Citrus Sinensis ID: 020127

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
MAAATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLIDLQVLDGPRRLDIIKQIGQACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESERLKSYSDDPSKSTRLSTSFNVNTEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFRYNYARGLVLRLLEAISESLGLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVLRKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAKFWNRGLVDECCLDLFKASTA
ccccccHHHHHHHHHccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHccccccccEEEccccccccccccccEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccEEEEEEEccccccccccccccccccccccEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEEcccccEEEEEEEEccccccEEEcccccccccccccccccccccEEEccccccccc
ccccccHHHHHHHHHccccccHHcccccHccccccccccccccccEEEccccccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEEEEcccccccccHHHHEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccHHHcccccccccccccHHHHHHHHHHccccc
MAAATTKLLLSDLAStvksvpsnyirpisdrpnltevqisdgsiplidlqvldgprrLDIIKQIGQAcqhdgffqvknhgipetIINSMLSITRAFFklpeserlksysddpskstrlstsfnvntekvsnwrDYLRLHCYplqdyihewpsnppsfrynYARGLVLRLLEAISESLGLQRDYIDKALGkhrqhmalnyyphcpqpdltyglpghidpnlITVLLqddvpglqvlrkgkwlpvnpipntfivKIGDQMQVLSNDRYKSVLHRALVNcdkerisiptfycpspdaviapakdliderhpakfwnrglvdeCCLDLFKASTA
MAAATTKLLLSDLastvksvpsnyirpisdrpnlTEVQISDGSIPLIDLQVLDGPRRLDIIKQIGQACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESerlksysddpskstrlstsfnvntekvsnwrdYLRLHCYPLQDYIHEWPSNPPSFRYNYARGLVLRLLEAISESLGLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVlrkgkwlpvnpIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAKFWNRGLVDECCLDLFKASTA
MAAATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLIDLQVLDGPRRLDIIKQIGQACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESERLKSYSDDPSKSTRLSTSFNVNTEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFRYNYARGLVLRLLEAISESLGLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVLRKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAKFWNRGLVDECCLDLFKASTA
**********************NYIRPI****NLTEVQISDGSIPLIDLQVLDGPRRLDIIKQIGQACQHDGFFQVKNHGIPETIINSMLSITRAFFKL***********************NVNTEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFRYNYARGLVLRLLEAISESLGLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVLRKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAKFWNRGLVDECCLDLFK****
*****TKLL*SDLASTVKSVPSNYIRPI************DGSIPLIDLQVLDGPRRLDIIKQIGQACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESERLK*******KSTRLSTSFNVNTEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFRYNYARGLVLRLLEAISESLGLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVLRKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAKFWNRGLVDECCLDLFKA***
MAAATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLIDLQVLDGPRRLDIIKQIGQACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESE***************STSFNVNTEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFRYNYARGLVLRLLEAISESLGLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVLRKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAKFWNRGLVDECCLDLFKASTA
*****TKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLIDLQVLDGPRRLDIIKQIGQACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESERLKSYSDDPSKSTRLSTSFNVNTEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFRYNYARGLVLRLLEAISESLGLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVLRKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAKFWNRGLVDECCLDLFK****
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MAAATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLIDLQVLDGPRRLDIIKQIGQACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESERLKSYSDDPSKSTRLSTSFNVNTEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFRYNYARGLVLRLLEAISESLGLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVLRKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERHPAKFWNRGLVDECCLDLFKASTA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query330 2.2.26 [Sep-21-2011]
Q05963356 Naringenin,2-oxoglutarate N/A no 0.836 0.775 0.384 3e-53
Q05964365 Naringenin,2-oxoglutarate N/A no 0.830 0.750 0.390 8e-53
P28038377 Naringenin,2-oxoglutarate N/A no 0.893 0.782 0.366 7e-52
Q7XZQ7368 Flavanone 3-dioxygenase O N/A no 0.848 0.760 0.378 1e-51
Q9ZWQ9335 Flavonol synthase/flavano N/A no 0.951 0.937 0.342 2e-51
Q05965357 Naringenin,2-oxoglutarate N/A no 0.869 0.803 0.369 8e-51
Q7XZQ8365 Flavone synthase OS=Petro N/A no 0.848 0.767 0.371 1e-50
Q06942364 Naringenin,2-oxoglutarate N/A no 0.881 0.799 0.370 4e-50
Q9S818358 Naringenin,2-oxoglutarate no no 0.869 0.801 0.376 7e-50
Q7XZQ6337 Flavonol synthase/flavano N/A no 0.945 0.925 0.350 1e-49
>sp|Q05963|FL3H_CALCH Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1 Back     alignment and function desciption
 Score =  209 bits (531), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 111/289 (38%), Positives = 166/289 (57%), Gaps = 13/289 (4%)

Query: 22  SNYIRPISDRPNLTEVQISDGSIPLIDLQVLDGPRRLDIIKQIGQACQHDGFFQVKNHGI 81
           + ++R   +RP +     S+  IP+I L  +DG RR +I  +I +AC+  G FQV +HG+
Sbjct: 17  NKFVRDEDERPKVPYNTFSN-EIPVISLAGIDGCRRAEICDEIVKACEDWGIFQVVDHGV 75

Query: 82  PETIINSMLSITRAFFKLPESERLKSYSDDPSKSTRLSTSFNVNTEKVSNWRDYLRLHCY 141
              +++ M  + R FF LP  E+L+ +     K      S ++  E V +WR+ +    Y
Sbjct: 76  DTKLLSDMTGLARDFFHLPTQEKLR-FDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSY 134

Query: 142 PLQ--DYIHEWPSNPPSFRY---NYAR---GLVLRLLEAISESLGLQRDYIDKALGKHRQ 193
           P++  DY   WP  P  +R     Y++   GL  +LLE +SE++GL+++ + KA     Q
Sbjct: 135 PIKARDY-SRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACVDMDQ 193

Query: 194 HMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVLRKG--KWLPVNPIPNTFI 251
            + +NYYP CPQPDLT GL  H DP  IT+LLQD V GLQ  R G   W+ V P+   F+
Sbjct: 194 KVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGESWITVKPVEGAFV 253

Query: 252 VKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAK 300
           V +GD    LSN R+K+  H+A+VN    R+SI TF  P+P+A++ P K
Sbjct: 254 VNLGDHGHYLSNGRFKNADHQAVVNSSTSRLSIATFQNPAPEAIVYPLK 302
Catalyzes the 3-beta-hydroxylation of 2S-flavanones to 2R,3R-dihydroflavonols which are intermediates in the biosynthesis of flavonols, anthocyanidins, catechins and proanthocyanidins in plants.
Callistephus chinensis (taxid: 13379)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 9
>sp|Q05964|FL3H_DIACA Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|P28038|FL3H_HORVU Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ7|FL3H_PETCR Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1 Back     alignment and function description
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|Q05965|FL3H_MATIN Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ8|FNSI_PETCR Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1 Back     alignment and function description
>sp|Q06942|FL3H_MALDO Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|Q9S818|FL3H_ARATH Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1 Back     alignment and function description
>sp|Q7XZQ6|FLS_PETCR Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query330
224115488350 predicted protein [Populus trichocarpa] 0.990 0.934 0.757 1e-151
224061517349 predicted protein [Populus trichocarpa] 0.981 0.928 0.737 1e-145
255555819346 1-aminocyclopropane-1-carboxylate oxidas 0.990 0.945 0.727 1e-143
225426516348 PREDICTED: naringenin,2-oxoglutarate 3-d 0.993 0.942 0.702 1e-143
225426514348 PREDICTED: naringenin,2-oxoglutarate 3-d 1.0 0.948 0.686 1e-140
225453648344 PREDICTED: hyoscyamine 6-dioxygenase [Vi 0.981 0.941 0.705 1e-137
356559589345 PREDICTED: flavonol synthase/flavanone 3 0.981 0.939 0.681 1e-135
255548069344 1-aminocyclopropane-1-carboxylate oxidas 0.978 0.938 0.692 1e-135
356520211345 PREDICTED: naringenin,2-oxoglutarate 3-d 0.981 0.939 0.675 1e-134
297742473321 unnamed protein product [Vitis vinifera] 0.942 0.968 0.706 1e-133
>gi|224115488|ref|XP_002317046.1| predicted protein [Populus trichocarpa] gi|222860111|gb|EEE97658.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 262/346 (75%), Positives = 295/346 (85%), Gaps = 19/346 (5%)

Query: 3   AATTKLLLSDLAST-VKSVPSNYIRPISDRPNLTEVQISDGSIPLIDLQVLDGPRRLDII 61
           A T KLLL+DLAS+ VK +PSN+IRPISDRPNL++VQISDGSIPLIDL+ LDGP    II
Sbjct: 2   APTAKLLLADLASSGVKQIPSNFIRPISDRPNLSDVQISDGSIPLIDLRGLDGPNHSTII 61

Query: 62  KQIGQACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESERLKSYSDDPSKSTRLSTS 121
           +QIGQACQ DGFFQVKNHGIPE +I+ +L+I R FFKLPESERLK+YSDDP+K+TRLSTS
Sbjct: 62  EQIGQACQRDGFFQVKNHGIPEEMISIILNIARQFFKLPESERLKNYSDDPTKTTRLSTS 121

Query: 122 FNVNTEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFRYNYA------RGLVLRLLEAISE 175
           FN+ TE+VS+WRD+LRLHCYPL+DY+HEWPSNPPSFR + A      RGLVLRLLEAISE
Sbjct: 122 FNIKTEQVSSWRDFLRLHCYPLEDYVHEWPSNPPSFRKDVAEYCTSVRGLVLRLLEAISE 181

Query: 176 SLGLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVL 235
           SLGL+RDYIDK LG H QHMA+NYYP CPQP+LTYGLPGH DPNLIT+LLQD VPGLQVL
Sbjct: 182 SLGLERDYIDKKLGGHGQHMAMNYYPPCPQPELTYGLPGHTDPNLITILLQDHVPGLQVL 241

Query: 236 RKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAV 295
           R GKW+ VNPIPNTFIV IGDQMQVLSNDRYKSVLHRA+VN DK+RISIPTFYCPSPDAV
Sbjct: 242 RNGKWIAVNPIPNTFIVNIGDQMQVLSNDRYKSVLHRAVVNSDKDRISIPTFYCPSPDAV 301

Query: 296 IAPAKDLIDERHPA------------KFWNRGLVDECCLDLFKAST 329
           I P K+L+D+ HPA            KFWN+GLV ECCLDLFK S 
Sbjct: 302 IGPPKELVDDEHPAVYRDFTYGEYYEKFWNKGLVKECCLDLFKPSN 347

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224061517|ref|XP_002300519.1| predicted protein [Populus trichocarpa] gi|222847777|gb|EEE85324.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255555819|ref|XP_002518945.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] gi|223541932|gb|EEF43478.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225426516|ref|XP_002278004.1| PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Vitis vinifera] gi|297742472|emb|CBI34621.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225426514|ref|XP_002278024.1| PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Vitis vinifera] Back     alignment and taxonomy information
>gi|225453648|ref|XP_002267625.1| PREDICTED: hyoscyamine 6-dioxygenase [Vitis vinifera] gi|296089022|emb|CBI38725.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356559589|ref|XP_003548081.1| PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Glycine max] Back     alignment and taxonomy information
>gi|255548069|ref|XP_002515091.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] gi|223545571|gb|EEF47075.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356520211|ref|XP_003528757.1| PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|297742473|emb|CBI34622.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query330
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.990 0.939 0.636 2.4e-115
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.987 0.934 0.627 4.1e-113
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 0.875 0.847 0.549 6.9e-86
TAIR|locus:2040575366 AT2G36690 [Arabidopsis thalian 0.884 0.797 0.414 8.1e-60
TAIR|locus:2042356357 AT2G44800 [Arabidopsis thalian 0.915 0.845 0.387 3e-53
TAIR|locus:2081962357 AT3G60290 [Arabidopsis thalian 0.881 0.815 0.398 3e-53
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.884 0.787 0.402 1.7e-52
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.903 0.844 0.376 5.2e-49
TAIR|locus:2081008358 F3H "flavanone 3-hydroxylase" 0.869 0.801 0.376 1.4e-48
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.872 0.797 0.387 2.3e-48
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1137 (405.3 bits), Expect = 2.4e-115, P = 2.4e-115
 Identities = 221/347 (63%), Positives = 261/347 (75%)

Query:     4 ATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLIDLQVLDGPRRLDIIKQ 63
             A +KLL+SD+AS V  VPSNY+RP+SDRP ++EVQ S  SIPLIDL  L GP R DII Q
Sbjct:     2 AASKLLVSDIASVVDHVPSNYVRPVSDRPKMSEVQTSGDSIPLIDLHDLHGPNRADIINQ 61

Query:    64 IGQACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESERLKSYSDDPSKSTRLSTSFN 123
                AC   GFFQ+KNHG+PE  I  M++  R FF+  ESER+K YS D  K+TRLSTSFN
Sbjct:    62 FAHACSSCGFFQIKNHGVPEETIKKMMNAAREFFRQSESERVKHYSADTKKTTRLSTSFN 121

Query:   124 VNTEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFRY---NYA---RGLVLRLLEAISESL 177
             V+ EKVSNWRD+LRLHCYP++D+I+EWPS P SFR     YA   R LVL LLEAISESL
Sbjct:   122 VSKEKVSNWRDFLRLHCYPIEDFINEWPSTPISFREVTAEYATSVRALVLTLLEAISESL 181

Query:   178 GLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVLRK 237
             GL +D +   +GKH QHMA+NYYP CPQP+LTYGLPGH D NLITVLLQD+V GLQV + 
Sbjct:   182 GLAKDRVSNTIGKHGQHMAINYYPRCPQPELTYGLPGHKDANLITVLLQDEVSGLQVFKD 241

Query:   238 GKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIA 297
             GKW+ VNP+PNTFIV +GDQMQV+SN++YKSVLHRA+VN D ERISIPTFYCPS DAVI+
Sbjct:   242 GKWIAVNPVPNTFIVNLGDQMQVISNEKYKSVLHRAVVNSDMERISIPTFYCPSEDAVIS 301

Query:   298 PAKDLIDERH--PA------------KFWNRGLVDECCLDLFKASTA 330
             PA++LI+E    PA            KFW+     E C+D FKASTA
Sbjct:   302 PAQELINEEEDSPAIYRNFTYAEYFEKFWDTAFDTESCIDSFKASTA 348
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0019748 "secondary metabolic process" evidence=ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040575 AT2G36690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042356 AT2G44800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081962 AT3G60290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081008 F3H "flavanone 3-hydroxylase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.9LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 1e-179
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-155
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-100
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-82
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-77
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-75
PLN02704335 PLN02704, PLN02704, flavonol synthase 3e-70
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 5e-69
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 5e-67
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 1e-62
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 1e-61
PLN02216357 PLN02216, PLN02216, protein SRG1 7e-58
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 3e-54
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-51
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-49
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-49
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-48
PLN02997325 PLN02997, PLN02997, flavonol synthase 4e-46
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 4e-46
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-41
PLN02485329 PLN02485, PLN02485, oxidoreductase 4e-40
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-37
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 5e-36
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 4e-33
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 4e-26
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 6e-24
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 3e-18
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-12
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  499 bits (1286), Expect = e-179
 Identities = 224/348 (64%), Positives = 264/348 (75%), Gaps = 20/348 (5%)

Query: 3   AATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEVQISDGSIPLIDLQVLDGPRRLDIIK 62
           +AT+KLL+SD+AS V  VPSNY+RP+SDRPN++EV+ S  SIPLIDL+ L GP R DII 
Sbjct: 1   SATSKLLVSDIASVVDHVPSNYVRPVSDRPNMSEVETSGDSIPLIDLRDLHGPNRADIIN 60

Query: 63  QIGQACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESERLKSYSDDPSKSTRLSTSF 122
           Q   AC   GFFQ+KNHG+PE  I  M+++ R FF   ESER+K YS D  K+TRLSTSF
Sbjct: 61  QFAHACSSYGFFQIKNHGVPEETIKKMMNVAREFFHQSESERVKHYSADTKKTTRLSTSF 120

Query: 123 NVNTEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFR---YNYA---RGLVLRLLEAISES 176
           NV+ EKVSNWRD+LRLHCYP++D+I EWPS P SFR     YA   R LVL LLEAISES
Sbjct: 121 NVSKEKVSNWRDFLRLHCYPIEDFIEEWPSTPISFREVTAEYATSVRALVLTLLEAISES 180

Query: 177 LGLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVLR 236
           LGL++D +   LGKH QHMA+NYYP CPQP+LTYGLPGH D NLITVLLQD+V GLQV +
Sbjct: 181 LGLEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQDEVSGLQVFK 240

Query: 237 KGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVI 296
            GKW+ VNPIPNTFIV +GDQMQV+SND+YKSVLHRA+VN DKERISIPTFYCPS DAVI
Sbjct: 241 DGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSEDAVI 300

Query: 297 APAKDLIDERHPA--------------KFWNRGLVDECCLDLFKASTA 330
            PA++LI+E   +              KFW+     E C+D FKASTA
Sbjct: 301 GPAQELINEEEDSLAIYRNFTYAEYFEKFWDTAFATESCIDSFKASTA 348

Length = 348
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 330
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02485329 oxidoreductase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.93
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.9
PLN03176120 flavanone-3-hydroxylase; Provisional 99.88
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.74
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 96.04
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.39
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 91.92
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 82.65
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 82.12
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=2.5e-79  Score=580.11  Aligned_cols=327  Identities=68%  Similarity=1.152  Sum_probs=282.2

Q ss_pred             hhhHHHHHhhhhhccCCCCCcccCCCCCCCCCccC-CCCCCCCceEeCCCCCCCcHHHHHHHHHHHhhcccEEEEEccCC
Q 020127            3 AATTKLLLSDLASTVKSVPSNYIRPISDRPNLTEV-QISDGSIPLIDLQVLDGPRRLDIIKQIGQACQHDGFFQVKNHGI   81 (330)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~-~~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhGi   81 (330)
                      |++.|++||+|+..+..||+.|++|.++++..... .+. .+||+|||+.+.++++.+++++|.+||++||||||+||||
T Consensus         1 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~iPvIDls~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGI   79 (348)
T PLN02912          1 SATSKLLVSDIASVVDHVPSNYVRPVSDRPNMSEVETSG-DSIPLIDLRDLHGPNRADIINQFAHACSSYGFFQIKNHGV   79 (348)
T ss_pred             CccchhHHHHHhcCCCCCCHHhcCCchhccccccccccC-CCCCeEECcccCCcCHHHHHHHHHHHHHHCCEEEEEeCCC
Confidence            46789999999988999999999999888743211 133 6899999999865556778999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHhhCCCHHHHcccccCCCCCceecccccccCCCCcccccccccccccCCCccCCCCCCCCCchhHH-
Q 020127           82 PETIINSMLSITRAFFKLPESERLKSYSDDPSKSTRLSTSFNVNTEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFRYN-  160 (330)
Q Consensus        82 ~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~p~~~~~~~wP~~~~~fr~~-  160 (330)
                      +.++++++++++++||+||.|+|+++......+..+|...+........+|+|.+.+...+....+|.||..++.||+. 
T Consensus        80 ~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~n~wP~~~~~fr~~~  159 (348)
T PLN02912         80 PEETIKKMMNVAREFFHQSESERVKHYSADTKKTTRLSTSFNVSKEKVSNWRDFLRLHCYPIEDFIEEWPSTPISFREVT  159 (348)
T ss_pred             CHHHHHHHHHHHHHHhcCCHHHHHhHhhcCCCCcccccccccccccccCCchheEEEeecCcccccccCcchhHHHHHHH
Confidence            9999999999999999999999999654332223333222222334567899998876444433478999988899988 


Q ss_pred             -----HHHHHHHHHHHHHHHHcCCChHHHHHHhcCcccceEEeecCCCCCCCCCCCcccccCCCcEEEEeeCCCCCceee
Q 020127          161 -----YARGLVLRLLEAISESLGLQRDYIDKALGKHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVL  235 (330)
Q Consensus       161 -----~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqv~  235 (330)
                           +|.+|+.+|+++||++||+++++|.+++....+.||++|||||+.++..+|+++|||+|+||||+||+++||||+
T Consensus       160 ~~y~~~~~~l~~~il~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YPp~~~~~~~~G~~~HtD~g~lTlL~Qd~v~GLQV~  239 (348)
T PLN02912        160 AEYATSVRALVLTLLEAISESLGLEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLPGHKDANLITVLLQDEVSGLQVF  239 (348)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCccceeeeeecCCCCChhhcCCcCCCcCCCceEEEEECCCCceEEE
Confidence                 999999999999999999999999998887788999999999998878999999999999999999999999999


Q ss_pred             eCCcEEEccCCCCeEEEEeCchhhhhhcCcccCccceeecCCCCCeEEEEEeecCCCCCeEecCcCccCcCC--cc----
Q 020127          236 RKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVIAPAKDLIDERH--PA----  309 (330)
Q Consensus       236 ~~g~W~~V~p~~g~lvVniGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~--p~----  309 (330)
                      ++|+|++|+|.||++|||+||+||+||||+||||+|||+.++.++|||++||++|+.|++|+|+++|+++++  |+    
T Consensus       240 ~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~v~~~~~~p~~y~~  319 (348)
T PLN02912        240 KDGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSEDAVIGPAQELINEEEDSLAIYRN  319 (348)
T ss_pred             ECCcEEECCCcCCeEEEEcCHHHHHHhCCEEEcccccccCCCCCCEEEEEEEecCCCCCeEeCCHHHhCcCCCCCCCCCC
Confidence            999999999999999999999999999999999999999888889999999999999999999999998764  55    


Q ss_pred             --------ccccccCCcccccccccccCC
Q 020127          310 --------KFWNRGLVDECCLDLFKASTA  330 (330)
Q Consensus       310 --------~~~~~~~~~~~~~~~~~~~~~  330 (330)
                              .++.+..++++.++++|.+||
T Consensus       320 ~~~~ey~~~~~~~~~~~~~~l~~~~~~~~  348 (348)
T PLN02912        320 FTYAEYFEKFWDTAFATESCIDSFKASTA  348 (348)
T ss_pred             CcHHHHHHHHHhcccCCcchhhhhhcccC
Confidence                    234556778899999999997

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 9e-43
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 9e-43
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 7e-41
1w9y_A319 The Structure Of Acc Oxidase Length = 319 2e-36
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 4e-22
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-11
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 4e-10
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 4e-10
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  170 bits (431), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 168/331 (50%), Gaps = 20/331 (6%)
Query: 15  STVKSVPSNYIRPISDRPNLTEV----QISDG-SIPLIDLQVL---DGPRRLDIIKQIGQ 66
           S + S+P  YIRP  +  ++ +V    +  DG  +P IDL+ +   D   R + I+++ +
Sbjct: 13  SGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKK 72
Query: 67  ACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESERLKSYSDDPS-KSTRLSTSFNVN 125
           A    G   + NHGIP  ++  +      FF L   E+ K  +D  + K     +    N
Sbjct: 73  ASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANN 132
Query: 126 TEKVSNWRDYLRLHCYPLQDY-IHEWPSNPPSF---RYNYARGLVL---RLLEAISESLG 178
                 W DY     YP +   +  WP  P  +      YA+ L L   ++ +A+S  LG
Sbjct: 133 ASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLG 192
Query: 179 LQRDYIDKALGKHRQ---HMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVL 235
           L+ D ++K +G   +    M +NYYP CPQP+L  G+  H D + +T +L + VPGLQ+ 
Sbjct: 193 LEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF 252
Query: 236 RKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDA- 294
            +GKW+    +P++ ++ IGD +++LSN +YKS+LHR LVN +K RIS   F  P  D  
Sbjct: 253 YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKI 312
Query: 295 VIAPAKDLIDERHPAKFWNRGLVDECCLDLF 325
           V+ P  +++    PAKF  R         LF
Sbjct: 313 VLKPLPEMVSVESPAKFPPRTFAQHIEHKLF 343
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-143
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-129
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 6e-99
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 7e-90
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-87
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 5e-87
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  406 bits (1046), Expect = e-143
 Identities = 100/317 (31%), Positives = 162/317 (51%), Gaps = 20/317 (6%)

Query: 15  STVKSVPSNYIRPISDRPNLTEVQISDG-----SIPLIDLQVLDGP---RRLDIIKQIGQ 66
           S + S+P  YIRP  +  ++ +V + +       +P IDL+ ++      R + I+++ +
Sbjct: 13  SGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKK 72

Query: 67  ACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESERLKSYSDDPSKSTRL-STSFNVN 125
           A    G   + NHGIP  ++  +      FF L   E+ K  +D  +   +   +    N
Sbjct: 73  ASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANN 132

Query: 126 TEKVSNWRDYLRLHCYPLQDY-IHEWPSNPPSFR---YNYA---RGLVLRLLEAISESLG 178
                 W DY     YP +   +  WP  P  +      YA   R L  ++ +A+S  LG
Sbjct: 133 ASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLG 192

Query: 179 LQRDYIDKALGKH---RQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVL 235
           L+ D ++K +G        M +NYYP CPQP+L  G+  H D + +T +L + VPGLQ+ 
Sbjct: 193 LEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF 252

Query: 236 RKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDA- 294
            +GKW+    +P++ ++ IGD +++LSN +YKS+LHR LVN +K RIS   F  P  D  
Sbjct: 253 YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKI 312

Query: 295 VIAPAKDLIDERHPAKF 311
           V+ P  +++    PAKF
Sbjct: 313 VLKPLPEMVSVESPAKF 329
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query330
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.84
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.25
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 90.55
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 89.04
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 88.06
3i3q_A211 Alpha-ketoglutarate-dependent dioxygenase ALKB; be 84.99
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 82.46
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 81.25
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=1.6e-76  Score=563.03  Aligned_cols=303  Identities=33%  Similarity=0.631  Sum_probs=269.1

Q ss_pred             HHHhhhhh-ccCCCCCcccCCCCCCCCCcc---CC---CCCCCCceEeCCCCCCC---cHHHHHHHHHHHhhcccEEEEE
Q 020127            8 LLLSDLAS-TVKSVPSNYIRPISDRPNLTE---VQ---ISDGSIPLIDLQVLDGP---RRLDIIKQIGQACQHDGFFQVK   77 (330)
Q Consensus         8 ~~~~~~~~-~~~~~p~~~~~p~~~~~~~~~---~~---~~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~   77 (330)
                      .+|++|++ .+.+||++|++|+++++....   ..   .. .+||||||+.|.++   .+.+++++|.+||++||||||+
T Consensus         5 ~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~-~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            5 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDG-PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCS-CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             ccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccC-CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            46888886 478999999999888875321   00   12 46999999999754   3677899999999999999999


Q ss_pred             ccCCCHHHHHHHHHHHHHhhCCCHHHHcccccCCC-CCceecccccccCCCCcccccccccccccCCCc-cCCCCCCCCC
Q 020127           78 NHGIPETIINSMLSITRAFFKLPESERLKSYSDDP-SKSTRLSTSFNVNTEKVSNWRDYLRLHCYPLQD-YIHEWPSNPP  155 (330)
Q Consensus        78 nhGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~GY~~~~~~~~~~~~d~~E~~~~~~~p~~~-~~~~wP~~~~  155 (330)
                      ||||+.++++++++.+++||+||.|+|+++..... ..++||+........+..||+|.|.++..|... .+|.||+.++
T Consensus        84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~  163 (356)
T 1gp6_A           84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  163 (356)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence            99999999999999999999999999999987653 468999765544456678999999997766432 2789999889


Q ss_pred             chhHH------HHHHHHHHHHHHHHHHcCCChHHHHHHhc---CcccceEEeecCCCCCCCCCCCcccccCCCcEEEEee
Q 020127          156 SFRYN------YARGLVLRLLEAISESLGLQRDYIDKALG---KHRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQ  226 (330)
Q Consensus       156 ~fr~~------~~~~la~~ll~~la~~Lgl~~~~f~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q  226 (330)
                      .||+.      +|.+|+.+|+++|+++||+++++|.+.+.   .+.+.||++|||||+.++..+|+++|||+|+||||+|
T Consensus       164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~q  243 (356)
T 1gp6_A          164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH  243 (356)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEE
Confidence            99988      89999999999999999999999999987   4678899999999999888999999999999999999


Q ss_pred             CCCCCceeeeCCcEEEccCCCCeEEEEeCchhhhhhcCcccCccceeecCCCCCeEEEEEeecCCCCC-eEecCcCccCc
Q 020127          227 DDVPGLQVLRKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDA-VIAPAKDLIDE  305 (330)
Q Consensus       227 d~~~GLqv~~~g~W~~V~p~~g~lvVniGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~pl~~~~~~  305 (330)
                      |+++||||+++|+|++|+|.||++|||+||+||+||||+||||.|||+.+++++|||++||++|+.|+ +|+|+++|+++
T Consensus       244 d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~  323 (356)
T 1gp6_A          244 NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSV  323 (356)
T ss_dssp             CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCS
T ss_pred             cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCC
Confidence            99999999999999999999999999999999999999999999999988888999999999999999 99999999999


Q ss_pred             CCcccc
Q 020127          306 RHPAKF  311 (330)
Q Consensus       306 ~~p~~~  311 (330)
                      ++|+.|
T Consensus       324 ~~p~~y  329 (356)
T 1gp6_A          324 ESPAKF  329 (356)
T ss_dssp             SSCCSS
T ss_pred             CCCccC
Confidence            888743
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 330
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 2e-67
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 9e-62
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 3e-55
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 8e-47
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  213 bits (542), Expect = 2e-67
 Identities = 96/317 (30%), Positives = 158/317 (49%), Gaps = 20/317 (6%)

Query: 15  STVKSVPSNYIRPISDRPNLTEVQISDGS-----IPLIDLQVLDGP---RRLDIIKQIGQ 66
           S + S+P  YIRP  +  ++ +V + +       +P IDL+ ++      R + I+++ +
Sbjct: 12  SGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKK 71

Query: 67  ACQHDGFFQVKNHGIPETIINSMLSITRAFFKLPESERLKSYSDDPSKSTR-LSTSFNVN 125
           A    G   + NHGIP  ++  +      FF L   E+ K  +D  +   +   +    N
Sbjct: 72  ASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANN 131

Query: 126 TEKVSNWRDYLRLHCYPLQDYIHEWPSNPPSFRY-------NYARGLVLRLLEAISESLG 178
                 W DY     YP +          PS             R L  ++ +A+S  LG
Sbjct: 132 ASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLG 191

Query: 179 LQRDYIDKALGKHRQH---MALNYYPHCPQPDLTYGLPGHIDPNLITVLLQDDVPGLQVL 235
           L+ D ++K +G   +    M +NYYP CPQP+L  G+  H D + +T +L + VPGLQ+ 
Sbjct: 192 LEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF 251

Query: 236 RKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAV 295
            +GKW+    +P++ ++ IGD +++LSN +YKS+LHR LVN +K RIS   F  P  D +
Sbjct: 252 YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKI 311

Query: 296 I-APAKDLIDERHPAKF 311
           +  P  +++    PAKF
Sbjct: 312 VLKPLPEMVSVESPAKF 328
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query330
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 92.41
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 83.61
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.4e-72  Score=532.84  Aligned_cols=302  Identities=33%  Similarity=0.640  Sum_probs=260.5

Q ss_pred             HHhhhhh-ccCCCCCcccCCCCCCCCCccC------CCCCCCCceEeCCCCCCC---cHHHHHHHHHHHhhcccEEEEEc
Q 020127            9 LLSDLAS-TVKSVPSNYIRPISDRPNLTEV------QISDGSIPLIDLQVLDGP---RRLDIIKQIGQACQHDGFFQVKN   78 (330)
Q Consensus         9 ~~~~~~~-~~~~~p~~~~~p~~~~~~~~~~------~~~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~Gff~l~n   78 (330)
                      -|++|++ .+.+||+.|++|+.++++....      .+. .+||||||+.|.++   .++.++++|.+||+++|||||+|
T Consensus         5 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~n   83 (349)
T d1gp6a_           5 RVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDG-PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN   83 (349)
T ss_dssp             CHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCS-CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred             chHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCC-CCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEc
Confidence            3788885 5899999999999999875322      234 68999999999865   46789999999999999999999


Q ss_pred             cCCCHHHHHHHHHHHHHhhCCCHHHHcccccCCC-CCceecccccccCCCCcccccccccccccCCCc-cCCCCCCCCCc
Q 020127           79 HGIPETIINSMLSITRAFFKLPESERLKSYSDDP-SKSTRLSTSFNVNTEKVSNWRDYLRLHCYPLQD-YIHEWPSNPPS  156 (330)
Q Consensus        79 hGi~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~GY~~~~~~~~~~~~d~~E~~~~~~~p~~~-~~~~wP~~~~~  156 (330)
                      |||+.++++++++++++||+||.|+|+++..... +.+.||+...........++.+.+.....+... .+|.||..++.
T Consensus        84 HGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~~  163 (349)
T d1gp6a_          84 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSD  163 (349)
T ss_dssp             CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTT
T ss_pred             cCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccch
Confidence            9999999999999999999999999999976543 234556544444444556666655433333322 27899999889


Q ss_pred             hhHH------HHHHHHHHHHHHHHHHcCCChHHHHHHhcC---cccceEEeecCCCCCCCCCCCcccccCCCcEEEEeeC
Q 020127          157 FRYN------YARGLVLRLLEAISESLGLQRDYIDKALGK---HRQHMALNYYPHCPQPDLTYGLPGHIDPNLITVLLQD  227 (330)
Q Consensus       157 fr~~------~~~~la~~ll~~la~~Lgl~~~~f~~~~~~---~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd  227 (330)
                      |++.      .|.+++.+|+++++++||+++++|.+.+..   ..+.||++|||+++.++..+|+++|||+|+||||+|+
T Consensus       164 f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~  243 (349)
T d1gp6a_         164 YIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN  243 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEecc
Confidence            9877      899999999999999999999999988743   5568999999999998889999999999999999999


Q ss_pred             CCCCceeeeCCcEEEccCCCCeEEEEeCchhhhhhcCcccCccceeecCCCCCeEEEEEeecCCCCCeE-ecCcCccCcC
Q 020127          228 DVPGLQVLRKGKWLPVNPIPNTFIVKIGDQMQVLSNDRYKSVLHRALVNCDKERISIPTFYCPSPDAVI-APAKDLIDER  306 (330)
Q Consensus       228 ~~~GLqv~~~g~W~~V~p~~g~lvVniGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i-~pl~~~~~~~  306 (330)
                      .++||||+++|+|++|+|.+|++|||+||+||+||||+||||+|||+.+++++||||+||++|+.|++| +|+|+|++++
T Consensus       244 ~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~  323 (349)
T d1gp6a_         244 MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVE  323 (349)
T ss_dssp             SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSS
T ss_pred             CCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCCC
Confidence            999999999999999999999999999999999999999999999999888999999999999999865 8999999999


Q ss_pred             Ccccc
Q 020127          307 HPAKF  311 (330)
Q Consensus       307 ~p~~~  311 (330)
                      +|+.|
T Consensus       324 ~p~~y  328 (349)
T d1gp6a_         324 SPAKF  328 (349)
T ss_dssp             SCCSS
T ss_pred             CCCCC
Confidence            98744
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure