Citrus Sinensis ID: 020101


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-
MARQVSSRVVRSLYMSSEICCGQSRSFTTAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVFKQRGLTK
cHHHHHHHHHHHHHHccccccccccccccccccccCEECcccccEEEccccccHHHHHHHHHHHHcccEEcccccccccCEEccccccccHHHHHHHHcccEEEEECccccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHcccccEEEEECcccccccccHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHcccccEEEEEEccccccccccccccCECccccccHHHHHHHHHHcccEEcccHHHHHHHHHHHHHHccccc
***************************TTA*PPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVFKQRG***
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MARQVSSRVVRSLYMSSEICCGQSRSFTTAPPPAPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASAIYVPPPFAAAAILEAMEAELDLVVCITEGIPQHDMVRVKAALNNQSKTRLVGPNCPGVIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCVTKFIADPQTEGIILIGEIGGTAEEDAAALIKESGTEKPIVAFIAGLTAPPGRRMGHAGAIVSGGKGTAQDKIKTLREAGVTVVESPAKIGAAMLEVFKQRGLTK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial confidentQ6ZL94
Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial Catalyzes the ATP- or GTP-dependent ligation of succinate and CoA to form succinyl-CoA. The nature of the beta subunit determines the nucleotide specificity.confidentO19069
Succinyl-CoA ligase [ADP-forming] subunit alpha confidentQ1RH56

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.2.-.-Forming carbon-sulfur bonds.probable
6.2.1.-Acid--thiol ligases.probable
6.2.1.5Succinate--CoA ligase (ADP-forming).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2FP4, chain A
Confidence level:very confident
Coverage over the Query: 26-329
View the alignment between query and template
View the model in PyMOL
Template: 1ZCJ, chain A
Confidence level:probable
Coverage over the Query: 7-120
View the alignment between query and template
View the model in PyMOL