Citrus Sinensis ID: 020076

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
MPFSITHNAHVLLQPVRNTSPLVCSHTNCFNKKEQTQNWNGLKFIRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVILNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQLQESTSARRKQREYLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFRVGGAMVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQYFHPQ
ccEEEEccccEEEccccccccccccccccccHHHHHHcccccccEEccccccccccccccccccEEEEcccHHHHHHHHHHHHHccccEEEEEccEEEEEEcccccEEEEEEccccEEEEEccEEEEcccccHHHHHHHHHHcccccccccccccccHHHHHHHcccccccccccEEEEEEEEcccccEEEEEccccccccccccccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHccccccccccEEEccccccEEEEcccccHHHHHHHHHHHHHHHHHHHcccccccEEEEccc
ccEEEEccccEEcccccccccccccccccHHHHHHHHHHcccccEEccccHHcccEEEcccccEEEEccccHHHHHHHHHHHHHccccEEEEEcccEEEEEcccccEEEEEEcEEEEEcccEEEEEEEcccEHHHHHHHHHHccEEccHHHcccccEHHHHHHHccEEccEEHHHHEEEEEEEcccccEEEEEccccccEccEcHHHHcccEEEEEEEEcEEccHHHHHHHHHHHHHHHHHHccccccEEcccEcccccccccHHHHHHHccccccEEccEEEcccccccEEEcccccHHHHHHHHHHHHHHHHHHHcccccEccEEEccc
MPFSITHNAHVllqpvrntsplvcshtncfnkkeqtqnwnglKFIRRNKLLkdlstwgiggpcnyfVQVFDQSQLVSAIRYCHEHSVRYVVIgkgsnclfddlgfdgcVILNRIEFlerketgiyrvgsgfrfnslgmqcctegftglefaagipgtvggavymnagangqetagvidsvdIVTLggklqrvsrndlkfgyrsssfqDMKDLAAIVAVTFQLQESTSARRKQREYLDRrrmtqplgertagsvfrnpsdKEVAAAELIERAGlkgfrvggaMVSNIHANFFvntggstsRDMLNLIAFVKEKVDQKFGVQLKEEVQYFHPQ
MPFSITHNAHVLLQPVRNTSPLVCSHTNcfnkkeqtqnwnglkFIRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVILNRIeflerketgiYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTLggklqrvsrndLKFGYRSSSFQDMKDLAAIVAVtfqlqestsarrkqreyldrrrmtqplgertagsvfrnpsDKEVAAAELIERAGLKGFRVGGAMVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEevqyfhpq
MPFSITHNAHVLLQPVRNTSPLVCSHTNCFNKKEQTQNWNGLKFIRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVILNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQLQESTSARRKQREYLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFRVGGAMVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQYFHPQ
******HNAHVLLQPVRNTSPLVCSHTNCFNKKEQTQNWNGLKFIRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVILNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQL****************************************AAAELIERAGLKGFRVGGAMVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQY****
**F****NAHVLLQPVRN***LVCSHTNCFNKKEQTQNWNGLKFIRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVILNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQLQESTSARRKQREYLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFRVGGAMVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQYFHP*
MPFSITHNAHVLLQPVRNTSPLVCSHTNCFNKKEQTQNWNGLKFIRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVILNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQLQ***********YLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFRVGGAMVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQYFHPQ
MPFSITHNAHVLLQPVRNTSPLVCSHTNCFNKKEQTQNWNGLKFIRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVILNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQLQESTSARRKQREYLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFRVGGAMVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQYFHP*
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPFSITHNAHVLLQPVRNTSPLVCSHTNCFNKKEQTQNWNGLKFIRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVILNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQLQESTSARRKQREYLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFRVGGAMVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQYFHPQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query331 2.2.26 [Sep-21-2011]
Q6MAQ1299 UDP-N-acetylenolpyruvoylg yes no 0.839 0.929 0.496 2e-74
Q5L5A3296 UDP-N-acetylenolpyruvoylg yes no 0.836 0.935 0.432 4e-61
Q822B0296 UDP-N-acetylenolpyruvoylg yes no 0.836 0.935 0.407 3e-59
Q255M5296 UDP-N-acetylenolpyruvoylg yes no 0.827 0.925 0.417 6e-58
Q9Z6S1304 UDP-N-acetylenolpyruvoylg yes no 0.827 0.901 0.407 5e-56
Q9PL89296 UDP-N-acetylenolpyruvoylg yes no 0.839 0.939 0.408 2e-53
B0BAT9291 UDP-N-acetylenolpyruvoylg yes no 0.818 0.931 0.431 8e-53
B0B960291 UDP-N-acetylenolpyruvoylg yes no 0.818 0.931 0.431 8e-53
Q3KKK8291 UDP-N-acetylenolpyruvoylg yes no 0.818 0.931 0.431 8e-53
P0CD77291 UDP-N-acetylenolpyruvoylg yes no 0.818 0.931 0.431 2e-52
>sp|Q6MAQ1|MURB_PARUW UDP-N-acetylenolpyruvoylglucosamine reductase OS=Protochlamydia amoebophila (strain UWE25) GN=murB PE=3 SV=1 Back     alignment and function desciption
 Score =  280 bits (715), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 140/282 (49%), Positives = 198/282 (70%), Gaps = 4/282 (1%)

Query: 46  RRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGF 105
           + N LLK+++T+GIGGP  YFV+V     +   + +C+++ + Y ++GKGSN LFDD GF
Sbjct: 14  QTNCLLKEITTFGIGGPAKYFVEVRTIPDMQKTLLFCYQNEIPYFILGKGSNSLFDDRGF 73

Query: 106 DGCVILNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMN 165
           +G VI NRI+ LE+ E G + VG+G+ F+ LG Q   +G+ GLEFA+GIPG+VGGA++MN
Sbjct: 74  NGLVIANRIDCLEKNEKGCWHVGAGYSFSLLGSQTARQGWEGLEFASGIPGSVGGAIFMN 133

Query: 166 AGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQLQES 225
           AGANG+ETA  + SVD V   GKL    R++L F YR+S FQ++K   AIV+ TFQL  S
Sbjct: 134 AGANGRETADNLISVDFVDEQGKLIHFKRSNLNFQYRTSPFQNIK--GAIVSATFQLNAS 191

Query: 226 TSARRKQREYLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFRVGGAMVSN 285
             AR+KQ   +D R+ TQP   ++AG VFRNP+     A  LIE+AGLK  ++GGA VS+
Sbjct: 192 QEARQKQLSIIDYRKKTQPYKAKSAGCVFRNPNCGHAGA--LIEQAGLKETKIGGAAVSS 249

Query: 286 IHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQY 327
           +HANF +N+G +TS+D+L LI  ++E V  K G +L+ E++Y
Sbjct: 250 VHANFIINSGLATSQDVLALIRLIQETVKAKTGAELESEIRY 291
Cell wall formation.
Protochlamydia amoebophila (strain UWE25) (taxid: 264201)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 5EC: 8
>sp|Q5L5A3|MURB_CHLAB UDP-N-acetylenolpyruvoylglucosamine reductase OS=Chlamydophila abortus (strain S26/3) GN=murB PE=3 SV=1 Back     alignment and function description
>sp|Q822B0|MURB_CHLCV UDP-N-acetylenolpyruvoylglucosamine reductase OS=Chlamydophila caviae (strain GPIC) GN=murB PE=3 SV=1 Back     alignment and function description
>sp|Q255M5|MURB_CHLFF UDP-N-acetylenolpyruvoylglucosamine reductase OS=Chlamydophila felis (strain Fe/C-56) GN=murB PE=3 SV=1 Back     alignment and function description
>sp|Q9Z6S1|MURB_CHLPN UDP-N-acetylenolpyruvoylglucosamine reductase OS=Chlamydia pneumoniae GN=murB PE=3 SV=2 Back     alignment and function description
>sp|Q9PL89|MURB_CHLMU UDP-N-acetylenolpyruvoylglucosamine reductase OS=Chlamydia muridarum (strain MoPn / Nigg) GN=murB PE=3 SV=1 Back     alignment and function description
>sp|B0BAT9|MURB_CHLTB UDP-N-acetylenolpyruvoylglucosamine reductase OS=Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis) GN=murB PE=3 SV=1 Back     alignment and function description
>sp|B0B960|MURB_CHLT2 UDP-N-acetylenolpyruvoylglucosamine reductase OS=Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) GN=murB PE=3 SV=1 Back     alignment and function description
>sp|Q3KKK8|MURB_CHLTA UDP-N-acetylenolpyruvoylglucosamine reductase OS=Chlamydia trachomatis serovar A (strain HAR-13 / ATCC VR-571B) GN=murB PE=3 SV=1 Back     alignment and function description
>sp|P0CD77|MURB_CHLTR UDP-N-acetylenolpyruvoylglucosamine reductase OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=murB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query331
225452045344 PREDICTED: UDP-N-acetylenolpyruvoylgluco 0.942 0.906 0.680 1e-127
296087273373 unnamed protein product [Vitis vinifera] 0.945 0.839 0.678 1e-126
147810590 677 hypothetical protein VITISV_017399 [Viti 0.758 0.370 0.729 1e-105
168029085382 predicted protein [Physcomitrella patens 0.864 0.748 0.570 1e-89
76880168382 MurB reductase [Physcomitrella patens su 0.864 0.748 0.567 7e-89
302814208332 hypothetical protein SELMODRAFT_128879 [ 0.851 0.849 0.542 5e-85
302762368332 hypothetical protein SELMODRAFT_81558 [S 0.851 0.849 0.542 2e-84
282891351293 hypothetical protein pah_c050o152 [Parac 0.839 0.948 0.496 8e-73
46447258299 UDP-N-acetylenolpyruvoylglucosamine redu 0.839 0.929 0.496 1e-72
297621029295 UDP-N-acetylenolpyruvoylglucosamine redu 0.827 0.928 0.464 4e-65
>gi|225452045|ref|XP_002280375.1| PREDICTED: UDP-N-acetylenolpyruvoylglucosamine reductase [Vitis vinifera] Back     alignment and taxonomy information
 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/322 (68%), Positives = 260/322 (80%), Gaps = 10/322 (3%)

Query: 10  HVLLQPVRNTSPLVCSHTNCFNKKEQTQNWNGLKFIRRNKLLKDLSTWGIGGPCNYFVQV 69
           H+LL   R   P + +H            W GL+ IR  KLLKDLSTWGIGGPC++F+QV
Sbjct: 30  HLLLSSPRKAWPSLSNHIK----------WEGLRVIRGKKLLKDLSTWGIGGPCDHFLQV 79

Query: 70  FDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVILNRIEFLERKETGIYRVGS 129
           F  SQL+SA+RYC EHS+ ++++GKGSNCLFDDLG+DGCVI NRIEFLER E GIYR GS
Sbjct: 80  FTHSQLLSALRYCREHSIPFIIVGKGSNCLFDDLGYDGCVIQNRIEFLERNEPGIYRAGS 139

Query: 130 GFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTLGGKL 189
           GF FN LG+Q  +EG+TGLEFA GIPGTVGGAVYMNAGANGQETAGV+  V+ VT  G+ 
Sbjct: 140 GFPFNRLGVQSSSEGYTGLEFAGGIPGTVGGAVYMNAGANGQETAGVVHGVEFVTTEGRF 199

Query: 190 QRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQLQESTSARRKQREYLDRRRMTQPLGERT 249
           Q ++R DLKFGYR S FQ+MK+LAAIVAVTFQL+ S SARR Q++YL+RRR++QP+GE++
Sbjct: 200 QSLNRTDLKFGYRLSPFQNMKNLAAIVAVTFQLKHSASARRMQQQYLERRRLSQPVGEQS 259

Query: 250 AGSVFRNPSDKEVAAAELIERAGLKGFRVGGAMVSNIHANFFVNTGGSTSRDMLNLIAFV 309
           AGSVFRNPS+  V A ELIERAGLKG++VGGAMVSNIHANFF+N+G STS+DML LI  V
Sbjct: 260 AGSVFRNPSNLGVTAGELIERAGLKGYKVGGAMVSNIHANFFINSGQSTSQDMLELIRLV 319

Query: 310 KEKVDQKFGVQLKEEVQYFHPQ 331
           KEKV Q+FGVQLKEEV Y HP 
Sbjct: 320 KEKVYQRFGVQLKEEVLYVHPH 341

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296087273|emb|CBI33647.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147810590|emb|CAN71966.1| hypothetical protein VITISV_017399 [Vitis vinifera] Back     alignment and taxonomy information
>gi|168029085|ref|XP_001767057.1| predicted protein [Physcomitrella patens subsp. patens] gi|162681799|gb|EDQ68223.1| predicted protein [Physcomitrella patens subsp. patens] Back     alignment and taxonomy information
>gi|76880168|dbj|BAE45857.1| MurB reductase [Physcomitrella patens subsp. patens] Back     alignment and taxonomy information
>gi|302814208|ref|XP_002988788.1| hypothetical protein SELMODRAFT_128879 [Selaginella moellendorffii] gi|300143359|gb|EFJ10050.1| hypothetical protein SELMODRAFT_128879 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|302762368|ref|XP_002964606.1| hypothetical protein SELMODRAFT_81558 [Selaginella moellendorffii] gi|300168335|gb|EFJ34939.1| hypothetical protein SELMODRAFT_81558 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|282891351|ref|ZP_06299853.1| hypothetical protein pah_c050o152 [Parachlamydia acanthamoebae str. Hall's coccus] gi|338175016|ref|YP_004651826.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Parachlamydia acanthamoebae UV-7] gi|281498848|gb|EFB41165.1| hypothetical protein pah_c050o152 [Parachlamydia acanthamoebae str. Hall's coccus] gi|336479374|emb|CCB85972.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Parachlamydia acanthamoebae UV-7] Back     alignment and taxonomy information
>gi|46447258|ref|YP_008623.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Candidatus Protochlamydia amoebophila UWE25] gi|81626603|sp|Q6MAQ1.1|MURB_PARUW RecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; AltName: Full=UDP-N-acetylmuramate dehydrogenase gi|46400899|emb|CAF24348.1| putative UDP-N-acetylmuramate dehydrogenase [Candidatus Protochlamydia amoebophila UWE25] Back     alignment and taxonomy information
>gi|297621029|ref|YP_003709166.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Waddlia chondrophila WSU 86-1044] gi|297376330|gb|ADI38160.1| putative UDP-N-acetylenolpyruvoylglucosamine reductase [Waddlia chondrophila WSU 86-1044] gi|337293156|emb|CCB91147.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Waddlia chondrophila 2032/99] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query331
TIGR_CMR|BA_4048301 BA_4048 "UDP-N-acetylenolpyruv 0.800 0.880 0.376 3e-46
TIGR_CMR|CHY_2067302 CHY_2067 "UDP-N-acetylenolpyru 0.839 0.920 0.378 3.2e-42
TIGR_CMR|GSU_3067288 GSU_3067 "UDP-N-acetylenolpyru 0.785 0.902 0.407 6.1e-39
TIGR_CMR|BA_5315305 BA_5315 "UDP-N-acetylenolpyruv 0.836 0.908 0.336 1.3e-38
TIGR_CMR|CBU_0137316 CBU_0137 "UDP-N-acetylenolpyru 0.625 0.655 0.363 5.5e-32
UNIPROTKB|P08373342 murB [Escherichia coli K-12 (t 0.519 0.502 0.357 9e-31
TIGR_CMR|SPO_1200308 SPO_1200 "UDP-N-acetylenolpyru 0.827 0.889 0.333 1.1e-30
TIGR_CMR|APH_0745302 APH_0745 "UDP-N-acetylenolpyru 0.797 0.874 0.306 1.2e-26
UNIPROTKB|Q9KV40347 murB "UDP-N-acetylenolpyruvoyl 0.498 0.475 0.337 2.4e-24
TIGR_CMR|VC_0318347 VC_0318 "UDP-N-acetylenolpyruv 0.498 0.475 0.337 2.4e-24
TIGR_CMR|BA_4048 BA_4048 "UDP-N-acetylenolpyruvoylglucosamine reductase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 105/279 (37%), Positives = 168/279 (60%)

Query:    55 STWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVI-LNR 113
             +T  IGGP +  +     + +   ++   ++  ++ VIG+GSN L  DLG +G VI L  
Sbjct:    26 TTMKIGGPADILIVPKRVAGIEKTLQLVKKYKTKWTVIGRGSNLLVSDLGIEGVVIRLGE 85

Query:   114 -IEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQE 172
              ++ LE ++  + RVG G+    L      +G  GLEFA+GIPG+VGGAVYMNAGA+  +
Sbjct:    86 GLDHLEVEKHRV-RVGGGYPLIKLSTLLSRQGLAGLEFASGIPGSVGGAVYMNAGAHKSD 144

Query:   173 TAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQLQ-----ESTS 227
              + ++    I+   G +  ++  +++F YR+S  Q  +    ++   FQLQ        S
Sbjct:   145 ISNILSKALILFEDGTIDWLTHGEMEFSYRTSVLQTKRP-GIVLEAEFQLQIGERERIVS 203

Query:   228 ARRKQREYLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFRVGGAMVSNIH 287
               +K ++Y   RR TQP     AGSVFRNP+     A +LIE+AGL+G+++GGA +S +H
Sbjct:   204 VMQKNKDY---RRETQPWNHPCAGSVFRNPTP--YFAGDLIEKAGLRGYQIGGAQISEMH 258

Query:   288 ANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQ 326
              NF +NTGG++++D+L+LIA +K+ +  KFGV++  EV+
Sbjct:   259 GNFIINTGGASAQDVLSLIALIKQTIKDKFGVEMHTEVE 297
GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=ISS
GO:0009252 "peptidoglycan biosynthetic process" evidence=ISS
TIGR_CMR|CHY_2067 CHY_2067 "UDP-N-acetylenolpyruvoylglucosamine reductase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_3067 GSU_3067 "UDP-N-acetylenolpyruvoylglucosamine reductase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|BA_5315 BA_5315 "UDP-N-acetylenolpyruvoylglucosamine reductase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0137 CBU_0137 "UDP-N-acetylenolpyruvoylglucosamine reductase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|P08373 murB [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_1200 SPO_1200 "UDP-N-acetylenolpyruvoylglucosamine reductase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|APH_0745 APH_0745 "UDP-N-acetylenolpyruvoylglucosamine reductase" [Anaplasma phagocytophilum HZ (taxid:212042)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KV40 murB "UDP-N-acetylenolpyruvoylglucosamine reductase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0318 VC_0318 "UDP-N-acetylenolpyruvoylglucosamine reductase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B0B960MURB_CHLT21, ., 1, ., 1, ., 1, 5, 80.43110.81870.9312yesno
A5D143MURB_PELTS1, ., 1, ., 1, ., 1, 5, 80.36570.80060.8466yesno
Q7V9C4MURB_PROMM1, ., 1, ., 1, ., 1, 5, 80.3750.85190.9185yesno
Q67Q47MURB2_SYMTH1, ., 1, ., 1, ., 1, 5, 80.39640.85190.9155yesno
B0CCD5MURB_ACAM11, ., 1, ., 1, ., 1, 5, 80.36840.82170.8831yesno
B9MN03MURB_CALBD1, ., 1, ., 1, ., 1, 5, 80.35730.85800.9044yesno
Q3ANM5MURB_SYNSC1, ., 1, ., 1, ., 1, 5, 80.36970.82770.9133yesno
P18579MURB_BACSU1, ., 1, ., 1, ., 1, 5, 80.35190.83080.9075yesno
A5GHN8MURB_SYNPW1, ., 1, ., 1, ., 1, 5, 80.37760.82770.8838yesno
Q5L5A3MURB_CHLAB1, ., 1, ., 1, ., 1, 5, 80.43260.83680.9358yesno
A7Z4E6MURB_BACA21, ., 1, ., 1, ., 1, 5, 80.35660.81570.8910yesno
Q3MAP7MURB_ANAVT1, ., 1, ., 1, ., 1, 5, 80.35640.84590.8459yesno
B0BAT9MURB_CHLTB1, ., 1, ., 1, ., 1, 5, 80.43110.81870.9312yesno
A4XIM9MURB_CALS81, ., 1, ., 1, ., 1, 5, 80.37060.83380.8903yesno
B2GAN2MURB_LACF31, ., 1, ., 1, ., 1, 5, 80.37890.83680.9233yesno
B7GGI1MURB_ANOFW1, ., 1, ., 1, ., 1, 5, 80.37320.82170.9006yesno
Q3KKK8MURB_CHLTA1, ., 1, ., 1, ., 1, 5, 80.43110.81870.9312yesno
Q65JX9MURB_BACLD1, ., 1, ., 1, ., 1, 5, 80.36200.83980.9174yesno
Q81WD1MURB1_BACAN1, ., 1, ., 1, ., 1, 5, 80.37060.80360.8837yesno
Q255M5MURB_CHLFF1, ., 1, ., 1, ., 1, 5, 80.41750.82770.9256yesno
Q97LP4MURB_CLOAB1, ., 1, ., 1, ., 1, 5, 80.38770.83080.9016yesno
B0TGC2MURB_HELMI1, ., 1, ., 1, ., 1, 5, 80.39270.82470.8694yesno
A2C5M2MURB_PROM31, ., 1, ., 1, ., 1, 5, 80.38090.84590.9120yesno
Q7VEJ2MURB_PROMA1, ., 1, ., 1, ., 1, 5, 80.36860.84890.9557yesno
C1L2X6MURB_LISMC1, ., 1, ., 1, ., 1, 5, 80.35780.83680.9295yesno
Q8YM74MURB_NOSS11, ., 1, ., 1, ., 1, 5, 80.35050.83980.8398yesno
Q822B0MURB_CHLCV1, ., 1, ., 1, ., 1, 5, 80.40780.83680.9358yesno
Q636B7MURB1_BACCZ1, ., 1, ., 1, ., 1, 5, 80.37800.81260.8936yesno
Q732F9MURB1_BACC11, ., 1, ., 1, ., 1, 5, 80.37060.80360.8837yesno
Q9Z6S1MURB_CHLPN1, ., 1, ., 1, ., 1, 5, 80.40700.82770.9013yesno
P0CD77MURB_CHLTR1, ., 1, ., 1, ., 1, 5, 80.43110.81870.9312yesno
Q92BT5MURB_LISIN1, ., 1, ., 1, ., 1, 5, 80.35330.84290.9362yesno
Q46I41MURB_PROMT1, ., 1, ., 1, ., 1, 5, 80.38460.83980.9553yesno
Q8DLV6MURB_THEEB1, ., 1, ., 1, ., 1, 5, 80.36930.83980.9235yesno
Q8Y776MURB_LISMO1, ., 1, ., 1, ., 1, 5, 80.35780.83680.9295yesno
Q6HEQ5MURB1_BACHK1, ., 1, ., 1, ., 1, 5, 80.37060.80360.8837yesno
A9KSS3MURB_CLOPH1, ., 1, ., 1, ., 1, 5, 80.40410.82770.8838yesno
Q7UA72MURB_SYNPX1, ., 1, ., 1, ., 1, 5, 80.36200.84590.9364yesno
Q9PL89MURB_CHLMU1, ., 1, ., 1, ., 1, 5, 80.40890.83980.9391yesno
Q88YF4MURB_LACPL1, ., 1, ., 1, ., 1, 5, 80.36140.83680.9172yesno
Q9K9T1MURB_BACHD1, ., 1, ., 1, ., 1, 5, 80.37410.84890.9335yesno
Q819Q4MURB1_BACCR1, ., 1, ., 1, ., 1, 5, 80.3750.82770.9102yesno
B8DE89MURB_LISMH1, ., 1, ., 1, ., 1, 5, 80.35780.83680.9295yesno
Q71ZQ0MURB_LISMF1, ., 1, ., 1, ., 1, 5, 80.35780.83680.9295yesno
A8FCY2MURB_BACP21, ., 1, ., 1, ., 1, 5, 80.34360.83680.9141yesno
Q3AAE8MURB_CARHZ1, ., 1, ., 1, ., 1, 5, 80.37630.84590.9271yesno
Q6MAQ1MURB_PARUW1, ., 1, ., 1, ., 1, 5, 80.49640.83980.9297yesno
A0PYB4MURB_CLONN1, ., 1, ., 1, ., 1, 5, 80.36800.82770.8925yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.1.1.1580.914
3rd Layer1.1.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00038228001
SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (344 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00037717001
SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (527 aa)
••• ••• 0.997
GSVIVG00027807001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (471 aa)
• •  •• 0.986
GSVIVG00025526001
SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (402 aa)
• •   • 0.973
GSVIVG00000431001
SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (510 aa)
• •   • 0.972
GSVIVG00003447001
SubName- Full=Chromosome undetermined scaffold_143, whole genome shotgun sequence; (374 aa)
• •   • 0.967
GSVIVG00017740001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (320 aa)
• •   • 0.964
GSVIVG00003087001
SubName- Full=Chromosome undetermined scaffold_139, whole genome shotgun sequence; (510 aa)
• •   • 0.964
GSVIVG00032399001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (228 aa)
•     • 0.956
GSVIVG00027244001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (424 aa)
•     • 0.942
GSVIVG00021622001
SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (423 aa)
•     • 0.932

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
PRK13905298 PRK13905, murB, UDP-N-acetylenolpyruvoylglucosamin 1e-115
COG0812291 COG0812, MurB, UDP-N-acetylmuramate dehydrogenase 1e-100
TIGR00179284 TIGR00179, murB, UDP-N-acetylenolpyruvoylglucosami 2e-67
PRK14649295 PRK14649, PRK14649, UDP-N-acetylenolpyruvoylglucos 9e-61
PRK14653297 PRK14653, PRK14653, UDP-N-acetylenolpyruvoylglucos 2e-59
PRK00046334 PRK00046, murB, UDP-N-acetylenolpyruvoylglucosamin 3e-53
PRK14652302 PRK14652, PRK14652, UDP-N-acetylenolpyruvoylglucos 1e-50
PRK12436305 PRK12436, PRK12436, UDP-N-acetylenolpyruvoylglucos 2e-50
PRK14651273 PRK14651, PRK14651, UDP-N-acetylenolpyruvoylglucos 4e-48
PRK13906307 PRK13906, murB, UDP-N-acetylenolpyruvoylglucosamin 1e-45
PRK13904257 PRK13904, murB, UDP-N-acetylenolpyruvoylglucosamin 2e-40
PRK13903363 PRK13903, murB, UDP-N-acetylenolpyruvoylglucosamin 6e-36
PRK14650302 PRK14650, PRK14650, UDP-N-acetylenolpyruvoylglucos 5e-32
pfam02873103 pfam02873, MurB_C, UDP-N-acetylenolpyruvoylglucosa 1e-31
PRK14648354 PRK14648, PRK14648, UDP-N-acetylenolpyruvoylglucos 2e-23
pfam01565139 pfam01565, FAD_binding_4, FAD binding domain 2e-21
COG0277 459 COG0277, GlcD, FAD/FMN-containing dehydrogenases [ 2e-04
>gnl|CDD|237553 PRK13905, murB, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information 
 Score =  335 bits (862), Expect = e-115
 Identities = 122/289 (42%), Positives = 174/289 (60%), Gaps = 15/289 (5%)

Query: 45  IRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLG 104
           +  N+ L   +++ +GGP +Y V+  D   L   ++   E+++   V+G GSN L  D G
Sbjct: 13  LLENEPLARYTSFRVGGPADYLVEPADIEDLQEFLKLLKENNIPVTVLGNGSNLLVRDGG 72

Query: 105 FDGCVI-----LNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVG 159
             G VI     LN IE     E      G+G     L       G +GLEFAAGIPGTVG
Sbjct: 73  IRGVVIRLGKGLNEIEV----EGNRITAGAGAPLIKLARFAAEAGLSGLEFAAGIPGTVG 128

Query: 160 GAVYMNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVT 219
           GAV+MNAGA G ETA V++SV+++   G+++ +S  +L FGYR S+ Q+   +  +++ T
Sbjct: 129 GAVFMNAGAYGGETADVLESVEVLDRDGEIKTLSNEELGFGYRHSALQEEGLI--VLSAT 186

Query: 220 FQLQESTSA--RRKQREYLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFR 277
           FQL+       + +  E L RR  TQPL   +AGSVF+NP      A +LIE AGLKG+R
Sbjct: 187 FQLEPGDKEEIKARMDELLARREATQPLEYPSAGSVFKNPPGH--FAGKLIEEAGLKGYR 244

Query: 278 VGGAMVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQ 326
           +GGA VS  HANF +NTGG+T+ D+ +LI  V++ V +KFGV+L+ EV+
Sbjct: 245 IGGAQVSEKHANFIINTGGATAADIEDLIEHVQKTVKEKFGVELEWEVR 293

Length = 298
>gnl|CDD|223882 COG0812, MurB, UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|232859 TIGR00179, murB, UDP-N-acetylenolpyruvoylglucosamine reductase Back     alignment and domain information
>gnl|CDD|173112 PRK14649, PRK14649, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>gnl|CDD|237778 PRK14653, PRK14653, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>gnl|CDD|234593 PRK00046, murB, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>gnl|CDD|237777 PRK14652, PRK14652, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>gnl|CDD|171497 PRK12436, PRK12436, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>gnl|CDD|237776 PRK14651, PRK14651, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>gnl|CDD|184386 PRK13906, murB, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>gnl|CDD|184384 PRK13904, murB, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>gnl|CDD|237552 PRK13903, murB, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>gnl|CDD|173113 PRK14650, PRK14650, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>gnl|CDD|111727 pfam02873, MurB_C, UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Back     alignment and domain information
>gnl|CDD|173111 PRK14648, PRK14648, UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>gnl|CDD|216574 pfam01565, FAD_binding_4, FAD binding domain Back     alignment and domain information
>gnl|CDD|223354 COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 331
PRK14650302 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 100.0
COG0812291 MurB UDP-N-acetylmuramate dehydrogenase [Cell enve 100.0
PRK14653297 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 100.0
PRK00046334 murB UDP-N-acetylenolpyruvoylglucosamine reductase 100.0
PRK14648354 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 100.0
PRK14649295 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 100.0
PRK13906307 murB UDP-N-acetylenolpyruvoylglucosamine reductase 100.0
PRK14652302 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 100.0
PRK13903363 murB UDP-N-acetylenolpyruvoylglucosamine reductase 100.0
PRK12436305 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 100.0
TIGR00179284 murB UDP-N-acetylenolpyruvoylglucosamine reductase 100.0
PRK14651273 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 100.0
PRK13905298 murB UDP-N-acetylenolpyruvoylglucosamine reductase 100.0
PRK13904257 murB UDP-N-acetylenolpyruvoylglucosamine reductase 100.0
PF02873105 MurB_C: UDP-N-acetylenolpyruvoylglucosamine reduct 100.0
TIGR00387 413 glcD glycolate oxidase, subunit GlcD. This protein 99.91
PRK11230 499 glycolate oxidase subunit GlcD; Provisional 99.91
TIGR01678 438 FAD_lactone_ox sugar 1,4-lactone oxidases. This mo 99.9
PF01565139 FAD_binding_4: FAD binding domain This is only a s 99.89
PLN02465 573 L-galactono-1,4-lactone dehydrogenase 99.89
PLN02805 555 D-lactate dehydrogenase [cytochrome] 99.88
COG0277 459 GlcD FAD/FMN-containing dehydrogenases [Energy pro 99.87
TIGR01676 541 GLDHase galactonolactone dehydrogenase. This model 99.86
TIGR01679 419 bact_FAD_ox FAD-linked oxidoreductase. This model 99.86
TIGR01677 557 pln_FAD_oxido plant-specific FAD-dependent oxidore 99.84
PLN02441 525 cytokinin dehydrogenase 99.84
PRK11282352 glcE glycolate oxidase FAD binding subunit; Provis 99.81
PRK11183 564 D-lactate dehydrogenase; Provisional 99.79
KOG1231 505 consensus Proteins containing the FAD binding doma 99.78
KOG1232 511 consensus Proteins containing the FAD binding doma 99.66
KOG4730 518 consensus D-arabinono-1, 4-lactone oxidase [Defens 99.66
KOG1233 613 consensus Alkyl-dihydroxyacetonephosphate synthase 99.56
PF00941171 FAD_binding_5: FAD binding domain in molybdopterin 97.87
KOG1262 543 consensus FAD-binding protein DIMINUTO [General fu 97.68
PRK09971291 xanthine dehydrogenase subunit XdhB; Provisional 97.23
TIGR02963467 xanthine_xdhA xanthine dehydrogenase, small subuni 97.22
TIGR03195321 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta s 96.62
PRK09799258 putative oxidoreductase; Provisional 96.58
PLN02906 1319 xanthine dehydrogenase 96.45
TIGR03312257 Se_sel_red_FAD probable selenate reductase, FAD-bi 95.91
TIGR02969 1330 mam_aldehyde_ox aldehyde oxidase. Members of this 95.77
TIGR03199264 pucC xanthine dehydrogenase C subunit. This gene h 95.26
COG1319284 CoxM Aerobic-type carbon monoxide dehydrogenase, m 94.08
COG4630493 XdhA Xanthine dehydrogenase, iron-sulfur cluster a 88.31
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.4e-88  Score=639.17  Aligned_cols=282  Identities=29%  Similarity=0.432  Sum_probs=266.5

Q ss_pred             ccCCCcccccccCCCccccEEEEeCCHHHHHHHHHHHHHCCCceEEeCCCcccccccCC-CCEEEEEc-CCCceEEcCCe
Q 020076           46 RRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLG-FDGCVILN-RIEFLERKETG  123 (331)
Q Consensus        46 ~~~~~L~~~tt~~iGG~a~~~v~P~s~eel~~iv~~a~~~~~pv~vlG~GSNll~~d~~-~~GvVI~~-~l~~i~~~~~~  123 (331)
                      -.++||++||||+|||+|+++++|+|++||.+++++++++++|++++|+|||+|++|.| ++|+||.+ +++.+++++ .
T Consensus        16 ~~~~~L~~~tt~~iGG~A~~~~~p~~~~eL~~~l~~~~~~~~p~~vlG~GSNlLv~D~g~~~g~vi~~~~~~~i~~~~-~   94 (302)
T PRK14650         16 PQTKNLANYTTYKIGGISKLFLTPKTIKDAEHIFKAAIEEKIKIFILGGGSNILINDEEEIDFPIIYTGHLNKIEIHD-N   94 (302)
T ss_pred             CCCccccccceeeeCcEEEEEEecCCHHHHHHHHHHHHHcCCCEEEEeceeEEEEECCCccceEEEEECCcCcEEEeC-C
Confidence            35689999999999999999999999999999999999999999999999999999999 99999987 677777654 4


Q ss_pred             EEEEcCCCcHHHHHHHHHHcCCCcccCCCCccccchHHHHhhhhccCccccceeeEEEEEeCCCcEEEEecCcccccccc
Q 020076          124 IYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRS  203 (331)
Q Consensus       124 ~v~v~AG~~l~~L~~~~~~~Gl~GlE~l~gIPgTVGGav~mNaGayG~ei~d~v~sv~vv~~~G~v~~~~~~el~~~YR~  203 (331)
                      .|+|+||+.|++|+++|.++||+||||++|||||||||++|||||||.||+|+|.+|+++|.+|++++++++||.|+||+
T Consensus        95 ~v~a~AG~~~~~l~~~~~~~gl~GlE~l~gIPGTVGGAv~mNAGayG~ei~d~l~sV~~~d~~g~~~~~~~~e~~f~YR~  174 (302)
T PRK14650         95 QIVAECGTNFEDLCKFALQNELSGLEFIYGLPGTLGGAIWMNARCFGNEISEILDKITFIDEKGKTICKKFKKEEFKYKI  174 (302)
T ss_pred             EEEEEeCCcHHHHHHHHHHcCCchhhhhcCCCcchhHHHHhhCCccccchheeEEEEEEEECCCCEEEEEHHHcCccccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCceEEEEEEEEeEeCChH--HHHHHHHHHHHhcCCCCCCCCeeeeccCCCCCCccHHHHHHHhCCCCeeECCE
Q 020076          204 SSFQDMKDLAAIVAVTFQLQESTSA--RRKQREYLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFRVGGA  281 (331)
Q Consensus       204 s~f~~~g~~gII~~a~lkL~~~~~~--~~~~~~~~~~r~~~qP~~~~saGS~FkNP~~~~~~Ag~LIe~~GlKG~~~Gga  281 (331)
                      |.|++.  .+||++|+|+|.+.++.  ++.|++.+++|+++||..+||||||||||++.+.+||||||+|||||+|+|+|
T Consensus       175 S~f~~~--~~iIl~a~f~L~~~~~~~i~~~~~~~~~~R~~kqP~~~psaGS~FKNP~~~~~~Ag~LIe~aGlKG~riG~A  252 (302)
T PRK14650        175 SPFQNK--NTFILKATLNLKKGNKKHIEEIMKQNKQIRINKGHYLFPSSGSTFKNNKAFLKPTGQIIEECKLKGLSIGGA  252 (302)
T ss_pred             ccCCCC--CEEEEEEEEEEcCCCHHHHHHHHHHHHHHHhcCCcCCCCCcccceECCCCCccchHHHHHHcCCCCCccCCE
Confidence            999853  37999999999998754  56788899999999999999999999999853349999999999999999999


Q ss_pred             EEeccCcceEEeCCCCCHHHHHHHHHHHHHHHHHHhCCeeecceEEecC
Q 020076          282 MVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQYFHP  330 (331)
Q Consensus       282 ~vS~~HanfivN~g~Ata~dv~~Li~~v~~~V~~~~gi~Le~Ev~~i~~  330 (331)
                      +||+||||||||.|+||++||++||++||++|+++|||+||+||+++|+
T Consensus       253 ~VS~kHanfIVN~G~Ata~Dil~Li~~v~~~V~~~~GI~Le~Ev~~iG~  301 (302)
T PRK14650        253 TVSHYHGNFIININNATSKDIKTLIEKVKTEVQIKTGFLLEEEVLYIGF  301 (302)
T ss_pred             EEccccccEEEECCCCCHHHHHHHHHHHHHHHHHHHCCeeeEeeEEEec
Confidence            9999999999999999999999999999999999999999999999984

>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase Back     alignment and domain information
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PF02873 MurB_C: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; InterPro: IPR011601 This entry represents a C-terminal conserved region of UDP-N-acetylenolpyruvoylglucosamine reductase 1 Back     alignment and domain information
>TIGR00387 glcD glycolate oxidase, subunit GlcD Back     alignment and domain information
>PRK11230 glycolate oxidase subunit GlcD; Provisional Back     alignment and domain information
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases Back     alignment and domain information
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage Back     alignment and domain information
>PLN02465 L-galactono-1,4-lactone dehydrogenase Back     alignment and domain information
>PLN02805 D-lactate dehydrogenase [cytochrome] Back     alignment and domain information
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information
>TIGR01676 GLDHase galactonolactone dehydrogenase Back     alignment and domain information
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase Back     alignment and domain information
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase Back     alignment and domain information
>PLN02441 cytokinin dehydrogenase Back     alignment and domain information
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional Back     alignment and domain information
>PRK11183 D-lactate dehydrogenase; Provisional Back     alignment and domain information
>KOG1231 consensus Proteins containing the FAD binding domain [Energy production and conversion] Back     alignment and domain information
>KOG1232 consensus Proteins containing the FAD binding domain [Energy production and conversion] Back     alignment and domain information
>KOG4730 consensus D-arabinono-1, 4-lactone oxidase [Defense mechanisms] Back     alignment and domain information
>KOG1233 consensus Alkyl-dihydroxyacetonephosphate synthase [General function prediction only] Back     alignment and domain information
>PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain Back     alignment and domain information
>KOG1262 consensus FAD-binding protein DIMINUTO [General function prediction only] Back     alignment and domain information
>PRK09971 xanthine dehydrogenase subunit XdhB; Provisional Back     alignment and domain information
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit Back     alignment and domain information
>TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit Back     alignment and domain information
>PRK09799 putative oxidoreductase; Provisional Back     alignment and domain information
>PLN02906 xanthine dehydrogenase Back     alignment and domain information
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit Back     alignment and domain information
>TIGR02969 mam_aldehyde_ox aldehyde oxidase Back     alignment and domain information
>TIGR03199 pucC xanthine dehydrogenase C subunit Back     alignment and domain information
>COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion] Back     alignment and domain information
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
3tx1_A322 X-Ray Crystal Structure Of Listeria Monocytogenes E 4e-45
1hsk_A326 Crystal Structure Of S. Aureus Murb Length = 326 5e-38
2q85_A342 Crystal Structure Of E. Coli Mur B Bound To A Napht 9e-29
2mbr_A340 Murb Wild Type, Complex With Enolpyruvyl-Udp-N- Ace 2e-28
1uxy_A340 Murb Mutant With Ser 229 Replaced By Ala, Complex W 3e-28
3i99_A357 The Crystal Structure Of The Udp-N-Acetylenolpyruvo 1e-25
2gqt_A268 Crystal Structure Of Udp-N-Acetylenolpyruvylglucosa 1e-23
>pdb|3TX1|A Chain A, X-Ray Crystal Structure Of Listeria Monocytogenes Egd-E Udp-N- Acetylenolpyruvylglucosamine Reductase (Murb) Length = 322 Back     alignment and structure 
Iteration: 1

 Score =  178 bits (451), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 102/285 (35%), Positives = 164/285 (57%), Gaps = 8/285 (2%)
Query: 45  IRRNKLLKDLSTWGIGGPCNYFV--QVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDD 102
           I+ N+ L   +    GG  + FV  +  +++Q V A  YCH++ +   ++G GSN +  D
Sbjct: 37  IKLNEPLSKYTYTKTGGAADVFVMPKTIEEAQEVVA--YCHQNKIPLTILGNGSNLIIKD 94
Query: 103 LGFDGCVI-LNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGA 161
            G  G ++ L+ ++ +ER  T I  + SG +          E  +GLEFA GIPG++GGA
Sbjct: 95  GGIRGVILHLDLLQTIERNNTQIVAM-SGAKLIDTAKFALNESLSGLEFACGIPGSIGGA 153
Query: 162 VYMNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQ 221
           ++MNAGA G E + V+++  ++T  G+L+++ R++LK  YR S+  +   +      +  
Sbjct: 154 LHMNAGAYGGEISDVLEAATVLTQTGELKKLKRSELKAAYRFSTIAEKNYIVLDATFSLA 213
Query: 222 LQESTSARRKQREYLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFRVGGA 281
           L+E    + K  E    R   QPL   + GSVF+ P      A +LI+ +GL+G  +GGA
Sbjct: 214 LEEKNLIQAKMDELTAAREAKQPLEYPSCGSVFKRPPGH--FAGKLIQDSGLQGHIIGGA 271
Query: 282 MVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQ 326
            VS  HA F VN GG+T+ D +NLIA+V++ V +KF V+L+ EV+
Sbjct: 272 QVSLKHAGFIVNIGGATATDYMNLIAYVQQTVREKFDVELETEVK 316
>pdb|1HSK|A Chain A, Crystal Structure Of S. Aureus Murb Length = 326 Back     alignment and structure
>pdb|2Q85|A Chain A, Crystal Structure Of E. Coli Mur B Bound To A Naphthyl Tetronic Acid Inihibitor Length = 342 Back     alignment and structure
>pdb|2MBR|A Chain A, Murb Wild Type, Complex With Enolpyruvyl-Udp-N- Acetylglucosamine Length = 340 Back     alignment and structure
>pdb|1UXY|A Chain A, Murb Mutant With Ser 229 Replaced By Ala, Complex With Enolpyruvyl-Udp-N-Acetylglucosamine Length = 340 Back     alignment and structure
>pdb|3I99|A Chain A, The Crystal Structure Of The Udp-N-Acetylenolpyruvoylglucosamine Reductase From The Vibrio Cholerae O1 Biovar Tor Length = 357 Back     alignment and structure
>pdb|2GQT|A Chain A, Crystal Structure Of Udp-N-Acetylenolpyruvylglucosamine Reductase (Murb) From Thermus Caldophilus Length = 268 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
3tx1_A322 UDP-N-acetylenolpyruvoylglucosamine reductase; str 1e-123
1hsk_A326 UDP-N-acetylenolpyruvoylglucosamine reductase; pep 1e-120
2gqt_A268 UDP-N-acetylenolpyruvylglucosamine reductase; pept 1e-104
3i99_A357 UDP-N-acetylenolpyruvoylglucosamine reductase; str 2e-96
1uxy_A340 MURB, uridine diphospho-N-acetylenolpyruvylglucosa 1e-95
2i0k_A 561 Oxidoreductase; MIX alpha beta, covalent FAD, flav 1e-05
3js8_A 540 Cholesterol oxidase; cholsterol, organic solvent s 6e-05
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes} Length = 322 Back     alignment and structure
 Score =  356 bits (916), Expect = e-123
 Identities = 100/286 (34%), Positives = 159/286 (55%), Gaps = 8/286 (2%)

Query: 45  IRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLG 104
           I+ N+ L   +    GG  + FV      +    + YCH++ +   ++G GSN +  D G
Sbjct: 37  IKLNEPLSKYTYTKTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGG 96

Query: 105 FDGCVI-LNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVY 163
             G ++ L+ ++ +ER  T I    SG +          E  +GLEFA GIPG++GGA++
Sbjct: 97  IRGVILHLDLLQTIERNNTQI-VAMSGAKLIDTAKFALNESLSGLEFACGIPGSIGGALH 155

Query: 164 MNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQLQ 223
           MNAGA G E + V+++  ++T  G+L+++ R++LK  YR S+  +   +  ++  TF L 
Sbjct: 156 MNAGAYGGEISDVLEAATVLTQTGELKKLKRSELKAAYRFSTIAEKNYI--VLDATFSLA 213

Query: 224 ESTSA--RRKQREYLDRRRMTQPLGERTAGSVFRNPSDKEVAAAELIERAGLKGFRVGGA 281
                  + K  E    R   QPL   + GSVF+ P      A +LI+ +GL+G  +GGA
Sbjct: 214 LEEKNLIQAKMDELTAAREAKQPLEYPSCGSVFKRPPGH--FAGKLIQDSGLQGHIIGGA 271

Query: 282 MVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVDQKFGVQLKEEVQY 327
            VS  HA F VN GG+T+ D +NLIA+V++ V +KF V+L+ EV+ 
Sbjct: 272 QVSLKHAGFIVNIGGATATDYMNLIAYVQQTVREKFDVELETEVKI 317
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1 Length = 326 Back     alignment and structure
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A* Length = 268 Back     alignment and structure
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae} Length = 357 Back     alignment and structure
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A* Length = 340 Back     alignment and structure
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A* Length = 561 Back     alignment and structure
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} Length = 540 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query331
3i99_A357 UDP-N-acetylenolpyruvoylglucosamine reductase; str 100.0
3tx1_A322 UDP-N-acetylenolpyruvoylglucosamine reductase; str 100.0
1uxy_A340 MURB, uridine diphospho-N-acetylenolpyruvylglucosa 100.0
2gqt_A268 UDP-N-acetylenolpyruvylglucosamine reductase; pept 100.0
1hsk_A326 UDP-N-acetylenolpyruvoylglucosamine reductase; pep 100.0
3pm9_A 476 Putative oxidoreductase; putative D-2-hydroxygluta 99.96
2bvf_A 459 6-hydroxy-D-nicotine oxidase; autoflavinylation, e 99.95
4feh_A 481 Oxidoreductase DPRE1; alpha+beta, decaprenylphosph 99.95
1zr6_A 503 Glucooligosaccharide oxidase; alpha + beta, flavoe 99.94
2uuu_A 584 Alkyldihydroxyacetonephosphate synthase; transfera 99.94
1w1o_A 534 Cytokinin dehydrogenase 1; flavin, oxidoreductase, 99.93
3vte_A 518 Tetrahydrocannabinolic acid synthase; BI-covalent 99.92
2ipi_A 521 Aclacinomycin oxidoreductase (aknox); anthracyclin 99.92
3rja_A 473 Carbohydrate oxidase; protein-substrate analogue c 99.92
3js8_A 540 Cholesterol oxidase; cholsterol, organic solvent s 99.92
1wvf_A 520 4-cresol dehydrogenase [hydroxylating] flavoprote 99.92
1e8g_A 560 Vanillyl-alcohol oxidase; oxidoreductase, flavoenz 99.91
2exr_A 524 Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin 99.91
2y3s_A 530 TAML; oxidoreductase; HET: FAD TIR; 1.67A {Strepto 99.91
3fw9_A 495 Reticuline oxidase; BI-covalent flavinylation, N-g 99.91
2vfr_A 422 Xylitol oxidase, alditol oxidase; FAD, sugar, poly 99.91
2wdx_A 523 Putative hexose oxidase; oxidoreductase-antibiotic 99.91
3pop_A 501 GILR oxidase; FAD binding protein, gilvocarcin, gi 99.9
4bby_A 658 Alkyldihydroxyacetonephosphate synthase, peroxiso; 99.89
2i0k_A 561 Oxidoreductase; MIX alpha beta, covalent FAD, flav 99.88
1f0x_A 571 DLDH, D-lactate dehydrogenase; oxidoreductase; HET 99.88
3tsh_A 500 Pollen allergen PHL P 4; flavoprotein, BI-covalent 99.85
2yvs_A219 Glycolate oxidase subunit GLCE; oxidoreductase; 2. 99.64
1ffv_C287 CUTM, flavoprotein of carbon monoxide dehydrogenas 99.62
2w3s_A462 Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2 99.43
1n62_C288 Carbon monoxide dehydrogenase medium chain; CODH, 99.03
3nvz_B305 Xanthine dehydrogenase/oxidase; hydroxylase, homod 98.95
1t3q_C288 Quinoline 2-oxidoreductase medium subunit; QOR, mo 98.38
3hrd_C296 Nicotinate dehydrogenase FAD-subunit; selenium lig 97.77
1rm6_B324 4-hydroxybenzoyl-COA reductase beta subunit; xanth 97.47
3unc_A 1332 Xanthine dehydrogenase/oxidase; oxidoreductase; HE 97.37
3zyv_A 1335 AOH1; oxidoreductase, molybdenum cofactor; HET: MT 95.71
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae} Back     alignment and structure
Probab=100.00  E-value=3.2e-84  Score=628.55  Aligned_cols=288  Identities=32%  Similarity=0.458  Sum_probs=263.9

Q ss_pred             cccccccCCCcccccccCCCccccEEEEeCCHHHHHHHHHHHHHCCCceEEeCCCcccccccCCCCEEEEEcCCCceEEc
Q 020076           41 GLKFIRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVILNRIEFLERK  120 (331)
Q Consensus        41 ~~~~~~~~~~L~~~tt~~iGG~a~~~v~P~s~eel~~iv~~a~~~~~pv~vlG~GSNll~~d~~~~GvVI~~~l~~i~~~  120 (331)
                      +++.++.|+||++||||++||+|+++++|+|++||++++++|+++++|++++|+|||++++|. ++|+||+++++.++++
T Consensus         9 ~~~~~~~~~~L~~~tt~~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~GvVI~l~~~~i~v~   87 (357)
T 3i99_A            9 TTMQIQLGANLKPYHTFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YTGMIVVNRLNGIEHQ   87 (357)
T ss_dssp             CCSCCEEEEESGGGSTTCCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EEEEEEEECCCCEEEE
T ss_pred             ccceeecCCcchhhccCCCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CCeEEEEcCCCceEEe
Confidence            345788999999999999999999999999999999999999999999999999999999997 9999999888888764


Q ss_pred             C---CeEEEEcCCCcHHHHHHHHHHcCCCcccCCCCccccchHHHHhhhhccCccccceeeEEEEEeC-CCcEEEEecCc
Q 020076          121 E---TGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTL-GGKLQRVSRND  196 (331)
Q Consensus       121 ~---~~~v~v~AG~~l~~L~~~~~~~Gl~GlE~l~gIPgTVGGav~mNaGayG~ei~d~v~sv~vv~~-~G~v~~~~~~e  196 (331)
                      +   +.+++|+||+.|.+|++++.++||+|+||+++||||||||++||||+||.+++|+|.+|+++|+ +|++++++++|
T Consensus        88 ~~~~~~~v~v~AG~~~~~l~~~a~~~Gl~GlE~l~gIPGtVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~~~d  167 (357)
T 3i99_A           88 QDDDYHRLHVAGGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLTMEE  167 (357)
T ss_dssp             ECSSEEEEEEETTSBHHHHHHHHHHTTCTTCGGGTTCCSBGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEETGG
T ss_pred             ccCCceEEEEeCCCcHHHHHHHHHHcCCcCccccCCCCchhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEeHHH
Confidence            2   3589999999999999999999999999999999999999999999999999999999999998 89999999999


Q ss_pred             cccccccccccC-CCCceEEEEEEEEeEeCChH----------------HHHHHHHH--HHHhcCCCCCCCCeeeeccCC
Q 020076          197 LKFGYRSSSFQD-MKDLAAIVAVTFQLQESTSA----------------RRKQREYL--DRRRMTQPLGERTAGSVFRNP  257 (331)
Q Consensus       197 l~~~YR~s~f~~-~g~~gII~~a~lkL~~~~~~----------------~~~~~~~~--~~r~~~qP~~~~saGS~FkNP  257 (331)
                      |+|+||+|.|++ +++++|||+++|+|.|.++.                ++.++...  |+++.+||.+.||||||||||
T Consensus       168 l~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~~~~~y~~l~~~l~~~~~~~~~~~v~~~R~~k~p~P~~~~saGS~FkNP  247 (357)
T 3i99_A          168 CQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQPIIQYGPLKDLSSDCAIHDVYQRVCATRMEKLPDPAVMGNAGSFFKNP  247 (357)
T ss_dssp             GCCBTTBCGGGTTTTTTEEEEEEEEEEESSCCCCCCSGGGGGSCTTCCHHHHHHHHHHHHHHHSCCTTTSCEEEESBCCC
T ss_pred             cCcccccccCCCccCCCEEEEEEEEEEEeCCccccchHHHHhhhccCCHHHHHHHHHHHHhcCCCCCCCCCccceeeeCC
Confidence            999999999975 36789999999999987521                23444443  445556899999999999999


Q ss_pred             CC-----------------------CCccHHHHHHHhCCCCeeECCEEEeccCcceEEeCCCCCHHHHHHHHHHHHHHHH
Q 020076          258 SD-----------------------KEVAAAELIERAGLKGFRVGGAMVSNIHANFFVNTGGSTSRDMLNLIAFVKEKVD  314 (331)
Q Consensus       258 ~~-----------------------~~~~Ag~LIe~~GlKG~~~Gga~vS~~HanfivN~g~Ata~dv~~Li~~v~~~V~  314 (331)
                      ..                       .|.+||||||+|||||+|+|+|+||+||||||||+|+||++||++||++||++|+
T Consensus       248 ~~~~~~~~~l~~~~~~~p~y~~~~g~k~~Ag~LIe~aGlKG~~~G~A~vs~kha~flvN~g~Ata~Di~~L~~~v~~~V~  327 (357)
T 3i99_A          248 VISQQAFARLQIEHPDVVAYPAEQGVKVAAGWLIDQAGLKGHQIGGAKVHPKQALVIVNTGDASAQDVLMLAADIQQRVF  327 (357)
T ss_dssp             EECHHHHHHHHHHCTTCCEECCSSSEEECHHHHHHHTTCTTCEETTEEECTTSTTEEEECSSCCHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHhhhcCCCCcccccCCceeeHHHHHHHcCCCCCeeCCEEEcccCCCEEEECCCCCHHHHHHHHHHHHHHHH
Confidence            62                       2458999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCeeecceEEec
Q 020076          315 QKFGVQLKEEVQYFH  329 (331)
Q Consensus       315 ~~~gi~Le~Ev~~i~  329 (331)
                      ++|||+||+||++||
T Consensus       328 ~~fgv~Le~Ev~~ig  342 (357)
T 3i99_A          328 NCYGIELEHEVRFIG  342 (357)
T ss_dssp             HHHSCCCCBCSEEEC
T ss_pred             HHHCceeeEeeEEEC
Confidence            999999999999998
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes} Back     alignment and structure
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A* Back     alignment and structure
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A* Back     alignment and structure
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1 Back     alignment and structure
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Back     alignment and structure
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A* Back     alignment and structure
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A Back     alignment and structure
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A* Back     alignment and structure
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Back     alignment and structure
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A* Back     alignment and structure
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa} Back     alignment and structure
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus} Back     alignment and structure
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A* Back     alignment and structure
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} Back     alignment and structure
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* Back     alignment and structure
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A* Back     alignment and structure
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* Back     alignment and structure
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A* Back     alignment and structure
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A* Back     alignment and structure
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* Back     alignment and structure
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A* Back     alignment and structure
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A* Back     alignment and structure
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A* Back     alignment and structure
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A* Back     alignment and structure
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1 Back     alignment and structure
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A* Back     alignment and structure
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus} Back     alignment and structure
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C* Back     alignment and structure
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A* Back     alignment and structure
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C* Back     alignment and structure
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B* Back     alignment and structure
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3 Back     alignment and structure
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Back     alignment and structure
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B* Back     alignment and structure
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A* Back     alignment and structure
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 331
d1hska1194 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetyleno 3e-29
d1hska2109 d.146.1.1 (A:209-317) Uridine diphospho-N-Acetylen 5e-27
d1uxya1198 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenol 1e-26
d1uxya2142 d.146.1.1 (A:201-342) Uridine diphospho-N-Acetylen 2e-20
d2i0ka2216 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibac 7e-04
>d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 194 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
domain: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
species: Staphylococcus aureus [TaxId: 1280]

 Score =  108 bits (271), Expect = 3e-29
 Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 2/179 (1%)

Query: 45  IRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLG 104
           I+ ++ LK  +    GG  ++++      ++ + ++Y +++ +    +G GSN +  + G
Sbjct: 17  IKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGG 76

Query: 105 FDGCVILNRIEFLERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYM 164
             G VI                 GSG     +         TGLEFA GIPG++GGAVYM
Sbjct: 77  IRGIVISLLSLDHIEVSDDAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYM 136

Query: 165 NAGANGQETAGVIDSVDIVTLGGKLQRVSRNDLKFGYRSSSFQDMKDLAAIVAVTFQLQ 223
           NAGA G E    ID    V   G L +++  +L+  YR+S  Q  K+   ++   F L 
Sbjct: 137 NAGAYGGEVKDCIDYALCVNEQGSLIKLTTKELELDYRNSIIQ--KEHLVVLEAAFTLA 193
>d1hska2 d.146.1.1 (A:209-317) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 109 Back     information, alignment and structure
>d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]} Length = 198 Back     information, alignment and structure
>d1uxya2 d.146.1.1 (A:201-342) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 142 Back     information, alignment and structure
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} Length = 216 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query331
d1hska1194 Uridine diphospho-N-Acetylenolpyruvylglucosamine r 100.0
d1uxya1198 Uridine diphospho-N-Acetylenolpyruvylglucosamine r 100.0
d1hska2109 Uridine diphospho-N-Acetylenolpyruvylglucosamine r 100.0
d1uxya2142 Uridine diphospho-N-Acetylenolpyruvylglucosamine r 100.0
d1w1oa2206 Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId 99.92
d1wvfa2236 Flavoprotein subunit of p-cresol methylhydroxylase 99.92
d1e8ga2268 Vanillyl-alcohol oxidase {Fungus (Penicillium simp 99.89
d2i0ka2216 Cholesterol oxidase {Brevibacterium sterolicum [Ta 99.88
d1f0xa2265 D-lactate dehydrogenase {Escherichia coli [TaxId: 99.69
d1n62c2177 Carbon monoxide (CO) dehydrogenase flavoprotein, N 97.95
d1rm6b2216 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, 97.95
d1v97a6223 Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [ 97.91
d1ffvc2177 Carbon monoxide (CO) dehydrogenase flavoprotein, N 97.89
d1jroa4167 Xanthine dehydrogenase chain A, domain 3 {Rhodobac 97.59
d1t3qc2176 Quinoline 2-oxidoreductase medium subunit QorM {Ps 97.58
>d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: FAD-binding/transporter-associated domain-like
superfamily: FAD-binding/transporter-associated domain-like
family: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
domain: Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=1.3e-48  Score=347.65  Aligned_cols=183  Identities=28%  Similarity=0.479  Sum_probs=170.4

Q ss_pred             hhcccccccCCCcccccccCCCccccEEEEeCCHHHHHHHHHHHHHCCCceEEeCCCcccccccCCCCEEEEEc-CCCce
Q 020076           39 WNGLKFIRRNKLLKDLSTWGIGGPCNYFVQVFDQSQLVSAIRYCHEHSVRYVVIGKGSNCLFDDLGFDGCVILN-RIEFL  117 (331)
Q Consensus        39 ~~~~~~~~~~~~L~~~tt~~iGG~a~~~v~P~s~eel~~iv~~a~~~~~pv~vlG~GSNll~~d~~~~GvVI~~-~l~~i  117 (331)
                      +-+-..++.|+||++|||||+||+|+++++|+|++||++++++|+++++|++++|+|||++++|.+++|+||++ +++.+
T Consensus        11 ~l~~~~i~~~~~L~~~tt~~vGG~a~~~v~p~s~~el~~~~~~a~~~~ip~~v~G~GSNll~~d~~~~g~vi~l~~~~~~   90 (194)
T d1hska1          11 LIPNEKIKVDEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLSLDHI   90 (194)
T ss_dssp             HSCGGGEEEEEEGGGTCTTSCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEEEEEEECTTCCCE
T ss_pred             hcCcccEEeCCcchhccEeeeCeEEEEEEecCCHHHHHHHHHHhhhcccceEEeccccccccCCCCceeEEEEeeccccc
Confidence            33344678899999999999999999999999999999999999999999999999999999999999999998 56666


Q ss_pred             EEcCCeEEEEcCCCcHHHHHHHHHHcCCCcccCCCCccccchHHHHhhhhccCccccceeeEEEEEeCCCcEEEEecCcc
Q 020076          118 ERKETGIYRVGSGFRFNSLGMQCCTEGFTGLEFAAGIPGTVGGAVYMNAGANGQETAGVIDSVDIVTLGGKLQRVSRNDL  197 (331)
Q Consensus       118 ~~~~~~~v~v~AG~~l~~L~~~~~~~Gl~GlE~l~gIPgTVGGav~mNaGayG~ei~d~v~sv~vv~~~G~v~~~~~~el  197 (331)
                      ++++ ..++|+||+.|.++.+++.++||+|+|++++||||||||++||||+||.+++|+|.+|++++++|++++++++||
T Consensus        91 ~~~~-~~v~~~aG~~~~~l~~~~~~~gl~g~e~~~gipgtvGGai~mNaG~yG~ei~d~v~~v~~v~~~G~i~~l~~~e~  169 (194)
T d1hska1          91 EVSD-DAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTTKEL  169 (194)
T ss_dssp             EEET-TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEETTEEHHHHEEEEEEECTTSCEEEEETTTT
T ss_pred             cccC-CeEEEEeccchHHHHHHHHhhccccccccCCcceeehhhhhccCcccCceEEEEEEEEEEEcCCCCEEEEEHHHc
Confidence            6544 579999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccCCCCceEEEEEEEEeEe
Q 020076          198 KFGYRSSSFQDMKDLAAIVAVTFQLQE  224 (331)
Q Consensus       198 ~~~YR~s~f~~~g~~gII~~a~lkL~~  224 (331)
                      .|+||+|.|+.+  .+||++|+|+|.|
T Consensus       170 ~f~YR~s~~~~~--~~iIl~a~f~L~P  194 (194)
T d1hska1         170 ELDYRNSIIQKE--HLVVLEAAFTLAP  194 (194)
T ss_dssp             TCBTTBCHHHHT--TCEEEEEEEECEE
T ss_pred             cccCCCCCCCCC--CEEEEEEEEEEEC
Confidence            999999999753  3799999999987
>d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hska2 d.146.1.1 (A:209-317) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1uxya2 d.146.1.1 (A:201-342) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Back     information, alignment and structure
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Back     information, alignment and structure
>d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]} Back     information, alignment and structure
>d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Back     information, alignment and structure
>d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
>d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure