Citrus Sinensis ID: 020090

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
MDNLLLILFLTAAASFFSTLILYLRSSSPSSSRSRRRSFTSQSHSHGLGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTV
ccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHccccEEEccccccEEEEEcHHHHHHHHHcccccEEccccHHHHHHcccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHcc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHcccEEEEEccccEEEEEcHHHHHHEEEcccccccccccHHHHHHccccHHEEccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccc
MDNLLLILFLTAAASFFSTLILYLrssspsssrsrrrsftsqshshglgqlplgtlgwpivgESLEFISCaltdrpesfmdkrrcmygkvfkshifgtptivstdaEVSKFVLqsdakafvpfypksLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENwmqdqpiyiqdesKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLmslpinipgsqlYRSLQAKKKMARLIQEIIQSkrdggmsninvPKDVIDVLMmnnasdqpltddliadnmidmmipgedsVPVLMTLAVKYLSDYPAALQQLTV
MDNLLLILFLTAAASFFSTLILYLRssspsssrsrRRSFTsqshshglgqlPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIiqskrdggmsniNVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTV
MDNLLLILFLTAAASFFSTLILYLrssspsssrsrrrsftsqshsHGLGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTV
***LLLILFLTAAASFFSTLILYL************************GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQS****GMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAA******
MDNLLLILFLTAAASFFSTLILYLRSSSPSSSRSRRR******************LGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEII****************VIDVLMMNNA**QPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTV
MDNLLLILFLTAAASFFSTLILYLR**********************LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTV
MDNLLLILFLTAAASFFSTLILYLRSSSPSSSRSRRRSFTSQSHSHGLGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMS**NVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTV
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ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDNLLLILFLTAAASFFSTLILYLRSSSPSSSRSRRRSFTSQSHSHGLGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query331 2.2.26 [Sep-21-2011]
Q94IA6 491 3-epi-6-deoxocathasterone yes no 0.909 0.613 0.614 1e-106
Q94IW5 490 Cytochrome P450 90D2 OS=O yes no 0.839 0.567 0.609 3e-96
Q9M066 524 3-epi-6-deoxocathasterone no no 0.839 0.530 0.480 4e-80
Q42569 472 Cytochrome P450 90A1 OS=A no no 0.827 0.580 0.354 8e-50
Q50EK6 481 Abietadienol/abietadienal N/A no 0.939 0.646 0.289 7e-45
Q9FMA5 465 Cytochrome P450 85A1 OS=A no no 0.815 0.580 0.318 2e-44
Q8GSQ1 469 Cytochrome P450 85A1 OS=O no no 0.815 0.575 0.318 5e-44
Q43147 464 Cytochrome P450 85A1 OS=S N/A no 0.815 0.581 0.321 5e-44
Q50EK5 487 Cytochrome P450 720B2 OS= N/A no 0.824 0.560 0.301 3e-41
Q50LE0 467 Cytochrome P450 85A3 OS=S N/A no 0.818 0.580 0.315 1e-40
>sp|Q94IA6|C90D1_ARATH 3-epi-6-deoxocathasterone 23-monooxygenase OS=Arabidopsis thaliana GN=CYP90D1 PE=2 SV=1 Back     alignment and function desciption
 Score =  384 bits (986), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/311 (61%), Positives = 242/311 (77%), Gaps = 10/311 (3%)

Query: 24  LRSSSPSSSRSRRRSFTSQSHSHGLGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKR 83
           LRSS  S  +      TSQSH     + P G+LGWP++GE++EF+S A +DRPESFMDKR
Sbjct: 27  LRSSPASKKKLNDHHVTSQSHG---PKFPHGSLGWPVIGETIEFVSSAYSDRPESFMDKR 83

Query: 84  RCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGG 143
           R MYG+VFKSHIFGT TIVSTDAEV++ VLQSD+ AFVPFYPK++ ELMGKSSILLING 
Sbjct: 84  RLMYGRVFKSHIFGTATIVSTDAEVNRAVLQSDSTAFVPFYPKTVRELMGKSSILLINGS 143

Query: 144 LQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKA 203
           L RR HGL+GSF KS  LKAQI RDM K++ +SM+ W +DQP+ +QD SK +AF+VL KA
Sbjct: 144 LHRRFHGLVGSFLKSPLLKAQIVRDMHKFLSESMDLWSEDQPVLLQDVSKTVAFKVLAKA 203

Query: 204 LINLDPGEQMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSK--- 260
           LI+++ GE +E LK++F+ FISGLMSLPIN PG+QL+RSLQAKK M + ++ II+ K   
Sbjct: 204 LISVEKGEDLEELKREFENFISGLMSLPINFPGTQLHRSLQAKKNMVKQVERIIEGKIRK 263

Query: 261 -RDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYL 319
            ++    ++ + KDV+DVL+ +  S + LT +LIA+NMIDMMIPG DSVPVL+TLAVK+L
Sbjct: 264 TKNKEEDDV-IAKDVVDVLLKD--SSEHLTHNLIANNMIDMMIPGHDSVPVLITLAVKFL 320

Query: 320 SDYPAALQQLT 330
           SD PAAL  LT
Sbjct: 321 SDSPAALNLLT 331
C-23 hydroxylase involved in brassinosteroids biosynthesis. Converts directly (22S,24R)-22-hydroxy-5-alpha-ergostan-3-one and 3-epi-6-deoxocathasterone to 3-dehydro-6-deoxoteasterone and 6-deoxotyphasterol. These C-23 hydroxylation shortcuts bypass campestanol, 6-deoxocathasterone, and 6-deoxoteasterone. Functionally redundant with CYP90C1.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: 2
>sp|Q94IW5|C90D2_ORYSJ Cytochrome P450 90D2 OS=Oryza sativa subsp. japonica GN=CYP90D2 PE=1 SV=1 Back     alignment and function description
>sp|Q9M066|C90C1_ARATH 3-epi-6-deoxocathasterone 23-monooxygenase OS=Arabidopsis thaliana GN=ROT3 PE=2 SV=3 Back     alignment and function description
>sp|Q42569|C90A1_ARATH Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1 Back     alignment and function description
>sp|Q50EK6|C72B1_PINTA Abietadienol/abietadienal oxidase OS=Pinus taeda GN=CYP720B1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FMA5|C85A1_ARATH Cytochrome P450 85A1 OS=Arabidopsis thaliana GN=CYP85A1 PE=2 SV=1 Back     alignment and function description
>sp|Q8GSQ1|C85A1_ORYSJ Cytochrome P450 85A1 OS=Oryza sativa subsp. japonica GN=CYP85A1 PE=1 SV=1 Back     alignment and function description
>sp|Q43147|C85A1_SOLLC Cytochrome P450 85A1 OS=Solanum lycopersicum GN=CYP85A1 PE=2 SV=1 Back     alignment and function description
>sp|Q50EK5|C72B2_PINTA Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 PE=2 SV=1 Back     alignment and function description
>sp|Q50LE0|C85A3_SOLLC Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CYP85A3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query331
255572967 482 cytochrome P450, putative [Ricinus commu 0.833 0.572 0.825 1e-130
224128516 456 cytochrome P450 probable 6-deoxoteastero 0.839 0.609 0.811 1e-130
224134987 459 cytochrome P450 probable 6-deoxoteastero 0.836 0.603 0.797 1e-126
356526027 474 PREDICTED: 3-epi-6-deoxocathasterone 23- 0.942 0.658 0.678 1e-122
307136277 676 cytochrome p450 [Cucumis melo subsp. mel 0.930 0.455 0.666 1e-122
359482509 478 PREDICTED: 3-epi-6-deoxocathasterone 23- 0.824 0.571 0.764 1e-122
297743073 475 unnamed protein product [Vitis vinifera] 0.918 0.64 0.7 1e-122
144905184 476 cytochrome P450 enzyme [Pisum sativum] 0.924 0.642 0.685 1e-121
356522526 473 PREDICTED: 3-epi-6-deoxocathasterone 23- 0.939 0.657 0.669 1e-120
356522528 450 PREDICTED: 3-epi-6-deoxocathasterone 23- 0.839 0.617 0.737 1e-119
>gi|255572967|ref|XP_002527414.1| cytochrome P450, putative [Ricinus communis] gi|223533224|gb|EEF34980.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 231/280 (82%), Positives = 255/280 (91%), Gaps = 4/280 (1%)

Query: 51  LPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSK 110
           LPLG LGWP +GE+LEF+SCA +DRPESFMDKRR MYGKVFKSHIFGTPTIVSTDAEVSK
Sbjct: 39  LPLGNLGWPFLGETLEFVSCAYSDRPESFMDKRRRMYGKVFKSHIFGTPTIVSTDAEVSK 98

Query: 111 FVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDME 170
           F+LQ DAK FVP YPKSLTELMGKSSILLING LQ+RIHGLIGSFFKS  LKAQITRDM+
Sbjct: 99  FILQGDAKMFVPSYPKSLTELMGKSSILLINGSLQKRIHGLIGSFFKSPHLKAQITRDMQ 158

Query: 171 KYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSL 230
            Y+ +SM+NW  DQPIYIQDE+KNIAFQVLVKALI+LDPG++ME LKKQFQEFI GLMSL
Sbjct: 159 VYVQESMKNWRCDQPIYIQDETKNIAFQVLVKALISLDPGQEMESLKKQFQEFICGLMSL 218

Query: 231 PINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTD 290
           P+NIPG+QLYRSLQAKKKM +L+Q IIQSKRDGG+S   VPKDV++VL +N+A+ Q LTD
Sbjct: 219 PVNIPGTQLYRSLQAKKKMVKLVQRIIQSKRDGGIS--TVPKDVVEVL-LNDANAQ-LTD 274

Query: 291 DLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLT 330
           DLIADNMIDMMIPGEDSVPVLMTLAVKYLSD PAALQQLT
Sbjct: 275 DLIADNMIDMMIPGEDSVPVLMTLAVKYLSDCPAALQQLT 314

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224128516|ref|XP_002329023.1| cytochrome P450 probable 6-deoxoteasterone to 3-dehydro 6-deoxoteasterone or teasterone to 3-dehydro teasterone [Populus trichocarpa] gi|222839694|gb|EEE78017.1| cytochrome P450 probable 6-deoxoteasterone to 3-dehydro 6-deoxoteasterone or teasterone to 3-dehydro teasterone [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224134987|ref|XP_002327539.1| cytochrome P450 probable 6-deoxoteasterone to 3-dehydro 6-deoxoteasterone or teasterone to 3-dehydro teasterone [Populus trichocarpa] gi|222836093|gb|EEE74514.1| cytochrome P450 probable 6-deoxoteasterone to 3-dehydro 6-deoxoteasterone or teasterone to 3-dehydro teasterone [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356526027|ref|XP_003531621.1| PREDICTED: 3-epi-6-deoxocathasterone 23-monooxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|307136277|gb|ADN34104.1| cytochrome p450 [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|359482509|ref|XP_002275659.2| PREDICTED: 3-epi-6-deoxocathasterone 23-monooxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297743073|emb|CBI35940.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|144905184|dbj|BAF56241.1| cytochrome P450 enzyme [Pisum sativum] Back     alignment and taxonomy information
>gi|356522526|ref|XP_003529897.1| PREDICTED: 3-epi-6-deoxocathasterone 23-monooxygenase-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|356522528|ref|XP_003529898.1| PREDICTED: 3-epi-6-deoxocathasterone 23-monooxygenase-like isoform 2 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query331
TAIR|locus:2091571 491 CYP90D1 ""cytochrome P450, fam 0.851 0.574 0.638 3.4e-93
TAIR|locus:2115220 524 ROT3 "ROTUNDIFOLIA 3" [Arabido 0.845 0.534 0.480 3.1e-74
TAIR|locus:2166439 472 CPD "CONSTITUTIVE PHOTOMORPHOG 0.827 0.580 0.354 2.5e-49
UNIPROTKB|Q8GSQ1 469 CYP85A1 "Cytochrome P450 85A1" 0.815 0.575 0.325 1.5e-42
TAIR|locus:2152292 465 BR6OX1 "brassinosteroid-6-oxid 0.812 0.578 0.335 1.5e-42
TAIR|locus:2101704 513 DWF4 "DWARF 4" [Arabidopsis th 0.637 0.411 0.316 3.2e-39
TAIR|locus:2098802 465 BR6OX2 "brassinosteroid-6-oxid 0.812 0.578 0.321 1.3e-38
UNIPROTKB|Q6F4F5 480 CYP724B1 "Cytochrome P450 724B 0.788 0.543 0.322 4.9e-37
UNIPROTKB|Q5CCK3 506 OsDWARF4 "Cytochrome P450" [Or 0.833 0.545 0.263 5.8e-34
UNIPROTKB|Q8H848 502 OJ1626B05.9 "Putative steroid 0.833 0.549 0.263 5.8e-34
TAIR|locus:2091571 CYP90D1 ""cytochrome P450, family 90, subfamily D, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
 Identities = 184/288 (63%), Positives = 231/288 (80%)

Query:    46 HGLGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTD 105
             HG  + P G+LGWP++GE++EF+S A +DRPESFMDKRR MYG+VFKSHIFGT TIVSTD
Sbjct:    47 HG-PKFPHGSLGWPVIGETIEFVSSAYSDRPESFMDKRRLMYGRVFKSHIFGTATIVSTD 105

Query:   106 AEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQI 165
             AEV++ VLQSD+ AFVPFYPK++ ELMGKSSILLING L RR HGL+GSF KS  LKAQI
Sbjct:   106 AEVNRAVLQSDSTAFVPFYPKTVRELMGKSSILLINGSLHRRFHGLVGSFLKSPLLKAQI 165

Query:   166 TRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFIS 225
              RDM K++ +SM+ W +DQP+ +QD SK +AF+VL KALI+++ GE +E LK++F+ FIS
Sbjct:   166 VRDMHKFLSESMDLWSEDQPVLLQDVSKTVAFKVLAKALISVEKGEDLEELKREFENFIS 225

Query:   226 GLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSK--RDGGMSNINV-PKDVIDVLMMNN 282
             GLMSLPIN PG+QL+RSLQAKK M + ++ II+ K  +       +V  KDV+DVL+ + 
Sbjct:   226 GLMSLPINFPGTQLHRSLQAKKNMVKQVERIIEGKIRKTKNKEEDDVIAKDVVDVLLKD- 284

Query:   283 ASDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLT 330
              S + LT +LIA+NMIDMMIPG DSVPVL+TLAVK+LSD PAAL  LT
Sbjct:   285 -SSEHLTHNLIANNMIDMMIPGHDSVPVLITLAVKFLSDSPAALNLLT 331
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0016132 "brassinosteroid biosynthetic process" evidence=IMP
GO:0016709 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen" evidence=IDA
GO:0048366 "leaf development" evidence=IGI
GO:0048441 "petal development" evidence=IGI
GO:0048443 "stamen development" evidence=IGI
TAIR|locus:2115220 ROT3 "ROTUNDIFOLIA 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166439 CPD "CONSTITUTIVE PHOTOMORPHOGENIC DWARF" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8GSQ1 CYP85A1 "Cytochrome P450 85A1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2152292 BR6OX1 "brassinosteroid-6-oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2101704 DWF4 "DWARF 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098802 BR6OX2 "brassinosteroid-6-oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6F4F5 CYP724B1 "Cytochrome P450 724B1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q5CCK3 OsDWARF4 "Cytochrome P450" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q8H848 OJ1626B05.9 "Putative steroid 22-alpha-hydroxylase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94IA6C90D1_ARATH1, ., 1, 4, ., 1, 3, ., 1, 1, 20.61410.90930.6130yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
PLN03141 452 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-m 1e-180
PLN02774 463 PLN02774, PLN02774, brassinosteroid-6-oxidase 2e-65
PLN02987 472 PLN02987, PLN02987, Cytochrome P450, family 90, su 7e-64
PLN02500 490 PLN02500, PLN02500, cytochrome P450 90B1 1e-44
PLN02196 463 PLN02196, PLN02196, abscisic acid 8'-hydroxylase 7e-41
PLN02302 490 PLN02302, PLN02302, ent-kaurenoic acid oxidase 3e-40
pfam00067 461 pfam00067, p450, Cytochrome P450 2e-12
COG2124 411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 2e-11
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 0.001
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information 
 Score =  504 bits (1300), Expect = e-180
 Identities = 203/286 (70%), Positives = 245/286 (85%), Gaps = 6/286 (2%)

Query: 49  GQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEV 108
            +LP G+LGWP++GE+L+FISCA + RPESFMDKRR +YGKVFKSHIFGTPTIVSTDAEV
Sbjct: 6   SRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEV 65

Query: 109 SKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRD 168
           +K VLQSD  AFVP YPKSLTELMGKSSILLING LQRR+HGLIG+F KS  LKAQITRD
Sbjct: 66  NKVVLQSDGNAFVPAYPKSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRD 125

Query: 169 MEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLM 228
           ME+Y+ +S+++W  D P+ +QDE+K IAF+VLVKALI+L+PGE+ME LKK+FQEFI GLM
Sbjct: 126 MERYVSESLDSWRDDPPVLVQDETKKIAFEVLVKALISLEPGEEMEFLKKEFQEFIKGLM 185

Query: 229 SLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMS----NINVPKDVIDVLMMNNAS 284
           SLPI +PG++LYRSLQAKK+M +L+++II+ KR    +       +PKDV+DVL + + S
Sbjct: 186 SLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVL-LRDGS 244

Query: 285 DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLT 330
           D+ LTDDLI+DNMIDMMIPGEDSVPVLMTLAVK+LSD P ALQQLT
Sbjct: 245 DE-LTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLT 289

Length = 452
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase Back     alignment and domain information
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1 Back     alignment and domain information
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase Back     alignment and domain information
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 331
PLN02500 490 cytochrome P450 90B1 100.0
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PLN02774 463 brassinosteroid-6-oxidase 100.0
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 100.0
PLN02196 463 abscisic acid 8'-hydroxylase 100.0
PLN02687 517 flavonoid 3'-monooxygenase 100.0
PLN02302 490 ent-kaurenoic acid oxidase 100.0
PLN02971 543 tryptophan N-hydroxylase 100.0
PLN02987 472 Cytochrome P450, family 90, subfamily A 100.0
PLN03234 499 cytochrome P450 83B1; Provisional 100.0
PLN02183 516 ferulate 5-hydroxylase 100.0
PLN02290 516 cytokinin trans-hydroxylase 100.0
PLN00168 519 Cytochrome P450; Provisional 100.0
PLN03112 514 cytochrome P450 family protein; Provisional 100.0
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN02966 502 cytochrome P450 83A1 100.0
PTZ00404 482 cytochrome P450; Provisional 100.0
PLN02394 503 trans-cinnamate 4-monooxygenase 100.0
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 100.0
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 100.0
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 100.0
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 100.0
PLN03018 534 homomethionine N-hydroxylase 100.0
PLN02655 466 ent-kaurene oxidase 100.0
PLN03195 516 fatty acid omega-hydroxylase; Provisional 100.0
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 100.0
PLN02936 489 epsilon-ring hydroxylase 100.0
PLN02738 633 carotene beta-ring hydroxylase 100.0
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 100.0
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.97
PLN02648 480 allene oxide synthase 99.97
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.97
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information 
Probab=100.00  E-value=5.9e-42  Score=304.13  Aligned_cols=280  Identities=28%  Similarity=0.607  Sum_probs=222.9

Q ss_pred             CCCCCCCCCCCchhhchHHHHhhhccCCchHHHHHHHHHcCCceEecccCCcEEEEcChHHHHHHHhcCcccccccchhh
Q 020090           48 LGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS  127 (331)
Q Consensus        48 ~~~~pp~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~  127 (331)
                      ..++||||+++|++||+..+........++.++.+++++||++|++++|++++|+++||+++++++.+++..|.++.+..
T Consensus        36 ~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~  115 (490)
T PLN02500         36 RFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRS  115 (490)
T ss_pred             CCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchH
Confidence            44789999999999998765432111357788999999999999999999999999999999999998876776554444


Q ss_pred             hhhhcCCccccccCchhHHHHHhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHHHHcCC
Q 020090          128 LTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINL  207 (331)
Q Consensus       128 ~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~  207 (331)
                      ....+|..+++..+|+.|+++|+++.+.|+..+++..+.+.+.+.+..+++.|.+++.+|+.+.+.+++++++++++||.
T Consensus       116 ~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fg~  195 (490)
T PLN02500        116 IGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKHIMSM  195 (490)
T ss_pred             HHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHHHhCC
Confidence            44456644778889999999999999999999887545788888888888888777789999999999999999999999


Q ss_pred             CchH-HHHHHHHHHHHHHHhhhccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCcccHHHHHhhccCC
Q 020090          208 DPGE-QMEILKKQFQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNI--NVPKDVIDVLMMNNAS  284 (331)
Q Consensus       208 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~--~~~~d~l~~ll~~~~~  284 (331)
                      +.++ +...+...+..+.......+..+|...+++..++++.+.+++.++++++++..+.+.  ..+.|+++.+++.   
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~---  272 (490)
T PLN02500        196 DPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKH---  272 (490)
T ss_pred             CCCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhc---
Confidence            8643 334444444444433322334466555667777889999999999998876432211  1356999999975   


Q ss_pred             CCCCCHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhChHHHHhhhC
Q 020090          285 DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTV  331 (331)
Q Consensus       285 ~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~klr~  331 (331)
                       ..++++++++++.++++||+|||+++++|++++|++|||+|+|+|+
T Consensus       273 -~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~  318 (490)
T PLN02500        273 -SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELRE  318 (490)
T ss_pred             -cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence             2489999999999999999999999999999999999999999985

>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
2ve3_A 444 Retinoic Acid Bound Cyanobacterial Cyp120a1 Length 1e-14
3dbg_A 467 Crystal Structure Of Cytochrome P450 170a1 (Cyp170a 3e-09
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1 Length = 444 Back     alignment and structure 
Iteration: 1

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 124/259 (47%), Gaps = 13/259 (5%)
Query: 51  LPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSK 110
           +P G  G P +GE+L F++         F  KR+  +G +FK+ +FG   I  + A  ++
Sbjct: 13  IPPGDFGLPWLGETLNFLNDG------DFGKKRQQQFGPIFKTRLFGKNVIFISGALANR 66
Query: 111 FVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDME 170
           F+   + + F   +P S   L+G +++    G + R    ++   F    L + + + M+
Sbjct: 67  FLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPK-MD 125
Query: 171 KYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSL 230
             +   +E W +   +    + + + F V     +  +   Q   L   F+ +I GL SL
Sbjct: 126 GIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMG-EKVSQNPQLFPWFETYIQGLFSL 184
Query: 231 PINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLM-MNNASDQPLT 289
           PI +P +   +S +A+  +   +++II++++    S     +D + +L+   + ++QPL+
Sbjct: 185 PIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSE----EDALGILLAARDDNNQPLS 240
Query: 290 DDLIADNMIDMMIPGEDSV 308
              + D ++ ++  G +++
Sbjct: 241 LPELKDQILLLLFAGHETL 259
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From Streptomyces Coelicolor Length = 467 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query331
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 9e-87
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 1e-41
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 8e-41
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 9e-40
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 1e-39
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 6e-38
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 2e-31
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 3e-30
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 3e-27
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 4e-18
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 5e-16
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 2e-13
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 2e-13
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 2e-13
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 3e-13
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 4e-13
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 3e-12
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 5e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 7e-06
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 1e-04
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 3e-04
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 3e-04
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 9e-04
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
 Score =  266 bits (683), Expect = 9e-87
 Identities = 61/294 (20%), Positives = 134/294 (45%), Gaps = 18/294 (6%)

Query: 40  TSQSHSHGLGQLPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTP 99
           TS ++ + L  +P G  G P +GE+L F+          F  KR+  +G +FK+ +FG  
Sbjct: 3   TSPTNLNSL-PIPPGDFGLPWLGETLNFL------NDGDFGKKRQQQFGPIFKTRLFGKN 55

Query: 100 TIVSTDAEVSKFVLQSDAKAFVPFYPKSLTELMGKSSILLINGGLQRRIHGLIGSFFKSA 159
            I  + A  ++F+   + + F   +P S   L+G +++    G + R    ++   F   
Sbjct: 56  VIFISGALANRFLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPR 115

Query: 160 DLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQ 219
            L + +   M+  +   +E W +   +    + + + F V     +     +  + L   
Sbjct: 116 TLDSYL-PKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQ-LFPW 173

Query: 220 FQEFISGLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLM 279
           F+ +I GL SLPI +P +   +S +A+  +   +++II++++    S     +D + +L+
Sbjct: 174 FETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPS----EEDALGILL 229

Query: 280 MNNASD---QPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLT 330
              A D   QPL+   + D ++ ++  G +++   ++     L  +    +++ 
Sbjct: 230 --AARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVR 281
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Length = 417 Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} PDB: 3lxi_A* Length = 421 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query331
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 100.0
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 100.0
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 100.0
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 100.0
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 100.0
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 100.0
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 100.0
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 100.0
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 100.0
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 100.0
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 100.0
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 100.0
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 100.0
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 100.0
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 100.0
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 100.0
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 100.0
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 100.0
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 100.0
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 100.0
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 100.0
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 100.0
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 100.0
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 100.0
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 100.0
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 100.0
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 100.0
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 100.0
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 100.0
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 100.0
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 100.0
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 100.0
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 100.0
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 100.0
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 100.0
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 100.0
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 100.0
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 100.0
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.98
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.98
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.98
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.98
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.98
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.98
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.98
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.98
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.98
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.97
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.97
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.97
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.97
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.97
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.97
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.97
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.97
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.97
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.97
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.97
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.97
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.97
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.96
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.96
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.96
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.96
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.96
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.95
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.95
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.95
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.95
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.94
2yjn_B 381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 99.69
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
Probab=100.00  E-value=6.6e-41  Score=295.53  Aligned_cols=274  Identities=16%  Similarity=0.234  Sum_probs=228.8

Q ss_pred             CCCCCCCCCC-CchhhchHHHHhhhccCCchHHHHHHHHHcCCceEecccCCcEEEEcChHHHHHHHhcCcccccccchh
Q 020090           48 LGQLPLGTLG-WPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPK  126 (331)
Q Consensus        48 ~~~~pp~p~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~  126 (331)
                      .++.||+|++ +|++||++.+..     +++.++.++++||||||++++++.++|+|+||+.+++++.+++..+.++...
T Consensus         9 g~~~PP~~~~~lP~iG~~~~~~~-----~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~   83 (461)
T 3ld6_A            9 GVKSPPYIFSPIPFLGHAIAFGK-----SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVY   83 (461)
T ss_dssp             -CCCCCBCCCSSTTTBTHHHHHH-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHH
T ss_pred             CCCCCCCCCCCcCeeeeHHHhhh-----CHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcch
Confidence            3467788775 899999999875     8999999999999999999999999999999999999998887777765432


Q ss_pred             --hhhhhcCCccccccCchhHHHHHhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHHHH
Q 020090          127 --SLTELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKAL  204 (331)
Q Consensus       127 --~~~~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  204 (331)
                        .....+|...++..+|+.|+++|+++.+.|+...+.. +.+.+.+.++++++.+.+++.+|+.+.+..+++++++.++
T Consensus        84 ~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  162 (461)
T 3ld6_A           84 SRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQ-HVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCL  162 (461)
T ss_dssp             HHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHH-HHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhccCCCccccCCCcHHHHHHHHhccccccHHHHhh-hhHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHH
Confidence              2255667534456789999999999999999999987 9999999999999999888899999999999999999999


Q ss_pred             cCCCchHH-HHHHHHHHHHHHHhh----hccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccHHHHHh
Q 020090          205 INLDPGEQ-MEILKKQFQEFISGL----MSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLM  279 (331)
Q Consensus       205 ~G~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll  279 (331)
                      ||.+++.+ ...+...+..+...+    ..++.++|...+.+..++.+++.+++.+.|++++...+    ..+|+++.|+
T Consensus       163 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~----~~~d~l~~ll  238 (461)
T 3ld6_A          163 HGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQE----KIDDILQTLL  238 (461)
T ss_dssp             TCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCC----CCCSHHHHHH
T ss_pred             cCcchhhhhhhhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCcchhhhhH
Confidence            99887543 222333333333222    23566778777788888999999999999999886653    3679999999


Q ss_pred             hccC-CCCCCCHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhChHHHHhhhC
Q 020090          280 MNNA-SDQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTV  331 (331)
Q Consensus       280 ~~~~-~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~klr~  331 (331)
                      ++.. ++..++++++++++.++++||+|||+++++|++++|++||++|+|||+
T Consensus       239 ~~~~~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~  291 (461)
T 3ld6_A          239 DATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYL  291 (461)
T ss_dssp             TCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HhhhcccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHH
Confidence            8753 456799999999999999999999999999999999999999999984
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 331
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 3e-24
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 2e-20
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 4e-20
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 1e-19
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 1e-15
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 3e-15
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 9e-15
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 3e-12
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome p450 152a1 (Bs-beta)
species: Bacillus subtilis [TaxId: 1423]

 Score =  100 bits (248), Expect = 3e-24
 Identities = 37/267 (13%), Positives = 91/267 (34%), Gaps = 15/267 (5%)

Query: 58  WPIVGESLEFISCALTDRPESFMDKRRCMYG-KVFKSHIFGTPTIVSTDAEVSKFVLQSD 116
              +  SL  +          F+  R   Y   +F++ + G   I  T AE +K    +D
Sbjct: 3   DKSLDNSLTLLK-----EGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTD 57

Query: 117 AKAFVPFYPKSLTE-LMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHK 175
                   PK + + L G ++I  ++G        L  S       K ++   M +    
Sbjct: 58  RFQRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQK-RLAELMTEEWKA 116

Query: 176 SMENWMQDQPIYIQDESKNIAFQVLVKALINLDPGEQMEILKKQFQEFISGLMSLPINIP 235
           ++  W +   + + +E+K I  +V            +++     F + +    +      
Sbjct: 117 AVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVKERADDFIDMVDAFGA-----V 171

Query: 236 GSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNASDQPLTDDLIAD 295
           G + ++  +A+ +    I+ +I+                +  +  +   D    D  +A 
Sbjct: 172 GPRHWKGRRARPRAEEWIEVMIE--DARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAA 229

Query: 296 NMIDMMIPGEDSVPVLMTLAVKYLSDY 322
             +  ++    ++   +  +   L ++
Sbjct: 230 IELINVLRPIVAISYFLVFSALALHEH 256
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query331
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 100.0
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 100.0
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 100.0
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 100.0
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 100.0
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 100.0
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 100.0
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 100.0
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.95
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.95
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.93
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.93
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.93
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.93
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.92
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.89
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.88
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.85
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.85
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.79
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 99.73
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome p450 14 alpha-sterol demethylase (cyp51)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.6e-40  Score=289.83  Aligned_cols=272  Identities=17%  Similarity=0.262  Sum_probs=210.9

Q ss_pred             CCCCCCCCchhhchHHHHhhhccCCchHHHHHHHHHcCCceEecccCCcEEEEcChHHHHHHHhcCcccccccchhh-hh
Q 020090           51 LPLGTLGWPIVGESLEFISCALTDRPESFMDKRRCMYGKVFKSHIFGTPTIVSTDAEVSKFVLQSDAKAFVPFYPKS-LT  129 (331)
Q Consensus        51 ~pp~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvv~~~~~~~~i~~~~~~~~~~~~~~~-~~  129 (331)
                      +||+|.+||++||+..+..     |++.++.++++||||||++++++.++++|+||+++++++++++..+.++.... +.
T Consensus         2 lP~~p~~~P~iG~~~~f~~-----d~~~f~~~~~~kyG~if~~~~~~~~~v~v~~p~~v~~i~~~~~~~~~~~~~~~~~~   76 (445)
T d2ciba1           2 LPRVSGGHDEHGHLEEFRT-----DPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMT   76 (445)
T ss_dssp             CCBCSCCCBTTBTHHHHTT-----CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGH
T ss_pred             CCCCCCCcCcCcCHHHHhH-----CHHHHHHHHHHHHCCEEEEEECCceEEEEcCHHHHHHHHhCCcccccCCccchhhH
Confidence            6899999999999999864     89999999999999999999999999999999999999988876776654433 35


Q ss_pred             hhcCCccccccCchhHHHHHhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhcCCceeeHHHHHHHHHHHHHHHHcCCCc
Q 020090          130 ELMGKSSILLINGGLQRRIHGLIGSFFKSADLKAQITRDMEKYIHKSMENWMQDQPIYIQDESKNIAFQVLVKALINLDP  209 (331)
Q Consensus       130 ~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~~~  209 (331)
                      ..+|. |++. +++.|+.+|+.+.+.|+..++.. +.+.+.+.++++++.|.+++++|+.+.++++++++++.++||.++
T Consensus        77 ~~~g~-g~~~-~~~~~~~~~~~~~~~~~~~~l~~-~~~~i~~~~~~~~~~l~~~~~vdl~~~~~~~~~~~~~~~~fG~~~  153 (445)
T d2ciba1          77 PIFGE-GVVF-DASPERRKEMLHNAALRGEQMKG-HAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKF  153 (445)
T ss_dssp             HHHC----------------------CCHHHHHH-HHHHHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHHHHHTCHHH
T ss_pred             hhcCC-ceee-cCchHHHHHHHhccccCcccccc-chHHHHHHHHHhhhhcccCCCcchHHhhhhhcceeeeeccccccc
Confidence            56674 6554 56778889999999999999986 999999999999999988889999999999999999999999887


Q ss_pred             hHH-HHHHHHHHHHHHH---hhhccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccHHHHHhhccCC-
Q 020090          210 GEQ-MEILKKQFQEFIS---GLMSLPINIPGSQLYRSLQAKKKMARLIQEIIQSKRDGGMSNINVPKDVIDVLMMNNAS-  284 (331)
Q Consensus       210 ~~~-~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~-  284 (331)
                      +++ ...+.+.+..+..   .+..++.++|....++..++++++.+++.++++++++....+ +..+|+++.|++..++ 
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~dll~~ll~~~~~~  232 (445)
T d2ciba1         154 RDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTD-KSDRDMLDVLIAVKAET  232 (445)
T ss_dssp             HTTCCHHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCCHHHHHHHCBCTT
T ss_pred             cchhhhHHHHHHHHhhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhhccccccc-ccccchhhhhhcccccc
Confidence            542 2333344444333   334455667777778889999999999999999988877553 3467999999987532 


Q ss_pred             -CCCCCHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhhChHHHHhhhC
Q 020090          285 -DQPLTDDLIADNMIDMMIPGEDSVPVLMTLAVKYLSDYPAALQQLTV  331 (331)
Q Consensus       285 -~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~klr~  331 (331)
                       +..+++++++++++.+++||+|||+++++|++++|++||++|+|||+
T Consensus       233 ~~~~ls~~ei~~~~~~ll~ag~~tt~~~l~~~l~~L~~~p~~~~~lr~  280 (445)
T d2ciba1         233 GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVID  280 (445)
T ss_dssp             SSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             ccccCCcchhhhhhhhhhhhccccchhhcccccccccccccccccccc
Confidence             33589999999999999999999999999999999999999999984
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure