ss_pred             HHhCC--ccccccccceEeeCCcc--cccchHHHHHHH-HHhhhcCCCeEEEEEecCCEEEEEEEEeeeeCccccccCCc
Q 019996          123 LREGN--RALGTFAVSVKYKDPTR--SFTGREKYKRRL-WATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGD  197 (332)
Q Consensus       123 lregn--rt~sIYApDV~FKDPFN--sFrGrerYkri~-~M~~~L~nPrfem~m~s~dti~irWtLsg~lklPwA~~ggr  197 (332)
                      +..||  .+.++|++||.|.||..  .++|++++++.+ .+.+.+.+.++.....+++...+.|+...         + .
T Consensus        33 ~~~gD~~aL~~LlA~Dvv~~~P~~~~~~~G~~av~~~~~~~~~~~~~f~~~~~~~~g~~~~l~f~~~~---------~-g  102 (148)
T 3f8x_A           33 IAEADWERLPDLLAEDVVFSNPSTFDPYHGKGPLMVILPAVFSVLENFQYARHFSSKSGYVLEFNANM---------G-D  102 (148)
T ss_dssp             HHHTCGGGSGGGEEEEEEEECSSCSSCEESHHHHHHHHHHHHHHCEEEEEEEEEECSSEEEEEEEEEE---------T-T
T ss_pred             HHcCCHHHHHHHhCCCEEEECCCCCCCcCCHHHHHHHHHHHHhhCCCEEEEEEEEeCCeEEEEEEEEE---------C-C
Confidence            35566  59999999999999965  599999999999 88887743333334456677777776442         2 2


Q ss_pred             eEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          198 LIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       198 l~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      ..+.|...++||+ +|||.+.+-+|++-
T Consensus       103 ~~v~Gvdvl~~d~-dGkI~~~~~~~~P~  129 (148)
T 3f8x_A          103 ELLTGVDLIEFND-AGKITDLVVMMRPA  129 (148)
T ss_dssp             EEEEEEEEEEECT-TSCEEEEEEEEECH
T ss_pred             EEEEEEEEEEECC-CCcEEEEEEEEchH
Confidence            5689999999999 99999999999873

>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29

Probab=98.65  E-value=3.2e-07  Score=71.32  Aligned_cols=103  Identities=13%  Similarity=0.023  Sum_probs=76.6

Q ss_pred             HHHHHHHHH-HhCC--ccccccccceEeeCCcc--cccchHHHHHHH-HHhhhcCCCeEEE--EEecCCEEEEEEEEeee
Q 019996          115 QLVRDILEL-REGN--RALGTFAVSVKYKDPTR--SFTGREKYKRRL-WATTALDNPSVEM--VMLSTSVLSIKWTLRGK  186 (332)
Q Consensus       115 qL~~Di~~l-regn--rt~sIYApDV~FKDPFN--sFrGrerYkri~-~M~~~L~nPrfem--~m~s~dti~irWtLsg~  186 (332)
                      ++++...++ -.||  ...++|++|+.+.||-.  ..+|++.+++.+ .++.. .+.++++  ....++.+..+|++++.
T Consensus         7 ~~v~~~~~a~n~~D~~~~~~~~a~D~~~~~~~g~~~~~G~~ai~~~~~~~~~~-~~~~~~~~~~~~~gd~v~~~~~~~g~   85 (123)
T 2k54_A            7 LPVQKQLEAYNARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIERFKE-PDLYGELLTRVIVGNVVIDHETVTRN   85 (123)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHTEEEEEEEEETTTEEEEESHHHHHHHHHHHTTC-TTCEEEEEEEEEETTEEEEEEEEECC
T ss_pred             HHHHHHHHHHHhcCHHHHHhhcCCceEEEcCCCCcccCCHHHHHHHHHHHcCC-CCcEEEEEEEEEECCEEEEEEEEEeE
Confidence            333444434 3455  58899999999988754  489999999998 66665 4545544  33678999999999987


Q ss_pred             eCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC
Q 019996          187 PKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA  226 (332)
Q Consensus       187 lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~  226 (332)
                      .+      +++..+.+..-|++ . +|||++|.+|||...
T Consensus        86 ~~------~~~~~~~~~~vf~v-~-dGkI~~~~~~~d~~~  117 (123)
T 2k54_A           86 FP------EGKGEVDVACIYEV-E-NGRIAKAWFKIGEPR  117 (123)
T ss_dssp             BT------TBCCEEEEEEEEEE-E-TTEEEEEEEEEEEEE
T ss_pred             CC------CCceEEEEEEEEEE-E-CCEEEEEEEEcCChh
Confidence            44      44457899999999 4 699999999998653

>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}

Probab=98.62  E-value=7.7e-07  Score=76.78  Aligned_cols=108  Identities=16%  Similarity=0.272  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHH-HhCC--ccccccccceEeeCCcc----cccchHHHHHHH-HHhhhcCCCeE--EEEEec--CCEEEEE
Q 019996          113 ARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR----SFTGREKYKRRL-WATTALDNPSV--EMVMLS--TSVLSIK  180 (332)
Q Consensus       113 irqL~~Di~~l-regn--rt~sIYApDV~FKDPFN----sFrGrerYkri~-~M~~~L~nPrf--em~m~s--~dti~ir  180 (332)
                      ++++++.+.++ -.||  ...+++++||.|-+|-.    .++|+|+++..+ .+.+.+ +-++  +.+...  ++.+.++
T Consensus        12 ~~~~v~ry~~A~n~gD~d~l~~l~aeD~v~~~p~~~p~~~~~Greai~~~f~~~~~~~-d~~~~~e~i~v~~dG~~av~E   90 (156)
T 3g16_A           12 MEKVIRTYYDGCNEADEAKMIACFVPEAVHYFPAGMYGGAFRGAAQIAHRWRTAVETL-GSYWTIDALVIDAETAEAAIE   90 (156)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECBTTSTTSCEESHHHHHHHHHHHHHHH-CEEEEEEEEEEETTTTEEEEE
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHhcCCCEEEecCCCCCCCCccCHHHHHHHHHHHHhhc-CceEEEEEEEEecCCCEEEEE
Confidence            44444444444 4566  38999999999987652    579999999998 777776 4454  333344  8899999


Q ss_pred             EEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcH
Q 019996          181 WTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSP  229 (332)
Q Consensus       181 WtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv  229 (332)
                      ||++++.+        ...++|..-++||..+|||+++++||+..+..-
T Consensus        91 wt~~~T~~--------g~~~~~~~~f~f~~~DGKI~~~r~Y~~~~~~~~  131 (156)
T 3g16_A           91 WTHFKTNQ--------DKVLRGAECVEFDRASGLIREIRAFYASPQAEG  131 (156)
T ss_dssp             EEEEEGGG--------TEEEEEEEEEEEETTTTEEEEEEEEESCCCCTT
T ss_pred             EEEEEeCC--------CeeEecceEEEEEecCCEEEEEeeecCCccccC
Confidence            99998733        266889999999976899999999999987543

>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8

Probab=98.58  E-value=5.2e-07  Score=72.73  Aligned_cols=104  Identities=11%  Similarity=0.086  Sum_probs=74.5

Q ss_pred             HHHHHHHHHH-HhCC--ccccccccceEeeC-CcccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEEEeee
Q 019996          114 RQLVRDILEL-REGN--RALGTFAVSVKYKD-PTRSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWTLRGK  186 (332)
Q Consensus       114 rqL~~Di~~l-regn--rt~sIYApDV~FKD-PFNsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWtLsg~  186 (332)
                      +++++...+. ..||  ...++|++|+.|.+ |...++|++.+++.+ .+...+ +.++++.  ..+++.+.+.|...+.
T Consensus        18 ~~~v~~f~~a~~~gD~~~l~~l~a~D~v~~~~~~~~~~G~~~i~~~~~~~~~~~-~~~~~i~~~~~~g~~vv~~~~~~~~   96 (149)
T 2bng_A           18 IRAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQGRV-GFEVKIHRIGADGAAVLTERTDALI   96 (149)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTTEEEECHHHHHHHHHTTTTTC-EEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHcCCCEEEEeCCCCCccCHHHHHHHHHHHHhhc-CcEEEEEEEEEeCCEEEEEEEEEEE
Confidence            4444444444 4555  57899999999984 567899999999998 555544 4556543  2567777777765444


Q ss_pred             eCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC
Q 019996          187 PKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA  226 (332)
Q Consensus       187 lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~  226 (332)
                      ..      |..+.+.+.+.+++.  +|+|++++||||...
T Consensus        97 ~~------G~~~~~~~~~~~~v~--dGkI~~~~~y~D~~~  128 (149)
T 2bng_A           97 IG------PLRVQFWVCGVFEVD--DGRITLWRDYFDVYD  128 (149)
T ss_dssp             ET------TEEEEEEEEEEEEEE--TTEEEEEEEECCHHH
T ss_pred             EC------CeEEEEEEEEEEEEE--CCEEEEEEEEcChHH
Confidence            22      334678999999994  699999999999743

>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0

Probab=98.56  E-value=2.2e-07  Score=72.88  Aligned_cols=92  Identities=11%  Similarity=0.213  Sum_probs=73.5

Q ss_pred             ccccccccceEeeCCc-----ccccchHHHHH-HH-HHhhhcCCCeEEEE----EecCCEEEEEEEEeeeeCccccccCC
Q 019996          128 RALGTFAVSVKYKDPT-----RSFTGREKYKR-RL-WATTALDNPSVEMV----MLSTSVLSIKWTLRGKPKSIIANIGG  196 (332)
Q Consensus       128 rt~sIYApDV~FKDPF-----NsFrGrerYkr-i~-~M~~~L~nPrfem~----m~s~dti~irWtLsg~lklPwA~~gg  196 (332)
                      ...++|++||.|.+|-     ..++|++.+++ .+ .+...+.+.++++.    ..+++.+.++|+++++.+    +.|.
T Consensus        24 ~~~~l~a~D~~~~~~~~~p~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~v~~~~~~~~~----~tG~   99 (134)
T 3grd_A           24 HLAEALSEKVEWTEAEGFPYGGTYIGVEAIMENVFSRLGSEWNDYKASVNMYHEVSGKDVIIAEGMYSGVYK----DTGK   99 (134)
T ss_dssp             HHHHHEEEEEEEEECTTSTTCEEEESHHHHHHHTHHHHHHHEEEEEEEEEEEEEBTTSSEEEEEEEEEEEET----TTCC
T ss_pred             HHHHhcCCCeEEEecCCcccCcEEeCHHHHHHHHHHHHHhhccccccchhheeeecCCCEEEEEEEEeeEEC----CCCC
Confidence            4778999999999885     36899999985 56 66777777666443    357888999999999865    2255


Q ss_pred             ceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          197 DLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       197 rl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      .+.+++..-+++.  +|||+++++|||..
T Consensus       100 ~~~~~~~~v~~~~--dGkI~~~~~y~D~~  126 (134)
T 3grd_A          100 SFEAEFVHVWQLE--NGKIVKFKQYVDSH  126 (134)
T ss_dssp             EEEEEEEEEEEEE--TTEEEEEEEEECHH
T ss_pred             EeeeeEEEEEEEE--CCEEEEEEEEechH
Confidence            5779999999995  59999999999964

>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*

Probab=98.53  E-value=1.4e-06  Score=77.35  Aligned_cols=110  Identities=15%  Similarity=0.144  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHHHHhCC--ccccccccceEeeCCccc------ccchHHHHHHH-HHhhhcCCCeEE---EEE-ecCCE
Q 019996          110 ESTARQLVRDILELREGN--RALGTFAVSVKYKDPTRS------FTGREKYKRRL-WATTALDNPSVE---MVM-LSTSV  176 (332)
Q Consensus       110 E~tirqL~~Di~~lregn--rt~sIYApDV~FKDPFNs------FrGrerYkri~-~M~~~L~nPrfe---m~m-~s~dt  176 (332)
                      .+-.|+.++..++.+..|  +..++||+|+.+..|+..      ++|++.+++.+ ++...+.+.++.   ++. .+++.
T Consensus        40 ~~~nr~vV~~yl~~~~~D~~~~~eLfAeDav~e~P~~~~G~P~r~~GReai~~~~~~~~~~~~d~~~~~~~v~~taDpd~  119 (185)
T 3jum_A           40 RQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNW  119 (185)
T ss_dssp             HHHHHHHHHHHHHCCGGGGGGGGGGEEEEEEEEESCCTTSSCEEEESHHHHHHHHHHHHHHSTTCEEEEEEEECCSSTTE
T ss_pred             HHHHHHHHHHHHHHhccCHHHHHHhCCCCEEEEecCCCCCCCccccCHHHHHHHHHHHHhhCCCCeeeEEEEEEecCCCE
Confidence            344566666677766666  589999999999988754      89999999999 888888887772   232 47899


Q ss_pred             EEEEEEEeeeeCccccccCC---ceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          177 LSIKWTLRGKPKSIIANIGG---DLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       177 i~irWtLsg~lklPwA~~gg---rl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      +.++|+.+++....    |-   ....+...-+++.+  |||++++||||..
T Consensus       120 VvvE~~~~Gtv~~T----Gkp~~~Y~~~yi~V~rVrD--GKIv~~ReY~Dpl  165 (185)
T 3jum_A          120 FWVECRGEGAIVFP----GYPRGQYRNHFLHSFRFEN--GLIKEQREFMNPC  165 (185)
T ss_dssp             EEEEEEEEEEECCT----TSCCEEEEEEEEEEEEEET--TEEEEEEEEECHH
T ss_pred             EEEEEEEEEEEcCC----CCccceEEEeEEEEEEEEC--CEEEEEEEecCHH
Confidence            99999999976521    21   26688888899975  9999999999963

>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11

Probab=98.49  E-value=1.8e-06  Score=70.06  Aligned_cols=104  Identities=18%  Similarity=0.181  Sum_probs=75.3

Q ss_pred             HHHHHHHHHH-HhCC--ccccccccceEeeCCccc-----ccchHHHHHHH-HHhhhcC-CCeEEEE--EecCC-EEEEE
Q 019996          114 RQLVRDILEL-REGN--RALGTFAVSVKYKDPTRS-----FTGREKYKRRL-WATTALD-NPSVEMV--MLSTS-VLSIK  180 (332)
Q Consensus       114 rqL~~Di~~l-regn--rt~sIYApDV~FKDPFNs-----FrGrerYkri~-~M~~~L~-nPrfem~--m~s~d-ti~ir  180 (332)
                      +++++...++ -.||  ...++|++|+.|.+|...     ++|++.+++.+ .+..... +.++++.  ..+++ .+.+.
T Consensus        32 ~~~v~~~~~a~~~gD~~~l~~l~a~D~~~~~~~~~~~~g~~~G~~~i~~~~~~~~~~~~~~~~~~i~~~~~~gd~~v~~~  111 (156)
T 1tuh_A           32 AETVRRGYAAFNSGDMKTLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRYGGETGGTFKAVLLHVLKSDDGRVIGI  111 (156)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHHHHTTTTCCEEEEEEEEECTTSCEEEE
T ss_pred             HHHHHHHHHHHhCCCHHHHHHhcCCCEEEEccCCCCccceEcCHHHHHHHHHHHHhhcCCceEEEEEEEEEcCCCEEEEE
Confidence            3344444333 4455  578999999999999863     79999999988 6544443 5556443  25777 89999


Q ss_pred             EEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          181 WTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       181 WtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      |++ +..+    + |..+.+.+...+++.  +|||+++.+|||..
T Consensus       112 ~~~-~~~~----~-G~~~~~~~~~~~~~~--dGkI~~~~~~~D~~  148 (156)
T 1tuh_A          112 HRN-TAER----G-GKRLDVGCCIVFEFK--NGRVIDGREHFYDL  148 (156)
T ss_dssp             EEE-EEEE----T-TEEEEEEEEEEEEEE--TTEEEEEEEEESSH
T ss_pred             EEE-EEec----C-CcEEeeeeEEEEEEE--CCEEEEEEEecCCH
Confidence            999 5533    1 334679999999994  59999999999964

>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}

Probab=98.40  E-value=6.7e-06  Score=68.13  Aligned_cols=115  Identities=11%  Similarity=0.082  Sum_probs=89.4

Q ss_pred             eeecchhHHHHHHHHHHHHHH-HH-hCC--ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEE--EecC
Q 019996          102 ECISSPLVESTARQLVRDILE-LR-EGN--RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMV--MLST  174 (332)
Q Consensus       102 ~C~SSp~VE~tirqL~~Di~~-lr-egn--rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~--m~s~  174 (332)
                      .-.+=+..++.-++|+++..+ +. .||  ...++|++|+.+-+|.. -.|++.+++.+ .+...+.+.++++.  ..++
T Consensus        18 ~~~~~~~~~~~nk~lV~~f~~~a~~~~D~~~~~~~~a~D~v~h~P~~-~~G~e~~~~~~~~~~~~~pd~~~~i~~iiaeG   96 (148)
T 3g0k_A           18 QGMARTAEEQANHDLVIEMYNKVLIAMDSSAVDRYIAPGYVQHSSLA-EPSVEALKGFLDRVRAESPDARQTIHRSFVDG   96 (148)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHTTTTTCGGGGGGTEEEEEEECCSSS-CSSHHHHHHHHHHHHHHCCSCEEEEEEEEEET
T ss_pred             cCCCCcccHHHHHHHHHHHHHHHHhcCCHHHHHHhcCcCeEEcCCCC-CCCHHHHHHHHHHHHHhCCCceEEEEEEEEEC
Confidence            334445677788888888888 54 355  48899999999999965 59999999998 77778888888654  3688


Q ss_pred             CEEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCC
Q 019996          175 SVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSAS  227 (332)
Q Consensus       175 dti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~  227 (332)
                      +.+.++|++++. +      +| ..+.|+.-+++.  +|+|++|-|.++.-+.
T Consensus        97 D~V~~~~~~~~~-~------~g-~~~~~~difr~~--dGkIvEhWd~~q~~p~  139 (148)
T 3g0k_A           97 DHVITHTHVERW-P------GD-AGLAVVDIFRVE--GGMIVEHWDVIQDVPA  139 (148)
T ss_dssp             TEEEEEEEEECS-T------TC-CCEEEEEEEEEE--TTEEEEEEEEEEECCS
T ss_pred             CEEEEEEEEEEC-C------CC-ccEEEEEEEEEE--CCEEEEEcccccccCC
Confidence            999999999852 1      44 367899999997  5999999888876554

>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10

Probab=98.34  E-value=1.6e-05  Score=64.52  Aligned_cols=114  Identities=12%  Similarity=0.144  Sum_probs=86.5

Q ss_pred             chhHHHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCcc----cccchHHHHHHH-HHhhhcC-CCeEE-EE--Eec
Q 019996          106 SPLVESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR----SFTGREKYKRRL-WATTALD-NPSVE-MV--MLS  173 (332)
Q Consensus       106 Sp~VE~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFN----sFrGrerYkri~-~M~~~L~-nPrfe-m~--m~s  173 (332)
                      ++..-++++++.+...++ ..||  ...+++++|+.+..|..    .++|++++++.+ .+.+.+. ..+++ ++  ..+
T Consensus         7 ~~~~~~~~~~~~~~f~~A~~~gD~~~l~~lla~D~v~~~pg~~~~g~~~G~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~   86 (134)
T 3dmc_A            7 SDNTLKVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGEFHGLNVGKERAKEFFTYVSESFHTGIQISSLDRVTSN   86 (134)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHSCCHHHHTTEEEEEEEEESSGGGBEEEESHHHHHHHHHHHHHTCTTCEEEEEEEEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCHHHHHHHcCCCEEEEecCCCCCccchhHHHHHHHHHHHHHhhcCCceeEEEEEEEec
Confidence            455556777777777655 5677  58999999999999987    689999999988 7777665 34555 54  367


Q ss_pred             CCEEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCC
Q 019996          174 TSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSAS  227 (332)
Q Consensus       174 ~dti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~  227 (332)
                      ++.+-+.|+..++.+      +.++.......+++.  +|||++.+||||.-..
T Consensus        87 G~~vvve~~~~g~~~------g~~y~~~~~~~f~v~--dGkI~~~r~Y~d~~~~  132 (134)
T 3dmc_A           87 ETTVVFEFRDEGLFL------GKPYKNRVAVSFDVR--GDKICSYREYFGSDGK  132 (134)
T ss_dssp             SSEEEEEEEEEEEET------TEEEEEEEEEEEEEE--TTEEEEEEEEECSCSB
T ss_pred             CCEEEEEEEEEEEEc------CcEeeccEEEEEEEE--CCEEEEEEEEECCCCC
Confidence            899999999999865      323445666777775  5999999999996543

>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}

Probab=98.27  E-value=3.4e-05  Score=58.81  Aligned_cols=115  Identities=9%  Similarity=0.039  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHHHHH-hCC--ccccccccceEeeCCc-ccccchHHHHHHH-HHhhhcCCCeEEE----EEecCCEEEE
Q 019996          109 VESTARQLVRDILELR-EGN--RALGTFAVSVKYKDPT-RSFTGREKYKRRL-WATTALDNPSVEM----VMLSTSVLSI  179 (332)
Q Consensus       109 VE~tirqL~~Di~~lr-egn--rt~sIYApDV~FKDPF-NsFrGrerYkri~-~M~~~L~nPrfem----~m~s~dti~i  179 (332)
                      +++.|+++.+...+.. .||  ...++|++|+.|-+|. ..++|++.+++.+ .++.. ..+++++    ...+++.+.+
T Consensus         4 ~~~~I~~~~~~~~~a~~~~D~~~~~~l~a~Da~~~~~~~~~~~G~~~i~~~~~~~~~~-~~~~~~~~~~~v~~~gd~A~~   82 (129)
T 3hx8_A            4 AKEAIEAANADFVKAYNSKDAAGVASKYMDDAAAFPPDMARVDGRQNIQKLWQGAMDM-GISELKLTTLDVQESGDFAFE   82 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHHHT-TCEEEEEEEEEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHcCCHHHHHHhhCCCeEEeCCCCCcccCHHHHHHHHHHHHhC-CCceEEEEEEEEEcCCCEEEE
Confidence            5667777777777764 444  4889999999999985 4689999999988 55543 2244422    2267888888


Q ss_pred             EEEEeeeeCccccccCCceEEeeeeEEEEeCC-CCcEEEEeeeccCCCC
Q 019996          180 KWTLRGKPKSIIANIGGDLIVKVYSKFTLNQI-SGQVIEHEELWDLSAS  227 (332)
Q Consensus       180 rWtLsg~lklPwA~~ggrl~I~G~Se~~LN~i-sGlVvsHiDyWD~S~~  227 (332)
                      +|++++..+.+  . |..+.+.|..+..+--. +|+..-+.|+|+..+.
T Consensus        83 ~~~~~~~~~~~--~-G~~~~~~g~~~~v~~r~~dG~W~i~~~~~~~~~~  128 (129)
T 3hx8_A           83 SGSFSLKAPGK--D-SKLVDAAGKYVVVWRKGQDGGWKLYRDIWNSDPA  128 (129)
T ss_dssp             EEEEEEEEECT--T-SCEEEEEEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred             EEEEEEEeeCC--C-CCeeeeeEEEEEEEEECCCCcEEEEEeecccccc
Confidence            86665554322  1 33344667666666554 8999999999998764

>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}

Probab=98.18  E-value=2.9e-05  Score=67.81  Aligned_cols=110  Identities=14%  Similarity=0.216  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHHHHHHHhCCc--cccccccceE---ee-CC--cccccchHHHHHHH-HHhhhcCCCeE---EEEE-ecCC
Q 019996          109 VESTARQLVRDILELREGNR--ALGTFAVSVK---YK-DP--TRSFTGREKYKRRL-WATTALDNPSV---EMVM-LSTS  175 (332)
Q Consensus       109 VE~tirqL~~Di~~lregnr--t~sIYApDV~---FK-DP--FNsFrGrerYkri~-~M~~~L~nPrf---em~m-~s~d  175 (332)
                      .++-=|++++.++++..+|.  ..++|++|+.   +. +|  -..++|++.+++.+ ++...+.+.++   .++. .+++
T Consensus        17 ~r~~Nr~vV~~~l~~~~~D~~~~~~LfAeD~v~~~~e~~~G~P~~~~Gre~l~~~~~~~~~~~~~~~~~~~~i~~t~Dpd   96 (163)
T 3ff0_A           17 LRRKNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPN   96 (163)
T ss_dssp             HHHHHHHHHHHHHTCCGGGGGGGGGGEEEEEEEEESSCSSSSCEEEESHHHHHHHHHHHHHHSTTCEEEEEEEEEBSSTT
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHHHhcCCcccceeeEECCCCCcceecHHHHHHHHHHHHhhCCCceeeeEEEEEcCCCC
Confidence            45555777777777777775  7999999999   76 22  22489999999998 98888888777   3444 4678


Q ss_pred             EEEEEEEEeeeeCccccccCCc---eEEeeeeEEEEeCCCCcEEEEeeeccC
Q 019996          176 VLSIKWTLRGKPKSIIANIGGD---LIVKVYSKFTLNQISGQVIEHEELWDL  224 (332)
Q Consensus       176 ti~irWtLsg~lklPwA~~ggr---l~I~G~Se~~LN~isGlVvsHiDyWD~  224 (332)
                      ++.++|+.+++.+..    |..   ......+-+++-+  |+|++.+||||.
T Consensus        97 ~vvvE~~~~g~i~~t----G~~~~~y~~~yi~v~~vrd--GkI~~~ReY~dp  142 (163)
T 3ff0_A           97 HFWVECDGHGKILFP----GYPEGYYENHFLHSFELDD--GKIKRNREFMNV  142 (163)
T ss_dssp             EEEEEEEEEEEECCT----TSCCEEEEEEEEEEEEEET--TEEEEEEEEECH
T ss_pred             EEEEEEEEEEEEcCC----CcccccEEEeEEEEEEEeC--CEEEEEEeecCH
Confidence            999999999987622    334   6678888888855  999999999996

>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20

Probab=98.08  E-value=7.8e-05  Score=60.00  Aligned_cols=102  Identities=11%  Similarity=0.156  Sum_probs=72.4

Q ss_pred             HHHHHHHHHHHHH-hCC--ccccccccceEeeCCcc--cccchHHHHHHHHHhhhcCCCe-EEEE--EecCCEEEEEEEE
Q 019996          112 TARQLVRDILELR-EGN--RALGTFAVSVKYKDPTR--SFTGREKYKRRLWATTALDNPS-VEMV--MLSTSVLSIKWTL  183 (332)
Q Consensus       112 tirqL~~Di~~lr-egn--rt~sIYApDV~FKDPFN--sFrGrerYkri~~M~~~L~nPr-fem~--m~s~dti~irWtL  183 (332)
                      ..|++++.+.+++ .||  ...++|++|+.+..|..  .++|++.|.+++--+.  .... +++.  ..+++.+.+.|++
T Consensus         6 ~~~~~v~~~~~a~~~~D~~~l~~llaeD~v~~~P~~~~~~~Gr~~~~~~~~~~~--~~~~~~~i~~~~a~G~~vv~~~~~   83 (128)
T 3en8_A            6 KIREALNAHWQASAAGDFDAEHDIYDDDAICDYPQSGERILGRMNLQALRSHHP--GKPAGFEVRRIQGEGNLWITEYSI   83 (128)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHTTTEEEEEEEEETTTTEEEESHHHHHHHHHHTT--CSCSEEEEEEEEEETTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEECCCCCCEEECHHHHHHHHHHCC--CCCcceEEEEEEECCCEEEEEEEE
Confidence            3455555555553 444  48899999999999863  5899999998751111  2223 5443  3678899999988


Q ss_pred             eeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCC
Q 019996          184 RGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSAS  227 (332)
Q Consensus       184 sg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~  227 (332)
                      ..         +| ..+.+.+-+++.  +|||++++||||-...
T Consensus        84 ~~---------~g-~~~~~~~v~~v~--dGkI~~~~~y~~~~~~  115 (128)
T 3en8_A           84 SY---------NG-RPAYTVSIMEFR--NGKVVHETQYFSDPFE  115 (128)
T ss_dssp             EE---------TT-EEEEEEEEEEEE--TTEEEEEEEEEECCCC
T ss_pred             ec---------CC-EEEEEEEEEEEc--CCEEEEEEEeCCCCCC
Confidence            63         23 567788999997  5999999999995543

>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}

Probab=98.02  E-value=5.7e-05  Score=58.40  Aligned_cols=98  Identities=9%  Similarity=0.089  Sum_probs=73.7

Q ss_pred             HHHHHHHHHH-hCC--ccccccccceEeeCC--cccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEEEeee
Q 019996          115 QLVRDILELR-EGN--RALGTFAVSVKYKDP--TRSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWTLRGK  186 (332)
Q Consensus       115 qL~~Di~~lr-egn--rt~sIYApDV~FKDP--FNsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWtLsg~  186 (332)
                      ++++.+.+++ .||  ...++|++|+.+-+|  -...+|++.+++.+ .++..+.+.+++++  ..+++.+.++|++++.
T Consensus         6 ~~v~~~~~a~n~~D~~~~~~~~a~D~v~h~~~~~~~~~G~~~~~~~~~~~~~~~p~~~~~i~~~~~~Gd~V~~~~~~~~~   85 (117)
T 3ff2_A            6 ETAKAMIAAYNAQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFARWPQNHAEIKDAQQVGTYVLMREHVTRG   85 (117)
T ss_dssp             HHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTSCEEECHHHHHHHHHHHHHHHCTTCEEEEEEEEEETTEEEEEEEEECC
T ss_pred             HHHHHHHHHHcccCHHHHHHhcCCcEEEEeCCCCccccCHHHHHHHHHHHHhhCCCceEEEEEEEEECCEEEEEEEEEec
Confidence            4444555543 333  467899999999997  45689999999998 77777777777664  3688999999999987


Q ss_pred             eCccccccCCc---eEEeeeeEEEEeCCCCcEEEEe
Q 019996          187 PKSIIANIGGD---LIVKVYSKFTLNQISGQVIEHE  219 (332)
Q Consensus       187 lklPwA~~ggr---l~I~G~Se~~LN~isGlVvsHi  219 (332)
                      +.    . .|+   ..+.+..-|++ . +|||++|-
T Consensus        86 ~~----~-~G~~~~~~~~~~~ifr~-~-dGkI~e~W  114 (117)
T 3ff2_A           86 PA----T-DGSPLVEPFDVVAVYSF-E-GDKCSRVE  114 (117)
T ss_dssp             SC----S-SSCCCCCCEEEEEEEEE-E-TTEEEEEE
T ss_pred             CC----C-CCCcccccEEEEEEEEE-E-CCEEEEEE
Confidence            32    1 343   56888999999 4 79999984

>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}

Probab=97.97  E-value=6.4e-05  Score=64.83  Aligned_cols=91  Identities=18%  Similarity=0.263  Sum_probs=71.4

Q ss_pred             HHhCC--ccccccccceEeeCC--cccccchHHHHHHH-HHhhhcCCCeEEEEEecCCEEEEEEEEeeeeCccccccCCc
Q 019996          123 LREGN--RALGTFAVSVKYKDP--TRSFTGREKYKRRL-WATTALDNPSVEMVMLSTSVLSIKWTLRGKPKSIIANIGGD  197 (332)
Q Consensus       123 lregn--rt~sIYApDV~FKDP--FNsFrGrerYkri~-~M~~~L~nPrfem~m~s~dti~irWtLsg~lklPwA~~ggr  197 (332)
                      +.+||  .+.++|++||.|.+|  .+.++|+++..+.+ .+.+.+.+.++.....+++.+.+.|+.+.         + .
T Consensus        31 ~~~gD~~aL~~LlA~Dvv~~sP~~~~p~~Gr~av~~~l~~~~~~~~df~~~~~~v~G~~avl~f~~~~---------~-g  100 (155)
T 3flj_A           31 VAKGDESLIHALLAEDVRFMPPTYYKTWTGRDPVAAVLGHVGQVFSEFRYRRIMGEGKDWALEFQCKV---------G-E  100 (155)
T ss_dssp             HTTTCHHHHHTTEEEEEEEECSSSSCCEESHHHHHHHHHHHHHHEEEEEEEEEEEETTEEEEEEEEEE---------T-T
T ss_pred             HHhCCHHHHHHhcCCCEEEECCCCCCCcCCHHHHHHHHHHHHhhCCCcEEEEEEEcCCEEEEEEEEEE---------C-C
Confidence            35555  489999999999999  56899999999998 77777765555444567888888887543         2 3


Q ss_pred             eEEeeeeEEEEeCCCCcEEEEeeeccC
Q 019996          198 LIVKVYSKFTLNQISGQVIEHEELWDL  224 (332)
Q Consensus       198 l~I~G~Se~~LN~isGlVvsHiDyWD~  224 (332)
                      ..|+|...++||+ +|+|.++.=-+++
T Consensus       101 ~~v~gvd~~~fde-dGkI~e~~vm~rP  126 (155)
T 3flj_A          101 LDAVGVDLITLNE-GGLIQDFEVVMRP  126 (155)
T ss_dssp             EEEEEEEEEEECT-TSSEEEEEEEEEC
T ss_pred             EEEEEEEEEEEcC-CCCEEEEEEEECh
Confidence            5789999999999 9999998755543

>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}

Probab=97.76  E-value=0.00076  Score=52.33  Aligned_cols=98  Identities=8%  Similarity=0.072  Sum_probs=75.9

Q ss_pred             HHHHHHH-HhCC--ccccccccceEeeCC-cccccchHHHHHHH-HHhhhcCCCeEEEEE--ecCCEEEEEEEEeeeeCc
Q 019996          117 VRDILEL-REGN--RALGTFAVSVKYKDP-TRSFTGREKYKRRL-WATTALDNPSVEMVM--LSTSVLSIKWTLRGKPKS  189 (332)
Q Consensus       117 ~~Di~~l-regn--rt~sIYApDV~FKDP-FNsFrGrerYkri~-~M~~~L~nPrfem~m--~s~dti~irWtLsg~lkl  189 (332)
                      ++++.++ -.||  ...+++++||.+.-| -....|++++++.+ .|......++++++.  .+++.+-++|++.+..+ 
T Consensus         6 v~~~~~a~~~gD~~~~~~~ladDv~w~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~i~~Gd~Vvv~~~~~~~~~-   84 (112)
T 3f14_A            6 HYSIAQHFSSGDFPAVYACFNDIIEWNIIGNQVVKGKADVIDFCNKMLPEMKGAVLTNDNVIQNENQIVIEGKCRYFDA-   84 (112)
T ss_dssp             HHHHHHHHHTTCGGGTGGGEEEEEEEEETTTEEEESHHHHHHHHHHHHHHHHTSEEEEEEEEECSSEEEEEEEEEEECT-
T ss_pred             HHHHHHHHHcCCHHHHHHhcCCceEEEEcCCccEecHHHHHHHHHHHHhhcCCcEEEEEEEEEeCCEEEEEEEEEEEeC-
Confidence            3333333 4455  478999999988754 45689999999998 787777677886643  68899999999998765 


Q ss_pred             cccccCCceEEeeeeEEEEeCCCCcEEEEeee
Q 019996          190 IIANIGGDLIVKVYSKFTLNQISGQVIEHEEL  221 (332)
Q Consensus       190 PwA~~ggrl~I~G~Se~~LN~isGlVvsHiDy  221 (332)
                         . +.++...+..-++|.  +|||++-++|
T Consensus        85 ---~-g~~~~~~~~~vf~~~--dGkI~e~~~Y  110 (112)
T 3f14_A           85 ---E-GKEAFVSYCDIYRFE--NDTIKTITSY  110 (112)
T ss_dssp             ---T-SCEEEEEEEEEEEEE--TTEEEEEEEE
T ss_pred             ---C-CCEEEEEEEEEEEEe--CCEEEEEEEE
Confidence               2 455778899999996  5999999987

>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}

Probab=97.54  E-value=0.00079  Score=53.34  Aligned_cols=100  Identities=15%  Similarity=0.262  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHH-HhCC--ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEEEecCCEEEEEEEEeeee
Q 019996          112 TARQLVRDILEL-REGN--RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMVMLSTSVLSIKWTLRGKP  187 (332)
Q Consensus       112 tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~m~s~dti~irWtLsg~l  187 (332)
                      +-|++++...+. .+||  .+.++++|||.|..|....+|++++.+.+ .+.+   ...++.....++.+.+.|+.... 
T Consensus         7 ~~~~~v~~f~~A~~~gD~~~l~~lla~Dvv~~~~~g~~~G~~~v~~~~~~~~~---~~~~~~~~~~G~~v~~~~~~~~~-   82 (114)
T 3f40_A            7 TTRDLVLEFIHALNTENFPAAKKRLNENFTFNGPMGHREGSERYMNDMEKMKF---KYVVHKMFEEGNDVCLIYDINMN-   82 (114)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEEETTEEEESHHHHHHHHHHHCC---EEEEEEEEEETTEEEEEEEEEET-
T ss_pred             cHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEECCCCcccCHHHHHHHHHHHHh---heEEEEEEecCCcEEEEEEEecC-
Confidence            445566666555 6666  48999999999999999999999999987 4433   22223334567777777776532 


Q ss_pred             CccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC
Q 019996          188 KSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA  226 (332)
Q Consensus       188 klPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~  226 (332)
                             ++.  +.+...+++.  +|||.+..+|||+.+
T Consensus        83 -------g~~--~~~~~~~~v~--dGrI~~i~~~~dp~~  110 (114)
T 3f40_A           83 -------GKT--IAASGLYHLE--KGEITSLHVYFDPRP  110 (114)
T ss_dssp             -------TEE--EEEEEEEEEE--TTEEEEEEEECCCGG
T ss_pred             -------CcE--eecceEEEEc--CCeEEEEEEEECChh
Confidence                   222  4555556663  699999999999865

>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}

Probab=97.29  E-value=0.0096  Score=48.22  Aligned_cols=114  Identities=13%  Similarity=0.050  Sum_probs=75.4

Q ss_pred             chhHHHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCcc--cccchHHHHHHH-HHhhhcCCCeE---EEEEecCCE
Q 019996          106 SPLVESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR--SFTGREKYKRRL-WATTALDNPSV---EMVMLSTSV  176 (332)
Q Consensus       106 Sp~VE~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFN--sFrGrerYkri~-~M~~~L~nPrf---em~m~s~dt  176 (332)
                      +..-|+-|+++...+.+. -.||  ...++|++|+.|-+|..  .++|++.++..+ .++.......+   +++..+++.
T Consensus        15 ~~~d~~~I~~~~~~~~~A~~~~D~~~l~~l~a~Dav~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~i~~~~i~~~~gd~   94 (156)
T 3h51_A           15 ADGEAREVAALFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRASREQIENYFEMFLTKKPKGVINYRTVRLLDDDS   94 (156)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEECSSCSSCBCSHHHHHHHHHHHGGGCCEEEEEEEEEEECSSSE
T ss_pred             CCCCHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHhhCCCCcccceEEEEecCCe
Confidence            445566677777777666 4555  58899999999999763  479999999998 55555443333   333457889


Q ss_pred             EEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCC--cEEEEeeec
Q 019996          177 LSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISG--QVIEHEELW  222 (332)
Q Consensus       177 i~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isG--lVvsHiDyW  222 (332)
                      +...|++++....+  . |....+.|.-+..+-..+|  +|+.|-=+.
T Consensus        95 A~~~~~~~~~~~~~--~-G~~~~~~~r~t~v~~r~dG~WkIv~~H~S~  139 (156)
T 3h51_A           95 AVDAGVYTFTLTDK--N-GKKSDVQARYTFVYEKRDGKWLIINHHSSA  139 (156)
T ss_dssp             EEEEEEEEEEEECT--T-SCEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             EEEEEEEEEEEEcC--C-CCeEEEEeEEEEEEEEECCEEEEEEEeecC
Confidence            88888877654311  1 3234566766666665577  777654443

>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*

Probab=97.19  E-value=0.0068  Score=52.86  Aligned_cols=109  Identities=17%  Similarity=0.246  Sum_probs=75.4

Q ss_pred             HHHHHHHHHHHhC-C--ccccccccceEeeCCc--ccccchHHHHHHH-HHhhhcCCCeE-EEEE-ecCCEEEE--EEEE
Q 019996          114 RQLVRDILELREG-N--RALGTFAVSVKYKDPT--RSFTGREKYKRRL-WATTALDNPSV-EMVM-LSTSVLSI--KWTL  183 (332)
Q Consensus       114 rqL~~Di~~lreg-n--rt~sIYApDV~FKDPF--NsFrGrerYkri~-~M~~~L~nPrf-em~m-~s~dti~i--rWtL  183 (332)
                      .|||--+.++.+. |  -+.+.|..|-.|.|-.  .+.+|..-+.+-+ ..-+-+.+=.| ..|| .+++.+.+  ..++
T Consensus        23 qqlA~~Yi~AlT~hDy~~L~~FynrdsVf~D~ta~~~YtG~r~Ii~Fl~RaH~gvLey~fnieHmfnsGsLVVmiGnY~~  102 (154)
T 3gzb_A           23 QQLAVKYMDALTEHDYKTLITFYNRDSIFFDKTANRKYTGGRFIIDFLERAHQGVLEYDFNIEHMYNAGSLVVMIGNYHF  102 (154)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHTTCCTTCEEEETTTTEEEESHHHHHHHHHHHTTTCCCCEEEEEEEEEETTEEEEEEEEEE
T ss_pred             HHHHHHHHHHHhccCHHHHHHHhCccceeeeeccCcceeCcHHHHHHHHHHhhhheeeccChhhhccCCcEEEEEcceee
Confidence            3677666666665 4  3789999999999976  5789998877766 44455556666 4577 66665533  3445


Q ss_pred             eeeeCccccccCCce---EEeeeeEEEEeCCCCcEEEEeeeccC
Q 019996          184 RGKPKSIIANIGGDL---IVKVYSKFTLNQISGQVIEHEELWDL  224 (332)
Q Consensus       184 sg~lklPwA~~ggrl---~I~G~Se~~LN~isGlVvsHiDyWD~  224 (332)
                      +|.....-  --|+|   .|+|.|+++||...-||.+|+|+||-
T Consensus       103 kGPg~qfg--kpGkiId~aiPGVTtlklDm~~~Rv~eh~DlmDy  144 (154)
T 3gzb_A          103 KGPGEQFG--KPGKIIDVAIPAVTSLKLDMLNRRVTEHVDLIDY  144 (154)
T ss_dssp             EEEEGGGT--EEEEEEEEEEEEEEEEEEETTTTEEEEEEEEECH
T ss_pred             cCchHHcC--CCCceEEEecCceEEEeecCCccchhhhHhHHhH
Confidence            55444221  11233   39999999999944499999999994

>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27

Probab=97.17  E-value=0.0097  Score=45.55  Aligned_cols=111  Identities=9%  Similarity=0.041  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCcc-cccchHHHHHHH-HHhhhcC-CCeEEEE---EecCCEEEEE
Q 019996          110 ESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR-SFTGREKYKRRL-WATTALD-NPSVEMV---MLSTSVLSIK  180 (332)
Q Consensus       110 E~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFN-sFrGrerYkri~-~M~~~L~-nPrfem~---m~s~dti~ir  180 (332)
                      ++.|+++.+...++ -.||  ...++|++|+.|-+|-. .++|++.+++.+ .++..+. +..+++.   ..+++.+..+
T Consensus        10 ~~~i~~~~~~~~~a~~~~D~~~~~~l~a~D~v~~~~~~~~~~G~~ai~~~~~~~~~~~~~~~~~~~~~i~~~~gd~a~~~   89 (135)
T 3d9r_A           10 LAVIEAAAIAYLTAFNRADIPAVIATYTDDGVLMGPGRPAAVGKDELAEVYLSVFETVGFDMAYEIKEVVQTSADWAFVR   89 (135)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTSCCEESHHHHHHHHHHHHHHEEEEEEEEEEEEEEEETTEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCcccCHHHHHHHHHHHHhhcCCceeEEEEEEEEecCCEEEEE
Confidence            34466666666655 4565  58899999999998865 467999999998 5554332 3344332   2278999999


Q ss_pred             EEEeeeeCccccccCCceEEeeeeE--EEEeCCCCcEEEEeeecc
Q 019996          181 WTLRGKPKSIIANIGGDLIVKVYSK--FTLNQISGQVIEHEELWD  223 (332)
Q Consensus       181 WtLsg~lklPwA~~ggrl~I~G~Se--~~LN~isGlVvsHiDyWD  223 (332)
                      |++.+....+  ..+..+...|..+  ++..+ +|+-.-..++|.
T Consensus        90 ~~~~~~~~~~--~~g~~~~~~~~~~~v~~~~~-dG~W~i~~~~~s  131 (135)
T 3d9r_A           90 SATEGTETNK--ATGVVTPAAYQELFLLRKSA-TGSWQTARYCTS  131 (135)
T ss_dssp             EEEEEEEEET--TTCCEEEEEEEEEEEEEECT-TSCEEEEEEEEE
T ss_pred             EEEEEEEecC--CCCCceeecccEEEEEEecC-CCcEEEEEEeec
Confidence            9988764322  1122233344444  44443 676655666664

>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16

Probab=96.94  E-value=0.0069  Score=48.69  Aligned_cols=100  Identities=13%  Similarity=0.152  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCcccccchHHHHH-HH-HHhhhcCCCeEEE---E-EecCCEEEEE
Q 019996          110 ESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPTRSFTGREKYKR-RL-WATTALDNPSVEM---V-MLSTSVLSIK  180 (332)
Q Consensus       110 E~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFNsFrGrerYkr-i~-~M~~~L~nPrfem---~-m~s~dti~ir  180 (332)
                      |+.|+++.+...++ ..||  ...++|++|+.+-+|....+|++.|++ .. -.+..+..+.+++   + ...++.+.+.
T Consensus        29 ~~~i~~~~~~~~~A~~~~D~~~l~~l~a~Da~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~gd~A~~~  108 (148)
T 3bb9_A           29 DSAAGNVVKQFHAALQMGNEAIVRQSLAANVQIYEGGKVERSLTEYANHHMLADMAYLKGLTITPKEHQITITGDIAIST  108 (148)
T ss_dssp             TSHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTEEECSHHHHHHTHHHHHHHHHHTEEEEEEEEEEEEETTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHhhCCCeEEEeCCCccCCHHHHHHHhHHHHHHhccCceEEeeeEEEEEcCCEEEEE
Confidence            34444444444333 5566  588999999987787777999999999 54 3334455566633   2 2568899888


Q ss_pred             EEEeeeeCccccccCCceEEeeeeEEEE-eCCCC
Q 019996          181 WTLRGKPKSIIANIGGDLIVKVYSKFTL-NQISG  213 (332)
Q Consensus       181 WtLsg~lklPwA~~ggrl~I~G~Se~~L-N~isG  213 (332)
                      |+........    |..+...|..++.| =.++|
T Consensus       109 ~~~~~~~~~~----G~~~~~~~r~T~v~~~k~~g  138 (148)
T 3bb9_A          109 SISHAQGEYK----GKSIDSMTMETLVLIKQADG  138 (148)
T ss_dssp             EEEEEEECCC------CEEEEEEEEEEEEECTTS
T ss_pred             EEEEEeeeeC----CcccccceEEEEEEeEEcCC
Confidence            8877654321    33455677777777 44344

>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}

Probab=96.82  E-value=0.032  Score=43.97  Aligned_cols=82  Identities=18%  Similarity=0.283  Sum_probs=59.0

Q ss_pred             hhHHHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCc--ccccchHHHHHHH-HHhhhcC-CCeEEEE----EecCC
Q 019996          107 PLVESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPT--RSFTGREKYKRRL-WATTALD-NPSVEMV----MLSTS  175 (332)
Q Consensus       107 p~VE~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPF--NsFrGrerYkri~-~M~~~L~-nPrfem~----m~s~d  175 (332)
                      ..-|+-|++|.....++ ..||  ...++|++|+.+-+|.  ..++|++.|++.+ .++..+. ..++++.    ..+++
T Consensus         4 ~~~~~~I~~l~~~~~~A~~~~D~~~~~~l~a~D~v~~~~~~~~~~~G~~air~~~~~~~~~~~~~~~~~~~~~~v~~~gd   83 (142)
T 3f7s_A            4 TAAESEIRQLIERWMQAVRDRDIPGIIAPYADDIVAFDAIQALQFKGKSAYTAHWEMCMGMCTGPMVFELAQLTVHAAGD   83 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECSSSSSCEESHHHHHHHHHHHHHTCCSCEEEEEEEEEEEEETT
T ss_pred             hhhHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHHhCCCceEEEEeeeEEEEcCC
Confidence            45677788888888766 5666  4789999999988775  3467999999987 5556554 3445332    25788


Q ss_pred             EEEEEEEEeeeeC
Q 019996          176 VLSIKWTLRGKPK  188 (332)
Q Consensus       176 ti~irWtLsg~lk  188 (332)
                      .+...++.+....
T Consensus        84 ~A~~~~~~~~~~~   96 (142)
T 3f7s_A           84 LALAHWLNRCGPG   96 (142)
T ss_dssp             EEEEEEEEEEEES
T ss_pred             EEEEEEEEEEeee
Confidence            9888887766544

>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22

Probab=96.73  E-value=0.014  Score=46.40  Aligned_cols=114  Identities=9%  Similarity=0.128  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHHHH-hCC--ccccccccceEe-eCCcccccchHHHHHHH-HHhhhcC-CCeEE---E-EEecCCEE--
Q 019996          110 ESTARQLVRDILELR-EGN--RALGTFAVSVKY-KDPTRSFTGREKYKRRL-WATTALD-NPSVE---M-VMLSTSVL--  177 (332)
Q Consensus       110 E~tirqL~~Di~~lr-egn--rt~sIYApDV~F-KDPFNsFrGrerYkri~-~M~~~L~-nPrfe---m-~m~s~dti--  177 (332)
                      |+.|+++.+...++. .||  ...++|++|+.| .+|-..++|++.+++.+ -+...+. .+.++   + ....++.+  
T Consensus         2 ~~~I~~l~~~~~~A~~~~D~d~~~~lfa~Dav~~~~~g~~~~G~~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~A~~   81 (142)
T 2gxf_A            2 EQQLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEAGDTVLV   81 (142)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHTTSEEEEEEEECSSSCEEEHHHHHHHHHHHTTSCCCSSCCCEEEEEEEEEETTEEEE
T ss_pred             cHHHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEEcCCCCcccCHHHHHHHHHHHHHhhCCCceEEEEEEEEEEcCCEEEE
Confidence            455666666666653 455  589999999999 67877899999999987 4444332 23331   1 22456655  


Q ss_pred             EEEEEEeeeeCccccccCCceEEeeeeEEEE--eCCCC-cEEEEeeeccCCCCcHH
Q 019996          178 SIKWTLRGKPKSIIANIGGDLIVKVYSKFTL--NQISG-QVIEHEELWDLSASSPV  230 (332)
Q Consensus       178 ~irWtLsg~lklPwA~~ggrl~I~G~Se~~L--N~isG-lVvsHiDyWD~S~~dv~  230 (332)
                      ..+|++.+. +     .|.++.+.|..+..|  +. +| --+-|-..|-.+..+++
T Consensus        82 ~~~~~~~~~-~-----~G~~~~~~g~~t~v~~r~~-dG~Wri~~d~~~~~~~~~~~  130 (142)
T 2gxf_A           82 LSQTLLDSD-K-----KDSEYAMERRATYVFKKNA-QGEWLCVIDNSYGTDLIGVM  130 (142)
T ss_dssp             EEEEECCC---------------EEEEEEEEEECT-TSCEEEEEEETTGGGGTC--
T ss_pred             EEEEEEEEC-C-----CCCeEeeeEEEEEEEEECC-CCCEEEEEECCCCcccchhh
Confidence            567777762 2     144455677666555  44 77 45556666666655554

>3ke7_A Putative ketosteroid isomerase; structural genomics, joint C structural genomics, JCSG, protein structure initiative; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503}

Probab=96.69  E-value=0.035  Score=46.20  Aligned_cols=93  Identities=12%  Similarity=0.156  Sum_probs=64.2

Q ss_pred             HhCC--ccccccccceEeeCCccc--ccchHHHHHHH-HHhhhcCCCeEEEE----EecCCEEEEEEEEeeeeCcccccc
Q 019996          124 REGN--RALGTFAVSVKYKDPTRS--FTGREKYKRRL-WATTALDNPSVEMV----MLSTSVLSIKWTLRGKPKSIIANI  194 (332)
Q Consensus       124 regn--rt~sIYApDV~FKDPFNs--FrGrerYkri~-~M~~~L~nPrfem~----m~s~dti~irWtLsg~lklPwA~~  194 (332)
                      .+||  ...++|+||+.|-||+-.  ++|++.|+..+ ++... ...++++.    ..+++.+.+.|+++....      
T Consensus        28 ~~gD~~~~~~lyapDvt~fDp~~~~~~~G~~a~r~yf~~~~~~-~~~~~ei~~p~V~v~gD~A~~~y~l~~~~~------  100 (134)
T 3ke7_A           28 ASTDPMAFVELSDTDVIYFDPSLETKIEGLEQLRTYYKGMQLP-PADHFDMIRPVVQVAQNIAVLTFNLDSYLS------  100 (134)
T ss_dssp             HCSCTTHHHHHEEEEEEEECTTCSSCEESHHHHHHHHHHHCCC-CCSEEEEEEEEEEEETTEEEEEEEEEEEET------
T ss_pred             hCCCHHHHHHhcCCCEEEEcCCCccccCCHHHHHHHHHhcccC-CcceEEEeCCeEEEeCceEEEEEEEEEeeC------
Confidence            6777  478899999999999855  99999999988 43222 22355443    258999999999987643      


Q ss_pred             CCceEEeeeeEEEEeCCCCcEEEEeeeccC
Q 019996          195 GGDLIVKVYSKFTLNQISGQVIEHEELWDL  224 (332)
Q Consensus       195 ggrl~I~G~Se~~LN~isGlVvsHiDyWD~  224 (332)
                      ++...++.+=-++.++ +|+..-=-++|..
T Consensus       101 ~~~~~~r~T~V~~r~~-dG~W~ivH~H~S~  129 (134)
T 3ke7_A          101 DKVIKWNCTEVYRRNP-DNQWKIIQTHWSY  129 (134)
T ss_dssp             TEEEEEEEEEEEEECT-TSBEEEEEEEEEE
T ss_pred             CCcEEEEEEEEEEEcC-CCcEEEEEEeecc
Confidence            3334566666677774 5654443455544

>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}

Probab=96.56  E-value=0.05  Score=44.69  Aligned_cols=112  Identities=13%  Similarity=0.046  Sum_probs=74.1

Q ss_pred             hhHHHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCcccccchHHHHHHH-HHhhhc-CCCeEEEE--EecCCEEEE
Q 019996          107 PLVESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTAL-DNPSVEMV--MLSTSVLSI  179 (332)
Q Consensus       107 p~VE~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L-~nPrfem~--m~s~dti~i  179 (332)
                      ..-|+-||+|.+...++ ..||  ...++|++|+.|-.|=....|+++|++.+ -....+ .+..++++  ...++.+++
T Consensus        13 ~~de~aI~~l~~~~~~A~~~gD~~~l~al~a~D~v~~~~g~~~~Gr~ai~a~~~~~~~~~~~~~~~~~~~i~v~GD~A~~   92 (139)
T 3rob_A           13 HADELAIRTVQYRWLEATRKFDRQVLSSLMTDDVVFLTPGRLPFGKEEFLAACEQNDQRVIIEASATFEEIVIVEPMAYT   92 (139)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTSCCBCHHHHHHHHHHHHHHEEEEEEEEEEEEEEETTEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCHHHHHHHccCcEEEECCCCCccCHHHHHHHHHHHHHhcCCCCceEEEEEEEcCCeEEE
Confidence            46688899999998876 6677  59999999999977654545999999986 222332 23444333  357888888


Q ss_pred             EEEEeeeeCccccccCCceEEeeeeEEEEeC-CCCcEEEEee
Q 019996          180 KWTLRGKPKSIIANIGGDLIVKVYSKFTLNQ-ISGQVIEHEE  220 (332)
Q Consensus       180 rWtLsg~lklPwA~~ggrl~I~G~Se~~LN~-isGlVvsHiD  220 (332)
                      ++..++...+|  ..+..+.+.|.....+=. ++|+=.-.+|
T Consensus        93 ~~~~~~~~t~~--~~g~~~~~~g~~~~v~rK~~dG~W~i~~d  132 (139)
T 3rob_A           93 RTHLHIKVTPR--SGGAVRELAGHAMSIFRRSMFGEWQLARD  132 (139)
T ss_dssp             EEEEEEEEEET--TSCCCEEEEEEEEEEEEECTTSCEEEEEE
T ss_pred             EEEEEEEEecC--CCCceeEeeccEEEEEEECCCCcEEEEEE
Confidence            88777765533  113445677666556632 4785433333

>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28

Probab=95.77  E-value=0.11  Score=42.59  Aligned_cols=114  Identities=10%  Similarity=0.082  Sum_probs=71.7

Q ss_pred             chhHHHHHHHHHHHHHHHH-hCC--ccccccccceEeeCC-cccccchHHHHHHH-HHhhh-cCCCeE-----EEEEecC
Q 019996          106 SPLVESTARQLVRDILELR-EGN--RALGTFAVSVKYKDP-TRSFTGREKYKRRL-WATTA-LDNPSV-----EMVMLST  174 (332)
Q Consensus       106 Sp~VE~tirqL~~Di~~lr-egn--rt~sIYApDV~FKDP-FNsFrGrerYkri~-~M~~~-L~nPrf-----em~m~s~  174 (332)
                      .+..++-|+++...+.++. .||  ...++|++|+.|.++ -..++|++.+++.+ -++.. +....+     .++..++
T Consensus        11 ~~~d~~aI~~~~~~~~~A~~~~D~d~~~~lfa~Da~~~~~~g~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~~~   90 (172)
T 3cu3_A           11 TTADESAIRAFHRQMIDAWNRGSGEGFAAPFSETADFITFEGTHLKGRKEIAAFHQQAFDTVVKGTRLEGEVDFVRFVNS   90 (172)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCEEEHHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEEET
T ss_pred             chhHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCeEEEeCCCCeEECHHHHHHHHHHHhhccCCCcEEEEEEeEEEEeCC
Confidence            3456677888888887774 344  588999999999984 46799999999987 44343 444444     2334567


Q ss_pred             CEEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCC--cEEEEeeec
Q 019996          175 SVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISG--QVIEHEELW  222 (332)
Q Consensus       175 dti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isG--lVvsHiDyW  222 (332)
                      +.+.+.++..+..+-.  + .+.....|.-+++|=-.+|  ||++|..++
T Consensus        91 d~A~v~~~~~~~~~g~--~-~~~~~~~~~~t~v~~r~dG~WrI~~~~~s~  137 (172)
T 3cu3_A           91 QLALMLVVIRVILPGQ--T-ETSASRDSLPLYVVTKGDEGWQIEGLLNTR  137 (172)
T ss_dssp             TEEEEEEEEEEECTTC--S-SBCGGGCBCCEEEEEEETTEEEEEEEECCB
T ss_pred             CEEEEEEEEEEEeCCC--C-CcCCccceEEEEEEEEeCCeEEEEEEEcCc
Confidence            8888887754443300  0 0000122434444433367  999998874

>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*

Probab=95.67  E-value=0.31  Score=38.28  Aligned_cols=80  Identities=8%  Similarity=0.020  Sum_probs=54.5

Q ss_pred             hHHHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCc---ccccchHHHHHHH-HHhhhcC-CCeEE-----EEEecC
Q 019996          108 LVESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPT---RSFTGREKYKRRL-WATTALD-NPSVE-----MVMLST  174 (332)
Q Consensus       108 ~VE~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPF---NsFrGrerYkri~-~M~~~L~-nPrfe-----m~m~s~  174 (332)
                      ..++-|+++.+.+.+. ..||  ...++|++|+.|-+|.   +.++|++.++..+ .++.... ..+++     ++..++
T Consensus        10 ~~~~~I~~l~~~~~~A~~~~D~~~~~~l~a~d~~~~~~~~~g~~~~G~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~gd   89 (143)
T 2ux0_A           10 VRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIGE   89 (143)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCEEEHHHHHHHHHHHTTTTCCSCEEEEEEEEEEEECST
T ss_pred             HHHHHHHHHHHHHHHHHHcCCHHHHHHhcCCCcEEEeccCCCcEEEcHHHHHHHHHhhhhcCCCceeEEEeCCEEEEecC
Confidence            4667777777776655 6677  5889999999998875   6899999999987 4443332 23443     233444


Q ss_pred             CE-EEEEEEEeeee
Q 019996          175 SV-LSIKWTLRGKP  187 (332)
Q Consensus       175 dt-i~irWtLsg~l  187 (332)
                      +. +...|++.+..
T Consensus        90 ~aav~~~~~~~~~~  103 (143)
T 2ux0_A           90 DAACIAYIRLTQYI  103 (143)
T ss_dssp             TEEEEEEEEEEEEE
T ss_pred             cEEEEEEeEeeeee
Confidence            43 45688888743

>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}

Probab=94.64  E-value=0.9  Score=37.09  Aligned_cols=78  Identities=8%  Similarity=-0.005  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHHHh-C--CccccccccceEee-CCcccccchHHHHHHH-HHhh-hcCCCeE-----EEEEecCCEEE
Q 019996          110 ESTARQLVRDILELRE-G--NRALGTFAVSVKYK-DPTRSFTGREKYKRRL-WATT-ALDNPSV-----EMVMLSTSVLS  178 (332)
Q Consensus       110 E~tirqL~~Di~~lre-g--nrt~sIYApDV~FK-DPFNsFrGrerYkri~-~M~~-~L~nPrf-----em~m~s~dti~  178 (332)
                      |+-|++|...+.++.. +  +...++|++|+.|- .|=..++|++.+++.+ -.+. .+....+     +++..+++.+.
T Consensus         5 ~~aI~~l~~~~~~A~~~~D~d~~~~lf~~Da~~~~~~G~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~A~   84 (146)
T 3gzr_A            5 TDAIQALIQAYFTAWNTNAPERFAEIFWPDGSWVNVVGMHWRGRDQIVFAHTAFLKTIFKDCKQELVTIEARTIAPGSAL   84 (146)
T ss_dssp             HHHHHHHHHHHHHHHHTTCGGGSGGGEEEEEEEECTTCCEEESHHHHHHHHHHHHHTTTTTCCEEEEEEEEEEEETTEEE
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHhhccCCeEEEcCCCCeeeCHHHHHHHHHHHhhcccCCCEEEEeEEEEEEcCCCEEE
Confidence            4557777777777743 3  36899999999998 5556789999999987 4433 4444444     44556777766


Q ss_pred             EE--EEEeeee
Q 019996          179 IK--WTLRGKP  187 (332)
Q Consensus       179 ir--WtLsg~l  187 (332)
                      +.  |++.+..
T Consensus        85 v~~~~~l~g~~   95 (146)
T 3gzr_A           85 AVVTLIQDAYV   95 (146)
T ss_dssp             EEEEEEECCEE
T ss_pred             EEEEEEeccee
Confidence            55  7776543

>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}

Probab=94.58  E-value=0.34  Score=39.74  Aligned_cols=95  Identities=7%  Similarity=-0.017  Sum_probs=58.5

Q ss_pred             HHHhCC--ccccccccc--eEeeCCcc-cccchHHHHHHH-HHhhhcCCCeEEE---EE-ecCCEEEEEEEEeeeeCccc
Q 019996          122 ELREGN--RALGTFAVS--VKYKDPTR-SFTGREKYKRRL-WATTALDNPSVEM---VM-LSTSVLSIKWTLRGKPKSII  191 (332)
Q Consensus       122 ~lregn--rt~sIYApD--V~FKDPFN-sFrGrerYkri~-~M~~~L~nPrfem---~m-~s~dti~irWtLsg~lklPw  191 (332)
                      ++..||  ...++|++|  +.|-+|-. .++|++.+++.+ .++.+-....++.   +. .+++.+...++-+...+.  
T Consensus        20 A~~~gD~da~~al~a~d~~v~~v~p~g~~l~G~~ai~~~w~~~f~~~~~~~i~~~~v~v~~~gd~A~v~~~e~~~~~~--   97 (144)
T 3gwr_A           20 AFEARSLDDMMAVWARDDHVACIHPLAAPLNGRAAVAAGWRSMFGAAGRFRLQVKAVHEIRQADHVIRIVDEFLTIGD--   97 (144)
T ss_dssp             HHHHTCHHHHHHHBCSSSCCEEECTTCCCEESHHHHHHHHHHHHHHHCCEEEEEEEEEEEECSSEEEEEEEEEEEETT--
T ss_pred             HHHcCCHHHHHhhccCCCCEEEECCCCCCcccHHHHHHHHHHHHcCCCcEEEEEEEEEEEecCCEEEEEEEEEEEecC--
Confidence            346676  588999999  99999974 689999999998 6666554445533   32 456666655554443331  


Q ss_pred             cccCCceEEeeeeEEEEeCCCC--cEEEEeee
Q 019996          192 ANIGGDLIVKVYSKFTLNQISG--QVIEHEEL  221 (332)
Q Consensus       192 A~~ggrl~I~G~Se~~LN~isG--lVvsHiDy  221 (332)
                        .+|.. ..+..|..|=-.+|  ||+.|--+
T Consensus        98 --~~g~~-~~~r~T~V~~r~~g~WrivhhH~S  126 (144)
T 3gwr_A           98 --ETAPR-PAILATNVYRREADGWRMVLHHAS  126 (144)
T ss_dssp             --CSSCC-CCEEEEEEEEECSSSEEEEEEEEE
T ss_pred             --CCCce-eeEEEEEEEEEECCEEEEEEEecC
Confidence              13333 44555555554344  66666544

>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12

Probab=93.64  E-value=1.1  Score=35.99  Aligned_cols=103  Identities=11%  Similarity=0.072  Sum_probs=66.1

Q ss_pred             cchhHHHHH--HHHHHHHHHHHhCC----ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEEE-----e
Q 019996          105 SSPLVESTA--RQLVRDILELREGN----RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMVM-----L  172 (332)
Q Consensus       105 SSp~VE~ti--rqL~~Di~~lregn----rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~m-----~  172 (332)
                      ++|+...++  +++..+..+...++    .+.+.|+||+.+-+|--.++|++.++..+ -....+.+.++++..     .
T Consensus         2 ~~~~~~ev~~~~~~ie~W~~~~~~~~dl~~l~a~~a~d~~mv~p~G~~~g~~~~~~~~~~~~g~~pgl~i~i~~l~~~~~   81 (128)
T 1tp6_A            2 TCAYRREIHHAHVAIRDWLAGDSRADALDALMARFAEDFSMVTPHGVVLDKTALGELFRSKGGTRPGLRIEIDGESLLAS   81 (128)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHTCCCTTHHHHHHTTEEEEEEEECTTSCEEEHHHHHHHHHHHTTCSTTCEEEEEEEEEEEE
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCcHhHHHHHHHhcCCCEEEECCCCeECCHHHHHHHHHHhhCCCCCeEEEEEEEEEEee
Confidence            345444443  34444444433343    58899999999999999999999999998 666666677774422     3


Q ss_pred             cCCEEEEEEEEeeeeCccccccCCceEEeeeeEEEE-eCCCCcE
Q 019996          173 STSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTL-NQISGQV  215 (332)
Q Consensus       173 s~dti~irWtLsg~lklPwA~~ggrl~I~G~Se~~L-N~isGlV  215 (332)
                      +++.+.++|+=.....      +++ .. =.|++.| ...+|++
T Consensus        82 ~~d~~vv~y~~~~~~~------~~~-~~-rrsT~v~~~~~~g~~  117 (128)
T 1tp6_A           82 GVDGATLAYREIQSDA------AGR-SE-RLSTVVLHRDDEGRL  117 (128)
T ss_dssp             ETTEEEEEEEEEEEET------TEE-EE-EEEEEEEEECTTCCE
T ss_pred             cCCEEEEEEEEEeccC------Cce-eE-EEEEEEEEeCCCCCE
Confidence            6899999986333321      221 21 2468888 5547753

>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28

Probab=93.16  E-value=2  Score=33.83  Aligned_cols=76  Identities=12%  Similarity=0.044  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHHHH-hCC--ccccccccceEeeCCcccc-cchHHHHHHH-HH-hh---------hcCCCeEEEEEec
Q 019996          109 VESTARQLVRDILELR-EGN--RALGTFAVSVKYKDPTRSF-TGREKYKRRL-WA-TT---------ALDNPSVEMVMLS  173 (332)
Q Consensus       109 VE~tirqL~~Di~~lr-egn--rt~sIYApDV~FKDPFNsF-rGrerYkri~-~M-~~---------~L~nPrfem~m~s  173 (332)
                      -++-|++|...+..+. ++|  ...++|++|+.|..|...+ +|++.+++.+ -+ ..         .+.++.++   .+
T Consensus        17 d~~~I~~l~~~y~~a~D~~d~~~~~~lf~~Da~~~~~~g~~~~G~~~i~~~~~~~~~~~~~~~~~~h~~~~~~i~---~~   93 (155)
T 2rfr_A           17 DREEIRELIARYGPLADSGDAEALSELWVEDGEYAVVGFATAKGRAAIAALIDGQTHRALMADGCAHFLGPATVT---VE   93 (155)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTSCCEESHHHHHHHHHSHHHHHHHHHCEEEEECCCEEE---EE
T ss_pred             HHHHHHHHHHHHHHHhcCCCHHHHHhhcCCceEEEcCCCccccCHHHHHHHHHhccccccCCCceeEeCCCeEEE---Ee
Confidence            3455666666666653 344  5889999999999998888 9999999887 22 11         23344443   34


Q ss_pred             CCEEEEEEEEeeee
Q 019996          174 TSVLSIKWTLRGKP  187 (332)
Q Consensus       174 ~dti~irWtLsg~l  187 (332)
                      ++++..+|.+....
T Consensus        94 gd~A~~~~~~~~~~  107 (155)
T 2rfr_A           94 GDTATARCHSVVFR  107 (155)
T ss_dssp             TTEEEEEEEEEEEE
T ss_pred             CCEEEEEEEEEEEE
Confidence            68999999887643

>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16

Probab=92.66  E-value=2.1  Score=33.12  Aligned_cols=77  Identities=14%  Similarity=0.173  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHHHHH-HhCC--cccccc--ccceEeeCCcccccchHHHHHHH-HHhhh-c--CCCeE---EEEEecCCEE
Q 019996          110 ESTARQLVRDILEL-REGN--RALGTF--AVSVKYKDPTRSFTGREKYKRRL-WATTA-L--DNPSV---EMVMLSTSVL  177 (332)
Q Consensus       110 E~tirqL~~Di~~l-regn--rt~sIY--ApDV~FKDPFNsFrGrerYkri~-~M~~~-L--~nPrf---em~m~s~dti  177 (332)
                      |+-|+++.+...+. ..||  ...++|  ++|+.|-+|---.+|++.++... -++.. +  ...++   +++..+++..
T Consensus         4 ~~~I~~~~~~~~~A~~~~D~~~~~~~y~~~~d~~~~~~~~~~~G~~~i~~~~~~~f~~~~~~~~l~~~~~~~~~~~~~~a   83 (122)
T 3b7c_A            4 TDDIVQLLKGQEEAWNRGDLDAYMQGYWQNEQLMLISNGKFRNGWDETLAAYKKNYPDKESLGELKFTIKEIKMLSNYAA   83 (122)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHTTBCCSTTCEEECSSCEEECHHHHHHHHHHHCSSGGGSCEEEEEEEEEEEEETTEE
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCCEEEECCCccccCHHHHHHHHHHhcCChhhcCeeEEEEEEEEEcCCCEE
Confidence            55566666666555 5666  478999  89999999987899997766654 22221 1  11233   3344566776


Q ss_pred             EE--EEEEeee
Q 019996          178 SI--KWTLRGK  186 (332)
Q Consensus       178 ~i--rWtLsg~  186 (332)
                      .+  +|++.+.
T Consensus        84 ~v~~~~~~~~~   94 (122)
T 3b7c_A           84 MVVGRWDLKRL   94 (122)
T ss_dssp             EEEEEEEEECS
T ss_pred             EEEEEEEEEcc
Confidence            55  5666554

>3ecf_A NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Anabaena variabilis atcc 29413} SCOP: d.17.4.21

Probab=92.33  E-value=2  Score=36.67  Aligned_cols=99  Identities=20%  Similarity=0.292  Sum_probs=81.3

Q ss_pred             HHHHHHHHHHHHHHHHhCCccccccccceEeeCC--cccccchHHHHHHH-HHhhhcCCCeEEEEEecCCEEEEEEEEee
Q 019996          109 VESTARQLVRDILELREGNRALGTFAVSVKYKDP--TRSFTGREKYKRRL-WATTALDNPSVEMVMLSTSVLSIKWTLRG  185 (332)
Q Consensus       109 VE~tirqL~~Di~~lregnrt~sIYApDV~FKDP--FNsFrGrerYkri~-~M~~~L~nPrfem~m~s~dti~irWtLsg  185 (332)
                      -|+.++-+.+=++...+||.+.=-|++|+.|--|  -++.+|++....-+ ++.+.+....+.-+......+..-|.|+.
T Consensus         4 re~~v~iieqYl~aF~TgdfS~VqFs~~~~F~sPir~~~l~G~~tV~gFlt~V~trVa~V~i~~hiVeyp~as~vf~m~T   83 (130)
T 3ecf_A            4 TEKYHEILKKYFLSFETGDFSQVQFSCNLEFLSPISGNTLKGTEEVIPFLKGVTTRVAEVNIMSTTVEYPRASGVWQMRT   83 (130)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTSCEEEEEEECCTTCSSCEESHHHHHHHHHHHHTTEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCeeecccccCcEEecCccCCCccCchhHHHHHhhhhhhhheeeeeEEEeccCccceeEEEEe
Confidence            4777777888888889999999999999999999  57899999999888 88888877777777788889999999998


Q ss_pred             eeCccccccCCceEEeeeeEEEEeCCCCcEEE
Q 019996          186 KPKSIIANIGGDLIVKVYSKFTLNQISGQVIE  217 (332)
Q Consensus       186 ~lklPwA~~ggrl~I~G~Se~~LN~isGlVvs  217 (332)
                      +        +|.+-+ ----++||+ +|.++-
T Consensus        84 t--------kG~~~~-~~~~f~~de-egi~~i  105 (130)
T 3ecf_A           84 T--------KGTLYT-LHNFFRLDE-EGIVYV  105 (130)
T ss_dssp             T--------TSCEEE-EEEEEEEET-TEEEEE
T ss_pred             c--------cceEEE-Eeehheecc-cCcEEE
Confidence            6        665431 123578999 998763

>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28

Probab=91.86  E-value=2.3  Score=34.10  Aligned_cols=111  Identities=8%  Similarity=0.028  Sum_probs=65.7

Q ss_pred             chhHHHHHHHHHHHHHHHHh--CC--ccccccccceEeeCC-cc--cccchHHHHHHH-HHhhhcCCCe-E----EEEEe
Q 019996          106 SPLVESTARQLVRDILELRE--GN--RALGTFAVSVKYKDP-TR--SFTGREKYKRRL-WATTALDNPS-V----EMVML  172 (332)
Q Consensus       106 Sp~VE~tirqL~~Di~~lre--gn--rt~sIYApDV~FKDP-FN--sFrGrerYkri~-~M~~~L~nPr-f----em~m~  172 (332)
                      ...-++-|++|...+.++..  +|  ...++|++|+.|.-| ..  .++|++.++..+ .....+...+ +    .+...
T Consensus        23 ~l~d~~~I~~l~~~y~~alD~~~D~d~~~~lfteDa~~~~~~~g~~~~~G~~~i~~~~~~~~~~~~~~~h~~~~~~I~~~  102 (163)
T 3b8l_A           23 PIEDRLAIQDLMIAYAHAVDTVSDIDAVLDVFTEDAVFDLSGIGLTPQVGHAGIREFFTNVFANMSHHAHYLTNFAVTGY  102 (163)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCHHHHHTTEEEEEEEECGGGTCCCEEHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHCcCCCHHHHHhhcCCCEEEEecCCCCCCccCHHHHHHHHHHhhccCCceEEEecCEEEEEe
Confidence            34456677888777777754  34  588999999999865 34  799999998887 3222221100 1    22225


Q ss_pred             cCCEEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCC--cEEEEe
Q 019996          173 STSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISG--QVIEHE  219 (332)
Q Consensus       173 s~dti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isG--lVvsHi  219 (332)
                      +++++..+|.+..... +  +.++.....|.-+.+|=-.+|  ||.+..
T Consensus       103 ~gd~A~~~~~~~~~~~-~--~~g~~~~~~g~y~d~~~r~dg~WrI~~r~  148 (163)
T 3b8l_A          103 EGDTASMRAYVIGMGV-G--KDGRAVTVNGRYFFEVRRTEKGWKATRYT  148 (163)
T ss_dssp             CSSEEEEEEEEEEEEE-E--TTSCEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred             CCCEEEEEEEEEEEEE-c--CCCCeEEEEEEEEEEEEEeCCEEEEEEEE
Confidence            6889999988876322 1  112233345555555543344  555543

>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25

Probab=91.54  E-value=4.6  Score=32.54  Aligned_cols=110  Identities=9%  Similarity=-0.063  Sum_probs=67.3

Q ss_pred             HHHHHHHHHHHHHHHh-CC--ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEE----EEecCCEEEEEE
Q 019996          110 ESTARQLVRDILELRE-GN--RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEM----VMLSTSVLSIKW  181 (332)
Q Consensus       110 E~tirqL~~Di~~lre-gn--rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem----~m~s~dti~irW  181 (332)
                      ++-|++|.....++.. +|  ...++|++|+.|..|-..++|++.++..+ ..... ...+-.+    ...+++++..+|
T Consensus        13 ~~~I~~l~~~y~~a~D~~D~~~~~~lf~~Da~~~~~g~~~~G~~~i~~~~~~~~~~-~~~~h~~~~~~i~~~gd~A~~~~   91 (170)
T 2chc_A           13 ILRIQALCARYCLTINTQDGEGWAGCFTEDGAFEFDGWVIRGRPALREYADAHARV-VRGRHLTTDLLYEVDGDVATGRS   91 (170)
T ss_dssp             HHHHHHHHHHHHHHHTTTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHH-CCCCEEEEEEEEEEETTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHhcccCcEEEEeCCCCcCCHHHHHHHHHHhhcc-cceEEecCCeEEEEeCCEEEEEE
Confidence            4566777777766644 33  48899999999999988889999999887 33333 1111111    124678999999


Q ss_pred             EEeeeeCccccccCCc-eEEeeeeEEEEeCCCC--cEEEEeeeccC
Q 019996          182 TLRGKPKSIIANIGGD-LIVKVYSKFTLNQISG--QVIEHEELWDL  224 (332)
Q Consensus       182 tLsg~lklPwA~~ggr-l~I~G~Se~~LN~isG--lVvsHiDyWD~  224 (332)
                      .+......   . .|. +...|.-+.+|=-.+|  ||.++.=.-|-
T Consensus        92 ~~~~~~~~---~-~g~~~~~~g~y~d~~~r~dg~Wri~~r~~~~~~  133 (170)
T 2chc_A           92 ASVVTLAT---A-AGYKILGSGEYQDRLIKQDGQWRIAYRRLRNDR  133 (170)
T ss_dssp             EEEEEEEE---T-TEEEEEEEEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred             EEEEEEEc---C-CCCEEEEEEEEEEEEEEECCEEEEEEEEEEEec
Confidence            98543211   1 232 3345555555543355  67766555443

>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}

Probab=90.56  E-value=5.7  Score=31.82  Aligned_cols=73  Identities=16%  Similarity=0.141  Sum_probs=53.1

Q ss_pred             hHHHHHHHHHHHHHHHHhC-C--ccccccccceEeeCCcccccchHHHHHHH-HHhhhc-CCCeE-----EEEEecCCEE
Q 019996          108 LVESTARQLVRDILELREG-N--RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTAL-DNPSV-----EMVMLSTSVL  177 (332)
Q Consensus       108 ~VE~tirqL~~Di~~lreg-n--rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L-~nPrf-----em~m~s~dti  177 (332)
                      ..++-|++|...+.++... |  ...++|++|+.|..|-..++|++.+++.+ -++... ....+     +++..+++.+
T Consensus        16 ~d~~~i~~l~~~y~~A~~~~D~d~~~~lf~~Da~~~~~g~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~A   95 (143)
T 4i4k_A           16 AALAAVAALPARIVAAWADHDADRFADVFAEDGTMILPGLFRKGRENIRTHMAAAFAGPYKGTRVIGSPIDARLLGDGIA   95 (143)
T ss_dssp             HHHHHHHTHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEEETTEE
T ss_pred             ccHHHHHHHHHHHHHHHHcCCHHHHHHHhhcCceEEeCCCeecCHHHHHHHHHHHHhhcCCCCeEEeeeEEEEEcCCCEE
Confidence            4567788888888877543 3  58999999999987777799999999987 444433 45444     3344677887


Q ss_pred             EEE
Q 019996          178 SIK  180 (332)
Q Consensus       178 ~ir  180 (332)
                      .+.
T Consensus        96 ~v~   98 (143)
T 4i4k_A           96 LLI   98 (143)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            765

>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7

Probab=88.37  E-value=6.2  Score=32.48  Aligned_cols=112  Identities=9%  Similarity=0.044  Sum_probs=68.4

Q ss_pred             hHHHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCc---ccccchHHHHHHHHHhhh--cCCCeEEE-----EEecC
Q 019996          108 LVESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPT---RSFTGREKYKRRLWATTA--LDNPSVEM-----VMLST  174 (332)
Q Consensus       108 ~VE~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPF---NsFrGrerYkri~~M~~~--L~nPrfem-----~m~s~  174 (332)
                      ++|+-|+++.+.+.++ ..||  ....+|+||+.|=||+   +-++|.+.|+.++   .+  ....++++     +...+
T Consensus         9 ~~~~eI~~~~~~~~~Ai~~gD~~~~~~l~~~dv~~Fd~~~~g~~~~g~~~~r~~f---~~~~~~~~~~~~~~~~V~~~g~   85 (143)
T 2f86_B            9 AQKQDIVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRFYF---DGNRKNQVHTTMLNPNVHIIGE   85 (143)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCCEETTHHHHTTS---SSCSCCSCEEEEEEEEEEEETT
T ss_pred             hHHHHHHHHHHHHHHHHHccCHHHHHHhcCCCEEEEccCcCCccccCHHHHHHHH---hcccCCcceeEEEcceEEEeCC
Confidence            5788899998888877 6777  4888999999999984   2489999999543   22  22233322     23343


Q ss_pred             CEEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCC-cEEEEeeeccCCC
Q 019996          175 SVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISG-QVIEHEELWDLSA  226 (332)
Q Consensus       175 dti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isG-lVvsHiDyWD~S~  226 (332)
                      +.+.+.++.......   ..|..+...+..+..+-..+| -.+-| ++|-..+
T Consensus        86 d~Av~~y~~~~~~~~---~~G~~~~~~~r~T~V~~k~~g~WkivH-~H~S~~~  134 (143)
T 2f86_B           86 DAACVAYVKLTQFLD---RNGEAHTRQSQESRVWSKKQGRWVCVH-VHRSTQP  134 (143)
T ss_dssp             TEEEEEEEEEEEEEC---TTSCEEEEEEEEEEEEEEETTEEEEEE-EEEEC--
T ss_pred             CEEEEEEEeeeeecc---CCCCeeeEEEEEEEEEEEeCCcEEEEE-EeECCCC
Confidence            888888666554321   113345555555555554445 33334 4555444

>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15

Probab=88.31  E-value=6  Score=29.36  Aligned_cols=79  Identities=8%  Similarity=0.058  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCcccccchHHHHHHHHHhhhcCCCeE-----EEEEecCCEEEEE
Q 019996          109 VESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSV-----EMVMLSTSVLSIK  180 (332)
Q Consensus       109 VE~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFNsFrGrerYkri~~M~~~L~nPrf-----em~m~s~dti~ir  180 (332)
                      +++.|++|.+.+.+. ..||  .+..++++|+.|-+|--...|++.|.+.+-- ..+..+.+     +++..+++.+.+.
T Consensus         4 ~~~~i~~l~~~~~~A~~~~D~~~l~~l~~~d~~~~~~~G~~~~~~~~i~~~~~-~~~~~~~~~~~~~~v~~~g~~a~~~~   82 (123)
T 2r4i_A            4 QRDVILDCEKKLLTAIQNNDVESLEVLLHDDLLFIIPSGETVTKETDIAAYSS-GKIALRAVVPSDYIIRIIHDTVVVSV   82 (123)
T ss_dssp             HHHHHTHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHT-TCEEEEEEEEEEEEEEEETTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHhhhCcCeEEECCCCCCccHHHHHHHHhc-CCeEEEEEeecccEEEEECCEEEEEE
Confidence            456777777776654 5566  5888999999999998888898888777611 11111223     3334455555555


Q ss_pred             -EEEeeeeC
Q 019996          181 -WTLRGKPK  188 (332)
Q Consensus       181 -WtLsg~lk  188 (332)
                       +++.+...
T Consensus        83 ~~~~~~~~~   91 (123)
T 2r4i_A           83 NIEIKGEYM   91 (123)
T ss_dssp             EEEEEEEET
T ss_pred             EEEEEEEEC
Confidence             77765533

>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0

Probab=87.68  E-value=3.8  Score=32.10  Aligned_cols=81  Identities=6%  Similarity=-0.063  Sum_probs=49.6

Q ss_pred             cchhHHHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCcccccchHHHHHHHHHhhhcCCCeE-----EEEEecCCE
Q 019996          105 SSPLVESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSV-----EMVMLSTSV  176 (332)
Q Consensus       105 SSp~VE~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFNsFrGrerYkri~~M~~~L~nPrf-----em~m~s~dt  176 (332)
                      ..|.+|+-|++|.+.+.+. ..||  .+..++++|+.|-+|--...+++.|.+.+- ...+.-+++     +++...++.
T Consensus         8 ~~~~~~~~I~~l~~~~~~A~~~~D~~~l~~L~~~d~~~v~~~G~~~~~~~~l~~~~-~g~~~~~~~~~~~~~v~~~g~d~   86 (134)
T 3fsd_A            8 TLASPADDIAFYEERLRAAMLTGDLKGLETLLADDLAFVDHTGCVKTKQTHLEPYR-AGLLKLSRLDLSDAVVRAAGEDG   86 (134)
T ss_dssp             ------CCHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHH-TTCEEEEEEEEEEEEEEESSTTE
T ss_pred             CCCChHHHHHHHHHHHHHHHHhCCHHHHHhhcCCCEEEECCCCcCccHHHHHHHHH-cCCceEEEEEEeccEEEEeCCCE
Confidence            5678888888888887765 6777  488999999999999877777777766651 111211233     333444547


Q ss_pred             EEEEEEEeee
Q 019996          177 LSIKWTLRGK  186 (332)
Q Consensus       177 i~irWtLsg~  186 (332)
                      +.+..+++..
T Consensus        87 Avv~~~~~~~   96 (134)
T 3fsd_A           87 RVVVVRAVTA   96 (134)
T ss_dssp             EEEEEEEEEE
T ss_pred             EEEEEEEEEE
Confidence            6666655543

>3a76_A Gamma-hexachlorocyclohexane dehydrochlorinase; barrel fold, lyase, detoxification; HET: SPD; 2.25A {Sphingomonas paucimobilis}

Probab=86.97  E-value=5.9  Score=32.74  Aligned_cols=123  Identities=7%  Similarity=-0.037  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHH-hCC--ccccccccceEee-CCcccccchHHHHHHH-HH-hhhcCCCeE--EE----EEecC-CE
Q 019996          110 ESTARQLVRDILELR-EGN--RALGTFAVSVKYK-DPTRSFTGREKYKRRL-WA-TTALDNPSV--EM----VMLST-SV  176 (332)
Q Consensus       110 E~tirqL~~Di~~lr-egn--rt~sIYApDV~FK-DPFNsFrGrerYkri~-~M-~~~L~nPrf--em----~m~s~-dt  176 (332)
                      ++-|++|...+.++. ++|  .+.++|++|+.|. .+...++|++.++..+ -. ...+  +..  .+    ....+ ++
T Consensus        30 ~~~I~~ll~ry~~alD~~d~d~~~~lfteDa~~~~~~~g~~~G~~~i~~~~~~~~~~~~--~~t~H~i~n~~I~~~g~d~  107 (176)
T 3a76_A           30 RAAIQDLYSDKLIAVDKRQEGRLASIWWDDAEWTIEGIGTYKGPEGALDLANNVLWPMF--HECIHYGTNLRLEFVSADK  107 (176)
T ss_dssp             HHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEETTTEEEEHHHHHHHHHHHTHHHHE--EEEEEEEEEEEEEESSSSE
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHHHhhccCCeEEEcCCCccccCHHHHHHHHHHhhhccc--CceEEecCCeEEEEcCCCe
Confidence            455666666666653 344  4889999999986 3445689999888776 21 1111  121  11    11345 89


Q ss_pred             EEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCC--cEEEE------eeeccCCCCcHHHHHHHh
Q 019996          177 LSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISG--QVIEH------EELWDLSASSPVARAFFW  236 (332)
Q Consensus       177 i~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isG--lVvsH------iDyWD~S~~dv~aQaf~~  236 (332)
                      +..+|...+....+  ..+..+...|.-+.+|=-.+|  ||.+-      .+-++.+...+....|.+
T Consensus       108 A~~~~~~~~~~~~~--~~~~~~~~~gry~d~l~r~dg~WrI~~r~~~~~~~~~~~~~~~~~~~~~~~~  173 (176)
T 3a76_A          108 VNGIGDVLLLGNLV--EGNQSILIAAVFTDEYERRDGVWKFSKRNACTNYFTPLAGIHFAPPGIHFAP  173 (176)
T ss_dssp             EEEEEEEEEEEEET--GGGEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEECTTCCCCCC------
T ss_pred             EEEEEEEEEEEEec--CCCceEEEEEEEEEEEEEECCEEEEEEEEEEEEeccCCCccccCCCccccCC
Confidence            99988554433111  102223334544444432234  44432      233555555555555543

>2rgq_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.80A {Nostoc punctiforme} SCOP: d.17.4.25

Probab=84.74  E-value=13  Score=29.31  Aligned_cols=114  Identities=12%  Similarity=0.042  Sum_probs=65.5

Q ss_pred             chhHHHHHHHHHHHHHHHH-hCC--ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEE----E-EEecCCE
Q 019996          106 SPLVESTARQLVRDILELR-EGN--RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVE----M-VMLSTSV  176 (332)
Q Consensus       106 Sp~VE~tirqL~~Di~~lr-egn--rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfe----m-~m~s~dt  176 (332)
                      |+.-+.-|++|......+. +++  ...++|++|+.|.-|...++|++.++..+ ........+...    + ....+++
T Consensus         5 ~~~d~~~I~~l~~rya~~lD~~d~~~~~~lft~Da~~~~~~g~~~g~~~i~~~~~~~~~~~~~~t~H~i~n~~i~~~~d~   84 (144)
T 2rgq_A            5 TALDKLEIMELAARFEMSLDKEDVENYLATFASDGALQGFWGIAKGKEELRQGFYAMLDTFARGKRHCSSNAIIQGNYDE   84 (144)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSE
T ss_pred             CHHHHHHHHHHHHHHHHHHcCCCHHHHHhhccCcEEEEcCCCCCCCHHHHHHHHHHHHhhCCCCcEEecCCeEEEEeCCE
Confidence            3444455666666665553 233  58899999999987755679999988887 333333344331    1 1244567


Q ss_pred             EEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCC--cEEEEeeeccC
Q 019996          177 LSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISG--QVIEHEELWDL  224 (332)
Q Consensus       177 i~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isG--lVvsHiDyWD~  224 (332)
                      +..++.+......     ...+...|.-+.+|--.+|  ||.+..=..|-
T Consensus        85 a~~~~~~~~~~~~-----~~~~~~~g~y~d~~~r~dg~Wri~~r~~~~d~  129 (144)
T 2rgq_A           85 ATMESYLTVVNRE-----DLNRAGSAFVKDQVRKINGKWYLILRQIEVDP  129 (144)
T ss_dssp             EEEEEEEEEEESS-----SSCEEEEEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred             EEEEEEEEEEEec-----CCeEEEEEEEEEEEEEECCEEEEEEEEEEecC
Confidence            7777776644321     1234455665545543234  55554444443

>3ef8_A Putative scyalone dehydratase; YP_496742.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE PG4; 1.50A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28

Probab=80.04  E-value=17  Score=28.94  Aligned_cols=76  Identities=14%  Similarity=0.131  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHHHHhC---CccccccccceEeeC-CcccccchHHHHHHH-HHhhhcCCCeE-------EEEEecCCEE
Q 019996          110 ESTARQLVRDILELREG---NRALGTFAVSVKYKD-PTRSFTGREKYKRRL-WATTALDNPSV-------EMVMLSTSVL  177 (332)
Q Consensus       110 E~tirqL~~Di~~lreg---nrt~sIYApDV~FKD-PFNsFrGrerYkri~-~M~~~L~nPrf-------em~m~s~dti  177 (332)
                      +.-|++|...+..+...   +...++|++|+.|.- |...++|++.++..+ -....+  +..       .+...+++++
T Consensus        10 ~~~I~~l~~ry~~~~D~~d~~~~~~lFt~D~~~~~~~~~~~~G~~~i~~~~~~~~~~~--~~~~H~~~n~~I~~~gdd~A   87 (150)
T 3ef8_A           10 MRAIERMMFDYSYHLDMNHPEELAALFVEDCEVSYAPNFGATGRDAYKKTLEGIGTFF--RGTSHHNSNICIDFVSETEA   87 (150)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEETTEEEESHHHHHHHTTTHHHHE--EEEEEEEEEEEEEEEETTEE
T ss_pred             HHHHHHHHHHHHHHhcCCCHHHHHhhccCceEEEccCCCCCCCHHHHHHHHHHhhccc--CceEEecCCEEEEEcCCCEE
Confidence            44567777777666433   258899999999986 445689999998876 222211  111       1112344799


Q ss_pred             EEEEEEeeee
Q 019996          178 SIKWTLRGKP  187 (332)
Q Consensus       178 ~irWtLsg~l  187 (332)
                      ..+|.+....
T Consensus        88 ~~~~~~~~~~   97 (150)
T 3ef8_A           88 NVRSVVLAIH   97 (150)
T ss_dssp             EEEEEEEEEE
T ss_pred             EEEEEEEEEE
Confidence            9999987643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	332
d3dxoa1	117	Uncharacterized protein Atu0744 {Agrobacterium tum	99.47
d2gexa1	138	Nogalamycin biosynthesis protein SnoL {Streptomyce	99.25
d1oh0a_	125	Delta-5-3-ketosteroid isomerase, steroid delta-iso	99.24
d1ohpa1	125	Delta-5-3-ketosteroid isomerase, steroid delta-iso	99.22
d2a15a1	132	Hypothetical protein Rv0760c {Mycobacterium tuberc	99.21
d1z1sa1	129	Uncharacterized protein PA3332 {Pseudomonas aerugi	98.92
d2geya1	144	Putative hydroxylase AclR {Streptomyces galilaeus	98.91
d1s5aa_	139	Hypothetical protein YesE {Bacillus subtilis [TaxI	98.9
d1nwwa_	145	Limonene-1,2-epoxide hydrolase {Rhodococcus erythr	98.88
d3ebta1	131	Uncharacterized protein BPSS0132 {Burkholderia pse	98.8
d2f99a1	140	Aklanonic acid methyl ester cyclase, AknH {Strepto	98.77
d3dm8a1	135	Uncharacterized protein Rpa4348 {Rhodopseudomonas	98.74
d2bnga1	132	Uncharacterized protein Mb2760 {Mycobacterium tube	98.73
d1sjwa_	142	Nogalonic acid methyl ester cyclase SnoaL {Strepto	98.48
d3dmca1	133	Uncharacterized protein Ava2261 {Anabaena variabil	98.48
d3en8a1	127	Uncharacterized protein BxeB2092 {Burkholderia xen	98.43
d3ec9a1	130	Uncharacterized protein BTHI0051 {Burkholderia tha	98.36
d1tuha_	131	Hypothetical protein egc068 from a soil-derived mo	98.14
d1m98a2	142	Orange carotenoid protein, C-terminal domain {Cyan	97.71
d2k54a1	123	Uncharacterized protein Atu0742 {Agrobacterium tum	97.65
d3d9ra1	132	Uncharacterized protein ECA1476 {Pectobacterium at	96.91
d2gxfa1	128	Hypothetical protein YybH {Bacillus subtilis [TaxI	95.99
d3bb9a1	121	Uncharacterized protein Sfri1973 {Shewanella frigi	95.44
d2rgqa1	133	Uncharacterized protein NpunR3134 {Nostoc punctifo	94.51
d2rcda1	127	Uncharacterized protein ECA3500 {Pectobacterium at	93.73
d3cu3a1	162	Uncharacterized protein NpunR1993 {Nostoc punctifo	93.7
d3b7ca1	121	Uncharacterized protein SO0125 {Shewanella oneiden	93.19
d3er7a1	118	Uncharacterized protein Exig0174 {Exiguobacterium	91.69
d3b8la1	144	Uncharacterized protein Saro3538 {Novosphingobium	90.58
d3cnxa1	153	Uncharacterized protein SAV4671 {Streptomyces aver	90.45
d3ef8a1	149	Uncharacterized protein Saro1465 {Novosphingobium	89.32
d2chca1	167	Uncharacterized protein Rv3472 {Mycobacterium tube	86.5
d2ux0a1	135	Association domain of calcium/calmodulin-dependent	82.0
d2rfra1	153	Uncharacterized protein Saro3722 {Novosphingobium	80.17

>d3dxoa1 d.17.4.19 (A:1-117) Uncharacterized protein Atu0744 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Atu0744-like
domain: Uncharacterized protein Atu0744
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.47  E-value=2.6e-13  Score=105.43  Aligned_cols=102  Identities=15%  Similarity=0.164  Sum_probs=85.3

Q ss_pred             HHHHHHHHHHHhC-C------ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEE-E--ecCCEEEEEEE
Q 019996          114 RQLVRDILELREG-N------RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMV-M--LSTSVLSIKWT  182 (332)
Q Consensus       114 rqL~~Di~~lreg-n------rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~-m--~s~dti~irWt  182 (332)
                      .++++.+.++... +      ...++|++||.|.||++.++|++.+++++ .++..+.++++++. .  ..++.+..+|+
T Consensus         5 ~~~~~~y~~awn~~d~~~~~~~l~~~~a~d~~~~dP~~~~~G~~ai~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~w~   84 (117)
T d3dxoa1           5 LTIAQTYLAAWNEEDNERRRHLVGQAWAENTRYVDPLMQGEGQQGIAAMIEAARQKFPGYRFVLAGTPDGHGNFTRFSWR   84 (117)
T ss_dssp             HHHHHHHHHHHHCSCHHHHHHHHHHHEEEEEEEECSSCEEEHHHHHHHHHHHHHHHSTTCEEEEEEEEEEETTEEEEEEE
T ss_pred             HHHHHHHHHHHhccCchhhHHHHHHHccCCEEEECCCCCcccHHHHHHHHHHHHHhCCCcEEEEEEEEecCCCEEEEEEE
Confidence            4456666666432 1      26789999999999999999999999999 99999999999543 2  56899999999


Q ss_pred             EeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccC
Q 019996          183 LRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDL  224 (332)
Q Consensus       183 Lsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~  224 (332)
                      |.+.        +|.+.+.|++.++||+ +|||.+.++|||.
T Consensus        85 ~~~~--------~~~~~~~G~d~~~~~~-dGkI~~~~~f~D~  117 (117)
T d3dxoa1          85 LISP--------DGDDVAGGTDVVSLNT-EGRIDNVVGFLDG  117 (117)
T ss_dssp             EECT--------TSCEEEEEEEEEEECT-TSSEEEEEEEEEC
T ss_pred             EecC--------CCCeEEEEEEEEEECC-CCCEEEEEEEccC
Confidence            8763        5668899999999999 9999999999994

>d2gexa1 d.17.4.9 (A:2-139) Nogalamycin biosynthesis protein SnoL {Streptomyces nogalater [TaxId: 38314]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Nogalamycin biosynthesis protein SnoL
species: Streptomyces nogalater [TaxId: 38314]

Probab=99.25  E-value=7.2e-11  Score=92.62  Aligned_cols=110  Identities=14%  Similarity=0.224  Sum_probs=87.8

Q ss_pred             HHHHHHHHHH-hCC--ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEEEeeeeC
Q 019996          115 QLVRDILELR-EGN--RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWTLRGKPK  188 (332)
Q Consensus       115 qL~~Di~~lr-egn--rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWtLsg~lk  188 (332)
                      |++.++.++. +||  ...++|+||+.|.+|.+.-.|++.++.++ .+...+.+.++++.  ..+++.+.+.|+.+++..
T Consensus         7 e~~~~~~~a~~~~D~~~~~~~~a~D~~~~~~~~~~~G~~~~~~~~~~~~~~~~d~~~~~~~~~~~gd~v~~~~~~~~~~~   86 (138)
T d2gexa1           7 ERCLEMVAAWNRWDVSGVVAHWAPDVVHYDDEDKPVSAEEVVRRMNSAVEAFPDLRLDVRSIVGEGDRVMLRITCSATHQ   86 (138)
T ss_dssp             HHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCEECHHHHHHHHHHHHHHCTTCEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred             HHHHHHHHHHHccCHHHHHHHhCccccccCCCCCccCHHHHHHHHHHHHHhccCceeeeeeeeeccccceeeeccccccc
Confidence            3444444443 333  58899999999999999999999999998 77888888888553  467899999999999887


Q ss_pred             ccccc---cCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          189 SIIAN---IGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       189 lPwA~---~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      -+|.+   .|-.+.++|.+.++|++ +|||++|.||||..
T Consensus        87 g~~~~~~~tG~~v~~~~~~~~~~~d-~GkI~e~~~~~D~~  125 (138)
T d2gexa1          87 GVFMGIAPTGRKVRWTYLEELRFSE-AGKVVEHWDVFNFS  125 (138)
T ss_dssp             SCBTTBCCCCCEEEEEEEEEEEECT-TSCEEEEEEEEECH
T ss_pred             ccccccCCcccEEEEEEEEEEEEcc-CCEEEEEEEEECHH
Confidence            54422   12246799999999999 99999999999964

>d1oh0a_ d.17.4.3 (A:) Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Ketosteroid isomerase-like
domain: Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI
species: Pseudomonas putida [TaxId: 303]

Probab=99.24  E-value=3.5e-11  Score=92.25  Aligned_cols=107  Identities=13%  Similarity=0.198  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHH-HhCC--ccccccccceEeeCCcc--cccchHHHHHHH-HHhhhcCCCeE---EEEEecCCEEEEEEEE
Q 019996          113 ARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR--SFTGREKYKRRL-WATTALDNPSV---EMVMLSTSVLSIKWTL  183 (332)
Q Consensus       113 irqL~~Di~~l-regn--rt~sIYApDV~FKDPFN--sFrGrerYkri~-~M~~~L~nPrf---em~m~s~dti~irWtL  183 (332)
                      +++|++...++ -.+|  ...++|++|+.|.||+.  .++|++.+++.+ .+.........   .+....++.+...|++
T Consensus         7 ~~~~v~~y~~a~~~~D~d~~~~l~~~d~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (125)
T d1oh0a_           7 VQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGGGKVRACLTGPVRASHNGCGAMPFRV   86 (125)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEESSTTSCCEEHHHHHHHHHHHHHSSSCCEEEESSCCEECSSSEEEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHhCCCEEEECCCCCcccccHHHHHHHHHHHHHhcccceEEEEEEEEcCCCEEEEEEEE
Confidence            34444444444 3444  58999999999999985  489999999998 65555543333   2234456667777888


Q ss_pred             eeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC
Q 019996          184 RGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA  226 (332)
Q Consensus       184 sg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~  226 (332)
                      .+...      +..+.++|.+.+++|. +|||.+|++|||.+.
T Consensus        87 ~~~~~------g~~~~~~~~~~~~~d~-dGkI~~~~~y~d~~~  122 (125)
T d1oh0a_          87 EMVWN------GQPCALDVIDVMRFDE-HGRIQTMQAYWSEVN  122 (125)
T ss_dssp             EEESS------SSEEEEEEEEEEEECT-TSCEEEEEEECCGGG
T ss_pred             Eeccc------cceEEEEEEEEEEECC-CCeEEEEEEEECHHH
Confidence            76533      5557799999999999 999999999999864

>d1ohpa1 d.17.4.3 (A:1-125) Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI {Comamonas testosteroni, also known as Pseudomonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Ketosteroid isomerase-like
domain: Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI
species: Comamonas testosteroni, also known as Pseudomonas testosteroni [TaxId: 285]

Probab=99.22  E-value=3.5e-11  Score=90.87  Aligned_cols=107  Identities=14%  Similarity=0.198  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHH-HhCC--ccccccccceEeeCCccc--ccchHHHHHHH-HHhhhcCCCeE-EEEEecCCEEEEEEEEee
Q 019996          113 ARQLVRDILEL-REGN--RALGTFAVSVKYKDPTRS--FTGREKYKRRL-WATTALDNPSV-EMVMLSTSVLSIKWTLRG  185 (332)
Q Consensus       113 irqL~~Di~~l-regn--rt~sIYApDV~FKDPFNs--FrGrerYkri~-~M~~~L~nPrf-em~m~s~dti~irWtLsg  185 (332)
                      ++++++...+. -++|  ...++|++|+.|.||...  ..|++.++..+ .+........+ ......++.+.+.|+..+
T Consensus         7 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~p~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (125)
T d1ohpa1           7 MTAVVQRYVAALNAGDLDGIVALFADDATVENPVGSEPRSGTAAIREFYANSLKLPLAVELTQEVRAVANEAAFAFIVSF   86 (125)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHTTEEEEEEEESSTTSCCEESHHHHHHHHHHHTSSCCEEEECSCCEEETTEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHhCCceEEecCccCcccccHHHHHHHHHHHhhcCCceEEEEEEEEecceEEEEEEEEE
Confidence            34444444444 4555  489999999999999866  89999999998 66665555444 223456788899999988


Q ss_pred             eeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC
Q 019996          186 KPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA  226 (332)
Q Consensus       186 ~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~  226 (332)
                      ...      |+.+.++|...+++|. +|||++++||||.+.
T Consensus        87 ~~~------g~~~~~~~~~~~~~d~-dGkI~~~~~y~d~~~  120 (125)
T d1ohpa1          87 EYQ------GRKTVVAPIDHFRFNG-AGKVVSMRALFGEKN  120 (125)
T ss_dssp             EET------TEEEEECCEEEEEECT-TSCEEEEEEECCGGG
T ss_pred             ecC------CceEEEEEEEEEEECC-CCeEEEEEEEECHHH
Confidence            643      5567899999999999 999999999999864

>d2a15a1 d.17.4.3 (A:5-136) Hypothetical protein Rv0760c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Ketosteroid isomerase-like
domain: Hypothetical protein Rv0760c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.21  E-value=1.2e-10  Score=88.86  Aligned_cols=111  Identities=18%  Similarity=0.202  Sum_probs=82.0

Q ss_pred             chhHHHHHHHHHHHHHHHHhCC--ccccccccceEeeCCccc---------ccchHHHHHHHHHhhhcCCCeE---EEEE
Q 019996          106 SPLVESTARQLVRDILELREGN--RALGTFAVSVKYKDPTRS---------FTGREKYKRRLWATTALDNPSV---EMVM  171 (332)
Q Consensus       106 Sp~VE~tirqL~~Di~~lregn--rt~sIYApDV~FKDPFNs---------FrGrerYkri~~M~~~L~nPrf---em~m  171 (332)
                      ||+++. +|.+-   .++..||  -..++|++|+.|.||.+.         .+|++.++..+.+...-.+..+   ....
T Consensus         3 ~p~~~~-~~~~~---~a~~~~D~~~~~~l~a~D~~~~~P~~~~~~~~~~~~~~G~~ai~~~~~~~~~~~~~~~~~~~~~~   78 (132)
T d2a15a1           3 SPALIA-SQSSW---RCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANRLTVTCEETFP   78 (132)
T ss_dssp             CHHHHH-HHHHH---HHHHTTCHHHHHHTEEEEEEEESSSSSBTTBTTSSCEESHHHHHHHHHHHTTTTTCEEEEEEEEE
T ss_pred             chHHHH-HHHHH---HHHHcCCHHHHHHHcCCCeEEEccCCccccCccchheehHHHHHHhhhhhhccccceEEEEEEEE
Confidence            555443 33333   3446666  489999999999999854         7899999999833333334444   2222


Q ss_pred             -ecCCEEEEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC
Q 019996          172 -LSTSVLSIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA  226 (332)
Q Consensus       172 -~s~dti~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~  226 (332)
                       .+++.+...|+..+..+    . |..+.++|.+.++||+ +|||++++||||...
T Consensus        79 ~~~~~~v~~~~~~~~~~~----~-G~~~~~~~v~~~~~~~-dGkI~~~~~y~D~~~  128 (132)
T d2a15a1          79 SSSPDEIAHILVLHSEFD----G-GFTSEVRGVFTYRVNK-AGLITNMRGYWNLDM  128 (132)
T ss_dssp             CSSTTEEEEEEEEEEEET----T-TEEEEEEEEEEEEECT-TSCEEEEEEECCGGG
T ss_pred             ecCCcEEEEEEEEeeccc----c-ceeEEEEEEEEEEEcC-CCeEEEEEEEECccc
Confidence             57789999999988766    2 5557899999999998 999999999999754

>d1z1sa1 d.17.4.10 (A:1-129) Uncharacterized protein PA3332 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PhzA/PhzB-like
domain: Uncharacterized protein PA3332
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.92  E-value=2.3e-09  Score=81.37  Aligned_cols=107  Identities=16%  Similarity=0.193  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHHHHhCCc--cccccccceEeeCCcc------cccchHHHHHHH-HHhhhcCCCeE--EEE-EecCCEE
Q 019996          110 ESTARQLVRDILELREGNR--ALGTFAVSVKYKDPTR------SFTGREKYKRRL-WATTALDNPSV--EMV-MLSTSVL  177 (332)
Q Consensus       110 E~tirqL~~Di~~lregnr--t~sIYApDV~FKDPFN------sFrGrerYkri~-~M~~~L~nPrf--em~-m~s~dti  177 (332)
                      ++++++..+-+   ..||.  ..++|++||.|.+|..      .++|++.+++.+ .+...+.....  ... ..+++.+
T Consensus         4 ~eiv~~~~~~~---~~gD~~~~~~l~a~D~v~~~p~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~~~v   80 (129)
T d1z1sa1           4 KEILVHSLRLL---ENGDARGWCDLFHPEGVLEFPYAPPGWKTRFEGRETIWAHMRLFPEHLTVRFTDVQFYETADPDLA   80 (129)
T ss_dssp             HHHHHHHHHHH---HTTCHHHHHHTEEEEEEEECSSCCTTSCCEEESHHHHHHTTTTGGGTEEEEECCCEEECCSSTTEE
T ss_pred             HHHHHHHHHHH---HcCCHHHHHHHhcCceEEEEecCCcccceEEeCHHHHHHHHHhhhhccccccceeEEEEEecCCEE
Confidence            34555554433   67774  8999999999999865      589999999998 66666643222  222 2467889


Q ss_pred             EEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          178 SIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       178 ~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      .++|+.+++.+    ..|..+.+++.+-++|+  +|+|+++++|||..
T Consensus        81 ~~~~~~~~~~~----~~G~~~~~~~~~~~~~~--dGkI~~~~~y~D~~  122 (129)
T d1z1sa1          81 IGEFHGDGVAT----VSGGKLAQDYISVLRTR--DGQILLYRDFWNPL  122 (129)
T ss_dssp             EEEEEEEEEET----TTCCEEEEEEEEEEEEE--TTEEEEEEEEECHH
T ss_pred             EEEEEEEeEEe----cCCeEEEEEEEEEEEEE--CCEEEEEEEEECHH
Confidence            99999999876    22556789999999995  59999999999964

>d2geya1 d.17.4.9 (A:2-145) Putative hydroxylase AclR {Streptomyces galilaeus [TaxId: 33899]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Putative hydroxylase AclR
species: Streptomyces galilaeus [TaxId: 33899]

Probab=98.91  E-value=1e-08  Score=81.29  Aligned_cols=115  Identities=10%  Similarity=0.183  Sum_probs=88.2

Q ss_pred             HHHHHHHHHHH-hCC--ccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEEEeeee
Q 019996          114 RQLVRDILELR-EGN--RALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWTLRGKP  187 (332)
Q Consensus       114 rqL~~Di~~lr-egn--rt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWtLsg~l  187 (332)
                      ++|++.+.++. .||  ...++|+|||.|.||-+. .|.+.++.++ .+++.+.+.++++.  ..+++.+..+|+++++.
T Consensus         6 ~~l~~~~~~A~n~~D~~~~~~~~a~d~v~~~~~~~-~G~~~~~~~~~~~~~~~pd~~~~~~~~~~~g~~v~~~~~~~gt~   84 (144)
T d2geya1           6 KALCLEMVAAWNRWDLSGIIKHWSPDIVHYSEDNE-VSSADMVKLMEGGLKAFPDLQLEVKSIMAEEDRVALRITVTATH   84 (144)
T ss_dssp             HHHHHHHHHHHHTTCTHHHHTTEEEEEEEEETTEE-ECHHHHHHHHHHHHHHSTTCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHhCcccccccCCcc-cCHHHHHHHHHHHHHhcccccceeeeEEeccccceeEeeeeeec
Confidence            34445544443 333  589999999999999766 4999999998 88889998888553  36789999999999987


Q ss_pred             Ccccc---ccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH
Q 019996          188 KSIIA---NIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA  233 (332)
Q Consensus       188 klPwA---~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa  233 (332)
                      .-+|-   +.|.++.+.|++.++|.  +|||++|.+|||..  +.++|+
T Consensus        85 ~g~~~~~~~tGk~v~~~~~~~~~~~--dGkI~e~~~~~D~~--~~~~QL  129 (144)
T d2geya1          85 QGEFMGVQPTGQRVSWHLVEELRFV--DGKVVEHWDVINMR--PLLVRL  129 (144)
T ss_dssp             CSCBTTBCCCCCEEEEEEEEEEEEE--TTEEEEEEEEEECH--HHHHHT
T ss_pred             ccccccccCCCCceeEEEEEEEEEE--CCEEEEEEEeeCHH--HHHHHC
Confidence            74431   12345779999999994  69999999999964  455664

>d1s5aa_ d.17.4.10 (A:) Hypothetical protein YesE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PhzA/PhzB-like
domain: Hypothetical protein YesE
species: Bacillus subtilis [TaxId: 1423]

Probab=98.90  E-value=5.5e-09  Score=80.83  Aligned_cols=101  Identities=9%  Similarity=0.127  Sum_probs=79.7

Q ss_pred             HHHHHHHhCC--ccccccccceEeeCCcc------cccchHHHHHHH-HHhhhcCCCeEE---EE-EecCCEEEEEEEEe
Q 019996          118 RDILELREGN--RALGTFAVSVKYKDPTR------SFTGREKYKRRL-WATTALDNPSVE---MV-MLSTSVLSIKWTLR  184 (332)
Q Consensus       118 ~Di~~lregn--rt~sIYApDV~FKDPFN------sFrGrerYkri~-~M~~~L~nPrfe---m~-m~s~dti~irWtLs  184 (332)
                      +=+.++.+||  ...++|++|+.|.+|.-      .++|+++++..+ .+...+...+++   +. ..+++++.++|+..
T Consensus        13 ~~~~a~~~~D~~~~~~l~~eD~v~~~p~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~~~~~~~   92 (139)
T d1s5aa_          13 KFMAYMLEKDMKSWTELWDENAVFEFPYAPEGSPKRIEGKAAIYDYIKDYPKQIHLSSFTAPTVYRSADSNTVIAEFQCD   92 (139)
T ss_dssp             HHHHHHHTTCHHHHHTTEEEEEEEECTTCCTTSCSEEESHHHHHHHHTTHHHHEEEEEECCCEEEEBSSSSEEEEEEEEE
T ss_pred             HHHHHHHcCCHHHHHHHhCCceEEEEccCCccccceecchHHHHHhhhhchhhcccceeeEEEeeeeecCccceeEEEee
Confidence            3344556777  47899999999998763      589999999998 888887766662   22 35678999999999


Q ss_pred             eeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccC
Q 019996          185 GKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDL  224 (332)
Q Consensus       185 g~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~  224 (332)
                      ++.+.    .|..+.+++.+.+++.  +|+|++++||||.
T Consensus        93 ~~~~~----tG~~~~~~~~~~~~~~--dGkI~~~~~y~D~  126 (139)
T d1s5aa_          93 GHVIE----TGLPYRQSYISVIETR--DGRIVRYRDYWNP  126 (139)
T ss_dssp             EEETT----TCCBCCCEEEEEEEEE--TTEEEEEEEEECH
T ss_pred             ccccc----ccccceeeEEEEEEEE--CCEEEEEEEEECH
Confidence            98762    1445679999999994  6999999999994

>d1nwwa_ d.17.4.8 (A:) Limonene-1,2-epoxide hydrolase {Rhodococcus erythropolis [TaxId: 1833]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Limonene-1,2-epoxide hydrolase-like
domain: Limonene-1,2-epoxide hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

Probab=98.88  E-value=4.6e-09  Score=83.39  Aligned_cols=110  Identities=16%  Similarity=0.257  Sum_probs=86.3

Q ss_pred             HHHHHHHHHHHHhC-C--ccccccccceEeeC-CcccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEEEee
Q 019996          113 ARQLVRDILELREG-N--RALGTFAVSVKYKD-PTRSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWTLRG  185 (332)
Q Consensus       113 irqL~~Di~~lreg-n--rt~sIYApDV~FKD-PFNsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWtLsg  185 (332)
                      -++|++.+.++++. |  ...++|++||.|.| |...++|++.+++.+ .+...+.+.++++.  ..+++.+.+.|....
T Consensus        20 ~~~lv~~~~~A~~~~D~~~~~~~~~~D~~~~~~~~~~~~G~e~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~~~~~~~   99 (145)
T d1nwwa_          20 DEKIVLEFMDALTSNDAAKLIEYFAEDTMYQNMPLPPAYGRDAVEQTLAGLFTVMSIDAVETFHIGSSNGLVYTERVDVL   99 (145)
T ss_dssp             HHHHHHHHHHHGGGCCHHHHHTTBCSSCEEEETTSCCEESHHHHHHHHHHHHHHEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHhccceEecCCcccccCHHHHHHHHHhhhhhcccccceEEEEEecCceEEEEEeeec
Confidence            34566666666433 3  58999999999998 556699999999999 77888888887664  367899999999887


Q ss_pred             eeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCc
Q 019996          186 KPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASS  228 (332)
Q Consensus       186 ~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~d  228 (332)
                      ...    +.|..+.+.+.+-+++.  +|||++++||||.....
T Consensus       100 ~~~----~~G~~~~~~~~~~~~~~--DGKI~~~~~Y~D~~~~~  136 (145)
T d1nwwa_         100 RAL----PTGKSYNLSILGVFQLT--EGKITGWRDYFDLREFE  136 (145)
T ss_dssp             EET----TTCCEEEEEEEEEEEEE--TTEEEEEEEECCHHHHH
T ss_pred             ccc----cCCceeEEEEEEEEEEc--CCEEEEEEEEeCHHHHH
Confidence            655    22455679999999995  69999999999976543

>d3ebta1 d.17.4.9 (A:1-131) Uncharacterized protein BPSS0132 {Burkholderia pseudomallei [TaxId: 28450]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Uncharacterized protein BPSS0132
species: Burkholderia pseudomallei [TaxId: 28450]

Probab=98.80  E-value=2.7e-08  Score=75.94  Aligned_cols=106  Identities=18%  Similarity=0.264  Sum_probs=80.9

Q ss_pred             HHHHHHHHHH-HhCC--ccccccccceEeeCCcc--------cccchHHHHHHH-HHhhhcCCCeEEE--EEecCCEEEE
Q 019996          114 RQLVRDILEL-REGN--RALGTFAVSVKYKDPTR--------SFTGREKYKRRL-WATTALDNPSVEM--VMLSTSVLSI  179 (332)
Q Consensus       114 rqL~~Di~~l-regn--rt~sIYApDV~FKDPFN--------sFrGrerYkri~-~M~~~L~nPrfem--~m~s~dti~i  179 (332)
                      +++++.+.++ ..||  ...++|++||.|.+|..        .++|++.++..+ .+........++.  ...+++.+.+
T Consensus         5 ~~~v~~~~~a~~~~D~~~~~~~~a~D~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~   84 (131)
T d3ebta1           5 MQTVRESYEAFHRRDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTHIAEMRLAPDEFIESGERIVV   84 (131)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECGGGGGGTCCEEEEHHHHHHHHHHHGGGTEEEEEEEEEEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHhCcceEEEEcCCCcccCccccccchHHHHHhhhhhccccCcceeeEEEEEeccceEEE
Confidence            3444444444 4454  48899999999998853        689999999998 6666666666644  2368899999


Q ss_pred             EEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCC
Q 019996          180 KWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSA  226 (332)
Q Consensus       180 rWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~  226 (332)
                      .|+++++.+    . |..+.+++...+++.  +|+|++++||||.+.
T Consensus        85 ~~~~~~~~~----~-G~~~~~~~~~~~~~~--dGkI~~~~~y~D~~~  124 (131)
T d3ebta1          85 LGTRRVTAV----N-GRSATLKFVHVWRFE--NGRAVTFEDHFDTAE  124 (131)
T ss_dssp             EEEEEEEET----T-SCEEEEEEEEEEEEE--TTEEEEEEEECCHHH
T ss_pred             EEEEEEEec----C-CCeeEEEEEEEEEEE--CCEEEEEEEEECHHH
Confidence            999999855    1 444679999999994  699999999999753

>d2f99a1 d.17.4.9 (A:2-141) Aklanonic acid methyl ester cyclase, AknH {Streptomyces galilaeus [TaxId: 33899]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Aklanonic acid methyl ester cyclase, AknH
species: Streptomyces galilaeus [TaxId: 33899]

Probab=98.77  E-value=5.8e-08  Score=76.84  Aligned_cols=118  Identities=11%  Similarity=0.168  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHHHhCCccccccccceEeeCCc--ccccchHHHHHHH-HHhhhcCC-CeEEE--EEecCCEEEEEEEEe
Q 019996          111 STARQLVRDILELREGNRALGTFAVSVKYKDPT--RSFTGREKYKRRL-WATTALDN-PSVEM--VMLSTSVLSIKWTLR  184 (332)
Q Consensus       111 ~tirqL~~Di~~lregnrt~sIYApDV~FKDPF--NsFrGrerYkri~-~M~~~L~n-Prfem--~m~s~dti~irWtLs  184 (332)
                      ++||.+..-+. -..-+...++|++|+.+.+|.  ...+|++.|+..+ .+...+.+ ..++.  ...+++.+.++|+++
T Consensus         5 a~vr~~~~a~~-~gd~d~~~~~~~~D~~~~~~~~~~~~~G~e~~~~~~~~~~~~fpd~~~~~~~~~~~~gd~V~~~~~~~   83 (140)
T d2f99a1           5 AAVRRMVEAYN-TGKTDDVADYIHPEYMNPGTLEFTSLRGPELFAINVAWVKKTFSEEARLEEVGIEERADWVRARLVLY   83 (140)
T ss_dssp             HHHHHHHHHHH-HCCCTTGGGTEEEEEECGGGTTTCCCCHHHHHHHHHHHHHHHHCTTCEEEEEEEEEETTEEEEEEEEE
T ss_pred             HHHHHHHHHHH-cCCHHHHHHhcCceEEEecCCCCCCccCHHHHHHHHHHHhhcCCcceEEEEEEEecCCCEEEEEEEEE
Confidence            45666664333 234457899999999999986  4589999999998 66777754 56644  335689999999999


Q ss_pred             eeeCcccc---ccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH
Q 019996          185 GKPKSIIA---NIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA  233 (332)
Q Consensus       185 g~lklPwA---~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa  233 (332)
                      |+..-+|-   +.|.++.+.|++-+++.  +|||+++.+|||.  ...++|+
T Consensus        84 gt~~g~~~g~~~tG~~v~~~~~~~~~~~--dGkI~e~~~~~D~--~~~~~QL  131 (140)
T d2f99a1          84 GRHVGEMVGMAPTGRLFSGEQIHLLHFV--DGKIHHHRDWPDY--QGTYRQL  131 (140)
T ss_dssp             EECCSCBTTBCCCCCEEEEEEEEEEEEE--TTEEEEEEEEECH--HHHHHHT
T ss_pred             ecccccccccCCCCCeEEEEEEEeeEEE--CCEEEEEEEeeCH--HHHHHHC
Confidence            98763331   22445789999999994  6999999999996  3344443

>d3dm8a1 d.17.4.20 (A:1-135) Uncharacterized protein Rpa4348 {Rhodopseudomonas palustris [TaxId: 1076]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Rpa4348-like
domain: Uncharacterized protein Rpa4348
species: Rhodopseudomonas palustris [TaxId: 1076]

Probab=98.74  E-value=2.2e-08  Score=77.90  Aligned_cols=115  Identities=9%  Similarity=0.022  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHH-hCC--ccccccccceEeeCCc--------ccccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEE
Q 019996          112 TARQLVRDILELR-EGN--RALGTFAVSVKYKDPT--------RSFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVL  177 (332)
Q Consensus       112 tirqL~~Di~~lr-egn--rt~sIYApDV~FKDPF--------NsFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti  177 (332)
                      ...+|++.+-+++ .||  ...++|++|+.|..|-        -.++|++.+++.+ .+...+...++++.  ..+++.+
T Consensus         5 ~~~~~~~~~y~A~~~~d~d~~~~l~~~D~~~~~~g~~~~~P~~G~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v   84 (135)
T d3dm8a1           5 SLWRFSRALHRALNDRQTEELATIIDDNIDWAIYGPIDMFPFFGARQGKAAVLEVCRQIADSVRIYRYHRESVMLGIDSA   84 (135)
T ss_dssp             HHHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEESCTTTCTTCEEEESHHHHHHHHHHHHHHEEEEEEEEEEEEECSSEE
T ss_pred             hHHHHHHHHHHHHhcCCHHHHHHhcCcceEEEccccccccccccccccchhhhhhhhhccccccceeeeeeeEEecCceE
Confidence            3566667766664 343  5899999999998763        3789999999998 77888887777553  3688999


Q ss_pred             EEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHHH
Q 019996          178 SIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARAF  234 (332)
Q Consensus       178 ~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQaf  234 (332)
                      .+.|+.+++.+.    .|..+.+++..-+++ . +|||++++||+|  ..+.+.|++
T Consensus        85 ~v~~~~~~~~~~----tG~~~~~~~~~~~~~-~-dGkI~~~~~y~D--~~~~~~q~~  133 (135)
T d3dm8a1          85 ASMVRYSLTAAG----TNRPISVRMALFTQF-Q-NGRLTNLRMVLD--TFDLVEQAL  133 (135)
T ss_dssp             EEEEEEEEEETT----TCCEEEEEEEEEEEE-E-TTEEEEEEEEEC--HHHHHHHHH
T ss_pred             EEEEEEeEEeec----cceEEEEEEEEEEEE-E-CCEEEEEEEEeC--HHHHHHHhh
Confidence            999999998773    144567999999999 4 699999999999  345677765

>d2bnga1 d.17.4.8 (A:13-144) Uncharacterized protein Mb2760 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Limonene-1,2-epoxide hydrolase-like
domain: Uncharacterized protein Mb2760
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.73  E-value=6.6e-08  Score=75.42  Aligned_cols=108  Identities=10%  Similarity=0.093  Sum_probs=79.8

Q ss_pred             HHHHHHHHH-HhCC--ccccccccceEeeCC-cccccchHHHHHHH-HHhhhcCCCeEEE--EEecCCEEEEEEEEeeee
Q 019996          115 QLVRDILEL-REGN--RALGTFAVSVKYKDP-TRSFTGREKYKRRL-WATTALDNPSVEM--VMLSTSVLSIKWTLRGKP  187 (332)
Q Consensus       115 qL~~Di~~l-regn--rt~sIYApDV~FKDP-FNsFrGrerYkri~-~M~~~L~nPrfem--~m~s~dti~irWtLsg~l  187 (332)
                      ++++...++ -.+|  ...++|++|+.|.+| ...++|++.+++.+ .+.... +.++++  ...+++.+...|+.+++.
T Consensus         7 ~~V~~f~~A~~~~D~d~~~~~~a~D~v~~~~~~~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~gd~v~~~~~~~~~~   85 (132)
T d2bnga1           7 RAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQGRV-GFEVKIHRIGADGAAVLTERTDALII   85 (132)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTTEEEECHHHHHHHHHTTTTTC-EEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHccCHHHHHHHhccchheeccccCCcchHHHHHHHHHhccccc-CcceEEEEeeccCCceEEEEEEEEEE
Confidence            444444444 3344  589999999999995 66999999999987 443332 233333  236789999999999875


Q ss_pred             CccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCCcHHHHH
Q 019996          188 KSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSASSPVARA  233 (332)
Q Consensus       188 klPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~dv~aQa  233 (332)
                      .      |.++.+++.+.+++.  +|||++|+||||..  +.++|+
T Consensus        86 ~------g~~~~~~~~~~~~v~--dGkI~~~~~y~D~~--~~~~~l  121 (132)
T d2bnga1          86 G------PLRVQFWVCGVFEVD--DGRITLWRDYFDVY--DMFKGL  121 (132)
T ss_dssp             T------TEEEEEEEEEEEEEE--TTEEEEEEEECCHH--HHHHHH
T ss_pred             C------CcEEEEEEEEEEEEc--CCEEEEEEEEeCHH--HHHHHH
Confidence            4      667889999999995  59999999999976  344443

>d1sjwa_ d.17.4.9 (A:) Nogalonic acid methyl ester cyclase SnoaL {Streptomyces nogalater [TaxId: 38314]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Nogalonic acid methyl ester cyclase SnoaL
species: Streptomyces nogalater [TaxId: 38314]

Probab=98.48  E-value=1.5e-06  Score=67.24  Aligned_cols=110  Identities=11%  Similarity=0.172  Sum_probs=81.2

Q ss_pred             HHHHHHHHHHHHHHhCC--ccccccccceEeeCCc--ccccchHHHHHHH-HHhhhcCCC-eEEE--EEecCCEEEEEEE
Q 019996          111 STARQLVRDILELREGN--RALGTFAVSVKYKDPT--RSFTGREKYKRRL-WATTALDNP-SVEM--VMLSTSVLSIKWT  182 (332)
Q Consensus       111 ~tirqL~~Di~~lregn--rt~sIYApDV~FKDPF--NsFrGrerYkri~-~M~~~L~nP-rfem--~m~s~dti~irWt  182 (332)
                      +++++..+-+   -+||  ....+|++|+.+-+|.  ....|++.+++++ .+...+.+- .+++  ...+++.+.++|+
T Consensus         5 eiv~~~~~a~---~~gd~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~~~~~   81 (142)
T d1sjwa_           5 EIVRRMVSAF---NTGRTDDVDEYIHPDYLNPATLEHGIHTGPKAFAQLVGWVRATFSEEARLEEVRIEERGPWVKAYLV   81 (142)
T ss_dssp             HHHHHHHHHH---HHCCCTTGGGTEEEEEECGGGGGGTCCSHHHHHHHHHHHHHHHHCTTCEEEEEEEEEETTEEEEEEE
T ss_pred             HHHHHHHHHH---HcCCHHHHHHHhhhhEEEeccccccccchhHHHHHHHHHHHhhhcccccceEEEEEecCCEEEEEEE
Confidence            4455543322   3444  5899999999999886  4788899999988 666666553 3433  3357899999999


Q ss_pred             EeeeeCcccc---ccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          183 LRGKPKSIIA---NIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       183 Lsg~lklPwA---~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      ++|+..-+|-   +.+..+.+.|.+.+++.+  |+|+++.+|||..
T Consensus        82 ~~gt~~g~~~~~~~tGk~~~~~~~~~~~~~d--GkI~e~~~~~D~~  125 (142)
T d1sjwa_          82 LYGRHVGRLVGMPPTDRRFSGEQVHLMRIVD--GKIRDHRDWPDFQ  125 (142)
T ss_dssp             EEEECCSCBTTBCCCCCEEEEEEEEEEEEET--TEEEEEEEEECHH
T ss_pred             EEEcCcccceecCCCcceEEEEEEEEEEEEC--CEEEEEEEeccHH
Confidence            9998874331   124457899999999976  9999999999964

>d3dmca1 d.17.4.10 (A:1-133) Uncharacterized protein Ava2261 {Anabaena variabilis [TaxId: 1172]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PhzA/PhzB-like
domain: Uncharacterized protein Ava2261
species: Anabaena variabilis [TaxId: 1172]

Probab=98.48  E-value=2.4e-06  Score=66.69  Aligned_cols=110  Identities=12%  Similarity=0.130  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHH-HhCCc--cccccccceEeeCCcc----cccchHHHHHHH-HHhhhcCC--CeEEEE--EecCCEE
Q 019996          110 ESTARQLVRDILEL-REGNR--ALGTFAVSVKYKDPTR----SFTGREKYKRRL-WATTALDN--PSVEMV--MLSTSVL  177 (332)
Q Consensus       110 E~tirqL~~Di~~l-regnr--t~sIYApDV~FKDPFN----sFrGrerYkri~-~M~~~L~n--Prfem~--m~s~dti  177 (332)
                      .++++|+.+-+.++ .+||.  ..+++++|+.|--|-.    .++|+++++..+ .+...+.+  .++++.  ..+++.+
T Consensus        10 ~~~a~~~~e~f~~a~~~gD~d~~~~l~~~D~~~~~p~~~~~g~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v   89 (133)
T d3dmca1          10 LKVAHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGEFHGLNVGKERAKEFFTYVSESFHTGIQISSLDRVTSNETTV   89 (133)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCHHHHTTEEEEEEEEESSGGGBEEEESHHHHHHHHHHHHHTCTTCEEEEEEEEEEECSSEE
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHhccceEEEecCCCcccchhhHHHHHHHhhhcccccccccceeeEEEEecCCCEE
Confidence            45566666666554 56664  8999999999987753    368999999988 78888876  344443  4678999


Q ss_pred             EEEEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCCCC
Q 019996          178 SIKWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLSAS  227 (332)
Q Consensus       178 ~irWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S~~  227 (332)
                      .+.|+.+++..      |.++..++..-+++.  +|||++.+||||...-
T Consensus        90 vve~~~~~~~~------G~~~~~~~~~vf~v~--dGkI~~~reY~ds~~~  131 (133)
T d3dmca1          90 VFEFRDEGLFL------GKPYKNRVAVSFDVR--GDKICSYREYFGSDGK  131 (133)
T ss_dssp             EEEEEEEEEET------TEEEEEEEEEEEEEE--TTEEEEEEEEECSCSB
T ss_pred             EEEEEEEEeec------ceEEeccEEEEEEEE--CCEEEEEEEEECCCCc
Confidence            99999998743      555678888999994  5999999999998753

>d3en8a1 d.17.4.20 (A:1-127) Uncharacterized protein BxeB2092 {Burkholderia xenovorans [TaxId: 36873]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Rpa4348-like
domain: Uncharacterized protein BxeB2092
species: Burkholderia xenovorans [TaxId: 36873]

Probab=98.43  E-value=1.8e-06  Score=67.36  Aligned_cols=101  Identities=9%  Similarity=0.120  Sum_probs=71.4

Q ss_pred             HHHHHHHHHHHHH-HhCC--ccccccccceEeeCCcc--cccchHHHHHHH-HHhhhcCCCeEEEE--EecCCEEEEEEE
Q 019996          111 STARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR--SFTGREKYKRRL-WATTALDNPSVEMV--MLSTSVLSIKWT  182 (332)
Q Consensus       111 ~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFN--sFrGrerYkri~-~M~~~L~nPrfem~--m~s~dti~irWt  182 (332)
                      +-+|++++..-++ -.||  ...++|++|+.|.+|..  .++|++.++..+ .+...  ...+++.  ..+++.+.+.|+
T Consensus         4 e~~~~~v~~~~~A~~~gD~da~~~l~adD~v~~~p~~~~~~~G~e~i~~~~~~~~~~--~~~~~~~~~~~~g~~vv~~~~   81 (127)
T d3en8a1           4 EKIREALNAHWQASAAGDFDAEHDIYDDDAICDYPQSGERILGRMNLQALRSHHPGK--PAGFEVRRIQGEGNLWITEYS   81 (127)
T ss_dssp             HHHHHHHHHHHHHHHHTCHHHHTTTEEEEEEEEETTTTEEEESHHHHHHHHHHTTCS--CSEEEEEEEEEETTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHhcCCEEEEcCCcccccchHHHHHHHHHHHhcc--CccceeEEEecCCCEEEEEEE
Confidence            4456666666555 4455  48999999999999963  699999999877 22111  2334332  256888889998


Q ss_pred             EeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          183 LRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       183 Lsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                      ++..          ...+.+..-+++ . +|||++.++||+-.
T Consensus        82 ~t~~----------~~~~~~~~~f~~-~-dGkI~~~~~Y~~~~  112 (127)
T d3en8a1          82 ISYN----------GRPAYTVSIMEF-R-NGKVVHETQYFSDP  112 (127)
T ss_dssp             EEET----------TEEEEEEEEEEE-E-TTEEEEEEEEEECC
T ss_pred             ECCC----------CcceEEEEEEEE-E-CCEEEEEEEecCCC
Confidence            7642          245677888899 4 69999999999543

>d3ec9a1 d.17.4.10 (A:10-139) Uncharacterized protein BTHI0051 {Burkholderia thailandensis [TaxId: 57975]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PhzA/PhzB-like
domain: Uncharacterized protein BTHI0051
species: Burkholderia thailandensis [TaxId: 57975]

Probab=98.36  E-value=1.4e-06  Score=65.75  Aligned_cols=107  Identities=12%  Similarity=0.222  Sum_probs=77.9

Q ss_pred             HHHHHHHHHHHHHhC-C--ccccccccceEeeCCccc-----ccchHHHHHH-H-HHhhhcCCCeEEE--EEecCCEEEE
Q 019996          112 TARQLVRDILELREG-N--RALGTFAVSVKYKDPTRS-----FTGREKYKRR-L-WATTALDNPSVEM--VMLSTSVLSI  179 (332)
Q Consensus       112 tirqL~~Di~~lreg-n--rt~sIYApDV~FKDPFNs-----FrGrerYkri-~-~M~~~L~nPrfem--~m~s~dti~i  179 (332)
                      +.+||++.+..+... |  ...++++|||.|.+|-+.     +.|.+...+. + .+...+.+-++++  ....++.+.+
T Consensus         3 t~~~iv~~~~~A~~~~D~d~~~~~~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   82 (130)
T d3ec9a1           3 TPYQIVADHYAASDRHDPAAMMADIAPAIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGYTFKLDALHDAGDTVIG   82 (130)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECTTSTTCEEECSHHHHHHHTHHHHHHHEEEEEEEEEEEEEETTEEEE
T ss_pred             CHHHHHHHHHHHHHCcCHHHHHHhcCcccEEEecCCceecccEEcchhHHhHHhhhhhcccccceeeeEEEEecCCeeEE
Confidence            456777777777443 3  488999999999887652     4566665444 4 4556666656644  3367888899


Q ss_pred             EEEEeeeeCccccccCCceEEeeeeEEEEeCCCCcEEEEeeeccC
Q 019996          180 KWTLRGKPKSIIANIGGDLIVKVYSKFTLNQISGQVIEHEELWDL  224 (332)
Q Consensus       180 rWtLsg~lklPwA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~  224 (332)
                      .|+.+++.+    ..|..+.+++...++++  +|||+++++|||.
T Consensus        83 ~~~~~~~~~----~tG~~~~~~~~~~~~~~--dGkI~~~~~y~D~  121 (130)
T d3ec9a1          83 VGRYSGTYR----RTGKSFECRVAHVWRVD--AGKIVHFEQFTDT  121 (130)
T ss_dssp             EEEEEEEET----TTCCEEEEEEEEEEEEE--TTEEEEEEEEEBH
T ss_pred             EEEEEEEEe----CCCCEEEEEEEEEEEEE--CCEEEEEEEEeCH
Confidence            999998766    22445779999999994  5999999999993

>d1tuha_ d.17.4.11 (A:) Hypothetical protein egc068 from a soil-derived mobile gene cassette {uncultured organism [TaxId: 155900]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Hypothetical protein egc068 from a soil-derived mobile gene cassette
domain: Hypothetical protein egc068 from a soil-derived mobile gene cassette
species: uncultured organism [TaxId: 155900]

Probab=98.14  E-value=2.1e-05  Score=59.15  Aligned_cols=97  Identities=19%  Similarity=0.194  Sum_probs=68.5

Q ss_pred             HHHhCC--ccccccccceEeeCCcc-----cccchHHHHHHH-HHhhhcCC-CeEEE--EEecCCEEEEEEEEeeeeCcc
Q 019996          122 ELREGN--RALGTFAVSVKYKDPTR-----SFTGREKYKRRL-WATTALDN-PSVEM--VMLSTSVLSIKWTLRGKPKSI  190 (332)
Q Consensus       122 ~lregn--rt~sIYApDV~FKDPFN-----sFrGrerYkri~-~M~~~L~n-Prfem--~m~s~dti~irWtLsg~lklP  190 (332)
                      ++-.||  ...+++++||.|..|-.     .++|++.+.+.+ .+...+.+ ..++.  ....++...+.|...+..+  
T Consensus        16 a~~~~D~~~~~~l~~~D~~~~~~~~~p~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--   93 (131)
T d1tuha_          16 AFNSGDMKTLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRYGGETGGTFKAVLLHVLKSDDGRVIGIHRNTAER--   93 (131)
T ss_dssp             HHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHHHHTTTTCCEEEEEEEEECTTSCEEEEEEEEEEE--
T ss_pred             HHHcCCHHHHHHhcCCCEEEEecCCCCcccccccHHHHHHHHHhhhhhcCCCceEEEEEEEecCCEEEEEEEEEEeec--
Confidence            335555  48899999999998854     578999999998 66666654 34433  2344554445555444433  


Q ss_pred             ccccCCceEEeeeeEEEEeCCCCcEEEEeeeccCC
Q 019996          191 IANIGGDLIVKVYSKFTLNQISGQVIEHEELWDLS  225 (332)
Q Consensus       191 wA~~ggrl~I~G~Se~~LN~isGlVvsHiDyWD~S  225 (332)
                         .|..+..++...+++.  +|||+++.||||..
T Consensus        94 ---~G~~~~~~~~~v~~~~--dGkI~~~~~y~d~~  123 (131)
T d1tuha_          94 ---GGKRLDVGCCIVFEFK--NGRVIDGREHFYDL  123 (131)
T ss_dssp             ---TTEEEEEEEEEEEEEE--TTEEEEEEEEESSH
T ss_pred             ---ccccceeeEEEEEEEE--CCEEEEEEEEeCCH
Confidence               1555678899999994  69999999999965

>d1m98a2 d.17.4.6 (A:176-317) Orange carotenoid protein, C-terminal domain {Cyanobacteria (Arthrospira maxima) [TaxId: 129910]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Orange carotenoid protein, C-terminal domain
domain: Orange carotenoid protein, C-terminal domain
species: Cyanobacteria (Arthrospira maxima) [TaxId: 129910]

Probab=97.71  E-value=2.6e-05  Score=64.65  Aligned_cols=86  Identities=22%  Similarity=0.234  Sum_probs=60.2

Q ss_pred             ccccccccceEeeCCcc-cccchHHHHHHH-HHhhhcCC-CeE-EEEEecCCEEEEEEEEeeeeCccccccCCceEEeee
Q 019996          128 RALGTFAVSVKYKDPTR-SFTGREKYKRRL-WATTALDN-PSV-EMVMLSTSVLSIKWTLRGKPKSIIANIGGDLIVKVY  203 (332)
Q Consensus       128 rt~sIYApDV~FKDPFN-sFrGrerYkri~-~M~~~L~n-Prf-em~m~s~dti~irWtLsg~lklPwA~~ggrl~I~G~  203 (332)
                      .+.++|++|+.+.||+. .+.|++.+++.+ .....+.- |.. ......+....++|+  |+...||.  |..+.++..
T Consensus        39 ~~~~lFa~Dav~~~P~~~p~~G~eaI~~f~~~~~~~~~~~p~~g~~~~~~~g~~~v~vt--gkV~~~~~--G~~~~vn~a  114 (142)
T d1m98a2          39 NLISLFAEDGALQPPFQKPIVGKENTLRFFREECQNLKLIPERGVSEPTEDGYTQIKVT--GKVQTPWF--GGNVGMNIA  114 (142)
T ss_dssp             HHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHCTTCEEEEEEEEEEECGGGCEEEEEE--EEEECTTT--GGGCCEEEE
T ss_pred             HHHHHcCCCeEEeCCCCccccCHHHHHHHHHHhcccceecccceeeEeecCCcEEEEEE--EEEecCCC--CcceeeeeE
Confidence            58899999999999986 589999988876 43333321 222 223345555667776  44445562  455679999


Q ss_pred             eEEEEeCCCCcEEEE
Q 019996          204 SKFTLNQISGQVIEH  218 (332)
Q Consensus       204 Se~~LN~isGlVvsH  218 (332)
                      ..|+||+ +|+|++=
T Consensus       115 ~~F~ln~-~GkI~~v  128 (142)
T d1m98a2         115 WRFLLNP-ENKVFFV  128 (142)
T ss_dssp             EEEEECT-TSCEEEE
T ss_pred             EEEEECC-CCcEEEE
Confidence            9999999 9999864

>d2k54a1 d.17.4.29 (A:1-123) Uncharacterized protein Atu0742 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Atu0742-like
domain: Uncharacterized protein Atu0742
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.65  E-value=0.00045  Score=52.71  Aligned_cols=92  Identities=11%  Similarity=0.027  Sum_probs=68.4

Q ss_pred             HhCC--ccccccccceEeeCCc--ccccchHHHHHHH-HHhhhcCCCeEEE--EEecCCEEEEEEEEeeeeCccccccCC
Q 019996          124 REGN--RALGTFAVSVKYKDPT--RSFTGREKYKRRL-WATTALDNPSVEM--VMLSTSVLSIKWTLRGKPKSIIANIGG  196 (332)
Q Consensus       124 regn--rt~sIYApDV~FKDPF--NsFrGrerYkri~-~M~~~L~nPrfem--~m~s~dti~irWtLsg~lklPwA~~gg  196 (332)
                      ..||  ...++|++||.|.+|-  ....|++.++..+ .++. ..+..+++  ....++.+...|++++..+      ++
T Consensus        17 ~~~D~e~~~~~~aeD~~~~~~~~~~~~~g~~~i~~~~~~~~~-~~~~~~~~~~~~~~gd~vv~~~~~~~~~~------g~   89 (123)
T d2k54a1          17 NARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIERFK-EPDLYGELLTRVIVGNVVIDHETVTRNFP------EG   89 (123)
T ss_dssp             HHTCHHHHHHTEEEEEEEEETTTEEEEESHHHHHHHHHHHTT-CTTCEEEEEEEEEETTEEEEEEEEECCBT------TB
T ss_pred             hCCCHHHHHHhcCCCeEEEcCCCcceechHHHHHHHHHhhhc-cccceeeeEEEEecCCEEEEEEEEEEEcC------CC
Confidence            5555  4889999999998864  3467888888887 4443 34555544  2357899999999999866      66


Q ss_pred             ceEEeeeeEEEEeCCCCcEEEE-eeeccC
Q 019996          197 DLIVKVYSKFTLNQISGQVIEH-EELWDL  224 (332)
Q Consensus       197 rl~I~G~Se~~LN~isGlVvsH-iDyWD~  224 (332)
                      ++.+++..-|+|.  +|+|+++ .|+|.+
T Consensus        90 ~~~~~~~~vf~~~--dGkI~r~~f~~~~p  116 (123)
T d2k54a1          90 KGEVDVACIYEVE--NGRIAKAWFKIGEP  116 (123)
T ss_dssp             CCEEEEEEEEEEE--TTEEEEEEEEEEEE
T ss_pred             eEEEEEEEEEEEE--CCEEEEEEEcCCCc
Confidence            6788999999995  5999985 466653

>d3d9ra1 d.17.4.27 (A:3-134) Uncharacterized protein ECA1476 {Pectobacterium atrosepticum [TaxId: 29471]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: ECA1476-like
domain: Uncharacterized protein ECA1476
species: Pectobacterium atrosepticum [TaxId: 29471]

Probab=96.91  E-value=0.0089  Score=44.31  Aligned_cols=104  Identities=13%  Similarity=0.133  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHH-HhCC--ccccccccceEeeCCcc-cccchHHHHHHH-HHhhhcC-CCeE---EEEEecCCEEEEEEE
Q 019996          112 TARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR-SFTGREKYKRRL-WATTALD-NPSV---EMVMLSTSVLSIKWT  182 (332)
Q Consensus       112 tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFN-sFrGrerYkri~-~M~~~L~-nPrf---em~m~s~dti~irWt  182 (332)
                      .|+++..-..++ -.||  ...++|++|+.|-.|-. .++|++.++..+ -.+.... ...+   ++...+++.+..+++
T Consensus         9 aI~~~~~~y~~A~~~~D~~~~~~l~t~Dav~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d~A~~~~~   88 (132)
T d3d9ra1           9 VIEAAAIAYLTAFNRADIPAVIATYTDDGVLMGPGRPAAVGKDELAEVYLSVFETVGFDMAYEIKEVVQTSADWAFVRSA   88 (132)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTSCCEESHHHHHHHHHHHHHHEEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEEccCCcceehHHHHHHHHHHHhhcCCcceeeeccceeeecCCceEEEEE
Confidence            444444445444 4455  58899999999986655 488999999987 3333322 1111   334467889888777


Q ss_pred             EeeeeCccccccCCceEEeeeeEEEE--eCCCC--cEEEE
Q 019996          183 LRGKPKSIIANIGGDLIVKVYSKFTL--NQISG--QVIEH  218 (332)
Q Consensus       183 Lsg~lklPwA~~ggrl~I~G~Se~~L--N~isG--lVvsH  218 (332)
                      .......+  +.++.+...|.....+  +. +|  ||.+|
T Consensus        89 ~~~~~~~~--~~g~~~~~~~~~~~v~~r~~-dG~Wki~~~  125 (132)
T d3d9ra1          89 TEGTETNK--ATGVVTPAAYQELFLLRKSA-TGSWQTARY  125 (132)
T ss_dssp             EEEEEEET--TTCCEEEEEEEEEEEEEECT-TSCEEEEEE
T ss_pred             EEEEEEec--CCCcceecceeEEEEEEECC-CCcEEEEEE
Confidence            76654432  2133345666666655  44 88  66554

>d2gxfa1 d.17.4.22 (A:1-128) Hypothetical protein YybH {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: YybH-like
domain: Hypothetical protein YybH
species: Bacillus subtilis [TaxId: 1423]

Probab=95.99  E-value=0.044  Score=41.01  Aligned_cols=102  Identities=7%  Similarity=0.104  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHH-HhCC--ccccccccceEeeC-CcccccchHHHHHHH-HHhhh-cCCCeE---EE-EEecCCEEE
Q 019996          109 VESTARQLVRDILEL-REGN--RALGTFAVSVKYKD-PTRSFTGREKYKRRL-WATTA-LDNPSV---EM-VMLSTSVLS  178 (332)
Q Consensus       109 VE~tirqL~~Di~~l-regn--rt~sIYApDV~FKD-PFNsFrGrerYkri~-~M~~~-L~nPrf---em-~m~s~dti~  178 (332)
                      ||+-||+|.....++ ..||  ...++|++|+.|-- |...++|++.|++.+ -++.. -..+.+   ++ ....++.+.
T Consensus         1 ~e~~I~~l~~~~~~A~~~~D~d~~~~l~~~Da~~~~~~g~~~~G~e~i~~~~~~~~~~~~~~~~~~~~~~~v~~~gD~A~   80 (128)
T d2gxfa1           1 MEQQLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEAGDTVL   80 (128)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCHHHHTTSEEEEEEEECSSSCEEEHHHHHHHHHHHTTSCCCSSCCCEEEEEEEEEETTEEE
T ss_pred             ChHHHHHHHHHHHHHHHcCCHHHHHHhhccCCcEecCCCcceeehHHHHHHHHHHHHhcccccceeecceeEeecCCceE
Confidence            477888888888877 4455  58999999988864 456889999999997 33332 233444   22 235677776


Q ss_pred             EEEEEeeeeCccccccCCceEEeeeeEEEEe-CCCCc
Q 019996          179 IKWTLRGKPKSIIANIGGDLIVKVYSKFTLN-QISGQ  214 (332)
Q Consensus       179 irWtLsg~lklPwA~~ggrl~I~G~Se~~LN-~isGl  214 (332)
                      ..-+.+.+.+.+    ++.....|.-++.|= +.+|+
T Consensus        81 ~~~~~~~~~~~~----~~~~~~~~~~t~v~~r~~dG~  113 (128)
T d2gxfa1          81 VLSQTLLDSDKK----DSEYAMERRATYVFKKNAQGE  113 (128)
T ss_dssp             EEEEEECCC-------------EEEEEEEEEECTTSC
T ss_pred             EEEEEEEEEcCC----CCcccceEEEEEEEEECCCCc
Confidence            655554443321    555667787777773 34784

>d3bb9a1 d.17.4.16 (A:27-147) Uncharacterized protein Sfri1973 {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SO0125-like
domain: Uncharacterized protein Sfri1973
species: Shewanella frigidimarina [TaxId: 56812]

Probab=95.44  E-value=0.062  Score=38.90  Aligned_cols=100  Identities=11%  Similarity=0.111  Sum_probs=60.1

Q ss_pred             hhHHHHHHHHHHHHHHHHhCC--ccccccccceEeeCCcccccchHHHHHHH--HHhhhcCCCeEEE---E-EecCCEEE
Q 019996          107 PLVESTARQLVRDILELREGN--RALGTFAVSVKYKDPTRSFTGREKYKRRL--WATTALDNPSVEM---V-MLSTSVLS  178 (332)
Q Consensus       107 p~VE~tirqL~~Di~~lregn--rt~sIYApDV~FKDPFNsFrGrerYkri~--~M~~~L~nPrfem---~-m~s~dti~  178 (332)
                      .+|++++++..+=+   ..||  ...++|+||+.|-.|--..+|++.|.+..  --...+...++++   + ...++.+.
T Consensus         3 ~a~~~v~~~~~~A~---~~~D~~~~~~l~a~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~gd~A~   79 (121)
T d3bb9a1           3 SAAGNVVKQFHAAL---QMGNEAIVRQSLAANVQIYEGGKVERSLTEYANHHMLADMAYLKGLTITPKEHQITITGDIAI   79 (121)
T ss_dssp             SHHHHHHHHHHHHH---HHTCHHHHHHHEEEEEEEEETTEEECSHHHHHHTHHHHHHHHHHTEEEEEEEEEEEEETTEEE
T ss_pred             hHHHHHHHHHHHHH---HcCCHHHHHHhhCCCeEEEeCCCccCcHHHHHHHHHhhhhhcccCceEEEEEEEEEEcCCeeE
Confidence            45666666655433   6677  58899999999999988889999998763  2234455555522   2 24566666


Q ss_pred             EEEEEeeeeCccccccCCceEEeeeeEEEE-eCCCC
Q 019996          179 IKWTLRGKPKSIIANIGGDLIVKVYSKFTL-NQISG  213 (332)
Q Consensus       179 irWtLsg~lklPwA~~ggrl~I~G~Se~~L-N~isG  213 (332)
                      ..-+.......+    ++.+...|.-+..+ =..+|
T Consensus        80 ~~~~~~~~~~~~----g~~~~~~~~~t~v~~r~~dG  111 (121)
T d3bb9a1          80 STSISHAQGEYK----GKSIDSMTMETLVLIKQADG  111 (121)
T ss_dssp             EEEEEEEEECCC------CEEEEEEEEEEEEECTTS
T ss_pred             EEEEEEEEeecc----CCcceeeEEEEEEEEEccCC
Confidence            655555444421    45555665433333 33377

>d2rgqa1 d.17.4.25 (A:1-133) Uncharacterized protein NpunR3134 {Nostoc punctiforme [TaxId: 272131]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Rv3472-like
domain: Uncharacterized protein NpunR3134
species: Nostoc punctiforme [TaxId: 272131]

Probab=94.51  E-value=0.49  Score=35.66  Aligned_cols=79  Identities=10%  Similarity=0.016  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHh---CCccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeE-----EEEEecCCEEEEE
Q 019996          110 ESTARQLVRDILELRE---GNRALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSV-----EMVMLSTSVLSIK  180 (332)
Q Consensus       110 E~tirqL~~Di~~lre---gnrt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrf-----em~m~s~dti~ir  180 (332)
                      +.-|++|...+..+..   .+...++|++|+.|..|...++|++.++..+ -+.........     -+...+++.+..+
T Consensus         8 r~~I~~L~~ry~~~~D~~d~~~~~~~FteDa~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~~H~~~n~~i~~~gd~A~~~   87 (133)
T d2rgqa1           8 KLEIMELAARFEMSLDKEDVENYLATFASDGALQGFWGIAKGKEELRQGFYAMLDTFARGKRHCSSNAIIQGNYDEATME   87 (133)
T ss_dssp             HHHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSEEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHHhhccCCcEEEcCCcccCCHHHHHHHHHHHhhhcccccceecCCeEEEEcCCEEEEE
Confidence            3457788877777643   3358999999999999999999999999987 33332222221     1122578899999


Q ss_pred             EEEeeeeC
Q 019996          181 WTLRGKPK  188 (332)
Q Consensus       181 WtLsg~lk  188 (332)
                      |.+.....
T Consensus        88 ~~~~~~~~   95 (133)
T d2rgqa1          88 SYLTVVNR   95 (133)
T ss_dssp             EEEEEEES
T ss_pred             EEEEEEec
Confidence            99987655

>d2rcda1 d.17.4.18 (A:1-127) Uncharacterized protein ECA3500 {Pectobacterium atrosepticum [TaxId: 29471]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: BxeB1374-like
domain: Uncharacterized protein ECA3500
species: Pectobacterium atrosepticum [TaxId: 29471]

Probab=93.73  E-value=0.51  Score=34.70  Aligned_cols=81  Identities=6%  Similarity=-0.089  Sum_probs=56.4

Q ss_pred             chhHHHHHHHHHHHHHHH-HhCC--ccccccccc--eEeeCCcccccchHHHHHHH-HHhhhcCCCeE---EEEEecCCE
Q 019996          106 SPLVESTARQLVRDILEL-REGN--RALGTFAVS--VKYKDPTRSFTGREKYKRRL-WATTALDNPSV---EMVMLSTSV  176 (332)
Q Consensus       106 Sp~VE~tirqL~~Di~~l-regn--rt~sIYApD--V~FKDPFNsFrGrerYkri~-~M~~~L~nPrf---em~m~s~dt  176 (332)
                      .|-+.+-|+.+.+.+.++ ..||  .+.++|++|  +.|-+|--.+.|.+.+++.+ ........-.+   .++...++.
T Consensus         8 ~~~~~aeI~a~~~~~~~A~~~~D~~~l~~l~a~D~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~d~   87 (127)
T d2rcda1           8 QADVLADVTAAFYRYEKALTGNDVAVLDELFWHDEKTVRYGAGENLYGIEEIRAFRLARPSAGLDRALRNTVITTYGHDM   87 (127)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHBCCSTTCEEEETTEEEESHHHHHHHHHHSCCTTCCCEEEEEEEEEBTTSE
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCHHHHHHhhcCCCcEEEeCCCcccccHHHHHHHHHhccccccceEeeeeEEEEeecch
Confidence            465666677777776664 5566  588999998  88888888899999999887 33332222222   456677888


Q ss_pred             EEEEEEEeee
Q 019996          177 LSIKWTLRGK  186 (332)
Q Consensus       177 i~irWtLsg~  186 (332)
                      +.+.+.+...
T Consensus        88 a~~~~~~~~~   97 (127)
T d2rcda1          88 AVASTEFTRT   97 (127)
T ss_dssp             EEEEEEEECS
T ss_pred             hhheeeeccc
Confidence            8888877654

>d3cu3a1 d.17.4.28 (A:9-170) Uncharacterized protein NpunR1993 {Nostoc punctiforme [TaxId: 272131]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: BaiE/LinA-like
domain: Uncharacterized protein NpunR1993
species: Nostoc punctiforme [TaxId: 272131]

Probab=93.70  E-value=0.22  Score=38.75  Aligned_cols=83  Identities=12%  Similarity=0.159  Sum_probs=59.2

Q ss_pred             chhHHHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCcc-cccchHHHHHHH-HHhhh-cCCCeE-----EEEEecC
Q 019996          106 SPLVESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPTR-SFTGREKYKRRL-WATTA-LDNPSV-----EMVMLST  174 (332)
Q Consensus       106 Sp~VE~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPFN-sFrGrerYkri~-~M~~~-L~nPrf-----em~m~s~  174 (332)
                      +++=|+-|++|.+....+ -.||  ...++|++|+.|-.|.. .+.|++.++..+ .++.. ..+..+     .++..++
T Consensus         2 ~tsDe~aI~al~~~~~~A~~~~D~d~~~~l~a~D~~~~~~~g~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~l~~   81 (162)
T d3cu3a1           2 TTADESAIRAFHRQMIDAWNRGSGEGFAAPFSETADFITFEGTHLKGRKEIAAFHQQAFDTVVKGTRLEGEVDFVRFVNS   81 (162)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCEEEHHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEEET
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCHHHHHHhhccCeeeecccccccCCHHHHHHHHHHHHhhcccceeEEeeceEEEEecC
Confidence            345567788888888777 3444  68999999999988874 788999999998 55543 344444     3445678


Q ss_pred             CEEEEEEEEeeeeC
Q 019996          175 SVLSIKWTLRGKPK  188 (332)
Q Consensus       175 dti~irWtLsg~lk  188 (332)
                      +.+.+........+
T Consensus        82 d~Avv~~~~~~~~~   95 (162)
T d3cu3a1          82 QLALMLVVIRVILP   95 (162)
T ss_dssp             TEEEEEEEEEEECT
T ss_pred             CEEEEEEEEEEeec
Confidence            88777776666544

>d3b7ca1 d.17.4.16 (A:1-121) Uncharacterized protein SO0125 {Shewanella oneidensis [TaxId: 70863]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SO0125-like
domain: Uncharacterized protein SO0125
species: Shewanella oneidensis [TaxId: 70863]

Probab=93.19  E-value=0.63  Score=33.46  Aligned_cols=78  Identities=9%  Similarity=-0.026  Sum_probs=49.9

Q ss_pred             chhHHHHHHHHHHHHHHHHhCC--ccccccccc--eEeeCCcccccchHHHHHHH-HHhh-hcCCCeE-----EEEEecC
Q 019996          106 SPLVESTARQLVRDILELREGN--RALGTFAVS--VKYKDPTRSFTGREKYKRRL-WATT-ALDNPSV-----EMVMLST  174 (332)
Q Consensus       106 Sp~VE~tirqL~~Di~~lregn--rt~sIYApD--V~FKDPFNsFrGrerYkri~-~M~~-~L~nPrf-----em~m~s~  174 (332)
                      +..|++++++..+-+   -+||  ...++|++|  +.|-.|-...+|++.++... -.+. .....++     .++..++
T Consensus         3 ~~eI~~~i~~~~~A~---~~gD~d~~~~~~~~d~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~   79 (121)
T d3b7ca1           3 TDDIVQLLKGQEEAW---NRGDLDAYMQGYWQNEQLMLISNGKFRNGWDETLAAYKKNYPDKESLGELKFTIKEIKMLSN   79 (121)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCHHHHHTTBCCSTTCEEECSSCEEECHHHHHHHHHHHCSSGGGSCEEEEEEEEEEEEET
T ss_pred             HHHHHHHHHHHHHHH---HcCCHHHHHHHHhccCcceEecCCcceecHHHHHHHHHHhhcccccccEEEEeeEEEEEcCC
Confidence            345666666666655   4666  477899999  45566777899999999976 3333 2333444     3344567


Q ss_pred             CEEEEEEEEeee
Q 019996          175 SVLSIKWTLRGK  186 (332)
Q Consensus       175 dti~irWtLsg~  186 (332)
                      +.+.+..+....
T Consensus        80 d~a~~~~~~~~~   91 (121)
T d3b7ca1          80 YAAMVVGRWDLK   91 (121)
T ss_dssp             TEEEEEEEEEEE
T ss_pred             CEEEEEEEEEEc
Confidence            776666555543

>d3er7a1 d.17.4.24 (A:5-122) Uncharacterized protein Exig0174 {Exiguobacterium sibiricum 255-15 [TaxId: 262543]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Exig0174-like
domain: Uncharacterized protein Exig0174
species: Exiguobacterium sibiricum 255-15 [TaxId: 262543]

Probab=91.69  E-value=0.2  Score=40.27  Aligned_cols=79  Identities=14%  Similarity=0.272  Sum_probs=58.9

Q ss_pred             cccccccceEeeCCcccccchHHHHHHHHHhhhcCCCeE---EEEE-----ecCCEEEEEEEEeeeeCccccccCCce-E
Q 019996          129 ALGTFAVSVKYKDPTRSFTGREKYKRRLWATTALDNPSV---EMVM-----LSTSVLSIKWTLRGKPKSIIANIGGDL-I  199 (332)
Q Consensus       129 t~sIYApDV~FKDPFNsFrGrerYkri~~M~~~L~nPrf---em~m-----~s~dti~irWtLsg~lklPwA~~ggrl-~  199 (332)
                      +-.+|+.|+.+.=-=+...|++++..-+   +.++.-.-   .|..     ..+++..++|-+.|+.+      .|++ .
T Consensus        23 Li~LFSdd~~i~anG~~~~G~~ai~sFf---~~FF~~N~e~KHlwd~~~~~E~~dt~et~WaV~gk~~------dG~~~~   93 (118)
T d3er7a1          23 LISLFSDEITFVLNGQEQHGIDAWKQFV---RMVFTANQDIKHMYAGWVPSETGDTMETRWAVCGKSA------DGSVFT   93 (118)
T ss_dssp             HHHTEEEEEEEEETTEEEESHHHHHHHH---HHHHHHEEEEEEEECCCEECSSTTCEEEEEEEEEEET------TSCEEE
T ss_pred             HHHHhccCeEEEecCccccChHHHHHHH---HHHHhcchHHHHHhccceeccccCeeeeeeEEEeeec------CCcEEE
Confidence            4567888888874466788999999887   33332222   2222     35689999999999988      5665 5


Q ss_pred             EeeeeEEEEeCCCCcEEE
Q 019996          200 VKVYSKFTLNQISGQVIE  217 (332)
Q Consensus       200 I~G~Se~~LN~isGlVvs  217 (332)
                      ..|.-.-+||. +|+|+.
T Consensus        94 ~~G~DiA~l~~-~GKI~y  110 (118)
T d3er7a1          94 QDGTDIARLNA-DGKIVY  110 (118)
T ss_dssp             EEEEEEEEECT-TSCEEE
T ss_pred             ecCcchhhhcC-CCcEEe
Confidence            99999999999 999975

>d3b8la1 d.17.4.28 (A:1-144) Uncharacterized protein Saro3538 {Novosphingobium aromaticivorans [TaxId: 48935]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: BaiE/LinA-like
domain: Uncharacterized protein Saro3538
species: Novosphingobium aromaticivorans [TaxId: 48935]

Probab=90.58  E-value=2.3  Score=31.86  Aligned_cols=78  Identities=8%  Similarity=0.051  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHH-h-CC--ccccccccceEeeCC---cccccchHHHHHHH-HHhhhcCCCeE-----EEEEecCCEE
Q 019996          111 STARQLVRDILELR-E-GN--RALGTFAVSVKYKDP---TRSFTGREKYKRRL-WATTALDNPSV-----EMVMLSTSVL  177 (332)
Q Consensus       111 ~tirqL~~Di~~lr-e-gn--rt~sIYApDV~FKDP---FNsFrGrerYkri~-~M~~~L~nPrf-----em~m~s~dti  177 (332)
                      .-|++|...+..+. + ++  ...++|++|+.|.-|   .-.+.|++.++..+ .+.......+-     .+...+++.+
T Consensus         9 ~aI~~L~~~Y~~~~D~~~d~d~~~~lFt~D~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~H~~~n~~i~~~~~~~A   88 (144)
T d3b8la1           9 LAIQDLMIAYAHAVDTVSDIDAVLDVFTEDAVFDLSGIGLTPQVGHAGIREFFTNVFANMSHHAHYLTNFAVTGYEGDTA   88 (144)
T ss_dssp             HHHHHHHHHHHHHHHTTSCHHHHHTTEEEEEEEECGGGTCCCEEHHHHHHHHHHHHHHHEEEEEEEEEEEEEEEECSSEE
T ss_pred             HHHHHHHHHHHHHHCcCCCHHHHHhhccCCEEEEecCccCcccccHHHHHHHHHHHhccCccEEEEeecccceecCCCEE
Confidence            44888999988886 3 44  467999999999643   34788999998887 44444322211     2234688999


Q ss_pred             EEEEEEeeeeC
Q 019996          178 SIKWTLRGKPK  188 (332)
Q Consensus       178 ~irWtLsg~lk  188 (332)
                      ..+|.+.....
T Consensus        89 ~~~~~~~~~~~   99 (144)
T d3b8la1          89 SMRAYVIGMGV   99 (144)
T ss_dssp             EEEEEEEEEEE
T ss_pred             EEEEEEEEEEE
Confidence            99999876433

>d3cnxa1 d.17.4.17 (A:5-157) Uncharacterized protein SAV4671 {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SAV4671-like
domain: Uncharacterized protein SAV4671
species: Streptomyces avermitilis [TaxId: 33903]

Probab=90.45  E-value=1.7  Score=33.34  Aligned_cols=110  Identities=8%  Similarity=0.010  Sum_probs=70.8

Q ss_pred             hHHHHHHHHHHHHHHHHhCC--ccccccccceEeeCC------------------cccccchHHHHHHH-HHhhhcCCCe
Q 019996          108 LVESTARQLVRDILELREGN--RALGTFAVSVKYKDP------------------TRSFTGREKYKRRL-WATTALDNPS  166 (332)
Q Consensus       108 ~VE~tirqL~~Di~~lregn--rt~sIYApDV~FKDP------------------FNsFrGrerYkri~-~M~~~L~nPr  166 (332)
                      .+|++...+.+=..++.+||  ....+|++|..+.+.                  -..++|++.++..+ .++.......
T Consensus         5 d~~~v~aa~~af~~A~~~~D~~a~~~~w~~d~~~~~~~~~~~~~~~d~v~~~hpg~~~l~G~~ai~~~~~~~~~~~~~~~   84 (153)
T d3cnxa1           5 DVEQVGLANTAFYEAMERGDFETLSSLWLTPADLGVDEEYHDPADAGVVSCVHPGWPVLSGRGEVLRSYALIMANTEYIQ   84 (153)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHHHBCCHHHHTC------CCCTTCCEEECTTCCEEEHHHHHHHHHHHHHHTCSEEE
T ss_pred             cHHHHHHHHHHHHHHHHcCCHHHHHHhhcccccccccccccccccccceeeecCCCccccCHHHHHHHHHHHhcccCccc
Confidence            57777777777777788888  488999998876553                  24689999999998 6677666666


Q ss_pred             EEEE----EecCCEEEE--EEEEeeeeC---ccccccCCceEEeeeeEEEEeCCCC--cEEEE
Q 019996          167 VEMV----MLSTSVLSI--KWTLRGKPK---SIIANIGGDLIVKVYSKFTLNQISG--QVIEH  218 (332)
Q Consensus       167 fem~----m~s~dti~i--rWtLsg~lk---lPwA~~ggrl~I~G~Se~~LN~isG--lVvsH  218 (332)
                      ++..    ...++.+.+  .|++.....   .+- ..+..+...+..+..|=.++|  +|+.|
T Consensus        85 ~~~~~~~v~v~gD~A~v~~~~~v~~~~~~~~~~~-~~g~~~~~~~r~T~v~~k~dg~Wkivh~  146 (153)
T d3cnxa1          85 FFLTDVHVSVTGDTALVTCTENILSGGPPPDDSD-ELGPLVGQLVVATNVFRRTPDGWKLWSH  146 (153)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEEEEEEC----------CCCEEEEEEEEEEEECCTTCCEEEEE
T ss_pred             ceEEEeEEEEeCcEEEEEEEEEEEeecccccccc-cCCcccceeEEEEEEEEEECCEEEEEEE
Confidence            5332    246666554  566654322   111 113335577777777777666  66655

>d3ef8a1 d.17.4.28 (A:1-149) Uncharacterized protein Saro1465 {Novosphingobium aromaticivorans [TaxId: 48935]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: BaiE/LinA-like
domain: Uncharacterized protein Saro1465
species: Novosphingobium aromaticivorans [TaxId: 48935]

Probab=89.32  E-value=0.89  Score=34.31  Aligned_cols=79  Identities=15%  Similarity=0.141  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHhC---CccccccccceEeeC-CcccccchHHHHHHH-HHhhhcCCCeE-----EEEEecCCEEEE
Q 019996          110 ESTARQLVRDILELREG---NRALGTFAVSVKYKD-PTRSFTGREKYKRRL-WATTALDNPSV-----EMVMLSTSVLSI  179 (332)
Q Consensus       110 E~tirqL~~Di~~lreg---nrt~sIYApDV~FKD-PFNsFrGrerYkri~-~M~~~L~nPrf-----em~m~s~dti~i  179 (332)
                      .+.|++|...+..+...   +.+.++|++|+.|.. |...++|++.++..+ ..........-     .+...+++.+..
T Consensus         9 ~~aI~~l~~~Y~~~~D~~d~~~~~~lFt~Da~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~h~~~~~~v~~~~~~~a~~   88 (149)
T d3ef8a1           9 MRAIERMMFDYSYHLDMNHPEELAALFVEDCEVSYAPNFGATGRDAYKKTLEGIGTFFRGTSHHNSNICIDFVSETEANV   88 (149)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEETTEEEESHHHHHHHTTTHHHHEEEEEEEEEEEEEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHhhCCCceEEEEecCcccccHHHHHHHHHHHhccCCeEEEEecCceEEecCCceeEE
Confidence            35688888888888544   368999999999984 788999999998887 33322211110     111235678888


Q ss_pred             EEEEeeeeC
Q 019996          180 KWTLRGKPK  188 (332)
Q Consensus       180 rWtLsg~lk  188 (332)
                      +|.+.....
T Consensus        89 ~~~~~~~~~   97 (149)
T d3ef8a1          89 RSVVLAIHR   97 (149)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEEEE
Confidence            988776433

>d2chca1 d.17.4.25 (A:1-167) Uncharacterized protein Rv3472 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Rv3472-like
domain: Uncharacterized protein Rv3472
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.50  E-value=4.5  Score=31.81  Aligned_cols=77  Identities=9%  Similarity=0.015  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHH---hCCccccccccceEeeCCcccccchHHHHHHH-HHhhhcCCCeE---EEEEecCCEEEEEEEEe
Q 019996          112 TARQLVRDILELR---EGNRALGTFAVSVKYKDPTRSFTGREKYKRRL-WATTALDNPSV---EMVMLSTSVLSIKWTLR  184 (332)
Q Consensus       112 tirqL~~Di~~lr---egnrt~sIYApDV~FKDPFNsFrGrerYkri~-~M~~~L~nPrf---em~m~s~dti~irWtLs  184 (332)
                      -|++|..++..+.   ..+...++|++|+.|.-|.-.++|++.++..+ .+......-.+   .+...+++++..+|.+.
T Consensus        13 eI~~Li~~Ya~aiD~~d~d~~~~lFteDa~~~~~~~~~~g~~~I~~~~~~~~~~~~~~H~~~n~~i~i~gd~A~~~~~~~   92 (167)
T d2chca1          13 RIQALCARYCLTINTQDGEGWAGCFTEDGAFEFDGWVIRGRPALREYADAHARVVRGRHLTTDLLYEVDGDVATGRSASV   92 (167)
T ss_dssp             HHHHHHHHHHHHHTTTCHHHHHTTEEEEEEEEETTEEEESHHHHHHHHHHHHHHCCCCEEEEEEEEEEETTEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHhCCCHHHHHHhccCCeEEEeCCcccccHHHHHHHHHHhccccceEEEccccEEEecCCEEEEEEEEE
Confidence            4788888888873   33468899999999999999999999999876 32222211111   22235789999999987


Q ss_pred             eeeC
Q 019996          185 GKPK  188 (332)
Q Consensus       185 g~lk  188 (332)
                      ....
T Consensus        93 ~~~~   96 (167)
T d2chca1          93 VTLA   96 (167)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7654

>d2ux0a1 d.17.4.7 (A:387-521) Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A
domain: Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.00  E-value=6.6  Score=27.67  Aligned_cols=50  Identities=10%  Similarity=0.135  Sum_probs=38.2

Q ss_pred             hhHHHHHHHHHHHHHHH-HhCC--ccccccccceEeeCCc---ccccchHHHHHHH
Q 019996          107 PLVESTARQLVRDILEL-REGN--RALGTFAVSVKYKDPT---RSFTGREKYKRRL  156 (332)
Q Consensus       107 p~VE~tirqL~~Di~~l-regn--rt~sIYApDV~FKDPF---NsFrGrerYkri~  156 (332)
                      ++.|+-|++|.+.+.+. .+||  ...++|++|+.|-+|.   ....|.+.++...
T Consensus         7 ~~~~~eI~~l~~~~~~A~~~~D~~~~~~~~~~d~~~~~~~~~~~~~~g~~~~~~~~   62 (135)
T d2ux0a1           7 KVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYF   62 (135)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCEEEHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHcCCHHHHHHhCcCCCcEEEeccCCceechHHHHHHHH
Confidence            56788888888888876 5666  4889999999998774   3446777777776

>d2rfra1 d.17.4.28 (A:1-153) Uncharacterized protein Saro3722 {Novosphingobium aromaticivorans [TaxId: 48935]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: BaiE/LinA-like
domain: Uncharacterized protein Saro3722
species: Novosphingobium aromaticivorans [TaxId: 48935]

Probab=80.17  E-value=3.9  Score=30.54  Aligned_cols=76  Identities=12%  Similarity=0.067  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHHHHH-hCC--ccccccccceEeeCCc-ccccchHHHHHHH--HHhh---------hcCCCeEEEEEecC
Q 019996          110 ESTARQLVRDILELR-EGN--RALGTFAVSVKYKDPT-RSFTGREKYKRRL--WATT---------ALDNPSVEMVMLST  174 (332)
Q Consensus       110 E~tirqL~~Di~~lr-egn--rt~sIYApDV~FKDPF-NsFrGrerYkri~--~M~~---------~L~nPrfem~m~s~  174 (332)
                      ++-|++|...+.++. +++  ...++|++|+.|.-|. ..+.|.+..+.++  ++..         .+.++.++   .++
T Consensus        17 ~~aI~~l~~~y~~~~D~~d~~~~~~lFt~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~i~~~~i~---~~~   93 (153)
T d2rfra1          17 REEIRELIARYGPLADSGDAEALSELWVEDGEYAVVGFATAKGRAAIAALIDGQTHRALMADGCAHFLGPATVT---VEG   93 (153)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTSCCEESHHHHHHHHHSHHHHHHHHHCEEEEECCCEEE---EET
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHHHhhccCCEEEEeeccccccccchHHHHHHHHHhhccCCCcEEEEeCCEEEE---EcC
Confidence            456777777777763 333  5789999999997764 4677777777765  2221         23344443   356


Q ss_pred             CEEEEEEEEeeeeC
Q 019996          175 SVLSIKWTLRGKPK  188 (332)
Q Consensus       175 dti~irWtLsg~lk  188 (332)
                      +.+..+|.+.....
T Consensus        94 d~a~~~~~~~~~~~  107 (153)
T d2rfra1          94 DTATARCHSVVFRC  107 (153)
T ss_dssp             TEEEEEEEEEEEEE
T ss_pred             CeEEEEEEEEEEEE
Confidence            77888888876544