Citrus Sinensis ID: 020158
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 330 | 2.2.26 [Sep-21-2011] | |||||||
| Q8R1C6 | 393 | Methyltransferase-like pr | yes | no | 0.672 | 0.564 | 0.362 | 9e-33 | |
| Q9BUU2 | 404 | Methyltransferase-like pr | yes | no | 0.654 | 0.534 | 0.354 | 1e-32 | |
| P40389 | 303 | Rapid response to glucose | yes | no | 0.457 | 0.498 | 0.307 | 4e-06 | |
| O14118 | 289 | Uncharacterized protein C | no | no | 0.436 | 0.498 | 0.267 | 4e-06 | |
| A4FV98 | 226 | Protein-lysine methyltran | no | no | 0.484 | 0.707 | 0.280 | 5e-06 | |
| Q28IN4 | 224 | Protein-lysine methyltran | no | no | 0.403 | 0.593 | 0.298 | 1e-05 | |
| Q96AZ1 | 226 | Protein-lysine methyltran | no | no | 0.451 | 0.659 | 0.291 | 3e-05 | |
| Q3UZW7 | 335 | Protein FAM86A OS=Mus mus | no | no | 0.390 | 0.385 | 0.294 | 3e-05 | |
| Q1JPJ9 | 340 | Protein FAM86A OS=Bos tau | no | no | 0.542 | 0.526 | 0.266 | 8e-05 | |
| P30643 | 371 | Uncharacterized protein R | yes | no | 0.445 | 0.396 | 0.271 | 0.0002 |
| >sp|Q8R1C6|MET22_MOUSE Methyltransferase-like protein 22 OS=Mus musculus GN=Mettl22 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 140 bits (354), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 139/251 (55%), Gaps = 29/251 (11%)
Query: 81 VTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSR 140
+ I+H + + + VG QVW+ L+LAD+++ + F G LELGAGTGLA I+ +
Sbjct: 158 IKIEHTMATPLEDVGKQVWRGALLLADYILFR---RDLFQGCTVLELGAGTGLASIVAAT 214
Query: 141 VAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGS-VHVRDLNWMNPWPPIFSLGNSSASQ 199
+A TV+ TD G +L C +NV LNS + + G V V++L+W+ + +
Sbjct: 215 MAHTVYCTDVGTDLLAMCQRNVALNSHLTATGGGVVKVKELDWLKD-------NLCTDPK 267
Query: 200 ERYSWNSSELKEV-QRASVLLAADVIYSDDLTDALFHTLKRLM-PLGSKKVLYLALEKRY 257
+SW+ E+ ++ +VLLAA+V Y DDLT+ALF+TL RL+ L + ++EKR+
Sbjct: 268 APFSWSEEEIADLYDHTTVLLAAEVFYDDDLTNALFNTLSRLVHRLKNACTAIFSVEKRF 327
Query: 258 NFSLNDLDVVANGYSHFRSYI-----MEEGEHRRFERESFPAFVGKCIDLNEFPQYVREY 312
NF+L LDV Y HFR+ + + +G RF E A FPQ + Y
Sbjct: 328 NFTLRHLDVTCEAYDHFRASLDSLEKLADG-RLRFMVEPVEA---------SFPQLLV-Y 376
Query: 313 DRGNDVELWQI 323
+R +ELW+I
Sbjct: 377 ERIRQLELWKI 387
|
Probable methyltransferase. Mus musculus (taxid: 10090) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q9BUU2|MET22_HUMAN Methyltransferase-like protein 22 OS=Homo sapiens GN=METTL22 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 142/257 (55%), Gaps = 41/257 (15%)
Query: 81 VTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSR 140
+ I+H + + + VG QVW+ L+LAD+++ + F G +LELGAGTGLA I+ +
Sbjct: 169 IRIEHTMATPLEDVGKQVWRGALLLADYILFR---QDLFRGCTALELGAGTGLASIIAAT 225
Query: 141 VAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGS-VHVRDLNWM------NPWPPIFSLG 193
+A TV+ TD G +L C +N+ LNS + + G V V++L+W+ +P P
Sbjct: 226 MARTVYCTDVGADLLSMCQRNIALNSHLAATGGGIVRVKELDWLKDDLCTDPKVP----- 280
Query: 194 NSSASQERYSWNSSELKEV-QRASVLLAADVIYSDDLTDALFHTLKRLM-PLGSKKVLYL 251
+SW+ E+ ++ ++L AA+V Y DDLTDA+F TL RL L + L
Sbjct: 281 --------FSWSQEEISDLYDHTTILFAAEVFYDDDLTDAVFKTLSRLAHRLKNACTAIL 332
Query: 252 ALEKRYNFSLNDLDVVANGYSHFRSYI-----MEEGEHRRFERESFPAFVGKCIDLNEFP 306
++EKR NF+L LDV Y HFRS + + +G+ R FV + ++ + FP
Sbjct: 333 SVEKRLNFTLRHLDVTCEAYDHFRSCLHALEQLADGKLR---------FVVEPVEAS-FP 382
Query: 307 QYVREYDRGNDVELWQI 323
Q + Y+R +ELW+I
Sbjct: 383 QLLV-YERLQQLELWKI 398
|
Probable methyltransferase. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P40389|RRG1_SCHPO Rapid response to glucose protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrg1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 64 GDLVLPRRSKQSTRCFNVTI-QHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDF-NG 121
G L P R ++ + V++ T ++G + W + A + + D N
Sbjct: 81 GRLAAPTRKREFSLSNGVSVVLREPTMTYNTLGFKTWGS----APLLSANLPKWEDLSNS 136
Query: 122 IISLELGAGTGLAGILLS-RVAWTVFLTDHGNYILDNCAKNVQLNSGVF-SHQGSVHVRD 179
I +LELGAGTGL GI + ++ W V TD + I++N NV NS + + GSV
Sbjct: 137 INALELGAGTGLVGISAAIQLGWQVVCTDLPD-IVENMQYNVDYNSELIQQYAGSVSCHV 195
Query: 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD---DLTDALFH 235
L+WMNP R SW +K QR ++A+D IY +L ALF
Sbjct: 196 LDWMNP----------PDDDNRPSWL---IKPFQR---IIASDCIYETHFGELAIALFR 238
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|O14118|YEZ3_SCHPO Uncharacterized protein C3A11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3A11.03 PE=4 SV=3 | Back alignment and function description |
|---|
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 39/183 (21%)
Query: 93 SVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGN 152
+ G + W+A + LA+++ S G+ LELGAGTGL IL +++ V TD
Sbjct: 119 TTGARTWEAGMALAEYIYQHPVQS----GMRVLELGAGTGLVSILCAKMGSIVLATDGDT 174
Query: 153 YILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEV 212
+ D +N +LN+ ++V+ L W PP FS
Sbjct: 175 KVCDGVRENARLNN------CDINVKKLLWGVD-PPEFS--------------------- 206
Query: 213 QRASVLLAADVIYSDDLTDALFHTLKRLMPL--GSKKVLYLALEKRYNFSLNDLDVVANG 270
++ A+DV Y DL L TL +++ + K +L +L ++ F N L ++ N
Sbjct: 207 ---DIVFASDVTYDCDLR-CLATTLTQIITINPNCKIILSASLRRQETF-FNFLKLIQNL 261
Query: 271 YSH 273
Y+
Sbjct: 262 YAR 264
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|A4FV98|MT21B_BOVIN Protein-lysine methyltransferase METTL21B OS=Bos taurus GN=METTL21B PE=2 SV=1 | Back alignment and function description |
|---|
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 43/203 (21%)
Query: 65 DLVLPRR--------SKQSTRCFN---VTIQHNITSLIPSVGLQVWKAELVLADFVMHKM 113
D V PR S++S CF + I N S + V +VW A L L ++ +
Sbjct: 13 DSVFPREVGLFADCYSEKSRFCFCGHVLNITENFGSRL-GVAARVWDAALSLCNYFESQ- 70
Query: 114 CTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQG 173
+ DF G +ELGAGTG+ GIL + V +TD +L+ NVQ N G
Sbjct: 71 --NVDFRGKKVIELGAGTGIVGILAALQGGDVTITDL-PLVLEQIQGNVQAN---VPPGG 124
Query: 174 SVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDAL 233
VR L+W Q + + ++L AD++Y + L
Sbjct: 125 RAQVRALSW-------------GIDQHVFPGDY---------DLVLGADIVYLEPTFPLL 162
Query: 234 FHTLKRLMPLGSKKVLYLALEKR 256
TL+ L G +YLA + R
Sbjct: 163 LGTLRHLC--GPHGTIYLASKMR 183
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Probable methyltransferase. Bos taurus (taxid: 9913) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q28IN4|MT21B_XENTR Protein-lysine methyltransferase METTL21B OS=Xenopus tropicalis GN=mettl21b PE=2 SV=1 | Back alignment and function description |
|---|
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 70/164 (42%), Gaps = 31/164 (18%)
Query: 93 SVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGN 152
V VW A L L + + DF G +ELGAGTG+ GIL+S + V LTD
Sbjct: 52 GVAAPVWDAALFLCGYFEEQ---KLDFKGKKVIELGAGTGIVGILVSLLGGHVTLTDL-P 107
Query: 153 YILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEV 212
+ L KNV N ++ NP P + +L SW + K
Sbjct: 108 HALSQIQKNVSAN--------------VSSNNP-PQVCAL----------SWGLDQEKFP 142
Query: 213 QRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKR 256
Q +L AD++Y D L TL+ L G + ++L+ + R
Sbjct: 143 QDYDFVLGADIVYLHDTYPLLIQTLQYLC--GPQTSIFLSSKMR 184
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Probable methyltransferase. Xenopus tropicalis (taxid: 8364) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q96AZ1|MT21B_HUMAN Protein-lysine methyltransferase METTL21B OS=Homo sapiens GN=METTL21B PE=2 SV=1 | Back alignment and function description |
|---|
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 43/192 (22%)
Query: 72 SKQSTRCFN---VTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELG 128
S++S CF +TI N S + V +VW A L L ++ + + DF G +ELG
Sbjct: 28 SEKSQFCFCGHVLTITQNFGSRL-GVAARVWDAALSLCNYFESQ---NVDFRGKKVIELG 83
Query: 129 AGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW---MNP 185
AGTG+ GIL + V +TD L+ NVQ N G VR L+W +
Sbjct: 84 AGTGIVGILAALQGGDVTITDL-PLALEQIQGNVQAN---VPAGGQAQVRALSWGIDHHV 139
Query: 186 WPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLM-PLG 244
+P + L +L AD++Y + L TL+ L P G
Sbjct: 140 FPANYDL-------------------------VLGADIVYLEPTFPLLLGTLQHLCRPHG 174
Query: 245 SKKVLYLALEKR 256
+ +YLA + R
Sbjct: 175 T---IYLASKMR 183
|
Probable methyltransferase. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q3UZW7|FA86A_MOUSE Protein FAM86A OS=Mus musculus GN=Fam86a PE=2 SV=1 | Back alignment and function description |
|---|
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 93 SVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW--TVFLTDH 150
+ GL W A L LA++ + + F LELG+G GL G+ + + +D
Sbjct: 133 TTGLVTWDAALYLAEWAIEN---PAAFTDRTILELGSGAGLTGLAICKACCPRAYIFSDC 189
Query: 151 GNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWN---SS 207
+L+ NV LN FS + P PI G+S + + W+ +S
Sbjct: 190 HAQVLEQLRGNVLLNG--FS------------LEPHTPI-DAGSSKVTVAQLDWDEVTAS 234
Query: 208 ELKEVQRASVLLAADVIYSDDLTDALFHTLKRL 240
+L Q A V++AADV+Y ++T +L LK L
Sbjct: 235 QLSAFQ-ADVVIAADVLYCWEMTLSLVRVLKML 266
|
Mus musculus (taxid: 10090) |
| >sp|Q1JPJ9|FA86A_BOVIN Protein FAM86A OS=Bos taurus GN=FAM86A PE=2 SV=2 | Back alignment and function description |
|---|
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 43 NELFEAEAAASVREVLTLDDDG----DLVLPRRSKQSTRCFNVTIQHNITSLIPSVGLQV 98
+EL++A A EVLT +D +LP T C + I + T+ GL
Sbjct: 90 DELYQALA-----EVLTAEDPTHCHRSYLLPS-GDSVTLCESTAIVSHGTT-----GLVT 138
Query: 99 WKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILD 156
W A L LA++ + + F + LELG+G GL G+ + + +D +++L+
Sbjct: 139 WNAALYLAEWAVEN---PAVFAHRMVLELGSGAGLTGLAICKTCRPRAYIFSDCHSHVLE 195
Query: 157 NCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQ--R 214
NV LN FS + S+ D +P P + R W++ ++ +
Sbjct: 196 QLRGNVLLNG--FSLEPSI---DTWAQHPGPHTPEAERPWVTVARLDWDTVTAPQLAAFQ 250
Query: 215 ASVLLAADVIYSDDLTDALFHTLKRL 240
V+LAADV+Y + +L L++L
Sbjct: 251 PDVVLAADVLYCPETVLSLVGVLRKL 276
|
Bos taurus (taxid: 9913) |
| >sp|P30643|YNE4_CAEEL Uncharacterized protein R08D7.4 OS=Caenorhabditis elegans GN=R08D7.4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 48/195 (24%)
Query: 56 EVLTLDDDGDLVLPRRSKQSTRCFNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCT 115
E + L D GD VL + S+ + + + GL VW+A LA+
Sbjct: 137 ERVYLTDGGDKVLAKFSEAVNQLS-----------MGTTGLSVWQASCDLANLFR---LI 182
Query: 116 SSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLN--------S 166
S++N I LELG+G G++GI ++++ V LTD+ + +L+ +N+ N S
Sbjct: 183 PSEYNRI--LELGSGCGVSGIAIAKMNDCCVTLTDYDDNVLNLLEENIAKNDLKSDTEDS 240
Query: 167 GVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS 226
++Q + VR LNW + ++ SE KE +++AADV+Y
Sbjct: 241 SANNNQAT--VRSLNWCD-------------------FDFSEWKE--PTDLIIAADVVYD 277
Query: 227 DDLTDALFHTLKRLM 241
L +L + L L+
Sbjct: 278 TALLASLCNVLNLLL 292
|
Caenorhabditis elegans (taxid: 6239) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 330 | ||||||
| 224059058 | 339 | predicted protein [Populus trichocarpa] | 0.948 | 0.923 | 0.654 | 1e-116 | |
| 297743282 | 339 | unnamed protein product [Vitis vinifera] | 0.957 | 0.932 | 0.638 | 1e-115 | |
| 255550040 | 344 | conserved hypothetical protein [Ricinus | 0.957 | 0.918 | 0.656 | 1e-112 | |
| 359482604 | 315 | PREDICTED: methyltransferase-like protei | 0.915 | 0.958 | 0.643 | 1e-111 | |
| 357454975 | 347 | hypothetical protein MTR_2g102040 [Medic | 0.969 | 0.922 | 0.595 | 1e-105 | |
| 240254407 | 312 | Putative methyltransferase family protei | 0.909 | 0.961 | 0.529 | 1e-90 | |
| 413943582 | 358 | hypothetical protein ZEAMMB73_544621 [Ze | 0.987 | 0.910 | 0.485 | 2e-85 | |
| 413943583 | 359 | hypothetical protein ZEAMMB73_544621 [Ze | 0.987 | 0.908 | 0.483 | 3e-85 | |
| 222635952 | 528 | hypothetical protein OsJ_22104 [Oryza sa | 0.969 | 0.606 | 0.508 | 1e-83 | |
| 115469120 | 352 | Os06g0639300 [Oryza sativa Japonica Grou | 0.969 | 0.909 | 0.508 | 1e-83 |
| >gi|224059058|ref|XP_002299696.1| predicted protein [Populus trichocarpa] gi|222846954|gb|EEE84501.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/318 (65%), Positives = 254/318 (79%), Gaps = 5/318 (1%)
Query: 9 VMSEVHVGCPPHSSGPHISRFTISLPPEVEPSRYNELFEAEAAASVREVLTLDDDGDLVL 68
VMSEVH+GCPP SSGPHIS FTIS+PP V+ R+N LF+ E + +++ +D+DGDL+L
Sbjct: 10 VMSEVHLGCPPGSSGPHISHFTISIPPGVDCGRFNNLFKDEQVP-MHQMVCVDEDGDLIL 68
Query: 69 PRRSKQ---STRCFNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISL 125
RR TR F+VTIQHNITS I +VGLQVWKAEL+L+DFV+HKM TSSDF+ I+SL
Sbjct: 69 TRRHAHHYLPTRSFSVTIQHNITSSISNVGLQVWKAELLLSDFVLHKMLTSSDFDEIVSL 128
Query: 126 ELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185
ELGAGTGL G+LL+ VA TVFLTD G+ ILDNCA NV LNS V ++QGS+HVR+L+WM
Sbjct: 129 ELGAGTGLVGMLLAHVAKTVFLTDRGDEILDNCASNVDLNSEVLNYQGSIHVRELDWMGS 188
Query: 186 WPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245
WPP S GNS+ + YSW SS ++E +RA++L+AADVIYSDDLTDALF L++LM L
Sbjct: 189 WPPSTSSGNSTC-HKSYSWTSSNVEEAERAALLVAADVIYSDDLTDALFCVLEKLMSLSP 247
Query: 246 KKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPAFVGKCIDLNEF 305
KKVLYLALEKRYNFSL+DLDVVANGYSHFRSY+ + ++ + S P FVGKC+DL+
Sbjct: 248 KKVLYLALEKRYNFSLDDLDVVANGYSHFRSYLRGQEDYDNLKHGSSPCFVGKCLDLSLI 307
Query: 306 PQYVREYDRGNDVELWQI 323
PQYVREY+RGNDVELWQI
Sbjct: 308 PQYVREYERGNDVELWQI 325
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743282|emb|CBI36149.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/324 (63%), Positives = 254/324 (78%), Gaps = 8/324 (2%)
Query: 2 DGEDSSEVMSEVHVGCPPHSSGPHISRFTISLPPE-VEPSRYNELFEAEAAASVREVLTL 60
D E+ +VMSEVH+GCPP SGPHIS+FTISLPP+ E R E A S ++ + L
Sbjct: 12 DLEEHEQVMSEVHLGCPPGLSGPHISKFTISLPPQGAESIRQGE------AVSTQQNIEL 65
Query: 61 DDDGDLVLPRRSKQSTRCFNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFN 120
D+DGDLV+ RR++QS R + IQHNITS IP+VGLQVW+AEL+L+DFV+HK+ TSS+F
Sbjct: 66 DEDGDLVVKRRNRQSNRSCCLIIQHNITSSIPNVGLQVWRAELILSDFVLHKIHTSSEFE 125
Query: 121 GIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDL 180
GI+SLELGAGTG+ GI+L+ VA VF+TDHG+ ILDNCA NV LNS +F+HQ SV+VR L
Sbjct: 126 GIVSLELGAGTGMVGIILACVAKRVFITDHGDEILDNCANNVHLNSEMFNHQASVYVRGL 185
Query: 181 NWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRL 240
NW N WPP SS +Q+R+SW +SE++EVQ AS+LLAADVIYSDDLTDA F+TL+RL
Sbjct: 186 NWKNSWPPTMD-SESSETQKRFSWTASEVEEVQGASLLLAADVIYSDDLTDAFFNTLERL 244
Query: 241 MPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPAFVGKCI 300
M GS+KVLYLALEKRYNFSL+DLDVVANGY F+SY+ + E E E P FVGK I
Sbjct: 245 MSQGSEKVLYLALEKRYNFSLDDLDVVANGYLRFQSYLRDAEECESLEHEPLPRFVGKPI 304
Query: 301 DLNEFPQYVREYDRGNDVELWQIK 324
DL + PQYVREY+RGND+E+WQIK
Sbjct: 305 DLTQIPQYVREYNRGNDIEIWQIK 328
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255550040|ref|XP_002516071.1| conserved hypothetical protein [Ricinus communis] gi|223544976|gb|EEF46491.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/320 (65%), Positives = 249/320 (77%), Gaps = 4/320 (1%)
Query: 8 EVMSEVHVGCPPHSSGPHISRFTISLPPEVEPSRYNELFEAEAAASVREVLTLDDDGDLV 67
+VMSE+H+GCPP+SSGPH S FTIS+PP+V+ R + F+ E + ++L +D+DGDLV
Sbjct: 13 QVMSEIHLGCPPNSSGPHTSNFTISIPPDVDHGRCKDFFKDEEVTTRDQMLCVDEDGDLV 72
Query: 68 LPRRSKQSTRCFNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLEL 127
L RRSK TR F+VTIQHNITS IPSVGLQVWKAELVL+DFV+HKM TSS+F+GI LEL
Sbjct: 73 LTRRSKSPTRSFSVTIQHNITSSIPSVGLQVWKAELVLSDFVLHKMFTSSEFDGISLLEL 132
Query: 128 GAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWP 187
GAGTGL G+LL+ VA VFLTD G+ IL+NCA+NVQLNS V + + ++HVR+L+WMN WP
Sbjct: 133 GAGTGLVGMLLAHVAKVVFLTDRGDEILENCARNVQLNSEVLNCRSAIHVRELDWMNSWP 192
Query: 188 PIFSLGNSSASQ---ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244
PI GN + RYSW +E++E Q S+LLAADVIYSDDLTDALF L LMPLG
Sbjct: 193 PIEHCGNLAGPMSVISRYSWIPAEIEEAQGVSLLLAADVIYSDDLTDALFSILGTLMPLG 252
Query: 245 SKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPAFVGKCIDLNE 304
S+KVLYLALEKRYNFSL+DLDVVANGY HF SY+ EE S P FVGK IDL+
Sbjct: 253 SEKVLYLALEKRYNFSLDDLDVVANGYKHFLSYLKEEEYEELEYGSS-PCFVGKRIDLSL 311
Query: 305 FPQYVREYDRGNDVELWQIK 324
PQYVR YDRGNDVELWQIK
Sbjct: 312 IPQYVRGYDRGNDVELWQIK 331
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359482604|ref|XP_002279614.2| PREDICTED: methyltransferase-like protein 22-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/317 (64%), Positives = 251/317 (79%), Gaps = 15/317 (4%)
Query: 10 MSEVHVGCPPHSSGPHISRFTISLPPE-VEPSRYNELFEAEAAASVREVLTLDDDGDLVL 68
MSEVH+GCPP SGPHIS+FTISLPP+ E R E A S ++ + LD+DGDLV+
Sbjct: 1 MSEVHLGCPPGLSGPHISKFTISLPPQGAESIRQGE------AVSTQQNIELDEDGDLVV 54
Query: 69 PRRSKQSTRCFNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELG 128
RR++QS R + IQHNITS IP+VGLQVW+AEL+L+DFV+HK+ TSS+F GI+SLELG
Sbjct: 55 KRRNRQSNRSCCLIIQHNITSSIPNVGLQVWRAELILSDFVLHKIHTSSEFEGIVSLELG 114
Query: 129 AGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPP 188
AGTG+ GI+L+ VA VF+TDHG+ ILDNCA NV LNS +F+HQ SV+VR LNW N WPP
Sbjct: 115 AGTGMVGIILACVAKRVFITDHGDEILDNCANNVHLNSEMFNHQASVYVRGLNWKNSWPP 174
Query: 189 IFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKV 248
SS +Q+R+SW +SE++EVQ AS+LLAADVIYSDDLTDA F+TL+RLM GS+KV
Sbjct: 175 TMD-SESSETQKRFSWTASEVEEVQGASLLLAADVIYSDDLTDAFFNTLERLMSQGSEKV 233
Query: 249 LYLALEKRYNFSLNDLDVVANGYSHFRSYIME-EGEHRRFERESFPAFVGKCIDLNEFPQ 307
LYLALEKRYNFSL+DLDVVANGY F+SY+ + EG+H S +FVGK IDL + PQ
Sbjct: 234 LYLALEKRYNFSLDDLDVVANGYLRFQSYLRDAEGKH------SSASFVGKPIDLTQIPQ 287
Query: 308 YVREYDRGNDVELWQIK 324
YVREY+RGND+E+WQIK
Sbjct: 288 YVREYNRGNDIEIWQIK 304
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357454975|ref|XP_003597768.1| hypothetical protein MTR_2g102040 [Medicago truncatula] gi|355486816|gb|AES68019.1| hypothetical protein MTR_2g102040 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/326 (59%), Positives = 243/326 (74%), Gaps = 6/326 (1%)
Query: 2 DGEDSSEVMSEVHVGCPPHSSGPHISRFTISLPPEVEPSRYNELFEAEAAASVREVLTLD 61
DG D EVMSEVH+GCPP SGPHISRFTISLP + + +E + ++L D
Sbjct: 12 DGGDE-EVMSEVHLGCPPRFSGPHISRFTISLPLLHDVDHIKHILSSENESLETQILEFD 70
Query: 62 DDGDLVLPRRSKQSTRCFN---VTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSD 118
DGDL+LPRR+ S+ C N V IQHNITS IP+VGLQVW+AELVL DF++HK SS+
Sbjct: 71 QDGDLLLPRRTSISS-CKNSYCVRIQHNITSSIPNVGLQVWRAELVLTDFILHKALCSSE 129
Query: 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVR 178
F+G+I+LELGAGTGL G+LL+R A +VF+TD GN ILDNC KNVQLN G+ ++ ++ VR
Sbjct: 130 FHGVIALELGAGTGLVGLLLARTANSVFVTDRGNQILDNCVKNVQLNRGLLNNPATIFVR 189
Query: 179 DLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLK 238
DL+W + WPP + +S +Q RYSW S E+++ + AS+LLAADVIYSDDLTDA F TL+
Sbjct: 190 DLDWFDSWPPKARVEEASHTQ-RYSWTSREIEDAENASLLLAADVIYSDDLTDAFFSTLE 248
Query: 239 RLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPAFVGK 298
RLM GS KVLY+ALEKRYNFS +DLDVVANGYSHFRSY+ + FE P FVGK
Sbjct: 249 RLMSRGSAKVLYMALEKRYNFSFSDLDVVANGYSHFRSYLRDVDAVESFESACIPNFVGK 308
Query: 299 CIDLNEFPQYVREYDRGNDVELWQIK 324
D+++ PQYV+EY+R +DVE+WQIK
Sbjct: 309 QTDISQIPQYVKEYERTHDVEIWQIK 334
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|240254407|ref|NP_683510.4| Putative methyltransferase family protein [Arabidopsis thaliana] gi|332198203|gb|AEE36324.1| Putative methyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/325 (52%), Positives = 226/325 (69%), Gaps = 25/325 (7%)
Query: 1 MDGEDSSEVMSEVHVGCPPHSSG-PHISRFTISLPPEVEPSRYNELFEAEAAASVREVLT 59
M+ + EVMSE+H+GCPP ++ P +SRFT S P ++
Sbjct: 1 MEEDSEIEVMSEIHLGCPPAATDDPFLSRFTFSFPSNT--------------------VS 40
Query: 60 LDDDGDLVLPRRSKQSTRCFNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDF 119
+D DGDL+LPRR+ + F VTIQH+ITS + VGLQVWKA+LVL++FV+HK+CTSSDF
Sbjct: 41 VDKDGDLLLPRRNYPTGPSFTVTIQHSITSNLRHVGLQVWKAQLVLSEFVLHKICTSSDF 100
Query: 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179
+GI+ LELGAGTGL GILL+RVA +FLTDHG+ IL NC KN++LNS +F V+VR+
Sbjct: 101 HGIVCLELGAGTGLLGILLARVAKAIFLTDHGDEILGNCGKNLELNSSLFHPHTVVNVRE 160
Query: 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKR 239
LNWM+ WP + S Y WN + + V+ +S + AADVIYSDDLT ALF L+R
Sbjct: 161 LNWMSDWPIQDTHALSPLFMSSYCWNKQDFELVKCSSFIFAADVIYSDDLTIALFSMLRR 220
Query: 240 LMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPAFVGKC 299
+M G KVLYL LEKRYNFSL+DL+VVANGY+ FRSY+ E+G ++ +R +FVGK
Sbjct: 221 VMSFGCDKVLYLGLEKRYNFSLDDLNVVANGYTCFRSYVKEDGIGKQEKR----SFVGKR 276
Query: 300 IDLNEFPQYVREYDRGNDVELWQIK 324
ID+ + P Y+++YDRG DVELW+IK
Sbjct: 277 IDVTQIPHYLKDYDRGEDVELWEIK 301
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|413943582|gb|AFW76231.1| hypothetical protein ZEAMMB73_544621 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/340 (48%), Positives = 227/340 (66%), Gaps = 14/340 (4%)
Query: 3 GEDSSEVMSEVHVGCPPHSSGPHISRFTISLPP--------EVEPSRYNELFEAEAAAS- 53
G + +VMSEVH+GCPPH SG +S F+ S P +EL A + +
Sbjct: 7 GAEDEQVMSEVHLGCPPHFSGLLVSHFSFSSRPLGPYGHKGGGGGGGGSELVAATSGSGD 66
Query: 54 VREVLTLDDDGDLVLPRRSKQSTRCFN---VTIQHNITSLIPSVGLQVWKAELVLADFVM 110
+ + +D+DGDLVL RR + + TIQH +TS + SVGLQVWKA L+L+DF++
Sbjct: 67 SPDAVAVDEDGDLVLDRRRRNKYARGDRHLFTIQHGVTSSLKSVGLQVWKAALLLSDFIL 126
Query: 111 HKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFS 170
H+ +S +F+G+ ++E+GAGTGL G+ L+RVA +F+TD G ILDNC N+ +NSG+
Sbjct: 127 HESFSSPNFDGVTAIEIGAGTGLVGLALARVARRIFVTDRGTDILDNCLANLHINSGMLR 186
Query: 171 H-QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDL 229
+ V VR+L+W WPP + S RY W++SE++E ++A+VL AADVIYSDDL
Sbjct: 187 FDEAKVCVRELDWKMAWPPPVGTYDPS-DPSRYLWSASEVEEAEKATVLFAADVIYSDDL 245
Query: 230 TDALFHTLKRLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFER 289
T+ F+T+K+LM +G+KKVLYLALEKRYNFS+++LDVVANGY+HFRS+ + EH
Sbjct: 246 TNLFFNTVKKLMSVGAKKVLYLALEKRYNFSVDELDVVANGYTHFRSFFTAQDEHGDPSN 305
Query: 290 ESFPAFVGKCIDLNEFPQYVREYDRGNDVELWQIKRSENE 329
S P FVGK ID E PQY+REY+RG D+E+W I S E
Sbjct: 306 RSGPGFVGKQIDPAEIPQYIREYERGKDLEMWMIMYSPEE 345
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|413943583|gb|AFW76232.1| hypothetical protein ZEAMMB73_544621 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/341 (48%), Positives = 227/341 (66%), Gaps = 15/341 (4%)
Query: 3 GEDSSEVMSEVHVGCPPHSSGPHISRFTISLPP--------EVEPSRYNELFEAEAAAS- 53
G + +VMSEVH+GCPPH SG +S F+ S P +EL A + +
Sbjct: 7 GAEDEQVMSEVHLGCPPHFSGLLVSHFSFSSRPLGPYGHKGGGGGGGGSELVAATSGSGG 66
Query: 54 -VREVLTLDDDGDLVLPRRSKQSTRCFN---VTIQHNITSLIPSVGLQVWKAELVLADFV 109
+ + +D+DGDLVL RR + + TIQH +TS + SVGLQVWKA L+L+DF+
Sbjct: 67 DSPDAVAVDEDGDLVLDRRRRNKYARGDRHLFTIQHGVTSSLKSVGLQVWKAALLLSDFI 126
Query: 110 MHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVF 169
+H+ +S +F+G+ ++E+GAGTGL G+ L+RVA +F+TD G ILDNC N+ +NSG+
Sbjct: 127 LHESFSSPNFDGVTAIEIGAGTGLVGLALARVARRIFVTDRGTDILDNCLANLHINSGML 186
Query: 170 SH-QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD 228
+ V VR+L+W WPP + S RY W++SE++E ++A+VL AADVIYSDD
Sbjct: 187 RFDEAKVCVRELDWKMAWPPPVGTYDPS-DPSRYLWSASEVEEAEKATVLFAADVIYSDD 245
Query: 229 LTDALFHTLKRLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFE 288
LT+ F+T+K+LM +G+KKVLYLALEKRYNFS+++LDVVANGY+HFRS+ + EH
Sbjct: 246 LTNLFFNTVKKLMSVGAKKVLYLALEKRYNFSVDELDVVANGYTHFRSFFTAQDEHGDPS 305
Query: 289 RESFPAFVGKCIDLNEFPQYVREYDRGNDVELWQIKRSENE 329
S P FVGK ID E PQY+REY+RG D+E+W I S E
Sbjct: 306 NRSGPGFVGKQIDPAEIPQYIREYERGKDLEMWMIMYSPEE 346
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|222635952|gb|EEE66084.1| hypothetical protein OsJ_22104 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/334 (50%), Positives = 227/334 (67%), Gaps = 14/334 (4%)
Query: 8 EVMSEVHVGCPPHSSGPHISRFTISLPPEVEPSRYNELFEA-----EAAASVR-----EV 57
+VMSEVH+GCPP SG ++SRF+ S P + PS ++ E + AAS +
Sbjct: 194 QVMSEVHLGCPPRFSGLYVSRFSFSSRP-LGPSAGSDGGECSGVREQVAASSSSCGSPDA 252
Query: 58 LTLDDDGDLVLPRRSKQSTRCFNV-TIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTS 116
+T+D+DGDLVL RR + R +V T+QH ITS + SVGLQVWKA L+L DFV+HK TS
Sbjct: 253 VTVDEDGDLVLDRRRRNRGRSDHVLTVQHGITSSLRSVGLQVWKAALLLTDFVLHKSFTS 312
Query: 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFS-HQGSV 175
S+FNG+ ++E+GAGTGL G+ L+RVA +F+TD G+ ILDNC NVQLNS + +
Sbjct: 313 SEFNGVTAIEIGAGTGLVGLALARVAKKIFITDRGSDILDNCLANVQLNSSMLKFDEAKA 372
Query: 176 HVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFH 235
VR+L+W WPP +SS +Y W +SE++ ++A+ L AADVIYSDDLTD F
Sbjct: 373 CVRELDWKMSWPPPVFKCDSSDPSSKYLWYTSEIEAAEKATTLFAADVIYSDDLTDLFFS 432
Query: 236 TLKRLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESF-PA 294
K+LM G++KVLYL LEKRYNFS+++LDVVANGY HFRS+ + E + S P
Sbjct: 433 IAKKLMSHGAEKVLYLTLEKRYNFSMDELDVVANGYKHFRSFFTVQDESGALDDNSCRPD 492
Query: 295 FVGKCIDLNEFPQYVREYDRGNDVELWQIKRSEN 328
FVG+ +DL E PQY+REYDRG D+E+W+I + N
Sbjct: 493 FVGEQMDLAEVPQYIREYDRGKDLEMWKIMYNPN 526
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115469120|ref|NP_001058159.1| Os06g0639300 [Oryza sativa Japonica Group] gi|51535589|dbj|BAD37533.1| unknown protein [Oryza sativa Japonica Group] gi|51536354|dbj|BAD37485.1| unknown protein [Oryza sativa Japonica Group] gi|113596199|dbj|BAF20073.1| Os06g0639300 [Oryza sativa Japonica Group] gi|215766079|dbj|BAG98307.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/334 (50%), Positives = 227/334 (67%), Gaps = 14/334 (4%)
Query: 8 EVMSEVHVGCPPHSSGPHISRFTISLPPEVEPSRYNELFEA-----EAAASVR-----EV 57
+VMSEVH+GCPP SG ++SRF+ S P + PS ++ E + AAS +
Sbjct: 18 QVMSEVHLGCPPRFSGLYVSRFSFSSRP-LGPSAGSDGGECSGVREQVAASSSSCGSPDA 76
Query: 58 LTLDDDGDLVLPRRSKQSTRCFNV-TIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTS 116
+T+D+DGDLVL RR + R +V T+QH ITS + SVGLQVWKA L+L DFV+HK TS
Sbjct: 77 VTVDEDGDLVLDRRRRNRGRSDHVLTVQHGITSSLRSVGLQVWKAALLLTDFVLHKSFTS 136
Query: 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSH-QGSV 175
S+FNG+ ++E+GAGTGL G+ L+RVA +F+TD G+ ILDNC NVQLNS + +
Sbjct: 137 SEFNGVTAIEIGAGTGLVGLALARVAKKIFITDRGSDILDNCLANVQLNSSMLKFDEAKA 196
Query: 176 HVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFH 235
VR+L+W WPP +SS +Y W +SE++ ++A+ L AADVIYSDDLTD F
Sbjct: 197 CVRELDWKMSWPPPVFKCDSSDPSSKYLWYTSEIEAAEKATTLFAADVIYSDDLTDLFFS 256
Query: 236 TLKRLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESF-PA 294
K+LM G++KVLYL LEKRYNFS+++LDVVANGY HFRS+ + E + S P
Sbjct: 257 IAKKLMSHGAEKVLYLTLEKRYNFSMDELDVVANGYKHFRSFFTVQDESGALDDNSCRPD 316
Query: 295 FVGKCIDLNEFPQYVREYDRGNDVELWQIKRSEN 328
FVG+ +DL E PQY+REYDRG D+E+W+I + N
Sbjct: 317 FVGEQMDLAEVPQYIREYDRGKDLEMWKIMYNPN 350
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 330 | ||||||
| TAIR|locus:504956295 | 312 | AT1G79915 "AT1G79915" [Arabido | 0.763 | 0.807 | 0.527 | 1.6e-75 | |
| UNIPROTKB|Q9BUU2 | 404 | METTL22 "Methyltransferase-lik | 0.681 | 0.556 | 0.314 | 3.2e-28 | |
| ZFIN|ZDB-GENE-081022-70 | 403 | zgc:194177 "zgc:194177" [Danio | 0.687 | 0.563 | 0.321 | 8.2e-28 | |
| MGI|MGI:2384301 | 393 | Mettl22 "methyltransferase lik | 0.681 | 0.572 | 0.318 | 6.6e-26 | |
| FB|FBgn0037045 | 274 | CG10584 [Drosophila melanogast | 0.336 | 0.405 | 0.366 | 1.6e-13 |
| TAIR|locus:504956295 AT1G79915 "AT1G79915" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 681 (244.8 bits), Expect = 1.6e-75, Sum P(2) = 1.6e-75
Identities = 135/256 (52%), Positives = 178/256 (69%)
Query: 69 PRRSKQSTRCFNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISXXXX 128
PRR+ + F VTIQH+ITS + VGLQVWKA+LVL++FV+HK+CTSSDF+GI+
Sbjct: 50 PRRNYPTGPSFTVTIQHSITSNLRHVGLQVWKAQLVLSEFVLHKICTSSDFHGIVCLELG 109
Query: 129 XXXXXXXXXXSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPP 188
+RVA +FLTDHG+ IL NC KN++LNS +F V+VR+LNWM+ WP
Sbjct: 110 AGTGLLGILLARVAKAIFLTDHGDEILGNCGKNLELNSSLFHPHTVVNVRELNWMSDWPI 169
Query: 189 IFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKV 248
+ S Y WN + + V+ +S + AADVIYSDDLT ALF L+R+M G KV
Sbjct: 170 QDTHALSPLFMSSYCWNKQDFELVKCSSFIFAADVIYSDDLTIALFSMLRRVMSFGCDKV 229
Query: 249 LYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPAFVGKCIDLNEFPQY 308
LYL LEKRYNFSL+DL+VVANGY+ FRSY+ E+G ++ +R +FVGK ID+ + P Y
Sbjct: 230 LYLGLEKRYNFSLDDLNVVANGYTCFRSYVKEDGIGKQEKR----SFVGKRIDVTQIPHY 285
Query: 309 VREYDRGNDVELWQIK 324
+++YDRG DVELW+IK
Sbjct: 286 LKDYDRGEDVELWEIK 301
|
|
| UNIPROTKB|Q9BUU2 METTL22 "Methyltransferase-like protein 22" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 78/248 (31%), Positives = 129/248 (52%)
Query: 81 VTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISXXXXXXXXXXXXXXSR 140
+ I+H + + + VG QVW+ L+LAD+++ + F G + +
Sbjct: 169 IRIEHTMATPLEDVGKQVWRGALLLADYILFRQDL---FRGCTALELGAGTGLASIIAAT 225
Query: 141 VAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGS-VHVRDLNWMNPWPPIFSLGNSSASQ 199
+A TV+ TD G +L C +N+ LNS + + G V V++L+W+ L + +
Sbjct: 226 MARTVYCTDVGADLLSMCQRNIALNSHLAATGGGIVRVKELDWLKD-----DL--CTDPK 278
Query: 200 ERYSWNSSELKEV-QRASVLLAADVIYSDDLTDALFHTLKRLMP-LGSKKVLYLALEKRY 257
+SW+ E+ ++ ++L AA+V Y DDLTDA+F TL RL L + L++EKR
Sbjct: 279 VPFSWSQEEISDLYDHTTILFAAEVFYDDDLTDAVFKTLSRLAHRLKNACTAILSVEKRL 338
Query: 258 NFSLNDLDVVANGYSHFRS--YIMEEGEHRRFERESFPAFVGKCIDLNEFPQYVREYDRG 315
NF+L LDV Y HFRS + +E+ + FV + ++ + FPQ + Y+R
Sbjct: 339 NFTLRHLDVTCEAYDHFRSCLHALEQLADGKLR------FVVEPVEAS-FPQLL-VYERL 390
Query: 316 NDVELWQI 323
+ELW+I
Sbjct: 391 QQLELWKI 398
|
|
| ZFIN|ZDB-GENE-081022-70 zgc:194177 "zgc:194177" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 79/246 (32%), Positives = 128/246 (52%)
Query: 81 VTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISXXXXXXXXXXXXXXSR 140
+ I+H + + + VG Q+W+ +LADF++ + SS F G +
Sbjct: 168 IIIEHTMATPLEDVGKQIWRGAFLLADFILAQ---SSMFKGATVLELGAGTGLTSIVMAM 224
Query: 141 VAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGS-VHVRDLNWMNPWPPIFSLGNSSASQ 199
VA TV+ TD G +L+ C +NV +N F Q S + VR L+WM F + A
Sbjct: 225 VAKTVYCTDVGEDLLNMCQRNVTVNKQHFEPQESEIMVRQLDWM---ADDFC---TDADL 278
Query: 200 ERYSWNSSELKEVQ-RASVLLAADVIYSDDLTDALFHTLKRLMP-LGSKKVLYLALEKRY 257
E +SW E+ ++ + ++AADV Y DDLTDALF T+ RL + Y+++EKR
Sbjct: 279 E-FSWTDIEVADLHDNTTFVIAADVCYDDDLTDALFRTIYRLSSNMRKPSTAYISIEKRL 337
Query: 258 NFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPAFVGKCIDLNEFPQYVREYDRGND 317
NF+L +DV Y HFR + +++ + + + +F + K FPQ+ +Y+R
Sbjct: 338 NFTLQHMDVSCEAYDHFR-HCLDQLQQMKDGKMNFKVELVKI----SFPQFF-QYERVEQ 391
Query: 318 VELWQI 323
+ELW++
Sbjct: 392 LELWKV 397
|
|
| MGI|MGI:2384301 Mettl22 "methyltransferase like 22" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 79/248 (31%), Positives = 131/248 (52%)
Query: 81 VTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISXXXXXXXXXXXXXXSR 140
+ I+H + + + VG QVW+ L+LAD+++ + F G +
Sbjct: 158 IKIEHTMATPLEDVGKQVWRGALLLADYILFRRDL---FQGCTVLELGAGTGLASIVAAT 214
Query: 141 VAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSV-HVRDLNWMNPWPPIFSLGNSSASQ 199
+A TV+ TD G +L C +NV LNS + + G V V++L+W+ +L +
Sbjct: 215 MAHTVYCTDVGTDLLAMCQRNVALNSHLTATGGGVVKVKELDWLKD-----NLCTDPKAP 269
Query: 200 ERYSWNSSELKEV-QRASVLLAADVIYSDDLTDALFHTLKRLMP-LGSKKVLYLALEKRY 257
+SW+ E+ ++ +VLLAA+V Y DDLT+ALF+TL RL+ L + ++EKR+
Sbjct: 270 --FSWSEEEIADLYDHTTVLLAAEVFYDDDLTNALFNTLSRLVHRLKNACTAIFSVEKRF 327
Query: 258 NFSLNDLDVVANGYSHFRSYI--MEEGEHRRFERESFPAFVGKCIDLNEFPQYVREYDRG 315
NF+L LDV Y HFR+ + +E+ R F+ + ++ + FPQ + Y+R
Sbjct: 328 NFTLRHLDVTCEAYDHFRASLDSLEKLADGRLR------FMVEPVEAS-FPQLL-VYERI 379
Query: 316 NDVELWQI 323
+ELW+I
Sbjct: 380 RQLELWKI 387
|
|
| FB|FBgn0037045 CG10584 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 160 (61.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 48/131 (36%), Positives = 70/131 (53%)
Query: 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK----KVLYLA 252
AS+E +S + L+ + + ++LAADVIY D LTDA L L+ G + K +Y+A
Sbjct: 157 ASKEDHSQDL--LEAIDNSDIILAADVIYCDTLTDAFICVLDNLLDRGRQTGRPKTIYMA 214
Query: 253 LEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPAFVGKCIDLNEFPQYVREY 312
LEKRY F+L D D VA Y Y++ + ++ + E P +FPQY EY
Sbjct: 215 LEKRYVFTLEDCDSVAPMYE----YLIRQTVNKPWIMEHLPL---------DFPQYF-EY 260
Query: 313 DRGNDVELWQI 323
DR + L +I
Sbjct: 261 DRCKQLVLMKI 271
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 330 | |||
| pfam10294 | 170 | pfam10294, Methyltransf_16, Putative methyltransfe | 2e-17 |
| >gnl|CDD|220679 pfam10294, Methyltransf_16, Putative methyltransferase | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 2e-17
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 29/169 (17%)
Query: 93 SVGLQVWKAELVLADFVMHKMCT-SSDFNGIISLELGAGTGLAGILLSRVAWT--VFLTD 149
+G VW A +VL+ ++ K+ ++ +G+ LELG+GTGL GI ++ + V +TD
Sbjct: 16 GIGGHVWDAAVVLSKYLEMKITPGGNNLSGLNVLELGSGTGLVGIAVALLLPGASVTITD 75
Query: 150 HGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSEL 209
++ KN++LN V + L+W P
Sbjct: 76 LEE-AIELMKKNIELN----GLSSKVTAKVLDWGEDLPDDVFDP---------------- 114
Query: 210 KEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKRYN 258
++LAAD +Y++D L TL L+ G + V+ +A +KR
Sbjct: 115 ---HPVDLILAADCVYNEDSFPLLEKTLNDLL--GKETVILVAYKKRRE 158
|
Length = 170 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 330 | |||
| PF10294 | 173 | Methyltransf_16: Putative methyltransferase; Inter | 99.96 | |
| KOG3201 | 201 | consensus Uncharacterized conserved protein [Funct | 99.78 | |
| KOG2793 | 248 | consensus Putative N2,N2-dimethylguanosine tRNA me | 99.74 | |
| COG3897 | 218 | Predicted methyltransferase [General function pred | 99.73 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 99.44 | |
| PF05175 | 170 | MTS: Methyltransferase small domain; InterPro: IPR | 99.44 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 99.4 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 99.36 | |
| PLN02396 | 322 | hexaprenyldihydroxybenzoate methyltransferase | 99.33 | |
| KOG1270 | 282 | consensus Methyltransferases [Coenzyme transport a | 99.33 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 99.32 | |
| COG4123 | 248 | Predicted O-methyltransferase [General function pr | 99.32 | |
| PF13847 | 152 | Methyltransf_31: Methyltransferase domain; PDB: 3T | 99.3 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 99.26 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 99.25 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 99.23 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 99.23 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 99.19 | |
| PF08241 | 95 | Methyltransf_11: Methyltransferase domain; InterPr | 99.19 | |
| PLN02585 | 315 | magnesium protoporphyrin IX methyltransferase | 99.19 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 99.17 | |
| TIGR00138 | 181 | gidB 16S rRNA methyltransferase GidB. GidB (glucos | 99.16 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 99.16 | |
| TIGR00452 | 314 | methyltransferase, putative. Known examples to dat | 99.15 | |
| COG4976 | 287 | Predicted methyltransferase (contains TPR repeat) | 99.15 | |
| PRK12335 | 287 | tellurite resistance protein TehB; Provisional | 99.15 | |
| PRK15068 | 322 | tRNA mo(5)U34 methyltransferase; Provisional | 99.15 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 99.13 | |
| PRK15001 | 378 | SAM-dependent 23S ribosomal RNA mG1835 methyltrans | 99.13 | |
| PF13489 | 161 | Methyltransf_23: Methyltransferase domain; PDB: 3J | 99.13 | |
| PF05401 | 201 | NodS: Nodulation protein S (NodS); InterPro: IPR00 | 99.12 | |
| KOG2920 | 282 | consensus Predicted methyltransferase [General fun | 99.11 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 99.11 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 99.11 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 99.1 | |
| PF08242 | 99 | Methyltransf_12: Methyltransferase domain; InterPr | 99.08 | |
| PF01209 | 233 | Ubie_methyltran: ubiE/COQ5 methyltransferase famil | 99.07 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 99.07 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 99.07 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 99.07 | |
| COG2813 | 300 | RsmC 16S RNA G1207 methylase RsmC [Translation, ri | 99.06 | |
| PRK05134 | 233 | bifunctional 3-demethylubiquinone-9 3-methyltransf | 99.06 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 99.05 | |
| PF13659 | 117 | Methyltransf_26: Methyltransferase domain; PDB: 3G | 99.05 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 99.05 | |
| TIGR02021 | 219 | BchM-ChlM magnesium protoporphyrin O-methyltransfe | 99.05 | |
| PRK09489 | 342 | rsmC 16S ribosomal RNA m2G1207 methyltransferase; | 99.05 | |
| TIGR02752 | 231 | MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me | 99.04 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 99.04 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 99.03 | |
| PLN02233 | 261 | ubiquinone biosynthesis methyltransferase | 99.03 | |
| COG2890 | 280 | HemK Methylase of polypeptide chain release factor | 99.03 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 99.02 | |
| smart00828 | 224 | PKS_MT Methyltransferase in polyketide synthase (P | 99.0 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 99.0 | |
| PF13649 | 101 | Methyltransf_25: Methyltransferase domain; PDB: 3B | 98.99 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 98.98 | |
| TIGR03587 | 204 | Pse_Me-ase pseudaminic acid biosynthesis-associate | 98.98 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 98.98 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 98.98 | |
| PRK07580 | 230 | Mg-protoporphyrin IX methyl transferase; Validated | 98.98 | |
| PRK00216 | 239 | ubiE ubiquinone/menaquinone biosynthesis methyltra | 98.97 | |
| PRK10909 | 199 | rsmD 16S rRNA m(2)G966-methyltransferase; Provisio | 98.97 | |
| PRK15451 | 247 | tRNA cmo(5)U34 methyltransferase; Provisional | 98.97 | |
| PF03848 | 192 | TehB: Tellurite resistance protein TehB; InterPro: | 98.97 | |
| PLN02490 | 340 | MPBQ/MSBQ methyltransferase | 98.95 | |
| TIGR02072 | 240 | BioC biotin biosynthesis protein BioC. This enzyme | 98.94 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 98.93 | |
| TIGR01983 | 224 | UbiG ubiquinone biosynthesis O-methyltransferase. | 98.93 | |
| TIGR00740 | 239 | methyltransferase, putative. A simple BLAST search | 98.93 | |
| TIGR03533 | 284 | L3_gln_methyl protein-(glutamine-N5) methyltransfe | 98.92 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 98.92 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 98.91 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 98.91 | |
| PRK00121 | 202 | trmB tRNA (guanine-N(7)-)-methyltransferase; Revie | 98.88 | |
| PRK13168 | 443 | rumA 23S rRNA m(5)U1939 methyltransferase; Reviewe | 98.88 | |
| PRK11805 | 307 | N5-glutamine S-adenosyl-L-methionine-dependent met | 98.87 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 98.86 | |
| TIGR00536 | 284 | hemK_fam HemK family putative methylases. The gene | 98.85 | |
| PRK05785 | 226 | hypothetical protein; Provisional | 98.85 | |
| PRK14966 | 423 | unknown domain/N5-glutamine S-adenosyl-L-methionin | 98.85 | |
| TIGR03534 | 251 | RF_mod_PrmC protein-(glutamine-N5) methyltransfera | 98.85 | |
| TIGR03704 | 251 | PrmC_rel_meth putative protein-(glutamine-N5) meth | 98.85 | |
| KOG1499 | 346 | consensus Protein arginine N-methyltransferase PRM | 98.85 | |
| TIGR00095 | 189 | RNA methyltransferase, RsmD family. This model rep | 98.84 | |
| PF08003 | 315 | Methyltransf_9: Protein of unknown function (DUF16 | 98.83 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 98.83 | |
| PRK15128 | 396 | 23S rRNA m(5)C1962 methyltransferase; Provisional | 98.82 | |
| PRK04266 | 226 | fibrillarin; Provisional | 98.81 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 98.81 | |
| PRK11783 | 702 | rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi | 98.78 | |
| PRK09328 | 275 | N5-glutamine S-adenosyl-L-methionine-dependent met | 98.77 | |
| TIGR01934 | 223 | MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis | 98.77 | |
| TIGR02716 | 306 | C20_methyl_CrtF C-20 methyltransferase BchU. Membe | 98.77 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 98.75 | |
| PRK03522 | 315 | rumB 23S rRNA methyluridine methyltransferase; Rev | 98.75 | |
| KOG2497 | 262 | consensus Predicted methyltransferase [General fun | 98.75 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 98.74 | |
| PRK06202 | 232 | hypothetical protein; Provisional | 98.74 | |
| cd02440 | 107 | AdoMet_MTases S-adenosylmethionine-dependent methy | 98.74 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 98.73 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 98.72 | |
| PLN02336 | 475 | phosphoethanolamine N-methyltransferase | 98.71 | |
| TIGR01177 | 329 | conserved hypothetical protein TIGR01177. This fam | 98.67 | |
| smart00138 | 264 | MeTrc Methyltransferase, chemotaxis proteins. Meth | 98.67 | |
| TIGR02085 | 374 | meth_trns_rumB 23S rRNA (uracil-5-)-methyltransfer | 98.67 | |
| TIGR00091 | 194 | tRNA (guanine-N(7)-)-methyltransferase. In E. coli | 98.67 | |
| TIGR00478 | 228 | tly hemolysin TlyA family protein. Hemolysins are | 98.67 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 98.66 | |
| PRK06922 | 677 | hypothetical protein; Provisional | 98.65 | |
| PHA03411 | 279 | putative methyltransferase; Provisional | 98.64 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 98.63 | |
| smart00650 | 169 | rADc Ribosomal RNA adenine dimethylases. | 98.63 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 98.63 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 98.62 | |
| TIGR00479 | 431 | rumA 23S rRNA (uracil-5-)-methyltransferase RumA. | 98.6 | |
| PTZ00146 | 293 | fibrillarin; Provisional | 98.58 | |
| PLN02672 | 1082 | methionine S-methyltransferase | 98.57 | |
| TIGR02143 | 353 | trmA_only tRNA (uracil-5-)-methyltransferase. This | 98.57 | |
| KOG3010 | 261 | consensus Methyltransferase [General function pred | 98.56 | |
| PRK11727 | 321 | 23S rRNA mA1618 methyltransferase; Provisional | 98.53 | |
| PRK05031 | 362 | tRNA (uracil-5-)-methyltransferase; Validated | 98.53 | |
| PRK14904 | 445 | 16S rRNA methyltransferase B; Provisional | 98.51 | |
| TIGR02081 | 194 | metW methionine biosynthesis protein MetW. This pr | 98.5 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 98.49 | |
| KOG2904 | 328 | consensus Predicted methyltransferase [General fun | 98.49 | |
| PF07021 | 193 | MetW: Methionine biosynthesis protein MetW; InterP | 98.49 | |
| KOG3191 | 209 | consensus Predicted N6-DNA-methyltransferase [Tran | 98.47 | |
| PRK14902 | 444 | 16S rRNA methyltransferase B; Provisional | 98.46 | |
| PRK10901 | 427 | 16S rRNA methyltransferase B; Provisional | 98.46 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 98.46 | |
| KOG4300 | 252 | consensus Predicted methyltransferase [General fun | 98.45 | |
| PHA03412 | 241 | putative methyltransferase; Provisional | 98.45 | |
| TIGR03438 | 301 | probable methyltransferase. This model represents | 98.43 | |
| PRK04338 | 382 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 98.4 | |
| PRK11088 | 272 | rrmA 23S rRNA methyltransferase A; Provisional | 98.4 | |
| TIGR00563 | 426 | rsmB ribosomal RNA small subunit methyltransferase | 98.39 | |
| PRK14896 | 258 | ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 | 98.39 | |
| PRK14121 | 390 | tRNA (guanine-N(7)-)-methyltransferase; Provisiona | 98.39 | |
| TIGR00446 | 264 | nop2p NOL1/NOP2/sun family putative RNA methylase. | 98.38 | |
| PRK14901 | 434 | 16S rRNA methyltransferase B; Provisional | 98.38 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 98.36 | |
| KOG1271 | 227 | consensus Methyltransferases [General function pre | 98.36 | |
| KOG1500 | 517 | consensus Protein arginine N-methyltransferase CAR | 98.36 | |
| COG4106 | 257 | Tam Trans-aconitate methyltransferase [General fun | 98.35 | |
| PRK11188 | 209 | rrmJ 23S rRNA methyltransferase J; Provisional | 98.34 | |
| PRK14903 | 431 | 16S rRNA methyltransferase B; Provisional | 98.33 | |
| COG4122 | 219 | Predicted O-methyltransferase [General function pr | 98.33 | |
| PTZ00338 | 294 | dimethyladenosine transferase-like protein; Provis | 98.32 | |
| PLN02476 | 278 | O-methyltransferase | 98.32 | |
| PF05219 | 265 | DREV: DREV methyltransferase; InterPro: IPR007884 | 98.31 | |
| PRK00274 | 272 | ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 | 98.3 | |
| PF01596 | 205 | Methyltransf_3: O-methyltransferase; InterPro: IPR | 98.28 | |
| PF03602 | 183 | Cons_hypoth95: Conserved hypothetical protein 95; | 98.25 | |
| PF06080 | 204 | DUF938: Protein of unknown function (DUF938); Inte | 98.23 | |
| KOG1540 | 296 | consensus Ubiquinone biosynthesis methyltransferas | 98.22 | |
| PF02475 | 200 | Met_10: Met-10+ like-protein; InterPro: IPR003402 | 98.22 | |
| KOG1541 | 270 | consensus Predicted protein carboxyl methylase [Ge | 98.21 | |
| COG1092 | 393 | Predicted SAM-dependent methyltransferases [Genera | 98.2 | |
| PF05185 | 448 | PRMT5: PRMT5 arginine-N-methyltransferase; InterPr | 98.18 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 98.18 | |
| KOG3420 | 185 | consensus Predicted RNA methylase [Translation, ri | 98.18 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 98.18 | |
| TIGR00755 | 253 | ksgA dimethyladenosine transferase. Alternate name | 98.17 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 98.16 | |
| PF00891 | 241 | Methyltransf_2: O-methyltransferase; InterPro: IPR | 98.13 | |
| TIGR00308 | 374 | TRM1 tRNA(guanine-26,N2-N2) methyltransferase. Thi | 98.12 | |
| COG2265 | 432 | TrmA SAM-dependent methyltransferases related to t | 98.08 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 98.08 | |
| PLN02589 | 247 | caffeoyl-CoA O-methyltransferase | 98.05 | |
| PRK13256 | 226 | thiopurine S-methyltransferase; Reviewed | 98.01 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 98.0 | |
| PRK03612 | 521 | spermidine synthase; Provisional | 97.98 | |
| PLN02366 | 308 | spermidine synthase | 97.91 | |
| PF05724 | 218 | TPMT: Thiopurine S-methyltransferase (TPMT); Inter | 97.89 | |
| PF10672 | 286 | Methyltrans_SAM: S-adenosylmethionine-dependent me | 97.87 | |
| COG4076 | 252 | Predicted RNA methylase [General function predicti | 97.81 | |
| KOG2187 | 534 | consensus tRNA uracil-5-methyltransferase and rela | 97.76 | |
| KOG2899 | 288 | consensus Predicted methyltransferase [General fun | 97.74 | |
| PF05971 | 299 | Methyltransf_10: Protein of unknown function (DUF8 | 97.74 | |
| PF08704 | 247 | GCD14: tRNA methyltransferase complex GCD14 subuni | 97.68 | |
| COG0742 | 187 | N6-adenine-specific methylase [DNA replication, re | 97.67 | |
| PF05958 | 352 | tRNA_U5-meth_tr: tRNA (Uracil-5-)-methyltransferas | 97.66 | |
| KOG2361 | 264 | consensus Predicted methyltransferase [General fun | 97.66 | |
| PF09445 | 163 | Methyltransf_15: RNA cap guanine-N2 methyltransfer | 97.63 | |
| TIGR01444 | 143 | fkbM_fam methyltransferase, FkbM family. Members o | 97.62 | |
| COG3963 | 194 | Phospholipid N-methyltransferase [Lipid metabolism | 97.58 | |
| COG2520 | 341 | Predicted methyltransferase [General function pred | 97.56 | |
| PLN02823 | 336 | spermine synthase | 97.54 | |
| PF01861 | 243 | DUF43: Protein of unknown function DUF43; InterPro | 97.42 | |
| PF09243 | 274 | Rsm22: Mitochondrial small ribosomal subunit Rsm22 | 97.34 | |
| PF00398 | 262 | RrnaAD: Ribosomal RNA adenine dimethylase; InterPr | 97.27 | |
| PF02527 | 184 | GidB: rRNA small subunit methyltransferase G; Inte | 97.26 | |
| PF01739 | 196 | CheR: CheR methyltransferase, SAM binding domain; | 97.26 | |
| KOG0820 | 315 | consensus Ribosomal RNA adenine dimethylase [RNA p | 97.26 | |
| PRK00536 | 262 | speE spermidine synthase; Provisional | 97.24 | |
| PF01170 | 179 | UPF0020: Putative RNA methylase family UPF0020; In | 97.21 | |
| COG0030 | 259 | KsgA Dimethyladenosine transferase (rRNA methylati | 97.18 | |
| PRK11783 | 702 | rlmL 23S rRNA m(2)G2445 methyltransferase; Provisi | 97.13 | |
| COG0357 | 215 | GidB Predicted S-adenosylmethionine-dependent meth | 97.12 | |
| PRK10611 | 287 | chemotaxis methyltransferase CheR; Provisional | 97.1 | |
| COG1352 | 268 | CheR Methylase of chemotaxis methyl-accepting prot | 97.02 | |
| PF02390 | 195 | Methyltransf_4: Putative methyltransferase ; Inter | 96.98 | |
| PF05891 | 218 | Methyltransf_PK: AdoMet dependent proline di-methy | 96.94 | |
| PF03291 | 331 | Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 | 96.93 | |
| PF08123 | 205 | DOT1: Histone methylation protein DOT1 ; InterPro: | 96.93 | |
| PF04816 | 205 | DUF633: Family of unknown function (DUF633) ; Inte | 96.92 | |
| PRK11760 | 357 | putative 23S rRNA C2498 ribose 2'-O-ribose methylt | 96.9 | |
| KOG2940 | 325 | consensus Predicted methyltransferase [General fun | 96.9 | |
| KOG3987 | 288 | consensus Uncharacterized conserved protein DREV/C | 96.84 | |
| PF13679 | 141 | Methyltransf_32: Methyltransferase domain | 96.82 | |
| PRK11933 | 470 | yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; | 96.8 | |
| PHA01634 | 156 | hypothetical protein | 96.77 | |
| KOG1501 | 636 | consensus Arginine N-methyltransferase [General fu | 96.75 | |
| PF02384 | 311 | N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 T | 96.71 | |
| KOG1661 | 237 | consensus Protein-L-isoaspartate(D-aspartate) O-me | 96.61 | |
| TIGR02987 | 524 | met_A_Alw26 type II restriction m6 adenine DNA met | 96.57 | |
| COG2521 | 287 | Predicted archaeal methyltransferase [General func | 96.56 | |
| PF01269 | 229 | Fibrillarin: Fibrillarin; InterPro: IPR000692 Fibr | 96.56 | |
| PLN02232 | 160 | ubiquinone biosynthesis methyltransferase | 96.55 | |
| PF01564 | 246 | Spermine_synth: Spermine/spermidine synthase; Inte | 96.36 | |
| COG1189 | 245 | Predicted rRNA methylase [Translation, ribosomal s | 96.32 | |
| COG0500 | 257 | SmtA SAM-dependent methyltransferases [Secondary m | 96.12 | |
| COG1041 | 347 | Predicted DNA modification methylase [DNA replicat | 96.05 | |
| KOG1709 | 271 | consensus Guanidinoacetate methyltransferase and r | 96.0 | |
| PRK00050 | 296 | 16S rRNA m(4)C1402 methyltranserfase; Provisional | 95.99 | |
| KOG1663 | 237 | consensus O-methyltransferase [Secondary metabolit | 95.72 | |
| PF01234 | 256 | NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: I | 95.68 | |
| COG0421 | 282 | SpeE Spermidine synthase [Amino acid transport and | 95.44 | |
| COG0220 | 227 | Predicted S-adenosylmethionine-dependent methyltra | 95.32 | |
| COG1568 | 354 | Predicted methyltransferases [General function pre | 95.31 | |
| COG0116 | 381 | Predicted N6-adenine-specific DNA methylase [DNA r | 95.23 | |
| PF03059 | 276 | NAS: Nicotianamine synthase protein; InterPro: IPR | 94.9 | |
| KOG2078 | 495 | consensus tRNA modification enzyme [RNA processing | 94.69 | |
| PF07942 | 270 | N2227: N2227-like protein; InterPro: IPR012901 Thi | 94.42 | |
| COG0144 | 355 | Sun tRNA and rRNA cytosine-C5-methylases [Translat | 94.42 | |
| PRK01544 | 506 | bifunctional N5-glutamine S-adenosyl-L-methionine- | 94.34 | |
| PRK10742 | 250 | putative methyltransferase; Provisional | 94.32 | |
| KOG3045 | 325 | consensus Predicted RNA methylase involved in rRNA | 94.29 | |
| COG2384 | 226 | Predicted SAM-dependent methyltransferase [General | 94.22 | |
| PF12147 | 311 | Methyltransf_20: Putative methyltransferase; Inter | 94.11 | |
| PF05148 | 219 | Methyltransf_8: Hypothetical methyltransferase; In | 93.94 | |
| COG1255 | 129 | Uncharacterized protein conserved in archaea [Func | 93.85 | |
| COG1889 | 231 | NOP1 Fibrillarin-like rRNA methylase [Translation, | 93.81 | |
| TIGR03439 | 319 | methyl_EasF probable methyltransferase domain, Eas | 93.77 | |
| PF02005 | 377 | TRM: N2,N2-dimethylguanosine tRNA methyltransferas | 93.75 | |
| KOG1975 | 389 | consensus mRNA cap methyltransferase [RNA processi | 93.67 | |
| COG3129 | 292 | Predicted SAM-dependent methyltransferase [General | 93.41 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 93.28 | |
| PF01728 | 181 | FtsJ: FtsJ-like methyltransferase; InterPro: IPR00 | 93.2 | |
| PF11968 | 219 | DUF3321: Putative methyltransferase (DUF3321); Int | 93.03 | |
| PF07091 | 251 | FmrO: Ribosomal RNA methyltransferase (FmrO); PDB: | 92.9 | |
| PF03141 | 506 | Methyltransf_29: Putative S-adenosyl-L-methionine- | 92.47 | |
| KOG2915 | 314 | consensus tRNA(1-methyladenosine) methyltransferas | 92.43 | |
| PF03686 | 127 | UPF0146: Uncharacterised protein family (UPF0146); | 92.07 | |
| COG1867 | 380 | TRM1 N2,N2-dimethylguanosine tRNA methyltransferas | 91.58 | |
| KOG2730 | 263 | consensus Methylase [General function prediction o | 91.31 | |
| PF11599 | 246 | AviRa: RRNA methyltransferase AviRa; InterPro: IPR | 90.89 | |
| COG5459 | 484 | Predicted rRNA methylase [Translation, ribosomal s | 90.86 | |
| COG4262 | 508 | Predicted spermidine synthase with an N-terminal m | 89.65 | |
| PF01555 | 231 | N6_N4_Mtase: DNA methylase; InterPro: IPR002941 Th | 89.22 | |
| PRK11524 | 284 | putative methyltransferase; Provisional | 88.38 | |
| PF01189 | 283 | Nol1_Nop2_Fmu: NOL1/NOP2/sun family; InterPro: IPR | 87.65 | |
| COG1565 | 370 | Uncharacterized conserved protein [Function unknow | 87.36 | |
| PRK13699 | 227 | putative methylase; Provisional | 87.34 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 87.07 | |
| COG0293 | 205 | FtsJ 23S rRNA methylase [Translation, ribosomal st | 86.4 | |
| PF07757 | 112 | AdoMet_MTase: Predicted AdoMet-dependent methyltra | 86.28 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 86.04 | |
| KOG2352 | 482 | consensus Predicted spermine/spermidine synthase [ | 85.49 | |
| KOG1227 | 351 | consensus Putative methyltransferase [General func | 84.84 | |
| cd00315 | 275 | Cyt_C5_DNA_methylase Cytosine-C5 specific DNA meth | 84.11 | |
| KOG2671 | 421 | consensus Putative RNA methylase [Replication, rec | 83.75 | |
| PF02636 | 252 | Methyltransf_28: Putative S-adenosyl-L-methionine- | 83.53 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 81.64 | |
| KOG3178 | 342 | consensus Hydroxyindole-O-methyltransferase and re | 81.2 | |
| PF04672 | 267 | Methyltransf_19: S-adenosyl methyltransferase; Int | 80.57 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 80.39 |
| >PF10294 Methyltransf_16: Putative methyltransferase; InterPro: IPR019410 There are a number of unidentified genes that have a high probability of coding for methyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-30 Score=222.18 Aligned_cols=153 Identities=37% Similarity=0.591 Sum_probs=97.0
Q ss_pred eEEEecccccCCCCcCeEeechHHHHHHHHhhhcC---CCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHH
Q 020158 80 NVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMC---TSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYI 154 (330)
Q Consensus 80 ~i~i~~~~~t~~~~~G~~vW~aa~~La~~l~~~~~---~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~ 154 (330)
.+.|.+.. ..++|.++|+||++|++||..+.. .+..+++++|||||||+|++||++|+. +.+|++||+++ +
T Consensus 5 ~l~i~e~~---~~~~G~~vW~aa~~La~~l~~~~~~~~~~~~~~~~~VLELGaG~Gl~gi~~a~~~~~~~Vv~TD~~~-~ 80 (173)
T PF10294_consen 5 TLQIEEDW---GDGTGGKVWPAALVLARYLLSHSESEFNPELFRGKRVLELGAGTGLPGIAAAKLFGAARVVLTDYNE-V 80 (173)
T ss_dssp ---------------------HHHHHHHHHHH-------GGGTTTSEEEETT-TTSHHHHHHHHT-T-SEEEEEE-S--H
T ss_pred cccccccc---ccCCcEEEechHHHHHHHHHHhcccccchhhcCCceEEEECCccchhHHHHHhccCCceEEEeccch-h
Confidence 45555543 248899999999999999998531 136789999999999999999999999 78999999997 9
Q ss_pred HHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHH
Q 020158 155 LDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALF 234 (330)
Q Consensus 155 L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~ 234 (330)
+++++.|++.|.... ..++.+..|+|++.... +.....+||+||||||+|++..+++|+
T Consensus 81 l~~l~~Ni~~N~~~~--~~~v~v~~L~Wg~~~~~-------------------~~~~~~~~D~IlasDv~Y~~~~~~~L~ 139 (173)
T PF10294_consen 81 LELLRRNIELNGSLL--DGRVSVRPLDWGDELDS-------------------DLLEPHSFDVILASDVLYDEELFEPLV 139 (173)
T ss_dssp HHHHHHHHHTT----------EEEE--TTS-HHH-------------------HHHS-SSBSEEEEES--S-GGGHHHHH
T ss_pred hHHHHHHHHhccccc--cccccCcEEEecCcccc-------------------cccccccCCEEEEecccchHHHHHHHH
Confidence 999999999998422 57899999999985210 111235899999999999999999999
Q ss_pred HHHHHhccCCCCeEEEEEeeeeCcc
Q 020158 235 HTLKRLMPLGSKKVLYLALEKRYNF 259 (330)
Q Consensus 235 ~tl~~lL~~~~~~~i~va~~~R~~f 259 (330)
+||.+++++++. +|++++.|...
T Consensus 140 ~tl~~ll~~~~~--vl~~~~~R~~~ 162 (173)
T PF10294_consen 140 RTLKRLLKPNGK--VLLAYKRRRKS 162 (173)
T ss_dssp HHHHHHBTT-TT--EEEEEE-S-TG
T ss_pred HHHHHHhCCCCE--EEEEeCEecHH
Confidence 999999988755 99999999654
|
They make up approximately 0.6-1.6% of the genes in the yeast, human, mouse, Drosophila melanogaster, Caenorhabditis elegans, Arabidopsis thaliana, and Escherichia coli genomes []. This entry represents putative nicotinamide N-methyltransferases involved in rDNA silencing and in lifespan determination. ; PDB: 3BZB_A. |
| >KOG3201 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-19 Score=151.75 Aligned_cols=140 Identities=27% Similarity=0.350 Sum_probs=111.6
Q ss_pred CCCcCe-EeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCc-cCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHcc
Q 020158 91 IPSVGL-QVWKAELVLADFVMHKMCTSSDFNGIISLELGAG-TGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNS 166 (330)
Q Consensus 91 ~~~~G~-~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~G-tGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~ 166 (330)
.++||. .+||++..||.+++++ +..++|++|||||.| |||.|+.+|..+ +.|..||.+...+.++++-+..|.
T Consensus 2 fdntgnvciwpseeala~~~l~~---~n~~rg~~ilelgggft~laglmia~~a~~~~v~ltdgne~svrnv~ki~~~n~ 78 (201)
T KOG3201|consen 2 FDNTGNVCIWPSEEALAWTILRD---PNKIRGRRILELGGGFTGLAGLMIACKAPDSSVWLTDGNEESVRNVEKIRNSNM 78 (201)
T ss_pred cCCCCcEEecccHHHHHHHHHhc---hhHHhHHHHHHhcCchhhhhhhheeeecCCceEEEecCCHHHHHHHHHHHhccc
Confidence 356675 5999999999999988 578999999999999 799999999875 799999999999999999998884
Q ss_pred CCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 167 GVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 167 ~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
..- ..++.+.+.+|..... ......||+|+||||+|.++.++.|+++|+.+|+|.+.
T Consensus 79 ~s~--~tsc~vlrw~~~~aqs---------------------q~eq~tFDiIlaADClFfdE~h~sLvdtIk~lL~p~g~ 135 (201)
T KOG3201|consen 79 ASS--LTSCCVLRWLIWGAQS---------------------QQEQHTFDIILAADCLFFDEHHESLVDTIKSLLRPSGR 135 (201)
T ss_pred ccc--cceehhhHHHHhhhHH---------------------HHhhCcccEEEeccchhHHHHHHHHHHHHHHHhCcccc
Confidence 321 2444444444333211 12335899999999999999999999999999988655
Q ss_pred eEEEEEeeeeCc
Q 020158 247 KVLYLALEKRYN 258 (330)
Q Consensus 247 ~~i~va~~~R~~ 258 (330)
+++..++|.+
T Consensus 136 --Al~fsPRRg~ 145 (201)
T KOG3201|consen 136 --ALLFSPRRGQ 145 (201)
T ss_pred --eeEecCcccc
Confidence 5566688876
|
|
| >KOG2793 consensus Putative N2,N2-dimethylguanosine tRNA methyltransferase [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-17 Score=151.84 Aligned_cols=144 Identities=31% Similarity=0.434 Sum_probs=116.6
Q ss_pred CCcCeEeechHHHHHHHHhhhcCCC------CCCC--CCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHH
Q 020158 92 PSVGLQVWKAELVLADFVMHKMCTS------SDFN--GIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNV 162 (330)
Q Consensus 92 ~~~G~~vW~aa~~La~~l~~~~~~~------~~~~--g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv 162 (330)
......+|+++-.+|.++..+..++ ..++ .++|||||+|||++|+.+|.. +..|+.||.. .++.+++.|.
T Consensus 50 ~~~~~~~w~~~~~la~~~~~~~~~~~~~~~~~g~~~~~~~vlELGsGtglvG~~aa~~~~~~v~ltD~~-~~~~~L~~~~ 128 (248)
T KOG2793|consen 50 QGISAYLWSCATTLAQPLWERRRDSELTATLIGFKTKYINVLELGSGTGLVGILAALLLGAEVVLTDLP-KVVENLKFNR 128 (248)
T ss_pred cceeeEEeehhhccchhhhhhhcCchhhhccccccccceeEEEecCCccHHHHHHHHHhcceeccCCch-hhHHHHHHhh
Confidence 4567899999999999998875311 1123 557999999999999999995 7899999995 8888888888
Q ss_pred HHccCCCCC-CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCC-eeEEEEeccccCcccHHHHHHHHHHh
Q 020158 163 QLNSGVFSH-QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQR-ASVLLAADVIYSDDLTDALFHTLKRL 240 (330)
Q Consensus 163 ~~N~~~~~~-~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~-~DlIlaaDviY~~~~~~~l~~tl~~l 240 (330)
..|....+. ...+.+..|+|++...... .... +|+||||||+|++...+.++.++..+
T Consensus 129 ~~~~~~l~~~g~~v~v~~L~Wg~~~~~~~--------------------~~~~~~DlilasDvvy~~~~~e~Lv~tla~l 188 (248)
T KOG2793|consen 129 DKNNIALNQLGGSVIVAILVWGNALDVSF--------------------RLPNPFDLILASDVVYEEESFEGLVKTLAFL 188 (248)
T ss_pred hhhhhhhhhcCCceeEEEEecCCcccHhh--------------------ccCCcccEEEEeeeeecCCcchhHHHHHHHH
Confidence 777665543 4489999999999754321 1234 89999999999999999999999999
Q ss_pred ccCCCCeEEEEEeeeeCc
Q 020158 241 MPLGSKKVLYLALEKRYN 258 (330)
Q Consensus 241 L~~~~~~~i~va~~~R~~ 258 (330)
|..++ ++++++..|..
T Consensus 189 l~~~~--~i~l~~~lr~~ 204 (248)
T KOG2793|consen 189 LAKDG--TIFLAYPLRRD 204 (248)
T ss_pred HhcCC--eEEEEEecccc
Confidence 97764 88899888864
|
|
| >COG3897 Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.9e-18 Score=146.70 Aligned_cols=136 Identities=24% Similarity=0.325 Sum_probs=111.0
Q ss_pred CCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCC
Q 020158 92 PSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFS 170 (330)
Q Consensus 92 ~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~ 170 (330)
+..+...|.+++.||+|+..+ |+.++||+|||+|+|.||++|++|+.| +.|+.+|+.|..+.+++.|++.|+
T Consensus 54 Ppfwa~~WagG~~lAR~i~~~---PetVrgkrVLd~gagsgLvaIAaa~aGA~~v~a~d~~P~~~~ai~lNa~ang---- 126 (218)
T COG3897 54 PPFWAFAWAGGQVLARYIDDH---PETVRGKRVLDLGAGSGLVAIAAARAGAAEVVAADIDPWLEQAIRLNAAANG---- 126 (218)
T ss_pred chHHHHHHhhhHHHHHHHhcC---ccccccceeeecccccChHHHHHHHhhhHHHHhcCCChHHHHHhhcchhhcc----
Confidence 446788999999999999998 689999999999999999999999996 589999999999999999999997
Q ss_pred CCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEE
Q 020158 171 HQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLY 250 (330)
Q Consensus 171 ~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~ 250 (330)
..+.+...|-.. ....||+||++|++|+....+.++.++.++...| ..++
T Consensus 127 --v~i~~~~~d~~g--------------------------~~~~~Dl~LagDlfy~~~~a~~l~~~~~~l~~~g--~~vl 176 (218)
T COG3897 127 --VSILFTHADLIG--------------------------SPPAFDLLLAGDLFYNHTEADRLIPWKDRLAEAG--AAVL 176 (218)
T ss_pred --ceeEEeeccccC--------------------------CCcceeEEEeeceecCchHHHHHHHHHHHHHhCC--CEEE
Confidence 345555444322 1247999999999999999999999777777543 4566
Q ss_pred EEeeeeCcccccch
Q 020158 251 LALEKRYNFSLNDL 264 (330)
Q Consensus 251 va~~~R~~f~~~~~ 264 (330)
+..+.|..+-..+|
T Consensus 177 vgdp~R~~lpk~~l 190 (218)
T COG3897 177 VGDPGRAYLPKKRL 190 (218)
T ss_pred EeCCCCCCCchhhh
Confidence 75556655544444
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.4e-13 Score=121.31 Aligned_cols=131 Identities=17% Similarity=0.247 Sum_probs=100.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
+.|++|||+|||.|+++..+|+.|++|++.|.++.+++.++..+..|+.. .+|....
T Consensus 58 l~g~~vLDvGCGgG~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~-----------i~y~~~~------------ 114 (243)
T COG2227 58 LPGLRVLDVGCGGGILSEPLARLGASVTGIDASEKPIEVAKLHALESGVN-----------IDYRQAT------------ 114 (243)
T ss_pred CCCCeEEEecCCccHhhHHHHHCCCeeEEecCChHHHHHHHHhhhhcccc-----------ccchhhh------------
Confidence 78999999999999999999999999999999999999999999887632 2222211
Q ss_pred ccccccCccchh-ccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeeeCcccccc--------hhhhcc
Q 020158 199 QERYSWNSSELK-EVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKRYNFSLND--------LDVVAN 269 (330)
Q Consensus 199 ~~~~~w~~~~~~-~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R~~f~~~~--------~d~v~~ 269 (330)
.+++. ..++||+|+|.+|+.+-...+.+++.+.++++|+ +.+++|...|+.-.+.. +..+..
T Consensus 115 -------~edl~~~~~~FDvV~cmEVlEHv~dp~~~~~~c~~lvkP~--G~lf~STinrt~ka~~~~i~~ae~vl~~vP~ 185 (243)
T COG2227 115 -------VEDLASAGGQFDVVTCMEVLEHVPDPESFLRACAKLVKPG--GILFLSTINRTLKAYLLAIIGAEYVLRIVPK 185 (243)
T ss_pred -------HHHHHhcCCCccEEEEhhHHHccCCHHHHHHHHHHHcCCC--cEEEEeccccCHHHHHHHHHHHHHHHHhcCC
Confidence 01122 2369999999999999999999999999999875 67888888887533211 234445
Q ss_pred ccchhhhhhhhh
Q 020158 270 GYSHFRSYIMEE 281 (330)
Q Consensus 270 ~y~~f~~~l~~~ 281 (330)
+--.++.+++..
T Consensus 186 gTH~~~k~irp~ 197 (243)
T COG2227 186 GTHDYRKFIKPA 197 (243)
T ss_pred cchhHHHhcCHH
Confidence 555566666544
|
|
| >PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.8e-12 Score=111.32 Aligned_cols=115 Identities=19% Similarity=0.276 Sum_probs=90.7
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC--eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW--TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~--~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
.++.+|++++... ++++|||||||+|.+|+.+++.+. +|+++|+++.+++.+++|+..|+. ..+.+
T Consensus 18 ~~t~lL~~~l~~~-------~~~~vLDlG~G~G~i~~~la~~~~~~~v~~vDi~~~a~~~a~~n~~~n~~-----~~v~~ 85 (170)
T PF05175_consen 18 AGTRLLLDNLPKH-------KGGRVLDLGCGSGVISLALAKRGPDAKVTAVDINPDALELAKRNAERNGL-----ENVEV 85 (170)
T ss_dssp HHHHHHHHHHHHH-------TTCEEEEETSTTSHHHHHHHHTSTCEEEEEEESBHHHHHHHHHHHHHTTC-----TTEEE
T ss_pred HHHHHHHHHHhhc-------cCCeEEEecCChHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCc-----ccccc
Confidence 3677888888654 567999999999999999999864 599999999999999999999984 33888
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc-----cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD-----LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~-----~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...||.+..+ ..+||+|+++-.++... ....+++...++|+++ +.+++.
T Consensus 86 ~~~d~~~~~~------------------------~~~fD~Iv~NPP~~~~~~~~~~~~~~~i~~a~~~Lk~~--G~l~lv 139 (170)
T PF05175_consen 86 VQSDLFEALP------------------------DGKFDLIVSNPPFHAGGDDGLDLLRDFIEQARRYLKPG--GRLFLV 139 (170)
T ss_dssp EESSTTTTCC------------------------TTCEEEEEE---SBTTSHCHHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred cccccccccc------------------------ccceeEEEEccchhcccccchhhHHHHHHHHHHhccCC--CEEEEE
Confidence 8888876421 35899999998877654 4788899999999775 445443
|
; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A .... |
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.6e-12 Score=101.38 Aligned_cols=104 Identities=17% Similarity=0.161 Sum_probs=81.3
Q ss_pred CCCeEEEEcCccCHHHHHHHH--hCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSR--VAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~--~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+|.+|||||||+|..++.+++ .+.+|++.|+++.+++.+++|+..+.. ..++.+...|+ ...
T Consensus 1 p~~~vLDlGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~i~~~~~d~-~~~----------- 64 (112)
T PF12847_consen 1 PGGRVLDLGCGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGL----SDRITFVQGDA-EFD----------- 64 (112)
T ss_dssp TTCEEEEETTTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTT----TTTEEEEESCC-HGG-----------
T ss_pred CCCEEEEEcCcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC----CCCeEEEECcc-ccC-----------
Confidence 478999999999999999999 589999999999999999999966543 57899999888 210
Q ss_pred cccccccCccchhccCCeeEEEEec-ccc--C-cccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAAD-VIY--S-DDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaD-viY--~-~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.....+||+|++.. +.. . .+....+++.+.++|+++ +.+++.
T Consensus 65 -----------~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg--G~lvi~ 110 (112)
T PF12847_consen 65 -----------PDFLEPFDLVICSGFTLHFLLPLDERRRVLERIRRLLKPG--GRLVIN 110 (112)
T ss_dssp -----------TTTSSCEEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred -----------cccCCCCCEEEECCCccccccchhHHHHHHHHHHHhcCCC--cEEEEE
Confidence 11235799999999 332 1 245677899999999774 556554
|
... |
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.3e-11 Score=106.24 Aligned_cols=106 Identities=22% Similarity=0.291 Sum_probs=81.5
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
+.+|.+++ ...++++|||||||+|..++.++..+.+|+++|+++++++.+++|+..|+ .++.+...|
T Consensus 8 ~~~l~~~l-------~~~~~~~vLdlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d 74 (179)
T TIGR00537 8 SLLLEANL-------RELKPDDVLEIGAGTGLVAIRLKGKGKCILTTDINPFAVKELRENAKLNN------VGLDVVMTD 74 (179)
T ss_pred HHHHHHHH-------HhcCCCeEEEeCCChhHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcC------CceEEEEcc
Confidence 35555554 23566799999999999999999988899999999999999999999876 246677777
Q ss_pred CCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc---------------------cHHHHHHHHHHh
Q 020158 182 WMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD---------------------LTDALFHTLKRL 240 (330)
Q Consensus 182 W~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~---------------------~~~~l~~tl~~l 240 (330)
|.+.. ..+||+|+++..++... ..+.+++.+.++
T Consensus 75 ~~~~~-------------------------~~~fD~Vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 129 (179)
T TIGR00537 75 LFKGV-------------------------RGKFDVILFNPPYLPLEDDLRRGDWLDVAIDGGKDGRKVIDRFLDELPEI 129 (179)
T ss_pred ccccc-------------------------CCcccEEEECCCCCCCcchhcccchhhhhhhcCCchHHHHHHHHHhHHHh
Confidence 65431 23799999887665322 146788889999
Q ss_pred ccCCC
Q 020158 241 MPLGS 245 (330)
Q Consensus 241 L~~~~ 245 (330)
|++++
T Consensus 130 Lk~gG 134 (179)
T TIGR00537 130 LKEGG 134 (179)
T ss_pred hCCCC
Confidence 98764
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >PLN02396 hexaprenyldihydroxybenzoate methyltransferase | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-11 Score=117.85 Aligned_cols=111 Identities=17% Similarity=0.148 Sum_probs=87.4
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.++|.+|||+|||+|..++.+|+.+.+|+++|.++++++.++.++..+.. ..++.+...+-.+..
T Consensus 129 ~~~g~~ILDIGCG~G~~s~~La~~g~~V~GID~s~~~i~~Ar~~~~~~~~----~~~i~~~~~dae~l~----------- 193 (322)
T PLN02396 129 PFEGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPV----TSTIEYLCTTAEKLA----------- 193 (322)
T ss_pred CCCCCEEEEeeCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCc----ccceeEEecCHHHhh-----------
Confidence 35788999999999999999999999999999999999999988776542 235666554432210
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeeeC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKRY 257 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R~ 257 (330)
...++||+|++.+|+++....+.+++.+.++|+++ +.++++...|.
T Consensus 194 ------------~~~~~FD~Vi~~~vLeHv~d~~~~L~~l~r~LkPG--G~liist~nr~ 239 (322)
T PLN02396 194 ------------DEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPN--GATVLSTINRT 239 (322)
T ss_pred ------------hccCCCCEEEEhhHHHhcCCHHHHHHHHHHHcCCC--cEEEEEECCcC
Confidence 01358999999999999999999999999999876 45666654443
|
|
| >KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.8e-12 Score=115.48 Aligned_cols=134 Identities=16% Similarity=0.261 Sum_probs=95.5
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE-EEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV-RDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v-~~ldW~~~~~~~~~~~~~~ 196 (330)
.+.|++|||+|||+||++..+|+.|++|++.|.++++++.++.....+-.. ...+.. .++.=....
T Consensus 87 ~~~g~~ilDvGCGgGLLSepLArlga~V~GID~s~~~V~vA~~h~~~dP~~---~~~~~y~l~~~~~~~E---------- 153 (282)
T KOG1270|consen 87 PLLGMKILDVGCGGGLLSEPLARLGAQVTGIDASDDMVEVANEHKKMDPVL---EGAIAYRLEYEDTDVE---------- 153 (282)
T ss_pred ccCCceEEEeccCccccchhhHhhCCeeEeecccHHHHHHHHHhhhcCchh---ccccceeeehhhcchh----------
Confidence 356789999999999999999999999999999999999998875444321 122211 112111110
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeeeCcccccc--------hhhhc
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKRYNFSLND--------LDVVA 268 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R~~f~~~~--------~d~v~ 268 (330)
...+.||.|+|++|+.+-.+...+++.+.++|+|+ +.++++...|.-.++.. +.+|-
T Consensus 154 -------------~~~~~fDaVvcsevleHV~dp~~~l~~l~~~lkP~--G~lfittinrt~lS~~~~i~~~E~vl~ivp 218 (282)
T KOG1270|consen 154 -------------GLTGKFDAVVCSEVLEHVKDPQEFLNCLSALLKPN--GRLFITTINRTILSFAGTIFLAEIVLRIVP 218 (282)
T ss_pred -------------hcccccceeeeHHHHHHHhCHHHHHHHHHHHhCCC--CceEeeehhhhHHHhhccccHHHHHHHhcC
Confidence 02346999999999999999999999999999886 56778888886544321 23444
Q ss_pred cccchhhhhhh
Q 020158 269 NGYSHFRSYIM 279 (330)
Q Consensus 269 ~~y~~f~~~l~ 279 (330)
.|--++..++.
T Consensus 219 ~Gth~~ekfi~ 229 (282)
T KOG1270|consen 219 KGTHTWEKFIN 229 (282)
T ss_pred CCCcCHHHcCC
Confidence 44445555554
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.6e-11 Score=106.89 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=81.0
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
...+.+|||+|||+|..++.+|+.+.+|++.|+++.+++.+++++..++. .++.+...|+.+..
T Consensus 28 ~~~~~~vLDiGcG~G~~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~-----~~v~~~~~d~~~~~----------- 91 (197)
T PRK11207 28 VVKPGKTLDLGCGNGRNSLYLAANGFDVTAWDKNPMSIANLERIKAAENL-----DNLHTAVVDLNNLT----------- 91 (197)
T ss_pred cCCCCcEEEECCCCCHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CcceEEecChhhCC-----------
Confidence 34678999999999999999999999999999999999999999987653 34666666654321
Q ss_pred cccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~ 246 (330)
....||+|+++.++|+. .....+++.+.++|++++.
T Consensus 92 -------------~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~ 129 (197)
T PRK11207 92 -------------FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGY 129 (197)
T ss_pred -------------cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 12469999999998753 4678999999999988743
|
|
| >COG4123 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.5e-11 Score=112.22 Aligned_cols=120 Identities=18% Similarity=0.241 Sum_probs=100.2
Q ss_pred cCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-C-CeEEEEeCchHHHHHHHHHHHHccCCCCC
Q 020158 94 VGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-A-WTVFLTDHGNYILDNCAKNVQLNSGVFSH 171 (330)
Q Consensus 94 ~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~ 171 (330)
.|++.=-.|++|+.|.. ....++|||||||+|++|+++|++ . .+|++.++.+++.+++++|+++|..
T Consensus 25 ~~~~~~~DaiLL~~~~~-------~~~~~~IlDlGaG~G~l~L~la~r~~~a~I~~VEiq~~~a~~A~~nv~ln~l---- 93 (248)
T COG4123 25 CGFRYGTDAILLAAFAP-------VPKKGRILDLGAGNGALGLLLAQRTEKAKIVGVEIQEEAAEMAQRNVALNPL---- 93 (248)
T ss_pred CccccccHHHHHHhhcc-------cccCCeEEEecCCcCHHHHHHhccCCCCcEEEEEeCHHHHHHHHHHHHhCcc----
Confidence 57777779999999973 233789999999999999999998 4 7999999999999999999999986
Q ss_pred CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc------------------cHHHH
Q 020158 172 QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD------------------LTDAL 233 (330)
Q Consensus 172 ~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~------------------~~~~l 233 (330)
..++++...|..+..... ...+||+|+|+-..|... .++.+
T Consensus 94 ~~ri~v~~~Di~~~~~~~---------------------~~~~fD~Ii~NPPyf~~~~~~~~~~~~~~Ar~e~~~~le~~ 152 (248)
T COG4123 94 EERIQVIEADIKEFLKAL---------------------VFASFDLIICNPPYFKQGSRLNENPLRAIARHEITLDLEDL 152 (248)
T ss_pred hhceeEehhhHHHhhhcc---------------------cccccCEEEeCCCCCCCccccCcChhhhhhhhhhcCCHHHH
Confidence 688999999877653322 224799999999888743 47899
Q ss_pred HHHHHHhccCCC
Q 020158 234 FHTLKRLMPLGS 245 (330)
Q Consensus 234 ~~tl~~lL~~~~ 245 (330)
+++..++|+++|
T Consensus 153 i~~a~~~lk~~G 164 (248)
T COG4123 153 IRAAAKLLKPGG 164 (248)
T ss_pred HHHHHHHccCCC
Confidence 999999998764
|
|
| >PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.5e-11 Score=100.52 Aligned_cols=106 Identities=16% Similarity=0.226 Sum_probs=87.1
Q ss_pred CCCeEEEEcCccCHHHHHHHH-h--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSR-V--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~-~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
++.+|||||||+|..++.++. . +.+|++.|+++.+++.++.+++.++. .++++...|+.+. +..
T Consensus 3 ~~~~iLDlGcG~G~~~~~l~~~~~~~~~i~gvD~s~~~i~~a~~~~~~~~~-----~ni~~~~~d~~~l-~~~------- 69 (152)
T PF13847_consen 3 SNKKILDLGCGTGRLLIQLAKELNPGAKIIGVDISEEMIEYAKKRAKELGL-----DNIEFIQGDIEDL-PQE------- 69 (152)
T ss_dssp TTSEEEEET-TTSHHHHHHHHHSTTTSEEEEEESSHHHHHHHHHHHHHTTS-----TTEEEEESBTTCG-CGC-------
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCCCEEEEEECcHHHHHHhhcccccccc-----cccceEEeehhcc-ccc-------
Confidence 468999999999999999994 4 67999999999999999999998873 5899999998873 210
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
+ ...||+|+++.++|+......+++.+.++|+++ +.+++...
T Consensus 70 ------------~--~~~~D~I~~~~~l~~~~~~~~~l~~~~~~lk~~--G~~i~~~~ 111 (152)
T PF13847_consen 70 ------------L--EEKFDIIISNGVLHHFPDPEKVLKNIIRLLKPG--GILIISDP 111 (152)
T ss_dssp ------------S--STTEEEEEEESTGGGTSHHHHHHHHHHHHEEEE--EEEEEEEE
T ss_pred ------------c--CCCeeEEEEcCchhhccCHHHHHHHHHHHcCCC--cEEEEEEC
Confidence 0 158999999999999999999999999999764 55555443
|
... |
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-11 Score=111.16 Aligned_cols=101 Identities=14% Similarity=0.148 Sum_probs=83.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
-++.+|||+|||+|..++.++..+.+|+++|+++++++.+++++..++. ..++.+...+..+..+.
T Consensus 43 ~~~~~vLDiGcG~G~~a~~la~~g~~v~~vD~s~~~l~~a~~~~~~~g~----~~~v~~~~~d~~~l~~~---------- 108 (255)
T PRK11036 43 PRPLRVLDAGGGEGQTAIKLAELGHQVILCDLSAEMIQRAKQAAEAKGV----SDNMQFIHCAAQDIAQH---------- 108 (255)
T ss_pred CCCCEEEEeCCCchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC----ccceEEEEcCHHHHhhh----------
Confidence 3567999999999999999999999999999999999999999987653 34677776665442110
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
..+.||+|++..++++......+++.+.++|++++
T Consensus 109 ------------~~~~fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG 143 (255)
T PRK11036 109 ------------LETPVDLILFHAVLEWVADPKSVLQTLWSVLRPGG 143 (255)
T ss_pred ------------cCCCCCEEEehhHHHhhCCHHHHHHHHHHHcCCCe
Confidence 13579999999999998888999999999998864
|
|
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2e-10 Score=100.23 Aligned_cols=116 Identities=20% Similarity=0.317 Sum_probs=86.9
Q ss_pred EeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE
Q 020158 97 QVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH 176 (330)
Q Consensus 97 ~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~ 176 (330)
..|+.+.+|++++.. .++++|||+|||+|..++.++..+.+|+++|+++++++.+++|+..|... ...+.
T Consensus 7 ~p~~~~~~l~~~~~~-------~~~~~vLd~G~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~---~~~~~ 76 (188)
T PRK14968 7 EPAEDSFLLAENAVD-------KKGDRVLEVGTGSGIVAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIR---NNGVE 76 (188)
T ss_pred CcchhHHHHHHhhhc-------cCCCEEEEEccccCHHHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCC---CcceE
Confidence 346667777777632 46789999999999999999998999999999999999999999887642 11266
Q ss_pred EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC---------------------cccHHHHHH
Q 020158 177 VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS---------------------DDLTDALFH 235 (330)
Q Consensus 177 v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~---------------------~~~~~~l~~ 235 (330)
+...|+.+.. ....||+|+++..++. ...++.+++
T Consensus 77 ~~~~d~~~~~------------------------~~~~~d~vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 132 (188)
T PRK14968 77 VIRSDLFEPF------------------------RGDKFDVILFNPPYLPTEEEEEWDDWLNYALSGGKDGREVIDRFLD 132 (188)
T ss_pred EEeccccccc------------------------cccCceEEEECCCcCCCCchhhhhhhhhhhhccCcChHHHHHHHHH
Confidence 6666665431 1127999998765543 123567889
Q ss_pred HHHHhccCCCC
Q 020158 236 TLKRLMPLGSK 246 (330)
Q Consensus 236 tl~~lL~~~~~ 246 (330)
.+.++|++++.
T Consensus 133 ~~~~~Lk~gG~ 143 (188)
T PRK14968 133 EVGRYLKPGGR 143 (188)
T ss_pred HHHHhcCCCeE
Confidence 99999987643
|
|
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.6e-10 Score=102.58 Aligned_cols=98 Identities=12% Similarity=0.100 Sum_probs=77.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..++.+|+.+.+|+++|+++.+++.+++++..++. ++.+...|.....
T Consensus 29 ~~~~~vLDiGcG~G~~a~~la~~g~~V~~iD~s~~~l~~a~~~~~~~~~------~v~~~~~d~~~~~------------ 90 (195)
T TIGR00477 29 VAPCKTLDLGCGQGRNSLYLSLAGYDVRAWDHNPASIASVLDMKARENL------PLRTDAYDINAAA------------ 90 (195)
T ss_pred CCCCcEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHhCC------CceeEeccchhcc------------
Confidence 4567999999999999999999999999999999999999999877652 2444444432210
Q ss_pred ccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~ 246 (330)
...+||+|+++.++++. .....+++.+.++|++++.
T Consensus 91 ------------~~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 128 (195)
T TIGR00477 91 ------------LNEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGY 128 (195)
T ss_pred ------------ccCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcE
Confidence 12479999999998754 4678899999999988643
|
Part of a tellurite-reducing operon tehA and tehB |
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=109.72 Aligned_cols=129 Identities=17% Similarity=0.253 Sum_probs=87.0
Q ss_pred eeEEEecccccCCCCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHH
Q 020158 79 FNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDN 157 (330)
Q Consensus 79 ~~i~i~~~~~t~~~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~ 157 (330)
..|.|.-+++ .+ ||. -+...+-.++|.+. ..+|++|||+|||+|++||+++++| ++|+++|++|.+++.
T Consensus 130 ~~I~idPg~A--FG-TG~--H~TT~lcl~~l~~~-----~~~g~~vLDvG~GSGILaiaA~klGA~~v~a~DiDp~Av~~ 199 (295)
T PF06325_consen 130 IVIEIDPGMA--FG-TGH--HPTTRLCLELLEKY-----VKPGKRVLDVGCGSGILAIAAAKLGAKKVVAIDIDPLAVEA 199 (295)
T ss_dssp EEEEESTTSS--S--SSH--CHHHHHHHHHHHHH-----SSTTSEEEEES-TTSHHHHHHHHTTBSEEEEEESSCHHHHH
T ss_pred EEEEECCCCc--cc-CCC--CHHHHHHHHHHHHh-----ccCCCEEEEeCCcHHHHHHHHHHcCCCeEEEecCCHHHHHH
Confidence 4566666665 22 232 23555556666554 3678999999999999999999997 489999999999999
Q ss_pred HHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHH
Q 020158 158 CAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTL 237 (330)
Q Consensus 158 ~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl 237 (330)
++.|+.+|+. ..++.+. .... . ...+||+|+|+ ++ ...+-.++..+
T Consensus 200 a~~N~~~N~~----~~~~~v~---~~~~-----------------------~-~~~~~dlvvAN-I~--~~vL~~l~~~~ 245 (295)
T PF06325_consen 200 ARENAELNGV----EDRIEVS---LSED-----------------------L-VEGKFDLVVAN-IL--ADVLLELAPDI 245 (295)
T ss_dssp HHHHHHHTT-----TTCEEES---CTSC-----------------------T-CCS-EEEEEEE-S---HHHHHHHHHHC
T ss_pred HHHHHHHcCC----CeeEEEE---Eecc-----------------------c-ccccCCEEEEC-CC--HHHHHHHHHHH
Confidence 9999999986 3455442 1111 0 12689999976 22 22445677778
Q ss_pred HHhccCCCCeEEEEEe
Q 020158 238 KRLMPLGSKKVLYLAL 253 (330)
Q Consensus 238 ~~lL~~~~~~~i~va~ 253 (330)
.++|+++ +.+++|-
T Consensus 246 ~~~l~~~--G~lIlSG 259 (295)
T PF06325_consen 246 ASLLKPG--GYLILSG 259 (295)
T ss_dssp HHHEEEE--EEEEEEE
T ss_pred HHhhCCC--CEEEEcc
Confidence 8888664 6666664
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=99.19 E-value=5e-10 Score=107.72 Aligned_cols=100 Identities=12% Similarity=0.001 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++++..++. ..++.+...|..+..-
T Consensus 117 ~~~~~VLDiGCG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~----~~~v~~~~~D~~~~~~---------- 182 (340)
T PLN02244 117 KRPKRIVDVGCGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGL----SDKVSFQVADALNQPF---------- 182 (340)
T ss_pred CCCCeEEEecCCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEEcCcccCCC----------
Confidence 46789999999999999999886 78999999999999999999988763 3567887777654310
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
..+.||+|++.+++++......+++.+.++|++|+
T Consensus 183 -------------~~~~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG 217 (340)
T PLN02244 183 -------------EDGQFDLVWSMESGEHMPDKRKFVQELARVAAPGG 217 (340)
T ss_pred -------------CCCCccEEEECCchhccCCHHHHHHHHHHHcCCCc
Confidence 12579999999999998888999999999998864
|
|
| >PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.5e-10 Score=88.96 Aligned_cols=90 Identities=19% Similarity=0.216 Sum_probs=72.8
Q ss_pred EEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccc
Q 020158 125 LELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYS 203 (330)
Q Consensus 125 LELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~ 203 (330)
||+|||+|..+..+++. +.+|+++|.++.+++.++++...+ .+.+...|..+..-
T Consensus 1 LdiG~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~--------~~~~~~~d~~~l~~---------------- 56 (95)
T PF08241_consen 1 LDIGCGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNE--------GVSFRQGDAEDLPF---------------- 56 (95)
T ss_dssp EEET-TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTS--------TEEEEESBTTSSSS----------------
T ss_pred CEecCcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhccccc--------CchheeehHHhCcc----------------
Confidence 89999999999999999 899999999999999999877543 34477777655411
Q ss_pred cCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 204 WNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 204 w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
..+.||+|++..++++......+++.+.++|++++
T Consensus 57 -------~~~sfD~v~~~~~~~~~~~~~~~l~e~~rvLk~gG 91 (95)
T PF08241_consen 57 -------PDNSFDVVFSNSVLHHLEDPEAALREIYRVLKPGG 91 (95)
T ss_dssp --------TT-EEEEEEESHGGGSSHHHHHHHHHHHHEEEEE
T ss_pred -------ccccccccccccceeeccCHHHHHHHHHHHcCcCe
Confidence 23689999999999999999999999999998763
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B .... |
| >PLN02585 magnesium protoporphyrin IX methyltransferase | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.3e-10 Score=106.26 Aligned_cols=97 Identities=14% Similarity=0.165 Sum_probs=69.8
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++.+|||+|||+|..++.+++.|.+|+++|+++.|++.+++|+...........++.+...|+...
T Consensus 142 ~~~~~~VLDlGcGtG~~a~~la~~g~~V~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~f~~~Dl~~l------------ 209 (315)
T PLN02585 142 SLAGVTVCDAGCGTGSLAIPLALEGAIVSASDISAAMVAEAERRAKEALAALPPEVLPKFEANDLESL------------ 209 (315)
T ss_pred CCCCCEEEEecCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcccccccccceEEEEcchhhc------------
Confidence 35788999999999999999999999999999999999999999875421100013455555554321
Q ss_pred cccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHh
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRL 240 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~l 240 (330)
.+.||+|++.+++++... ...+++.+.++
T Consensus 210 --------------~~~fD~Vv~~~vL~H~p~~~~~~ll~~l~~l 240 (315)
T PLN02585 210 --------------SGKYDTVTCLDVLIHYPQDKADGMIAHLASL 240 (315)
T ss_pred --------------CCCcCEEEEcCEEEecCHHHHHHHHHHHHhh
Confidence 247999999999876432 33455555543
|
|
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.1e-10 Score=98.31 Aligned_cols=92 Identities=18% Similarity=0.107 Sum_probs=75.0
Q ss_pred CCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
+.+|||+|||+|..++.+|+. +.+|+++|.++++++.+++|++.|+. .++++...+..+..
T Consensus 46 g~~VLDiGcGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l-----~~i~~~~~d~~~~~------------ 108 (187)
T PRK00107 46 GERVLDVGSGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGL-----KNVTVVHGRAEEFG------------ 108 (187)
T ss_pred CCeEEEEcCCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCC-----CCEEEEeccHhhCC------------
Confidence 889999999999999999874 57999999999999999999999873 34777777754421
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
..++||+|++.. ....+.+++.+.++|++++
T Consensus 109 ------------~~~~fDlV~~~~----~~~~~~~l~~~~~~LkpGG 139 (187)
T PRK00107 109 ------------QEEKFDVVTSRA----VASLSDLVELCLPLLKPGG 139 (187)
T ss_pred ------------CCCCccEEEEcc----ccCHHHHHHHHHHhcCCCe
Confidence 124799999864 2457889999999998764
|
|
| >TIGR00138 gidB 16S rRNA methyltransferase GidB | Back alignment and domain information |
|---|
Probab=99.16 E-value=5e-10 Score=98.33 Aligned_cols=94 Identities=14% Similarity=0.183 Sum_probs=74.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
+++++|||+|||+|..++.+|..+ .+|++.|.++.+++.+++|++.++. .++++...|+.+..
T Consensus 41 ~~~~~vLDiGcGtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~-----~~i~~i~~d~~~~~---------- 105 (181)
T TIGR00138 41 LDGKKVIDIGSGAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGL-----NNVEIVNGRAEDFQ---------- 105 (181)
T ss_pred cCCCeEEEecCCCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCC-----CCeEEEecchhhcc----------
Confidence 468999999999999999988763 6899999999999999999988762 45888888765521
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
...+||+|++.- + ...+.+++.+.++|++++
T Consensus 106 --------------~~~~fD~I~s~~-~---~~~~~~~~~~~~~LkpgG 136 (181)
T TIGR00138 106 --------------HEEQFDVITSRA-L---ASLNVLLELTLNLLKVGG 136 (181)
T ss_pred --------------ccCCccEEEehh-h---hCHHHHHHHHHHhcCCCC
Confidence 125799998753 2 346678888999998764
|
GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA. |
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.7e-10 Score=103.93 Aligned_cols=132 Identities=19% Similarity=0.206 Sum_probs=87.9
Q ss_pred eeEEEecccccCCCCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHH
Q 020158 79 FNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDN 157 (330)
Q Consensus 79 ~~i~i~~~~~t~~~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~ 157 (330)
..|.|.-+++-+ ||+. +...+-.++|... ..+|++|||+|||+|++||+++++|+ +|+++|++|.+++.
T Consensus 131 ~~i~lDPGlAFG---TG~H--pTT~lcL~~Le~~-----~~~g~~vlDvGcGSGILaIAa~kLGA~~v~g~DiDp~AV~a 200 (300)
T COG2264 131 LNIELDPGLAFG---TGTH--PTTSLCLEALEKL-----LKKGKTVLDVGCGSGILAIAAAKLGAKKVVGVDIDPQAVEA 200 (300)
T ss_pred eEEEEccccccC---CCCC--hhHHHHHHHHHHh-----hcCCCEEEEecCChhHHHHHHHHcCCceEEEecCCHHHHHH
Confidence 445666666532 3332 2333334444433 35899999999999999999999975 69999999999999
Q ss_pred HHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHH
Q 020158 158 CAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTL 237 (330)
Q Consensus 158 ~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl 237 (330)
++.|+.+|+.. ..+. ..+.... ......+||+|+|+ + -.+.+..|..-+
T Consensus 201 a~eNa~~N~v~----~~~~---~~~~~~~---------------------~~~~~~~~DvIVAN-I--LA~vl~~La~~~ 249 (300)
T COG2264 201 ARENARLNGVE----LLVQ---AKGFLLL---------------------EVPENGPFDVIVAN-I--LAEVLVELAPDI 249 (300)
T ss_pred HHHHHHHcCCc----hhhh---cccccch---------------------hhcccCcccEEEeh-h--hHHHHHHHHHHH
Confidence 99999999852 1111 1111110 11123589999986 2 133455788888
Q ss_pred HHhccCCCCeEEEEEe
Q 020158 238 KRLMPLGSKKVLYLAL 253 (330)
Q Consensus 238 ~~lL~~~~~~~i~va~ 253 (330)
.++++++ +.+++|-
T Consensus 250 ~~~lkpg--g~lIlSG 263 (300)
T COG2264 250 KRLLKPG--GRLILSG 263 (300)
T ss_pred HHHcCCC--ceEEEEe
Confidence 8899774 5566653
|
|
| >TIGR00452 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.3e-10 Score=106.79 Aligned_cols=117 Identities=15% Similarity=0.190 Sum_probs=84.0
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH 176 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~ 176 (330)
-|.+.+....++.+- ..++|++|||+|||+|...+.++..+ ..|++.|.++.|+..++..-..-.. ..++.
T Consensus 103 e~~s~~~~~~~l~~l----~~~~g~~VLDvGCG~G~~~~~~~~~g~~~v~GiDpS~~ml~q~~~~~~~~~~----~~~v~ 174 (314)
T TIGR00452 103 EWRSDIKWDRVLPHL----SPLKGRTILDVGCGSGYHMWRMLGHGAKSLVGIDPTVLFLCQFEAVRKLLDN----DKRAI 174 (314)
T ss_pred HHHHHHHHHHHHHhc----CCCCCCEEEEeccCCcHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHHHhcc----CCCeE
Confidence 466665555544332 46789999999999999988888876 4799999999888654322221110 24566
Q ss_pred EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 177 VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 177 v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
+..++..+.. ....||+|++..++|+......+++.+.+.|++||.
T Consensus 175 ~~~~~ie~lp------------------------~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpGG~ 220 (314)
T TIGR00452 175 LEPLGIEQLH------------------------ELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIKGE 220 (314)
T ss_pred EEECCHHHCC------------------------CCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCCCE
Confidence 6665544321 124799999999999999999999999999988743
|
Known examples to date are restricted to the proteobacteria. |
| >COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-11 Score=109.24 Aligned_cols=152 Identities=22% Similarity=0.257 Sum_probs=104.3
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec-CCCCCCCCccCCCCCccc
Q 020158 121 GIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN-WMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld-W~~~~~~~~~~~~~~~~~ 199 (330)
-+++|||||||||.|..+-.++.++++.|+|..||+.+...=.... ..+.++. +...
T Consensus 126 F~~~lDLGCGTGL~G~~lR~~a~~ltGvDiS~nMl~kA~eKg~YD~--------L~~Aea~~Fl~~-------------- 183 (287)
T COG4976 126 FRRMLDLGCGTGLTGEALRDMADRLTGVDISENMLAKAHEKGLYDT--------LYVAEAVLFLED-------------- 183 (287)
T ss_pred cceeeecccCcCcccHhHHHHHhhccCCchhHHHHHHHHhccchHH--------HHHHHHHHHhhh--------------
Confidence 3689999999999999999999999999999999988765432211 1111111 2221
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeeeCc---ccccchhhhccccchhhh
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKRYN---FSLNDLDVVANGYSHFRS 276 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R~~---f~~~~~d~v~~~y~~f~~ 276 (330)
....+||+|.|+||+-+...++.++.....+|+++ +.+.+|.+.-.. |.+.. ..-|.|-++
T Consensus 184 ----------~~~er~DLi~AaDVl~YlG~Le~~~~~aa~~L~~g--GlfaFSvE~l~~~~~f~l~p----s~RyAH~~~ 247 (287)
T COG4976 184 ----------LTQERFDLIVAADVLPYLGALEGLFAGAAGLLAPG--GLFAFSVETLPDDGGFVLGP----SQRYAHSES 247 (287)
T ss_pred ----------ccCCcccchhhhhHHHhhcchhhHHHHHHHhcCCC--ceEEEEecccCCCCCeecch----hhhhccchH
Confidence 12358999999999999999999999999999775 455555443211 21111 234899999
Q ss_pred hhhhhhcccccccccCCCeeeEEecCCCcCcccccccCCCceEEEEE
Q 020158 277 YIMEEGEHRRFERESFPAFVGKCIDLNEFPQYVREYDRGNDVELWQI 323 (330)
Q Consensus 277 ~l~~~~~~~~~~~~~~~~f~v~~i~~~~~p~~~~~yer~~~l~lw~i 323 (330)
|+++... ..||.+-.+....+ +-++++.+-.--+
T Consensus 248 YVr~~l~--------~~Gl~~i~~~~tti-----R~d~g~pv~G~L~ 281 (287)
T COG4976 248 YVRALLA--------ASGLEVIAIEDTTI-----RRDAGEPVPGILV 281 (287)
T ss_pred HHHHHHH--------hcCceEEEeecccc-----hhhcCCCCCCceE
Confidence 9987653 45777777665544 4456665554333
|
|
| >PRK12335 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.6e-10 Score=105.48 Aligned_cols=98 Identities=14% Similarity=0.158 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..++.+|+.|.+|+++|+++.+++.+++|+..++. ++.+...|.....
T Consensus 119 ~~~~~vLDlGcG~G~~~~~la~~g~~V~avD~s~~ai~~~~~~~~~~~l------~v~~~~~D~~~~~------------ 180 (287)
T PRK12335 119 VKPGKALDLGCGQGRNSLYLALLGFDVTAVDINQQSLENLQEIAEKENL------NIRTGLYDINSAS------------ 180 (287)
T ss_pred cCCCCEEEeCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC------ceEEEEechhccc------------
Confidence 4567999999999999999999999999999999999999999988752 4555555543321
Q ss_pred ccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~ 246 (330)
..++||+|++..++++. +....+++.+.++|++++.
T Consensus 181 ------------~~~~fD~I~~~~vl~~l~~~~~~~~l~~~~~~LkpgG~ 218 (287)
T PRK12335 181 ------------IQEEYDFILSTVVLMFLNRERIPAIIKNMQEHTNPGGY 218 (287)
T ss_pred ------------ccCCccEEEEcchhhhCCHHHHHHHHHHHHHhcCCCcE
Confidence 12579999999998753 4778899999999988643
|
|
| >PRK15068 tRNA mo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.5e-10 Score=106.18 Aligned_cols=117 Identities=16% Similarity=0.214 Sum_probs=84.6
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH 176 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~ 176 (330)
-|++.+.... +..+. ..++|++|||+|||+|..++.++..+ ..|++.|.++.++...+........ ..++.
T Consensus 104 ew~s~~k~~~-l~~~l---~~l~g~~VLDIGCG~G~~~~~la~~g~~~V~GiD~S~~~l~q~~a~~~~~~~----~~~i~ 175 (322)
T PRK15068 104 EWRSDWKWDR-VLPHL---SPLKGRTVLDVGCGNGYHMWRMLGAGAKLVVGIDPSQLFLCQFEAVRKLLGN----DQRAH 175 (322)
T ss_pred eehHHhHHHH-HHHhh---CCCCCCEEEEeccCCcHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHHhcCC----CCCeE
Confidence 5765554333 33332 45789999999999999999999886 4799999998877544332222111 24677
Q ss_pred EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 177 VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 177 v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
+...+..+.. ....||+|++..++|+......+++.+.+.|++|+.
T Consensus 176 ~~~~d~e~lp------------------------~~~~FD~V~s~~vl~H~~dp~~~L~~l~~~LkpGG~ 221 (322)
T PRK15068 176 LLPLGIEQLP------------------------ALKAFDTVFSMGVLYHRRSPLDHLKQLKDQLVPGGE 221 (322)
T ss_pred EEeCCHHHCC------------------------CcCCcCEEEECChhhccCCHHHHHHHHHHhcCCCcE
Confidence 7777665431 135799999999999999999999999999987643
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.2e-09 Score=98.77 Aligned_cols=112 Identities=20% Similarity=0.216 Sum_probs=82.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
.+.+|++++... ...++.+|||+|||+|..++.+++.+. +|+++|+++.+++.+++|+..|+ .++.+..
T Consensus 21 ds~~l~~~l~~~----~~~~~~~vLDlGcG~G~~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~------~~~~~~~ 90 (223)
T PRK14967 21 DTQLLADALAAE----GLGPGRRVLDLCTGSGALAVAAAAAGAGSVTAVDISRRAVRSARLNALLAG------VDVDVRR 90 (223)
T ss_pred cHHHHHHHHHhc----ccCCCCeEEEecCCHHHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhC------CeeEEEE
Confidence 456777777543 334578999999999999999998764 99999999999999999999876 2466676
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc---------------------cHHHHHHHHH
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD---------------------LTDALFHTLK 238 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~---------------------~~~~l~~tl~ 238 (330)
.|+.+.. ...+||+|+++-..+... .++.+++.+.
T Consensus 91 ~d~~~~~------------------------~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~ 146 (223)
T PRK14967 91 GDWARAV------------------------EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAP 146 (223)
T ss_pred Cchhhhc------------------------cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHH
Confidence 6765421 124799999864332211 2456778888
Q ss_pred HhccCCCC
Q 020158 239 RLMPLGSK 246 (330)
Q Consensus 239 ~lL~~~~~ 246 (330)
++|++++.
T Consensus 147 ~~Lk~gG~ 154 (223)
T PRK14967 147 ALLAPGGS 154 (223)
T ss_pred HhcCCCcE
Confidence 99987643
|
|
| >PRK15001 SAM-dependent 23S ribosomal RNA mG1835 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1e-09 Score=106.65 Aligned_cols=104 Identities=19% Similarity=0.247 Sum_probs=76.2
Q ss_pred CCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
+.+|||||||+|.+|+.+++. ..+|+++|.++.+++.++.|++.|.... ..++.+..-|....
T Consensus 229 ~~~VLDLGCGtGvi~i~la~~~P~~~V~~vD~S~~Av~~A~~N~~~n~~~~--~~~v~~~~~D~l~~------------- 293 (378)
T PRK15001 229 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA--LDRCEFMINNALSG------------- 293 (378)
T ss_pred CCeEEEEeccccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCccc--CceEEEEEcccccc-------------
Confidence 459999999999999999987 4799999999999999999999996311 12455554443221
Q ss_pred ccccccCccchhccCCeeEEEEeccccCc-----ccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSD-----DLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~-----~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+ ...+||+|+++-.++.. .....+++...++|+++| .+++.
T Consensus 294 ----------~-~~~~fDlIlsNPPfh~~~~~~~~ia~~l~~~a~~~LkpGG--~L~iV 339 (378)
T PRK15001 294 ----------V-EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING--ELYIV 339 (378)
T ss_pred ----------C-CCCCEEEEEECcCcccCccCCHHHHHHHHHHHHHhcccCC--EEEEE
Confidence 0 12479999997666542 245678888999998764 44443
|
|
| >PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.3e-10 Score=95.16 Aligned_cols=100 Identities=18% Similarity=0.137 Sum_probs=76.9
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++++|||+|||+|..+..++..+.+|+++|+++.+++. .+. .........+.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~g~D~~~~~~~~------~~~------~~~~~~~~~~~-------------- 73 (161)
T PF13489_consen 20 LKPGKRVLDIGCGTGSFLRALAKRGFEVTGVDISPQMIEK------RNV------VFDNFDAQDPP-------------- 73 (161)
T ss_dssp TTTTSEEEEESSTTSHHHHHHHHTTSEEEEEESSHHHHHH------TTS------EEEEEECHTHH--------------
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHhh------hhh------hhhhhhhhhhh--------------
Confidence 5678999999999999999999999999999999998887 111 11111111111
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeeeC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKRY 257 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R~ 257 (330)
...++||+|++.+++++......+++.+.++|+++ +.++++...+.
T Consensus 74 ------------~~~~~fD~i~~~~~l~~~~d~~~~l~~l~~~Lkpg--G~l~~~~~~~~ 119 (161)
T PF13489_consen 74 ------------FPDGSFDLIICNDVLEHLPDPEEFLKELSRLLKPG--GYLVISDPNRD 119 (161)
T ss_dssp ------------CHSSSEEEEEEESSGGGSSHHHHHHHHHHHCEEEE--EEEEEEEEBTT
T ss_pred ------------ccccchhhHhhHHHHhhcccHHHHHHHHHHhcCCC--CEEEEEEcCCc
Confidence 12368999999999999999999999999999875 66777766553
|
... |
| >PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.5e-10 Score=99.33 Aligned_cols=99 Identities=18% Similarity=0.193 Sum_probs=72.5
Q ss_pred CeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccc
Q 020158 122 IISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQER 201 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~ 201 (330)
.++||+|||.|..+..+|.++.+++++|+++.+++.+++.+.. ..+|.+...+....++
T Consensus 45 ~~alEvGCs~G~lT~~LA~rCd~LlavDis~~Al~~Ar~Rl~~-------~~~V~~~~~dvp~~~P-------------- 103 (201)
T PF05401_consen 45 RRALEVGCSIGVLTERLAPRCDRLLAVDISPRALARARERLAG-------LPHVEWIQADVPEFWP-------------- 103 (201)
T ss_dssp EEEEEE--TTSHHHHHHGGGEEEEEEEES-HHHHHHHHHHTTT--------SSEEEEES-TTT-----------------
T ss_pred ceeEecCCCccHHHHHHHHhhCceEEEeCCHHHHHHHHHhcCC-------CCCeEEEECcCCCCCC--------------
Confidence 5899999999999999999999999999999999999988753 3678888888765432
Q ss_pred cccCccchhccCCeeEEEEeccccCcccH---HHHHHHHHHhccCCCCeEEEEEe
Q 020158 202 YSWNSSELKEVQRASVLLAADVIYSDDLT---DALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 202 ~~w~~~~~~~~~~~DlIlaaDviY~~~~~---~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
.++||+|+.++|+|+-... ..+++.+...|+++ +.++++.
T Consensus 104 ----------~~~FDLIV~SEVlYYL~~~~~L~~~l~~l~~~L~pg--G~LV~g~ 146 (201)
T PF05401_consen 104 ----------EGRFDLIVLSEVLYYLDDAEDLRAALDRLVAALAPG--GHLVFGH 146 (201)
T ss_dssp ----------SS-EEEEEEES-GGGSSSHHHHHHHHHHHHHTEEEE--EEEEEEE
T ss_pred ----------CCCeeEEEEehHhHcCCCHHHHHHHHHHHHHHhCCC--CEEEEEE
Confidence 3589999999999997654 45666666777654 5566654
|
The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A. |
| >KOG2920 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.7e-11 Score=110.57 Aligned_cols=164 Identities=24% Similarity=0.302 Sum_probs=106.0
Q ss_pred ccCCCCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHH-HHHHHHc
Q 020158 88 TSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNC-AKNVQLN 165 (330)
Q Consensus 88 ~t~~~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~-~~Nv~~N 165 (330)
.+.....|+++|.+|..|..++....-..-.+.||+|||||||+|+.++.+...+ ..|.++|++.++++.. -.|+..|
T Consensus 84 ~p~vyEGg~k~wecS~dl~~~l~~e~~~~~~~~~k~vLELgCg~~Lp~i~~~~~~~~~~~fqD~na~vl~~~t~pn~~~~ 163 (282)
T KOG2920|consen 84 VPGVYEGGLKLWECSVDLLPYLKEEIGAQMSFSGKRVLELGCGAALPGIFAFVKGAVSVHFQDFNAEVLRLVTLPNILVN 163 (282)
T ss_pred CCceeecceEEeecHHHHHHHHHHHhhhheEecCceeEecCCcccccchhhhhhccceeeeEecchhheeeecccceecc
Confidence 4556788999999999999999865211245789999999999999999999997 8999999998888433 2444444
Q ss_pred cCCCCCCCeeEEEEecCCCCCCCCccCCCCCcccc-ccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 166 SGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQE-RYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 166 ~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~-~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
...- + -|.+...... -..+ ..+|.-. .....+||+|+++..+|.......+. .+.+..-+.
T Consensus 164 ~~~~-----~-----~~~e~~~~~~------i~~s~l~dg~~~-~t~~~~ydlIlsSetiy~~~~~~~~~-~~~r~~l~~ 225 (282)
T KOG2920|consen 164 SHAG-----V-----EEKENHKVDE------ILNSLLSDGVFN-HTERTHYDLILSSETIYSIDSLAVLY-LLHRPCLLK 225 (282)
T ss_pred hhhh-----h-----hhhhccccee------ccccccccchhh-hccccchhhhhhhhhhhCcchhhhhH-hhhhhhcCC
Confidence 3211 0 0111100000 0000 0012000 00113899999999999999888884 333333335
Q ss_pred CCeEEEEEeeeeCcccccchhhhccccchhhh
Q 020158 245 SKKVLYLALEKRYNFSLNDLDVVANGYSHFRS 276 (330)
Q Consensus 245 ~~~~i~va~~~R~~f~~~~~d~v~~~y~~f~~ 276 (330)
.++++|+|.++-|. . |..+..+|++
T Consensus 226 ~D~~~~~aAK~~yF-g------Vgg~i~~f~~ 250 (282)
T KOG2920|consen 226 TDGVFYVAAKKLYF-G------VGGGIEEFNS 250 (282)
T ss_pred ccchhhhhhHhhcc-C------cCcchhhhcc
Confidence 57888888766553 3 5566788863
|
|
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.7e-09 Score=90.56 Aligned_cols=98 Identities=16% Similarity=0.054 Sum_probs=74.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||+|||+|..++.+++.+ .+|++.|.++.+++.+++|+..++. .++.+...+....
T Consensus 30 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~-----~~i~~~~~d~~~~----------- 93 (187)
T PRK08287 30 HRAKHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGC-----GNIDIIPGEAPIE----------- 93 (187)
T ss_pred CCCCEEEEECCcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-----CCeEEEecCchhh-----------
Confidence 467899999999999999999874 6999999999999999999988763 3466655443211
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
...+||+|+++... ..+..+++.+.++|+++ +.+++
T Consensus 94 --------------~~~~~D~v~~~~~~---~~~~~~l~~~~~~Lk~g--G~lv~ 129 (187)
T PRK08287 94 --------------LPGKADAIFIGGSG---GNLTAIIDWSLAHLHPG--GRLVL 129 (187)
T ss_pred --------------cCcCCCEEEECCCc---cCHHHHHHHHHHhcCCC--eEEEE
Confidence 12479999986543 34677889999999775 44444
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.5e-09 Score=100.64 Aligned_cols=117 Identities=19% Similarity=0.293 Sum_probs=81.6
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH 176 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~ 176 (330)
..+...+..+++... ..++++|||+|||+|..++.+++.+ .+|+++|+++.+++.+++|+..|+. ...+.
T Consensus 142 ~h~tt~l~l~~l~~~-----~~~g~~VLDvGcGsG~lai~aa~~g~~~V~avDid~~al~~a~~n~~~n~~----~~~~~ 212 (288)
T TIGR00406 142 THPTTSLCLEWLEDL-----DLKDKNVIDVGCGSGILSIAALKLGAAKVVGIDIDPLAVESARKNAELNQV----SDRLQ 212 (288)
T ss_pred CCHHHHHHHHHHHhh-----cCCCCEEEEeCCChhHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHcCC----CcceE
Confidence 334555544555432 2467999999999999999999886 5899999999999999999999874 23344
Q ss_pred EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 177 VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 177 v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
+...+-... ...+||+|++.- + ...+..++..+.++|+++ +.++++.
T Consensus 213 ~~~~~~~~~-------------------------~~~~fDlVvan~-~--~~~l~~ll~~~~~~Lkpg--G~li~sg 259 (288)
T TIGR00406 213 VKLIYLEQP-------------------------IEGKADVIVANI-L--AEVIKELYPQFSRLVKPG--GWLILSG 259 (288)
T ss_pred EEecccccc-------------------------cCCCceEEEEec-C--HHHHHHHHHHHHHHcCCC--cEEEEEe
Confidence 443321100 124799999853 2 234567888899999775 4566643
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.3e-09 Score=98.73 Aligned_cols=124 Identities=19% Similarity=0.255 Sum_probs=86.0
Q ss_pred eeEEEecccccCCCCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHH
Q 020158 79 FNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDN 157 (330)
Q Consensus 79 ~~i~i~~~~~t~~~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~ 157 (330)
..+.|..+++. .+|. .+.+..+.+++... ..++++|||+|||+|..++.+++.+. +|+++|+++.+++.
T Consensus 88 ~~i~i~p~~af---gtg~--h~tt~~~l~~l~~~-----~~~~~~VLDiGcGsG~l~i~~~~~g~~~v~giDis~~~l~~ 157 (250)
T PRK00517 88 INIELDPGMAF---GTGT--HPTTRLCLEALEKL-----VLPGKTVLDVGCGSGILAIAAAKLGAKKVLAVDIDPQAVEA 157 (250)
T ss_pred EEEEECCCCcc---CCCC--CHHHHHHHHHHHhh-----cCCCCEEEEeCCcHHHHHHHHHHcCCCeEEEEECCHHHHHH
Confidence 45556655542 2333 66666766776543 24789999999999999999888865 59999999999999
Q ss_pred HHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHH
Q 020158 158 CAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTL 237 (330)
Q Consensus 158 ~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl 237 (330)
+++|+..|+. ...+.+... ..+||+|+++= . ...+..++..+
T Consensus 158 A~~n~~~~~~----~~~~~~~~~-------------------------------~~~fD~Vvani-~--~~~~~~l~~~~ 199 (250)
T PRK00517 158 ARENAELNGV----ELNVYLPQG-------------------------------DLKADVIVANI-L--ANPLLELAPDL 199 (250)
T ss_pred HHHHHHHcCC----CceEEEccC-------------------------------CCCcCEEEEcC-c--HHHHHHHHHHH
Confidence 9999999873 122221100 01699999752 1 33456788889
Q ss_pred HHhccCCCCeEEEEE
Q 020158 238 KRLMPLGSKKVLYLA 252 (330)
Q Consensus 238 ~~lL~~~~~~~i~va 252 (330)
.++|+++ +.++++
T Consensus 200 ~~~Lkpg--G~lils 212 (250)
T PRK00517 200 ARLLKPG--GRLILS 212 (250)
T ss_pred HHhcCCC--cEEEEE
Confidence 9999775 455554
|
|
| >PF08242 Methyltransf_12: Methyltransferase domain; InterPro: IPR013217 Methyl transfer from the ubiquitous donor S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.1e-11 Score=94.11 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=60.5
Q ss_pred EEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcccccc
Q 020158 125 LELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERY 202 (330)
Q Consensus 125 LELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~ 202 (330)
||+|||+|.....++.. ..+++++|+++.|++.+++++..+.. .......++-.+....
T Consensus 1 LdiGcG~G~~~~~l~~~~~~~~~~~~D~s~~~l~~a~~~~~~~~~-----~~~~~~~~~~~~~~~~-------------- 61 (99)
T PF08242_consen 1 LDIGCGTGRLLRALLEELPDARYTGVDISPSMLERARERLAELGN-----DNFERLRFDVLDLFDY-------------- 61 (99)
T ss_dssp -EESTTTS-TTTTHHHHC-EEEEEEEESSSSTTSTTCCCHHHCT--------EEEEE--SSS---C--------------
T ss_pred CEeCccChHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhcCC-----cceeEEEeecCChhhc--------------
Confidence 79999999988888877 78999999999999888888777542 2222222221111000
Q ss_pred ccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 203 SWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 203 ~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
...++||+|+++.|+++......+++.+.++|++|+
T Consensus 62 -------~~~~~fD~V~~~~vl~~l~~~~~~l~~~~~~L~pgG 97 (99)
T PF08242_consen 62 -------DPPESFDLVVASNVLHHLEDIEAVLRNIYRLLKPGG 97 (99)
T ss_dssp -------CC----SEEEEE-TTS--S-HHHHHHHHTTT-TSS-
T ss_pred -------ccccccceehhhhhHhhhhhHHHHHHHHHHHcCCCC
Confidence 011489999999999999999999999999998874
|
The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] Fatty acid synthase (2.3.1.85 from EC), a biosynthetic enzyme catalysing the formation of long-chain fatty acids Glycine N-methyltransferase (2.1.1.20 from EC) which catalyses the SAM-dependent methylation of glycine to form sarcosine and may play a role in regulating the methylation potential of the cell [] Enniatin synthetase, involved in non-ribosomal biosynthesis of cyclohexadepsipeptidase, enniatin [] Histamine N-methyltransferase (2.1.1.8 from EC), a SAM-dependent histamine-inactivating enzyme [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ].; PDB: 2VZ8_A 2VZ9_A. |
| >PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.8e-09 Score=98.47 Aligned_cols=122 Identities=14% Similarity=0.106 Sum_probs=80.7
Q ss_pred eEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCCCC
Q 020158 96 LQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQ 172 (330)
Q Consensus 96 ~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~ 172 (330)
.+.|+. .+++.+ ...+|.+|||+|||||..++.+++. + .+|+++|+++.||+.+++++.... .
T Consensus 32 ~~~wr~--~~~~~~-------~~~~g~~vLDv~~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~-----~ 97 (233)
T PF01209_consen 32 DRRWRR--KLIKLL-------GLRPGDRVLDVACGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREG-----L 97 (233)
T ss_dssp -----S--HHHHHH-------T--S--EEEEET-TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT------
T ss_pred HHHHHH--HHHhcc-------CCCCCCEEEEeCCChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhC-----C
Confidence 568988 444443 2356789999999999999998876 3 589999999999999999998765 2
Q ss_pred CeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 173 GSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 173 ~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.++++...|-.+..- ..+.||+|+++=.+.+....+..++.+.++|+||+. .+++.
T Consensus 98 ~~i~~v~~da~~lp~-----------------------~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~-l~ile 153 (233)
T PF01209_consen 98 QNIEFVQGDAEDLPF-----------------------PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGR-LVILE 153 (233)
T ss_dssp -SEEEEE-BTTB--S------------------------TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEE-EEEEE
T ss_pred CCeeEEEcCHHHhcC-----------------------CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeE-EEEee
Confidence 478887777554311 236899999999999988899999999999998754 33343
Q ss_pred eee
Q 020158 253 LEK 255 (330)
Q Consensus 253 ~~~ 255 (330)
..+
T Consensus 154 ~~~ 156 (233)
T PF01209_consen 154 FSK 156 (233)
T ss_dssp EEB
T ss_pred ccC
Confidence 333
|
Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C. |
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.7e-09 Score=99.09 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=96.4
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
|...-.+.+++.. .+-.|++|||+|||-|.+++.+|+. +.+|+++++|++.++.+++.+..-+. ..+++++-
T Consensus 56 AQ~~k~~~~~~kl---~L~~G~~lLDiGCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl----~~~v~v~l 128 (283)
T COG2230 56 AQRAKLDLILEKL---GLKPGMTLLDIGCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGL----EDNVEVRL 128 (283)
T ss_pred HHHHHHHHHHHhc---CCCCCCEEEEeCCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCC----CcccEEEe
Confidence 4444445666653 6678999999999999999999998 89999999999999999999988764 46899999
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCCCe
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGSKK 247 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~~~ 247 (330)
.||.+.+ ++||-|++.+.+.+... .+.+++.+.++|+++|..
T Consensus 129 ~d~rd~~--------------------------e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~ 172 (283)
T COG2230 129 QDYRDFE--------------------------EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRM 172 (283)
T ss_pred ccccccc--------------------------cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceE
Confidence 9999862 35999999999998665 999999999999887543
|
|
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.4e-09 Score=98.37 Aligned_cols=98 Identities=13% Similarity=0.031 Sum_probs=75.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++.+|||+|||+|..+..++..+.+|+++|+++.+++.++.+... ..+...|+....
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~~D~s~~~l~~a~~~~~~----------~~~~~~d~~~~~------------- 98 (251)
T PRK10258 42 KFTHVLDAGCGPGWMSRYWRERGSQVTALDLSPPMLAQARQKDAA----------DHYLAGDIESLP------------- 98 (251)
T ss_pred CCCeEEEeeCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCC----------CCEEEcCcccCc-------------
Confidence 567999999999999988888889999999999999998877421 123334433310
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
. ...+||+|+++.++.+......+++.+.++|+++ +.++++
T Consensus 99 ---------~-~~~~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~g--G~l~~~ 139 (251)
T PRK10258 99 ---------L-ATATFDLAWSNLAVQWCGNLSTALRELYRVVRPG--GVVAFT 139 (251)
T ss_pred ---------C-CCCcEEEEEECchhhhcCCHHHHHHHHHHHcCCC--eEEEEE
Confidence 0 1247999999999998888999999999999876 455554
|
|
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.2e-09 Score=98.88 Aligned_cols=98 Identities=19% Similarity=0.147 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||||||+|..+..++.. +.+|+++|+++.+++.+++++ .++.+...|-....
T Consensus 30 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~----------~~~~~~~~d~~~~~---------- 89 (258)
T PRK01683 30 ENPRYVVDLGCGPGNSTELLVERWPAARITGIDSSPAMLAEARSRL----------PDCQFVEADIASWQ---------- 89 (258)
T ss_pred cCCCEEEEEcccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhC----------CCCeEEECchhccC----------
Confidence 46789999999999999888876 579999999999999998764 12334433322110
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|+++.++++......+++.+.++|++++ .+++.
T Consensus 90 --------------~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG--~~~~~ 129 (258)
T PRK01683 90 --------------PPQALDLIFANASLQWLPDHLELFPRLVSLLAPGG--VLAVQ 129 (258)
T ss_pred --------------CCCCccEEEEccChhhCCCHHHHHHHHHHhcCCCc--EEEEE
Confidence 12479999999999888888999999999998764 44443
|
|
| >COG2813 RsmC 16S RNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.6e-09 Score=99.54 Aligned_cols=109 Identities=18% Similarity=0.350 Sum_probs=80.1
Q ss_pred HHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 107 DFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 107 ~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
+.|+++. +....+ +|||||||.|.+|+.+|+.. .+|+++|.+..+++.+++|+..|.. .+..+..-+-..
T Consensus 148 ~lLl~~l--~~~~~~-~vlDlGCG~Gvlg~~la~~~p~~~vtmvDvn~~Av~~ar~Nl~~N~~-----~~~~v~~s~~~~ 219 (300)
T COG2813 148 RLLLETL--PPDLGG-KVLDLGCGYGVLGLVLAKKSPQAKLTLVDVNARAVESARKNLAANGV-----ENTEVWASNLYE 219 (300)
T ss_pred HHHHHhC--CccCCC-cEEEeCCCccHHHHHHHHhCCCCeEEEEecCHHHHHHHHHhHHHcCC-----CccEEEEecccc
Confidence 3444443 344455 99999999999999999995 6999999999999999999999984 222333322222
Q ss_pred CCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc-----cHHHHHHHHHHhccCCCCeE
Q 020158 185 PWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD-----LTDALFHTLKRLMPLGSKKV 248 (330)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~-----~~~~l~~tl~~lL~~~~~~~ 248 (330)
. + .++||+||++-.++.-. ....+++...+.|++|+...
T Consensus 220 ~-----------------------v--~~kfd~IisNPPfh~G~~v~~~~~~~~i~~A~~~L~~gGeL~ 263 (300)
T COG2813 220 P-----------------------V--EGKFDLIISNPPFHAGKAVVHSLAQEIIAAAARHLKPGGELW 263 (300)
T ss_pred c-----------------------c--cccccEEEeCCCccCCcchhHHHHHHHHHHHHHhhccCCEEE
Confidence 1 1 23899999999998743 33478899999998875533
|
|
| >PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3e-09 Score=96.51 Aligned_cols=116 Identities=10% Similarity=0.140 Sum_probs=89.3
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.+|+.... ...++++|||||||+|..+..+++.+.+|+++|.++.+++.++.|+..+. ..+.+...++...
T Consensus 37 ~~~l~~~~---~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~------~~~~~~~~~~~~~ 107 (233)
T PRK05134 37 LNYIREHA---GGLFGKRVLDVGCGGGILSESMARLGADVTGIDASEENIEVARLHALESG------LKIDYRQTTAEEL 107 (233)
T ss_pred HHHHHHhc---cCCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEcCCHHHHHHHHHHHHHcC------CceEEEecCHHHh
Confidence 45665553 34678999999999999999999888899999999999999999987754 2345555555432
Q ss_pred CCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 186 WPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
.. ...++||+|+++.++.+......+++.+.++|+++ +.++++..
T Consensus 108 ~~----------------------~~~~~fD~Ii~~~~l~~~~~~~~~l~~~~~~L~~g--G~l~v~~~ 152 (233)
T PRK05134 108 AA----------------------EHPGQFDVVTCMEMLEHVPDPASFVRACAKLVKPG--GLVFFSTL 152 (233)
T ss_pred hh----------------------hcCCCccEEEEhhHhhccCCHHHHHHHHHHHcCCC--cEEEEEec
Confidence 10 01258999999999999888999999999999776 44555543
|
|
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=99.05 E-value=3e-09 Score=106.64 Aligned_cols=104 Identities=15% Similarity=0.124 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
-++.+|||+|||+|..++.++.. +.+|+++|+++.+++.+++|.... ..++.+...|+.....
T Consensus 265 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvDiS~~~l~~A~~~~~~~------~~~v~~~~~d~~~~~~---------- 328 (475)
T PLN02336 265 KPGQKVLDVGCGIGGGDFYMAENFDVHVVGIDLSVNMISFALERAIGR------KCSVEFEVADCTKKTY---------- 328 (475)
T ss_pred CCCCEEEEEeccCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHhhcC------CCceEEEEcCcccCCC----------
Confidence 35789999999999999888875 779999999999999999887522 3467888888765411
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
...+||+|++.+++++....+.+++.+.++|+++ +.+++..
T Consensus 329 -------------~~~~fD~I~s~~~l~h~~d~~~~l~~~~r~Lkpg--G~l~i~~ 369 (475)
T PLN02336 329 -------------PDNSFDVIYSRDTILHIQDKPALFRSFFKWLKPG--GKVLISD 369 (475)
T ss_pred -------------CCCCEEEEEECCcccccCCHHHHHHHHHHHcCCC--eEEEEEE
Confidence 1247999999999999999999999999999876 4455543
|
|
| >PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.1e-10 Score=89.78 Aligned_cols=100 Identities=17% Similarity=0.100 Sum_probs=78.9
Q ss_pred CCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 121 GIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
|.+|||+|||+|...+.+++.+ .++++.|+++..++.++.|+..+.. ..++.+...|+.+..+.
T Consensus 1 g~~vlD~~~G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~----~~~~~~~~~D~~~~~~~----------- 65 (117)
T PF13659_consen 1 GDRVLDPGCGSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGL----DDRVEVIVGDARDLPEP----------- 65 (117)
T ss_dssp TEEEEEETSTTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTT----TTTEEEEESHHHHHHHT-----------
T ss_pred CCEEEEcCcchHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccC----CceEEEEECchhhchhh-----------
Confidence 5689999999999999999998 9999999999999999999999874 36788888887653100
Q ss_pred cccccCccchhccCCeeEEEEeccccCc--------ccHHHHHHHHHHhccCCC
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSD--------DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~--------~~~~~l~~tl~~lL~~~~ 245 (330)
....+||+|+++-..... .....+++.+.++|++++
T Consensus 66 ----------~~~~~~D~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG 109 (117)
T PF13659_consen 66 ----------LPDGKFDLIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPGG 109 (117)
T ss_dssp ----------CTTT-EEEEEE--STTSBTT----GGCHHHHHHHHHHHHEEEEE
T ss_pred ----------ccCceeEEEEECCCCccccccchhhHHHHHHHHHHHHHHcCCCe
Confidence 123689999998777642 256788999999998763
|
... |
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=3e-09 Score=98.83 Aligned_cols=113 Identities=9% Similarity=0.070 Sum_probs=83.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
+++--+..++... ..-++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++.+... ..++.+..
T Consensus 36 gg~~~~~~~l~~l---~l~~~~~VLDiGcG~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~-------~~~i~~~~ 105 (263)
T PTZ00098 36 GGIEATTKILSDI---ELNENSKVLDIGSGLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSD-------KNKIEFEA 105 (263)
T ss_pred CchHHHHHHHHhC---CCCCCCEEEEEcCCCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCc-------CCceEEEE
Confidence 3333344444442 4456789999999999988888764 67999999999999999987643 24577777
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCC
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~ 246 (330)
.|..+.. . ...+||+|++.+++++.. ....+++.+.++|++++.
T Consensus 106 ~D~~~~~----------------------~-~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~ 151 (263)
T PTZ00098 106 NDILKKD----------------------F-PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGI 151 (263)
T ss_pred CCcccCC----------------------C-CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcE
Confidence 7655321 0 125799999999987753 778999999999988643
|
|
| >TIGR02021 BchM-ChlM magnesium protoporphyrin O-methyltransferase | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.4e-09 Score=96.45 Aligned_cols=95 Identities=19% Similarity=0.210 Sum_probs=75.2
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++.+|||+|||+|..+..++..+.+|+++|+++.++..+++++..+.. ..++.+...|+...
T Consensus 53 ~~~~~~vLDiGcG~G~~~~~la~~~~~v~gvD~s~~~i~~a~~~~~~~~~----~~~i~~~~~d~~~~------------ 116 (219)
T TIGR02021 53 PLKGKRVLDAGCGTGLLSIELAKRGAIVKAVDISEQMVQMARNRAQGRDV----AGNVEFEVNDLLSL------------ 116 (219)
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEECChhhC------------
Confidence 46789999999999999999998888999999999999999999977653 24577777665543
Q ss_pred cccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhcc
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMP 242 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~ 242 (330)
..+||+|++++++++. .....+++.+.++++
T Consensus 117 --------------~~~fD~ii~~~~l~~~~~~~~~~~l~~i~~~~~ 149 (219)
T TIGR02021 117 --------------CGEFDIVVCMDVLIHYPASDMAKALGHLASLTK 149 (219)
T ss_pred --------------CCCcCEEEEhhHHHhCCHHHHHHHHHHHHHHhC
Confidence 1479999999998764 335566666766663
|
This model represents the S-adenosylmethionine-dependent O-methyltransferase responsible for methylation of magnesium protoporphyrin IX. This step is essentiasl for the biosynthesis of both chlorophyll and bacteriochlorophyll. This model encompasses two closely related clades, from cyanobacteria (and plants) where it is called ChlM and other photosynthetic bacteria where it is known as BchM. |
| >PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2e-09 Score=103.59 Aligned_cols=95 Identities=18% Similarity=0.199 Sum_probs=73.1
Q ss_pred CCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
..+|||||||+|..++.+++.. .+|+++|+++.+++.++.|+..|+. ...+...|....
T Consensus 197 ~g~VLDlGCG~G~ls~~la~~~p~~~v~~vDis~~Al~~A~~nl~~n~l------~~~~~~~D~~~~------------- 257 (342)
T PRK09489 197 KGKVLDVGCGAGVLSAVLARHSPKIRLTLSDVSAAALESSRATLAANGL------EGEVFASNVFSD------------- 257 (342)
T ss_pred CCeEEEeccCcCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCEEEEcccccc-------------
Confidence 3479999999999999999874 5899999999999999999999873 123333332211
Q ss_pred ccccccCccchhccCCeeEEEEeccccC-----cccHHHHHHHHHHhccCCCC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYS-----DDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~-----~~~~~~l~~tl~~lL~~~~~ 246 (330)
..++||+|+++-.+++ ....+.+++.+.++|++++.
T Consensus 258 ------------~~~~fDlIvsNPPFH~g~~~~~~~~~~~i~~a~~~LkpgG~ 298 (342)
T PRK09489 258 ------------IKGRFDMIISNPPFHDGIQTSLDAAQTLIRGAVRHLNSGGE 298 (342)
T ss_pred ------------cCCCccEEEECCCccCCccccHHHHHHHHHHHHHhcCcCCE
Confidence 1257999999877764 34568899999999988643
|
|
| >TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.6e-09 Score=95.80 Aligned_cols=99 Identities=15% Similarity=0.045 Sum_probs=79.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++.|+..+. ..++.+...|..+...
T Consensus 44 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~-------- 110 (231)
T TIGR02752 44 QAGTSALDVCCGTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAG-----LHNVELVHGNAMELPF-------- 110 (231)
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcC-----CCceEEEEechhcCCC--------
Confidence 45789999999999999988875 3599999999999999999987655 2456666666543210
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
..++||+|+++.++.+......+++.+.++|++++
T Consensus 111 ---------------~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG 145 (231)
T TIGR02752 111 ---------------DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGG 145 (231)
T ss_pred ---------------CCCCccEEEEecccccCCCHHHHHHHHHHHcCcCe
Confidence 12479999999988888888899999999998764
|
MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species. |
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-08 Score=82.83 Aligned_cols=97 Identities=13% Similarity=0.180 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++. .++.+...+.....+.
T Consensus 18 ~~~~~vldlG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~~~~~-------- 84 (124)
T TIGR02469 18 RPGDVLWDIGAGSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGV-----SNIVIVEGDAPEALED-------- 84 (124)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCC-----CceEEEeccccccChh--------
Confidence 45789999999999999999886 46899999999999999999988753 3456655553321100
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
...+||+|+.... ......+++.+.++|++++
T Consensus 85 --------------~~~~~D~v~~~~~---~~~~~~~l~~~~~~Lk~gG 116 (124)
T TIGR02469 85 --------------SLPEPDRVFIGGS---GGLLQEILEAIWRRLRPGG 116 (124)
T ss_pred --------------hcCCCCEEEECCc---chhHHHHHHHHHHHcCCCC
Confidence 1247999997543 3355789999999998764
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.8e-09 Score=98.23 Aligned_cols=99 Identities=20% Similarity=0.181 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
-.|.+|||+|||+|..++.+++. + .+|+++|+++.+++.+++|+..++. .++.+...++.+..
T Consensus 76 ~~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~-----~~v~~~~~d~~~l~--------- 141 (272)
T PRK11873 76 KPGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGY-----TNVEFRLGEIEALP--------- 141 (272)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCC-----CCEEEEEcchhhCC---------
Confidence 46889999999999988877765 3 4799999999999999999987652 45666666654421
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
+ ..+.||+|++.-++++......+++.+.++|++++
T Consensus 142 -------------~-~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG 177 (272)
T PRK11873 142 -------------V-ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGG 177 (272)
T ss_pred -------------C-CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCc
Confidence 0 12479999999898888888899999999998864
|
|
| >PLN02233 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.4e-09 Score=97.59 Aligned_cols=103 Identities=16% Similarity=0.031 Sum_probs=79.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++.+|||+|||||..++.+++. + .+|+++|++++|++.++++........ ..++.+...|..+..-
T Consensus 72 ~~~~~VLDlGcGtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~--~~~i~~~~~d~~~lp~-------- 141 (261)
T PLN02233 72 KMGDRVLDLCCGSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSC--YKNIEWIEGDATDLPF-------- 141 (261)
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhcc--CCCeEEEEcccccCCC--------
Confidence 45789999999999999888875 3 589999999999999987764321100 2457777766544210
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
..+.||+|+++.++.+......+++.+.++|++|+.
T Consensus 142 ---------------~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~ 177 (261)
T PLN02233 142 ---------------DDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSR 177 (261)
T ss_pred ---------------CCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcE
Confidence 124799999999999988999999999999988743
|
|
| >COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.1e-09 Score=98.77 Aligned_cols=58 Identities=26% Similarity=0.274 Sum_probs=49.9
Q ss_pred eEEEEcCccCHHHHHHHHhCC--eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 123 ISLELGAGTGLAGILLSRVAW--TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 123 ~VLELG~GtGL~gl~lA~~~~--~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
+|||||||+|.+++.+|+.+. +|++||+|+++++.+++|+..|+. .++.+...||...
T Consensus 113 ~ilDlGTGSG~iai~la~~~~~~~V~a~Dis~~Al~~A~~Na~~~~l-----~~~~~~~~dlf~~ 172 (280)
T COG2890 113 RILDLGTGSGAIAIALAKEGPDAEVIAVDISPDALALARENAERNGL-----VRVLVVQSDLFEP 172 (280)
T ss_pred cEEEecCChHHHHHHHHhhCcCCeEEEEECCHHHHHHHHHHHHHcCC-----ccEEEEeeecccc
Confidence 899999999999999999864 999999999999999999999984 3344444488876
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.6e-09 Score=98.03 Aligned_cols=113 Identities=16% Similarity=0.165 Sum_probs=86.2
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
|-....+++++.. ..-.|.+|||||||.|-+++.+|+. |.+|++..++++..+.+++.+...+. ...+.+..
T Consensus 46 AQ~~k~~~~~~~~---~l~~G~~vLDiGcGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl----~~~v~v~~ 118 (273)
T PF02353_consen 46 AQERKLDLLCEKL---GLKPGDRVLDIGCGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGL----EDRVEVRL 118 (273)
T ss_dssp HHHHHHHHHHTTT---T--TT-EEEEES-TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTS----SSTEEEEE
T ss_pred HHHHHHHHHHHHh---CCCCCCEEEEeCCCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEE
Confidence 4455566777664 5668999999999999999999998 99999999999999999999987664 46788888
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCC
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~ 246 (330)
.||.+. ..+||-|++-+++.+. ...+.+++.+.++|+|++.
T Consensus 119 ~D~~~~--------------------------~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~ 161 (273)
T PF02353_consen 119 QDYRDL--------------------------PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGR 161 (273)
T ss_dssp S-GGG-----------------------------S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEE
T ss_pred eecccc--------------------------CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcE
Confidence 888753 1389999999999886 6789999999999988743
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes | Back alignment and domain information |
|---|
Probab=99.00 E-value=4e-09 Score=95.03 Aligned_cols=96 Identities=15% Similarity=0.061 Sum_probs=80.0
Q ss_pred CeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 122 IISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++|||+|||+|..++.+++. +.+|+++|+++++++.++.|+..++. ..++.+...|.....
T Consensus 1 ~~vLDiGcG~G~~~~~la~~~~~~~v~gid~s~~~~~~a~~~~~~~gl----~~~i~~~~~d~~~~~------------- 63 (224)
T smart00828 1 KRVLDFGCGYGSDLIDLAERHPHLQLHGYTISPEQAEVGRERIRALGL----QGRIRIFYRDSAKDP------------- 63 (224)
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC----CcceEEEecccccCC-------------
Confidence 57999999999998888876 36899999999999999999987653 456788777764431
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
..++||+|++..++++....+.+++.+.++|++++
T Consensus 64 -----------~~~~fD~I~~~~~l~~~~~~~~~l~~~~~~LkpgG 98 (224)
T smart00828 64 -----------FPDTYDLVFGFEVIHHIKDKMDLFSNISRHLKDGG 98 (224)
T ss_pred -----------CCCCCCEeehHHHHHhCCCHHHHHHHHHHHcCCCC
Confidence 12479999999999998889999999999998864
|
|
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.7e-09 Score=96.82 Aligned_cols=92 Identities=15% Similarity=0.100 Sum_probs=72.5
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
...+.+|||||||+|..+..++.. +.+|+++|+++.|++.++.+ ++.+...|..+.
T Consensus 27 ~~~~~~vLDlGcG~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~------------~~~~~~~d~~~~---------- 84 (255)
T PRK14103 27 AERARRVVDLGCGPGNLTRYLARRWPGAVIEALDSSPEMVAAARER------------GVDARTGDVRDW---------- 84 (255)
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhc------------CCcEEEcChhhC----------
Confidence 346789999999999999999887 67999999999999988642 133444332211
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
....+||+|+++.++++......+++.+.++|++|+
T Consensus 85 --------------~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG 120 (255)
T PRK14103 85 --------------KPKPDTDVVVSNAALQWVPEHADLLVRWVDELAPGS 120 (255)
T ss_pred --------------CCCCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCc
Confidence 012479999999999998888999999999998864
|
|
| >PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.8e-09 Score=85.18 Aligned_cols=92 Identities=20% Similarity=0.222 Sum_probs=69.3
Q ss_pred EEEEcCccCHHHHHHHHhC-----CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 124 SLELGAGTGLAGILLSRVA-----WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 124 VLELG~GtGL~gl~lA~~~-----~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
|||||||+|-....++... .++++.|+++++|+.++++..... .++++...|..+.
T Consensus 1 ILDlgcG~G~~~~~l~~~~~~~~~~~~~gvD~s~~~l~~~~~~~~~~~------~~~~~~~~D~~~l------------- 61 (101)
T PF13649_consen 1 ILDLGCGTGRVTRALARRFDAGPSSRVIGVDISPEMLELAKKRFSEDG------PKVRFVQADARDL------------- 61 (101)
T ss_dssp -EEET-TTSHHHHHHHHHS-----SEEEEEES-HHHHHHHHHHSHHTT------TTSEEEESCTTCH-------------
T ss_pred CEEeecCCcHHHHHHHHHhhhcccceEEEEECCHHHHHHHHHhchhcC------CceEEEECCHhHC-------------
Confidence 7999999999999888874 799999999999999999998743 3677777776542
Q ss_pred ccccccCccchhccCCeeEEEEecc-ccC--cccHHHHHHHHHHhccCC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADV-IYS--DDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDv-iY~--~~~~~~l~~tl~~lL~~~ 244 (330)
....++||+|+++.. +.+ +.....+++.+.++++++
T Consensus 62 ----------~~~~~~~D~v~~~~~~~~~~~~~~~~~ll~~~~~~l~pg 100 (101)
T PF13649_consen 62 ----------PFSDGKFDLVVCSGLSLHHLSPEELEALLRRIARLLRPG 100 (101)
T ss_dssp ----------HHHSSSEEEEEE-TTGGGGSSHHHHHHHHHHHHHTEEEE
T ss_pred ----------cccCCCeeEEEEcCCccCCCCHHHHHHHHHHHHHHhCCC
Confidence 013458999999655 443 457788999999999765
|
|
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.4e-08 Score=91.38 Aligned_cols=111 Identities=13% Similarity=0.006 Sum_probs=83.6
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
..+-+.++... ...++.+|||+|||+|..+..++.. ..+|+++|.++.+++.++++.... ..++.+..
T Consensus 5 ~~~~~~~~~~~---~~~~~~~vLdiG~G~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~------~~~~~~~~ 75 (241)
T PRK08317 5 RRYRARTFELL---AVQPGDRVLDVGCGPGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGL------GPNVEFVR 75 (241)
T ss_pred HHHHHHHHHHc---CCCCCCEEEEeCCCCCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCC------CCceEEEe
Confidence 33444444442 4456889999999999999888876 368999999999999999883322 24566666
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
.|...... ....||+|++..++.+......+++.+.++|++++
T Consensus 76 ~d~~~~~~-----------------------~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG 118 (241)
T PRK08317 76 GDADGLPF-----------------------PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGG 118 (241)
T ss_pred cccccCCC-----------------------CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCc
Confidence 66543210 12579999999999998889999999999998864
|
|
| >TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.4e-09 Score=91.98 Aligned_cols=93 Identities=16% Similarity=0.253 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++.|.. .+.+...+..++.
T Consensus 42 ~~~~~VLDiGCG~G~~~~~L~~~~~~~~v~giDiS~~~l~~A~~~~~----------~~~~~~~d~~~~~---------- 101 (204)
T TIGR03587 42 PKIASILELGANIGMNLAALKRLLPFKHIYGVEINEYAVEKAKAYLP----------NINIIQGSLFDPF---------- 101 (204)
T ss_pred CCCCcEEEEecCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHhhCC----------CCcEEEeeccCCC----------
Confidence 46779999999999999988876 5799999999999999987641 2333444433310
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
..++||+|++..++++.. .+.+.+.+.++.+..++
T Consensus 102 --------------~~~sfD~V~~~~vL~hl~-p~~~~~~l~el~r~~~~ 136 (204)
T TIGR03587 102 --------------KDNFFDLVLTKGVLIHIN-PDNLPTAYRELYRCSNR 136 (204)
T ss_pred --------------CCCCEEEEEECChhhhCC-HHHHHHHHHHHHhhcCc
Confidence 135799999999998753 34444555555544333
|
Members of this small clade are methyltransferases of the pfam08241 family and are observed within operons for the biosynthesis of pseudaminic acid, a component of exopolysaccharide and flagellin glycosyl modifications. Notable among these genomes is Pseudomonas fluorescens PfO-1. Possibly one of the two hydroxyl groups of pseudaminic acid, at positions 4 and 8 is converted to a methoxy group by this enzyme |
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4e-09 Score=91.80 Aligned_cols=64 Identities=25% Similarity=0.261 Sum_probs=56.4
Q ss_pred CCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 116 SSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 116 ~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
..+++|++|+|||||||.+|+.++.+| .+|++.|+++++++.++.|+..+ .+.+.+..-|-.+.
T Consensus 41 ~g~l~g~~V~DlG~GTG~La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l------~g~v~f~~~dv~~~ 105 (198)
T COG2263 41 RGDLEGKTVLDLGAGTGILAIGAALLGASRVLAVDIDPEALEIARANAEEL------LGDVEFVVADVSDF 105 (198)
T ss_pred cCCcCCCEEEEcCCCcCHHHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhh------CCceEEEEcchhhc
Confidence 478999999999999999999999997 79999999999999999999984 37788877775554
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.6e-09 Score=92.42 Aligned_cols=112 Identities=13% Similarity=0.159 Sum_probs=79.1
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC---eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW---TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~---~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
.+..+..++.+.. ...++.+|||+|||+|..++.+|+... +|++.|+++++++.+++|+..++. .++++
T Consensus 61 ~~p~~~~~~~~~l---~~~~~~~VLDiG~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~-----~~v~~ 132 (215)
T TIGR00080 61 SAPHMVAMMTELL---ELKPGMKVLEIGTGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGL-----DNVIV 132 (215)
T ss_pred chHHHHHHHHHHh---CCCCcCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCC-----CCeEE
Confidence 3344444555443 445789999999999999999998843 499999999999999999998763 56777
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
...|..+..+ ...+||+|+..... ..+.+.+.+.|++++ .+++
T Consensus 133 ~~~d~~~~~~-----------------------~~~~fD~Ii~~~~~------~~~~~~~~~~L~~gG--~lv~ 175 (215)
T TIGR00080 133 IVGDGTQGWE-----------------------PLAPYDRIYVTAAG------PKIPEALIDQLKEGG--ILVM 175 (215)
T ss_pred EECCcccCCc-----------------------ccCCCCEEEEcCCc------ccccHHHHHhcCcCc--EEEE
Confidence 7777554311 12479999976443 223455777887764 4444
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK07580 Mg-protoporphyrin IX methyl transferase; Validated | Back alignment and domain information |
|---|
Probab=98.98 E-value=8.4e-09 Score=93.06 Aligned_cols=94 Identities=18% Similarity=0.270 Sum_probs=71.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++.+|||+|||+|..+..+++.+.+|+++|.++.+++.++++...++. ..++.+...|+...
T Consensus 61 ~~~~~~vLDvGcG~G~~~~~l~~~~~~v~~~D~s~~~i~~a~~~~~~~~~----~~~i~~~~~d~~~~------------ 124 (230)
T PRK07580 61 DLTGLRILDAGCGVGSLSIPLARRGAKVVASDISPQMVEEARERAPEAGL----AGNITFEVGDLESL------------ 124 (230)
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC----ccCcEEEEcCchhc------------
Confidence 35678999999999999999998888999999999999999999876542 24567776663321
Q ss_pred cccccccCccchhccCCeeEEEEeccccC--cccHHHHHHHHHHhc
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYS--DDLTDALFHTLKRLM 241 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL 241 (330)
.+.||+|++.+++++ ......+++.+.+++
T Consensus 125 --------------~~~fD~v~~~~~l~~~~~~~~~~~l~~l~~~~ 156 (230)
T PRK07580 125 --------------LGRFDTVVCLDVLIHYPQEDAARMLAHLASLT 156 (230)
T ss_pred --------------cCCcCEEEEcchhhcCCHHHHHHHHHHHHhhc
Confidence 247999999999855 234455556665554
|
|
| >PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.5e-08 Score=91.43 Aligned_cols=99 Identities=17% Similarity=0.063 Sum_probs=81.6
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
++.+|||+|||+|..++.++..+ .+|+++|+++.+++.+++|+..+.. ..++.+...|+.+...
T Consensus 51 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~~--------- 117 (239)
T PRK00216 51 PGDKVLDLACGTGDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGL----SGNVEFVQGDAEALPF--------- 117 (239)
T ss_pred CCCeEEEeCCCCCHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhccccc----ccCeEEEecccccCCC---------
Confidence 57899999999999999988875 7999999999999999999876542 3567777777655311
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
....||+|+++-++.+......+++.+.++|++++
T Consensus 118 --------------~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG 152 (239)
T PRK00216 118 --------------PDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGG 152 (239)
T ss_pred --------------CCCCccEEEEecccccCCCHHHHHHHHHHhccCCc
Confidence 12479999999999998899999999999998763
|
|
| >PRK10909 rsmD 16S rRNA m(2)G966-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.6e-09 Score=93.05 Aligned_cols=110 Identities=17% Similarity=0.207 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCccCHHHHHH-HHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILL-SRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~l-A~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..+.+|||||||+|..|+.+ ++.+.+|++.|.++.+++.+++|++.|+. .++.+...|+.+..+
T Consensus 52 ~~~~~vLDl~~GsG~l~l~~lsr~a~~V~~vE~~~~a~~~a~~Nl~~~~~-----~~v~~~~~D~~~~l~---------- 116 (199)
T PRK10909 52 IVDARCLDCFAGSGALGLEALSRYAAGATLLEMDRAVAQQLIKNLATLKA-----GNARVVNTNALSFLA---------- 116 (199)
T ss_pred cCCCEEEEcCCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCC-----CcEEEEEchHHHHHh----------
Confidence 46789999999999999964 44467999999999999999999999873 467777777654210
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHh--ccCCCCeEEEEEeeeeCc
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRL--MPLGSKKVLYLALEKRYN 258 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~l--L~~~~~~~i~va~~~R~~ 258 (330)
.....||+|+..-. |.....+.+++.|... + .+++++|+.+.++..
T Consensus 117 ------------~~~~~fDlV~~DPP-y~~g~~~~~l~~l~~~~~l--~~~~iv~ve~~~~~~ 164 (199)
T PRK10909 117 ------------QPGTPHNVVFVDPP-FRKGLLEETINLLEDNGWL--ADEALIYVESEVENG 164 (199)
T ss_pred ------------hcCCCceEEEECCC-CCCChHHHHHHHHHHCCCc--CCCcEEEEEecCCCC
Confidence 01236999986555 7778888888888773 4 346789988766544
|
|
| >PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=9.4e-09 Score=94.52 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=79.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHh----CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV----AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~----~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.+.+|||||||+|..++.+++. +.+|+++|.++.|++.+++|+..++. ..++.+...+..+.
T Consensus 56 ~~~~vLDlGcGtG~~~~~l~~~~~~~~~~v~gvD~S~~ml~~A~~~~~~~~~----~~~v~~~~~d~~~~---------- 121 (247)
T PRK15451 56 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA----PTPVDVIEGDIRDI---------- 121 (247)
T ss_pred CCCEEEEEcccCCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCC----CCCeEEEeCChhhC----------
Confidence 5689999999999998888763 47999999999999999999987653 34677777665432
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
....+|+|+++-++++.. ....+++.+.+.|++| +.++++.
T Consensus 122 ---------------~~~~~D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpG--G~l~l~e 164 (247)
T PRK15451 122 ---------------AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPG--GALVLSE 164 (247)
T ss_pred ---------------CCCCCCEEehhhHHHhCCHHHHHHHHHHHHHhcCCC--CEEEEEE
Confidence 113589999988776543 3468999999999876 4555554
|
|
| >PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB | Back alignment and domain information |
|---|
Probab=98.97 E-value=9.1e-09 Score=90.90 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=76.6
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..+++.++||||||.|--++.+|++|..|++.|.++..++.+++-++.++ -.+++...|..+..
T Consensus 27 ~~~~~g~~LDlgcG~GRNalyLA~~G~~VtAvD~s~~al~~l~~~a~~~~------l~i~~~~~Dl~~~~---------- 90 (192)
T PF03848_consen 27 PLLKPGKALDLGCGEGRNALYLASQGFDVTAVDISPVALEKLQRLAEEEG------LDIRTRVADLNDFD---------- 90 (192)
T ss_dssp TTS-SSEEEEES-TTSHHHHHHHHTT-EEEEEESSHHHHHHHHHHHHHTT-------TEEEEE-BGCCBS----------
T ss_pred hhcCCCcEEEcCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHHHhhcC------ceeEEEEecchhcc----------
Confidence 45678899999999999999999999999999999999999988777665 34777777765531
Q ss_pred ccccccccCccchhccCCeeEEEEeccccC--cccHHHHHHHHHHhccCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYS--DDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL~~~~ 245 (330)
..+.||+|++.-|+++ .+..+.+++.++..+++|+
T Consensus 91 --------------~~~~yD~I~st~v~~fL~~~~~~~i~~~m~~~~~pGG 127 (192)
T PF03848_consen 91 --------------FPEEYDFIVSTVVFMFLQRELRPQIIENMKAATKPGG 127 (192)
T ss_dssp ---------------TTTEEEEEEESSGGGS-GGGHHHHHHHHHHTEEEEE
T ss_pred --------------ccCCcCEEEEEEEeccCCHHHHHHHHHHHHhhcCCcE
Confidence 1247999998766655 5678889999999998764
|
When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A. |
| >PLN02490 MPBQ/MSBQ methyltransferase | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.1e-08 Score=96.18 Aligned_cols=96 Identities=16% Similarity=0.160 Sum_probs=75.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||||||+|..++.+++. +.+|+++|.++.|++.+++|... .++.+...|..+..
T Consensus 113 ~~~~VLDLGcGtG~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~--------~~i~~i~gD~e~lp----------- 173 (340)
T PLN02490 113 RNLKVVDVGGGTGFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPL--------KECKIIEGDAEDLP----------- 173 (340)
T ss_pred CCCEEEEEecCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhc--------cCCeEEeccHHhCC-----------
Confidence 5679999999999999888775 47999999999999999988642 23455555544321
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
. ..+.||+|+++.++++....+.+++.+.++|++++.
T Consensus 174 -----------~-~~~sFDvVIs~~~L~~~~d~~~~L~e~~rvLkPGG~ 210 (340)
T PLN02490 174 -----------F-PTDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGK 210 (340)
T ss_pred -----------C-CCCceeEEEEcChhhhCCCHHHHHHHHHHhcCCCcE
Confidence 0 125799999999998888888999999999988643
|
|
| >TIGR02072 BioC biotin biosynthesis protein BioC | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.3e-08 Score=91.64 Aligned_cols=100 Identities=16% Similarity=0.105 Sum_probs=77.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++++|||||||+|..+..+++.+ .+|+++|.++.++..++.+.. .++.+...|..+...
T Consensus 33 ~~~~~vLDlG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~---------~~~~~~~~d~~~~~~--------- 94 (240)
T TIGR02072 33 FIPASVLDIGCGTGYLTRALLKRFPQAEFIALDISAGMLAQAKTKLS---------ENVQFICGDAEKLPL--------- 94 (240)
T ss_pred CCCCeEEEECCCccHHHHHHHHhCCCCcEEEEeChHHHHHHHHHhcC---------CCCeEEecchhhCCC---------
Confidence 556899999999999999998875 568999999999988876553 234555555443210
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|+++.++++......+++.+.++|+++ +.++++
T Consensus 95 --------------~~~~fD~vi~~~~l~~~~~~~~~l~~~~~~L~~~--G~l~~~ 134 (240)
T TIGR02072 95 --------------EDSSFDLIVSNLALQWCDDLSQALSELARVLKPG--GLLAFS 134 (240)
T ss_pred --------------CCCceeEEEEhhhhhhccCHHHHHHHHHHHcCCC--cEEEEE
Confidence 1247999999999999888999999999999876 344443
|
This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology. |
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.3e-08 Score=88.42 Aligned_cols=112 Identities=15% Similarity=0.156 Sum_probs=78.9
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
..+..++.+.. ....+.+|||+|||+|..+..+++. +.+|++.|+++.+++.+++|+..++. ..++++..
T Consensus 58 p~~~~~~~~~l---~~~~~~~VLDiG~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~----~~~v~~~~ 130 (205)
T PRK13944 58 PHMVAMMCELI---EPRPGMKILEVGTGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGY----WGVVEVYH 130 (205)
T ss_pred HHHHHHHHHhc---CCCCCCEEEEECcCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCC----CCcEEEEE
Confidence 33445555442 3346789999999999999888876 36999999999999999999988763 24577777
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.|..+..+ ...+||+|++.-.+. .+.+.+.+.|++++ .+++.
T Consensus 131 ~d~~~~~~-----------------------~~~~fD~Ii~~~~~~------~~~~~l~~~L~~gG--~lvi~ 172 (205)
T PRK13944 131 GDGKRGLE-----------------------KHAPFDAIIVTAAAS------TIPSALVRQLKDGG--VLVIP 172 (205)
T ss_pred CCcccCCc-----------------------cCCCccEEEEccCcc------hhhHHHHHhcCcCc--EEEEE
Confidence 77544311 124799999886654 23356677887663 44443
|
|
| >TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.8e-08 Score=90.62 Aligned_cols=125 Identities=16% Similarity=0.194 Sum_probs=91.3
Q ss_pred chHHHHHHHHhhhcCC-CCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEE
Q 020158 100 KAELVLADFVMHKMCT-SSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVR 178 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~-~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~ 178 (330)
........|+...... ....++.+|||+|||+|..+..+++.+.+|+++|.++.+++.++.|+..+.. .++.+.
T Consensus 24 ~~~~~~~~~i~~~~~~~~~~~~~~~vLdlG~G~G~~~~~l~~~~~~v~~iD~s~~~~~~a~~~~~~~~~-----~~~~~~ 98 (224)
T TIGR01983 24 KMNPLRLDYIRDTIRKNKKPLFGLRVLDVGCGGGLLSEPLARLGANVTGIDASEENIEVAKLHAKKDPL-----LKIEYR 98 (224)
T ss_pred HhhHHHHHHHHHHHHhcccCCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCC-----CceEEE
Confidence 3334445666554311 1235688999999999999998888888899999999999999999987652 245555
Q ss_pred EecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 179 DLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 179 ~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
..++.+... ....+||+|+++.++++......+++.+.++|+++ +.++++.
T Consensus 99 ~~d~~~~~~----------------------~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~~g--G~l~i~~ 149 (224)
T TIGR01983 99 CTSVEDLAE----------------------KGAKSFDVVTCMEVLEHVPDPQAFIRACAQLLKPG--GILFFST 149 (224)
T ss_pred eCCHHHhhc----------------------CCCCCccEEEehhHHHhCCCHHHHHHHHHHhcCCC--cEEEEEe
Confidence 555433210 01257999999999999999999999999999775 4455543
|
This model represents an O-methyltransferase believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and fungi (COQ3). A separate methylase (MenG/UbiE) catalyzes the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase. |
| >TIGR00740 methyltransferase, putative | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.7e-08 Score=92.10 Aligned_cols=107 Identities=15% Similarity=0.113 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh----CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV----AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~----~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
..+.+|||||||+|..++.+++. +.+|++.|+++.|++.+++++..... ..++.+...|+.+..
T Consensus 52 ~~~~~iLDlGcG~G~~~~~l~~~~~~p~~~v~gvD~s~~ml~~a~~~~~~~~~----~~~v~~~~~d~~~~~-------- 119 (239)
T TIGR00740 52 TPDSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHS----EIPVEILCNDIRHVE-------- 119 (239)
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHHHHhcCC----CCCeEEEECChhhCC--------
Confidence 36679999999999999888874 46899999999999999999876432 246777777766531
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
...+|+|+++.++.+.. ....+++.+.+.|+++ +.++++-..+
T Consensus 120 -----------------~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~Lkpg--G~l~i~d~~~ 164 (239)
T TIGR00740 120 -----------------IKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPN--GVLVLSEKFR 164 (239)
T ss_pred -----------------CCCCCEEeeecchhhCCHHHHHHHHHHHHHhcCCC--eEEEEeeccc
Confidence 13589999988887643 4577999999999776 4566654333
|
A simple BLAST search finds all members of this family and weaker hits to a large number of known and predicted methyltransferases. A single iteration with PSI-BLAST, keeping only clear members of the family, leads to a large number of highly significant hits to a set of known and predicted methyltransferases with a large repertoire of different specifities. This model is restricted to a subfamily found so far only in the Proteobacteria, sharing consistent length, full-length homology, and on average better than 35 % identity. It is reasonable to predict equivalent function within this subfamily. |
| >TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.1e-08 Score=96.07 Aligned_cols=102 Identities=15% Similarity=0.120 Sum_probs=76.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..|+. ..++.+...|+.+..+
T Consensus 121 ~~~~vLDlG~GsG~i~~~la~~~~~~~v~avDis~~al~~A~~n~~~~~~----~~~i~~~~~D~~~~~~---------- 186 (284)
T TIGR03533 121 PVKRILDLCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEINIERHGL----EDRVTLIQSDLFAALP---------- 186 (284)
T ss_pred CCCEEEEEeCchhHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECchhhccC----------
Confidence 3578999999999999999987 46999999999999999999999874 3568888888754311
Q ss_pred cccccccCccchhccCCeeEEEEecc--------------ccCc-----------ccHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADV--------------IYSD-----------DLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDv--------------iY~~-----------~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..+||+|++.-. .|.+ .....+++.+.++|++++ .+++
T Consensus 187 --------------~~~fD~Iv~NPPy~~~~~~~~l~~~~~~ep~~al~gg~dGl~~~~~il~~a~~~L~~gG--~l~~ 249 (284)
T TIGR03533 187 --------------GRKYDLIVSNPPYVDAEDMADLPAEYHHEPELALASGEDGLDLVRRILAEAADHLNENG--VLVV 249 (284)
T ss_pred --------------CCCccEEEECCCCCCccchhhCCHhhhcCHHHHhcCCCcHHHHHHHHHHHHHHhcCCCC--EEEE
Confidence 136999998522 1221 134677888888997764 4444
|
Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors. |
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.5e-08 Score=89.64 Aligned_cols=109 Identities=12% Similarity=0.113 Sum_probs=77.9
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
++..+..++.... ...+|.+|||+|||+|..+..+++.. .+|++.|+++++++.+++|+..++ ..++.+
T Consensus 60 ~~p~~~~~~~~~l---~~~~g~~VLdIG~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g-----~~~v~~ 131 (212)
T PRK13942 60 SAIHMVAIMCELL---DLKEGMKVLEIGTGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLG-----YDNVEV 131 (212)
T ss_pred CcHHHHHHHHHHc---CCCCcCEEEEECCcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcC-----CCCeEE
Confidence 4455555565543 44578999999999999998888773 599999999999999999998876 356777
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
...|-...++ ...+||+|++.-.+. .+...+.+.|++++.
T Consensus 132 ~~gd~~~~~~-----------------------~~~~fD~I~~~~~~~------~~~~~l~~~LkpgG~ 171 (212)
T PRK13942 132 IVGDGTLGYE-----------------------ENAPYDRIYVTAAGP------DIPKPLIEQLKDGGI 171 (212)
T ss_pred EECCcccCCC-----------------------cCCCcCEEEECCCcc------cchHHHHHhhCCCcE
Confidence 7776433211 125799998764432 233456678877653
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=2e-08 Score=89.17 Aligned_cols=100 Identities=11% Similarity=0.103 Sum_probs=75.0
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
...++.+|||+|||+|..++.+|+. +.+|++.|.++.+++.+++|+..|+. ..++.+...|..+..+
T Consensus 37 ~~~~~~~vlDlG~GtG~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~----~~~v~~~~~d~~~~l~------ 106 (198)
T PRK00377 37 RLRKGDMILDIGCGTGSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGV----LNNIVLIKGEAPEILF------ 106 (198)
T ss_pred CCCCcCEEEEeCCcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCC----CCCeEEEEechhhhHh------
Confidence 4567889999999999999998875 36899999999999999999998863 2456666655433210
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
.....||.|+..- .......+++.+.++|++++
T Consensus 107 ----------------~~~~~~D~V~~~~---~~~~~~~~l~~~~~~LkpgG 139 (198)
T PRK00377 107 ----------------TINEKFDRIFIGG---GSEKLKEIISASWEIIKKGG 139 (198)
T ss_pred ----------------hcCCCCCEEEECC---CcccHHHHHHHHHHHcCCCc
Confidence 0124799998732 23456788999999998764
|
|
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.91 E-value=4e-08 Score=88.08 Aligned_cols=113 Identities=16% Similarity=0.207 Sum_probs=79.4
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEe
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDL 180 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~l 180 (330)
++..+..++.... ...++.+|||+|||+|..+..+++.+.+|++.|+++.+++.+++|+..++. .++.+...
T Consensus 62 ~~p~~~~~l~~~l---~~~~~~~VLeiG~GsG~~t~~la~~~~~v~~vd~~~~~~~~a~~~~~~~~~-----~~v~~~~~ 133 (212)
T PRK00312 62 SQPYMVARMTELL---ELKPGDRVLEIGTGSGYQAAVLAHLVRRVFSVERIKTLQWEAKRRLKQLGL-----HNVSVRHG 133 (212)
T ss_pred CcHHHHHHHHHhc---CCCCCCEEEEECCCccHHHHHHHHHhCEEEEEeCCHHHHHHHHHHHHHCCC-----CceEEEEC
Confidence 3344445554442 345678999999999999998888877999999999999999999988752 45777777
Q ss_pred cCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 181 NWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 181 dW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
|..+..+ ...+||+|+..-.+ ..+.+.+.++|++++ .+++.
T Consensus 134 d~~~~~~-----------------------~~~~fD~I~~~~~~------~~~~~~l~~~L~~gG--~lv~~ 174 (212)
T PRK00312 134 DGWKGWP-----------------------AYAPFDRILVTAAA------PEIPRALLEQLKEGG--ILVAP 174 (212)
T ss_pred CcccCCC-----------------------cCCCcCEEEEccCc------hhhhHHHHHhcCCCc--EEEEE
Confidence 6543211 12579999976543 233456778887753 44443
|
|
| >PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.1e-08 Score=91.22 Aligned_cols=106 Identities=9% Similarity=-0.003 Sum_probs=77.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC-CCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW-MNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW-~~~~~~~~~~~~~~ 196 (330)
.+.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++ ..++.+...|+ .....
T Consensus 40 ~~~~VLDiGcGtG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~-----~~~v~~~~~d~~~~l~~--------- 105 (202)
T PRK00121 40 DAPIHLEIGFGKGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEG-----LTNLRLLCGDAVEVLLD--------- 105 (202)
T ss_pred CCCeEEEEccCCCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcC-----CCCEEEEecCHHHHHHH---------
Confidence 5679999999999999988876 4689999999999999999999876 25677877776 32100
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcc--------cHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDD--------LTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--------~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
.-....||+|+..-...+.. ..+.+++.+.++|+++ +.++++.
T Consensus 106 ------------~~~~~~~D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg--G~l~i~~ 156 (202)
T PRK00121 106 ------------MFPDGSLDRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG--GEIHFAT 156 (202)
T ss_pred ------------HcCccccceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC--CEEEEEc
Confidence 00134799998753321111 2578999999999775 5566644
|
|
| >PRK13168 rumA 23S rRNA m(5)U1939 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.7e-08 Score=99.03 Aligned_cols=125 Identities=18% Similarity=0.178 Sum_probs=87.8
Q ss_pred Eeech-HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCee
Q 020158 97 QVWKA-ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSV 175 (330)
Q Consensus 97 ~vW~a-a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v 175 (330)
|+.+. +..|.+.+.... ....+.+|||||||+|..++.+|+.+.+|+++|+++.+++.+++|+..|+. .++
T Consensus 276 q~n~~~~e~l~~~vl~~l---~~~~~~~VLDlgcGtG~~sl~la~~~~~V~gvD~s~~al~~A~~n~~~~~~-----~~v 347 (443)
T PRK13168 276 QVNAQVNQKMVARALEWL---DPQPGDRVLDLFCGLGNFTLPLARQAAEVVGVEGVEAMVERARENARRNGL-----DNV 347 (443)
T ss_pred EcCHHHHHHHHHHHHHHh---cCCCCCEEEEEeccCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC-----Cce
Confidence 44443 355666666553 334678999999999999999999999999999999999999999999873 468
Q ss_pred EEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 176 HVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 176 ~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
.+...|+.+..... ......||+|+. |.=|.. ....++.+.+ ..++.++|++..
T Consensus 348 ~~~~~d~~~~l~~~-------------------~~~~~~fD~Vi~-dPPr~g--~~~~~~~l~~---~~~~~ivyvSCn 401 (443)
T PRK13168 348 TFYHANLEEDFTDQ-------------------PWALGGFDKVLL-DPPRAG--AAEVMQALAK---LGPKRIVYVSCN 401 (443)
T ss_pred EEEEeChHHhhhhh-------------------hhhcCCCCEEEE-CcCCcC--hHHHHHHHHh---cCCCeEEEEEeC
Confidence 88888876532110 001246999875 444432 2344455544 355789999863
|
|
| >PRK11805 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.9e-08 Score=95.56 Aligned_cols=96 Identities=15% Similarity=0.141 Sum_probs=74.0
Q ss_pred CeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 122 IISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
.+|||+|||+|..++.++.. +.+|+++|+++.+++.+++|+..|+. ..++.+...|+.+..+
T Consensus 135 ~~VLDlG~GsG~iai~la~~~p~~~V~avDis~~al~~A~~n~~~~~l----~~~i~~~~~D~~~~l~------------ 198 (307)
T PRK11805 135 TRILDLCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEINIERHGL----EDRVTLIESDLFAALP------------ 198 (307)
T ss_pred CEEEEEechhhHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC----CCcEEEEECchhhhCC------------
Confidence 68999999999999999987 46999999999999999999998874 3568888888754311
Q ss_pred cccccCccchhccCCeeEEEEec--------------cccCc-----------ccHHHHHHHHHHhccCCC
Q 020158 200 ERYSWNSSELKEVQRASVLLAAD--------------VIYSD-----------DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaD--------------viY~~-----------~~~~~l~~tl~~lL~~~~ 245 (330)
..+||+|++.- +.|.+ .....+++.+.++|++++
T Consensus 199 ------------~~~fDlIvsNPPyi~~~~~~~l~~~~~~eP~~AL~gg~dGl~~~~~i~~~a~~~L~pgG 257 (307)
T PRK11805 199 ------------GRRYDLIVSNPPYVDAEDMADLPAEYRHEPELALAAGDDGLDLVRRILAEAPDYLTEDG 257 (307)
T ss_pred ------------CCCccEEEECCCCCCccchhhcCHhhccCccceeeCCCchHHHHHHHHHHHHHhcCCCC
Confidence 13699999852 22222 234678888889997764
|
|
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.8e-08 Score=90.57 Aligned_cols=113 Identities=15% Similarity=0.103 Sum_probs=89.7
Q ss_pred eEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCC
Q 020158 96 LQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQG 173 (330)
Q Consensus 96 ~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~ 173 (330)
.+.|+...+-.- ...+|.+|||+|||||-.++.+++.. .+|++.|+++.||+.+++.+..-+. .
T Consensus 36 ~~~Wr~~~i~~~---------~~~~g~~vLDva~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~-----~ 101 (238)
T COG2226 36 HRLWRRALISLL---------GIKPGDKVLDVACGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGV-----Q 101 (238)
T ss_pred hHHHHHHHHHhh---------CCCCCCEEEEecCCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCc-----c
Confidence 468987655332 12279999999999999999999985 7999999999999999988865331 2
Q ss_pred eeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 174 SVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 174 ~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
.+.+...|-.+.+= ....||+|.++=.+-+....+..++.+.|.|+|++
T Consensus 102 ~i~fv~~dAe~LPf-----------------------~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG 150 (238)
T COG2226 102 NVEFVVGDAENLPF-----------------------PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGG 150 (238)
T ss_pred ceEEEEechhhCCC-----------------------CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCe
Confidence 26666666554310 23589999999999999999999999999999875
|
|
| >TIGR00536 hemK_fam HemK family putative methylases | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.1e-08 Score=91.53 Aligned_cols=100 Identities=17% Similarity=0.245 Sum_probs=75.6
Q ss_pred CeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 122 IISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
.+|||+|||+|..++.++... .+|+++|+++.+++.+++|+..|+. ..++.+...||.+..+
T Consensus 116 ~~vLDlG~GsG~i~l~la~~~~~~~v~avDis~~al~~a~~n~~~~~~----~~~v~~~~~d~~~~~~------------ 179 (284)
T TIGR00536 116 LHILDLGTGSGCIALALAYEFPNAEVIAVDISPDALAVAEENAEKNQL----EHRVEFIQSNLFEPLA------------ 179 (284)
T ss_pred CEEEEEeccHhHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECchhccCc------------
Confidence 689999999999999999874 6999999999999999999998874 2458888888865421
Q ss_pred cccccCccchhccCCeeEEEEec-------------cc-cCc-----------ccHHHHHHHHHHhccCCCCeEEEE
Q 020158 200 ERYSWNSSELKEVQRASVLLAAD-------------VI-YSD-----------DLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaD-------------vi-Y~~-----------~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..+||+|++.- ++ |.+ .....+++...++|+++ +.+++
T Consensus 180 ------------~~~fDlIvsNPPyi~~~~~~~~~~~~~~eP~~AL~gg~dgl~~~~~ii~~a~~~L~~g--G~l~~ 242 (284)
T TIGR00536 180 ------------GQKIDIIVSNPPYIDEEDLADLPNVVRFEPLLALVGGDDGLNILRQIIELAPDYLKPN--GFLVC 242 (284)
T ss_pred ------------CCCccEEEECCCCCCcchhhcCCcccccCcHHHhcCCCcHHHHHHHHHHHHHHhccCC--CEEEE
Confidence 12689988852 21 222 14667888888899775 34444
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain. |
| >PRK05785 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=2e-08 Score=91.26 Aligned_cols=87 Identities=14% Similarity=0.137 Sum_probs=68.5
Q ss_pred CCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 121 GIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
+.+|||||||||..+..+++. +.+|+++|.+++||+.++.+. . ....+..+. +
T Consensus 52 ~~~VLDlGcGtG~~~~~l~~~~~~~v~gvD~S~~Ml~~a~~~~----------~---~~~~d~~~l-p------------ 105 (226)
T PRK05785 52 PKKVLDVAAGKGELSYHFKKVFKYYVVALDYAENMLKMNLVAD----------D---KVVGSFEAL-P------------ 105 (226)
T ss_pred CCeEEEEcCCCCHHHHHHHHhcCCEEEEECCCHHHHHHHHhcc----------c---eEEechhhC-C------------
Confidence 679999999999999999887 689999999999999887531 1 112222221 0
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccC
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPL 243 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~ 243 (330)
. ..++||+|+++.++.+....+.+++.+.+.|++
T Consensus 106 ---------~-~d~sfD~v~~~~~l~~~~d~~~~l~e~~RvLkp 139 (226)
T PRK05785 106 ---------F-RDKSFDVVMSSFALHASDNIEKVIAEFTRVSRK 139 (226)
T ss_pred ---------C-CCCCEEEEEecChhhccCCHHHHHHHHHHHhcC
Confidence 0 135899999999999988999999999999976
|
|
| >PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.1e-08 Score=95.39 Aligned_cols=74 Identities=18% Similarity=0.211 Sum_probs=59.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVR 178 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~ 178 (330)
....|.+.+.... .++.+|||||||+|..++.+++. +.+|+++|+++.+++.+++|+..|+ .++.+.
T Consensus 237 eTE~LVe~aL~~l-----~~~~rVLDLGcGSG~IaiaLA~~~p~a~VtAVDiS~~ALe~AreNa~~~g------~rV~fi 305 (423)
T PRK14966 237 ETEHLVEAVLARL-----PENGRVWDLGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLG------ARVEFA 305 (423)
T ss_pred cHHHHHHHhhhcc-----CCCCEEEEEeChhhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC------CcEEEE
Confidence 3557777776542 24569999999999999998875 5799999999999999999998875 368888
Q ss_pred EecCCCC
Q 020158 179 DLNWMNP 185 (330)
Q Consensus 179 ~ldW~~~ 185 (330)
..||.+.
T Consensus 306 ~gDl~e~ 312 (423)
T PRK14966 306 HGSWFDT 312 (423)
T ss_pred Ecchhcc
Confidence 8888653
|
|
| >TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific | Back alignment and domain information |
|---|
Probab=98.85 E-value=7.4e-08 Score=87.94 Aligned_cols=119 Identities=18% Similarity=0.245 Sum_probs=86.3
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCee
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSV 175 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v 175 (330)
.++.+..+.+.++... .-.+.+|||+|||+|..++.++.. ..+|+++|+++.+++.++.|+..++. .++
T Consensus 69 p~~~~~~l~~~~l~~~----~~~~~~ilDig~G~G~~~~~l~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~~-----~~~ 139 (251)
T TIGR03534 69 PRPDTEELVEAALERL----KKGPLRVLDLGTGSGAIALALAKERPDARVTAVDISPEALAVARKNAARLGL-----DNV 139 (251)
T ss_pred CCCChHHHHHHHHHhc----ccCCCeEEEEeCcHhHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CeE
Confidence 4566677777776653 124569999999999999999987 56999999999999999999998763 467
Q ss_pred EEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--------------------------cc
Q 020158 176 HVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--------------------------DL 229 (330)
Q Consensus 176 ~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--------------------------~~ 229 (330)
.+...|+.+.. ...+||+|++.-..+.. ..
T Consensus 140 ~~~~~d~~~~~------------------------~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 195 (251)
T TIGR03534 140 TFLQSDWFEPL------------------------PGGKFDLIVSNPPYIPEADIHLLDPEVRFHEPRLALFGGEDGLDF 195 (251)
T ss_pred EEEECchhccC------------------------cCCceeEEEECCCCCchhhhhhcChhhhhcCCHHHHcCCCcHHHH
Confidence 88888776531 12479999985433211 11
Q ss_pred HHHHHHHHHHhccCCCCeEEEE
Q 020158 230 TDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 230 ~~~l~~tl~~lL~~~~~~~i~v 251 (330)
...+++.+.++|++++ .+++
T Consensus 196 ~~~~i~~~~~~L~~gG--~~~~ 215 (251)
T TIGR03534 196 YRRIIAQAPRLLKPGG--WLLL 215 (251)
T ss_pred HHHHHHHHHHhcccCC--EEEE
Confidence 2467888888997764 4444
|
Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. |
| >TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific | Back alignment and domain information |
|---|
Probab=98.85 E-value=6e-08 Score=89.51 Aligned_cols=119 Identities=14% Similarity=0.149 Sum_probs=79.8
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVR 178 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~ 178 (330)
.+..|.+.+.... .....+.+|||||||+|..++.+++. +.+|+++|+++.+++.+++|+..|+ +++.
T Consensus 69 ~Te~Lv~~~l~~~--~~~~~~~~vLDlg~GsG~i~l~la~~~~~~~v~~vDis~~al~~A~~N~~~~~--------~~~~ 138 (251)
T TIGR03704 69 RTEFLVDEAAALA--RPRSGTLVVVDLCCGSGAVGAALAAALDGIELHAADIDPAAVRCARRNLADAG--------GTVH 138 (251)
T ss_pred cHHHHHHHHHHhh--cccCCCCEEEEecCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--------CEEE
Confidence 4556666665432 11123458999999999999999876 4699999999999999999998875 2456
Q ss_pred EecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--------------------------ccHHH
Q 020158 179 DLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--------------------------DLTDA 232 (330)
Q Consensus 179 ~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--------------------------~~~~~ 232 (330)
..||.+..+.. ..++||+|++.-..+.. +.+..
T Consensus 139 ~~D~~~~l~~~---------------------~~~~fDlVv~NPPy~~~~~~~~~~~e~~~~ep~~al~gg~dgl~~~~~ 197 (251)
T TIGR03704 139 EGDLYDALPTA---------------------LRGRVDILAANAPYVPTDAIALMPPEARDHEPRVALDGGADGLDVLRR 197 (251)
T ss_pred Eeechhhcchh---------------------cCCCEeEEEECCCCCCchhhhcCCHHHHhCCCHHHhcCCCcHHHHHHH
Confidence 66665431100 12469999876443211 12457
Q ss_pred HHHHHHHhccCCCCeEEEEE
Q 020158 233 LFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 233 l~~tl~~lL~~~~~~~i~va 252 (330)
+++...++|+++ +.+++.
T Consensus 198 i~~~a~~~L~~g--G~l~l~ 215 (251)
T TIGR03704 198 VAAGAPDWLAPG--GHLLVE 215 (251)
T ss_pred HHHHHHHhcCCC--CEEEEE
Confidence 777888899776 345543
|
This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown. |
| >KOG1499 consensus Protein arginine N-methyltransferase PRMT1 and related enzymes [Posttranslational modification, protein turnover, chaperones; Transcription; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.9e-08 Score=95.20 Aligned_cols=102 Identities=17% Similarity=0.275 Sum_probs=81.6
Q ss_pred CCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 116 SSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 116 ~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
...|++|+|||+|||||++|+.+|+.| ++|++.|.+ .+.+.++..+..|+. ...+++....-.+..
T Consensus 56 ~~lf~dK~VlDVGcGtGILS~F~akAGA~~V~aVe~S-~ia~~a~~iv~~N~~----~~ii~vi~gkvEdi~-------- 122 (346)
T KOG1499|consen 56 KHLFKDKTVLDVGCGTGILSMFAAKAGARKVYAVEAS-SIADFARKIVKDNGL----EDVITVIKGKVEDIE-------- 122 (346)
T ss_pred hhhcCCCEEEEcCCCccHHHHHHHHhCcceEEEEech-HHHHHHHHHHHhcCc----cceEEEeecceEEEe--------
Confidence 467999999999999999999999996 589999998 777999999999986 455666655433321
Q ss_pred CCccccccccCccchhccCCeeEEEE---eccccCcccHHHHHHHHHHhccCCC
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLA---ADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIla---aDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
++ .++.|+|+. .-++++...++..+-+=.+.|+++|
T Consensus 123 --------------LP-~eKVDiIvSEWMGy~Ll~EsMldsVl~ARdkwL~~~G 161 (346)
T KOG1499|consen 123 --------------LP-VEKVDIIVSEWMGYFLLYESMLDSVLYARDKWLKEGG 161 (346)
T ss_pred --------------cC-ccceeEEeehhhhHHHHHhhhhhhhhhhhhhccCCCc
Confidence 11 368999995 4566778888888888899998764
|
|
| >TIGR00095 RNA methyltransferase, RsmD family | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.4e-08 Score=85.57 Aligned_cols=113 Identities=14% Similarity=0.159 Sum_probs=80.6
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.+.|++||||+||+|..|+.++.+|+ +|++.|.++.+++.+++|++.|+. ..++.+...|-.+....
T Consensus 47 ~~~g~~vLDLfaGsG~lglea~srga~~v~~vE~~~~a~~~~~~N~~~~~~----~~~~~~~~~D~~~~l~~-------- 114 (189)
T TIGR00095 47 EIQGAHLLDVFAGSGLLGEEALSRGAKVAFLEEDDRKANQTLKENLALLKS----GEQAEVVRNSALRALKF-------- 114 (189)
T ss_pred hcCCCEEEEecCCCcHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhCC----cccEEEEehhHHHHHHH--------
Confidence 46789999999999999999999965 899999999999999999999974 24566666654221000
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHH--hccCCCCeEEEEEeeee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKR--LMPLGSKKVLYLALEKR 256 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~--lL~~~~~~~i~va~~~R 256 (330)
......++.||..|.-|.....+.++..+.. ++ .+++++++-..++
T Consensus 115 ------------~~~~~~~~dvv~~DPPy~~~~~~~~l~~l~~~~~l--~~~~iiv~E~~~~ 162 (189)
T TIGR00095 115 ------------LAKKPTFDNVIYLDPPFFNGALQALLELCENNWIL--EDTVLIVVEEDRE 162 (189)
T ss_pred ------------hhccCCCceEEEECcCCCCCcHHHHHHHHHHCCCC--CCCeEEEEEecCC
Confidence 0011245667778888888777777776655 34 3345665544433
|
This model represents a family of uncharacterized bacterial proteins. Members are present in nearly every complete bacterial genome, always in a single copy. PSI-BLAST analysis shows homology to several families of SAM-dependent methyltransferases, including ribosomal RNA adenine dimethylases. |
| >PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.9e-08 Score=91.18 Aligned_cols=116 Identities=13% Similarity=0.156 Sum_probs=78.5
Q ss_pred echHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 99 WKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 99 W~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
|++.+--.. +..+. ..++|++|||+|||.|..+.-++..| +.|+++|.++.. .++..+...-... ...+..
T Consensus 98 WrSd~KW~r-l~p~l---~~L~gk~VLDIGC~nGY~~frM~~~GA~~ViGiDP~~lf--~~QF~~i~~~lg~--~~~~~~ 169 (315)
T PF08003_consen 98 WRSDWKWDR-LLPHL---PDLKGKRVLDIGCNNGYYSFRMLGRGAKSVIGIDPSPLF--YLQFEAIKHFLGQ--DPPVFE 169 (315)
T ss_pred ccccchHHH-HHhhh---CCcCCCEEEEecCCCcHHHHHHhhcCCCEEEEECCChHH--HHHHHHHHHHhCC--CccEEE
Confidence 666554333 33332 46899999999999999999999986 579999987543 3332222211100 122333
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
..+-..+. ...+.||+|++.-|+||....-..++.++..|++|+.
T Consensus 170 lplgvE~L------------------------p~~~~FDtVF~MGVLYHrr~Pl~~L~~Lk~~L~~gGe 214 (315)
T PF08003_consen 170 LPLGVEDL------------------------PNLGAFDTVFSMGVLYHRRSPLDHLKQLKDSLRPGGE 214 (315)
T ss_pred cCcchhhc------------------------cccCCcCEEEEeeehhccCCHHHHHHHHHHhhCCCCE
Confidence 33332221 1246899999999999999999999999999988753
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification |
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.4e-08 Score=95.11 Aligned_cols=95 Identities=11% Similarity=0.071 Sum_probs=75.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
...+|.+|||+|||+|..++.+|+. +.+|+++|+++++++.+++++. + ..+++...|+.+.
T Consensus 164 ~l~~g~rVLDIGcG~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~--~------l~v~~~~~D~~~l---------- 225 (383)
T PRK11705 164 QLKPGMRVLDIGCGWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCA--G------LPVEIRLQDYRDL---------- 225 (383)
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--c------CeEEEEECchhhc----------
Confidence 3457889999999999999988875 7899999999999999998873 1 2355555554331
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~ 245 (330)
.++||+|++..++++. ...+.+++.+.++|++++
T Consensus 226 ----------------~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG 261 (383)
T PRK11705 226 ----------------NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDG 261 (383)
T ss_pred ----------------CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCc
Confidence 2479999999998875 356789999999998864
|
|
| >PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.3e-08 Score=95.47 Aligned_cols=109 Identities=14% Similarity=0.022 Sum_probs=75.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+|++|||||||||..++.++..+ .+|+++|.++.+++.+++|+.+|+.. ..++++...|..+....
T Consensus 219 ~~g~rVLDlfsgtG~~~l~aa~~ga~~V~~VD~s~~al~~a~~N~~~Ngl~---~~~v~~i~~D~~~~l~~--------- 286 (396)
T PRK15128 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLD---LSKAEFVRDDVFKLLRT--------- 286 (396)
T ss_pred cCCCeEEEeccCCCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CCcEEEEEccHHHHHHH---------
Confidence 468999999999999999877665 49999999999999999999999842 13677777775442100
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc---------cHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD---------LTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~---------~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
......+||+|++.-..|... .+..++....++|+++ +.++.
T Consensus 287 ----------~~~~~~~fDlVilDPP~f~~~k~~l~~~~~~y~~l~~~a~~lLk~g--G~lv~ 337 (396)
T PRK15128 287 ----------YRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNPG--GILLT 337 (396)
T ss_pred ----------HHhcCCCCCEEEECCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCC--eEEEE
Confidence 001134799999554433322 2445555667888765 44444
|
|
| >PRK04266 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.6e-07 Score=83.98 Aligned_cols=128 Identities=16% Similarity=0.205 Sum_probs=79.8
Q ss_pred CcCeEeech------HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHH
Q 020158 93 SVGLQVWKA------ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 93 ~~G~~vW~a------a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
..++++|.. +.+|+.+ +.. ...+|.+|||+|||+|..++.++... .+|++.|.++.|++.+.+++..
T Consensus 44 ~~~~~~~~~~r~~~~~~ll~~~--~~l---~i~~g~~VlD~G~G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~ 118 (226)
T PRK04266 44 GVEYREWNPRRSKLAAAILKGL--KNF---PIKKGSKVLYLGAASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEE 118 (226)
T ss_pred CcEEEEECCCccchHHHHHhhH--hhC---CCCCCCEEEEEccCCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhh
Confidence 345666654 4444444 111 34578899999999999999999873 5899999999999988887754
Q ss_pred ccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 165 NSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 165 N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
. .++.+...|-..+... ......||+|+. |.- ++.....+++.+.++|++|
T Consensus 119 ~-------~nv~~i~~D~~~~~~~--------------------~~l~~~~D~i~~-d~~-~p~~~~~~L~~~~r~LKpG 169 (226)
T PRK04266 119 R-------KNIIPILADARKPERY--------------------AHVVEKVDVIYQ-DVA-QPNQAEIAIDNAEFFLKDG 169 (226)
T ss_pred c-------CCcEEEECCCCCcchh--------------------hhccccCCEEEE-CCC-ChhHHHHHHHHHHHhcCCC
Confidence 2 3345444443221000 001245899883 221 1223345688999999886
Q ss_pred CCeEEEEEeeee
Q 020158 245 SKKVLYLALEKR 256 (330)
Q Consensus 245 ~~~~i~va~~~R 256 (330)
+. ++++.+.|
T Consensus 170 G~--lvI~v~~~ 179 (226)
T PRK04266 170 GY--LLLAIKAR 179 (226)
T ss_pred cE--EEEEEecc
Confidence 44 44433433
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.3e-08 Score=83.14 Aligned_cols=97 Identities=19% Similarity=0.203 Sum_probs=72.0
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCH-HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGL-AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL-~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
.+++||..+. ...++++|||+|||+|. ++..+++.|..|+++|+++..++.++.+. +.+..-|+
T Consensus 3 ~i~~~l~~~~---~~~~~~kileIG~GfG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~------------~~~v~dDl 67 (134)
T PRK04148 3 TIAEFIAENY---EKGKNKKIVELGIGFYFKVAKKLKESGFDVIVIDINEKAVEKAKKLG------------LNAFVDDL 67 (134)
T ss_pred HHHHHHHHhc---ccccCCEEEEEEecCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhC------------CeEEECcC
Confidence 4788887764 33567899999999996 99999999999999999999888776542 46677777
Q ss_pred CCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccC
Q 020158 183 MNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPL 243 (330)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~ 243 (330)
.++ .+.+-=++|+||.......+..-+.++.+.
T Consensus 68 f~p----------------------------~~~~y~~a~liysirpp~el~~~~~~la~~ 100 (134)
T PRK04148 68 FNP----------------------------NLEIYKNAKLIYSIRPPRDLQPFILELAKK 100 (134)
T ss_pred CCC----------------------------CHHHHhcCCEEEEeCCCHHHHHHHHHHHHH
Confidence 765 234444566677766666666666666654
|
|
| >PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=6e-08 Score=101.72 Aligned_cols=107 Identities=20% Similarity=0.157 Sum_probs=79.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+|++|||||||||..|+.+|+.|+ +|+++|+++.+++.+++|+..|+.. ..++++...|..+...
T Consensus 537 ~~g~rVLDlf~gtG~~sl~aa~~Ga~~V~~vD~s~~al~~a~~N~~~ng~~---~~~v~~i~~D~~~~l~---------- 603 (702)
T PRK11783 537 AKGKDFLNLFAYTGTASVHAALGGAKSTTTVDMSNTYLEWAERNFALNGLS---GRQHRLIQADCLAWLK---------- 603 (702)
T ss_pred cCCCeEEEcCCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCC---ccceEEEEccHHHHHH----------
Confidence 4689999999999999999999864 7999999999999999999999852 1467777777543210
Q ss_pred cccccccCccchhccCCeeEEEEecccc-----------CcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIY-----------SDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY-----------~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
....+||+|++.---+ ....+..++..+.++|+++ ++++++
T Consensus 604 ------------~~~~~fDlIilDPP~f~~~~~~~~~~~~~~~y~~l~~~a~~lL~~g--G~l~~~ 655 (702)
T PRK11783 604 ------------EAREQFDLIFIDPPTFSNSKRMEDSFDVQRDHVALIKDAKRLLRPG--GTLYFS 655 (702)
T ss_pred ------------HcCCCcCEEEECCCCCCCCCccchhhhHHHHHHHHHHHHHHHcCCC--CEEEEE
Confidence 0124799999743322 1234567888888899775 455554
|
|
| >PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.6e-07 Score=87.21 Aligned_cols=78 Identities=18% Similarity=0.270 Sum_probs=60.7
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
+.+..|.+++.... ...++.+|||+|||+|..++.++... .+|+++|+++.+++.++.|+..+. ..++.+
T Consensus 91 ~~te~l~~~~~~~~---~~~~~~~vLDiG~GsG~~~~~la~~~~~~~v~~iDis~~~l~~a~~n~~~~~-----~~~i~~ 162 (275)
T PRK09328 91 PETEELVEWALEAL---LLKEPLRVLDLGTGSGAIALALAKERPDAEVTAVDISPEALAVARRNAKHGL-----GARVEF 162 (275)
T ss_pred CCcHHHHHHHHHhc---cccCCCEEEEEcCcHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhCC-----CCcEEE
Confidence 34556777766432 33467899999999999999999874 799999999999999999998222 357888
Q ss_pred EEecCCCC
Q 020158 178 RDLNWMNP 185 (330)
Q Consensus 178 ~~ldW~~~ 185 (330)
...||...
T Consensus 163 ~~~d~~~~ 170 (275)
T PRK09328 163 LQGDWFEP 170 (275)
T ss_pred EEccccCc
Confidence 88887553
|
|
| >TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.3e-07 Score=82.77 Aligned_cols=97 Identities=18% Similarity=0.114 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++.+|||+|||+|..+..+++.. .+++++|+++.+++.++.|.. . ..++.+...|..+...
T Consensus 38 ~~~~~vldiG~G~G~~~~~~~~~~~~~~~~~~iD~~~~~~~~~~~~~~--~-----~~~i~~~~~d~~~~~~-------- 102 (223)
T TIGR01934 38 FKGQKVLDVACGTGDLAIELAKSAPDRGKVTGVDFSSEMLEVAKKKSE--L-----PLNIEFIQADAEALPF-------- 102 (223)
T ss_pred CCCCeEEEeCCCCChhHHHHHHhcCCCceEEEEECCHHHHHHHHHHhc--c-----CCCceEEecchhcCCC--------
Confidence 378899999999999998888774 389999999999999998875 1 2456666666544210
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
..++||+|+++.++.+......+++.+.++|++++
T Consensus 103 ---------------~~~~~D~i~~~~~~~~~~~~~~~l~~~~~~L~~gG 137 (223)
T TIGR01934 103 ---------------EDNSFDAVTIAFGLRNVTDIQKALREMYRVLKPGG 137 (223)
T ss_pred ---------------CCCcEEEEEEeeeeCCcccHHHHHHHHHHHcCCCc
Confidence 12479999999999888889999999999998764
|
Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases. |
| >TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.4e-07 Score=89.39 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=78.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
-++.+|||+|||+|..++.+++. ..++++.|. +.+++.+++|+...+. ..++++...|..+..
T Consensus 148 ~~~~~vlDiG~G~G~~~~~~~~~~p~~~~~~~D~-~~~~~~a~~~~~~~gl----~~rv~~~~~d~~~~~---------- 212 (306)
T TIGR02716 148 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV----ADRMRGIAVDIYKES---------- 212 (306)
T ss_pred CCCCEEEEeCCchhHHHHHHHHHCCCCEEEEEec-HHHHHHHHHHHHhCCc----cceEEEEecCccCCC----------
Confidence 45689999999999999999987 368999998 6999999999988764 467888888865421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~ 246 (330)
...+|+|+.+-++|+. +....+++.+.+.|++|+.
T Consensus 213 ---------------~~~~D~v~~~~~lh~~~~~~~~~il~~~~~~L~pgG~ 249 (306)
T TIGR02716 213 ---------------YPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGR 249 (306)
T ss_pred ---------------CCCCCEEEeEhhhhcCChHHHHHHHHHHHHhcCCCCE
Confidence 1246999999999864 3446799999999988643
|
Members of this protein family are the S-adenosylmethionine-depenedent C-20 methyltransferase BchU, part of the pathway of bacteriochlorophyll c production in photosynthetic green sulfur bacteria. The position modified by this enzyme represents the difference between bacteriochlorophylls c and d; strains lacking this protein can only produced bacteriochlorophyll d. |
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.7e-07 Score=82.94 Aligned_cols=96 Identities=10% Similarity=0.086 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||+|||+|..++.+++. +.+|+++|.++++++.+++|+..++. .++++...|..+..+.
T Consensus 39 ~~~~~VLDiG~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~-----~~v~~~~~d~~~~~~~-------- 105 (196)
T PRK07402 39 EPDSVLWDIGAGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGV-----KNVEVIEGSAPECLAQ-------- 105 (196)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-----CCeEEEECchHHHHhh--------
Confidence 46789999999999999988876 47999999999999999999998763 4566666554321000
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
....+|.|+. + .....+.+++.+.++|++++
T Consensus 106 --------------~~~~~d~v~~-~---~~~~~~~~l~~~~~~LkpgG 136 (196)
T PRK07402 106 --------------LAPAPDRVCI-E---GGRPIKEILQAVWQYLKPGG 136 (196)
T ss_pred --------------CCCCCCEEEE-E---CCcCHHHHHHHHHHhcCCCe
Confidence 0123455433 1 12356788999999998764
|
|
| >PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.75 E-value=9.9e-08 Score=90.89 Aligned_cols=105 Identities=10% Similarity=0.065 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||||||+|..++.+|..+.+|++.|+++.+++.+++|+..|+. .++++...|..+...
T Consensus 172 ~~~~~VLDl~cG~G~~sl~la~~~~~V~gvD~s~~av~~A~~n~~~~~l-----~~v~~~~~D~~~~~~----------- 235 (315)
T PRK03522 172 LPPRSMWDLFCGVGGFGLHCATPGMQLTGIEISAEAIACAKQSAAELGL-----TNVQFQALDSTQFAT----------- 235 (315)
T ss_pred cCCCEEEEccCCCCHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHcCC-----CceEEEEcCHHHHHH-----------
Confidence 4578999999999999999999999999999999999999999999873 467777766543210
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
.....||+|+..-. + ......+++.|.. .+++.++|++...
T Consensus 236 -----------~~~~~~D~Vv~dPP-r-~G~~~~~~~~l~~---~~~~~ivyvsc~p 276 (315)
T PRK03522 236 -----------AQGEVPDLVLVNPP-R-RGIGKELCDYLSQ---MAPRFILYSSCNA 276 (315)
T ss_pred -----------hcCCCCeEEEECCC-C-CCccHHHHHHHHH---cCCCeEEEEECCc
Confidence 01236899886533 2 2344455555444 3456788887643
|
|
| >KOG2497 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.1e-09 Score=99.04 Aligned_cols=170 Identities=24% Similarity=0.205 Sum_probs=108.3
Q ss_pred cccccCCCCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHH
Q 020158 85 HNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 85 ~~~~t~~~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
|........+|+.+|++++.|++++.++ +..+.+++|.++|||+++..+.+++....|...|-...+.-++..|...
T Consensus 58 ~~~~~~~~~tg~~~w~~al~L~~~l~~~---~d~~~~~~v~~l~~gi~~~~~~~a~~~~~v~~~~~~~~~~~~l~~~~~~ 134 (262)
T KOG2497|consen 58 HSLRFLLARTGLSVWESALSLEADLRDK---PDLSSELTVEELGCDIALKHVLAARVPDCVVTLDSLRCAGLLLEEIILL 134 (262)
T ss_pred hHHHHHHHHhccccchHHHHHHHHHhhC---cccccccchHhhccCHHHHHHHHHhcccceecCCccCcHHHHHHHHHhc
Confidence 3434566789999999999999999988 3558899999999999999988887765555555444555455555444
Q ss_pred ccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 165 NSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 165 N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
|..... ...-+.-.++|...... .|. ....+|+|++|||+|+ ..+.+++.++..+|..+
T Consensus 135 ~~~~~~-~~~~~~~~~~~~~~~~~--------------~~~-----~~~~~dll~~AdV~yd-~~~~~~~~~~~~lL~~~ 193 (262)
T KOG2497|consen 135 SRDLSL-EVRDSAPELNQAFLESK--------------PET-----SQEFTDLLGGADVIYD-TELRHLLETLMTLLLRW 193 (262)
T ss_pred cccccc-cccccchhHHHHHHhcC--------------ccc-----ccchhhheeccCeeeh-hhhhHHHHHHHHHHHhc
Confidence 432211 22233333444332111 011 1124999999999999 99999999999988654
Q ss_pred CCe----EEEEEeeeeCcccccchhhhccccchhhhhh
Q 020158 245 SKK----VLYLALEKRYNFSLNDLDVVANGYSHFRSYI 278 (330)
Q Consensus 245 ~~~----~i~va~~~R~~f~~~~~d~v~~~y~~f~~~l 278 (330)
.+. ......+.+..|+..+.......|.-|+..-
T Consensus 194 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~n 231 (262)
T KOG2497|consen 194 RGTGLLTLLTIALESIVVFTSVDTKSLLSVYENFRLNN 231 (262)
T ss_pred cccchhhhhhhcccceEEEeehhhhhhhhhhhhhhhhc
Confidence 322 1223344444555555555555565555543
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.8e-07 Score=84.25 Aligned_cols=127 Identities=11% Similarity=0.125 Sum_probs=83.2
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHc-cC------CCCCCC
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLN-SG------VFSHQG 173 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N-~~------~~~~~~ 173 (330)
..-.|.+|+... ..-++.+||++|||.|--++.+|.+|.+|+++|+++.+++.+....... .. ......
T Consensus 19 p~~~l~~~~~~l----~~~~~~rvLd~GCG~G~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (213)
T TIGR03840 19 VNPLLVKHWPAL----GLPAGARVFVPLCGKSLDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAG 94 (213)
T ss_pred CCHHHHHHHHhh----CCCCCCeEEEeCCCchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecC
Confidence 355677776442 1125679999999999999999999999999999999998753311110 00 000023
Q ss_pred eeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC--cccHHHHHHHHHHhccCCCCeEEEE
Q 020158 174 SVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS--DDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 174 ~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
++++...|..+.... ....||.|+..-++.+ ++.....++.+.++|++++ ..+++
T Consensus 95 ~v~~~~~D~~~~~~~----------------------~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG-~~ll~ 151 (213)
T TIGR03840 95 NIEIFCGDFFALTAA----------------------DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGA-RQLLI 151 (213)
T ss_pred ceEEEEccCCCCCcc----------------------cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCC-eEEEE
Confidence 566666666553210 1246899987766543 4455678999999998864 34555
Q ss_pred Eee
Q 020158 252 ALE 254 (330)
Q Consensus 252 a~~ 254 (330)
++.
T Consensus 152 ~~~ 154 (213)
T TIGR03840 152 TLD 154 (213)
T ss_pred EEE
Confidence 543
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PRK06202 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=8e-08 Score=87.30 Aligned_cols=93 Identities=19% Similarity=0.094 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh----C--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV----A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSL 192 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~----~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~ 192 (330)
.++.+|||||||+|..+..++.. | .+|+++|++++|++.++.+...++ +.+...+-....
T Consensus 59 ~~~~~iLDlGcG~G~~~~~L~~~~~~~g~~~~v~gvD~s~~~l~~a~~~~~~~~--------~~~~~~~~~~l~------ 124 (232)
T PRK06202 59 DRPLTLLDIGCGGGDLAIDLARWARRDGLRLEVTAIDPDPRAVAFARANPRRPG--------VTFRQAVSDELV------ 124 (232)
T ss_pred CCCcEEEEeccCCCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHhccccCC--------CeEEEEeccccc------
Confidence 35679999999999988888753 2 489999999999999988764332 222222211110
Q ss_pred CCCCccccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhcc
Q 020158 193 GNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMP 242 (330)
Q Consensus 193 ~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~ 242 (330)
. ..++||+|+++.++++-.. ...+++.+.++++
T Consensus 125 ----------------~-~~~~fD~V~~~~~lhh~~d~~~~~~l~~~~r~~~ 159 (232)
T PRK06202 125 ----------------A-EGERFDVVTSNHFLHHLDDAEVVRLLADSAALAR 159 (232)
T ss_pred ----------------c-cCCCccEEEECCeeecCChHHHHHHHHHHHHhcC
Confidence 0 1257999999999988654 3467777777774
|
|
| >cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy) | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.4e-07 Score=72.12 Aligned_cols=101 Identities=21% Similarity=0.188 Sum_probs=78.3
Q ss_pred eEEEEcCccCHHHHHHHH-hCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccc
Q 020158 123 ISLELGAGTGLAGILLSR-VAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQER 201 (330)
Q Consensus 123 ~VLELG~GtGL~gl~lA~-~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~ 201 (330)
+|+|+|||+|..+..++. ...+++++|.++.++..++++...+. ..++.+...++.+...
T Consensus 1 ~ildig~G~G~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------------- 61 (107)
T cd02440 1 RVLDLGCGTGALALALASGPGARVTGVDISPVALELARKAAAALL-----ADNVEVLKGDAEELPP-------------- 61 (107)
T ss_pred CeEEEcCCccHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHhccc-----ccceEEEEcChhhhcc--------------
Confidence 589999999999988887 46899999999999998886544443 3567777777665421
Q ss_pred cccCccchhccCCeeEEEEeccccC-cccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 202 YSWNSSELKEVQRASVLLAADVIYS-DDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 202 ~~w~~~~~~~~~~~DlIlaaDviY~-~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
....++|+|++..+++. ......+++.+.++++++ +.+++.
T Consensus 62 --------~~~~~~d~i~~~~~~~~~~~~~~~~l~~~~~~l~~~--g~~~~~ 103 (107)
T cd02440 62 --------EADESFDVIISDPPLHHLVEDLARFLEEARRLLKPG--GVLVLT 103 (107)
T ss_pred --------ccCCceEEEEEccceeehhhHHHHHHHHHHHHcCCC--CEEEEE
Confidence 02357999999999998 889999999999999765 445443
|
There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.). |
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.73 E-value=6.4e-07 Score=81.01 Aligned_cols=116 Identities=11% Similarity=0.150 Sum_probs=78.3
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCC----------CC
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVF----------SH 171 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~----------~~ 171 (330)
.-.|.+|+... ...++.+||++|||.|--++.+|.+|.+|++.|+++.+++.+.. .|+... ..
T Consensus 23 ~~~L~~~~~~~----~~~~~~rvL~~gCG~G~da~~LA~~G~~V~avD~s~~Ai~~~~~---~~~l~~~~~~~~~~~~~~ 95 (218)
T PRK13255 23 NPLLQKYWPAL----ALPAGSRVLVPLCGKSLDMLWLAEQGHEVLGVELSELAVEQFFA---ENGLTPQTRQSGEFEHYQ 95 (218)
T ss_pred CHHHHHHHHhh----CCCCCCeEEEeCCCChHhHHHHHhCCCeEEEEccCHHHHHHHHH---HcCCCccccccccccccc
Confidence 44566666432 12356799999999999999999999999999999999987642 221110 00
Q ss_pred CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC--cccHHHHHHHHHHhccCCCC
Q 020158 172 QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS--DDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 172 ~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL~~~~~ 246 (330)
..++++...|..+..+ .....||+|+..-++.. ++.-...++.|.++|++++.
T Consensus 96 ~~~v~~~~~D~~~l~~----------------------~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~ 150 (218)
T PRK13255 96 AGEITIYCGDFFALTA----------------------ADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCR 150 (218)
T ss_pred cCceEEEECcccCCCc----------------------ccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCe
Confidence 2345555555444311 01247899997776543 44667889999999988753
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.4e-07 Score=88.50 Aligned_cols=104 Identities=15% Similarity=0.151 Sum_probs=80.5
Q ss_pred CCCeEEEEcCc-cCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 120 NGIISLELGAG-TGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 120 ~g~~VLELG~G-tGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.+++|+|+||| .|+.++.+++. +.++++.|.++++++.+++++...... ..++++...|..+..+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL---~~rV~F~~~Da~~~~~-------- 191 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDL---SKRMFFHTADVMDVTE-------- 191 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCc---cCCcEEEECchhhccc--------
Confidence 77999999999 55888887754 468999999999999999999653221 4678998888765311
Q ss_pred CccccccccCccchhccCCeeEEEEeccccC-cccHHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYS-DDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~-~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
...+||+|+++=++|. ......+++.+.+.|++| +++++
T Consensus 192 ---------------~l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPG--G~Lvl 231 (296)
T PLN03075 192 ---------------SLKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPG--ALLML 231 (296)
T ss_pred ---------------ccCCcCEEEEecccccccccHHHHHHHHHHhcCCC--cEEEE
Confidence 1357999999955565 489999999999999875 45555
|
|
| >PLN02336 phosphoethanolamine N-methyltransferase | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.7e-07 Score=90.25 Aligned_cols=99 Identities=18% Similarity=0.191 Sum_probs=74.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
..+++|||||||+|..+..+++.+.+|++.|+++.+++.++. .+.. ..++.+...|......+.
T Consensus 36 ~~~~~vLDlGcG~G~~~~~la~~~~~v~giD~s~~~l~~a~~---~~~~----~~~i~~~~~d~~~~~~~~--------- 99 (475)
T PLN02336 36 YEGKSVLELGAGIGRFTGELAKKAGQVIALDFIESVIKKNES---INGH----YKNVKFMCADVTSPDLNI--------- 99 (475)
T ss_pred cCCCEEEEeCCCcCHHHHHHHhhCCEEEEEeCCHHHHHHHHH---Hhcc----CCceEEEEecccccccCC---------
Confidence 457799999999999999999998999999999999875433 3322 246777777764321100
Q ss_pred ccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGS 245 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~ 245 (330)
...+||+|++..++++-.. ...+++.+.++|++++
T Consensus 100 ------------~~~~fD~I~~~~~l~~l~~~~~~~~l~~~~r~Lk~gG 136 (475)
T PLN02336 100 ------------SDGSVDLIFSNWLLMYLSDKEVENLAERMVKWLKVGG 136 (475)
T ss_pred ------------CCCCEEEEehhhhHHhCCHHHHHHHHHHHHHhcCCCe
Confidence 1257999999999987544 6789999999998763
|
|
| >TIGR01177 conserved hypothetical protein TIGR01177 | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.8e-07 Score=88.25 Aligned_cols=114 Identities=13% Similarity=0.024 Sum_probs=81.6
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
.||..+.... ..-+|.+|||+|||||...+.++..+.+|+++|+++.|+..++.|+..++. .++.+...|..
T Consensus 169 ~la~~~~~l~---~~~~g~~vLDp~cGtG~~lieaa~~~~~v~g~Di~~~~~~~a~~nl~~~g~-----~~i~~~~~D~~ 240 (329)
T TIGR01177 169 KLARAMVNLA---RVTEGDRVLDPFCGTGGFLIEAGLMGAKVIGCDIDWKMVAGARINLEHYGI-----EDFFVKRGDAT 240 (329)
T ss_pred HHHHHHHHHh---CCCCcCEEEECCCCCCHHHHHHHHhCCeEEEEcCCHHHHHHHHHHHHHhCC-----CCCeEEecchh
Confidence 4555555432 334678999999999999999888899999999999999999999988764 23556555544
Q ss_pred CCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC----------cccHHHHHHHHHHhccCCCCeEE
Q 020158 184 NPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS----------DDLTDALFHTLKRLMPLGSKKVL 249 (330)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~----------~~~~~~l~~tl~~lL~~~~~~~i 249 (330)
+... ....||+|++.-. |. ......+++.+.+.|++++..++
T Consensus 241 ~l~~-----------------------~~~~~D~Iv~dPP-yg~~~~~~~~~~~~l~~~~l~~~~r~Lk~gG~lv~ 292 (329)
T TIGR01177 241 KLPL-----------------------SSESVDAIATDPP-YGRSTTAAGDGLESLYERSLEEFHEVLKSEGWIVY 292 (329)
T ss_pred cCCc-----------------------ccCCCCEEEECCC-CcCcccccCCchHHHHHHHHHHHHHHccCCcEEEE
Confidence 3210 1247999987422 21 13467899999999987754333
|
This family is found exclusively in the Archaea. |
| >smart00138 MeTrc Methyltransferase, chemotaxis proteins | Back alignment and domain information |
|---|
Probab=98.67 E-value=1e-07 Score=88.56 Aligned_cols=108 Identities=16% Similarity=0.213 Sum_probs=72.7
Q ss_pred CCCeEEEEcCccCH----HHHHHHHh-------CCeEEEEeCchHHHHHHHHHHHH----ccCC----------------
Q 020158 120 NGIISLELGAGTGL----AGILLSRV-------AWTVFLTDHGNYILDNCAKNVQL----NSGV---------------- 168 (330)
Q Consensus 120 ~g~~VLELG~GtGL----~gl~lA~~-------~~~V~~TD~~~~~L~~~~~Nv~~----N~~~---------------- 168 (330)
++.+|+++|||||- +++.++.. ..+|++||+++.||+.+++++-. ....
T Consensus 99 ~~~ri~d~GCgtGee~YslA~~l~e~~~~~~~~~~~I~g~Dis~~~L~~Ar~~~y~~~~~~~~~~~~~~~yf~~~~~~~~ 178 (264)
T smart00138 99 RRVRIWSAGCSTGEEPYSLAMLLAETLPKAREPDVKILATDIDLKALEKARAGIYPERELEDLPKALLARYFSRVEDKYR 178 (264)
T ss_pred CCEEEEeccccCChHHHHHHHHHHHHhhhcCCCCeEEEEEECCHHHHHHHHcCCCCHHHHhcCCHHHHhhhEEeCCCeEE
Confidence 45799999999995 45555543 25899999999999999876411 1100
Q ss_pred CC--CCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCC
Q 020158 169 FS--HQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLG 244 (330)
Q Consensus 169 ~~--~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~ 244 (330)
+. -...+.+...|-.+... ..++||+|+|..|+.+.. ....+++.+.+.|++|
T Consensus 179 v~~~ir~~V~F~~~dl~~~~~-----------------------~~~~fD~I~crnvl~yf~~~~~~~~l~~l~~~L~pG 235 (264)
T smart00138 179 VKPELKERVRFAKHNLLAESP-----------------------PLGDFDLIFCRNVLIYFDEPTQRKLLNRFAEALKPG 235 (264)
T ss_pred EChHHhCcCEEeeccCCCCCC-----------------------ccCCCCEEEechhHHhCCHHHHHHHHHHHHHHhCCC
Confidence 00 01245555555544311 135899999999987653 5568999999999775
Q ss_pred CCeEEEEE
Q 020158 245 SKKVLYLA 252 (330)
Q Consensus 245 ~~~~i~va 252 (330)
+.+++.
T Consensus 236 --G~L~lg 241 (264)
T smart00138 236 --GYLFLG 241 (264)
T ss_pred --eEEEEE
Confidence 556664
|
Methylates methyl-accepting chemotaxis proteins to form gamma-glutamyl methyl ester residues. |
| >TIGR02085 meth_trns_rumB 23S rRNA (uracil-5-)-methyltransferase RumB | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.2e-07 Score=90.62 Aligned_cols=104 Identities=12% Similarity=0.075 Sum_probs=77.8
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
..+.+|||||||+|..|+.+|..+.+|++.|+++.+++.+++|++.|+. .++.+...|..+...
T Consensus 232 ~~~~~vLDL~cG~G~~~l~la~~~~~v~~vE~~~~av~~a~~N~~~~~~-----~~~~~~~~d~~~~~~----------- 295 (374)
T TIGR02085 232 IPVTQMWDLFCGVGGFGLHCAGPDTQLTGIEIESEAIACAQQSAQMLGL-----DNLSFAALDSAKFAT----------- 295 (374)
T ss_pred cCCCEEEEccCCccHHHHHHhhcCCeEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEECCHHHHHH-----------
Confidence 4568999999999999999998899999999999999999999999973 467777776543210
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
....+||+|+.. .=| ......+++.|..+ .++.++|++..
T Consensus 296 -----------~~~~~~D~vi~D-PPr-~G~~~~~l~~l~~~---~p~~ivyvsc~ 335 (374)
T TIGR02085 296 -----------AQMSAPELVLVN-PPR-RGIGKELCDYLSQM---APKFILYSSCN 335 (374)
T ss_pred -----------hcCCCCCEEEEC-CCC-CCCcHHHHHHHHhc---CCCeEEEEEeC
Confidence 011358987764 335 35566666666543 45689999763
|
This family consists of RNA methyltransferases designated RumB, formerly YbjF. Members act on 23S rRNA U747 and the equivalent position in other proteobacterial species. This family is homologous to the other 23S rRNA methyltransferase RumA and to the tRNA methyltransferase TrmA. |
| >TIGR00091 tRNA (guanine-N(7)-)-methyltransferase | Back alignment and domain information |
|---|
Probab=98.67 E-value=2e-07 Score=82.61 Aligned_cols=108 Identities=12% Similarity=0.057 Sum_probs=77.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
...+|||||||+|..++.+|+. ..+|+++|+++.+++.+++|+..++. .++.+...|..+..+.
T Consensus 16 ~~~~ilDiGcG~G~~~~~la~~~p~~~v~gvD~~~~~l~~a~~~~~~~~l-----~ni~~i~~d~~~~~~~--------- 81 (194)
T TIGR00091 16 KAPLHLEIGCGKGRFLIDMAKQNPDKNFLGIEIHTPIVLAANNKANKLGL-----KNLHVLCGDANELLDK--------- 81 (194)
T ss_pred CCceEEEeCCCccHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHhCC-----CCEEEEccCHHHHHHh---------
Confidence 4568999999999999999987 46899999999999999999987763 5788877776542110
Q ss_pred cccccccCccchhccCCeeEEEEe--ccccCcc------cHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 198 SQERYSWNSSELKEVQRASVLLAA--DVIYSDD------LTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaa--DviY~~~------~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
......+|.|+.. |.-+... ..+.+++.+.++|+++ +.++++..
T Consensus 82 -----------~~~~~~~d~v~~~~pdpw~k~~h~~~r~~~~~~l~~~~r~Lkpg--G~l~~~td 133 (194)
T TIGR00091 82 -----------FFPDGSLSKVFLNFPDPWPKKRHNKRRITQPHFLKEYANVLKKG--GVIHFKTD 133 (194)
T ss_pred -----------hCCCCceeEEEEECCCcCCCCCccccccCCHHHHHHHHHHhCCC--CEEEEEeC
Confidence 0012368888865 2222111 1267999999999876 45666543
|
In E. coli, this protein flanks the DNA repair protein MutY, also called micA. |
| >TIGR00478 tly hemolysin TlyA family protein | Back alignment and domain information |
|---|
Probab=98.67 E-value=8.2e-08 Score=87.25 Aligned_cols=115 Identities=16% Similarity=0.152 Sum_probs=77.2
Q ss_pred EeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHH-HHHHHHHccCCCCCCCe
Q 020158 97 QVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDN-CAKNVQLNSGVFSHQGS 174 (330)
Q Consensus 97 ~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~-~~~Nv~~N~~~~~~~~~ 174 (330)
.+++++.-|...+... ...++|++|||+|||||..+..+++.| .+|++.|+++.++.. ++.|...-. ...
T Consensus 55 ~vsr~~~kL~~~l~~~---~~~~~~~~vlDiG~gtG~~t~~l~~~ga~~v~avD~~~~~l~~~l~~~~~v~~-----~~~ 126 (228)
T TIGR00478 55 FVSRGGEKLKEALEEF---NIDVKNKIVLDVGSSTGGFTDCALQKGAKEVYGVDVGYNQLAEKLRQDERVKV-----LER 126 (228)
T ss_pred hhhhhHHHHHHHHHhc---CCCCCCCEEEEcccCCCHHHHHHHHcCCCEEEEEeCCHHHHHHHHhcCCCeeE-----eec
Confidence 6789999999988765 245799999999999999999999995 689999999876654 443322100 011
Q ss_pred eEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 175 VHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 175 v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..++.++|.+.++ +...+|++++|-.. .+..+..+|++ +..++++
T Consensus 127 ~ni~~~~~~~~~~-----------------------d~~~~DvsfiS~~~--------~l~~i~~~l~~-~~~~~L~ 171 (228)
T TIGR00478 127 TNIRYVTPADIFP-----------------------DFATFDVSFISLIS--------ILPELDLLLNP-NDLTLLF 171 (228)
T ss_pred CCcccCCHhHcCC-----------------------CceeeeEEEeehHh--------HHHHHHHHhCc-CeEEEEc
Confidence 2333555655421 12367777766433 46777888876 4444444
|
Hemolysins are exotoxins that attack blood cell membranes and cause cell rupture, often by forming a pore in the membrane. At least two members of this protein family have been characterized indirectly as pore-forming hemolysins, one from the spirochete Serpula (Treponema) hyodysenteriae and one from Mycobacterium tuberculosis. However, homology domains in this protein suggest methyltransferase activity (pfam01728) and RNA-binding activity (pfam01479). |
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.3e-07 Score=93.90 Aligned_cols=61 Identities=23% Similarity=0.255 Sum_probs=51.7
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
++.+|||+|||+|..++.++.. +.+|+++|+++.+++.++.|+..|+. ..++.+...||.+
T Consensus 138 ~~~~VLDlG~GsG~iai~la~~~p~~~v~avDis~~al~~A~~N~~~~~l----~~~v~~~~~D~~~ 200 (506)
T PRK01544 138 KFLNILELGTGSGCIAISLLCELPNANVIATDISLDAIEVAKSNAIKYEV----TDRIQIIHSNWFE 200 (506)
T ss_pred CCCEEEEccCchhHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC----ccceeeeecchhh
Confidence 3568999999999999988875 57999999999999999999998864 3567888877754
|
|
| >PRK06922 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.2e-07 Score=95.04 Aligned_cols=102 Identities=14% Similarity=0.198 Sum_probs=73.4
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
...+.+|||+|||+|..+..++.. +.+|+++|+++.|++.++.+...++ .++.+...|-.+... .
T Consensus 416 ~~~g~rVLDIGCGTG~ls~~LA~~~P~~kVtGIDIS~~MLe~Ararl~~~g------~~ie~I~gDa~dLp~-~------ 482 (677)
T PRK06922 416 YIKGDTIVDVGAGGGVMLDMIEEETEDKRIYGIDISENVIDTLKKKKQNEG------RSWNVIKGDAINLSS-S------ 482 (677)
T ss_pred hcCCCEEEEeCCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhcC------CCeEEEEcchHhCcc-c------
Confidence 356889999999999988888765 5799999999999999998876543 234444444332100 0
Q ss_pred CccccccccCccchhccCCeeEEEEeccccC-------------cccHHHHHHHHHHhccCCCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYS-------------DDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~-------------~~~~~~l~~tl~~lL~~~~~ 246 (330)
+ ..++||+|+++-++++ ......+++.+.+.|++||.
T Consensus 483 -------------f-edeSFDvVVsn~vLH~L~syIp~~g~~f~~edl~kiLreI~RVLKPGGr 532 (677)
T PRK06922 483 -------------F-EKESVDTIVYSSILHELFSYIEYEGKKFNHEVIKKGLQSAYEVLKPGGR 532 (677)
T ss_pred -------------c-CCCCEEEEEEchHHHhhhhhcccccccccHHHHHHHHHHHHHHcCCCcE
Confidence 0 1357999998876642 24567889999999987643
|
|
| >PHA03411 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.1e-07 Score=85.19 Aligned_cols=100 Identities=9% Similarity=-0.018 Sum_probs=70.1
Q ss_pred CCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
+.+|||+|||+|..++.++.. +.+|+++|+++.+++.+++|. .++.+...|..+..
T Consensus 65 ~grVLDLGcGsGilsl~la~r~~~~~V~gVDisp~al~~Ar~n~----------~~v~~v~~D~~e~~------------ 122 (279)
T PHA03411 65 TGKVLDLCAGIGRLSFCMLHRCKPEKIVCVELNPEFARIGKRLL----------PEAEWITSDVFEFE------------ 122 (279)
T ss_pred CCeEEEcCCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----------cCCEEEECchhhhc------------
Confidence 468999999999999988776 479999999999999998874 12344444432210
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcc---------c-----------HHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDD---------L-----------TDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~---------~-----------~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
...+||+||+...++... . +..+++....+|.+++ .+++++.-+
T Consensus 123 ------------~~~kFDlIIsNPPF~~l~~~d~~~~~~~~GG~~g~~~l~~~~~l~~v~~~L~p~G--~~~~~yss~ 186 (279)
T PHA03411 123 ------------SNEKFDVVISNPPFGKINTTDTKDVFEYTGGEFEFKVMTLGQKFADVGYFIVPTG--SAGFAYSGR 186 (279)
T ss_pred ------------ccCCCcEEEEcCCccccCchhhhhhhhhccCccccccccHHHHHhhhHheecCCc--eEEEEEecc
Confidence 124799999988887621 1 3667777788887765 444444443
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=6.2e-07 Score=85.59 Aligned_cols=95 Identities=22% Similarity=0.187 Sum_probs=67.8
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
..++.+|||+|||+|..++.+|+.. ..|++.|.++++++.+++|+..++. .++.+...|..+..+
T Consensus 78 i~~g~~VLDIG~GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~-----~nV~~i~gD~~~~~~------- 145 (322)
T PRK13943 78 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGI-----ENVIFVCGDGYYGVP------- 145 (322)
T ss_pred CCCCCEEEEEeCCccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEeCChhhccc-------
Confidence 4467899999999999999998863 3699999999999999999988763 456666655433211
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
....||+|+.+-.+ +.+...+.+.|++++.
T Consensus 146 ----------------~~~~fD~Ii~~~g~------~~ip~~~~~~LkpgG~ 175 (322)
T PRK13943 146 ----------------EFAPYDVIFVTVGV------DEVPETWFTQLKEGGR 175 (322)
T ss_pred ----------------ccCCccEEEECCch------HHhHHHHHHhcCCCCE
Confidence 12469999976322 2233445667876643
|
|
| >smart00650 rADc Ribosomal RNA adenine dimethylases | Back alignment and domain information |
|---|
Probab=98.63 E-value=6e-07 Score=77.63 Aligned_cols=61 Identities=16% Similarity=0.048 Sum_probs=50.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
...+.+|||+|||+|..+..++..+.+|++.|+++.+++.+++|+.. ..++++...|..+.
T Consensus 11 ~~~~~~vLEiG~G~G~lt~~l~~~~~~v~~vE~~~~~~~~~~~~~~~-------~~~v~ii~~D~~~~ 71 (169)
T smart00650 11 LRPGDTVLEIGPGKGALTEELLERAARVTAIEIDPRLAPRLREKFAA-------ADNLTVIHGDALKF 71 (169)
T ss_pred CCCcCEEEEECCCccHHHHHHHhcCCeEEEEECCHHHHHHHHHHhcc-------CCCEEEEECchhcC
Confidence 34667999999999999999998888999999999999999999853 24677777776553
|
|
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.2e-07 Score=83.83 Aligned_cols=105 Identities=11% Similarity=0.117 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++++|||+|||+|..++.+|+. +.+|+++|+++++++.+++|++.++. ..++++...|..+..+..
T Consensus 67 ~~~~~vLEiGt~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl----~~~i~~~~gda~~~L~~l------ 136 (234)
T PLN02781 67 MNAKNTLEIGVFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGV----DHKINFIQSDALSALDQL------ 136 (234)
T ss_pred hCCCEEEEecCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEccHHHHHHHH------
Confidence 56789999999999988888765 36999999999999999999999875 357888877765431100
Q ss_pred CccccccccCccchh--ccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELK--EVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~--~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
.. ..++||+|+. |. +...+..++..+.+++++| +++++
T Consensus 137 -------------~~~~~~~~fD~Vfi-Da--~k~~y~~~~~~~~~ll~~G--G~ii~ 176 (234)
T PLN02781 137 -------------LNNDPKPEFDFAFV-DA--DKPNYVHFHEQLLKLVKVG--GIIAF 176 (234)
T ss_pred -------------HhCCCCCCCCEEEE-CC--CHHHHHHHHHHHHHhcCCC--eEEEE
Confidence 00 1257999875 22 1345567788888899775 45544
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.62 E-value=9.8e-07 Score=78.59 Aligned_cols=116 Identities=16% Similarity=0.235 Sum_probs=82.0
Q ss_pred echHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEE
Q 020158 99 WKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVR 178 (330)
Q Consensus 99 W~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~ 178 (330)
|-++..+...|.+.. ..-+|.+|||+|||+|..+-++|+.+.+|+..+..+.+.+.+++|++..+ ..++.++
T Consensus 54 tis~P~~vA~m~~~L---~~~~g~~VLEIGtGsGY~aAvla~l~~~V~siEr~~~L~~~A~~~L~~lg-----~~nV~v~ 125 (209)
T COG2518 54 TISAPHMVARMLQLL---ELKPGDRVLEIGTGSGYQAAVLARLVGRVVSIERIEELAEQARRNLETLG-----YENVTVR 125 (209)
T ss_pred eecCcHHHHHHHHHh---CCCCCCeEEEECCCchHHHHHHHHHhCeEEEEEEcHHHHHHHHHHHHHcC-----CCceEEE
Confidence 334444444444432 55678999999999999999999998899999999999999999999887 3568888
Q ss_pred EecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 179 DLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 179 ~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..|=...++ ...+||.|+..-.. +... +.+..-|++++.-++-+
T Consensus 126 ~gDG~~G~~-----------------------~~aPyD~I~Vtaaa--~~vP----~~Ll~QL~~gGrlv~Pv 169 (209)
T COG2518 126 HGDGSKGWP-----------------------EEAPYDRIIVTAAA--PEVP----EALLDQLKPGGRLVIPV 169 (209)
T ss_pred ECCcccCCC-----------------------CCCCcCEEEEeecc--CCCC----HHHHHhcccCCEEEEEE
Confidence 887555433 23689998865333 2233 34445666665444434
|
|
| >TIGR00479 rumA 23S rRNA (uracil-5-)-methyltransferase RumA | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.8e-07 Score=92.76 Aligned_cols=106 Identities=15% Similarity=0.131 Sum_probs=76.8
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
-.+.+|||||||+|..++.+|+.+.+|++.|+++.+++.+++|+..|+. .++++...|+.+..+..
T Consensus 291 ~~~~~vLDl~cG~G~~sl~la~~~~~V~~vE~~~~av~~a~~n~~~~~~-----~nv~~~~~d~~~~l~~~--------- 356 (431)
T TIGR00479 291 QGEELVVDAYCGVGTFTLPLAKQAKSVVGIEVVPESVEKAQQNAELNGI-----ANVEFLAGTLETVLPKQ--------- 356 (431)
T ss_pred CCCCEEEEcCCCcCHHHHHHHHhCCEEEEEEcCHHHHHHHHHHHHHhCC-----CceEEEeCCHHHHHHHH---------
Confidence 3457999999999999999999989999999999999999999999973 57888877765421100
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
......||+|+.. .=+ ......+++.+.+ + +++.++|++.
T Consensus 357 ----------~~~~~~~D~vi~d-PPr-~G~~~~~l~~l~~-l--~~~~ivyvsc 396 (431)
T TIGR00479 357 ----------PWAGQIPDVLLLD-PPR-KGCAAEVLRTIIE-L--KPERIVYVSC 396 (431)
T ss_pred ----------HhcCCCCCEEEEC-cCC-CCCCHHHHHHHHh-c--CCCEEEEEcC
Confidence 0012468998853 223 2345666666665 3 3457888865
|
This protein family was first proposed to be RNA methyltransferases by homology to the TrmA family. The member from E. coli has now been shown to act as the 23S RNA methyltransferase for the conserved U1939. The gene is now designated rumA and was previously designated ygcA. |
| >PTZ00146 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=5.1e-06 Score=77.90 Aligned_cols=132 Identities=14% Similarity=0.134 Sum_probs=81.5
Q ss_pred cCeEeech--HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCC
Q 020158 94 VGLQVWKA--ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGV 168 (330)
Q Consensus 94 ~G~~vW~a--a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~ 168 (330)
+-+++|+- |.+-|..+ .-...-...++.+|||||||+|..+..+|... .+|++.|+++.+++.+...+..
T Consensus 105 ~eyR~w~p~rSKlaa~i~-~g~~~l~IkpG~~VLDLGaG~G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~---- 179 (293)
T PTZ00146 105 IEYRVWNPFRSKLAAAII-GGVANIPIKPGSKVLYLGAASGTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKK---- 179 (293)
T ss_pred ceeeeeCCcccHHHHHHH-CCcceeccCCCCEEEEeCCcCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh----
Confidence 34899986 33433333 22211134578899999999999999999873 5899999998877555443322
Q ss_pred CCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeE
Q 020158 169 FSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKV 248 (330)
Q Consensus 169 ~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~ 248 (330)
..++.....|...+.. + ......+|+|++.- ..++....++..+.++|++++ .
T Consensus 180 ---r~NI~~I~~Da~~p~~--------------y------~~~~~~vDvV~~Dv--a~pdq~~il~~na~r~LKpGG--~ 232 (293)
T PTZ00146 180 ---RPNIVPIIEDARYPQK--------------Y------RMLVPMVDVIFADV--AQPDQARIVALNAQYFLKNGG--H 232 (293)
T ss_pred ---cCCCEEEECCccChhh--------------h------hcccCCCCEEEEeC--CCcchHHHHHHHHHHhccCCC--E
Confidence 1334444444332100 0 00124699997654 346666677888999998764 4
Q ss_pred EEEEeeeeC
Q 020158 249 LYLALEKRY 257 (330)
Q Consensus 249 i~va~~~R~ 257 (330)
++++.+.+.
T Consensus 233 ~vI~ika~~ 241 (293)
T PTZ00146 233 FIISIKANC 241 (293)
T ss_pred EEEEEeccc
Confidence 555555554
|
|
| >PLN02672 methionine S-methyltransferase | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.9e-07 Score=98.40 Aligned_cols=84 Identities=17% Similarity=0.091 Sum_probs=63.9
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCC--------
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVF-------- 169 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~-------- 169 (330)
+-+..|++.+.... ...+++++|||||||+|.+++.+++.. .+|+++|+++++++.+++|+..|...-
T Consensus 100 peTE~lve~L~~~~--~~~~~~~~VLDlG~GSG~Iai~La~~~~~~~v~avDis~~Al~~A~~Na~~n~l~~~~~~~~~~ 177 (1082)
T PLN02672 100 DWSFTFYEGLNRHP--DSIFRDKTVAELGCGNGWISIAIAEKWLPSKVYGLDINPRAVKVAWINLYLNALDDDGLPVYDG 177 (1082)
T ss_pred hhHHHHHHHHHhcc--cccCCCCEEEEEecchHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCccccccccccc
Confidence 34566777753321 234678899999999999999999873 699999999999999999999985310
Q ss_pred ---CCCCeeEEEEecCCCC
Q 020158 170 ---SHQGSVHVRDLNWMNP 185 (330)
Q Consensus 170 ---~~~~~v~v~~ldW~~~ 185 (330)
....++.+...||.+.
T Consensus 178 ~~~~l~~rV~f~~sDl~~~ 196 (1082)
T PLN02672 178 EGKTLLDRVEFYESDLLGY 196 (1082)
T ss_pred ccccccccEEEEECchhhh
Confidence 0024688888888764
|
|
| >TIGR02143 trmA_only tRNA (uracil-5-)-methyltransferase | Back alignment and domain information |
|---|
Probab=98.57 E-value=6.4e-07 Score=86.70 Aligned_cols=114 Identities=13% Similarity=0.140 Sum_probs=75.1
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcccc
Q 020158 121 GIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQE 200 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~ 200 (330)
+.+|||||||+|..|+.+|+.+.+|++.|.++.+++.+++|+..|+. .++.+...|..+..+.. ..
T Consensus 198 ~~~vlDl~~G~G~~sl~la~~~~~v~~vE~~~~av~~a~~n~~~~~~-----~~v~~~~~d~~~~~~~~---------~~ 263 (353)
T TIGR02143 198 KGDLLELYCGNGNFSLALAQNFRRVLATEIAKPSVNAAQYNIAANNI-----DNVQIIRMSAEEFTQAM---------NG 263 (353)
T ss_pred CCcEEEEeccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEEcCHHHHHHHH---------hh
Confidence 34799999999999999999888999999999999999999999973 46777777765421100 00
Q ss_pred ccccCc-cchh-ccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 201 RYSWNS-SELK-EVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 201 ~~~w~~-~~~~-~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
...|.. .... ....||+|+.--. .....+.+++.|.+ ++.++|++...
T Consensus 264 ~~~~~~~~~~~~~~~~~d~v~lDPP--R~G~~~~~l~~l~~-----~~~ivYvsC~p 313 (353)
T TIGR02143 264 VREFRRLKGIDLKSYNCSTIFVDPP--RAGLDPDTCKLVQA-----YERILYISCNP 313 (353)
T ss_pred ccccccccccccccCCCCEEEECCC--CCCCcHHHHHHHHc-----CCcEEEEEcCH
Confidence 000000 0000 0113788776333 34556666666544 36799998644
|
This family consists exclusively of proteins believed to act as tRNA (uracil-5-)-methyltransferase. All members of far are proteobacterial. The seed alignment was taken directly from pfam05958 in Pfam 12.0, but higher cutoffs are used to select only functionally equivalent proteins. Homologous proteins excluded by the higher cutoff scores of this model include other uracil methyltransferases, such as RumA, active on rRNA. |
| >KOG3010 consensus Methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.56 E-value=9.8e-08 Score=85.99 Aligned_cols=105 Identities=13% Similarity=0.128 Sum_probs=72.1
Q ss_pred CeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccc
Q 020158 122 IISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQER 201 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~ 201 (330)
+.++|+|||+|.+++.+|.+=.+|++||.++.||+.+++--..+-.. .... ..++ ....
T Consensus 35 ~~a~DvG~G~Gqa~~~iae~~k~VIatD~s~~mL~~a~k~~~~~y~~----t~~~-----ms~~------------~~v~ 93 (261)
T KOG3010|consen 35 RLAWDVGTGNGQAARGIAEHYKEVIATDVSEAMLKVAKKHPPVTYCH----TPST-----MSSD------------EMVD 93 (261)
T ss_pred ceEEEeccCCCcchHHHHHhhhhheeecCCHHHHHHhhcCCCccccc----CCcc-----cccc------------cccc
Confidence 47999999999999999999899999999999999776432111100 0000 0000 0000
Q ss_pred cccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 202 YSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 202 ~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
+ +...++.|+|+|+.++++.+ .+.|.+.+.++|++.++.+++-.+.
T Consensus 94 L------~g~e~SVDlI~~Aqa~HWFd-le~fy~~~~rvLRk~Gg~iavW~Y~ 139 (261)
T KOG3010|consen 94 L------LGGEESVDLITAAQAVHWFD-LERFYKEAYRVLRKDGGLIAVWNYN 139 (261)
T ss_pred c------cCCCcceeeehhhhhHHhhc-hHHHHHHHHHHcCCCCCEEEEEEcc
Confidence 0 11236899999999999876 4788999999999876665555554
|
|
| >PRK11727 23S rRNA mA1618 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.8e-07 Score=86.87 Aligned_cols=87 Identities=14% Similarity=0.175 Sum_probs=61.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHc-cCCCCCCCeeEEEEe-cCCCCCCCCccCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLN-SGVFSHQGSVHVRDL-NWMNPWPPIFSLGNS 195 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N-~~~~~~~~~v~v~~l-dW~~~~~~~~~~~~~ 195 (330)
++.+|||||||+|.+...++.. +.++++||+++.+++.++.|++.| +. ..++.++.- +-.+....
T Consensus 114 ~~~~vLDIGtGag~I~~lLa~~~~~~~~~atDId~~Al~~A~~Nv~~Np~l----~~~I~~~~~~~~~~i~~~------- 182 (321)
T PRK11727 114 ANVRVLDIGVGANCIYPLIGVHEYGWRFVGSDIDPQALASAQAIISANPGL----NGAIRLRLQKDSKAIFKG------- 182 (321)
T ss_pred CCceEEEecCCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhccCC----cCcEEEEEccchhhhhhc-------
Confidence 4679999999999776666554 679999999999999999999999 54 356666431 11110000
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCccc
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDL 229 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~ 229 (330)
-....+.||+|+|.--+|....
T Consensus 183 ------------i~~~~~~fDlivcNPPf~~s~~ 204 (321)
T PRK11727 183 ------------IIHKNERFDATLCNPPFHASAA 204 (321)
T ss_pred ------------ccccCCceEEEEeCCCCcCcch
Confidence 0012358999999999887543
|
|
| >PRK05031 tRNA (uracil-5-)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.53 E-value=9.6e-07 Score=85.77 Aligned_cols=131 Identities=15% Similarity=0.141 Sum_probs=83.2
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
+..|.+++.... . ..+.+||||+||+|..|+.+|+.+.+|+++|.++.+++.+++|+..|+. .++.+...|
T Consensus 192 ~e~l~~~v~~~~---~-~~~~~vLDl~~G~G~~sl~la~~~~~v~~vE~~~~ai~~a~~N~~~~~~-----~~v~~~~~d 262 (362)
T PRK05031 192 NEKMLEWALDAT---K-GSKGDLLELYCGNGNFTLALARNFRRVLATEISKPSVAAAQYNIAANGI-----DNVQIIRMS 262 (362)
T ss_pred HHHHHHHHHHHh---h-cCCCeEEEEeccccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHHhCC-----CcEEEEECC
Confidence 445666665542 1 1235799999999999999999888999999999999999999999973 467777777
Q ss_pred CCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 182 WMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 182 W~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
..+..+..... .......+. +. ...+||+|+. |.=| ....+.+++.|.+ ++.++|++...
T Consensus 263 ~~~~l~~~~~~----~~~~~~~~~--~~-~~~~~D~v~l-DPPR-~G~~~~~l~~l~~-----~~~ivyvSC~p 322 (362)
T PRK05031 263 AEEFTQAMNGV----REFNRLKGI--DL-KSYNFSTIFV-DPPR-AGLDDETLKLVQA-----YERILYISCNP 322 (362)
T ss_pred HHHHHHHHhhc----ccccccccc--cc-cCCCCCEEEE-CCCC-CCCcHHHHHHHHc-----cCCEEEEEeCH
Confidence 64421100000 000000000 00 0125898887 4435 4566666666654 35789998644
|
|
| >PRK14904 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.4e-06 Score=86.98 Aligned_cols=78 Identities=13% Similarity=0.082 Sum_probs=60.2
Q ss_pred eEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCC
Q 020158 96 LQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQ 172 (330)
Q Consensus 96 ~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~ 172 (330)
..+++.+-.++..++. ...|.+|||+|||+|..++.++.. +.+|++.|.++.+++.+++|+..++.
T Consensus 232 ~~vqd~~s~l~~~~l~------~~~g~~VLDlgaG~G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~----- 300 (445)
T PRK14904 232 VSVQNPTQALACLLLN------PQPGSTVLDLCAAPGGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGI----- 300 (445)
T ss_pred EEEeCHHHHHHHHhcC------CCCCCEEEEECCCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCC-----
Confidence 4688765555555432 356789999999999988888765 36899999999999999999998763
Q ss_pred CeeEEEEecCCC
Q 020158 173 GSVHVRDLNWMN 184 (330)
Q Consensus 173 ~~v~v~~ldW~~ 184 (330)
.++.+...|...
T Consensus 301 ~~v~~~~~Da~~ 312 (445)
T PRK14904 301 TIIETIEGDARS 312 (445)
T ss_pred CeEEEEeCcccc
Confidence 457777766544
|
|
| >TIGR02081 metW methionine biosynthesis protein MetW | Back alignment and domain information |
|---|
Probab=98.50 E-value=7.1e-07 Score=78.90 Aligned_cols=89 Identities=13% Similarity=0.137 Sum_probs=63.6
Q ss_pred CCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 120 NGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.+.+|||+|||+|..+..++.. +.+++++|+++++++.++.+ .+.+...|..+..+..
T Consensus 13 ~~~~iLDiGcG~G~~~~~l~~~~~~~~~giD~s~~~i~~a~~~------------~~~~~~~d~~~~l~~~--------- 71 (194)
T TIGR02081 13 PGSRVLDLGCGDGELLALLRDEKQVRGYGIEIDQDGVLACVAR------------GVNVIQGDLDEGLEAF--------- 71 (194)
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCcEEEEeCCHHHHHHHHHc------------CCeEEEEEhhhccccc---------
Confidence 5679999999999988888755 56889999999988876531 1234444433211000
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhc
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLM 241 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL 241 (330)
...+||+|+++.++++......+++.+.+.+
T Consensus 72 ------------~~~sfD~Vi~~~~l~~~~d~~~~l~e~~r~~ 102 (194)
T TIGR02081 72 ------------PDKSFDYVILSQTLQATRNPEEILDEMLRVG 102 (194)
T ss_pred ------------CCCCcCEEEEhhHhHcCcCHHHHHHHHHHhC
Confidence 1257999999999998888888877777665
|
This protein is found alongside MetX, of the enzyme that acylates homoserine as a first step toward methionine biosynthesis, in many species. It appears to act in methionine biosynthesis but is not fully characterized. |
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.4e-06 Score=73.71 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=77.5
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
..-+|.+++|+|||||-+++-+|.. ..+|++.|.++++++.+++|++..+ ..++.+.+.+--+.
T Consensus 31 ~~~~g~~l~DIGaGtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg-----~~n~~vv~g~Ap~~--------- 96 (187)
T COG2242 31 RPRPGDRLWDIGAGTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFG-----VDNLEVVEGDAPEA--------- 96 (187)
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhC-----CCcEEEEeccchHh---------
Confidence 4457889999999999999999965 4799999999999999999999988 37788887763332
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
+.....+|.|+-.-- ...+.+++++...|++++.
T Consensus 97 --------------L~~~~~~daiFIGGg----~~i~~ile~~~~~l~~ggr 130 (187)
T COG2242 97 --------------LPDLPSPDAIFIGGG----GNIEEILEAAWERLKPGGR 130 (187)
T ss_pred --------------hcCCCCCCEEEECCC----CCHHHHHHHHHHHcCcCCe
Confidence 112236888875543 5788999999999988754
|
|
| >KOG2904 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=8.7e-07 Score=81.27 Aligned_cols=84 Identities=20% Similarity=0.141 Sum_probs=63.4
Q ss_pred cCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCC
Q 020158 94 VGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSH 171 (330)
Q Consensus 94 ~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~ 171 (330)
+-..-|+... +.+++.....+...+++..+||+|||+|..|+.++.. -.+|+++|.++.++.++.+|++.+..
T Consensus 123 VlIPRpETEE-~V~~Vid~~~~~~~~~~~~ildlgtGSGaIslsll~~L~~~~v~AiD~S~~Ai~La~eN~qr~~l---- 197 (328)
T KOG2904|consen 123 VLIPRPETEE-WVEAVIDALNNSEHSKHTHILDLGTGSGAISLSLLHGLPQCTVTAIDVSKAAIKLAKENAQRLKL---- 197 (328)
T ss_pred eeecCccHHH-HHHHHHHHHhhhhhcccceEEEecCCccHHHHHHHhcCCCceEEEEeccHHHHHHHHHHHHHHhh----
Confidence 3344565544 4455554433345677889999999999999988875 36899999999999999999999986
Q ss_pred CCeeEEEEecC
Q 020158 172 QGSVHVRDLNW 182 (330)
Q Consensus 172 ~~~v~v~~ldW 182 (330)
.+.+.+..++.
T Consensus 198 ~g~i~v~~~~m 208 (328)
T KOG2904|consen 198 SGRIEVIHNIM 208 (328)
T ss_pred cCceEEEeccc
Confidence 57888885543
|
|
| >PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.7e-07 Score=79.00 Aligned_cols=88 Identities=15% Similarity=0.160 Sum_probs=64.7
Q ss_pred CCCeEEEEcCccCH-HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 120 NGIISLELGAGTGL-AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 120 ~g~~VLELG~GtGL-~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.|.+|||||||.|- ........+.+.++.|++++.+..|.+ ..+.|.+.|..+..+.-
T Consensus 13 pgsrVLDLGCGdG~LL~~L~~~k~v~g~GvEid~~~v~~cv~------------rGv~Viq~Dld~gL~~f--------- 71 (193)
T PF07021_consen 13 PGSRVLDLGCGDGELLAYLKDEKQVDGYGVEIDPDNVAACVA------------RGVSVIQGDLDEGLADF--------- 71 (193)
T ss_pred CCCEEEecCCCchHHHHHHHHhcCCeEEEEecCHHHHHHHHH------------cCCCEEECCHHHhHhhC---------
Confidence 56899999999994 444444457899999999876655542 34567888877753211
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHh
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRL 240 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~l 240 (330)
..++||+||.++++-....++.+++.+.+.
T Consensus 72 ------------~d~sFD~VIlsqtLQ~~~~P~~vL~EmlRV 101 (193)
T PF07021_consen 72 ------------PDQSFDYVILSQTLQAVRRPDEVLEEMLRV 101 (193)
T ss_pred ------------CCCCccEEehHhHHHhHhHHHHHHHHHHHh
Confidence 346899999999999888888887766555
|
Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells []. |
| >KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.1e-06 Score=72.02 Aligned_cols=67 Identities=22% Similarity=0.287 Sum_probs=50.9
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccC
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSG 167 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~ 167 (330)
.+++|.+-|......-.....+-+||||||+|.++-.+++. ....++||+||.+++...+.+..|+.
T Consensus 24 DTFlLlDaLekd~~eL~~~~~~i~lEIG~GSGvvstfL~~~i~~~~~~latDiNp~A~~~Tl~TA~~n~~ 93 (209)
T KOG3191|consen 24 DTFLLLDALEKDAAELKGHNPEICLEIGCGSGVVSTFLASVIGPQALYLATDINPEALEATLETARCNRV 93 (209)
T ss_pred hhhHHHHHHHHHHHHHhhcCceeEEEecCCcchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhcCC
Confidence 45677776665431001112567999999999999988887 36799999999999999999999974
|
|
| >PRK14902 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.8e-06 Score=83.76 Aligned_cols=61 Identities=15% Similarity=0.055 Sum_probs=51.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
.+|.+|||+|||+|..++.++.. ..+|++.|+++.+++.+++|+..++. .++.+...|+.+
T Consensus 249 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~-----~~v~~~~~D~~~ 312 (444)
T PRK14902 249 KGGDTVLDACAAPGGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGL-----TNIETKALDARK 312 (444)
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CeEEEEeCCccc
Confidence 45789999999999999988876 36899999999999999999998873 457887777655
|
|
| >PRK10901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.8e-06 Score=84.33 Aligned_cols=59 Identities=20% Similarity=0.027 Sum_probs=49.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
.+|.+|||+|||+|..++.++..+ .+|++.|.++.+++.+++|+..++. .+.+...|..
T Consensus 243 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~------~~~~~~~D~~ 303 (427)
T PRK10901 243 QNGERVLDACAAPGGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGL------KATVIVGDAR 303 (427)
T ss_pred CCCCEEEEeCCCCChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCC------CeEEEEcCcc
Confidence 468899999999999999988874 5999999999999999999998763 2455555543
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=7.9e-07 Score=82.59 Aligned_cols=102 Identities=11% Similarity=0.156 Sum_probs=73.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
++++|||||||+|..+..+++. +.+|++.|+++++++.+++++..+.. ..++++...|..+...
T Consensus 66 ~~~~vL~IG~G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~----~~rv~v~~~Da~~~l~---------- 131 (262)
T PRK04457 66 RPQHILQIGLGGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPEN----GERFEVIEADGAEYIA---------- 131 (262)
T ss_pred CCCEEEEECCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCC----CCceEEEECCHHHHHH----------
Confidence 4679999999999999888776 46899999999999999999866532 3567777666433210
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc------cHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD------LTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~------~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
....+||+|+. |. |+.. .+..+++.+.++|+++ +++++
T Consensus 132 ------------~~~~~yD~I~~-D~-~~~~~~~~~l~t~efl~~~~~~L~pg--Gvlvi 175 (262)
T PRK04457 132 ------------VHRHSTDVILV-DG-FDGEGIIDALCTQPFFDDCRNALSSD--GIFVV 175 (262)
T ss_pred ------------hCCCCCCEEEE-eC-CCCCCCccccCcHHHHHHHHHhcCCC--cEEEE
Confidence 01247999986 43 3322 3479999999999875 44444
|
|
| >KOG4300 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.2e-06 Score=77.35 Aligned_cols=96 Identities=17% Similarity=0.138 Sum_probs=72.2
Q ss_pred eEEEEcCccCHHHHHHH-HhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE-EEEecCCCCCCCCccCCCCCcccc
Q 020158 123 ISLELGAGTGLAGILLS-RVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH-VRDLNWMNPWPPIFSLGNSSASQE 200 (330)
Q Consensus 123 ~VLELG~GtGL~gl~lA-~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~-v~~ldW~~~~~~~~~~~~~~~~~~ 200 (330)
.|||+|||||--=-..- ..+.+|++.|-++.|-+.+.+.+..|.. .++. +...+ ++..++.
T Consensus 79 ~vLEvgcGtG~Nfkfy~~~p~~svt~lDpn~~mee~~~ks~~E~k~-----~~~~~fvva~-ge~l~~l----------- 141 (252)
T KOG4300|consen 79 DVLEVGCGTGANFKFYPWKPINSVTCLDPNEKMEEIADKSAAEKKP-----LQVERFVVAD-GENLPQL----------- 141 (252)
T ss_pred ceEEecccCCCCcccccCCCCceEEEeCCcHHHHHHHHHHHhhccC-----cceEEEEeec-hhcCccc-----------
Confidence 57999999994332222 2267999999999999999999999863 4444 33332 2222211
Q ss_pred ccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 201 RYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 201 ~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
..+++|+|+++=|+-+.......++.+.++|+|++
T Consensus 142 ----------~d~s~DtVV~TlvLCSve~~~k~L~e~~rlLRpgG 176 (252)
T KOG4300|consen 142 ----------ADGSYDTVVCTLVLCSVEDPVKQLNEVRRLLRPGG 176 (252)
T ss_pred ----------ccCCeeeEEEEEEEeccCCHHHHHHHHHHhcCCCc
Confidence 34689999999999999999999999999998863
|
|
| >PHA03412 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.6e-06 Score=78.82 Aligned_cols=91 Identities=7% Similarity=0.005 Sum_probs=65.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHh-----CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV-----AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~-----~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
.+.+|||+|||+|.+++.+++. ..+|++.|+++.+++.+++|+. .+.+...|.....
T Consensus 49 ~~grVLDlG~GSG~Lalala~~~~~~~~~~V~aVEID~~Al~~Ar~n~~----------~~~~~~~D~~~~~-------- 110 (241)
T PHA03412 49 TSGSVVDLCAGIGGLSFAMVHMMMYAKPREIVCVELNHTYYKLGKRIVP----------EATWINADALTTE-------- 110 (241)
T ss_pred CCCEEEEccChHHHHHHHHHHhcccCCCcEEEEEECCHHHHHHHHhhcc----------CCEEEEcchhccc--------
Confidence 4679999999999999998874 3589999999999999998852 2334444433210
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCc------------ccHHHHHHHHHHhccCC
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSD------------DLTDALFHTLKRLMPLG 244 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~------------~~~~~l~~tl~~lL~~~ 244 (330)
...+||+||++-..+.. ..+..|++...+|+++|
T Consensus 111 ----------------~~~~FDlIIsNPPY~~~~~~d~~ar~~g~~~~~~li~~A~~Ll~~G 156 (241)
T PHA03412 111 ----------------FDTLFDMAISNPPFGKIKTSDFKGKYTGAEFEYKVIERASQIARQG 156 (241)
T ss_pred ----------------ccCCccEEEECCCCCCccccccCCcccccHHHHHHHHHHHHHcCCC
Confidence 12479999998777632 23566777777877554
|
|
| >TIGR03438 probable methyltransferase | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.4e-06 Score=80.95 Aligned_cols=113 Identities=18% Similarity=0.154 Sum_probs=72.7
Q ss_pred CCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.+.+|||||||||.....++.. +.+|++.|++++||+.+++++..... ..++.....|..+..+..
T Consensus 63 ~~~~iLELGcGtG~~t~~Ll~~l~~~~~~~~iDiS~~mL~~a~~~l~~~~p----~~~v~~i~gD~~~~~~~~------- 131 (301)
T TIGR03438 63 AGCELVELGSGSSRKTRLLLDALRQPARYVPIDISADALKESAAALAADYP----QLEVHGICADFTQPLALP------- 131 (301)
T ss_pred CCCeEEecCCCcchhHHHHHHhhccCCeEEEEECCHHHHHHHHHHHHhhCC----CceEEEEEEcccchhhhh-------
Confidence 5689999999999888777766 57999999999999999999875431 234555555654421100
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
.. . ......+++..-.+++. +....+++.+.+.|+++ +.+++....+
T Consensus 132 ---------~~-~-~~~~~~~~~~gs~~~~~~~~e~~~~L~~i~~~L~pg--G~~lig~d~~ 180 (301)
T TIGR03438 132 ---------PE-P-AAGRRLGFFPGSTIGNFTPEEAVAFLRRIRQLLGPG--GGLLIGVDLV 180 (301)
T ss_pred ---------cc-c-ccCCeEEEEecccccCCCHHHHHHHHHHHHHhcCCC--CEEEEeccCC
Confidence 00 0 00122334444466653 45667899999999765 4566554333
|
This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases |
| >PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=2e-06 Score=84.11 Aligned_cols=98 Identities=18% Similarity=0.153 Sum_probs=71.1
Q ss_pred CCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
+.+|||++||+|..|+.+|... .+|++.|+++.+++.+++|++.|+. .++.+...|....
T Consensus 58 ~~~vLDl~aGsG~~~l~~a~~~~~~~V~a~Din~~Av~~a~~N~~~N~~-----~~~~v~~~Da~~~------------- 119 (382)
T PRK04338 58 RESVLDALSASGIRGIRYALETGVEKVTLNDINPDAVELIKKNLELNGL-----ENEKVFNKDANAL------------- 119 (382)
T ss_pred CCEEEECCCcccHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-----CceEEEhhhHHHH-------------
Confidence 4689999999999999998763 4899999999999999999999984 3344555443221
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+.....||+|+. |. | ....++++..-..+++ +++++++
T Consensus 120 ----------l~~~~~fD~V~l-DP-~--Gs~~~~l~~al~~~~~--~gilyvS 157 (382)
T PRK04338 120 ----------LHEERKFDVVDI-DP-F--GSPAPFLDSAIRSVKR--GGLLCVT 157 (382)
T ss_pred ----------HhhcCCCCEEEE-CC-C--CCcHHHHHHHHHHhcC--CCEEEEE
Confidence 000246999987 66 3 5556777774344543 5788887
|
|
| >PRK11088 rrmA 23S rRNA methyltransferase A; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=3.8e-06 Score=78.25 Aligned_cols=86 Identities=17% Similarity=0.180 Sum_probs=59.1
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC-----CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRVA-----WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~-----~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
.+.+|||+|||+|..+..++... .+|+++|+++.+++.++++. .++.+...|..+..
T Consensus 85 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~----------~~~~~~~~d~~~lp-------- 146 (272)
T PRK11088 85 KATALLDIGCGEGYYTHALADALPEITTMQLFGLDISKVAIKYAAKRY----------PQVTFCVASSHRLP-------- 146 (272)
T ss_pred CCCeEEEECCcCCHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhC----------CCCeEEEeecccCC--------
Confidence 45789999999999888877652 37999999999999987652 23444444433210
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
+ ..+.||+|++. +.+ ..++.+.++|+++|
T Consensus 147 --------------~-~~~sfD~I~~~---~~~----~~~~e~~rvLkpgG 175 (272)
T PRK11088 147 --------------F-ADQSLDAIIRI---YAP----CKAEELARVVKPGG 175 (272)
T ss_pred --------------C-cCCceeEEEEe---cCC----CCHHHHHhhccCCC
Confidence 0 12479999974 333 34577888998764
|
|
| >TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB | Back alignment and domain information |
|---|
Probab=98.39 E-value=6.4e-06 Score=81.73 Aligned_cols=61 Identities=15% Similarity=0.034 Sum_probs=50.2
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccC
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSG 167 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~ 167 (330)
.+|..++.++ ...+|.+|||+|||+|..++.++.. ..+|++.|.++.+++.+++|++.++.
T Consensus 225 ~~s~~~~~~L-------~~~~g~~VLDlcag~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~ 287 (426)
T TIGR00563 225 ASAQWVATWL-------APQNEETILDACAAPGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGL 287 (426)
T ss_pred HHHHHHHHHh-------CCCCCCeEEEeCCCccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCC
Confidence 4566666655 2346789999999999999998876 36999999999999999999998763
|
The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles. |
| >PRK14896 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.3e-06 Score=79.25 Aligned_cols=72 Identities=18% Similarity=0.201 Sum_probs=57.0
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
.-+++.+.+.. ...++.+|||+|||+|..++.+++.+.+|++.|+++.+++.++.|+.. ..++.+...|.
T Consensus 15 ~~~~~~iv~~~---~~~~~~~VLEIG~G~G~lt~~L~~~~~~v~~vEid~~~~~~l~~~~~~-------~~~v~ii~~D~ 84 (258)
T PRK14896 15 DRVVDRIVEYA---EDTDGDPVLEIGPGKGALTDELAKRAKKVYAIELDPRLAEFLRDDEIA-------AGNVEIIEGDA 84 (258)
T ss_pred HHHHHHHHHhc---CCCCcCeEEEEeCccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHhcc-------CCCEEEEEecc
Confidence 33455565543 445788999999999999999999988999999999999999988743 14677777776
Q ss_pred CC
Q 020158 183 MN 184 (330)
Q Consensus 183 ~~ 184 (330)
.+
T Consensus 85 ~~ 86 (258)
T PRK14896 85 LK 86 (258)
T ss_pred cc
Confidence 54
|
|
| >PRK14121 tRNA (guanine-N(7)-)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.7e-06 Score=80.56 Aligned_cols=107 Identities=12% Similarity=0.113 Sum_probs=78.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..+..+||||||+|...+.+|+. ...+++.|+++.++..+.+++..++ ..++.+...|.......
T Consensus 121 ~~~p~vLEIGcGsG~~ll~lA~~~P~~~~iGIEI~~~~i~~a~~ka~~~g-----L~NV~~i~~DA~~ll~~-------- 187 (390)
T PRK14121 121 NQEKILIEIGFGSGRHLLYQAKNNPNKLFIGIEIHTPSIEQVLKQIELLN-----LKNLLIINYDARLLLEL-------- 187 (390)
T ss_pred CCCCeEEEEcCcccHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHHHHcC-----CCcEEEEECCHHHhhhh--------
Confidence 34679999999999999999987 4799999999999999999998887 35688887775432110
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcc------cHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDD------LTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~------~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
+ ..+.+|.|+..=...++. ..+.+++.+.++|++| +.++++.
T Consensus 188 ------------~-~~~s~D~I~lnFPdPW~KkrHRRlv~~~fL~e~~RvLkpG--G~l~l~T 235 (390)
T PRK14121 188 ------------L-PSNSVEKIFVHFPVPWDKKPHRRVISEDFLNEALRVLKPG--GTLELRT 235 (390)
T ss_pred ------------C-CCCceeEEEEeCCCCccccchhhccHHHHHHHHHHHcCCC--cEEEEEE
Confidence 0 235789988642221111 2378999999999875 4566643
|
|
| >TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase | Back alignment and domain information |
|---|
Probab=98.38 E-value=7.1e-06 Score=76.27 Aligned_cols=60 Identities=12% Similarity=0.009 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
..|.+|||+|||+|-.++.+|.. ...|++.|+++.+++.+++|++.++. .++.+...|..
T Consensus 70 ~~g~~VLDl~ag~G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~-----~~v~~~~~D~~ 132 (264)
T TIGR00446 70 DPPERVLDMAAAPGGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGV-----LNVAVTNFDGR 132 (264)
T ss_pred CCcCEEEEECCCchHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-----CcEEEecCCHH
Confidence 46789999999999999888775 35899999999999999999999873 45677666643
|
|
| >PRK14901 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.7e-06 Score=83.60 Aligned_cols=108 Identities=16% Similarity=0.130 Sum_probs=74.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.+|.+|||+|||+|..++.+|.. ..+|++.|+++.+++.+++|+..++. .++.+...|-.+.....
T Consensus 251 ~~g~~VLDl~ag~G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~-----~~v~~~~~D~~~~~~~~------ 319 (434)
T PRK14901 251 QPGEVILDACAAPGGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGL-----KSIKILAADSRNLLELK------ 319 (434)
T ss_pred CCcCEEEEeCCCCchhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCC-----CeEEEEeCChhhccccc------
Confidence 46789999999999999988876 25899999999999999999999873 45777766644321000
Q ss_pred CccccccccCccchhccCCeeEEEEe------ccccCcc----------------cHHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAA------DVIYSDD----------------LTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaa------DviY~~~----------------~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
....+.||.|+.- .++.... ....++..+.++|++|| .++|.
T Consensus 320 -------------~~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG-~lvys 383 (434)
T PRK14901 320 -------------PQWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGG-TLVYA 383 (434)
T ss_pred -------------ccccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC-EEEEE
Confidence 0012479999852 2222211 24677888888888763 44554
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.7e-06 Score=75.50 Aligned_cols=113 Identities=16% Similarity=0.209 Sum_probs=73.4
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CC--eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AW--TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~--~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
++..+...+++.. ..-+|.+|||+|||+|..+-++|.+ +. +|+..|..+.+.+.+++|+...+ ..++.+
T Consensus 56 s~P~~~a~~l~~L---~l~pg~~VLeIGtGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~-----~~nv~~ 127 (209)
T PF01135_consen 56 SAPSMVARMLEAL---DLKPGDRVLEIGTGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLG-----IDNVEV 127 (209)
T ss_dssp --HHHHHHHHHHT---TC-TT-EEEEES-TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHT-----THSEEE
T ss_pred hHHHHHHHHHHHH---hcCCCCEEEEecCCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhc-----cCceeE
Confidence 4444444455553 4568899999999999999999887 43 69999999999999999999887 357888
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...|-... | ....+||.|+..-.+. ..... +.+.|++| +.+++.
T Consensus 128 ~~gdg~~g------------------~-----~~~apfD~I~v~~a~~--~ip~~----l~~qL~~g--GrLV~p 171 (209)
T PF01135_consen 128 VVGDGSEG------------------W-----PEEAPFDRIIVTAAVP--EIPEA----LLEQLKPG--GRLVAP 171 (209)
T ss_dssp EES-GGGT------------------T-----GGG-SEEEEEESSBBS--S--HH----HHHTEEEE--EEEEEE
T ss_pred EEcchhhc------------------c-----ccCCCcCEEEEeeccc--hHHHH----HHHhcCCC--cEEEEE
Confidence 77763322 1 1335899999875553 33333 44556665 444443
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >KOG1271 consensus Methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.6e-06 Score=73.03 Aligned_cols=136 Identities=18% Similarity=0.246 Sum_probs=87.1
Q ss_pred Eeec---hHHHHHHHHhhhcCCCCCCCCC-eEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCC
Q 020158 97 QVWK---AELVLADFVMHKMCTSSDFNGI-ISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFS 170 (330)
Q Consensus 97 ~vW~---aa~~La~~l~~~~~~~~~~~g~-~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~ 170 (330)
-+|= +...+.+|+..+......-+.. +|||||||.|..=.-+++-+ ...+++||++.++++++.-++.++.
T Consensus 40 EvWFg~~ae~riv~wl~d~~~~~rv~~~A~~VlDLGtGNG~~L~~L~~egf~~~L~GvDYs~~AV~LA~niAe~~~~--- 116 (227)
T KOG1271|consen 40 EVWFGEDAEERIVDWLKDLIVISRVSKQADRVLDLGTGNGHLLFQLAKEGFQSKLTGVDYSEKAVELAQNIAERDGF--- 116 (227)
T ss_pred ceecCCcHHHHHHHHHHhhhhhhhhcccccceeeccCCchHHHHHHHHhcCCCCccccccCHHHHHHHHHHHHhcCC---
Confidence 4563 4567788887764100112233 99999999998888888876 3599999999999997776777764
Q ss_pred CCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEe---cccc-C----cccHHHHHHHHHHhcc
Q 020158 171 HQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAA---DVIY-S----DDLTDALFHTLKRLMP 242 (330)
Q Consensus 171 ~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaa---DviY-~----~~~~~~l~~tl~~lL~ 242 (330)
...+++..+|...+.- ..++||+|+-- |.|- + ..-...-+.++.++|+
T Consensus 117 -~n~I~f~q~DI~~~~~-----------------------~~~qfdlvlDKGT~DAisLs~d~~~~r~~~Y~d~v~~ll~ 172 (227)
T KOG1271|consen 117 -SNEIRFQQLDITDPDF-----------------------LSGQFDLVLDKGTLDAISLSPDGPVGRLVVYLDSVEKLLS 172 (227)
T ss_pred -CcceeEEEeeccCCcc-----------------------cccceeEEeecCceeeeecCCCCcccceeeehhhHhhccC
Confidence 3559999999877511 12466666631 1110 0 0111445778899998
Q ss_pred CCCCeEEEEEeeeeCcccccch
Q 020158 243 LGSKKVLYLALEKRYNFSLNDL 264 (330)
Q Consensus 243 ~~~~~~i~va~~~R~~f~~~~~ 264 (330)
++ +++++. .-|||.++|
T Consensus 173 ~~--gifvIt---SCN~T~dEL 189 (227)
T KOG1271|consen 173 PG--GIFVIT---SCNFTKDEL 189 (227)
T ss_pred CC--cEEEEE---ecCccHHHH
Confidence 65 455552 246665544
|
|
| >KOG1500 consensus Protein arginine N-methyltransferase CARM1 [Posttranslational modification, protein turnover, chaperones; Transcription] | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.3e-06 Score=80.44 Aligned_cols=100 Identities=16% Similarity=0.311 Sum_probs=80.3
Q ss_pred CCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 116 SSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 116 ~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
..+|+|+.|||+|||.|++++.+|..| ++|++++.+ +|.+.+++-++.|.. ..++.|.....++
T Consensus 173 ~sDF~~kiVlDVGaGSGILS~FAaqAGA~~vYAvEAS-~MAqyA~~Lv~~N~~----~~rItVI~GKiEd---------- 237 (517)
T KOG1500|consen 173 HSDFQDKIVLDVGAGSGILSFFAAQAGAKKVYAVEAS-EMAQYARKLVASNNL----ADRITVIPGKIED---------- 237 (517)
T ss_pred ccccCCcEEEEecCCccHHHHHHHHhCcceEEEEehh-HHHHHHHHHHhcCCc----cceEEEccCcccc----------
Confidence 478999999999999999999999996 699999997 899999999988854 5788888776554
Q ss_pred CCccccccccCccchhccCCeeEEEEec---cccCcccHHHHHHHHHHhccCCC
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAAD---VIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaD---viY~~~~~~~l~~tl~~lL~~~~ 245 (330)
++..++.|+||.-- .+|+...++.-+.+= +.|+|++
T Consensus 238 --------------ieLPEk~DviISEPMG~mL~NERMLEsYl~Ar-k~l~P~G 276 (517)
T KOG1500|consen 238 --------------IELPEKVDVIISEPMGYMLVNERMLESYLHAR-KWLKPNG 276 (517)
T ss_pred --------------ccCchhccEEEeccchhhhhhHHHHHHHHHHH-hhcCCCC
Confidence 33557899999643 567777777766654 7787764
|
|
| >COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.5e-06 Score=77.37 Aligned_cols=93 Identities=19% Similarity=0.208 Sum_probs=71.8
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.-+..+|.|||||+|...-.++++ ++.|++.|-|++||+.++... .++++...|-.+
T Consensus 28 ~~~~~~v~DLGCGpGnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rl----------p~~~f~~aDl~~----------- 86 (257)
T COG4106 28 LERPRRVVDLGCGPGNSTELLARRWPDAVITGIDSSPAMLAKAAQRL----------PDATFEEADLRT----------- 86 (257)
T ss_pred ccccceeeecCCCCCHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhC----------CCCceecccHhh-----------
Confidence 445679999999999777777766 789999999999999886432 445555444332
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
|. ....+|+|+++-++.+-..+..++.-+-..|.+|
T Consensus 87 --------w~-----p~~~~dllfaNAvlqWlpdH~~ll~rL~~~L~Pg 122 (257)
T COG4106 87 --------WK-----PEQPTDLLFANAVLQWLPDHPELLPRLVSQLAPG 122 (257)
T ss_pred --------cC-----CCCccchhhhhhhhhhccccHHHHHHHHHhhCCC
Confidence 21 2357999999999999999999998888888776
|
|
| >PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=7.8e-06 Score=73.41 Aligned_cols=97 Identities=12% Similarity=0.071 Sum_probs=63.8
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
..+|.+|||||||||..+..+++.. .+|+++|+++ + +. ..++.+...|+.+....
T Consensus 49 ~~~~~~VLDlG~GtG~~t~~l~~~~~~~~~V~aVDi~~-~----------~~-----~~~v~~i~~D~~~~~~~------ 106 (209)
T PRK11188 49 FKPGMTVVDLGAAPGGWSQYAVTQIGDKGRVIACDILP-M----------DP-----IVGVDFLQGDFRDELVL------ 106 (209)
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCCceEEEEeccc-c----------cC-----CCCcEEEecCCCChHHH------
Confidence 3568899999999999998888773 5899999986 1 11 23477888887763100
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcc-----------cHHHHHHHHHHhccCCC
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDD-----------LTDALFHTLKRLMPLGS 245 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~-----------~~~~l~~tl~~lL~~~~ 245 (330)
... . ......+||+|++.-+.+... .+..+++.+.++|++|+
T Consensus 107 -----~~i---~-~~~~~~~~D~V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG 159 (209)
T PRK11188 107 -----KAL---L-ERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGG 159 (209)
T ss_pred -----HHH---H-HHhCCCCCCEEecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 000 0 000135799999855444322 13568899999998764
|
|
| >PRK14903 16S rRNA methyltransferase B; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=9.9e-06 Score=80.49 Aligned_cols=61 Identities=11% Similarity=0.067 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
.+|.+|||+|||+|--++.+|.. +.+|++.|+++.+++.+++|+...+. .++.+...|+..
T Consensus 236 ~~g~~VLD~cagpGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~-----~~v~~~~~Da~~ 299 (431)
T PRK14903 236 EPGLRVLDTCAAPGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKL-----SSIEIKIADAER 299 (431)
T ss_pred CCCCEEEEeCCCccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CeEEEEECchhh
Confidence 46789999999999988888876 46999999999999999999998763 457777777654
|
|
| >COG4122 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.3e-06 Score=75.33 Aligned_cols=103 Identities=7% Similarity=-0.002 Sum_probs=79.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE-ecCCCCCCCCccCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD-LNWMNPWPPIFSLGN 194 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~-ldW~~~~~~~~~~~~ 194 (330)
...++|||+|.++|..++.+|.. ..+++.+|++++..+.+++|+..-+. ..++.+.. +|+.+....
T Consensus 58 ~~~k~iLEiGT~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~----~~~i~~~~~gdal~~l~~------ 127 (219)
T COG4122 58 SGPKRILEIGTAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGV----DDRIELLLGGDALDVLSR------ 127 (219)
T ss_pred cCCceEEEeecccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCC----cceEEEEecCcHHHHHHh------
Confidence 47799999999999999999986 25899999999999999999999875 35576666 566654211
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
...++||+|+. =-+....+.++..+.++|++| +++++
T Consensus 128 ---------------~~~~~fDliFI---DadK~~yp~~le~~~~lLr~G--Gliv~ 164 (219)
T COG4122 128 ---------------LLDGSFDLVFI---DADKADYPEYLERALPLLRPG--GLIVA 164 (219)
T ss_pred ---------------ccCCCccEEEE---eCChhhCHHHHHHHHHHhCCC--cEEEE
Confidence 12468999884 134667888999999999875 34443
|
|
| >PTZ00338 dimethyladenosine transferase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.3e-06 Score=79.74 Aligned_cols=74 Identities=19% Similarity=0.150 Sum_probs=59.2
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
..++.+.... ....+.+|||+|||+|..+..++..+.+|++.|+++.+++.+++|+..++. ..++++...|+.
T Consensus 23 ~i~~~Iv~~~---~~~~~~~VLEIG~G~G~LT~~Ll~~~~~V~avEiD~~li~~l~~~~~~~~~----~~~v~ii~~Dal 95 (294)
T PTZ00338 23 LVLDKIVEKA---AIKPTDTVLEIGPGTGNLTEKLLQLAKKVIAIEIDPRMVAELKKRFQNSPL----ASKLEVIEGDAL 95 (294)
T ss_pred HHHHHHHHhc---CCCCcCEEEEecCchHHHHHHHHHhCCcEEEEECCHHHHHHHHHHHHhcCC----CCcEEEEECCHh
Confidence 3445555543 345678999999999999999998888999999999999999999987542 357888888765
Q ss_pred C
Q 020158 184 N 184 (330)
Q Consensus 184 ~ 184 (330)
+
T Consensus 96 ~ 96 (294)
T PTZ00338 96 K 96 (294)
T ss_pred h
Confidence 5
|
|
| >PLN02476 O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.32 E-value=5.4e-06 Score=77.40 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=74.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
..+.++|||+|+|+|..++.+|.. ..+|+..|.+++.++.+++|++.++. ..++++...+..+..+..
T Consensus 116 ~~~ak~VLEIGT~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl----~~~I~li~GdA~e~L~~l----- 186 (278)
T PLN02476 116 ILGAERCIEVGVYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGV----SHKVNVKHGLAAESLKSM----- 186 (278)
T ss_pred hcCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcCHHHHHHHH-----
Confidence 356799999999999999999975 35799999999999999999999875 357777766544321100
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
. . -....+||+|+.- -+...+...++.+.++|++|
T Consensus 187 --------~--~--~~~~~~FD~VFID---a~K~~Y~~y~e~~l~lL~~G 221 (278)
T PLN02476 187 --------I--Q--NGEGSSYDFAFVD---ADKRMYQDYFELLLQLVRVG 221 (278)
T ss_pred --------H--h--cccCCCCCEEEEC---CCHHHHHHHHHHHHHhcCCC
Confidence 0 0 0012479988742 12567788888888999765
|
|
| >PF05219 DREV: DREV methyltransferase; InterPro: IPR007884 This family contains DREV protein homologues from several eukaryotes | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.3e-05 Score=73.57 Aligned_cols=102 Identities=20% Similarity=0.227 Sum_probs=76.6
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..+..++||||||.|-+...+|..-.+|++|+.++.|...+++ -+ --.+...+|.+.
T Consensus 92 ~~~~~~lLDlGAGdG~VT~~l~~~f~~v~aTE~S~~Mr~rL~~----kg-------~~vl~~~~w~~~------------ 148 (265)
T PF05219_consen 92 DWKDKSLLDLGAGDGEVTERLAPLFKEVYATEASPPMRWRLSK----KG-------FTVLDIDDWQQT------------ 148 (265)
T ss_pred cccCCceEEecCCCcHHHHHHHhhcceEEeecCCHHHHHHHHh----CC-------CeEEehhhhhcc------------
Confidence 3567899999999999999999988899999999888665552 11 112233446542
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
..+||+|.|-.|+=..+....|++.|++.|++++..++-+.++-|
T Consensus 149 --------------~~~fDvIscLNvLDRc~~P~~LL~~i~~~l~p~G~lilAvVlP~~ 193 (265)
T PF05219_consen 149 --------------DFKFDVISCLNVLDRCDRPLTLLRDIRRALKPNGRLILAVVLPFR 193 (265)
T ss_pred --------------CCceEEEeehhhhhccCCHHHHHHHHHHHhCCCCEEEEEEEeccc
Confidence 247999999999999999999999999999886544433444444
|
The function of this protein is unknown []. However, these proteins appear to be related to other methyltransferases. |
| >PRK00274 ksgA 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.30 E-value=8.2e-06 Score=76.17 Aligned_cols=70 Identities=16% Similarity=0.097 Sum_probs=55.8
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
+++.+.... ...++.+|||+|||+|..+..++..+.+|+++|+++.+++.+++|+.. .++.+...|+.+
T Consensus 30 i~~~i~~~l---~~~~~~~VLEiG~G~G~lt~~L~~~~~~v~avE~d~~~~~~~~~~~~~--------~~v~~i~~D~~~ 98 (272)
T PRK00274 30 ILDKIVDAA---GPQPGDNVLEIGPGLGALTEPLLERAAKVTAVEIDRDLAPILAETFAE--------DNLTIIEGDALK 98 (272)
T ss_pred HHHHHHHhc---CCCCcCeEEEeCCCccHHHHHHHHhCCcEEEEECCHHHHHHHHHhhcc--------CceEEEEChhhc
Confidence 345555543 345678999999999999999999988999999999999999887631 467888888776
Q ss_pred C
Q 020158 185 P 185 (330)
Q Consensus 185 ~ 185 (330)
.
T Consensus 99 ~ 99 (272)
T PRK00274 99 V 99 (272)
T ss_pred C
Confidence 4
|
|
| >PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.7e-06 Score=76.18 Aligned_cols=105 Identities=12% Similarity=0.108 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.+.++|||+|+|+|..++.+|.. +.+|+..|.+++..+.+++|+...+. ..++++...|..+..+..
T Consensus 44 ~~~k~vLEIGt~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~----~~~I~~~~gda~~~l~~l------ 113 (205)
T PF01596_consen 44 TRPKRVLEIGTFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGL----DDRIEVIEGDALEVLPEL------ 113 (205)
T ss_dssp HT-SEEEEESTTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTG----GGGEEEEES-HHHHHHHH------
T ss_pred cCCceEEEeccccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCC----CCcEEEEEeccHhhHHHH------
Confidence 56789999999999999999976 57999999999999999999998774 468888887655421100
Q ss_pred CccccccccCccchhc--cCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELKE--VQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~--~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
... .++||+|+.-- +.......+..+.++|++| +++++
T Consensus 114 -------------~~~~~~~~fD~VFiDa---~K~~y~~y~~~~~~ll~~g--gvii~ 153 (205)
T PF01596_consen 114 -------------ANDGEEGQFDFVFIDA---DKRNYLEYFEKALPLLRPG--GVIIA 153 (205)
T ss_dssp -------------HHTTTTTSEEEEEEES---TGGGHHHHHHHHHHHEEEE--EEEEE
T ss_pred -------------HhccCCCceeEEEEcc---cccchhhHHHHHhhhccCC--eEEEE
Confidence 001 24799988532 4667778888888999764 45544
|
The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A .... |
| >PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.5e-06 Score=76.47 Aligned_cols=112 Identities=17% Similarity=0.224 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+.|.+||||=||+|..|+-+..+| ++|++.|.++..+..+++|++.-+. ...+.+...|.......
T Consensus 41 ~~g~~vLDLFaGSGalGlEALSRGA~~v~fVE~~~~a~~~i~~N~~~l~~----~~~~~v~~~d~~~~l~~--------- 107 (183)
T PF03602_consen 41 LEGARVLDLFAGSGALGLEALSRGAKSVVFVEKNRKAIKIIKKNLEKLGL----EDKIRVIKGDAFKFLLK--------- 107 (183)
T ss_dssp HTT-EEEETT-TTSHHHHHHHHTT-SEEEEEES-HHHHHHHHHHHHHHT-----GGGEEEEESSHHHHHHH---------
T ss_pred cCCCeEEEcCCccCccHHHHHhcCCCeEEEEECCHHHHHHHHHHHHHhCC----CcceeeeccCHHHHHHh---------
Confidence 789999999999999999888775 6999999999999999999987653 34567666664332100
Q ss_pred cccccccCccchhccCCeeEEEEeccccCccc-HHHHHHHHH--HhccCCCCeEEEEEeeee
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDL-TDALFHTLK--RLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~-~~~l~~tl~--~lL~~~~~~~i~va~~~R 256 (330)
......+||+|+ .|.=|.... ...++..|. .+|+ .++++++-+.++
T Consensus 108 ----------~~~~~~~fDiIf-lDPPY~~~~~~~~~l~~l~~~~~l~--~~~~ii~E~~~~ 156 (183)
T PF03602_consen 108 ----------LAKKGEKFDIIF-LDPPYAKGLYYEELLELLAENNLLN--EDGLIIIEHSKK 156 (183)
T ss_dssp ----------HHHCTS-EEEEE-E--STTSCHHHHHHHHHHHHTTSEE--EEEEEEEEEETT
T ss_pred ----------hcccCCCceEEE-ECCCcccchHHHHHHHHHHHCCCCC--CCEEEEEEecCC
Confidence 001246899886 567777776 488888877 5664 356777765555
|
They methylate the guanosine in position 966 of 16S rRNA in the assembled 30S particle [].; GO: 0008168 methyltransferase activity, 0031167 rRNA methylation; PDB: 3P9N_A 2ESR_B 2IFT_A 1WS6_A 2FPO_B 2FHP_A. |
| >PF06080 DUF938: Protein of unknown function (DUF938); InterPro: IPR010342 This family consists of several hypothetical proteins from both prokaryotes and eukaryotes | Back alignment and domain information |
|---|
Probab=98.23 E-value=7.6e-06 Score=72.80 Aligned_cols=139 Identities=14% Similarity=0.176 Sum_probs=92.9
Q ss_pred eEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcccc
Q 020158 123 ISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQE 200 (330)
Q Consensus 123 ~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~ 200 (330)
+|||||||||--+...|+. .-+..-||+++..+..++..+...+.. ....-..+|-....-
T Consensus 28 ~vLEiaSGtGqHa~~FA~~lP~l~WqPSD~~~~~~~sI~a~~~~~~~~----Nv~~P~~lDv~~~~w------------- 90 (204)
T PF06080_consen 28 RVLEIASGTGQHAVYFAQALPHLTWQPSDPDDNLRPSIRAWIAEAGLP----NVRPPLALDVSAPPW------------- 90 (204)
T ss_pred eEEEEcCCccHHHHHHHHHCCCCEEcCCCCChHHHhhHHHHHHhcCCc----ccCCCeEeecCCCCC-------------
Confidence 6999999999888888876 568999999998888888888776532 111223344333210
Q ss_pred ccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCCeEEEEEeeeeCcccccchhhhccccchhhhhh
Q 020158 201 RYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYI 278 (330)
Q Consensus 201 ~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~~~i~va~~~R~~f~~~~~d~v~~~y~~f~~~l 278 (330)
.|..........||.|+++.+++-. ..++.|++...++|++++..++|=.+.....+| .++-..|...|
T Consensus 91 --~~~~~~~~~~~~~D~i~~~N~lHI~p~~~~~~lf~~a~~~L~~gG~L~~YGPF~~~G~~t-------s~SN~~FD~sL 161 (204)
T PF06080_consen 91 --PWELPAPLSPESFDAIFCINMLHISPWSAVEGLFAGAARLLKPGGLLFLYGPFNRDGKFT-------SESNAAFDASL 161 (204)
T ss_pred --ccccccccCCCCcceeeehhHHHhcCHHHHHHHHHHHHHhCCCCCEEEEeCCcccCCEeC-------CcHHHHHHHHH
Confidence 0100000123589999999999874 578999999999998876555554444444443 34456788888
Q ss_pred hhhhccccc
Q 020158 279 MEEGEHRRF 287 (330)
Q Consensus 279 ~~~~~~~~~ 287 (330)
+.++..-++
T Consensus 162 r~rdp~~Gi 170 (204)
T PF06080_consen 162 RSRDPEWGI 170 (204)
T ss_pred hcCCCCcCc
Confidence 876643333
|
The function of this family is unknown. |
| >KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.22 E-value=2.6e-05 Score=71.17 Aligned_cols=120 Identities=13% Similarity=0.095 Sum_probs=86.9
Q ss_pred CcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--C------CeEEEEeCchHHHHHHHHHHHH
Q 020158 93 SVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--A------WTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 93 ~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~------~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
..++++|.. .+..++ ...++.+|||++||||-++.-+.+. . .+|++.|++|+||+..++....
T Consensus 82 lGiHRlWKd--~~v~~L-------~p~~~m~~lDvaGGTGDiaFril~~v~s~~~~~~~~V~v~Dinp~mL~vgkqRa~~ 152 (296)
T KOG1540|consen 82 LGIHRLWKD--MFVSKL-------GPGKGMKVLDVAGGTGDIAFRILRHVKSQFGDRESKVTVLDINPHMLAVGKQRAKK 152 (296)
T ss_pred cchhHHHHH--Hhhhcc-------CCCCCCeEEEecCCcchhHHHHHHhhccccCCCCceEEEEeCCHHHHHHHHHHHhh
Confidence 456788832 222322 4567899999999999988888776 2 6899999999999999988866
Q ss_pred ccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 165 NSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 165 N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
-. ... ..++.+...|-.+.+ + +...||....|==|-+-.+.+..++...+.|++|
T Consensus 153 ~~-l~~-~~~~~w~~~dAE~Lp----------------------F-dd~s~D~yTiafGIRN~th~~k~l~EAYRVLKpG 207 (296)
T KOG1540|consen 153 RP-LKA-SSRVEWVEGDAEDLP----------------------F-DDDSFDAYTIAFGIRNVTHIQKALREAYRVLKPG 207 (296)
T ss_pred cC-CCc-CCceEEEeCCcccCC----------------------C-CCCcceeEEEecceecCCCHHHHHHHHHHhcCCC
Confidence 32 211 233555554433321 0 2357999888888888899999999999999988
Q ss_pred CC
Q 020158 245 SK 246 (330)
Q Consensus 245 ~~ 246 (330)
+.
T Consensus 208 Gr 209 (296)
T KOG1540|consen 208 GR 209 (296)
T ss_pred cE
Confidence 64
|
|
| >PF02475 Met_10: Met-10+ like-protein; InterPro: IPR003402 This entry represents the Trm5 family | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.2e-06 Score=74.00 Aligned_cols=94 Identities=16% Similarity=0.182 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHH--hCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSR--VAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~--~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
-+|.+|+|+-||.|..++.+|+ .++.|++.|++|..++.+++|+.+|+. ...+.+...|..+..+
T Consensus 100 ~~~e~VlD~faGIG~f~l~~ak~~~~~~V~A~d~Np~a~~~L~~Ni~lNkv----~~~i~~~~~D~~~~~~--------- 166 (200)
T PF02475_consen 100 KPGEVVLDMFAGIGPFSLPIAKHGKAKRVYAVDLNPDAVEYLKENIRLNKV----ENRIEVINGDAREFLP--------- 166 (200)
T ss_dssp -TT-EEEETT-TTTTTHHHHHHHT-SSEEEEEES-HHHHHHHHHHHHHTT-----TTTEEEEES-GGG------------
T ss_pred CcceEEEEccCCccHHHHHHhhhcCccEEEEecCCHHHHHHHHHHHHHcCC----CCeEEEEcCCHHHhcC---------
Confidence 4688999999999999999999 578999999999999999999999986 4678888888655421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
...+|-|++.-. .....++.....+++.+
T Consensus 167 ---------------~~~~drvim~lp----~~~~~fl~~~~~~~~~~ 195 (200)
T PF02475_consen 167 ---------------EGKFDRVIMNLP----ESSLEFLDAALSLLKEG 195 (200)
T ss_dssp ---------------TT-EEEEEE--T----SSGGGGHHHHHHHEEEE
T ss_pred ---------------ccccCEEEECCh----HHHHHHHHHHHHHhcCC
Confidence 357999988643 33445666666777543
|
Trm5 specifically methylates the N1 position of guanosine-37 in various tRNAs [, , ]. Another members of this family, tRNA wybutosine-synthesizing protein 2 (Tyw2) and its homologues, are S-adenosyl-L-methionine-dependent transferases that act as a component of the wybutosine biosynthesis pathway [, ]. tRNA wybutosine-synthesizing protein 2 was originally thought to be a methyltransferase [].; GO: 0016740 transferase activity; PDB: 3A27_A 2ZZN_B 2YX1_A 2ZZM_A 3AY0_B 3K6R_A 3A26_A 3A25_A. |
| >KOG1541 consensus Predicted protein carboxyl methylase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.2e-05 Score=71.84 Aligned_cols=98 Identities=20% Similarity=0.241 Sum_probs=67.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++.-|||+|||+||.|-++..-|..+++.|+++.||+.+... +.-+ .+.-.|.+...+.
T Consensus 50 ~~~~iLDIGCGsGLSg~vL~~~Gh~wiGvDiSpsML~~a~~~-e~eg---------dlil~DMG~Glpf----------- 108 (270)
T KOG1541|consen 50 KSGLILDIGCGSGLSGSVLSDSGHQWIGVDISPSMLEQAVER-ELEG---------DLILCDMGEGLPF----------- 108 (270)
T ss_pred CCcEEEEeccCCCcchheeccCCceEEeecCCHHHHHHHHHh-hhhc---------CeeeeecCCCCCC-----------
Confidence 678899999999999999999999999999999999998851 1112 2344555554332
Q ss_pred cccccCccchhccCCeeEEEE---------eccccCcc--cHHHHHHHHHHhccCCCCeEE
Q 020158 200 ERYSWNSSELKEVQRASVLLA---------ADVIYSDD--LTDALFHTLKRLMPLGSKKVL 249 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIla---------aDviY~~~--~~~~l~~tl~~lL~~~~~~~i 249 (330)
..+.||-+|. ||--|+.. -+-.|+.||..+|++++.+++
T Consensus 109 -----------rpGtFDg~ISISAvQWLcnA~~s~~~P~~Rl~~FF~tLy~~l~rg~raV~ 158 (270)
T KOG1541|consen 109 -----------RPGTFDGVISISAVQWLCNADKSLHVPKKRLLRFFGTLYSCLKRGARAVL 158 (270)
T ss_pred -----------CCCccceEEEeeeeeeecccCccccChHHHHHHHhhhhhhhhccCceeEE
Confidence 1346775554 33333322 234578889999987765544
|
|
| >COG1092 Predicted SAM-dependent methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.6e-05 Score=76.12 Aligned_cols=112 Identities=15% Similarity=0.054 Sum_probs=81.8
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..+|++||+|=|=||-.|+.+|..|+ +|+.+|.+...|+.+++|+++|+.. ..++.+...|-.+
T Consensus 215 ~~~GkrvLNlFsYTGgfSv~Aa~gGA~~vt~VD~S~~al~~a~~N~~LNg~~---~~~~~~i~~Dvf~------------ 279 (393)
T COG1092 215 LAAGKRVLNLFSYTGGFSVHAALGGASEVTSVDLSKRALEWARENAELNGLD---GDRHRFIVGDVFK------------ 279 (393)
T ss_pred hccCCeEEEecccCcHHHHHHHhcCCCceEEEeccHHHHHHHHHHHHhcCCC---ccceeeehhhHHH------------
Confidence 35699999999999999999999987 9999999999999999999999964 2344554444222
Q ss_pred ccccccccCccchhccCCeeEEEEeccccC---------cccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYS---------DDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~---------~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
|-+.......+||+||.=-.-|- ...+..|+..+.++|+++ ++++++.
T Consensus 280 -------~l~~~~~~g~~fDlIilDPPsF~r~k~~~~~~~rdy~~l~~~~~~iL~pg--G~l~~~s 336 (393)
T COG1092 280 -------WLRKAERRGEKFDLIILDPPSFARSKKQEFSAQRDYKDLNDLALRLLAPG--GTLVTSS 336 (393)
T ss_pred -------HHHHHHhcCCcccEEEECCcccccCcccchhHHHHHHHHHHHHHHHcCCC--CEEEEEe
Confidence 21222234468999997544443 236777888888889765 4555543
|
|
| >PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase [] | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.4e-05 Score=79.55 Aligned_cols=122 Identities=15% Similarity=0.197 Sum_probs=81.0
Q ss_pred CCcCeEeechHHHHH--HHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC------CeEEEEeCchHHHHHHHHHHH
Q 020158 92 PSVGLQVWKAELVLA--DFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA------WTVFLTDHGNYILDNCAKNVQ 163 (330)
Q Consensus 92 ~~~G~~vW~aa~~La--~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~------~~V~~TD~~~~~L~~~~~Nv~ 163 (330)
+.+=....+.|+..| ++.... ....+++.||++|||+|.++..+++.+ .+|++.+-++.+...++..+.
T Consensus 159 D~vKY~~Ye~AI~~al~D~~~~~---~~~~~~~vVldVGAGrGpL~~~al~A~~~~~~a~~VyAVEkn~~A~~~l~~~v~ 235 (448)
T PF05185_consen 159 DPVKYDQYERAIEEALKDRVRKN---SYSSKDKVVLDVGAGRGPLSMFALQAGARAGGAVKVYAVEKNPNAVVTLQKRVN 235 (448)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTTS----SEETT-EEEEES-TTSHHHHHHHHTTHHHCCESEEEEEESSTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhhhhc---cccccceEEEEeCCCccHHHHHHHHHHHHhCCCeEEEEEcCCHhHHHHHHHHHH
Confidence 444455556665322 333221 122367899999999999998887764 699999999988888887777
Q ss_pred HccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEE--eccccCcccHHHHHHHHHHhc
Q 020158 164 LNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLA--ADVIYSDDLTDALFHTLKRLM 241 (330)
Q Consensus 164 ~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIla--aDviY~~~~~~~l~~tl~~lL 241 (330)
.|+. .++|++..-|-.+. +...++|+||. -..+=+.++.+..+....++|
T Consensus 236 ~n~w----~~~V~vi~~d~r~v------------------------~lpekvDIIVSElLGsfg~nEl~pE~Lda~~rfL 287 (448)
T PF05185_consen 236 ANGW----GDKVTVIHGDMREV------------------------ELPEKVDIIVSELLGSFGDNELSPECLDAADRFL 287 (448)
T ss_dssp HTTT----TTTEEEEES-TTTS------------------------CHSS-EEEEEE---BTTBTTTSHHHHHHHGGGGE
T ss_pred hcCC----CCeEEEEeCcccCC------------------------CCCCceeEEEEeccCCccccccCHHHHHHHHhhc
Confidence 8874 57899998876653 23458999985 223334456677788999999
Q ss_pred cCC
Q 020158 242 PLG 244 (330)
Q Consensus 242 ~~~ 244 (330)
+++
T Consensus 288 kp~ 290 (448)
T PF05185_consen 288 KPD 290 (448)
T ss_dssp EEE
T ss_pred CCC
Confidence 875
|
These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B .... |
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.1e-05 Score=75.81 Aligned_cols=101 Identities=15% Similarity=0.174 Sum_probs=69.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHcc-CCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNS-GVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~-~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
++++||+||||+|.++..+++. ..+|++.|+++.+++.+++++.... .... ..++++...|-.....
T Consensus 76 ~p~~VL~iG~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~-d~rv~v~~~Da~~~l~--------- 145 (283)
T PRK00811 76 NPKRVLIIGGGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYD-DPRVELVIGDGIKFVA--------- 145 (283)
T ss_pred CCCEEEEEecCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhcccccc-CCceEEEECchHHHHh---------
Confidence 4689999999999999888876 3689999999999999999885422 1111 3566666665332100
Q ss_pred ccccccccCccchhccCCeeEEEEeccc--cCcc---cHHHHHHHHHHhccCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVI--YSDD---LTDALFHTLKRLMPLG 244 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDvi--Y~~~---~~~~l~~tl~~lL~~~ 244 (330)
...++||+|+. |.. +.+. ....+++.++++|+++
T Consensus 146 -------------~~~~~yDvIi~-D~~dp~~~~~~l~t~ef~~~~~~~L~~g 184 (283)
T PRK00811 146 -------------ETENSFDVIIV-DSTDPVGPAEGLFTKEFYENCKRALKED 184 (283)
T ss_pred -------------hCCCcccEEEE-CCCCCCCchhhhhHHHHHHHHHHhcCCC
Confidence 01358999996 331 1111 2477889999999765
|
|
| >KOG3420 consensus Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.9e-06 Score=70.21 Aligned_cols=63 Identities=19% Similarity=0.212 Sum_probs=51.2
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.++.|+.+++||||||.+++.++..+ ..|++.|++|++|+.+.+|++.-. -++.+...+..+.
T Consensus 45 gdiEgkkl~DLgcgcGmLs~a~sm~~~e~vlGfDIdpeALEIf~rNaeEfE------vqidlLqcdildl 108 (185)
T KOG3420|consen 45 GDIEGKKLKDLGCGCGMLSIAFSMPKNESVLGFDIDPEALEIFTRNAEEFE------VQIDLLQCDILDL 108 (185)
T ss_pred ccccCcchhhhcCchhhhHHHhhcCCCceEEeeecCHHHHHHHhhchHHhh------hhhheeeeeccch
Confidence 67999999999999999998888774 689999999999999999997654 3345555554443
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.6e-05 Score=69.85 Aligned_cols=98 Identities=14% Similarity=0.048 Sum_probs=60.6
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
..-+|.+|||+|||+|..+..+++.. .+|+++|+++.+ . ..++.+...|+.+.....
T Consensus 29 ~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----------~-----~~~i~~~~~d~~~~~~~~---- 88 (188)
T TIGR00438 29 LIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----------P-----IENVDFIRGDFTDEEVLN---- 88 (188)
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----------c-----CCCceEEEeeCCChhHHH----
Confidence 44678999999999999888887763 479999999743 1 123556666655421000
Q ss_pred CCCccccccccCccchhccCCeeEEEEecccc-----Ccc------cHHHHHHHHHHhccCCC
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIY-----SDD------LTDALFHTLKRLMPLGS 245 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY-----~~~------~~~~l~~tl~~lL~~~~ 245 (330)
.. .......+||+|++.-..+ ... ..+.+++.+.++|++++
T Consensus 89 -------~l----~~~~~~~~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG 140 (188)
T TIGR00438 89 -------KI----RERVGDDKVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKG 140 (188)
T ss_pred -------HH----HHHhCCCCccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCC
Confidence 00 0000134799999742211 111 23678889999998764
|
|
| >TIGR00755 ksgA dimethyladenosine transferase | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.2e-05 Score=72.43 Aligned_cols=71 Identities=17% Similarity=0.156 Sum_probs=55.4
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
+++.+.+.. ...++.+|||+|||+|..+..++..+..|++.|.++.+++.++.++.. ..++.+...|..+
T Consensus 17 i~~~i~~~~---~~~~~~~VLEiG~G~G~lt~~L~~~~~~v~~iE~d~~~~~~l~~~~~~-------~~~v~v~~~D~~~ 86 (253)
T TIGR00755 17 VIQKIVEAA---NVLEGDVVLEIGPGLGALTEPLLKRAKKVTAIEIDPRLAEILRKLLSL-------YERLEVIEGDALK 86 (253)
T ss_pred HHHHHHHhc---CCCCcCEEEEeCCCCCHHHHHHHHhCCcEEEEECCHHHHHHHHHHhCc-------CCcEEEEECchhc
Confidence 344555442 345678999999999999999999988999999999999999988743 2467777777655
Q ss_pred C
Q 020158 185 P 185 (330)
Q Consensus 185 ~ 185 (330)
.
T Consensus 87 ~ 87 (253)
T TIGR00755 87 V 87 (253)
T ss_pred C
Confidence 3
|
Alternate name: S-adenosylmethionine--6-N',N'-adenosyl (rRNA) dimethyltransferase |
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.4e-05 Score=74.40 Aligned_cols=106 Identities=14% Similarity=0.150 Sum_probs=69.1
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
++++||+||||+|..+..+++. ..+|+++|+++.+++.+++++........ ..++++...|..+...
T Consensus 72 ~p~~VL~iG~G~G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~-~~~v~i~~~D~~~~l~---------- 140 (270)
T TIGR00417 72 NPKHVLVIGGGDGGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYD-DPRVDLQIDDGFKFLA---------- 140 (270)
T ss_pred CCCEEEEEcCCchHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhccccc-CCceEEEECchHHHHH----------
Confidence 4579999999999888777666 36899999999999999998754322111 2455555433211100
Q ss_pred cccccccCccchhccCCeeEEEEeccccC---cc--cHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYS---DD--LTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~---~~--~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
...++||+|+. |.... .. ....+++.+.++|+++ +++++
T Consensus 141 ------------~~~~~yDvIi~-D~~~~~~~~~~l~~~ef~~~~~~~L~pg--G~lv~ 184 (270)
T TIGR00417 141 ------------DTENTFDVIIV-DSTDPVGPAETLFTKEFYELLKKALNED--GIFVA 184 (270)
T ss_pred ------------hCCCCccEEEE-eCCCCCCcccchhHHHHHHHHHHHhCCC--cEEEE
Confidence 01358999996 33311 11 1577889999999775 34444
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >PF00891 Methyltransf_2: O-methyltransferase; InterPro: IPR001077 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.2e-05 Score=69.80 Aligned_cols=98 Identities=16% Similarity=0.217 Sum_probs=75.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+.++|||||+|.|..++.+++. +.++++-|+ |++++.++. ..++++...|+.+..
T Consensus 100 ~~~~vvDvGGG~G~~~~~l~~~~P~l~~~v~Dl-p~v~~~~~~-----------~~rv~~~~gd~f~~~----------- 156 (241)
T PF00891_consen 100 GFKTVVDVGGGSGHFAIALARAYPNLRATVFDL-PEVIEQAKE-----------ADRVEFVPGDFFDPL----------- 156 (241)
T ss_dssp TSSEEEEET-TTSHHHHHHHHHSTTSEEEEEE--HHHHCCHHH-----------TTTEEEEES-TTTCC-----------
T ss_pred CccEEEeccCcchHHHHHHHHHCCCCcceeecc-Hhhhhcccc-----------ccccccccccHHhhh-----------
Confidence 4578999999999999999887 579999999 688888877 278999999988431
Q ss_pred cccccccCccchhccCCeeEEEEeccccC--cccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYS--DDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
.. +|+|+.+.|+++ ++....+++.+...|++++.+.++|.-..
T Consensus 157 --------------P~-~D~~~l~~vLh~~~d~~~~~iL~~~~~al~pg~~g~llI~e~~ 201 (241)
T PF00891_consen 157 --------------PV-ADVYLLRHVLHDWSDEDCVKILRNAAAALKPGKDGRLLIIEMV 201 (241)
T ss_dssp --------------SS-ESEEEEESSGGGS-HHHHHHHHHHHHHHSEECTTEEEEEEEEE
T ss_pred --------------cc-ccceeeehhhhhcchHHHHHHHHHHHHHhCCCCCCeEEEEeec
Confidence 13 999999999976 56777899999999987634556654333
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This domain includes a range of O-methyltransferases some of which utilise S-adenosyl methionine as substrate []. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. In eukaryotes, DNA methylation has been implicated in the control of several cellular processes, including differentiation, gene regulation, and embryonic development. O-methyltransferases have a common catalytic domain structure, which might be universal among S-adenosyl-L-methionine (AdoMet)-dependent methyltransferases []. Comparative analysis of the predicted amino acid sequences of a number of plant O-methyltransferase cDNA clones show that they share some 32-71% sequence identity, and can be grouped according to the different compounds they utilise as substrates [].; GO: 0008171 O-methyltransferase activity; PDB: 1FPQ_A 1FP1_D 3P9K_B 3P9I_D 3P9C_A 3I53_A 3I5U_A 3I64_A 3I58_A 1ZG3_A .... |
| >TIGR00308 TRM1 tRNA(guanine-26,N2-N2) methyltransferase | Back alignment and domain information |
|---|
Probab=98.12 E-value=1e-05 Score=78.72 Aligned_cols=99 Identities=15% Similarity=0.146 Sum_probs=72.7
Q ss_pred CCeEEEEcCccCHHHHHHHHh--C-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 121 GIISLELGAGTGLAGILLSRV--A-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~--~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+.+|||+.||+|..||.++.. | .+|++.|+++.+++.+++|+++|+. .++.+...|......
T Consensus 45 ~~~vLD~faGsG~rgir~a~e~~ga~~Vv~nD~n~~Av~~i~~N~~~N~~-----~~~~v~~~Da~~~l~---------- 109 (374)
T TIGR00308 45 YINIADALSASGIRAIRYAHEIEGVREVFANDINPKAVESIKNNVEYNSV-----ENIEVPNEDAANVLR---------- 109 (374)
T ss_pred CCEEEECCCchhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHhCC-----CcEEEEchhHHHHHH----------
Confidence 468999999999999999987 3 6899999999999999999999973 456666555433210
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
....+||+|.. |. |. ...++++.+-+.++.+ +.++++
T Consensus 110 ------------~~~~~fDvIdl-DP-fG--s~~~fld~al~~~~~~--glL~vT 146 (374)
T TIGR00308 110 ------------YRNRKFHVIDI-DP-FG--TPAPFVDSAIQASAER--GLLLVT 146 (374)
T ss_pred ------------HhCCCCCEEEe-CC-CC--CcHHHHHHHHHhcccC--CEEEEE
Confidence 01247999887 77 42 3356777777777543 466665
|
This enzyme is responsible for two methylations of a characteristic guanine of most tRNA molecules. The activity has been demonstrated for eukaryotic and archaeal proteins, which are active when expressed in E. coli, a species that lacks this enzyme. At least one Eubacterium, Aquifex aeolicus, has an ortholog, as do all completed archaeal genomes. |
| >COG2265 TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.8e-05 Score=78.46 Aligned_cols=119 Identities=17% Similarity=0.198 Sum_probs=85.7
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
+..|..+..+.. ....+.+||||=||.|..|+.+|+..++|+++++++++++.+++|++.|+. .++.+...+
T Consensus 278 ~ekl~~~a~~~~---~~~~~~~vlDlYCGvG~f~l~lA~~~~~V~gvEi~~~aV~~A~~NA~~n~i-----~N~~f~~~~ 349 (432)
T COG2265 278 AEKLYETALEWL---ELAGGERVLDLYCGVGTFGLPLAKRVKKVHGVEISPEAVEAAQENAAANGI-----DNVEFIAGD 349 (432)
T ss_pred HHHHHHHHHHHH---hhcCCCEEEEeccCCChhhhhhcccCCEEEEEecCHHHHHHHHHHHHHcCC-----CcEEEEeCC
Confidence 445666666553 345668999999999999999999999999999999999999999999994 568888776
Q ss_pred CCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 182 WMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 182 W~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
-.+..+. |. ....+|+||.--. ....-+.+++.|.++ ++..++|+|+
T Consensus 350 ae~~~~~---------------~~-----~~~~~d~VvvDPP--R~G~~~~~lk~l~~~---~p~~IvYVSC 396 (432)
T COG2265 350 AEEFTPA---------------WW-----EGYKPDVVVVDPP--RAGADREVLKQLAKL---KPKRIVYVSC 396 (432)
T ss_pred HHHHhhh---------------cc-----ccCCCCEEEECCC--CCCCCHHHHHHHHhc---CCCcEEEEeC
Confidence 5443211 10 2347888874211 022445666666655 4678999986
|
|
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.08 E-value=7.4e-05 Score=68.28 Aligned_cols=102 Identities=14% Similarity=0.074 Sum_probs=78.6
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
....|.+|||.|.|+|..+.++|+. | .+|+.-|+.++.++.+++|+..-+. ..++....-|-.+..
T Consensus 91 gi~pg~rVlEAGtGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l----~d~v~~~~~Dv~~~~------- 159 (256)
T COG2519 91 GISPGSRVLEAGTGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGL----GDRVTLKLGDVREGI------- 159 (256)
T ss_pred CCCCCCEEEEcccCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhcc----ccceEEEeccccccc-------
Confidence 5668999999999999999999975 3 5899999999999999999988643 244666654433321
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
....||.|+. |-......+..+..+|++++..++|+
T Consensus 160 -----------------~~~~vDav~L-----Dmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 160 -----------------DEEDVDAVFL-----DLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred -----------------cccccCEEEE-----cCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 1237888763 56677889999999999986666665
|
|
| >PLN02589 caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=98.05 E-value=3.4e-05 Score=71.04 Aligned_cols=108 Identities=13% Similarity=0.071 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.+.++|||||+++|+.++.+|.. ..+|+..|.+++..+.++.|++..+. ..++++...+..+..+....
T Consensus 78 ~~ak~iLEiGT~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~----~~~I~~~~G~a~e~L~~l~~---- 149 (247)
T PLN02589 78 INAKNTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGV----AHKIDFREGPALPVLDQMIE---- 149 (247)
T ss_pred hCCCEEEEEeChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC----CCceEEEeccHHHHHHHHHh----
Confidence 46689999999999999999875 46899999999999999999998765 46788777765443111000
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
.....++||+|+.- -+...+...+..+.++|++| +++++
T Consensus 150 ------------~~~~~~~fD~iFiD---adK~~Y~~y~~~~l~ll~~G--Gviv~ 188 (247)
T PLN02589 150 ------------DGKYHGTFDFIFVD---ADKDNYINYHKRLIDLVKVG--GVIGY 188 (247)
T ss_pred ------------ccccCCcccEEEec---CCHHHhHHHHHHHHHhcCCC--eEEEE
Confidence 00012579998842 22556677778888899764 44443
|
|
| >PRK13256 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.01 E-value=9.1e-05 Score=67.28 Aligned_cols=127 Identities=9% Similarity=0.054 Sum_probs=84.7
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHH-------ccCCCCCCCe
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQL-------NSGVFSHQGS 174 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~-------N~~~~~~~~~ 174 (330)
.-.|.+|+... ..-++.+||..|||.|.-.+.+|..|.+|++.|+++..++.+.+.... +....-....
T Consensus 29 np~L~~~~~~l----~~~~~~rvLvPgCGkg~D~~~LA~~G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~ 104 (226)
T PRK13256 29 NEFLVKHFSKL----NINDSSVCLIPMCGCSIDMLFFLSKGVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDD 104 (226)
T ss_pred CHHHHHHHHhc----CCCCCCeEEEeCCCChHHHHHHHhCCCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCc
Confidence 45666776443 222578999999999999999999999999999999998877542111 0000001346
Q ss_pred eEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEE--EeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 175 VHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLL--AADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 175 v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIl--aaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+++...|+.+..+.. ...++||+|. ++=|-..++.-...++.|.++|++++. .+++.
T Consensus 105 i~~~~gD~f~l~~~~--------------------~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~-llll~ 163 (226)
T PRK13256 105 IEIYVADIFNLPKIA--------------------NNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQ-ILLLV 163 (226)
T ss_pred eEEEEccCcCCCccc--------------------cccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcE-EEEEE
Confidence 777777766542100 1235789866 444445677888899999999988743 44444
Q ss_pred e
Q 020158 253 L 253 (330)
Q Consensus 253 ~ 253 (330)
+
T Consensus 164 ~ 164 (226)
T PRK13256 164 M 164 (226)
T ss_pred E
Confidence 4
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=98.00 E-value=3e-05 Score=74.83 Aligned_cols=101 Identities=20% Similarity=0.189 Sum_probs=67.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHH---HccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQ---LNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~---~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
.+.++||+||||+|.+...+.+.. .+|++.|++++|++.++.... .|...+. ..++++...|-.+...
T Consensus 149 ~~PkrVLIIGgGdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~-DpRV~vvi~Da~~fL~------ 221 (374)
T PRK01581 149 IDPKRVLILGGGDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFF-DNRVNVHVCDAKEFLS------ 221 (374)
T ss_pred CCCCEEEEECCCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCC-CCceEEEECcHHHHHH------
Confidence 456899999999998877777764 699999999999999996321 2322111 3566666555332110
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCc-------ccHHHHHHHHHHhccCC
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSD-------DLTDALFHTLKRLMPLG 244 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~-------~~~~~l~~tl~~lL~~~ 244 (330)
...++||+|+. |+ .++ -....+++.+.+.|+++
T Consensus 222 ----------------~~~~~YDVIIv-Dl-~DP~~~~~~~LyT~EFy~~~~~~LkPg 261 (374)
T PRK01581 222 ----------------SPSSLYDVIII-DF-PDPATELLSTLYTSELFARIATFLTED 261 (374)
T ss_pred ----------------hcCCCccEEEE-cC-CCccccchhhhhHHHHHHHHHHhcCCC
Confidence 11357999995 43 222 12367889999999775
|
|
| >PRK03612 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.8e-05 Score=79.09 Aligned_cols=106 Identities=21% Similarity=0.190 Sum_probs=71.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHH---ccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQL---NSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~---N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
++++||++|||+|.....+++.. .+|++.|+++++++.+++|... |..... .+++++..-|-.+..
T Consensus 297 ~~~rVL~IG~G~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~-dprv~vi~~Da~~~l-------- 367 (521)
T PRK03612 297 RPRRVLVLGGGDGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALD-DPRVTVVNDDAFNWL-------- 367 (521)
T ss_pred CCCeEEEEcCCccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccC-CCceEEEEChHHHHH--------
Confidence 56899999999999998888774 6999999999999999997533 321121 346666655422210
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCc------ccHHHHHHHHHHhccCCCCeEEEE
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSD------DLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~------~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
....++||+|+.. .-... -....+++.++++|+++ +++++
T Consensus 368 --------------~~~~~~fDvIi~D-~~~~~~~~~~~L~t~ef~~~~~~~L~pg--G~lv~ 413 (521)
T PRK03612 368 --------------RKLAEKFDVIIVD-LPDPSNPALGKLYSVEFYRLLKRRLAPD--GLLVV 413 (521)
T ss_pred --------------HhCCCCCCEEEEe-CCCCCCcchhccchHHHHHHHHHhcCCC--eEEEE
Confidence 0013589999984 32211 12456889999999775 45554
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=97.91 E-value=7.7e-05 Score=70.91 Aligned_cols=102 Identities=14% Similarity=0.081 Sum_probs=69.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+.++||+||||.|.+...+++. ..+|++.|+++.+++.+++.+..-...+. ..++++...|-......
T Consensus 91 ~pkrVLiIGgG~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~-dpRv~vi~~Da~~~l~~--------- 160 (308)
T PLN02366 91 NPKKVLVVGGGDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFD-DPRVNLHIGDGVEFLKN--------- 160 (308)
T ss_pred CCCeEEEEcCCccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccC-CCceEEEEChHHHHHhh---------
Confidence 4689999999999988888887 36899999999999999998754211111 35677776652211000
Q ss_pred cccccccCccchhccCCeeEEEEeccccCc-----ccHHHHHHHHHHhccCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSD-----DLTDALFHTLKRLMPLG 244 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~-----~~~~~l~~tl~~lL~~~ 244 (330)
. ..++||+|+. |..-.. -....+++.+.++|+++
T Consensus 161 -----------~-~~~~yDvIi~-D~~dp~~~~~~L~t~ef~~~~~~~L~pg 199 (308)
T PLN02366 161 -----------A-PEGTYDAIIV-DSSDPVGPAQELFEKPFFESVARALRPG 199 (308)
T ss_pred -----------c-cCCCCCEEEE-cCCCCCCchhhhhHHHHHHHHHHhcCCC
Confidence 0 1247999996 432111 12457899999999775
|
|
| >PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes | Back alignment and domain information |
|---|
Probab=97.89 E-value=4.3e-05 Score=69.08 Aligned_cols=126 Identities=15% Similarity=0.198 Sum_probs=84.6
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHH-HHHH-HccCCCC-----CCCe
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCA-KNVQ-LNSGVFS-----HQGS 174 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~-~Nv~-~N~~~~~-----~~~~ 174 (330)
+..|.+|+... ..-.+.+||..|||.|.-.+.+|..|.+|++.|+++.+++.+. +|.. .+..... ..++
T Consensus 23 ~p~L~~~~~~l----~~~~~~rvLvPgCG~g~D~~~La~~G~~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~ 98 (218)
T PF05724_consen 23 NPALVEYLDSL----ALKPGGRVLVPGCGKGYDMLWLAEQGHDVVGVDLSPTAIEQAFEENNLEPTVTSVGGFKRYQAGR 98 (218)
T ss_dssp THHHHHHHHHH----TTSTSEEEEETTTTTSCHHHHHHHTTEEEEEEES-HHHHHHHHHHCTTEEECTTCTTEEEETTSS
T ss_pred CHHHHHHHHhc----CCCCCCeEEEeCCCChHHHHHHHHCCCeEEEEecCHHHHHHHHHHhccCCCcccccceeeecCCc
Confidence 66788887663 3345679999999999999999999999999999999888873 2322 1111110 1345
Q ss_pred eEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEe--ccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 175 VHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAA--DVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 175 v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaa--DviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+++...|..+..+ ...++||+|.=. =|--.++.-+.-++.+.++|++++. .++++
T Consensus 99 i~~~~gDfF~l~~----------------------~~~g~fD~iyDr~~l~Alpp~~R~~Ya~~l~~ll~p~g~-~lLi~ 155 (218)
T PF05724_consen 99 ITIYCGDFFELPP----------------------EDVGKFDLIYDRTFLCALPPEMRERYAQQLASLLKPGGR-GLLIT 155 (218)
T ss_dssp EEEEES-TTTGGG----------------------SCHHSEEEEEECSSTTTS-GGGHHHHHHHHHHCEEEEEE-EEEEE
T ss_pred eEEEEcccccCCh----------------------hhcCCceEEEEecccccCCHHHHHHHHHHHHHHhCCCCc-EEEEE
Confidence 6777777665321 122579999843 3445578889999999999988643 34444
Q ss_pred ee
Q 020158 253 LE 254 (330)
Q Consensus 253 ~~ 254 (330)
+.
T Consensus 156 l~ 157 (218)
T PF05724_consen 156 LE 157 (218)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B. |
| >PF10672 Methyltrans_SAM: S-adenosylmethionine-dependent methyltransferase; InterPro: IPR019614 Members of this entry are S-adenosylmethionine-dependent methyltransferases from gamma-proteobacterial species | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.0001 Score=69.14 Aligned_cols=109 Identities=17% Similarity=0.094 Sum_probs=75.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+|++||+|=|=||-.|+.++..| .+|+..|.+..+|+.+++|+.+|+.. ..++++...|..+...
T Consensus 122 ~~gkrvLnlFsYTGgfsv~Aa~gGA~~v~~VD~S~~al~~a~~N~~lNg~~---~~~~~~~~~Dvf~~l~---------- 188 (286)
T PF10672_consen 122 AKGKRVLNLFSYTGGFSVAAAAGGAKEVVSVDSSKRALEWAKENAALNGLD---LDRHRFIQGDVFKFLK---------- 188 (286)
T ss_dssp CTTCEEEEET-TTTHHHHHHHHTTESEEEEEES-HHHHHHHHHHHHHTT-C---CTCEEEEES-HHHHHH----------
T ss_pred cCCCceEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC---ccceEEEecCHHHHHH----------
Confidence 478999999999999999998886 48999999999999999999999853 3567777766543210
Q ss_pred cccccccCccchhccCCeeEEEEeccccCc------ccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSD------DLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~------~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.+....+||+||.--.-|-. ..+..|+..+.++++++ +.++++
T Consensus 189 ----------~~~~~~~fD~IIlDPPsF~k~~~~~~~~y~~L~~~a~~ll~~g--G~l~~~ 237 (286)
T PF10672_consen 189 ----------RLKKGGRFDLIILDPPSFAKSKFDLERDYKKLLRRAMKLLKPG--GLLLTC 237 (286)
T ss_dssp ----------HHHHTT-EEEEEE--SSEESSTCEHHHHHHHHHHHHHHTEEEE--EEEEEE
T ss_pred ----------HHhcCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHhcCCC--CEEEEE
Confidence 12234689999975444432 25666777788888764 444443
|
The diversity in the roles of methylation is matched by the almost bewildering number of methyltransferase enzymes that catalyse the methylation reaction. Although several classes of methyltransferase enzymes are known, the great majority of methylation reactions are catalysed by the S-adenosylmethionine-dependent methyltransferases. SAM (S-adenosylmethionine, also known as AdoMet) is well known as the methyl donor for the majority of methyltransferases that modify DNA, RNA, histones and other proteins, dictating replicational, transcriptional and translational fidelity, mismatch repair, chromatin modelling, epigenetic modifications and imprinting [].; GO: 0008168 methyltransferase activity; PDB: 2IGT_B 1WXX_A 1WXW_D 2CWW_B 2AS0_B 3V8V_B 3V97_A 3C0K_A 2B78_A 3LDF_A. |
| >COG4076 Predicted RNA methylase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.5e-05 Score=67.24 Aligned_cols=57 Identities=16% Similarity=0.123 Sum_probs=50.8
Q ss_pred CeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 122 IISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
..+-|||+|+|.+|+++|+.+.+|++...+|.....+.+|+..|+ ..++.+...|-.
T Consensus 34 d~~~DLGaGsGiLs~~Aa~~A~rViAiE~dPk~a~~a~eN~~v~g-----~~n~evv~gDA~ 90 (252)
T COG4076 34 DTFADLGAGSGILSVVAAHAAERVIAIEKDPKRARLAEENLHVPG-----DVNWEVVVGDAR 90 (252)
T ss_pred hceeeccCCcchHHHHHHhhhceEEEEecCcHHHHHhhhcCCCCC-----CcceEEEecccc
Confidence 578999999999999999999999999999999999999998887 467787776643
|
|
| >KOG2187 consensus tRNA uracil-5-methyltransferase and related tRNA-modifying enzymes [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00016 Score=71.83 Aligned_cols=127 Identities=16% Similarity=0.172 Sum_probs=89.6
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEe
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDL 180 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~l 180 (330)
+|-+|-.++-++. ..-.++.++|+-||||+.|+++|+..++|++..++++.++-++.|+..|+. .++++...
T Consensus 367 ~aevLys~i~e~~---~l~~~k~llDv~CGTG~iglala~~~~~ViGvEi~~~aV~dA~~nA~~Ngi-----sNa~Fi~g 438 (534)
T KOG2187|consen 367 AAEVLYSTIGEWA---GLPADKTLLDVCCGTGTIGLALARGVKRVIGVEISPDAVEDAEKNAQINGI-----SNATFIVG 438 (534)
T ss_pred HHHHHHHHHHHHh---CCCCCcEEEEEeecCCceehhhhccccceeeeecChhhcchhhhcchhcCc-----cceeeeec
Confidence 3567778887775 445568999999999999999999999999999999999999999999994 66676666
Q ss_pred cCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 181 NWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 181 dW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
.-.+..+.... .....-++|.-.|-=- ..++..+++.|...-+ ++..+|++...+
T Consensus 439 qaE~~~~sl~~------------------~~~~~~~~v~iiDPpR-~Glh~~~ik~l~~~~~--~~rlvyvSCn~~ 493 (534)
T KOG2187|consen 439 QAEDLFPSLLT------------------PCCDSETLVAIIDPPR-KGLHMKVIKALRAYKN--PRRLVYVSCNPH 493 (534)
T ss_pred chhhccchhcc------------------cCCCCCceEEEECCCc-ccccHHHHHHHHhccC--ccceEEEEcCHH
Confidence 33332221100 0012334444333322 4577788887777763 467888887665
|
|
| >KOG2899 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00023 Score=64.61 Aligned_cols=134 Identities=15% Similarity=0.191 Sum_probs=78.4
Q ss_pred CCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCC-------eeEEEEecCCCCC
Q 020158 116 SSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQG-------SVHVRDLNWMNPW 186 (330)
Q Consensus 116 ~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~-------~v~v~~ldW~~~~ 186 (330)
.+.|.++.+||+||-+|.+++.+|+. ...|++.|+++.++..+++|+..-........ .+....+.=....
T Consensus 54 ~~~f~~~~~LDIGCNsG~lt~~iak~F~~r~iLGvDID~~LI~~Ark~~r~~~~~~~~~~~~~~~~~~~~~~~is~~~~a 133 (288)
T KOG2899|consen 54 KDWFEPKQALDIGCNSGFLTLSIAKDFGPRRILGVDIDPVLIQRARKEIRFPCDHETEVSGKFPASFGVQFGPISQRNEA 133 (288)
T ss_pred ccccCcceeEeccCCcchhHHHHHHhhccceeeEeeccHHHHHHHHHhccccccccccccCCCccccccccccccccccc
Confidence 36789999999999999999999987 57899999999999999999866432211000 0000000000000
Q ss_pred CCC---ccCCCCCccccccccCcc-chh-ccCCeeEEEEeccccC------cccHHHHHHHHHHhccCCCCeEEEE
Q 020158 187 PPI---FSLGNSSASQERYSWNSS-ELK-EVQRASVLLAADVIYS------DDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 187 ~~~---~~~~~~~~~~~~~~w~~~-~~~-~~~~~DlIlaaDviY~------~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
+.. .+..|..-....+-.... .+. ....||+|+|--+.-+ ++=+..|++.|.++|.+| +++++
T Consensus 134 ~~a~t~~~p~n~~f~~~n~vle~~dfl~~~~~~fDiIlcLSiTkWIHLNwgD~GL~~ff~kis~ll~pg--GiLvv 207 (288)
T KOG2899|consen 134 DRAFTTDFPDNVWFQKENYVLESDDFLDMIQPEFDIILCLSITKWIHLNWGDDGLRRFFRKISSLLHPG--GILVV 207 (288)
T ss_pred cccccccCCcchhcccccEEEecchhhhhccccccEEEEEEeeeeEecccccHHHHHHHHHHHHhhCcC--cEEEE
Confidence 000 000000000001111111 111 2357999999877644 556788999999999876 44444
|
|
| >PF05971 Methyltransf_10: Protein of unknown function (DUF890); InterPro: IPR010286 This family consists of several conserved hypothetical proteins from both eukaryotes and prokaryotes | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00034 Score=65.93 Aligned_cols=88 Identities=18% Similarity=0.325 Sum_probs=50.1
Q ss_pred CCeEEEEcCccC-HHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTG-LAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtG-L~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
..++||+|+|.- +..|+.++. +-++++||+++..++.++.|++.|..+ ..+|.++.-.=... . +.
T Consensus 103 ~v~glDIGTGAscIYpLLg~~~~~W~fvaTdID~~sl~~A~~nv~~N~~L---~~~I~l~~~~~~~~---i-~~------ 169 (299)
T PF05971_consen 103 KVRGLDIGTGASCIYPLLGAKLYGWSFVATDIDPKSLESARENVERNPNL---ESRIELRKQKNPDN---I-FD------ 169 (299)
T ss_dssp --EEEEES-TTTTHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHHT-T----TTTEEEEE--ST-S---S-TT------
T ss_pred ceEeecCCccHHHHHHHHhhhhcCCeEEEecCCHHHHHHHHHHHHhcccc---ccceEEEEcCCccc---c-ch------
Confidence 678999999985 667777665 889999999999999999999999333 57788766531111 0 00
Q ss_pred ccccccCccchhccCCeeEEEEeccccCccc
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDL 229 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~ 229 (330)
.-+...+.||+.+|...+|....
T Consensus 170 --------~i~~~~e~~dftmCNPPFy~s~~ 192 (299)
T PF05971_consen 170 --------GIIQPNERFDFTMCNPPFYSSQE 192 (299)
T ss_dssp --------TSTT--S-EEEEEE-----SS--
T ss_pred --------hhhcccceeeEEecCCccccChh
Confidence 00112358999999999997543
|
The function of members of this family are unknown but are predicted to be SAM-dependent methyltransferases.; GO: 0008168 methyltransferase activity; PDB: 2H00_A. |
| >PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA [] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00056 Score=62.97 Aligned_cols=64 Identities=20% Similarity=0.189 Sum_probs=50.7
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
....|.+|||-|.|.|..++.+|+. | .+|+.-|..++..+.+++|++.++. ..++.+..-|..+
T Consensus 37 ~i~pG~~VlEaGtGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl----~~~v~~~~~Dv~~ 103 (247)
T PF08704_consen 37 DIRPGSRVLEAGTGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGL----DDNVTVHHRDVCE 103 (247)
T ss_dssp T--TT-EEEEE--TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTC----CTTEEEEES-GGC
T ss_pred CCCCCCEEEEecCCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCC----CCCceeEecceec
Confidence 6678999999999999999999986 3 5899999999999999999999875 4678888877653
|
; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A. |
| >COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00047 Score=60.60 Aligned_cols=112 Identities=17% Similarity=0.201 Sum_probs=76.4
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.+.|.++|||=||+|.+|+-++.+ +.+|++.|.+..++..+++|++.-+. ..++.+...|-....+.
T Consensus 41 ~i~g~~~LDlFAGSGaLGlEAlSRGA~~~~~vE~~~~a~~~l~~N~~~l~~----~~~~~~~~~da~~~L~~-------- 108 (187)
T COG0742 41 EIEGARVLDLFAGSGALGLEALSRGAARVVFVEKDRKAVKILKENLKALGL----EGEARVLRNDALRALKQ-------- 108 (187)
T ss_pred ccCCCEEEEecCCccHhHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCC----ccceEEEeecHHHHHHh--------
Confidence 489999999999999999999888 47999999999999999999987553 34555555442211000
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHH----HhccCCCCeEEEEEeeee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLK----RLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~----~lL~~~~~~~i~va~~~R 256 (330)
......||+|. .|.=|.....+.....+. .+|+ +++.+++-..+.
T Consensus 109 ------------~~~~~~FDlVf-lDPPy~~~l~~~~~~~~~~~~~~~L~--~~~~iv~E~~~~ 157 (187)
T COG0742 109 ------------LGTREPFDLVF-LDPPYAKGLLDKELALLLLEENGWLK--PGALIVVEHDKD 157 (187)
T ss_pred ------------cCCCCcccEEE-eCCCCccchhhHHHHHHHHHhcCCcC--CCcEEEEEeCCC
Confidence 00112599887 567777676655555444 4454 356777744433
|
|
| >PF05958 tRNA_U5-meth_tr: tRNA (Uracil-5-)-methyltransferase; InterPro: IPR010280 This family consists of (uracil-5-)-methyltransferases 2 | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00015 Score=70.30 Aligned_cols=71 Identities=18% Similarity=0.150 Sum_probs=53.4
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
...|.+++.... ..-++ +||||=||+|..|+.+|..+++|++++..+.+++.+++|+..|+. .++++...+
T Consensus 182 ~~~l~~~~~~~l---~~~~~-~vlDlycG~G~fsl~la~~~~~V~gvE~~~~av~~A~~Na~~N~i-----~n~~f~~~~ 252 (352)
T PF05958_consen 182 NEKLYEQALEWL---DLSKG-DVLDLYCGVGTFSLPLAKKAKKVIGVEIVEEAVEDARENAKLNGI-----DNVEFIRGD 252 (352)
T ss_dssp HHHHHHHHHHHC---TT-TT-EEEEES-TTTCCHHHHHCCSSEEEEEES-HHHHHHHHHHHHHTT-------SEEEEE--
T ss_pred HHHHHHHHHHHh---hcCCC-cEEEEeecCCHHHHHHHhhCCeEEEeeCCHHHHHHHHHHHHHcCC-----CcceEEEee
Confidence 445556655543 22233 899999999999999999999999999999999999999999994 678877654
|
1.1.35 from EC from bacteria, archaea and eukaryotes. A 5-methyluridine (m(5)U) residue at position 54 is a conserved feature of bacterial and eukaryotic tRNAs. The methylation of U54 is catalysed by the tRNA(m5U54)methyltransferase, which in Saccharomyces cerevisiae is encoded by the nonessential TRM2 gene. It is thought that tRNA modification enzymes might have a role in tRNA maturation not necessarily linked to their known catalytic activity []. This protein family also contains the 23SrRNA methyltransferases, first proposed to be RNA methyltransferases by homology to the TrmA family. The member from Escherichia coli has now been shown to act as the 23S RNA methyltransferase for the conserved U1939. The gene is now designated rumA and was previously designated ygcA [].; GO: 0008173 RNA methyltransferase activity, 0006396 RNA processing; PDB: 2VS1_A 2JJQ_A 2BH2_A 1UWV_A 3BT7_B. |
| >KOG2361 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0001 Score=66.79 Aligned_cols=109 Identities=17% Similarity=0.217 Sum_probs=74.0
Q ss_pred eEEEEcCccCHHHHHHHHh----CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 123 ISLELGAGTGLAGILLSRV----AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 123 ~VLELG~GtGL~gl~lA~~----~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
+|||+|||.|-+..-+.+- +-.|++.|.+|.+++..+.|...+. .++..-..|...+....
T Consensus 74 ~ilEvGCGvGNtvfPll~~~~n~~l~v~acDfsp~Ai~~vk~~~~~~e------~~~~afv~Dlt~~~~~~--------- 138 (264)
T KOG2361|consen 74 TILEVGCGVGNTVFPLLKTSPNNRLKVYACDFSPRAIELVKKSSGYDE------SRVEAFVWDLTSPSLKE--------- 138 (264)
T ss_pred hheeeccCCCcccchhhhcCCCCCeEEEEcCCChHHHHHHHhccccch------hhhcccceeccchhccC---------
Confidence 7999999999887766665 2589999999999999999998875 33333333333321000
Q ss_pred ccccccCccchhccCCeeEEEEeccc--cCcccHHHHHHHHHHhccCCCCeEEEEEeeeeCc
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVI--YSDDLTDALFHTLKRLMPLGSKKVLYLALEKRYN 258 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDvi--Y~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R~~ 258 (330)
....+.+|+|++-=|+ -.++-....++.+.++|+|| +.+++.---|+.
T Consensus 139 ----------~~~~~svD~it~IFvLSAi~pek~~~a~~nl~~llKPG--G~llfrDYg~~D 188 (264)
T KOG2361|consen 139 ----------PPEEGSVDIITLIFVLSAIHPEKMQSVIKNLRTLLKPG--GSLLFRDYGRYD 188 (264)
T ss_pred ----------CCCcCccceEEEEEEEeccChHHHHHHHHHHHHHhCCC--cEEEEeecccch
Confidence 0123578888865555 23677888999999999865 456664333443
|
|
| >PF09445 Methyltransf_15: RNA cap guanine-N2 methyltransferase; InterPro: IPR019012 RNA cap guanine-N2 methyltransferases such as Schizosaccharomyces pombe (Fission yeast) trimethylguanosine synthase (Tgs1) and Giardia lamblia (Giardia intestinalis) Tgs2, catalyse the methylation step(s) for the conversion of the 7-monomethylguanosine (m(7)G) caps of snRNAs and snoRNAs to a 2,2,7-trimethylguanosine (m(2,2,7)G) cap structure [, , ] | Back alignment and domain information |
|---|
Probab=97.63 E-value=7.4e-05 Score=64.38 Aligned_cols=60 Identities=15% Similarity=0.096 Sum_probs=50.8
Q ss_pred CeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 122 IISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
+.|+|+.||.|--.+.+|+.+.+|++.|+++..++.++.|++.-+. ..++.+...||.+.
T Consensus 1 ~~vlD~fcG~GGNtIqFA~~~~~Viaidid~~~~~~a~hNa~vYGv----~~~I~~i~gD~~~~ 60 (163)
T PF09445_consen 1 TTVLDAFCGVGGNTIQFARTFDRVIAIDIDPERLECAKHNAEVYGV----ADNIDFICGDFFEL 60 (163)
T ss_dssp SEEEETT-TTSHHHHHHHHTT-EEEEEES-HHHHHHHHHHHHHTT-----GGGEEEEES-HHHH
T ss_pred CEEEEeccCcCHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEeCCHHHH
Confidence 3699999999999999999999999999999999999999999874 47899999999875
|
Trimethylguanosine synthase is specific for guanine, and N7 methylation must precede N2 methylation. This enzyme is required for pre-mRNA splicing, pre-rRNA processing and small ribosomal subunit synthesis. As such, this enzyme plays a role in transcriptional regulation. ; GO: 0008168 methyltransferase activity, 0001510 RNA methylation, 0009452 RNA capping; PDB: 3EGI_B 3GDH_A. |
| >TIGR01444 fkbM_fam methyltransferase, FkbM family | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0002 Score=59.62 Aligned_cols=58 Identities=17% Similarity=0.174 Sum_probs=49.4
Q ss_pred eEEEEcCccCHHHHHHHHhCC--eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 123 ISLELGAGTGLAGILLSRVAW--TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 123 ~VLELG~GtGL~gl~lA~~~~--~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
+|||+|||+|..++.+++.+. +|++.|.++.+.+.+++|+..|+. .++.+....+.+.
T Consensus 1 ~vlDiGa~~G~~~~~~~~~~~~~~v~~~E~~~~~~~~l~~~~~~n~~-----~~v~~~~~al~~~ 60 (143)
T TIGR01444 1 VVIDVGANIGDTSLYFARKGAEGRVIAFEPLPDAYEILEENVKLNNL-----PNVVLLNAAVGDR 60 (143)
T ss_pred CEEEccCCccHHHHHHHHhCCCCEEEEEecCHHHHHHHHHHHHHcCC-----CcEEEEEeeeeCC
Confidence 489999999999999998854 799999999999999999999873 4577777776654
|
Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548. |
| >COG3963 Phospholipid N-methyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0007 Score=58.23 Aligned_cols=126 Identities=14% Similarity=0.141 Sum_probs=80.2
Q ss_pred cCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCC
Q 020158 94 VGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFS 170 (330)
Q Consensus 94 ~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~ 170 (330)
+| .+=++|-.||+-|.... ..-.|+.|||||.|||...-++.++| ..+++.+++++....+.+..
T Consensus 26 VG-aI~PsSs~lA~~M~s~I---~pesglpVlElGPGTGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~-------- 93 (194)
T COG3963 26 VG-AILPSSSILARKMASVI---DPESGLPVLELGPGTGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLY-------- 93 (194)
T ss_pred ee-eecCCcHHHHHHHHhcc---CcccCCeeEEEcCCccHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhC--------
Confidence 44 34467778888887663 44578899999999998887777775 58999999999887776543
Q ss_pred CCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeE
Q 020158 171 HQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKV 248 (330)
Q Consensus 171 ~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~ 248 (330)
..+.+.+.|-.+..... .......||.|+++=-+-+.. ..-++++.+...+..| ++.
T Consensus 94 --p~~~ii~gda~~l~~~l------------------~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~g-g~l 152 (194)
T COG3963 94 --PGVNIINGDAFDLRTTL------------------GEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAG-GPL 152 (194)
T ss_pred --CCccccccchhhHHHHH------------------hhcCCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCC-CeE
Confidence 22333333322210000 001345799999987776544 3345666666667654 444
Q ss_pred EEEE
Q 020158 249 LYLA 252 (330)
Q Consensus 249 i~va 252 (330)
+-+.
T Consensus 153 vqft 156 (194)
T COG3963 153 VQFT 156 (194)
T ss_pred EEEE
Confidence 4443
|
|
| >COG2520 Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0003 Score=67.48 Aligned_cols=95 Identities=19% Similarity=0.171 Sum_probs=71.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCe-EEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWT-VFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~-V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..|-+|||+=||.|-.+|.+|+.|+. |++.|+||..++.+++|+.+|+. ...+.....|-.+..+
T Consensus 187 ~~GE~V~DmFAGVGpfsi~~Ak~g~~~V~A~diNP~A~~~L~eNi~LN~v----~~~v~~i~gD~rev~~---------- 252 (341)
T COG2520 187 KEGETVLDMFAGVGPFSIPIAKKGRPKVYAIDINPDAVEYLKENIRLNKV----EGRVEPILGDAREVAP---------- 252 (341)
T ss_pred cCCCEEEEccCCcccchhhhhhcCCceEEEEecCHHHHHHHHHHHHhcCc----cceeeEEeccHHHhhh----------
Confidence 45899999999999999999999865 99999999999999999999996 3557777776444311
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
....+|-|+..-.- ....++.+...+++.+
T Consensus 253 -------------~~~~aDrIim~~p~----~a~~fl~~A~~~~k~~ 282 (341)
T COG2520 253 -------------ELGVADRIIMGLPK----SAHEFLPLALELLKDG 282 (341)
T ss_pred -------------ccccCCEEEeCCCC----cchhhHHHHHHHhhcC
Confidence 12578999876443 3445555555566554
|
|
| >PLN02823 spermine synthase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00053 Score=65.94 Aligned_cols=105 Identities=17% Similarity=0.252 Sum_probs=71.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+.++||.||+|.|.+...+.+. ..+|++.|+++.+++.+++++..+...+. ..++++..-|-.....
T Consensus 103 ~pk~VLiiGgG~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~-dprv~v~~~Da~~~L~---------- 171 (336)
T PLN02823 103 NPKTVFIMGGGEGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFC-DKRLELIINDARAELE---------- 171 (336)
T ss_pred CCCEEEEECCCchHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhccccccccc-CCceEEEEChhHHHHh----------
Confidence 4689999999999888877775 36899999999999999999876643222 3566666554222100
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc--------cHHHHHH-HHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD--------LTDALFH-TLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--------~~~~l~~-tl~~lL~~~~~~~i~v 251 (330)
...++||+|+. |+ .++. ....+++ .+++.|+++ +++++
T Consensus 172 ------------~~~~~yDvIi~-D~-~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~--Gvlv~ 218 (336)
T PLN02823 172 ------------KRDEKFDVIIG-DL-ADPVEGGPCYQLYTKSFYERIVKPKLNPG--GIFVT 218 (336)
T ss_pred ------------hCCCCccEEEe-cC-CCccccCcchhhccHHHHHHHHHHhcCCC--cEEEE
Confidence 02357999994 44 2321 2456777 889999765 44443
|
|
| >PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0038 Score=56.93 Aligned_cols=130 Identities=15% Similarity=0.170 Sum_probs=84.4
Q ss_pred cCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCC
Q 020158 94 VGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSH 171 (330)
Q Consensus 94 ~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~ 171 (330)
-|...++.++.=|.|+.++ ..+.|++||=|| =-=|+||++|.. .++|++.|+++.+++.+++.++..+
T Consensus 22 Q~~~T~eT~~~Ra~~~~~~----gdL~gk~il~lG-DDDLtSlA~al~~~~~~I~VvDiDeRll~fI~~~a~~~g----- 91 (243)
T PF01861_consen 22 QGYATPETTLRRAALMAER----GDLEGKRILFLG-DDDLTSLALALTGLPKRITVVDIDERLLDFINRVAEEEG----- 91 (243)
T ss_dssp ---B-HHHHHHHHHHHHHT----T-STT-EEEEES--TT-HHHHHHHHT--SEEEEE-S-HHHHHHHHHHHHHHT-----
T ss_pred cccccHHHHHHHHHHHHhc----CcccCCEEEEEc-CCcHHHHHHHhhCCCCeEEEEEcCHHHHHHHHHHHHHcC-----
Confidence 3667788888888898886 678999999998 334899988876 4799999999999999999999887
Q ss_pred CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 172 QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 172 ~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
-++++...|..++.|.. ..++||+++ .|.-|-.+-...|+.---..|+. .++..|+
T Consensus 92 -l~i~~~~~DlR~~LP~~---------------------~~~~fD~f~-TDPPyT~~G~~LFlsRgi~~Lk~-~g~~gy~ 147 (243)
T PF01861_consen 92 -LPIEAVHYDLRDPLPEE---------------------LRGKFDVFF-TDPPYTPEGLKLFLSRGIEALKG-EGCAGYF 147 (243)
T ss_dssp ---EEEE---TTS---TT---------------------TSS-BSEEE-E---SSHHHHHHHHHHHHHTB-S-TT-EEEE
T ss_pred -CceEEEEecccccCCHH---------------------HhcCCCEEE-eCCCCCHHHHHHHHHHHHHHhCC-CCceEEE
Confidence 34889999988875543 246899887 68888888888888777777764 3446777
Q ss_pred EeeeeC
Q 020158 252 ALEKRY 257 (330)
Q Consensus 252 a~~~R~ 257 (330)
++..+.
T Consensus 148 ~~~~~~ 153 (243)
T PF01861_consen 148 GFTHKE 153 (243)
T ss_dssp EE-TTT
T ss_pred EEecCc
Confidence 766553
|
All the members are 350-400 amino acids long.; PDB: 2QM3_A. |
| >PF09243 Rsm22: Mitochondrial small ribosomal subunit Rsm22; InterPro: IPR015324 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0013 Score=61.45 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=65.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
..|+.++|||+|||+|....++... -.++++.|.++.|++..+.=+. +... . ....|......
T Consensus 30 p~f~P~~vLD~GsGpGta~wAa~~~~~~~~~~~~vd~s~~~~~l~~~l~~-~~~~------~--~~~~~~~~~~~----- 95 (274)
T PF09243_consen 30 PDFRPRSVLDFGSGPGTALWAAREVWPSLKEYTCVDRSPEMLELAKRLLR-AGPN------N--RNAEWRRVLYR----- 95 (274)
T ss_pred cCCCCceEEEecCChHHHHHHHHHHhcCceeeeeecCCHHHHHHHHHHHh-cccc------c--ccchhhhhhhc-----
Confidence 4688999999999999765554443 3689999999999987776433 2211 0 11112211000
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+.......|+|+++-++-.... ....+.+.++-+...+.+++|-
T Consensus 96 --------------~~~~~~~~DLvi~s~~L~EL~~-~~r~~lv~~LW~~~~~~LVlVE 139 (274)
T PF09243_consen 96 --------------DFLPFPPDDLVIASYVLNELPS-AARAELVRSLWNKTAPVLVLVE 139 (274)
T ss_pred --------------ccccCCCCcEEEEehhhhcCCc-hHHHHHHHHHHHhccCcEEEEc
Confidence 0001234499999999988666 6666677776433333455553
|
The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Rsm22 has been identified as a mitochondrial small ribosomal subunit [] and is a methyltransferase. In Schizosaccharomyces pombe (Fission yeast), Rsm22 is tandemly fused to Cox11 (a factor required for copper insertion into cytochrome oxidase) and the two proteins are proteolytically cleaved after import into the mitochondria []. This entry consists of mitochondrial Rsm22 and homologous sequences from bacteria.; GO: 0008168 methyltransferase activity, 0006412 translation |
| >PF00398 RrnaAD: Ribosomal RNA adenine dimethylase; InterPro: IPR001737 This family of proteins include rRNA adenine dimethylases (e | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0039 Score=57.85 Aligned_cols=74 Identities=16% Similarity=0.170 Sum_probs=59.2
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
..-+++.|.... ..-++..|||+|+|+|..+..++..+++|++.+.++.+.+.++..... ..++.+...|
T Consensus 15 ~~~~~~~Iv~~~---~~~~~~~VlEiGpG~G~lT~~L~~~~~~v~~vE~d~~~~~~L~~~~~~-------~~~~~vi~~D 84 (262)
T PF00398_consen 15 DPNIADKIVDAL---DLSEGDTVLEIGPGPGALTRELLKRGKRVIAVEIDPDLAKHLKERFAS-------NPNVEVINGD 84 (262)
T ss_dssp HHHHHHHHHHHH---TCGTTSEEEEESSTTSCCHHHHHHHSSEEEEEESSHHHHHHHHHHCTT-------CSSEEEEES-
T ss_pred CHHHHHHHHHhc---CCCCCCEEEEeCCCCccchhhHhcccCcceeecCcHhHHHHHHHHhhh-------cccceeeecc
Confidence 445666666664 334789999999999999999999999999999999999999987652 4678888888
Q ss_pred CCCC
Q 020158 182 WMNP 185 (330)
Q Consensus 182 W~~~ 185 (330)
..+.
T Consensus 85 ~l~~ 88 (262)
T PF00398_consen 85 FLKW 88 (262)
T ss_dssp TTTS
T ss_pred hhcc
Confidence 6653
|
g. KsgA) and the Erythromycin resistance methylases (Erm). The bacterial enzyme KsgA catalyses the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases in 16S rRNA. This enzyme and the resulting modified adenosine bases appear to be conserved in all species of eubacteria, eukaryotes, and archaea, and in eukaryotic organelles. Bacterial resistance to the aminoglycoside antibiotic kasugamycin involves inactivation of KsgA and resulting loss of the dimethylations, with modest consequences to the overall fitness of the organism. In contrast, the yeast ortholog, Dim1, is essential. In Saccharomyces cerevisiae (Baker's yeast), and presumably in other eukaryotes, the enzyme performs a vital role in pre-rRNA processing in addition to its methylating activity. The best conserved region in these enzymes is located in the N-terminal section and corresponds to a region that is probably involved in S-adenosyl methionine (SAM) binding domain. The crystal structure of KsgA from Escherichia coli has been solved to a resolution of 2.1A. It bears a strong similarity to the crystal structure of ErmC' from Bacillus stearothermophilus and a lesser similarity to the yeast mitochondrial transcription factor, sc-mtTFB []. The Erm family of RNA methyltransferases, which methylate a single adenosine base in 23S rRNA confer resistance to the MLS-B group of antibiotics. Despite their sequence similarity, the two enzyme families have strikingly different levels of regulation that remain to be elucidated. Other orthologs, of this family include the yeast and Homo sapiens (Human) mitochondrial transcription factors (MTF1 and h-mtTFB respectively), which are nuclear encoded []. Human-mtTFB is able to stimulate transcription in vitro independently of its S-adenosylmethionine binding and rRNA methyltransferase activity [].; GO: 0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity, 0008649 rRNA methyltransferase activity, 0000154 rRNA modification; PDB: 3FTF_A 3R9X_B 3FTE_A 3FTC_A 3FTD_A 3GRY_A 3FYC_A 3GRU_A 3FYD_A 3GRV_A .... |
| >PF02527 GidB: rRNA small subunit methyltransferase G; InterPro: IPR003682 This entry represents a rRNA small subunit methyltransferase G | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0018 Score=57.07 Aligned_cols=89 Identities=22% Similarity=0.236 Sum_probs=62.7
Q ss_pred eEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcccc
Q 020158 123 ISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQE 200 (330)
Q Consensus 123 ~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~ 200 (330)
+++|+|+|.|++||.+|-. ..+|++.|-...=...++.-+..-+ ..++++.....++.
T Consensus 51 ~~lDiGSGaGfPGipLaI~~p~~~~~LvEs~~KK~~FL~~~~~~L~-----L~nv~v~~~R~E~~--------------- 110 (184)
T PF02527_consen 51 KVLDIGSGAGFPGIPLAIARPDLQVTLVESVGKKVAFLKEVVRELG-----LSNVEVINGRAEEP--------------- 110 (184)
T ss_dssp EEEEETSTTTTTHHHHHHH-TTSEEEEEESSHHHHHHHHHHHHHHT------SSEEEEES-HHHT---------------
T ss_pred eEEecCCCCCChhHHHHHhCCCCcEEEEeCCchHHHHHHHHHHHhC-----CCCEEEEEeeeccc---------------
Confidence 7999999999999999987 4689999999755555544443333 24577776665441
Q ss_pred ccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 201 RYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 201 ~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
.....||+|++--+- ..+.++..+..+++++
T Consensus 111 ---------~~~~~fd~v~aRAv~----~l~~l~~~~~~~l~~~ 141 (184)
T PF02527_consen 111 ---------EYRESFDVVTARAVA----PLDKLLELARPLLKPG 141 (184)
T ss_dssp ---------TTTT-EEEEEEESSS----SHHHHHHHHGGGEEEE
T ss_pred ---------ccCCCccEEEeehhc----CHHHHHHHHHHhcCCC
Confidence 123589999987543 6678888888888664
|
Previously identified as a glucose-inhibited division protein B that appears to be present and in a single copy in all complete eubacterial genomes so far sequenced. Specifically methylates the N7 position of a guanosine in 16S rRNA [, , ].; GO: 0008649 rRNA methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1XDZ_A 3G88_A 3G8A_B 3G89_B 3G8B_B 1JSX_A. |
| >PF01739 CheR: CheR methyltransferase, SAM binding domain; InterPro: IPR022642 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00065 Score=60.45 Aligned_cols=109 Identities=17% Similarity=0.245 Sum_probs=63.2
Q ss_pred CCCeEEEEcCccC--HHHHHHHHh------C---CeEEEEeCchHHHHHHHHHH-HHccCC-CC----------------
Q 020158 120 NGIISLELGAGTG--LAGILLSRV------A---WTVFLTDHGNYILDNCAKNV-QLNSGV-FS---------------- 170 (330)
Q Consensus 120 ~g~~VLELG~GtG--L~gl~lA~~------~---~~V~~TD~~~~~L~~~~~Nv-~~N~~~-~~---------------- 170 (330)
+..+|+-.||+|| ..||++... . .+|++||+++.+|+.+++=+ ..+... +.
T Consensus 31 ~~lrIWSagCStGeE~YSlAmll~e~~~~~~~~~~~I~atDi~~~~L~~Ar~G~Y~~~~~~~~~~~~~~ryf~~~~~~~~ 110 (196)
T PF01739_consen 31 RPLRIWSAGCSTGEEPYSLAMLLLELLPGALGWDFRILATDISPSALEKARAGIYPERSLRGLPPAYLRRYFTERDGGGY 110 (196)
T ss_dssp S-EEEEETT-TTTHHHHHHHHHHHHHH-S-TT-SEEEEEEES-HHHHHHHHHTEEEGGGGTTS-HHHHHHHEEEE-CCCT
T ss_pred CCeEEEECCCCCChhHHHHHHHHHHHhcccCCCceEEEEEECCHHHHHHHHhCCCCHHHHhhhHHHHHHHhccccCCCce
Confidence 4569999999999 444444332 1 38999999999999886421 000000 00
Q ss_pred -----CCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC--cccHHHHHHHHHHhccC
Q 020158 171 -----HQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS--DDLTDALFHTLKRLMPL 243 (330)
Q Consensus 171 -----~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL~~ 243 (330)
-...|.+..++-.+.. .....||+|+|-+|+.+ .+....+++.+...|++
T Consensus 111 ~v~~~lr~~V~F~~~NL~~~~-----------------------~~~~~fD~I~CRNVlIYF~~~~~~~vl~~l~~~L~p 167 (196)
T PF01739_consen 111 RVKPELRKMVRFRRHNLLDPD-----------------------PPFGRFDLIFCRNVLIYFDPETQQRVLRRLHRSLKP 167 (196)
T ss_dssp TE-HHHHTTEEEEE--TT-S-----------------------------EEEEEE-SSGGGS-HHHHHHHHHHHGGGEEE
T ss_pred eEChHHcCceEEEecccCCCC-----------------------cccCCccEEEecCEEEEeCHHHHHHHHHHHHHHcCC
Confidence 0234666666655511 12468999999999844 55678899999999976
Q ss_pred CCCeEEEEEe
Q 020158 244 GSKKVLYLAL 253 (330)
Q Consensus 244 ~~~~~i~va~ 253 (330)
+ +.+++..
T Consensus 168 g--G~L~lG~ 175 (196)
T PF01739_consen 168 G--GYLFLGH 175 (196)
T ss_dssp E--EEEEE-T
T ss_pred C--CEEEEec
Confidence 4 6777753
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Flagellated bacteria swim towards favourable chemicals and away from deleterious ones. Sensing of chemoeffector gradients involves chemotaxis receptors, transmembrane (TM) proteins that detect stimuli through their periplasmic domains and transduce the signals via their cytoplasmic domains []. Signalling outputs from these receptors are influenced both by the binding of the chemoeffector ligand to their periplasmic domains and by methylation of specific glutamate residues on their cytoplasmic domains. Methylation is catalysed by CheR, an S-adenosylmethionine-dependent methyltransferase [], which reversibly methylates specific glutamate residues within a coiled coil region, to form gamma-glutamyl methyl ester residues [, ]. The structure of the Salmonella typhimurium chemotaxis receptor methyltransferase CheR, bound to S-adenosylhomocysteine, has been determined to a resolution of 2.0 A []. The structure reveals CheR to be a two-domain protein, with a smaller N-terminal helical domain linked via a single polypeptide connection to a larger C-terminal alpha/beta domain. The C-terminal domain has the characteristics of a nucleotide-binding fold, with an insertion of a small anti-parallel beta-sheet subdomain. The S-adenosylhomocysteine-binding site is formed mainly by the large domain, with contributions from residues within the N-terminal domain and the linker region []. CheR proteins are part of the chemotaxis signaling mechanism which methylates the chemotaxis receptor at specific glutamate residues. This entry refers to the C-terminal SAM-binding domain of the CherR-type MCP methyltransferases, which are found in bacteria, archaea and green plants. This entry is found in association with PF03705 from PFAM. ; PDB: 1AF7_A 1BC5_A. |
| >KOG0820 consensus Ribosomal RNA adenine dimethylase [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0021 Score=59.42 Aligned_cols=65 Identities=20% Similarity=0.217 Sum_probs=54.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
..-.+..|||+|-|||.....+...|++|++.+.++.|++.+++.++--.. .+..++...|...-
T Consensus 55 ~~k~tD~VLEvGPGTGnLT~~lLe~~kkVvA~E~Dprmvael~krv~gtp~----~~kLqV~~gD~lK~ 119 (315)
T KOG0820|consen 55 DLKPTDVVLEVGPGTGNLTVKLLEAGKKVVAVEIDPRMVAELEKRVQGTPK----SGKLQVLHGDFLKT 119 (315)
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCeEEEEecCcHHHHHHHHHhcCCCc----cceeeEEecccccC
Confidence 445678999999999999999999999999999999999999988854321 46788888887764
|
|
| >PRK00536 speE spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0022 Score=59.53 Aligned_cols=93 Identities=11% Similarity=-0.049 Sum_probs=67.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
+.++||=+|.|-|.+.--+.++..+|++.|+++++++.+++-+-.....+. ..++++.. |...
T Consensus 72 ~pk~VLIiGGGDGg~~REvLkh~~~v~mVeID~~Vv~~~k~~lP~~~~~~~-DpRv~l~~--~~~~-------------- 134 (262)
T PRK00536 72 ELKEVLIVDGFDLELAHQLFKYDTHVDFVQADEKILDSFISFFPHFHEVKN-NKNFTHAK--QLLD-------------- 134 (262)
T ss_pred CCCeEEEEcCCchHHHHHHHCcCCeeEEEECCHHHHHHHHHHCHHHHHhhc-CCCEEEee--hhhh--------------
Confidence 468999999999999999998877999999999999999983322211122 35565554 2211
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
...++||+|| .|..|. ..+.+.+++.|+++
T Consensus 135 ----------~~~~~fDVII-vDs~~~----~~fy~~~~~~L~~~ 164 (262)
T PRK00536 135 ----------LDIKKYDLII-CLQEPD----IHKIDGLKRMLKED 164 (262)
T ss_pred ----------ccCCcCCEEE-EcCCCC----hHHHHHHHHhcCCC
Confidence 0125799999 677654 57778899999775
|
|
| >PF01170 UPF0020: Putative RNA methylase family UPF0020; InterPro: IPR000241 This domain is probably a methylase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0022 Score=56.18 Aligned_cols=99 Identities=11% Similarity=0.047 Sum_probs=65.9
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCe-----------EEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWT-----------VFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPW 186 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~-----------V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~ 186 (330)
.-+|..|||-=||+|-.-|-+|..+.. +++.|+++.++..++.|+...+. ...+.+...|..+..
T Consensus 26 ~~~~~~vlDP~CGsGtiliEaa~~~~~~~~~~~~~~~~~~g~Di~~~~v~~a~~N~~~ag~----~~~i~~~~~D~~~l~ 101 (179)
T PF01170_consen 26 WRPGDVVLDPFCGSGTILIEAALMGANIPPLNDINELKIIGSDIDPKAVRGARENLKAAGV----EDYIDFIQWDARELP 101 (179)
T ss_dssp --TTS-EEETT-TTSHHHHHHHHHHTTTSTTTH-CH--EEEEESSHHHHHHHHHHHHHTT-----CGGEEEEE--GGGGG
T ss_pred CCCCCEEeecCCCCCHHHHHHHHHhhCcccccccccccEEecCCCHHHHHHHHHHHHhccc----CCceEEEecchhhcc
Confidence 345789999999999999988887533 67999999999999999987664 356777776655431
Q ss_pred CCCccCCCCCccccccccCccchhccCCeeEEEEeccccC--------cccHHHHHHHHHHhccC
Q 020158 187 PPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS--------DDLTDALFHTLKRLMPL 243 (330)
Q Consensus 187 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~--------~~~~~~l~~tl~~lL~~ 243 (330)
...+.+|+||+.-..-. ..++..+++.+.+.+++
T Consensus 102 -----------------------~~~~~~d~IvtnPPyG~r~~~~~~~~~ly~~~~~~~~~~l~~ 143 (179)
T PF01170_consen 102 -----------------------LPDGSVDAIVTNPPYGRRLGSKKDLEKLYRQFLRELKRVLKP 143 (179)
T ss_dssp -----------------------GTTSBSCEEEEE--STTSHCHHHHHHHHHHHHHHHHHCHSTT
T ss_pred -----------------------cccCCCCEEEECcchhhhccCHHHHHHHHHHHHHHHHHHCCC
Confidence 02247898887544332 23556667777777754
|
It is associated with the THUMP domain that also occurs with RNA modification domains [].; PDB: 3LDU_A 3LDG_A 3K0B_A 3V8V_B 3V97_A 3TLJ_A 3TM5_B 3TM4_A 3TMA_A. |
| >COG0030 KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0025 Score=58.91 Aligned_cols=70 Identities=16% Similarity=0.061 Sum_probs=56.1
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.+.+.... ...++.+|||+|+|.|.+...+++.+++|++.++++.+++.+++.... ..++.+...|....
T Consensus 19 ~~kIv~~a---~~~~~d~VlEIGpG~GaLT~~Ll~~~~~v~aiEiD~~l~~~L~~~~~~-------~~n~~vi~~DaLk~ 88 (259)
T COG0030 19 IDKIVEAA---NISPGDNVLEIGPGLGALTEPLLERAARVTAIEIDRRLAEVLKERFAP-------YDNLTVINGDALKF 88 (259)
T ss_pred HHHHHHhc---CCCCCCeEEEECCCCCHHHHHHHhhcCeEEEEEeCHHHHHHHHHhccc-------ccceEEEeCchhcC
Confidence 55666553 334578999999999999999999999999999999999999887752 46777777775553
|
|
| >PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0054 Score=64.74 Aligned_cols=75 Identities=15% Similarity=0.077 Sum_probs=58.0
Q ss_pred HHHHHHhhhcCCCCC-CCCCeEEEEcCccCHHHHHHHHhC----------------------------------------
Q 020158 104 VLADFVMHKMCTSSD-FNGIISLELGAGTGLAGILLSRVA---------------------------------------- 142 (330)
Q Consensus 104 ~La~~l~~~~~~~~~-~~g~~VLELG~GtGL~gl~lA~~~---------------------------------------- 142 (330)
.||.-|+... .. -.+..++|-+||+|-..|-+|..+
T Consensus 176 tlAaa~l~~a---~w~~~~~~l~DP~CGSGTilIEAa~~~~~~~pg~~r~~f~f~~~~~~~~~~w~~~~~~a~~~~~~~~ 252 (702)
T PRK11783 176 NLAAAILLRS---GWPQEGTPLLDPMCGSGTLLIEAAMMAADIAPGLHRERWGFSGWLGHDEALWQELLEEAQERARAGL 252 (702)
T ss_pred HHHHHHHHHc---CCCCCCCeEEccCCCccHHHHHHHHHHhcCCCCccccccccccCCCCCHHHHHHHHHHHHHHHhhcc
Confidence 5666555542 22 257899999999999988887631
Q ss_pred ----CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 143 ----WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 143 ----~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.+++++|+++.+++.++.|+..++. ...+.+...|+.+.
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~~g~----~~~i~~~~~D~~~~ 295 (702)
T PRK11783 253 AELPSKFYGSDIDPRVIQAARKNARRAGV----AELITFEVKDVADL 295 (702)
T ss_pred cccCceEEEEECCHHHHHHHHHHHHHcCC----CcceEEEeCChhhc
Confidence 2699999999999999999999875 35688888887764
|
|
| >COG0357 GidB Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0027 Score=57.17 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=64.3
Q ss_pred CCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
+++++|+|+|.|++|+.+|-. ..+|+..|-...=...++.=...-+ ..++++....-++..+
T Consensus 68 ~~~~~DIGSGaGfPGipLAI~~p~~~vtLles~~Kk~~FL~~~~~eL~-----L~nv~i~~~RaE~~~~----------- 131 (215)
T COG0357 68 AKRVLDIGSGAGFPGIPLAIAFPDLKVTLLESLGKKIAFLREVKKELG-----LENVEIVHGRAEEFGQ----------- 131 (215)
T ss_pred CCEEEEeCCCCCCchhhHHHhccCCcEEEEccCchHHHHHHHHHHHhC-----CCCeEEehhhHhhccc-----------
Confidence 689999999999999999955 4569999988654444443332222 2445555444333211
Q ss_pred ccccccCccchhccCC-eeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 199 QERYSWNSSELKEVQR-ASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~-~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..+ ||+|.+--+ .....++..+..+++.++..++|.
T Consensus 132 -------------~~~~~D~vtsRAv----a~L~~l~e~~~pllk~~g~~~~~k 168 (215)
T COG0357 132 -------------EKKQYDVVTSRAV----ASLNVLLELCLPLLKVGGGFLAYK 168 (215)
T ss_pred -------------ccccCcEEEeehc----cchHHHHHHHHHhcccCCcchhhh
Confidence 113 999997543 367788888888998765544443
|
|
| >PRK10611 chemotaxis methyltransferase CheR; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0015 Score=61.45 Aligned_cols=109 Identities=14% Similarity=0.220 Sum_probs=69.4
Q ss_pred CCeEEEEcCccC--HHHHHHH--Hh------CCeEEEEeCchHHHHHHHHHHHH-----ccC------------------
Q 020158 121 GIISLELGAGTG--LAGILLS--RV------AWTVFLTDHGNYILDNCAKNVQL-----NSG------------------ 167 (330)
Q Consensus 121 g~~VLELG~GtG--L~gl~lA--~~------~~~V~~TD~~~~~L~~~~~Nv~~-----N~~------------------ 167 (330)
..+|+-.||.|| ..+|++. .. ..+|++||+++.+|+.++.-+=. +-.
T Consensus 116 ~irIWSAgCStGEEpYSlAmll~e~~~~~~~~~~I~atDIs~~aL~~Ar~G~Y~~~~~r~~p~~~~~ryF~~~~~~~~~~ 195 (287)
T PRK10611 116 EYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRQEELKTLSPQQLQRYFMRGTGPHEGL 195 (287)
T ss_pred CEEEEEccccCCHHHHHHHHHHHHhhcccCCCcEEEEEECCHHHHHHHHhCCCCHHHHhcCCHHHHHHHcccccCCCCce
Confidence 369999999999 4555443 32 14799999999999999754310 000
Q ss_pred -CCCC--CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC--cccHHHHHHHHHHhcc
Q 020158 168 -VFSH--QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS--DDLTDALFHTLKRLMP 242 (330)
Q Consensus 168 -~~~~--~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL~ 242 (330)
.+.. ...|.+..++-.+.. ......||+|+|-+|+.+ +.....+++.+.+.|+
T Consensus 196 ~~v~~~lr~~V~F~~~NL~~~~----------------------~~~~~~fD~I~cRNvliyF~~~~~~~vl~~l~~~L~ 253 (287)
T PRK10611 196 VRVRQELANYVDFQQLNLLAKQ----------------------WAVPGPFDAIFCRNVMIYFDKTTQERILRRFVPLLK 253 (287)
T ss_pred EEEChHHHccCEEEcccCCCCC----------------------CccCCCcceeeHhhHHhcCCHHHHHHHHHHHHHHhC
Confidence 0000 123344444433210 011358999999888854 4678899999999998
Q ss_pred CCCCeEEEEEe
Q 020158 243 LGSKKVLYLAL 253 (330)
Q Consensus 243 ~~~~~~i~va~ 253 (330)
+| +.+++..
T Consensus 254 pg--G~L~lG~ 262 (287)
T PRK10611 254 PD--GLLFAGH 262 (287)
T ss_pred CC--cEEEEeC
Confidence 76 4666643
|
|
| >COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0054 Score=57.14 Aligned_cols=124 Identities=14% Similarity=0.198 Sum_probs=77.9
Q ss_pred HHHHHHhhhcCC-CCCCCCCeEEEEcCccC--HHHHHHHHh--C-------CeEEEEeCchHHHHHHHH------HHHHc
Q 020158 104 VLADFVMHKMCT-SSDFNGIISLELGAGTG--LAGILLSRV--A-------WTVFLTDHGNYILDNCAK------NVQLN 165 (330)
Q Consensus 104 ~La~~l~~~~~~-~~~~~g~~VLELG~GtG--L~gl~lA~~--~-------~~V~~TD~~~~~L~~~~~------Nv~~N 165 (330)
.|.+.+...... ... +..+|...||+|| -.||+++.. . .+|++||++..+|+.++. +...|
T Consensus 80 ~l~~~v~p~l~~~~~~-~~irIWSaaCStGEEpYSiAm~l~e~~~~~~~~~~~I~AtDId~~~L~~A~~G~Y~~~~~~~~ 158 (268)
T COG1352 80 ELRDEVLPELVKRKKG-RPIRIWSAACSTGEEPYSLAMLLLEALGKLAGFRVKILATDIDLSVLEKARAGIYPSRELLRG 158 (268)
T ss_pred HHHHHHHHHHHhhccC-CceEEEecCcCCCccHHHHHHHHHHHhccccCCceEEEEEECCHHHHHHHhcCCCChhHhhcc
Confidence 566666643210 011 4679999999999 555554433 2 489999999999999863 33222
Q ss_pred cCCC------C--C----------CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC-
Q 020158 166 SGVF------S--H----------QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS- 226 (330)
Q Consensus 166 ~~~~------~--~----------~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~- 226 (330)
-... . . ...|.+..++-..+.+ ..+.||+|+|-+|+-+
T Consensus 159 ~~~~~~~ryF~~~~~~~y~v~~~ir~~V~F~~~NLl~~~~-----------------------~~~~fD~IfCRNVLIYF 215 (268)
T COG1352 159 LPPELLRRYFERGGDGSYRVKEELRKMVRFRRHNLLDDSP-----------------------FLGKFDLIFCRNVLIYF 215 (268)
T ss_pred CCHHHHhhhEeecCCCcEEEChHHhcccEEeecCCCCCcc-----------------------ccCCCCEEEEcceEEee
Confidence 2100 0 0 2234555555444321 2357999999998833
Q ss_pred -cccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 227 -DDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 227 -~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
...-..++..+...|++| +.+++..
T Consensus 216 d~~~q~~il~~f~~~L~~g--G~LflG~ 241 (268)
T COG1352 216 DEETQERILRRFADSLKPG--GLLFLGH 241 (268)
T ss_pred CHHHHHHHHHHHHHHhCCC--CEEEEcc
Confidence 457778999999999765 6777754
|
|
| >PF02390 Methyltransf_4: Putative methyltransferase ; InterPro: IPR003358 This entry represents tRNA (guanine-N-7) methyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0094 Score=52.92 Aligned_cols=104 Identities=15% Similarity=0.124 Sum_probs=69.8
Q ss_pred eEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcccc
Q 020158 123 ISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQE 200 (330)
Q Consensus 123 ~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~ 200 (330)
.+||||||.|-.-+.+|.. ...+++.|+....+..+.+.+...+ ..++.+...|.......
T Consensus 20 l~lEIG~G~G~~l~~~A~~~Pd~n~iGiE~~~~~v~~a~~~~~~~~-----l~Nv~~~~~da~~~l~~------------ 82 (195)
T PF02390_consen 20 LILEIGCGKGEFLIELAKRNPDINFIGIEIRKKRVAKALRKAEKRG-----LKNVRFLRGDARELLRR------------ 82 (195)
T ss_dssp EEEEET-TTSHHHHHHHHHSTTSEEEEEES-HHHHHHHHHHHHHHT-----TSSEEEEES-CTTHHHH------------
T ss_pred eEEEecCCCCHHHHHHHHHCCCCCEEEEecchHHHHHHHHHHHhhc-----ccceEEEEccHHHHHhh------------
Confidence 8999999999888888876 5799999999999988888888876 47888888775542110
Q ss_pred ccccCccchhccCCeeEEE--EeccccCc------ccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 201 RYSWNSSELKEVQRASVLL--AADVIYSD------DLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 201 ~~~w~~~~~~~~~~~DlIl--aaDviY~~------~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
.-..+.+|-|. -.|.-.-. -..+.+++.+.++|++| +.+++..
T Consensus 83 --------~~~~~~v~~i~i~FPDPWpK~rH~krRl~~~~fl~~~~~~L~~g--G~l~~~T 133 (195)
T PF02390_consen 83 --------LFPPGSVDRIYINFPDPWPKKRHHKRRLVNPEFLELLARVLKPG--GELYFAT 133 (195)
T ss_dssp --------HSTTTSEEEEEEES-----SGGGGGGSTTSHHHHHHHHHHEEEE--EEEEEEE
T ss_pred --------cccCCchheEEEeCCCCCcccchhhhhcCCchHHHHHHHHcCCC--CEEEEEe
Confidence 11124566554 22221111 15789999999999775 5677754
|
1.1.33 from EC), which catalyses the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. Capping of the pre-mRNA 5' end by addition a monomethylated guanosine cap (m(7)G) is an essential and the earliest modification in the biogenesis of mRNA []. The reaction is catalysed by three enzymes: triphosphatase, guanylyltransferase, and tRNA (guanine-N-7) methyltransferase [, ].; GO: 0008176 tRNA (guanine-N7-)-methyltransferase activity, 0006400 tRNA modification; PDB: 3DXZ_A 3DXY_A 3DXX_A 3CKK_A 3P2I_B 3P2K_D 3P2E_A 3MTE_B 3PB3_B 1YZH_B .... |
| >PF05891 Methyltransf_PK: AdoMet dependent proline di-methyltransferase; InterPro: IPR008576 This family consists of several eukaryotic proteins of unknown function that are S-adenosyl-L-methionine-dependent methyltransferase-like | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.009 Score=53.71 Aligned_cols=130 Identities=17% Similarity=0.137 Sum_probs=77.1
Q ss_pred CCCeEEEEcCccCHHHH-HHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 120 NGIISLELGAGTGLAGI-LLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl-~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.-.++||.|||.|-++- ++.....+|-++|..+..++.++..+..+. .....+...-..+.
T Consensus 55 ~~~~alDcGAGIGRVTk~lLl~~f~~VDlVEp~~~Fl~~a~~~l~~~~-----~~v~~~~~~gLQ~f------------- 116 (218)
T PF05891_consen 55 KFNRALDCGAGIGRVTKGLLLPVFDEVDLVEPVEKFLEQAKEYLGKDN-----PRVGEFYCVGLQDF------------- 116 (218)
T ss_dssp --SEEEEET-TTTHHHHHTCCCC-SEEEEEES-HHHHHHHHHHTCCGG-----CCEEEEEES-GGG--------------
T ss_pred CcceEEecccccchhHHHHHHHhcCEeEEeccCHHHHHHHHHHhcccC-----CCcceEEecCHhhc-------------
Confidence 45799999999997774 556678899999999999999987654422 12222222221111
Q ss_pred ccccccCccchhccCCeeEEEEeccccC--cccHHHHHHHHHHhccCCCCeEEEEE-eeeeCcc-cccchh-hhccccch
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYS--DDLTDALFHTLKRLMPLGSKKVLYLA-LEKRYNF-SLNDLD-VVANGYSH 273 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL~~~~~~~i~va-~~~R~~f-~~~~~d-~v~~~y~~ 273 (330)
. +...+||+|.+-=|+=+ ++.+-.|++-++..|+++ ++|++= .--+..+ ..+..| .|.....+
T Consensus 117 ------~----P~~~~YDlIW~QW~lghLTD~dlv~fL~RCk~~L~~~--G~IvvKEN~~~~~~~~~D~~DsSvTRs~~~ 184 (218)
T PF05891_consen 117 ------T----PEEGKYDLIWIQWCLGHLTDEDLVAFLKRCKQALKPN--GVIVVKENVSSSGFDEFDEEDSSVTRSDEH 184 (218)
T ss_dssp -------------TT-EEEEEEES-GGGS-HHHHHHHHHHHHHHEEEE--EEEEEEEEEESSSEEEEETTTTEEEEEHHH
T ss_pred ------c----CCCCcEeEEEehHhhccCCHHHHHHHHHHHHHhCcCC--cEEEEEecCCCCCCcccCCccCeeecCHHH
Confidence 1 12358999998777655 456677888888888764 555552 1111222 222222 26677888
Q ss_pred hhhhhh
Q 020158 274 FRSYIM 279 (330)
Q Consensus 274 f~~~l~ 279 (330)
|+..+.
T Consensus 185 ~~~lF~ 190 (218)
T PF05891_consen 185 FRELFK 190 (218)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888886
|
; GO: 0008168 methyltransferase activity; PDB: 1XTP_A 2EX4_B. |
| >PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0065 Score=58.39 Aligned_cols=133 Identities=9% Similarity=0.095 Sum_probs=75.0
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccC-HHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCC-CC--
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTG-LAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSH-QG-- 173 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtG-L~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~-~~-- 173 (330)
=|=-+.+...|+-... ...++.+|||||||-| =+.-.....-..++++|++...|+.++............ ..
T Consensus 43 NwvKs~LI~~~~~~~~---~~~~~~~VLDl~CGkGGDL~Kw~~~~i~~~vg~Dis~~si~ea~~Ry~~~~~~~~~~~~~~ 119 (331)
T PF03291_consen 43 NWVKSVLIQKYAKKVK---QNRPGLTVLDLCCGKGGDLQKWQKAKIKHYVGIDISEESIEEARERYKQLKKRNNSKQYRF 119 (331)
T ss_dssp HHHHHHHHHHHCHCCC---CTTTT-EEEEET-TTTTTHHHHHHTT-SEEEEEES-HHHHHHHHHHHHHHHTSTT-HTSEE
T ss_pred HHHHHHHHHHHHHhhh---ccCCCCeEEEecCCCchhHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhccccccccccc
Confidence 3667888888764321 2227889999999976 444444444579999999999999998877321111000 11
Q ss_pred --eeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC----cccHHHHHHHHHHhccCCCCe
Q 020158 174 --SVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS----DDLTDALFHTLKRLMPLGSKK 247 (330)
Q Consensus 174 --~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~----~~~~~~l~~tl~~lL~~~~~~ 247 (330)
...+...|-... .....+ .....+||+|=+--.+++ ......+++.+..+|++| +
T Consensus 120 ~f~a~f~~~D~f~~-----------~l~~~~------~~~~~~FDvVScQFalHY~Fese~~ar~~l~Nvs~~Lk~G--G 180 (331)
T PF03291_consen 120 DFIAEFIAADCFSE-----------SLREKL------PPRSRKFDVVSCQFALHYAFESEEKARQFLKNVSSLLKPG--G 180 (331)
T ss_dssp CCEEEEEESTTCCS-----------HHHCTS------SSTTS-EEEEEEES-GGGGGSSHHHHHHHHHHHHHTEEEE--E
T ss_pred cchhheeccccccc-----------hhhhhc------cccCCCcceeehHHHHHHhcCCHHHHHHHHHHHHHhcCCC--C
Confidence 122222221110 000000 011258999999888876 446677899999999775 4
Q ss_pred EEEEE
Q 020158 248 VLYLA 252 (330)
Q Consensus 248 ~i~va 252 (330)
.++..
T Consensus 181 ~FIgT 185 (331)
T PF03291_consen 181 YFIGT 185 (331)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
|
The enzyme catalyses the first two reactions in the mRNA cap formation pathway. It is a heterodimer consisting of a large and small subunit. This entry is the large subunit. ; GO: 0006370 mRNA capping; PDB: 3EPP_A 3BGV_C 2VDW_C 1RI5_A 1RI3_A 1RI1_A 1Z3C_A 1RI2_A 2HV9_A 1RI4_A. |
| >PF08123 DOT1: Histone methylation protein DOT1 ; InterPro: IPR013110 The DOT1 domain regulates gene expression by methylating histone H3 [] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0052 Score=55.05 Aligned_cols=100 Identities=16% Similarity=0.112 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccC---CC-CCCCeeEEEEecCCCCCCCCcc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSG---VF-SHQGSVHVRDLNWMNPWPPIFS 191 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~---~~-~~~~~v~v~~ldW~~~~~~~~~ 191 (330)
.-++...+|||||.|-+-+.+|.. ..++++.++.+...+.++.+...... .. .....+.+...|+.+..
T Consensus 40 l~~~dvF~DlGSG~G~~v~~aal~~~~~~~~GIEi~~~~~~~a~~~~~~~~~~~~~~g~~~~~v~l~~gdfl~~~----- 114 (205)
T PF08123_consen 40 LTPDDVFYDLGSGVGNVVFQAALQTGCKKSVGIEILPELHDLAEELLEELKKRMKHYGKRPGKVELIHGDFLDPD----- 114 (205)
T ss_dssp --TT-EEEEES-TTSHHHHHHHHHH--SEEEEEE-SHHHHHHHHHHHHHHHHHHHHCTB---EEEEECS-TTTHH-----
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHcCCcEEEEEEechHHHHHHHHHHHHHHHHHHHhhcccccceeeccCccccH-----
Confidence 345779999999999777766655 46799999998766665544432210 00 01345666666654420
Q ss_pred CCCCCccccccccCccchh-ccCCeeEEEEeccccCcccHHHHHHHHH
Q 020158 192 LGNSSASQERYSWNSSELK-EVQRASVLLAADVIYSDDLTDALFHTLK 238 (330)
Q Consensus 192 ~~~~~~~~~~~~w~~~~~~-~~~~~DlIlaaDviY~~~~~~~l~~tl~ 238 (330)
... .....|+|+++..+|++++...|.+.+.
T Consensus 115 ----------------~~~~~~s~AdvVf~Nn~~F~~~l~~~L~~~~~ 146 (205)
T PF08123_consen 115 ----------------FVKDIWSDADVVFVNNTCFDPDLNLALAELLL 146 (205)
T ss_dssp ----------------HHHHHGHC-SEEEE--TTT-HHHHHHHHHHHT
T ss_pred ----------------hHhhhhcCCCEEEEeccccCHHHHHHHHHHHh
Confidence 000 1246899999999998887777754443
|
H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast [].; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 4ER3_A 4ER6_A 4EQZ_A 1NW3_A 3UWP_A 4ER5_A 3QOX_A 3SX0_A 4ER7_A 3SR4_A .... |
| >PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.034 Score=49.77 Aligned_cols=54 Identities=17% Similarity=0.165 Sum_probs=45.8
Q ss_pred EEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 124 SLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 124 VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
|.|+||--|.+++.+.+.+ .+|+++|+++.-|+.++.|+..++. ..++.++..|
T Consensus 1 vaDIGtDHgyLpi~L~~~~~~~~~ia~DI~~gpL~~A~~~i~~~~l----~~~i~~rlgd 56 (205)
T PF04816_consen 1 VADIGTDHGYLPIYLLKNGKAPKAIAVDINPGPLEKAKENIAKYGL----EDRIEVRLGD 56 (205)
T ss_dssp EEEET-STTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT-----TTTEEEEE-S
T ss_pred CceeccchhHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCC----cccEEEEECC
Confidence 6899999999999999986 4899999999999999999999875 4678887766
|
; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity; PDB: 3LEC_A 3KU1_G 3KR9_A 3GNL_B. |
| >PRK11760 putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.016 Score=55.64 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=68.9
Q ss_pred eechHHHHHHHHhhhcC----CCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCC
Q 020158 98 VWKAELVLADFVMHKMC----TSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQG 173 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~----~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~ 173 (330)
.=+|++-|.+.+..... .....+|+++|||||++|-.+-.+.++|.+|+++|.++ | ..++.. .+
T Consensus 185 pSRs~lKLeEA~~~F~~~~~~~~~~~~g~~vlDLGAsPGGWT~~L~~rG~~V~AVD~g~-l----~~~L~~-------~~ 252 (357)
T PRK11760 185 PSRSTLKLEEAFHVFIPRDEWDERLAPGMRAVDLGAAPGGWTYQLVRRGMFVTAVDNGP-M----AQSLMD-------TG 252 (357)
T ss_pred CChHHHHHHHHHHhcccchhhhcccCCCCEEEEeCCCCcHHHHHHHHcCCEEEEEechh-c----CHhhhC-------CC
Confidence 35677777776544321 01246899999999999999999999999999999763 2 222222 24
Q ss_pred eeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 174 SVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 174 ~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
+|...+.+=....+ ....+|+|+ +|++-.+. .+++.+.+.+..+-
T Consensus 253 ~V~h~~~d~fr~~p-----------------------~~~~vDwvV-cDmve~P~---rva~lm~~Wl~~g~ 297 (357)
T PRK11760 253 QVEHLRADGFKFRP-----------------------PRKNVDWLV-CDMVEKPA---RVAELMAQWLVNGW 297 (357)
T ss_pred CEEEEeccCcccCC-----------------------CCCCCCEEE-EecccCHH---HHHHHHHHHHhcCc
Confidence 55555544222111 124788877 56665444 56677777776553
|
|
| >KOG2940 consensus Predicted methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0011 Score=59.74 Aligned_cols=154 Identities=12% Similarity=0.117 Sum_probs=96.0
Q ss_pred CCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 121 GIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
...+++||||.|.++-.+-..+ .+++.+|.+-+|++.++..- .+.+.+..+--.+ +...+
T Consensus 73 fp~a~diGcs~G~v~rhl~~e~vekli~~DtS~~M~~s~~~~q---------dp~i~~~~~v~DE--E~Ldf-------- 133 (325)
T KOG2940|consen 73 FPTAFDIGCSLGAVKRHLRGEGVEKLIMMDTSYDMIKSCRDAQ---------DPSIETSYFVGDE--EFLDF-------- 133 (325)
T ss_pred CcceeecccchhhhhHHHHhcchhheeeeecchHHHHHhhccC---------CCceEEEEEecch--hcccc--------
Confidence 3689999999998887776665 68999999999998887431 1223332222111 11101
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE-------eeeeCcccccchhhhccccc
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA-------LEKRYNFSLNDLDVVANGYS 272 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va-------~~~R~~f~~~~~d~v~~~y~ 272 (330)
...++|+||.+--+++..+++.-+..++..++| ++.++-+ ++.|...++.+++-. .|.+
T Consensus 134 -----------~ens~DLiisSlslHW~NdLPg~m~~ck~~lKP--Dg~FiasmlggdTLyELR~slqLAelER~-GGiS 199 (325)
T KOG2940|consen 134 -----------KENSVDLIISSLSLHWTNDLPGSMIQCKLALKP--DGLFIASMLGGDTLYELRCSLQLAELERE-GGIS 199 (325)
T ss_pred -----------cccchhhhhhhhhhhhhccCchHHHHHHHhcCC--CccchhHHhccccHHHHHHHhhHHHHHhc-cCCC
Confidence 235799999999999999999999999999966 4555443 566777777666543 2333
Q ss_pred hhhhhhhhhhcccccccccCCCeeeEEecCCC----cCccc
Q 020158 273 HFRSYIMEEGEHRRFERESFPAFVGKCIDLNE----FPQYV 309 (330)
Q Consensus 273 ~f~~~l~~~~~~~~~~~~~~~~f~v~~i~~~~----~p~~~ 309 (330)
++-+-+....+++++-. ..||..--++.+. +|.+|
T Consensus 200 phiSPf~qvrDiG~LL~--rAGF~m~tvDtDEi~v~Yp~mf 238 (325)
T KOG2940|consen 200 PHISPFTQVRDIGNLLT--RAGFSMLTVDTDEIVVGYPRMF 238 (325)
T ss_pred CCcChhhhhhhhhhHHh--hcCcccceecccceeecCchHH
Confidence 33333332223333311 1366666666543 45555
|
|
| >KOG3987 consensus Uncharacterized conserved protein DREV/CGI-81 [Function unknown] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.00042 Score=61.50 Aligned_cols=95 Identities=16% Similarity=0.246 Sum_probs=72.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
..+++||||||-|-++..++..-.+|++|+++..|...+++.- .| ....++|.+.
T Consensus 112 ~~~~lLDlGAGdGeit~~m~p~feevyATElS~tMr~rL~kk~-yn----------Vl~~~ew~~t-------------- 166 (288)
T KOG3987|consen 112 EPVTLLDLGAGDGEITLRMAPTFEEVYATELSWTMRDRLKKKN-YN----------VLTEIEWLQT-------------- 166 (288)
T ss_pred CCeeEEeccCCCcchhhhhcchHHHHHHHHhhHHHHHHHhhcC-Cc----------eeeehhhhhc--------------
Confidence 3589999999999999999988788999999988887776310 01 1234666653
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.-++|+|.|-.++=.....-.|++-|...+++.. +.+++|
T Consensus 167 ------------~~k~dli~clNlLDRc~~p~kLL~Di~~vl~psn-grviva 206 (288)
T KOG3987|consen 167 ------------DVKLDLILCLNLLDRCFDPFKLLEDIHLVLAPSN-GRVIVA 206 (288)
T ss_pred ------------CceeehHHHHHHHHhhcChHHHHHHHHHHhccCC-CcEEEE
Confidence 2379999999988777788899999999998843 334444
|
|
| >PF13679 Methyltransf_32: Methyltransferase domain | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0043 Score=51.99 Aligned_cols=48 Identities=21% Similarity=0.275 Sum_probs=41.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHH-----h-CCeEEEEeCchHHHHHHHHHHHHcc
Q 020158 119 FNGIISLELGAGTGLAGILLSR-----V-AWTVFLTDHGNYILDNCAKNVQLNS 166 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~-----~-~~~V~~TD~~~~~L~~~~~Nv~~N~ 166 (330)
-+..+|+|+|||-|.+|.+++. . +.+|++.|.++..++.+.+..+...
T Consensus 24 ~~~~~vvD~GsG~GyLs~~La~~l~~~~~~~~v~~iD~~~~~~~~a~~~~~~~~ 77 (141)
T PF13679_consen 24 KRCITVVDLGSGKGYLSRALAHLLCNSSPNLRVLGIDCNESLVESAQKRAQKLG 77 (141)
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHhcCCCCeEEEEECCcHHHHHHHHHHHHhc
Confidence 5678999999999999999998 3 6799999999998888887776544
|
|
| >PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.011 Score=59.42 Aligned_cols=58 Identities=9% Similarity=0.068 Sum_probs=46.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
-.|.+|||++||.|-=+..+|.. ...|++.|+++.-+..++.|+++-+. .++.+...|
T Consensus 112 ~pg~~VLD~CAAPGgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~-----~nv~v~~~D 172 (470)
T PRK11933 112 NAPQRVLDMAAAPGSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGV-----SNVALTHFD 172 (470)
T ss_pred CCCCEEEEeCCCccHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CeEEEEeCc
Confidence 46789999999999777777765 25899999999999999999998663 456555544
|
|
| >PHA01634 hypothetical protein | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0031 Score=51.85 Aligned_cols=51 Identities=8% Similarity=-0.043 Sum_probs=46.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSG 167 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~ 167 (330)
-.+++++|+++|+++|-.+|..+..| +.|++...++.+.+.++.|+..|..
T Consensus 25 idvk~KtV~dIGA~iGdSaiYF~l~GAK~Vva~E~~~kl~k~~een~k~nnI 76 (156)
T PHA01634 25 LNVYQRTIQIVGADCGSSALYFLLRGASFVVQYEKEEKLRKKWEEVCAYFNI 76 (156)
T ss_pred eeecCCEEEEecCCccchhhHHhhcCccEEEEeccCHHHHHHHHHHhhhhee
Confidence 46799999999999999999999885 6899999999999999999999864
|
|
| >KOG1501 consensus Arginine N-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0033 Score=61.48 Aligned_cols=98 Identities=19% Similarity=0.199 Sum_probs=67.9
Q ss_pred eEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccc
Q 020158 123 ISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQER 201 (330)
Q Consensus 123 ~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~ 201 (330)
-||++|+||||+|+.+++.| ..|++.+.-.-|.+.+++-+..|+. ..++.+..-.=.+..
T Consensus 69 ~vLdigtGTGLLSmMAvragaD~vtA~EvfkPM~d~arkI~~kng~----SdkI~vInkrStev~--------------- 129 (636)
T KOG1501|consen 69 FVLDIGTGTGLLSMMAVRAGADSVTACEVFKPMVDLARKIMHKNGM----SDKINVINKRSTEVK--------------- 129 (636)
T ss_pred EEEEccCCccHHHHHHHHhcCCeEEeehhhchHHHHHHHHHhcCCC----ccceeeeccccceee---------------
Confidence 68999999999999999985 5899999888899999988888875 456666533211110
Q ss_pred cccCccchhccCCeeEEEEeccccC---cccHHHHHHHHHHhccCCCC
Q 020158 202 YSWNSSELKEVQRASVLLAADVIYS---DDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 202 ~~w~~~~~~~~~~~DlIlaaDviY~---~~~~~~l~~tl~~lL~~~~~ 246 (330)
+-...+.|++++.|+.-. ...++.+-.+..+|+.++++
T Consensus 130 -------vg~~~RadI~v~e~fdtEligeGalps~qhAh~~L~~~nc~ 170 (636)
T KOG1501|consen 130 -------VGGSSRADIAVREDFDTELIGEGALPSLQHAHDMLLVDNCK 170 (636)
T ss_pred -------ecCcchhhhhhHhhhhhhhhccccchhHHHHHHHhcccCCe
Confidence 000124666666654322 44677788888888887653
|
|
| >PF02384 N6_Mtase: N-6 DNA Methylase; InterPro: IPR003356 This domain is fpound in N-6 adenine-specific DNA methylase (2 | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.011 Score=56.02 Aligned_cols=60 Identities=12% Similarity=0.119 Sum_probs=42.8
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHH---------hCCeEEEEeCchHHHHHHHHHHHHcc
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSR---------VAWTVFLTDHGNYILDNCAKNVQLNS 166 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~---------~~~~V~~TD~~~~~L~~~~~Nv~~N~ 166 (330)
.++++|.... ....+.+|+|-.||+|-.-+.+.. ...++++.|+++.++.+++.|+.+++
T Consensus 33 ~i~~l~~~~~---~~~~~~~VlDPacGsG~fL~~~~~~i~~~~~~~~~~~i~G~ei~~~~~~la~~nl~l~~ 101 (311)
T PF02384_consen 33 EIVDLMVKLL---NPKKGDSVLDPACGSGGFLVAAMEYIKEKRNKIKEINIYGIEIDPEAVALAKLNLLLHG 101 (311)
T ss_dssp HHHHHHHHHH---TT-TTEEEEETT-TTSHHHHHHHHHHHTCHHHHCCEEEEEEES-HHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhh---hccccceeechhhhHHHHHHHHHHhhcccccccccceeEeecCcHHHHHHHHhhhhhhc
Confidence 3445554443 335677999999999976666655 24689999999999999999998765
|
1.1.72 from EC) from Type I and Type IC restriction systems. These enzymes are responsible for the methylation of specific DNA sequences in order to prevent the host from digesting its own genome via its restriction enzymes. These methylases have the same sequence specificity as their corresponding restriction enzymes. The type I restriction and modification system is composed of three polypeptides R, M and S. The M and S subunits together form a methyltransferase that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit, the complex can also act as an endonuclease, binding to the same target sequence but cutting the DNA some distance from this site. Whether the DNA is cut or modified depends on the methylation state of the target sequence. When the target site is unmodified, the DNA is cut. When the target site is hemimethylated, the complex acts as a maintenance methyltransferase, modifying the DNA so that both strands become methylated.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2F8L_A 2Y7C_C 2Y7H_C 2AR0_B 3KHK_A 3LKD_A 2OKC_B. |
| >KOG1661 consensus Protein-L-isoaspartate(D-aspartate) O-methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.015 Score=51.87 Aligned_cols=71 Identities=15% Similarity=0.204 Sum_probs=51.3
Q ss_pred CeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh----CCeEEEEeCchHHHHHHHHHHHHcc
Q 020158 95 GLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV----AWTVFLTDHGNYILDNCAKNVQLNS 166 (330)
Q Consensus 95 G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~----~~~V~~TD~~~~~L~~~~~Nv~~N~ 166 (330)
|+.+-=+|..+=.++++.. ...+.+|.+.|++|+|+|.++-.+|++ |..+++.|.-+++++..++|+..--
T Consensus 58 G~n~~iSAp~mha~~le~L-~~~L~pG~s~LdvGsGSGYLt~~~~~mvg~~g~~~~GIEh~~eLVe~Sk~nl~k~i 132 (237)
T KOG1661|consen 58 GYNLTISAPHMHATALEYL-DDHLQPGASFLDVGSGSGYLTACFARMVGATGGNVHGIEHIPELVEYSKKNLDKDI 132 (237)
T ss_pred CCceEEcchHHHHHHHHHH-HHhhccCcceeecCCCccHHHHHHHHHhcCCCccccchhhhHHHHHHHHHHHHhhc
Confidence 4333346665555544432 123578999999999999888777765 3455999999999999999997643
|
|
| >TIGR02987 met_A_Alw26 type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.01 Score=60.54 Aligned_cols=47 Identities=13% Similarity=0.133 Sum_probs=39.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC----------CeEEEEeCchHHHHHHHHHHHHcc
Q 020158 120 NGIISLELGAGTGLAGILLSRVA----------WTVFLTDHGNYILDNCAKNVQLNS 166 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~----------~~V~~TD~~~~~L~~~~~Nv~~N~ 166 (330)
.+.+|||.|||+|...+.++... ..+++.|+++.++..++.|+....
T Consensus 31 ~~~~ilDP~cGsG~fl~~~~~~~~~~~~~~~~~~~i~g~DId~~a~~~a~~~l~~~~ 87 (524)
T TIGR02987 31 TKTKIIDPCCGDGRLIAALLKKNEEINYFKEVELNIYFADIDKTLLKRAKKLLGEFA 87 (524)
T ss_pred cceEEEeCCCCccHHHHHHHHHHHhcCCcccceeeeeeechhHHHHHHHHHHHhhcC
Confidence 45799999999998777776542 478999999999999999987654
|
Members of this family are the m6-adenine DNA methyltransferase protein, or domain of a fusion protein that also carries m5 cytosine methyltransferase activity, of type II restriction systems of the Alw26I/Eco31I/Esp3I family. A methyltransferase of this family is alway accompanied by a type II restriction endonuclease from the Alw26I/Eco31I/Esp3I family (TIGR02986) and by an adenine-specific modification methyltransferase. Members of this family are unusual in that regions of similarity to homologs outside this family are circularly permuted. |
| >COG2521 Predicted archaeal methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0031 Score=57.10 Aligned_cols=135 Identities=14% Similarity=0.175 Sum_probs=84.1
Q ss_pred CCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCC
Q 020158 92 PSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFS 170 (330)
Q Consensus 92 ~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~ 170 (330)
.+.+.--|.-+..=+.-+ ..-+|.+|||-..|.|.++|.++++|+ +|+-.+.+|.+|++++-|-=.-.. .
T Consensus 113 rt~~tdP~~Dt~~Kv~~V-------~~~~G~rVLDtC~GLGYtAi~a~~rGA~~VitvEkdp~VLeLa~lNPwSr~l-~- 183 (287)
T COG2521 113 RTKGTDPLEDTLAKVELV-------KVKRGERVLDTCTGLGYTAIEALERGAIHVITVEKDPNVLELAKLNPWSREL-F- 183 (287)
T ss_pred cccCcCcHHHHHhhhhee-------ccccCCEeeeeccCccHHHHHHHHcCCcEEEEEeeCCCeEEeeccCCCCccc-c-
Confidence 344555565554433322 234799999999999999999999988 999999999999887755311111 0
Q ss_pred CCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc---cHHHHHHHHHHhccCCCCe
Q 020158 171 HQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD---LTDALFHTLKRLMPLGSKK 247 (330)
Q Consensus 171 ~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~---~~~~l~~tl~~lL~~~~~~ 247 (330)
...+++...|-.+.. +.+ ....||.||---.-+... ..+.|-+.+.++|++++..
T Consensus 184 -~~~i~iilGD~~e~V-------------~~~--------~D~sfDaIiHDPPRfS~AgeLYseefY~El~RiLkrgGrl 241 (287)
T COG2521 184 -EIAIKIILGDAYEVV-------------KDF--------DDESFDAIIHDPPRFSLAGELYSEEFYRELYRILKRGGRL 241 (287)
T ss_pred -ccccEEecccHHHHH-------------hcC--------CccccceEeeCCCccchhhhHhHHHHHHHHHHHcCcCCcE
Confidence 123444433322211 111 235799988322222211 3567788889999999887
Q ss_pred EEEEEeee-eC
Q 020158 248 VLYLALEK-RY 257 (330)
Q Consensus 248 ~i~va~~~-R~ 257 (330)
.-|+..+. |+
T Consensus 242 FHYvG~Pg~ry 252 (287)
T COG2521 242 FHYVGNPGKRY 252 (287)
T ss_pred EEEeCCCCccc
Confidence 77887554 44
|
|
| >PF01269 Fibrillarin: Fibrillarin; InterPro: IPR000692 Fibrillarin is a component of a nucleolar small nuclear ribonucleoprotein (SnRNP), functioning in vivo in ribosomal RNA processing [, ] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.23 Score=44.94 Aligned_cols=171 Identities=19% Similarity=0.229 Sum_probs=94.0
Q ss_pred CcCeEeechHH-HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCC
Q 020158 93 SVGLQVWKAEL-VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGV 168 (330)
Q Consensus 93 ~~G~~vW~aa~-~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~ 168 (330)
..+.++|+--. -||..++.....-...+|.+||=||+.+|.+--.++-. + ..|++.+.++.....+- ++...
T Consensus 45 ~~eYR~W~P~RSKLaAai~~Gl~~~~ik~gskVLYLGAasGTTVSHvSDIvg~~G~VYaVEfs~r~~rdL~-~la~~--- 120 (229)
T PF01269_consen 45 KVEYRVWNPFRSKLAAAILKGLENIPIKPGSKVLYLGAASGTTVSHVSDIVGPDGVVYAVEFSPRSMRDLL-NLAKK--- 120 (229)
T ss_dssp -EEEEEE-TTT-HHHHHHHTT-S--S--TT-EEEEETTTTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHH-HHHHH---
T ss_pred ccceeecCchhhHHHHHHHcCccccCCCCCCEEEEecccCCCccchhhhccCCCCcEEEEEecchhHHHHH-HHhcc---
Confidence 45899998722 33444433321124457899999999999666566655 3 48999999996554443 22222
Q ss_pred CCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeE
Q 020158 169 FSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKV 248 (330)
Q Consensus 169 ~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~ 248 (330)
..|+--.--|-..+ ..|. ...+.+|+|+ +||- .++..+-++.....+|+++ +.
T Consensus 121 ---R~NIiPIl~DAr~P--------------~~Y~------~lv~~VDvI~-~DVa-Qp~Qa~I~~~Na~~fLk~g--G~ 173 (229)
T PF01269_consen 121 ---RPNIIPILEDARHP--------------EKYR------MLVEMVDVIF-QDVA-QPDQARIAALNARHFLKPG--GH 173 (229)
T ss_dssp ---STTEEEEES-TTSG--------------GGGT------TTS--EEEEE-EE-S-STTHHHHHHHHHHHHEEEE--EE
T ss_pred ---CCceeeeeccCCCh--------------HHhh------cccccccEEE-ecCC-ChHHHHHHHHHHHhhccCC--cE
Confidence 23443333332222 1111 1124677766 4555 4688889999999999775 56
Q ss_pred EEEEeeeeCcccccchhhhccccchhhhhhhhhhcccccccccCCCeee-EEecCCCcCcccccccCCC
Q 020158 249 LYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPAFVG-KCIDLNEFPQYVREYDRGN 316 (330)
Q Consensus 249 i~va~~~R~~f~~~~~d~v~~~y~~f~~~l~~~~~~~~~~~~~~~~f~v-~~i~~~~~p~~~~~yer~~ 316 (330)
++++.+.|.. |+.++.-.-|..-+.... +.+|.. +++.+. +|++..
T Consensus 174 ~~i~iKa~si------D~t~~p~~vf~~e~~~L~---------~~~~~~~e~i~Le-------Py~~dH 220 (229)
T PF01269_consen 174 LIISIKARSI------DSTADPEEVFAEEVKKLK---------EEGFKPLEQITLE-------PYERDH 220 (229)
T ss_dssp EEEEEEHHHH-------SSSSHHHHHHHHHHHHH---------CTTCEEEEEEE-T-------TTSTTE
T ss_pred EEEEEecCcc------cCcCCHHHHHHHHHHHHH---------HcCCChheEeccC-------CCCCCc
Confidence 6777676653 444444455555544321 235655 677766 677764
|
It is associated with U3, U8 and U13 small nuclear RNAs in mammals [] and is similar to the yeast NOP1 protein []. Fibrillarin has a well conserved sequence of around 320 amino acids, and contains 3 domains, an N-terminal Gly/Arg-rich region; a central domain resembling other RNA-binding proteins and containing an RNP-2-like consensus sequence; and a C-terminal alpha-helical domain. An evolutionarily related pre-rRNA processing protein, which lacks the Gly/Arg-rich domain, has been found in various archaebacteria.; GO: 0003723 RNA binding, 0008168 methyltransferase activity, 0006364 rRNA processing, 0008033 tRNA processing; PDB: 3PLA_E 3ID6_C 3ID5_B 1NT2_A 3NVK_J 2NNW_B 3NVM_B 3NMU_J 1PRY_A 1G8A_A .... |
| >PLN02232 ubiquinone biosynthesis methyltransferase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.014 Score=49.98 Aligned_cols=76 Identities=9% Similarity=-0.053 Sum_probs=55.2
Q ss_pred EEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEecccc
Q 020158 146 FLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIY 225 (330)
Q Consensus 146 ~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY 225 (330)
++.|.+++||+.++++........ ..++++...|-.+... ..+.||+|+++.++.
T Consensus 1 ~GvD~S~~ML~~A~~~~~~~~~~~--~~~i~~~~~d~~~lp~-----------------------~~~~fD~v~~~~~l~ 55 (160)
T PLN02232 1 MGLDFSSEQLAVAATRQSLKARSC--YKCIEWIEGDAIDLPF-----------------------DDCEFDAVTMGYGLR 55 (160)
T ss_pred CeEcCCHHHHHHHHHhhhcccccC--CCceEEEEechhhCCC-----------------------CCCCeeEEEecchhh
Confidence 368999999999987765322110 2357777766543210 235799999999998
Q ss_pred CcccHHHHHHHHHHhccCCCC
Q 020158 226 SDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 226 ~~~~~~~l~~tl~~lL~~~~~ 246 (330)
+......+++.+.++|++|+.
T Consensus 56 ~~~d~~~~l~ei~rvLkpGG~ 76 (160)
T PLN02232 56 NVVDRLRAMKEMYRVLKPGSR 76 (160)
T ss_pred cCCCHHHHHHHHHHHcCcCeE
Confidence 888899999999999988743
|
|
| >PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2 | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.014 Score=53.68 Aligned_cols=106 Identities=18% Similarity=0.116 Sum_probs=69.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+.++||-||-|.|.+.-.+.++. .+|++.|+++.+++.+++-+........ ..++++..-|=...
T Consensus 76 ~p~~VLiiGgG~G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~-d~r~~i~~~Dg~~~------------ 142 (246)
T PF01564_consen 76 NPKRVLIIGGGDGGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLD-DPRVRIIIGDGRKF------------ 142 (246)
T ss_dssp ST-EEEEEESTTSHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGG-STTEEEEESTHHHH------------
T ss_pred CcCceEEEcCCChhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccC-CCceEEEEhhhHHH------------
Confidence 67899999999998887777764 7999999999999999987765432111 35666655542111
Q ss_pred cccccccCccchh-ccC-CeeEEEE--eccccCc--ccHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELK-EVQ-RASVLLA--ADVIYSD--DLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~-~~~-~~DlIla--aDviY~~--~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
+. ..+ +||+|+. .|-.... -....+++.+++.|+++ +++.+
T Consensus 143 -----------l~~~~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~--Gv~v~ 189 (246)
T PF01564_consen 143 -----------LKETQEEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD--GVLVL 189 (246)
T ss_dssp -----------HHTSSST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE--EEEEE
T ss_pred -----------HHhccCCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC--cEEEE
Confidence 11 123 7999986 2211111 24678999999999764 44444
|
5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B .... |
| >COG1189 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.041 Score=50.06 Aligned_cols=119 Identities=20% Similarity=0.187 Sum_probs=77.2
Q ss_pred CeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHH-HHHHHHHHHccCCCCCC
Q 020158 95 GLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYIL-DNCAKNVQLNSGVFSHQ 172 (330)
Q Consensus 95 G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L-~~~~~Nv~~N~~~~~~~ 172 (330)
..-|=++++-|...+.+. .-.++|++|||+||-||=..-++... +++|++.|.+-.-| .-++ | .
T Consensus 57 ~~yVSRG~~KL~~ale~F---~l~~k~kv~LDiGsSTGGFTd~lLq~gAk~VyavDVG~~Ql~~kLR-----~------d 122 (245)
T COG1189 57 QPYVSRGGLKLEKALEEF---ELDVKGKVVLDIGSSTGGFTDVLLQRGAKHVYAVDVGYGQLHWKLR-----N------D 122 (245)
T ss_pred cCccccHHHHHHHHHHhc---CcCCCCCEEEEecCCCccHHHHHHHcCCcEEEEEEccCCccCHhHh-----c------C
Confidence 445678999999998876 36789999999999999888888888 57999999984222 1122 1 1
Q ss_pred CeeE-EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 173 GSVH-VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 173 ~~v~-v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
.++. ....+.....+ .++ .+..|+|++-..+- ....++-.+..+++++...++++
T Consensus 123 ~rV~~~E~tN~r~l~~-------------------~~~--~~~~d~~v~DvSFI---SL~~iLp~l~~l~~~~~~~v~Lv 178 (245)
T COG1189 123 PRVIVLERTNVRYLTP-------------------EDF--TEKPDLIVIDVSFI---SLKLILPALLLLLKDGGDLVLLV 178 (245)
T ss_pred CcEEEEecCChhhCCH-------------------HHc--ccCCCeEEEEeehh---hHHHHHHHHHHhcCCCceEEEEe
Confidence 2222 23333222211 112 23678888765544 45567778888887765555444
|
|
| >COG0500 SmtA SAM-dependent methyltransferases [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.18 Score=39.69 Aligned_cols=102 Identities=21% Similarity=0.222 Sum_probs=61.7
Q ss_pred EEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC-CCCCccCCCCCccc
Q 020158 124 SLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP-WPPIFSLGNSSASQ 199 (330)
Q Consensus 124 VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~-~~~~~~~~~~~~~~ 199 (330)
++|+|||+|... .++... ..+++.|.++.++...+.+... .. ...+.+...++... .+
T Consensus 52 ~ld~~~g~g~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~------------ 113 (257)
T COG0500 52 VLDIGCGTGRLA-LLARLGGRGAYVVGVDLSPEMLALARARAEG-AG----LGLVDFVVADALGGVLP------------ 113 (257)
T ss_pred eEEecCCcCHHH-HHHHhCCCCceEEEEeCCHHHHHHHHhhhhh-cC----CCceEEEEeccccCCCC------------
Confidence 999999999876 444443 3788999999888884443332 21 11145555555442 11
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
+.....+|++......+... ...++..+.+.++++ +.+++....
T Consensus 114 ---------~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~l~~~--g~~~~~~~~ 157 (257)
T COG0500 114 ---------FEDSASFDLVISLLVLHLLP-PAKALRELLRVLKPG--GRLVLSDLL 157 (257)
T ss_pred ---------CCCCCceeEEeeeeehhcCC-HHHHHHHHHHhcCCC--cEEEEEecc
Confidence 00113799994444444444 788889999999764 344444333
|
|
| >COG1041 Predicted DNA modification methylase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.052 Score=52.10 Aligned_cols=60 Identities=18% Similarity=0.108 Sum_probs=51.3
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHcc
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNS 166 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~ 166 (330)
-||+.+..- ...-+|..|||==||||-.-+.+...|.+|+++|++..|+.-++.|++.-+
T Consensus 184 ~lAR~mVNL---a~v~~G~~vlDPFcGTGgiLiEagl~G~~viG~Did~~mv~gak~Nl~~y~ 243 (347)
T COG1041 184 RLARAMVNL---ARVKRGELVLDPFCGTGGILIEAGLMGARVIGSDIDERMVRGAKINLEYYG 243 (347)
T ss_pred HHHHHHHHH---hccccCCEeecCcCCccHHHHhhhhcCceEeecchHHHHHhhhhhhhhhhC
Confidence 455555443 255689999999999999999999999999999999999999999998865
|
|
| >KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.033 Score=50.00 Aligned_cols=98 Identities=11% Similarity=0.115 Sum_probs=71.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+|.+||++|=|.|++.-.+-..- ..-++...+|++++.++.+.=.. ..+|.+.+..|.+..+..
T Consensus 100 tkggrvLnVGFGMgIidT~iQe~~p~~H~IiE~hp~V~krmr~~gw~e------k~nViil~g~WeDvl~~L-------- 165 (271)
T KOG1709|consen 100 TKGGRVLNVGFGMGIIDTFIQEAPPDEHWIIEAHPDVLKRMRDWGWRE------KENVIILEGRWEDVLNTL-------- 165 (271)
T ss_pred hCCceEEEeccchHHHHHHHhhcCCcceEEEecCHHHHHHHHhccccc------ccceEEEecchHhhhccc--------
Confidence 578999999999999887776652 45566789999999999876443 478899999999875443
Q ss_pred cccccccCccchhccCCeeEEEEeccc-cCcccHHHHHHHHHHhccCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVI-YSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDvi-Y~~~~~~~l~~tl~~lL~~~ 244 (330)
..+.||=|+- |.. -.-+.+..+.+.+-+||+|+
T Consensus 166 -------------~d~~FDGI~y-DTy~e~yEdl~~~hqh~~rLLkP~ 199 (271)
T KOG1709|consen 166 -------------PDKHFDGIYY-DTYSELYEDLRHFHQHVVRLLKPE 199 (271)
T ss_pred -------------cccCcceeEe-echhhHHHHHHHHHHHHhhhcCCC
Confidence 2345887652 222 12235677788889999876
|
|
| >PRK00050 16S rRNA m(4)C1402 methyltranserfase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.029 Score=53.07 Aligned_cols=46 Identities=9% Similarity=-0.044 Sum_probs=39.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHH
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
-+|..+||.+||.|--+..++... .+|++.|.++++++.++.++..
T Consensus 18 ~pg~~vlD~TlG~GGhS~~il~~~~~~g~VigiD~D~~al~~ak~~L~~ 66 (296)
T PRK00050 18 KPDGIYVDGTFGGGGHSRAILERLGPKGRLIAIDRDPDAIAAAKDRLKP 66 (296)
T ss_pred CCCCEEEEeCcCChHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHhhcc
Confidence 456799999999999998888773 6899999999999999987643
|
|
| >KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.099 Score=47.36 Aligned_cols=102 Identities=17% Similarity=0.158 Sum_probs=70.2
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
..++.+++||||.=||..+++.|.. +.+|++.|++++..+...+-++..+. ..++.+...+-.+..+..
T Consensus 70 ~~~~ak~~lelGvfTGySaL~~Alalp~dGrv~a~eid~~~~~~~~~~~k~agv----~~KI~~i~g~a~esLd~l---- 141 (237)
T KOG1663|consen 70 RLLNAKRTLELGVFTGYSALAVALALPEDGRVVAIEIDADAYEIGLELVKLAGV----DHKITFIEGPALESLDEL---- 141 (237)
T ss_pred HHhCCceEEEEecccCHHHHHHHHhcCCCceEEEEecChHHHHHhHHHHHhccc----cceeeeeecchhhhHHHH----
Confidence 3478899999999999999998887 67999999999988888776666554 456777665533321110
Q ss_pred CCCccccccccCccchh--ccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 194 NSSASQERYSWNSSELK--EVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~--~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
+. ..+.||+++.- .+....-....-+-+|+++|
T Consensus 142 ---------------~~~~~~~tfDfaFvD---adK~nY~~y~e~~l~Llr~G 176 (237)
T KOG1663|consen 142 ---------------LADGESGTFDFAFVD---ADKDNYSNYYERLLRLLRVG 176 (237)
T ss_pred ---------------HhcCCCCceeEEEEc---cchHHHHHHHHHHHhhcccc
Confidence 11 24689998742 23334446666667788765
|
|
| >PF01234 NNMT_PNMT_TEMT: NNMT/PNMT/TEMT family; InterPro: IPR000940 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.014 Score=54.09 Aligned_cols=47 Identities=19% Similarity=0.239 Sum_probs=34.1
Q ss_pred CCCCCCCeEEEEcCccCHHHHHHH-HhCCeEEEEeCchHHHHHHHHHH
Q 020158 116 SSDFNGIISLELGAGTGLAGILLS-RVAWTVFLTDHGNYILDNCAKNV 162 (330)
Q Consensus 116 ~~~~~g~~VLELG~GtGL~gl~lA-~~~~~V~~TD~~~~~L~~~~~Nv 162 (330)
+...+|.++||+|||.-+..++.| ....+|+++|+.+.-++.+++=+
T Consensus 52 ~g~~~g~~llDiGsGPtiy~~lsa~~~f~~I~l~dy~~~N~~el~kWl 99 (256)
T PF01234_consen 52 SGGVKGETLLDIGSGPTIYQLLSACEWFEEIVLSDYSEQNREELEKWL 99 (256)
T ss_dssp TSSS-EEEEEEES-TT--GGGTTGGGTEEEEEEEESSHHHHHHHHHHH
T ss_pred ccCcCCCEEEEeCCCcHHHhhhhHHHhhcceEEeeccHhhHHHHHHHH
Confidence 466789999999999987765544 45789999999998777776654
|
The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. Several cytoplasmic vertebrate methyltransferases are evolutionary related [], including nicotinamide N-methyltransferase (2.1.1.1 from EC) (NNMT); phenylethanolamine N-methyltransferase (2.1.1.28 from EC) (PNMT); and thioether S-methyltransferase (2.1.1.96 from EC) (TEMT). NNMT catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions. This activity is important for the biotransformation of many drugs and xenobiotic compounds. PNMT catalyzes the last step in catecholamine biosynthesis, the conversion of noradrenalin to adrenalin; and TEMT catalyzes the methylation of dimethyl sulphide into trimethylsulphonium. These three enzymes use S-adenosyl-L-methionine as the methyl donor. They are proteins of 30 to 32 kDa.; GO: 0008168 methyltransferase activity; PDB: 2IIP_C 3ROD_A 2OBF_A 3HCA_B 2ONY_B 3KR1_A 2OPB_B 3KQP_B 2AN4_B 3KQM_A .... |
| >COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.12 Score=48.56 Aligned_cols=98 Identities=13% Similarity=0.112 Sum_probs=67.0
Q ss_pred CeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 122 IISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++||-||-|.|-+.-.+.++. .++++.|+++.+++.+++=+..-..... ..++.+..-|=.+.
T Consensus 78 k~VLiiGgGdG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~-dpRv~i~i~Dg~~~-------------- 142 (282)
T COG0421 78 KRVLIIGGGDGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGAD-DPRVEIIIDDGVEF-------------- 142 (282)
T ss_pred CeEEEECCCccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccC-CCceEEEeccHHHH--------------
Confidence 699999999999998888885 7999999999999999976644221111 24555554442211
Q ss_pred cccccCccchh-ccCCeeEEEEeccccCcc-----cHHHHHHHHHHhccCC
Q 020158 200 ERYSWNSSELK-EVQRASVLLAADVIYSDD-----LTDALFHTLKRLMPLG 244 (330)
Q Consensus 200 ~~~~w~~~~~~-~~~~~DlIlaaDviY~~~-----~~~~l~~tl~~lL~~~ 244 (330)
+. ...+||+||. |+.=... ....|.+.++++|+++
T Consensus 143 ---------v~~~~~~fDvIi~-D~tdp~gp~~~Lft~eFy~~~~~~L~~~ 183 (282)
T COG0421 143 ---------LRDCEEKFDVIIV-DSTDPVGPAEALFTEEFYEGCRRALKED 183 (282)
T ss_pred ---------HHhCCCcCCEEEE-cCCCCCCcccccCCHHHHHHHHHhcCCC
Confidence 11 1237999985 2221111 3688999999999764
|
|
| >COG0220 Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.14 Score=46.50 Aligned_cols=107 Identities=13% Similarity=0.068 Sum_probs=70.9
Q ss_pred CeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 122 IISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
..+||||||.|-.-+.+|+. -..+++.++....+..+.+.+...+. .++.+...|-....+.
T Consensus 50 pi~lEIGfG~G~~l~~~A~~nP~~nfiGiEi~~~~v~~~l~k~~~~~l-----~Nlri~~~DA~~~l~~----------- 113 (227)
T COG0220 50 PIVLEIGFGMGEFLVEMAKKNPEKNFLGIEIRVPGVAKALKKIKELGL-----KNLRLLCGDAVEVLDY----------- 113 (227)
T ss_pred cEEEEECCCCCHHHHHHHHHCCCCCEEEEEEehHHHHHHHHHHHHcCC-----CcEEEEcCCHHHHHHh-----------
Confidence 58999999999888888877 36899999998888777777766542 2666665553322110
Q ss_pred cccccCccchhccCCeeEEEEeccccCcc-----------cHHHHHHHHHHhccCCCCeEEEEEeeeeCc
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDD-----------LTDALFHTLKRLMPLGSKKVLYLALEKRYN 258 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~-----------~~~~l~~tl~~lL~~~~~~~i~va~~~R~~ 258 (330)
+...+..|-|. +.|-+. ..+.+++.+.+.|+++ +.++++.-....
T Consensus 114 ---------~~~~~sl~~I~---i~FPDPWpKkRH~KRRl~~~~fl~~~a~~Lk~g--G~l~~aTD~~~y 169 (227)
T COG0220 114 ---------LIPDGSLDKIY---INFPDPWPKKRHHKRRLTQPEFLKLYARKLKPG--GVLHFATDNEEY 169 (227)
T ss_pred ---------cCCCCCeeEEE---EECCCCCCCccccccccCCHHHHHHHHHHccCC--CEEEEEecCHHH
Confidence 01122445443 222221 5688999999999775 678887655544
|
|
| >COG1568 Predicted methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.081 Score=49.22 Aligned_cols=110 Identities=14% Similarity=0.140 Sum_probs=77.0
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
.++.|+.|+=+| ---|+||++|.- ..+|...|+++.+++.+.+-++.-+ ..++.+..+|..++.|..
T Consensus 149 GDL~gK~I~vvG-DDDLtsia~aLt~mpk~iaVvDIDERli~fi~k~aee~g-----~~~ie~~~~Dlr~plpe~----- 217 (354)
T COG1568 149 GDLEGKEIFVVG-DDDLTSIALALTGMPKRIAVVDIDERLIKFIEKVAEELG-----YNNIEAFVFDLRNPLPED----- 217 (354)
T ss_pred cCcCCCeEEEEc-CchhhHHHHHhcCCCceEEEEechHHHHHHHHHHHHHhC-----ccchhheeehhcccChHH-----
Confidence 678999999999 667999998876 5799999999999999998887765 366888888888875432
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHH-HHHHhccCCCCeEEEEEee
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFH-TLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~-tl~~lL~~~~~~~i~va~~ 254 (330)
...+||+++ .|.-|-...+..|+. -+..|-..++.+.+.++..
T Consensus 218 ----------------~~~kFDvfi-TDPpeTi~alk~FlgRGI~tLkg~~~aGyfgiT~r 261 (354)
T COG1568 218 ----------------LKRKFDVFI-TDPPETIKALKLFLGRGIATLKGEGCAGYFGITRR 261 (354)
T ss_pred ----------------HHhhCCeee-cCchhhHHHHHHHHhccHHHhcCCCccceEeeeec
Confidence 346899876 344443333333332 2333333444566666543
|
|
| >COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.31 Score=47.51 Aligned_cols=107 Identities=15% Similarity=0.150 Sum_probs=77.5
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCC-----------------------------------------eEEEEeCchHHH
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAW-----------------------------------------TVFLTDHGNYIL 155 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~-----------------------------------------~V~~TD~~~~~L 155 (330)
....+..++|-=||.|-+.|-+|..+. .+++.|+++.++
T Consensus 188 gw~~~~pl~DPmCGSGTi~IEAAl~~~niAPg~~R~~~f~~w~~~~~~lw~~~~~ea~~~a~~~~~~~~~~G~Did~r~i 267 (381)
T COG0116 188 GWKPDEPLLDPMCGSGTILIEAALIAANIAPGLNRRFGFEFWDWFDKDLWDKLREEAEERARRGKELPIIYGSDIDPRHI 267 (381)
T ss_pred CCCCCCccccCCCCccHHHHHHHHhccccCCccccccchhhhhhccHHHHHHHHHHHHHHHhhcCccceEEEecCCHHHH
Confidence 334557899999999999999998864 377999999999
Q ss_pred HHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC-----c---
Q 020158 156 DNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS-----D--- 227 (330)
Q Consensus 156 ~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~-----~--- 227 (330)
+.++.|+...+. .+.|.+...|-....++ ...+|+||++-. |- .
T Consensus 268 ~~Ak~NA~~AGv----~d~I~f~~~d~~~l~~~-----------------------~~~~gvvI~NPP-YGeRlg~~~~v 319 (381)
T COG0116 268 EGAKANARAAGV----GDLIEFKQADATDLKEP-----------------------LEEYGVVISNPP-YGERLGSEALV 319 (381)
T ss_pred HHHHHHHHhcCC----CceEEEEEcchhhCCCC-----------------------CCcCCEEEeCCC-cchhcCChhhH
Confidence 999999998876 57788888887664221 146888887532 22 1
Q ss_pred -ccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 228 -DLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 228 -~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.+...|.+++++.++.- ...++++
T Consensus 320 ~~LY~~fg~~lk~~~~~w-s~~v~tt 344 (381)
T COG0116 320 AKLYREFGRTLKRLLAGW-SRYVFTT 344 (381)
T ss_pred HHHHHHHHHHHHHHhcCC-ceEEEEc
Confidence 25667778888888532 3344443
|
|
| >PF03059 NAS: Nicotianamine synthase protein; InterPro: IPR004298 Nicotianamine synthase 2 | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.47 Score=44.42 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=56.8
Q ss_pred CCeEEEEcCcc-CHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHH-ccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 121 GIISLELGAGT-GLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQL-NSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 121 g~~VLELG~Gt-GL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~-N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++|+=||||. -+++|.+++. +..|++.|+++++++..++=+.. .+. ...+.+...|-.+..
T Consensus 121 p~rVaFIGSGPLPlT~i~la~~~~~~~~v~~iD~d~~A~~~a~~lv~~~~~L----~~~m~f~~~d~~~~~--------- 187 (276)
T PF03059_consen 121 PSRVAFIGSGPLPLTSIVLAKQHGPGARVHNIDIDPEANELARRLVASDLGL----SKRMSFITADVLDVT--------- 187 (276)
T ss_dssp --EEEEE---SS-HHHHHHH--HTT--EEEEEESSHHHHHHHHHHHH---HH-----SSEEEEES-GGGG----------
T ss_pred cceEEEEcCCCcchHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhcccc----cCCeEEEecchhccc---------
Confidence 46999999995 8999999975 46799999999999998876662 221 366777777643321
Q ss_pred CccccccccCccchhccCCeeEEEEecccc-CcccHHHHHHHHHHhccCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIY-SDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY-~~~~~~~l~~tl~~lL~~~ 244 (330)
.+...||+|+-|-.+. +...-..++.-|.+.+++|
T Consensus 188 --------------~dl~~~DvV~lAalVg~~~e~K~~Il~~l~~~m~~g 223 (276)
T PF03059_consen 188 --------------YDLKEYDVVFLAALVGMDAEPKEEILEHLAKHMAPG 223 (276)
T ss_dssp --------------GG----SEEEE-TT-S----SHHHHHHHHHHHS-TT
T ss_pred --------------cccccCCEEEEhhhcccccchHHHHHHHHHhhCCCC
Confidence 1235899887766665 5667788999999999765
|
5.1.43 from EC catalyzes the trimerization of S-adenosylmethionine to yield one molecule of nicotianamine. Nicotianamine has an important role in plant iron uptake mechanisms. Plants adopt two strategies (termed I and II) of iron acquisition. Strategy I is adopted by all higher plants except graminaceous plants, which adopt strategy II [, ]. In strategy I plants, the role of nicotianamine is not fully determined: possible roles include the formation of more stable complexes with ferrous than with ferric ion, which might serve as a sensor of the physiological status of iron within a plant, or which might be involved in the transport of iron []. In strategy II (graminaceous) plants, nicotianamine is the key intermediate (and nicotianamine synthase the key enzyme) in the synthesis of the mugineic family (the only known family in plants) of phytosiderophores. Phytosiderophores are iron chelators whose secretion by the roots is greatly increased in instances of iron deficiency []. The 3D structures of five example NAS from Methanothermobacter thermautotrophicus reveal the monomer to consist of a five-helical bundle N-terminal domain on top of a classic Rossmann fold C-terminal domain. The N-terminal domain is unique to the NAS family, whereas the C-terminal domain is homologous to the class I family of SAM-dependent methyltransferases. An active site is created at the interface of the two domains, at the rim of a large cavity that corresponds to the nucleotide binding site such as is found in other proteins adopting a Rossmann fold [].; GO: 0030410 nicotianamine synthase activity, 0030418 nicotianamine biosynthetic process; PDB: 3O31_B 3FPH_A 3FPJ_A 3FPE_B 3FPF_B 3FPG_B. |
| >KOG2078 consensus tRNA modification enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.042 Score=53.82 Aligned_cols=86 Identities=14% Similarity=0.179 Sum_probs=65.9
Q ss_pred CCCcCeEeechHHHHHHHHhhhcCCCCCC-CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCC
Q 020158 91 IPSVGLQVWKAELVLADFVMHKMCTSSDF-NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVF 169 (330)
Q Consensus 91 ~~~~G~~vW~aa~~La~~l~~~~~~~~~~-~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~ 169 (330)
..+.|..-|++-+..-+--+. ..| .|..|.|+=||.|-.++-+++.+.+|++-|+++++++.++.|+..|...
T Consensus 224 k~DfskVYWnsRL~~Eherls-----g~fk~gevv~D~FaGvGPfa~Pa~kK~crV~aNDLNpesik~Lk~ni~lNkv~- 297 (495)
T KOG2078|consen 224 KFDFSKVYWNSRLSHEHERLS-----GLFKPGEVVCDVFAGVGPFALPAAKKGCRVYANDLNPESIKWLKANIKLNKVD- 297 (495)
T ss_pred EEecceEEeeccchhHHHHHh-----hccCCcchhhhhhcCcCccccchhhcCcEEEecCCCHHHHHHHHHhccccccc-
Confidence 345677789954444332222 234 4778999999999999999999999999999999999999999999863
Q ss_pred CCCCeeEEEEecCCC
Q 020158 170 SHQGSVHVRDLNWMN 184 (330)
Q Consensus 170 ~~~~~v~v~~ldW~~ 184 (330)
..++.+..+|-.+
T Consensus 298 --~~~iei~Nmda~~ 310 (495)
T KOG2078|consen 298 --PSAIEIFNMDAKD 310 (495)
T ss_pred --hhheeeecccHHH
Confidence 3447777766443
|
|
| >PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.42 Score=44.61 Aligned_cols=46 Identities=22% Similarity=0.265 Sum_probs=39.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNS 166 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~ 166 (330)
-...+||==|||.|-++.-+|++|..|.+.+.+--| ++..|..+|.
T Consensus 55 ~~~~~VLVPGsGLGRLa~Eia~~G~~~~gnE~S~~M--ll~s~fiLn~ 100 (270)
T PF07942_consen 55 RSKIRVLVPGSGLGRLAWEIAKLGYAVQGNEFSYFM--LLASNFILNH 100 (270)
T ss_pred CCccEEEEcCCCcchHHHHHhhccceEEEEEchHHH--HHHHHHHHcc
Confidence 346799999999999999999999999999998666 5667777775
|
This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions []. |
| >COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.65 Score=45.09 Aligned_cols=60 Identities=20% Similarity=0.098 Sum_probs=45.3
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh----CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV----AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~----~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
..-.|.+|||+.|+.|-=...+|.+ +..|++.|.++.=+..++.|+.+-+. .++.+...|
T Consensus 153 ~p~pge~VlD~cAAPGGKTthla~~~~~~~~iV~A~D~~~~Rl~~l~~nl~RlG~-----~nv~~~~~d 216 (355)
T COG0144 153 DPKPGERVLDLCAAPGGKTTHLAELMENEGAIVVAVDVSPKRLKRLRENLKRLGV-----RNVIVVNKD 216 (355)
T ss_pred CCCCcCEEEEECCCCCCHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHHHHHcCC-----CceEEEecc
Confidence 3456799999999998555555544 35689999999999999999998773 445555554
|
|
| >PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.28 Score=49.99 Aligned_cols=107 Identities=13% Similarity=-0.007 Sum_probs=67.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+..+||+|||.|-.-+.+|+. -..+++.|+....+..+.+.+...+ ..++.+...++......
T Consensus 347 ~~p~~lEIG~G~G~~~~~~A~~~p~~~~iGiE~~~~~~~~~~~~~~~~~-----l~N~~~~~~~~~~~~~~--------- 412 (506)
T PRK01544 347 KRKVFLEIGFGMGEHFINQAKMNPDALFIGVEVYLNGVANVLKLAGEQN-----ITNFLLFPNNLDLILND--------- 412 (506)
T ss_pred CCceEEEECCCchHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHcC-----CCeEEEEcCCHHHHHHh---------
Confidence 4678999999999777777776 4689999999877776666665544 25666655443211000
Q ss_pred cccccccCccchhccCCeeEEE--EeccccCcc------cHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 198 SQERYSWNSSELKEVQRASVLL--AADVIYSDD------LTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIl--aaDviY~~~------~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
+ ...++|-|. -.|.-.-.. ..+.+++.+.++|++| +.++++.-
T Consensus 413 -----------~-~~~sv~~i~i~FPDPWpKkrh~krRl~~~~fl~~~~~~Lk~g--G~i~~~TD 463 (506)
T PRK01544 413 -----------L-PNNSLDGIYILFPDPWIKNKQKKKRIFNKERLKILQDKLKDN--GNLVFASD 463 (506)
T ss_pred -----------c-CcccccEEEEECCCCCCCCCCccccccCHHHHHHHHHhcCCC--CEEEEEcC
Confidence 0 113455444 222221111 5678999999999775 56777543
|
|
| >PRK10742 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.12 Score=47.60 Aligned_cols=46 Identities=13% Similarity=0.126 Sum_probs=42.5
Q ss_pred CCCC--eEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHH
Q 020158 119 FNGI--ISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 119 ~~g~--~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
-.|. +|||+=||+|--|+.+|.+|.+|++.+.++.+..+++.|++.
T Consensus 85 k~g~~p~VLD~TAGlG~Da~~las~G~~V~~vEr~p~vaalL~dgL~r 132 (250)
T PRK10742 85 KGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLAR 132 (250)
T ss_pred CCCCCCEEEECCCCccHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH
Confidence 3455 899999999999999999999999999999999999999987
|
|
| >KOG3045 consensus Predicted RNA methylase involved in rRNA processing [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.41 Score=44.33 Aligned_cols=113 Identities=19% Similarity=0.151 Sum_probs=70.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
....|-|+|||-+-++. ..-..|..-|+. ..+-.|...|..+.+-
T Consensus 180 ~~~vIaD~GCGEakiA~---~~~~kV~SfDL~--------------------a~~~~V~~cDm~~vPl------------ 224 (325)
T KOG3045|consen 180 KNIVIADFGCGEAKIAS---SERHKVHSFDLV--------------------AVNERVIACDMRNVPL------------ 224 (325)
T ss_pred CceEEEecccchhhhhh---ccccceeeeeee--------------------cCCCceeeccccCCcC------------
Confidence 45678999999874433 345678888885 1233444455544311
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeeeCcccccchhhhccccchhhhhhh
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIM 279 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R~~f~~~~~d~v~~~y~~f~~~l~ 279 (330)
..++.|+++.+=.+. -..+..|+....++|+++ +.+||| +.++.|+- -..|.+.|.
T Consensus 225 -----------~d~svDvaV~CLSLM-gtn~~df~kEa~RiLk~g--G~l~IA-Ev~SRf~d---------v~~f~r~l~ 280 (325)
T KOG3045|consen 225 -----------EDESVDVAVFCLSLM-GTNLADFIKEANRILKPG--GLLYIA-EVKSRFSD---------VKGFVRALT 280 (325)
T ss_pred -----------ccCcccEEEeeHhhh-cccHHHHHHHHHHHhccC--ceEEEE-ehhhhccc---------HHHHHHHHH
Confidence 235799988776665 446677889999999775 678887 44444421 123555554
Q ss_pred hhhcccccccccCCCeeeEEecCC
Q 020158 280 EEGEHRRFERESFPAFVGKCIDLN 303 (330)
Q Consensus 280 ~~~~~~~~~~~~~~~f~v~~i~~~ 303 (330)
..||.++..++.
T Consensus 281 ------------~lGF~~~~~d~~ 292 (325)
T KOG3045|consen 281 ------------KLGFDVKHKDVS 292 (325)
T ss_pred ------------HcCCeeeehhhh
Confidence 236777777665
|
|
| >COG2384 Predicted SAM-dependent methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.22 Score=44.90 Aligned_cols=60 Identities=20% Similarity=0.163 Sum_probs=51.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
++.++.|+||--|.+.+.+-+. +..+++.|+++.-++.+.+|+..|.. ..++.++..|=.
T Consensus 16 ~~~~iaDIGsDHAYLp~~Lv~~~~~~~~va~eV~~gpl~~a~~~v~~~~l----~~~i~vr~~dgl 77 (226)
T COG2384 16 QGARIADIGSDHAYLPIYLVKNNPASTAVAGEVVPGPLESAIRNVKKNNL----SERIDVRLGDGL 77 (226)
T ss_pred cCCceeeccCchhHhHHHHHhcCCcceEEEeecccCHHHHHHHHHHhcCC----cceEEEeccCCc
Confidence 4566999999999999988887 57999999999999999999999886 578888888743
|
|
| >PF12147 Methyltransf_20: Putative methyltransferase; InterPro: IPR022744 This C-terminal region is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.98 Score=42.55 Aligned_cols=107 Identities=10% Similarity=0.049 Sum_probs=72.5
Q ss_pred CCCeEEEEcCccCHHHHH-HHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 120 NGIISLELGAGTGLAGIL-LSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~-lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
+..+|||+-||.|-.=+- +... ..+|.+.|+++..++.-+.-++.++. ...+++...|-.+...-
T Consensus 135 ~pvrIlDIAaG~GRYvlDal~~~~~~~~~i~LrDys~~Nv~~g~~li~~~gL----~~i~~f~~~dAfd~~~l------- 203 (311)
T PF12147_consen 135 RPVRILDIAAGHGRYVLDALEKHPERPDSILLRDYSPINVEKGRALIAERGL----EDIARFEQGDAFDRDSL------- 203 (311)
T ss_pred CceEEEEeccCCcHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHHHHHcCC----ccceEEEecCCCCHhHh-------
Confidence 457999999999943222 2222 26899999999999999999998885 45568888886553110
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCccc---HHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDL---TDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~---~~~l~~tl~~lL~~~~~~~i~v 251 (330)
......++++|.|-++-...+ +...++-+..++.++ +..||.
T Consensus 204 -------------~~l~p~P~l~iVsGL~ElF~Dn~lv~~sl~gl~~al~pg-G~lIyT 248 (311)
T PF12147_consen 204 -------------AALDPAPTLAIVSGLYELFPDNDLVRRSLAGLARALEPG-GYLIYT 248 (311)
T ss_pred -------------hccCCCCCEEEEecchhhCCcHHHHHHHHHHHHHHhCCC-cEEEEc
Confidence 112346899999988755443 555666677777665 344444
|
It is found in association with PF00561 from PFAM. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. This domain belongs to the S-adenosyl-L-methionine-dependent methyltransferases superfamily. |
| >PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases | Back alignment and domain information |
|---|
Probab=93.94 E-value=1 Score=40.42 Aligned_cols=131 Identities=15% Similarity=0.161 Sum_probs=67.3
Q ss_pred eechHH--HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCee
Q 020158 98 VWKAEL--VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSV 175 (330)
Q Consensus 98 vW~aa~--~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v 175 (330)
.||--. ...+||.. .-++..|-|+|||-+.++-.+. .+.+|..-|+-. .+-
T Consensus 54 ~WP~nPvd~iI~~l~~------~~~~~viaD~GCGdA~la~~~~-~~~~V~SfDLva--------------------~n~ 106 (219)
T PF05148_consen 54 KWPVNPVDVIIEWLKK------RPKSLVIADFGCGDAKLAKAVP-NKHKVHSFDLVA--------------------PNP 106 (219)
T ss_dssp TSSS-HHHHHHHHHCT------S-TTS-EEEES-TT-HHHHH---S---EEEEESS---------------------SST
T ss_pred cCCCCcHHHHHHHHHh------cCCCEEEEECCCchHHHHHhcc-cCceEEEeeccC--------------------CCC
Confidence 576644 34455543 2345789999999998774332 345799999852 112
Q ss_pred EEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 176 HVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 176 ~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
.|...|..+.+- ..+..|++|.+=.+-- ..+..++....++|+++ +.+++| |.
T Consensus 107 ~Vtacdia~vPL-----------------------~~~svDv~VfcLSLMG-Tn~~~fi~EA~RvLK~~--G~L~IA-EV 159 (219)
T PF05148_consen 107 RVTACDIANVPL-----------------------EDESVDVAVFCLSLMG-TNWPDFIREANRVLKPG--GILKIA-EV 159 (219)
T ss_dssp TEEES-TTS-S-------------------------TT-EEEEEEES---S-S-HHHHHHHHHHHEEEE--EEEEEE-EE
T ss_pred CEEEecCccCcC-----------------------CCCceeEEEEEhhhhC-CCcHHHHHHHHheeccC--cEEEEE-Ee
Confidence 244455443311 2357999998877764 45667888889999765 566665 45
Q ss_pred eCcccccchhhhccccchhhhhhhhhhcccccccccCCCeeeEEecCC
Q 020158 256 RYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPAFVGKCIDLN 303 (330)
Q Consensus 256 R~~f~~~~~d~v~~~y~~f~~~l~~~~~~~~~~~~~~~~f~v~~i~~~ 303 (330)
++.|+ ....|...+. .-||.+..-+.+
T Consensus 160 ~SRf~---------~~~~F~~~~~------------~~GF~~~~~d~~ 186 (219)
T PF05148_consen 160 KSRFE---------NVKQFIKALK------------KLGFKLKSKDES 186 (219)
T ss_dssp GGG-S----------HHHHHHHHH------------CTTEEEEEEE--
T ss_pred cccCc---------CHHHHHHHHH------------HCCCeEEecccC
Confidence 54443 1345555554 237777776654
|
; GO: 0008168 methyltransferase activity; PDB: 2ZFU_B. |
| >COG1255 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.36 Score=39.06 Aligned_cols=90 Identities=19% Similarity=0.177 Sum_probs=61.2
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccC-HHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTG-LAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtG-L~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
+++|+.... -+ .+|+|+|.|-= -++-.++++|..|++||+++. +. ...+.+..-|-.
T Consensus 4 ~a~~iAre~-----~~-gkVvEVGiG~~~~VA~~L~e~g~dv~atDI~~~-----------~a-----~~g~~~v~DDit 61 (129)
T COG1255 4 VAEYIAREN-----AR-GKVVEVGIGFFLDVAKRLAERGFDVLATDINEK-----------TA-----PEGLRFVVDDIT 61 (129)
T ss_pred HHHHHHHHh-----cC-CcEEEEccchHHHHHHHHHHcCCcEEEEecccc-----------cC-----cccceEEEccCC
Confidence 566766431 23 49999998864 566677788999999999854 11 233444444544
Q ss_pred CCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 184 NPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
++ ...+--++|.+|.....+.+.+.+-++.+.-
T Consensus 62 nP----------------------------~~~iY~~A~lIYSiRpppEl~~~ildva~aV 94 (129)
T COG1255 62 NP----------------------------NISIYEGADLIYSIRPPPELQSAILDVAKAV 94 (129)
T ss_pred Cc----------------------------cHHHhhCccceeecCCCHHHHHHHHHHHHhh
Confidence 43 2345567899999888888888888887654
|
|
| >COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=93.81 E-value=2.9 Score=37.42 Aligned_cols=166 Identities=16% Similarity=0.221 Sum_probs=94.9
Q ss_pred CeEeech--HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-C-CeEEEEeCchHHHHHHHHHHHHccCCCC
Q 020158 95 GLQVWKA--ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-A-WTVFLTDHGNYILDNCAKNVQLNSGVFS 170 (330)
Q Consensus 95 G~~vW~a--a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~ 170 (330)
-.++|+. |.+-|..| .-..+-..-.|.+||=|||-+|.+--..+-- + ..|++...++.+..-+-.-+..
T Consensus 50 eYR~Wnp~RSKLaAaIl-~Gl~~~pi~~g~~VLYLGAasGTTvSHVSDIv~~G~iYaVEfs~R~~reLl~~a~~------ 122 (231)
T COG1889 50 EYREWNPRRSKLAAAIL-KGLKNFPIKEGSKVLYLGAASGTTVSHVSDIVGEGRIYAVEFSPRPMRELLDVAEK------ 122 (231)
T ss_pred ceeeeCcchhHHHHHHH-cCcccCCcCCCCEEEEeeccCCCcHhHHHhccCCCcEEEEEecchhHHHHHHHHHh------
Confidence 4799987 44444443 3221124457899999999999665555544 4 5799999998655333322221
Q ss_pred CCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCe-eEEEEeccccC----cccHHHHHHHHHHhccCCC
Q 020158 171 HQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRA-SVLLAADVIYS----DDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 171 ~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~-DlIlaaDviY~----~~~~~~l~~tl~~lL~~~~ 245 (330)
..++--.--|-..+ ++| -+|=.-||+|. ++..+-+......+|+++
T Consensus 123 -R~Ni~PIL~DA~~P---------------------------~~Y~~~Ve~VDviy~DVAQp~Qa~I~~~Na~~FLk~~- 173 (231)
T COG1889 123 -RPNIIPILEDARKP---------------------------EKYRHLVEKVDVIYQDVAQPNQAEILADNAEFFLKKG- 173 (231)
T ss_pred -CCCceeeecccCCc---------------------------HHhhhhcccccEEEEecCCchHHHHHHHHHHHhcccC-
Confidence 12222222222221 111 22223455554 567888889999999776
Q ss_pred CeEEEEEeeeeCcccccchhhhccccchhhhhhhhhhcccccccccCCCe-eeEEecCCCcCcccccccCCCceE
Q 020158 246 KKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPAF-VGKCIDLNEFPQYVREYDRGNDVE 319 (330)
Q Consensus 246 ~~~i~va~~~R~~f~~~~~d~v~~~y~~f~~~l~~~~~~~~~~~~~~~~f-~v~~i~~~~~p~~~~~yer~~~l~ 319 (330)
+.++++.+-|+- |+.++.-.-|..-+.... ..+| ..+.+++. +||+.-.+.
T Consensus 174 -G~~~i~iKArSI------dvT~dp~~vf~~ev~kL~---------~~~f~i~e~~~Le-------Pye~DH~~i 225 (231)
T COG1889 174 -GYVVIAIKARSI------DVTADPEEVFKDEVEKLE---------EGGFEILEVVDLE-------PYEKDHALI 225 (231)
T ss_pred -CeEEEEEEeecc------cccCCHHHHHHHHHHHHH---------hcCceeeEEeccC-------CcccceEEE
Confidence 446667777763 555555566776665332 2234 34556654 688764443
|
|
| >TIGR03439 methyl_EasF probable methyltransferase domain, EasF family | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.91 Score=43.47 Aligned_cols=111 Identities=17% Similarity=0.237 Sum_probs=65.4
Q ss_pred CCCeEEEEcCccCH-HHHHHHHh-----CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE--EEecCCCCCCCCcc
Q 020158 120 NGIISLELGAGTGL-AGILLSRV-----AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV--RDLNWMNPWPPIFS 191 (330)
Q Consensus 120 ~g~~VLELG~GtGL-~gl~lA~~-----~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v--~~ldW~~~~~~~~~ 191 (330)
.+..++|||||.|- +.+.+..+ ..+.+..|++.++|+.+..++..-. ...+.+ ...|+.+..
T Consensus 76 ~~~~lIELGsG~~~Kt~~LL~aL~~~~~~~~Y~plDIS~~~L~~a~~~L~~~~-----~p~l~v~~l~gdy~~~l----- 145 (319)
T TIGR03439 76 SGSMLVELGSGNLRKVGILLEALERQKKSVDYYALDVSRSELQRTLAELPLGN-----FSHVRCAGLLGTYDDGL----- 145 (319)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHhhhhcc-----CCCeEEEEEEecHHHHH-----
Confidence 45689999999984 55555443 3579999999999999998887222 234554 334443321
Q ss_pred CCCCCccccccccCccchhccCCeeEEEEec-cccC--cccHHHHHHHHHH-hccCCCCeEEEEEee
Q 020158 192 LGNSSASQERYSWNSSELKEVQRASVLLAAD-VIYS--DDLTDALFHTLKR-LMPLGSKKVLYLALE 254 (330)
Q Consensus 192 ~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaD-viY~--~~~~~~l~~tl~~-lL~~~~~~~i~va~~ 254 (330)
.|-... .......+|+--- .|-+ +.....|++.+.+ .|.++ ..+++..-
T Consensus 146 -----------~~l~~~-~~~~~~r~~~flGSsiGNf~~~ea~~fL~~~~~~~l~~~--d~lLiG~D 198 (319)
T TIGR03439 146 -----------AWLKRP-ENRSRPTTILWLGSSIGNFSRPEAAAFLAGFLATALSPS--DSFLIGLD 198 (319)
T ss_pred -----------hhcccc-cccCCccEEEEeCccccCCCHHHHHHHHHHHHHhhCCCC--CEEEEecC
Confidence 110000 0012345554332 4433 4456678888888 88654 45666543
|
This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781). |
| >PF02005 TRM: N2,N2-dimethylguanosine tRNA methyltransferase; InterPro: IPR002905 This enzyme 2 | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.16 Score=49.68 Aligned_cols=102 Identities=17% Similarity=0.128 Sum_probs=64.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.+.+|||.=||+|+=||-.++- ..+|++-|+++++++.+++|+++|+... ..+.+...|-....
T Consensus 49 ~~~~~lDalaasGvR~iRy~~E~~~~~~v~~NDi~~~a~~~i~~N~~~N~~~~---~~~~v~~~DAn~ll---------- 115 (377)
T PF02005_consen 49 GPIRVLDALAASGVRGIRYAKELAGVDKVTANDISPEAVELIKRNLELNGLED---ERIEVSNMDANVLL---------- 115 (377)
T ss_dssp S-EEEEETT-TTSHHHHHHHHH-SSECEEEEEES-HHHHHHHHHHHHHCT-SG---CCEEEEES-HHHHH----------
T ss_pred CCceEEeccccccHHHHHHHHHcCCCCEEEEecCCHHHHHHHHHhHhhccccC---ceEEEehhhHHHHh----------
Confidence 4469999999999999999987 3799999999999999999999998631 14666554422110
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
. .....||+|=- |. -...-+|++..-+.++.+ +.+++.
T Consensus 116 ------~------~~~~~fD~IDl-DP---fGSp~pfldsA~~~v~~g--Gll~vT 153 (377)
T PF02005_consen 116 ------Y------SRQERFDVIDL-DP---FGSPAPFLDSALQAVKDG--GLLCVT 153 (377)
T ss_dssp ------C------HSTT-EEEEEE------SS--HHHHHHHHHHEEEE--EEEEEE
T ss_pred ------h------hccccCCEEEe-CC---CCCccHhHHHHHHHhhcC--CEEEEe
Confidence 0 12356887631 11 234557777777777553 555554
|
1.1.32 from EC uses S-adenosyl-L-methionine to methylate tRNA: |
| >KOG1975 consensus mRNA cap methyltransferase [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.32 Score=46.36 Aligned_cols=128 Identities=11% Similarity=0.108 Sum_probs=72.9
Q ss_pred echHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCC-CCCeeE
Q 020158 99 WKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFS-HQGSVH 176 (330)
Q Consensus 99 W~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~-~~~~v~ 176 (330)
|=-+.+.-.|. -++..+++||||-|-=-+-.-+.| ..++++|+.+-.++.|+.....-..... ..=.+.
T Consensus 105 wIKs~LI~~y~---------~~~~~~~~LgCGKGGDLlKw~kAgI~~~igiDIAevSI~qa~~RYrdm~~r~~~~~f~a~ 175 (389)
T KOG1975|consen 105 WIKSVLINLYT---------KRGDDVLDLGCGKGGDLLKWDKAGIGEYIGIDIAEVSINQARKRYRDMKNRFKKFIFTAV 175 (389)
T ss_pred HHHHHHHHHHh---------ccccccceeccCCcccHhHhhhhcccceEeeehhhccHHHHHHHHHHHHhhhhcccceeE
Confidence 54555555554 356789999999984434333333 6899999999889988866543211100 001233
Q ss_pred EEEecCCCCCCCCccCCCCCccccccccCccchhccC-CeeEEEEeccccC----cccHHHHHHHHHHhccCCCCeEEEE
Q 020158 177 VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQ-RASVLLAADVIYS----DDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 177 v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~DlIlaaDviY~----~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
+...|=.... .. +.++..+ +||+|=+-=++++ .+..+-+++.+.++|++| ++++-
T Consensus 176 f~~~Dc~~~~-----------l~-------d~~e~~dp~fDivScQF~~HYaFetee~ar~~l~Nva~~LkpG--G~FIg 235 (389)
T KOG1975|consen 176 FIAADCFKER-----------LM-------DLLEFKDPRFDIVSCQFAFHYAFETEESARIALRNVAKCLKPG--GVFIG 235 (389)
T ss_pred EEEeccchhH-----------HH-------HhccCCCCCcceeeeeeeEeeeeccHHHHHHHHHHHHhhcCCC--cEEEE
Confidence 3333321110 00 0011122 3999988777766 346677888888999775 45555
Q ss_pred Eeee
Q 020158 252 ALEK 255 (330)
Q Consensus 252 a~~~ 255 (330)
..+.
T Consensus 236 TiPd 239 (389)
T KOG1975|consen 236 TIPD 239 (389)
T ss_pred ecCc
Confidence 4433
|
|
| >COG3129 Predicted SAM-dependent methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.17 Score=46.05 Aligned_cols=100 Identities=17% Similarity=0.251 Sum_probs=59.9
Q ss_pred HHHHHHhhhcCCCCCC--CCCeEEEEcCccCHHHHH--HHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 104 VLADFVMHKMCTSSDF--NGIISLELGAGTGLAGIL--LSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~--~g~~VLELG~GtGL~gl~--lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
.||+.|.+.. ... ++.++||+|-|.-..=-+ .-..|.+.++||+++..+..++.|+..|..+ ...++.+.
T Consensus 63 ~laDLL~s~~---g~~~~~~i~~LDIGvGAnCIYPliG~~eYgwrfvGseid~~sl~sA~~ii~~N~~l---~~~I~lr~ 136 (292)
T COG3129 63 HLADLLASTS---GQIPGKNIRILDIGVGANCIYPLIGVHEYGWRFVGSEIDSQSLSSAKAIISANPGL---ERAIRLRR 136 (292)
T ss_pred HHHHHHHhcC---CCCCcCceEEEeeccCcccccccccceeecceeecCccCHHHHHHHHHHHHcCcch---hhheeEEe
Confidence 4566555442 223 456788998775422111 2233889999999999999999999999533 34444432
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD 227 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~ 227 (330)
-. ..... +.+ -+...+.||..+|.-.+|..
T Consensus 137 qk---~~~~i-f~g--------------iig~nE~yd~tlCNPPFh~s 166 (292)
T COG3129 137 QK---DSDAI-FNG--------------IIGKNERYDATLCNPPFHDS 166 (292)
T ss_pred cc---Ccccc-ccc--------------cccccceeeeEecCCCcchh
Confidence 21 11000 000 01124689999999888753
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.14 Score=48.66 Aligned_cols=42 Identities=36% Similarity=0.357 Sum_probs=37.6
Q ss_pred CCCCeEEEEcCcc-CHHHHHHHHh--CCeEEEEeCchHHHHHHHH
Q 020158 119 FNGIISLELGAGT-GLAGILLSRV--AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 119 ~~g~~VLELG~Gt-GL~gl~lA~~--~~~V~~TD~~~~~L~~~~~ 160 (330)
-.|.+||=+|||. ||+.+.+|+. +.+|++||+.+.-|+.+++
T Consensus 168 k~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~ 212 (354)
T KOG0024|consen 168 KKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKK 212 (354)
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH
Confidence 4688999999996 9999998887 5799999999999999987
|
|
| >PF01728 FtsJ: FtsJ-like methyltransferase; InterPro: IPR002877 RrmJ (FtsJ) is a well conserved heat shock protein present in prokaryotes, archaea, and eukaryotes | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.18 Score=43.72 Aligned_cols=50 Identities=26% Similarity=0.274 Sum_probs=38.4
Q ss_pred chHHHHHHHHhhhcCCCCCC---CCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchH
Q 020158 100 KAELVLADFVMHKMCTSSDF---NGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNY 153 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~---~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~ 153 (330)
+|+.-|.+-+... ..+ ++.+||||||++|-.+-++..++ .+|++.|+.+.
T Consensus 4 Ra~~KL~ei~~~~----~~~~~~~~~~vlDlG~aPGGws~~~~~~~~~~~~v~avDl~~~ 59 (181)
T PF01728_consen 4 RAAFKLYEIDEKF----KIFKPGKGFTVLDLGAAPGGWSQVLLQRGGPAGRVVAVDLGPM 59 (181)
T ss_dssp THHHHHHHHHHTT----SSS-TTTTEEEEEET-TTSHHHHHHHTSTTTEEEEEEEESSST
T ss_pred HHHHHHHHHHHHC----CCCCcccccEEEEcCCcccceeeeeeecccccceEEEEecccc
Confidence 5677777766554 223 45899999999999998888886 79999999854
|
RrmJ is responsible for methylating 23 S rRNA at position U2552 in the aminoacyl (A)1-site of the ribosome []. U2552 is one of the five universally conserved A-loop residues and has been shown to be methylated at the ribose 2'-OH group in the majority of organisms investigated so far. This suggests that this modification plays an important role in the A-loop function. RrmJ recognises its methylation target only when the 23 S rRNA is present in 50 S ribosomal subunits. This suggests that the RrmJ-mediated methylation must occur late in the maturation process of the ribosome. This is in contrast to other known 23 S rRNA modifications that occur in earlier maturation steps. The 1.5 A crystal structure of RrmJ in complex with its cofactor S-adenosylmethionine revealed that RrmJ has a methyltransferase fold. The active site of RrmJ appears to be formed by a catalytic triad consisting of two lysine residues and the negatively charged aspartate residue. Another highly conserved glutamate residue that is present in the active site of RrmJ appears to play only a minor role in the methyltransfer reaction in vivo []. ; GO: 0003676 nucleic acid binding, 0008168 methyltransferase activity, 0032259 methylation; PDB: 3GCZ_A 2PLW_A 2NYU_A 2OXT_C 3EMD_A 3ELY_A 3ELW_A 3ELU_A 3ELD_A 3EMB_A .... |
| >PF11968 DUF3321: Putative methyltransferase (DUF3321); InterPro: IPR021867 This family is conserved in fungi and is annotated as being a nucleolar protein | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.8 Score=41.27 Aligned_cols=105 Identities=12% Similarity=0.085 Sum_probs=66.9
Q ss_pred chHHHHHHHHhhhcCCCCC-CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 100 KAELVLADFVMHKMCTSSD-FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~-~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
+++.+|.+||......+.. -...++||+||=..-..+ +..+ ..|+..|+++ ..-.+
T Consensus 30 dSSK~lv~wL~~~~~~~~~~~~~lrlLEVGals~~N~~--s~~~~fdvt~IDLns--------------------~~~~I 87 (219)
T PF11968_consen 30 DSSKWLVEWLKELGVRPKNGRPKLRLLEVGALSTDNAC--STSGWFDVTRIDLNS--------------------QHPGI 87 (219)
T ss_pred chhHHHHHHhhhhccccccccccceEEeecccCCCCcc--cccCceeeEEeecCC--------------------CCCCc
Confidence 4899999999876421111 123699999986332221 1222 4699999972 44566
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccH---HHHHHHHHHhccCCCC
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLT---DALFHTLKRLMPLGSK 246 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~---~~l~~tl~~lL~~~~~ 246 (330)
.+-||.+.+-+. .+.++||+|.+|=|+-+.... -..++-..++|++++.
T Consensus 88 ~qqDFm~rplp~--------------------~~~e~FdvIs~SLVLNfVP~p~~RG~Ml~r~~~fL~~~g~ 139 (219)
T PF11968_consen 88 LQQDFMERPLPK--------------------NESEKFDVISLSLVLNFVPDPKQRGEMLRRAHKFLKPPGL 139 (219)
T ss_pred eeeccccCCCCC--------------------CcccceeEEEEEEEEeeCCCHHHHHHHHHHHHHHhCCCCc
Confidence 778887753221 124689999999999664433 3466777778877654
|
|
| >PF07091 FmrO: Ribosomal RNA methyltransferase (FmrO); PDB: 3LCU_A 3LCV_B 3FRH_A 3FRI_A 3B89_A 3FZG_A | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.64 Score=42.78 Aligned_cols=135 Identities=9% Similarity=0.021 Sum_probs=72.7
Q ss_pred CCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
..+|+|||||.==.++..... +.++++.|++..+++.+.+=+..-+ ....+...|-....
T Consensus 106 p~sVlDigCGlNPlalp~~~~~~~a~Y~a~DID~~~ve~l~~~l~~l~------~~~~~~v~Dl~~~~------------ 167 (251)
T PF07091_consen 106 PDSVLDIGCGLNPLALPWMPEAPGATYIAYDIDSQLVEFLNAFLAVLG------VPHDARVRDLLSDP------------ 167 (251)
T ss_dssp -SEEEEET-TTCHHHHHTTTSSTT-EEEEEESBHHHHHHHHHHHHHTT-------CEEEEEE-TTTSH------------
T ss_pred CchhhhhhccCCceehhhcccCCCcEEEEEeCCHHHHHHHHHHHHhhC------CCcceeEeeeeccC------------
Confidence 579999999977555544444 4699999999999999987766544 23344444433321
Q ss_pred ccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCCCeEEEEEeeeeCcccccchhhhccccchhhh
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRS 276 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~~~~i~va~~~R~~f~~~~~d~v~~~y~~f~~ 276 (330)
.....|+.+.-=++.--+. -...++.|..+ ....++|+++.|+-. .+. ..++..|+.
T Consensus 168 ------------~~~~~DlaLllK~lp~le~q~~g~g~~ll~~~----~~~~~vVSfPtrSL~---gR~--~gm~~~y~~ 226 (251)
T PF07091_consen 168 ------------PKEPADLALLLKTLPCLERQRRGAGLELLDAL----RSPHVVVSFPTRSLG---GRN--KGMEQTYSA 226 (251)
T ss_dssp ------------TTSEESEEEEET-HHHHHHHSTTHHHHHHHHS----CESEEEEEEES------------TTHHHCHHH
T ss_pred ------------CCCCcchhhHHHHHHHHHHHhcchHHHHHHHh----CCCeEEEeccccccc---cCc--cccccCHHH
Confidence 1246788886544422111 11223333333 235688898888532 221 123566777
Q ss_pred hhhhhhcccccccccCCCeeeEEecC
Q 020158 277 YIMEEGEHRRFERESFPAFVGKCIDL 302 (330)
Q Consensus 277 ~l~~~~~~~~~~~~~~~~f~v~~i~~ 302 (330)
++.... ...+|.++++..
T Consensus 227 ~fe~~~--------~~~~~~~~~~~~ 244 (251)
T PF07091_consen 227 WFEALA--------AERGWIVDRLTF 244 (251)
T ss_dssp HHHHHC--------CTTCEEEEEEEE
T ss_pred HHHHhc--------ccCCceeeeeec
Confidence 776432 135677777653
|
|
| >PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases | Back alignment and domain information |
|---|
Probab=92.47 E-value=0.2 Score=50.22 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=75.6
Q ss_pred CCCcCeEeechHHHHHHHHhhhcCCCCCCCC---CeEEEEcCccCHHHHHHHHhCCeEEEE---eCchHHHHHHHHH-HH
Q 020158 91 IPSVGLQVWKAELVLADFVMHKMCTSSDFNG---IISLELGAGTGLAGILLSRVAWTVFLT---DHGNYILDNCAKN-VQ 163 (330)
Q Consensus 91 ~~~~G~~vW~aa~~La~~l~~~~~~~~~~~g---~~VLELG~GtGL~gl~lA~~~~~V~~T---D~~~~~L~~~~~N-v~ 163 (330)
.++.|.+...++....+.|.+-. +....+ +.+||+|||+|..|..+..++-.++.+ |.++..++.+.+. +-
T Consensus 87 FPgggt~F~~Ga~~Yid~i~~~~--~~~~~~g~iR~~LDvGcG~aSF~a~l~~r~V~t~s~a~~d~~~~qvqfaleRGvp 164 (506)
T PF03141_consen 87 FPGGGTMFPHGADHYIDQIAEMI--PLIKWGGGIRTALDVGCGVASFGAYLLERNVTTMSFAPNDEHEAQVQFALERGVP 164 (506)
T ss_pred eCCCCccccCCHHHHHHHHHHHh--hccccCCceEEEEeccceeehhHHHHhhCCceEEEcccccCCchhhhhhhhcCcc
Confidence 35678888889888888877654 221232 478999999999998888876544443 3333223322211 10
Q ss_pred HccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC-cccHHHHHHHHHHhcc
Q 020158 164 LNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS-DDLTDALFHTLKRLMP 242 (330)
Q Consensus 164 ~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~-~~~~~~l~~tl~~lL~ 242 (330)
.- .+.+-.+.|.+ ....||+|=|+.|+-. ...-..++-.+.++|+
T Consensus 165 a~------~~~~~s~rLPf----------------------------p~~~fDmvHcsrc~i~W~~~~g~~l~evdRvLR 210 (506)
T PF03141_consen 165 AM------IGVLGSQRLPF----------------------------PSNAFDMVHCSRCLIPWHPNDGFLLFEVDRVLR 210 (506)
T ss_pred hh------hhhhccccccC----------------------------Cccchhhhhcccccccchhcccceeehhhhhhc
Confidence 00 01111122221 1247899988888854 2222457778889998
Q ss_pred CCCCeEEEEEeeeeC
Q 020158 243 LGSKKVLYLALEKRY 257 (330)
Q Consensus 243 ~~~~~~i~va~~~R~ 257 (330)
+| +.++++.+.-+
T Consensus 211 pG--Gyfv~S~ppv~ 223 (506)
T PF03141_consen 211 PG--GYFVLSGPPVY 223 (506)
T ss_pred cC--ceEEecCCccc
Confidence 75 56777665544
|
; GO: 0008168 methyltransferase activity |
| >KOG2915 consensus tRNA(1-methyladenosine) methyltransferase, subunit GCD14 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=92.43 E-value=2.1 Score=40.03 Aligned_cols=63 Identities=14% Similarity=0.154 Sum_probs=48.7
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
+...|.+|||-|.|.|-.|.++|+.- .+++--|++..-.+.+.+-.+..+. .+++.+..-|--
T Consensus 102 ~i~PGsvV~EsGTGSGSlShaiaraV~ptGhl~tfefH~~Ra~ka~eeFr~hgi----~~~vt~~hrDVc 167 (314)
T KOG2915|consen 102 EIRPGSVVLESGTGSGSLSHAIARAVAPTGHLYTFEFHETRAEKALEEFREHGI----GDNVTVTHRDVC 167 (314)
T ss_pred cCCCCCEEEecCCCcchHHHHHHHhhCcCcceEEEEecHHHHHHHHHHHHHhCC----CcceEEEEeecc
Confidence 45679999999999999999999872 5899999997777777777776663 466666655543
|
|
| >PF03686 UPF0146: Uncharacterised protein family (UPF0146); InterPro: IPR005353 The function of this family of proteins is unknown | Back alignment and domain information |
|---|
Probab=92.07 E-value=0.5 Score=38.96 Aligned_cols=44 Identities=20% Similarity=0.163 Sum_probs=31.1
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCcc-CHHHHHHHHhCCeEEEEeCchH
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGT-GLAGILLSRVAWTVFLTDHGNY 153 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~Gt-GL~gl~lA~~~~~V~~TD~~~~ 153 (330)
.+|+|+..+. +..+|+|+|-|- --++..++..|..|++||+++.
T Consensus 3 ~~a~~ia~~~------~~~kiVEVGiG~~~~vA~~L~~~G~dV~~tDi~~~ 47 (127)
T PF03686_consen 3 DFAEYIARLN------NYGKIVEVGIGFNPEVAKKLKERGFDVIATDINPR 47 (127)
T ss_dssp HHHHHHHHHS-------SSEEEEET-TT--HHHHHHHHHS-EEEEE-SS-S
T ss_pred hHHHHHHHhC------CCCcEEEECcCCCHHHHHHHHHcCCcEEEEECccc
Confidence 5789988652 334999999996 4677788888999999999965
|
; PDB: 2K4M_A. |
| >COG1867 TRM1 N2,N2-dimethylguanosine tRNA methyltransferase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=91.58 E-value=0.32 Score=47.03 Aligned_cols=46 Identities=28% Similarity=0.273 Sum_probs=42.5
Q ss_pred CCeEEEEcCccCHHHHHHHHh-CC-eEEEEeCchHHHHHHHHHHHHcc
Q 020158 121 GIISLELGAGTGLAGILLSRV-AW-TVFLTDHGNYILDNCAKNVQLNS 166 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~-~~-~V~~TD~~~~~L~~~~~Nv~~N~ 166 (330)
.++|+|-=||||+=||-.|.- +. +|++-|++|++.+.++.|+.+|.
T Consensus 53 ~~~v~DalsatGiRgIRya~E~~~~~v~lNDisp~Avelik~Nv~~N~ 100 (380)
T COG1867 53 PKRVLDALSATGIRGIRYAVETGVVKVVLNDISPKAVELIKENVRLNS 100 (380)
T ss_pred CeEEeecccccchhHhhhhhhcCccEEEEccCCHHHHHHHHHHHHhcC
Confidence 789999999999999999987 34 89999999999999999999994
|
|
| >KOG2730 consensus Methylase [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.31 E-value=0.36 Score=43.60 Aligned_cols=74 Identities=12% Similarity=0.062 Sum_probs=61.5
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
+..+|..+... +..-.|+|.=||.|--.+..|..+..|++.|++|.-+..++.|++.-+. ..++.+...|
T Consensus 82 a~~iA~~v~~~------~~~~~iidaf~g~gGntiqfa~~~~~VisIdiDPikIa~AkhNaeiYGI----~~rItFI~GD 151 (263)
T KOG2730|consen 82 AEHIANRVVAC------MNAEVIVDAFCGVGGNTIQFALQGPYVIAIDIDPVKIACARHNAEVYGV----PDRITFICGD 151 (263)
T ss_pred HHHHHHHHHHh------cCcchhhhhhhcCCchHHHHHHhCCeEEEEeccHHHHHHHhccceeecC----CceeEEEech
Confidence 45555555433 2556899999999988999999999999999999999999999999886 5699999999
Q ss_pred CCCC
Q 020158 182 WMNP 185 (330)
Q Consensus 182 W~~~ 185 (330)
|.+.
T Consensus 152 ~ld~ 155 (263)
T KOG2730|consen 152 FLDL 155 (263)
T ss_pred HHHH
Confidence 9875
|
|
| >PF11599 AviRa: RRNA methyltransferase AviRa; InterPro: IPR024268 This family of proteins includes the methyltransferase AviRa from Streptomyces viridochromogenes | Back alignment and domain information |
|---|
Probab=90.89 E-value=0.46 Score=42.82 Aligned_cols=70 Identities=16% Similarity=0.096 Sum_probs=40.8
Q ss_pred CCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-C---CeEEEEeCchHHHHHHHHHHHHc
Q 020158 92 PSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-A---WTVFLTDHGNYILDNCAKNVQLN 165 (330)
Q Consensus 92 ~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~---~~V~~TD~~~~~L~~~~~Nv~~N 165 (330)
+..++.|--|+.++.+-+... ..-.+.++-|=.||.|.+--+++.+ + ..|+++|+++++|+.+++|+.+-
T Consensus 27 G~p~FPVRLAsEi~qR~l~~l----~~~~p~tLyDPCCG~gyLLTVlGLLh~~~l~~v~aSDId~~aL~lA~kNL~LL 100 (246)
T PF11599_consen 27 GFPAFPVRLASEIFQRALHYL----EGKGPYTLYDPCCGSGYLLTVLGLLHRRRLRRVYASDIDEDALELARKNLSLL 100 (246)
T ss_dssp TB----HHHHHHHHHHHHCTS----SS-S-EEEEETT-TTSHHHHHHHHHTGGGEEEEEEEES-HHHHHHHHHHHHCC
T ss_pred CCCCccHHHHHHHHHHHHHhh----cCCCCeeeeccCCCccHHHHHHHHhhhHHHHhHhcccCCHHHHHHHHHhhhhc
Confidence 344555544444444433211 1123468999999999444444433 2 58999999999999999999764
|
This protein mediates the resistance to the antibiotic avilamycin. AviRa methylates a specific guanine base within the peptidyl-transferase loop of the 23S ribosomal RNA [].; PDB: 1O9H_A 1O9G_A. |
| >COG5459 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=90.86 E-value=0.23 Score=47.84 Aligned_cols=101 Identities=16% Similarity=0.227 Sum_probs=57.9
Q ss_pred CCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccC
Q 020158 116 SSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSL 192 (330)
Q Consensus 116 ~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~ 192 (330)
.++|..++|||.|+|.|....++-.. -.++++...++ .|..+-..+..|. .....||....-..
T Consensus 109 ~~dfapqsiLDvG~GPgtgl~A~n~i~Pdl~sa~ile~sp-~lrkV~~tl~~nv---------~t~~td~r~s~vt~--- 175 (484)
T COG5459 109 VPDFAPQSILDVGAGPGTGLWALNDIWPDLKSAVILEASP-ALRKVGDTLAENV---------STEKTDWRASDVTE--- 175 (484)
T ss_pred CCCcCcchhhccCCCCchhhhhhcccCCCchhhhhhccCH-HHHHHHHHHHhhc---------ccccCCCCCCccch---
Confidence 36789999999999998654433332 24666666664 2333333343333 22336666532110
Q ss_pred CCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhc
Q 020158 193 GNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLM 241 (330)
Q Consensus 193 ~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL 241 (330)
+ ...+.....|++|++.|=+-.+..-.++...|.++.
T Consensus 176 -d-----------Rl~lp~ad~ytl~i~~~eLl~d~~ek~i~~~ie~lw 212 (484)
T COG5459 176 -D-----------RLSLPAADLYTLAIVLDELLPDGNEKPIQVNIERLW 212 (484)
T ss_pred -h-----------ccCCCccceeehhhhhhhhccccCcchHHHHHHHHH
Confidence 0 011223457999999998887766665555555544
|
|
| >COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.65 E-value=0.92 Score=44.04 Aligned_cols=60 Identities=28% Similarity=0.309 Sum_probs=46.7
Q ss_pred CCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHH---ccCCCCCCCeeEEEEec
Q 020158 121 GIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQL---NSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~---N~~~~~~~~~v~v~~ld 181 (330)
-.+||=||-|-||..--+.+.- .+|+..|++|.|++..++|..+ |...+. ..++++..-|
T Consensus 290 a~~vLvlGGGDGLAlRellkyP~~~qI~lVdLDP~miela~~~~vlr~~N~~sf~-dpRv~Vv~dD 354 (508)
T COG4262 290 ARSVLVLGGGDGLALRELLKYPQVEQITLVDLDPRMIELASHATVLRALNQGSFS-DPRVTVVNDD 354 (508)
T ss_pred cceEEEEcCCchHHHHHHHhCCCcceEEEEecCHHHHHHhhhhhHhhhhccCCcc-CCeeEEEecc
Confidence 4689999999999988888873 6999999999999999977643 554443 4566665544
|
|
| >PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases | Back alignment and domain information |
|---|
Probab=89.22 E-value=1.1 Score=39.43 Aligned_cols=56 Identities=14% Similarity=0.116 Sum_probs=42.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHH
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~ 160 (330)
-.+-|.+.+.... ..+|..|||-=||+|-+++++.+++++.++.|++++..+.+++
T Consensus 176 kP~~l~~~lI~~~----t~~gdiVlDpF~GSGTT~~aa~~l~R~~ig~E~~~~y~~~a~~ 231 (231)
T PF01555_consen 176 KPVELIERLIKAS----TNPGDIVLDPFAGSGTTAVAAEELGRRYIGIEIDEEYCEIAKK 231 (231)
T ss_dssp S-HHHHHHHHHHH----S-TT-EEEETT-TTTHHHHHHHHTT-EEEEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHhh----hccceeeehhhhccChHHHHHHHcCCeEEEEeCCHHHHHHhcC
Confidence 3456666666552 3568899999999999999999999999999999998887753
|
In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B .... |
| >PRK11524 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.38 E-value=1.9 Score=40.37 Aligned_cols=58 Identities=14% Similarity=0.076 Sum_probs=48.6
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHH
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
+-|.+.|... ...+|..|||-=||+|-+++++.+++.+.++.|++++..+.+++.+..
T Consensus 195 ~~L~erlI~~----~S~~GD~VLDPF~GSGTT~~AA~~lgR~~IG~Ei~~~Y~~~a~~Rl~~ 252 (284)
T PRK11524 195 EALLKRIILA----SSNPGDIVLDPFAGSFTTGAVAKASGRKFIGIEINSEYIKMGLRRLDV 252 (284)
T ss_pred HHHHHHHHHH----hCCCCCEEEECCCCCcHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHh
Confidence 4455555544 346789999999999999999999999999999999999999888754
|
|
| >PF01189 Nol1_Nop2_Fmu: NOL1/NOP2/sun family; InterPro: IPR001678 This domain is found in archaeal, bacterial and eukaryotic proteins | Back alignment and domain information |
|---|
Probab=87.65 E-value=4.1 Score=38.22 Aligned_cols=77 Identities=16% Similarity=0.060 Sum_probs=58.2
Q ss_pred cCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCC
Q 020158 94 VGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFS 170 (330)
Q Consensus 94 ~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~ 170 (330)
.-..+++.+-.++-.++.. ..|.+|||+.||.|-=+..+|.. ...|++.|+++.=+..++.|+..-+
T Consensus 65 G~~~vQd~sS~l~~~~L~~------~~~~~VLD~CAapGgKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g---- 134 (283)
T PF01189_consen 65 GLFYVQDESSQLVALALDP------QPGERVLDMCAAPGGKTTHLAELMGNKGEIVANDISPKRLKRLKENLKRLG---- 134 (283)
T ss_dssp TSEEEHHHHHHHHHHHHTT------TTTSEEEESSCTTSHHHHHHHHHTTTTSEEEEEESSHHHHHHHHHHHHHTT----
T ss_pred CcEEecccccccccccccc------cccccccccccCCCCceeeeeecccchhHHHHhccCHHHHHHHHHHHHhcC----
Confidence 3456888877777666532 46788999999999777676665 2599999999999999999999876
Q ss_pred CCCeeEEEEec
Q 020158 171 HQGSVHVRDLN 181 (330)
Q Consensus 171 ~~~~v~v~~ld 181 (330)
..++.+...|
T Consensus 135 -~~~v~~~~~D 144 (283)
T PF01189_consen 135 -VFNVIVINAD 144 (283)
T ss_dssp --SSEEEEESH
T ss_pred -CceEEEEeec
Confidence 3556655533
|
In the archaea and bacteria, they are annotated as putative nucleolar protein, Sun (Fmu) family protein or tRNA/rRNA cytosine-C5-methylase. The majority have the S-adenosyl methionine (SAM) binding domain and are related to Escherichia coli Fmu (Sun) protein (16S rRNA m5C 967 methyltransferase) whose structure has been determined []. In the eukaryota, the majority are annotated as being 'hypothetical protein', nucleolar protein or the Nop2/Sun (Fmu) family. Unlike their bacterial homologues, few of the eukaryotic members in this family have a the SAM binding signature. Despite this, Saccharomyces cerevisiae (Baker's yeast) Nop2p is a probable RNA m5C methyltransferase []. It is essential for processing and maturation of 27S pre-rRNA and large ribosomal subunit biogenesis []; localized to the nucleolus and is essential for viability []. Reduced Nop2p expression limits yeast growth and decreases levels of mature 60S ribosomal subunits while altering rRNA processing []. There is substantial identity between Nop2p and Homo sapiens (Human) p120 (NOL1), which is also called the proliferation-associated nucleolar antigen [, ].; PDB: 3M4X_A 2FRX_B 2YXL_A 1IXK_A 1SQG_A 1SQF_A 3M6U_B 3M6V_B 3M6W_A 3M6X_A .... |
| >COG1565 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=87.36 E-value=2.3 Score=41.28 Aligned_cols=62 Identities=15% Similarity=0.177 Sum_probs=39.9
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh----------CCeEEEEeCchHHHHHHHHHHH
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV----------AWTVFLTDHGNYILDNCAKNVQ 163 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~----------~~~V~~TD~~~~~L~~~~~Nv~ 163 (330)
+-++|.|+.+.-..-.......++|||+|+|...--+.+. +.++.....|+.+...=+.+++
T Consensus 59 Gella~~~~~~wq~~g~p~~~~lvEiGaG~G~l~~DiL~~l~~L~P~~~~~~~~~iiE~s~~L~~~Qk~~L~ 130 (370)
T COG1565 59 GELLAEQFLQLWQELGRPAPLKLVEIGAGRGTLASDILRTLRRLYPELYEALSYYIIEPSPELRARQKETLK 130 (370)
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEEeCCCcChHHHHHHHHHHHhCHHHHhcceEEEEecCHHHHHHHHHHHh
Confidence 4567777766531112233468999999999666443332 4689999999876655555543
|
|
| >PRK13699 putative methylase; Provisional | Back alignment and domain information |
|---|
Probab=87.34 E-value=2.8 Score=38.02 Aligned_cols=57 Identities=9% Similarity=-0.025 Sum_probs=46.1
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHH
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
-|.+.+... ..-+|..|||-=||+|-+++++.+.+.+.++.|++++..+.+.+.+..
T Consensus 151 ~l~~~~i~~----~s~~g~~vlDpf~Gsgtt~~aa~~~~r~~~g~e~~~~y~~~~~~r~~~ 207 (227)
T PRK13699 151 TSLQPLIES----FTHPNAIVLDPFAGSGSTCVAALQSGRRYIGIELLEQYHRAGQQRLAA 207 (227)
T ss_pred HHHHHHHHH----hCCCCCEEEeCCCCCCHHHHHHHHcCCCEEEEecCHHHHHHHHHHHHH
Confidence 444544443 224788999999999999999999999999999999988888777755
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=87.07 E-value=1.1 Score=45.55 Aligned_cols=43 Identities=23% Similarity=0.188 Sum_probs=37.1
Q ss_pred CCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 118 DFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 118 ~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
...+.+|+=+|||. |+.++.+|+. |+.|+++|.+++-++.++.
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes 206 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES 206 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 35689999999996 9999988876 8899999999988887764
|
|
| >COG0293 FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=86.40 E-value=1.5 Score=39.17 Aligned_cols=67 Identities=13% Similarity=0.051 Sum_probs=47.8
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-C--eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-W--TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH 176 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~--~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~ 176 (330)
+|+.-|-+....+ .-.-.|.+|+||||-.|--+-++++.. . .|++.|+.|- .+...|.
T Consensus 28 RAa~KL~el~~k~---~i~~~~~~ViDLGAAPGgWsQva~~~~~~~~~ivavDi~p~----------------~~~~~V~ 88 (205)
T COG0293 28 RAAYKLLELNEKF---KLFKPGMVVVDLGAAPGGWSQVAAKKLGAGGKIVAVDILPM----------------KPIPGVI 88 (205)
T ss_pred hHHHHHHHHHHhc---CeecCCCEEEEcCCCCCcHHHHHHHHhCCCCcEEEEECccc----------------ccCCCce
Confidence 4666666655444 123357999999999999999999883 2 4999999752 1134588
Q ss_pred EEEecCCCC
Q 020158 177 VRDLNWMNP 185 (330)
Q Consensus 177 v~~ldW~~~ 185 (330)
+.+.|..+.
T Consensus 89 ~iq~d~~~~ 97 (205)
T COG0293 89 FLQGDITDE 97 (205)
T ss_pred EEeeeccCc
Confidence 888888775
|
|
| >PF07757 AdoMet_MTase: Predicted AdoMet-dependent methyltransferase; InterPro: IPR011671 tRNA (uracil-O(2)-)-methyltransferase catalyses the formation of O(2)-methyl-uracil at position 44 (m2U44) in tRNA(Ser) [] | Back alignment and domain information |
|---|
Probab=86.28 E-value=1.1 Score=35.85 Aligned_cols=31 Identities=23% Similarity=0.240 Sum_probs=26.1
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCeEEEEeCc
Q 020158 121 GIISLELGAGTGLAGILLSRVAWTVFLTDHG 151 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~ 151 (330)
...-+|||||.||+--++.+-|..=.+.|.-
T Consensus 59 ~~~FVDlGCGNGLLV~IL~~EGy~G~GiD~R 89 (112)
T PF07757_consen 59 FQGFVDLGCGNGLLVYILNSEGYPGWGIDAR 89 (112)
T ss_pred CCceEEccCCchHHHHHHHhCCCCccccccc
Confidence 3468999999999999999888877787764
|
; GO: 0008168 methyltransferase activity |
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=86.04 E-value=1.4 Score=42.55 Aligned_cols=42 Identities=29% Similarity=0.367 Sum_probs=35.8
Q ss_pred CCCCeEEEEcCcc-CHHHHHHHHh--CCeEEEEeCchHHHHHHHH
Q 020158 119 FNGIISLELGAGT-GLAGILLSRV--AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 119 ~~g~~VLELG~Gt-GL~gl~lA~~--~~~V~~TD~~~~~L~~~~~ 160 (330)
..+.+|+=+|||. ||+++.+|+. +.+|+++|.+++=|+++++
T Consensus 167 ~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~ 211 (350)
T COG1063 167 RPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKE 211 (350)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHH
Confidence 4455999999996 9999888887 4799999999998888875
|
|
| >KOG2352 consensus Predicted spermine/spermidine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.49 E-value=6 Score=39.76 Aligned_cols=101 Identities=13% Similarity=0.239 Sum_probs=63.7
Q ss_pred CeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHH-HHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 122 IISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNC-AKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~-~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
.++|.||||.--...-+-+-| ..|+.+|+++-+++.+ .+|+.. ..-..+...|-....
T Consensus 50 ~~~l~lGCGNS~l~e~ly~~G~~dI~~iD~S~V~V~~m~~~~~~~-------~~~~~~~~~d~~~l~------------- 109 (482)
T KOG2352|consen 50 FKILQLGCGNSELSEHLYKNGFEDITNIDSSSVVVAAMQVRNAKE-------RPEMQMVEMDMDQLV------------- 109 (482)
T ss_pred ceeEeecCCCCHHHHHHHhcCCCCceeccccHHHHHHHHhccccC-------CcceEEEEecchhcc-------------
Confidence 489999999987777776667 5899999998666544 455522 233455555433321
Q ss_pred cccccCccchhccCCeeEEEE----------eccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 200 ERYSWNSSELKEVQRASVLLA----------ADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIla----------aDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
+ +.+.||+||. ++-+++......-+.-+.++++++++ .+.+++
T Consensus 110 ---------f-edESFdiVIdkGtlDal~~de~a~~~~~~v~~~~~eVsrvl~~~gk-~~svtl 162 (482)
T KOG2352|consen 110 ---------F-EDESFDIVIDKGTLDALFEDEDALLNTAHVSNMLDEVSRVLAPGGK-YISVTL 162 (482)
T ss_pred ---------C-CCcceeEEEecCccccccCCchhhhhhHHhhHHHhhHHHHhccCCE-EEEEEe
Confidence 0 2346787775 33444444556677788888887654 344444
|
|
| >KOG1227 consensus Putative methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.84 E-value=0.56 Score=44.24 Aligned_cols=72 Identities=21% Similarity=0.340 Sum_probs=51.9
Q ss_pred eEeechHHHHHHH--HhhhcC-CCCCCCCCeEEEEcCccCHHHH-HHHHh-CCeEEEEeCchHHHHHHHHHHHHccC
Q 020158 96 LQVWKAELVLADF--VMHKMC-TSSDFNGIISLELGAGTGLAGI-LLSRV-AWTVFLTDHGNYILDNCAKNVQLNSG 167 (330)
Q Consensus 96 ~~vW~aa~~La~~--l~~~~~-~~~~~~g~~VLELG~GtGL~gl-~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~ 167 (330)
.+.|++...|=.+ +.+... ..-...|-.|.||=||.|...+ .+-.. ++.|++.|.+|..++.+++|++.|..
T Consensus 167 ~~~~d~t~~MFS~GN~~EK~Rv~~~sc~~eviVDLYAGIGYFTlpflV~agAk~V~A~EwNp~svEaLrR~~~~N~V 243 (351)
T KOG1227|consen 167 TQIWDPTKTMFSRGNIKEKKRVLNTSCDGEVIVDLYAGIGYFTLPFLVTAGAKTVFACEWNPWSVEALRRNAEANNV 243 (351)
T ss_pred EEEechhhhhhhcCcHHHHHHhhhcccccchhhhhhcccceEEeehhhccCccEEEEEecCHHHHHHHHHHHHhcch
Confidence 5788887765443 111100 0122356789999999998777 55555 57999999999999999999999964
|
|
| >cd00315 Cyt_C5_DNA_methylase Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology | Back alignment and domain information |
|---|
Probab=84.11 E-value=2 Score=40.05 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=35.0
Q ss_pred eEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHH
Q 020158 123 ISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNV 162 (330)
Q Consensus 123 ~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv 162 (330)
+|+||-||+|-.++.+...|. .|++.|+++.+++..+.|.
T Consensus 2 ~v~dLFsG~Gg~~~gl~~~G~~~v~a~e~~~~a~~~~~~N~ 42 (275)
T cd00315 2 RVIDLFAGIGGFRLGLEKAGFEIVAANEIDKSAAETYEANF 42 (275)
T ss_pred cEEEEccCcchHHHHHHHcCCEEEEEEeCCHHHHHHHHHhC
Confidence 699999999999888887775 5788999999999988887
|
Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability. |
| >KOG2671 consensus Putative RNA methylase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=83.75 E-value=1.5 Score=42.29 Aligned_cols=64 Identities=19% Similarity=0.106 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHH-------HHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILD-------NCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~-------~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
-.|+-|.|==.|||-.=+.+|..|+-|++||++-.++. .++.|++.-+.. ..-+.+...|..+.
T Consensus 207 ~pGdivyDPFVGTGslLvsaa~FGa~viGtDIDyr~vragrg~~~si~aNFkQYg~~---~~fldvl~~D~sn~ 277 (421)
T KOG2671|consen 207 KPGDIVYDPFVGTGSLLVSAAHFGAYVIGTDIDYRTVRAGRGEDESIKANFKQYGSS---SQFLDVLTADFSNP 277 (421)
T ss_pred CCCCEEecCccccCceeeehhhhcceeeccccchheeecccCCCcchhHhHHHhCCc---chhhheeeecccCc
Confidence 46889999999999888889999999999999977766 455666655532 33456666776654
|
|
| >PF02636 Methyltransf_28: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR003788 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=83.53 E-value=1.5 Score=40.24 Aligned_cols=43 Identities=16% Similarity=0.275 Sum_probs=29.4
Q ss_pred CCeEEEEcCccCHHHHHHHHh----------CCeEEEEeCchHHHHHHHHHHH
Q 020158 121 GIISLELGAGTGLAGILLSRV----------AWTVFLTDHGNYILDNCAKNVQ 163 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~----------~~~V~~TD~~~~~L~~~~~Nv~ 163 (330)
..+|+|+|+|.|..+.-+... ..++++.+.+|.+.+.-++++.
T Consensus 19 ~~~ivE~GaG~G~La~diL~~l~~~~p~~~~~~~y~ivE~Sp~L~~~Q~~~L~ 71 (252)
T PF02636_consen 19 PLRIVEIGAGRGTLARDILRYLRKFSPEVYKRLRYHIVEISPYLRERQKERLS 71 (252)
T ss_dssp -EEEEEES-TTSHHHHHHHHHHCCTTHHHHTTCEEEEE-TTCCCHHHHHHHCC
T ss_pred CcEEEEECCCchHHHHHHHHHHHHhChhhhhcceEEEEcCCHHHHHHHHHHhh
Confidence 369999999999766655543 1479999999877666555553
|
; PDB: 4F3N_A 1ZKD_B. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=81.64 E-value=3.4 Score=36.00 Aligned_cols=104 Identities=24% Similarity=0.356 Sum_probs=53.8
Q ss_pred eEEEEcCcc-C-HHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcccc
Q 020158 123 ISLELGAGT-G-LAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQE 200 (330)
Q Consensus 123 ~VLELG~Gt-G-L~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~ 200 (330)
+|-=+|+|+ | -.+..+|..|.+|++.|.+++.++.+++.+..+-......+.+. ... ......
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~-------~~~--------~~~~~~ 65 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLS-------QEE--------ADAALA 65 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTT-------HHH--------HHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccch-------hhh--------hhhhhh
Confidence 355688886 4 44555666699999999999998888777665321000000000 000 000000
Q ss_pred ccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccC
Q 020158 201 RYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPL 243 (330)
Q Consensus 201 ~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~ 243 (330)
...+. .+++.....|+|+=+ +.-+.+.-..+++.|..++.+
T Consensus 66 ~i~~~-~dl~~~~~adlViEa-i~E~l~~K~~~~~~l~~~~~~ 106 (180)
T PF02737_consen 66 RISFT-TDLEEAVDADLVIEA-IPEDLELKQELFAELDEICPP 106 (180)
T ss_dssp TEEEE-SSGGGGCTESEEEE--S-SSHHHHHHHHHHHHCCS-T
T ss_pred hcccc-cCHHHHhhhheehhh-ccccHHHHHHHHHHHHHHhCC
Confidence 01111 113333478988865 344556677888888888854
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >KOG3178 consensus Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.20 E-value=9.4 Score=36.80 Aligned_cols=93 Identities=15% Similarity=0.206 Sum_probs=61.1
Q ss_pred CeEEEEcCccC-HHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcccc
Q 020158 122 IISLELGAGTG-LAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQE 200 (330)
Q Consensus 122 ~~VLELG~GtG-L~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~ 200 (330)
...+|+|+|+| +++.++. .-.+|-+++....-+...+.+.. - + |.-...|....
T Consensus 179 ~~avDvGgGiG~v~k~ll~-~fp~ik~infdlp~v~~~a~~~~-~-------g-V~~v~gdmfq~--------------- 233 (342)
T KOG3178|consen 179 NVAVDVGGGIGRVLKNLLS-KYPHIKGINFDLPFVLAAAPYLA-P-------G-VEHVAGDMFQD--------------- 233 (342)
T ss_pred ceEEEcCCcHhHHHHHHHH-hCCCCceeecCHHHHHhhhhhhc-C-------C-cceeccccccc---------------
Confidence 67899999999 5556666 55568888887544444444442 1 1 33333443332
Q ss_pred ccccCccchhccCCeeEEEEeccccC--cccHHHHHHHHHHhccCCCCeEEEE
Q 020158 201 RYSWNSSELKEVQRASVLLAADVIYS--DDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 201 ~~~w~~~~~~~~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..+-|+|+.-=|+++ ++..-.+++.+.+.|.+++ +++++
T Consensus 234 -----------~P~~daI~mkWiLhdwtDedcvkiLknC~~sL~~~G-kIiv~ 274 (342)
T KOG3178|consen 234 -----------TPKGDAIWMKWILHDWTDEDCVKILKNCKKSLPPGG-KIIVV 274 (342)
T ss_pred -----------CCCcCeEEEEeecccCChHHHHHHHHHHHHhCCCCC-EEEEE
Confidence 125679999999988 6678889999999998853 44444
|
|
| >PF04672 Methyltransf_19: S-adenosyl methyltransferase; InterPro: IPR006764 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=80.57 E-value=9.8 Score=35.48 Aligned_cols=114 Identities=19% Similarity=0.233 Sum_probs=61.6
Q ss_pred CeEEEEcCcc---CHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 122 IISLELGAGT---GLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 122 ~~VLELG~Gt---GL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
...||||||. |-+=-++.+. .++|+-+|.+|-++...+.-+.-|. .+...+...|..++.....
T Consensus 70 rQFLDlGsGlPT~~nvHevAq~~~P~aRVVYVD~DPvv~ah~ralL~~~~-----~g~t~~v~aD~r~p~~iL~------ 138 (267)
T PF04672_consen 70 RQFLDLGSGLPTAGNVHEVAQRVAPDARVVYVDNDPVVLAHARALLADNP-----RGRTAYVQADLRDPEAILA------ 138 (267)
T ss_dssp -EEEEET--S--SS-HHHHHHHH-TT-EEEEEESSHHHHHCCHHHHTT-T-----TSEEEEEE--TT-HHHHHC------
T ss_pred ceEEEcccCCCCCCCHhHHHHhhCCCceEEEECCCchHHHHHHhhhcCCC-----CccEEEEeCCCCCHHHHhc------
Confidence 4689999994 3333333222 5899999999999988887776654 3567888888776522110
Q ss_pred ccccccccCccchhccCCeeEEEEeccccC---cccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYS---DDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~---~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
.+.- ...+ +..+.=-|+...++++ .+....+++++...|.+| ..+.++.-
T Consensus 139 ~p~~-----~~~l-D~~rPVavll~~vLh~v~D~~dp~~iv~~l~d~lapG--S~L~ish~ 191 (267)
T PF04672_consen 139 HPEV-----RGLL-DFDRPVAVLLVAVLHFVPDDDDPAGIVARLRDALAPG--SYLAISHA 191 (267)
T ss_dssp SHHH-----HCC---TTS--EEEECT-GGGS-CGCTHHHHHHHHHCCS-TT---EEEEEEE
T ss_pred CHHH-----HhcC-CCCCCeeeeeeeeeccCCCccCHHHHHHHHHHhCCCC--ceEEEEec
Confidence 0000 0001 1233445677777766 357888889999988775 45556543
|
; PDB: 3GIW_A 3GO4_A 2QE6_A. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.39 E-value=5.5 Score=39.20 Aligned_cols=53 Identities=19% Similarity=0.227 Sum_probs=36.7
Q ss_pred CeEEEEcCccCHHHHHH----HHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 122 IISLELGAGTGLAGILL----SRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~l----A~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++||=|||| .+|-.+ |+.+ .+|++.|.+.+-.+.+..+. ..++++..+|-.+.
T Consensus 2 ~~ilviGaG--~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~---------~~~v~~~~vD~~d~ 59 (389)
T COG1748 2 MKILVIGAG--GVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI---------GGKVEALQVDAADV 59 (389)
T ss_pred CcEEEECCc--hhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc---------cccceeEEecccCh
Confidence 579999995 444333 3445 79999999977666555443 34788888887765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 330 | |||
| 3bzb_A | 281 | Uncharacterized protein; RED ALGA, protein structu | 2e-23 |
| >3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} Length = 281 | Back alignment and structure |
|---|
Score = 96.5 bits (239), Expect = 2e-23
Identities = 43/192 (22%), Positives = 68/192 (35%), Gaps = 27/192 (14%)
Query: 69 PRRSKQSTRCFNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELG 128
R + ++Q T P VW LAD + + G ELG
Sbjct: 31 ERYQSPAGAPLQCSVQVQTTQEHPLWTSHVWSGARALADTLCWQ---PELIAGKTVCELG 87
Query: 129 AGTGLAGILLSRV-AWTVFLTDHGN-YILDNCAKNVQLN-----SGVFSHQGSVHVRDLN 181
AG GL I+ A V TD+ + IL++ N++ + S + S V
Sbjct: 88 AGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYR 147
Query: 182 WMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLM 241
W + + +QR V+L AD++ DAL ++K L+
Sbjct: 148 WGDSPDSLQ-----------------RCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLL 190
Query: 242 PLGSKKVLYLAL 253
L + +AL
Sbjct: 191 ALPANDPTAVAL 202
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 330 | |||
| 3bzb_A | 281 | Uncharacterized protein; RED ALGA, protein structu | 99.87 | |
| 3sm3_A | 235 | SAM-dependent methyltransferases; NESG, structural | 99.39 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 99.36 | |
| 1xxl_A | 239 | YCGJ protein; structural genomics, protein structu | 99.35 | |
| 3p9n_A | 189 | Possible methyltransferase (methylase); RV2966C, a | 99.34 | |
| 3lpm_A | 259 | Putative methyltransferase; structural genomics, p | 99.34 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 99.34 | |
| 4hc4_A | 376 | Protein arginine N-methyltransferase 6; HRMT1L6, S | 99.34 | |
| 3jwg_A | 219 | HEN1, methyltransferase type 12; 1.90A {Clostridiu | 99.33 | |
| 3lcc_A | 235 | Putative methyl chloride transferase; halide methy | 99.32 | |
| 3dh0_A | 219 | SAM dependent methyltransferase; cystal structure, | 99.32 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 99.31 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 99.31 | |
| 3dlc_A | 219 | Putative S-adenosyl-L-methionine-dependent methylt | 99.3 | |
| 3dmg_A | 381 | Probable ribosomal RNA small subunit methyltransf; | 99.29 | |
| 2xvm_A | 199 | Tellurite resistance protein TEHB; antibiotic resi | 99.29 | |
| 3evz_A | 230 | Methyltransferase; NYSGXRC, NEW YORK SGX research | 99.29 | |
| 3ofk_A | 216 | Nodulation protein S; NODS, N-methyltransferase, S | 99.28 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 99.28 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 99.28 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 99.28 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 99.28 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 99.28 | |
| 3kkz_A | 267 | Uncharacterized protein Q5LES9; putative methyltra | 99.28 | |
| 1dus_A | 194 | MJ0882; hypothetical protein, methanococcus jannas | 99.27 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 99.27 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 99.27 | |
| 4htf_A | 285 | S-adenosylmethionine-dependent methyltransferase; | 99.27 | |
| 1ve3_A | 227 | Hypothetical protein PH0226; dimer, riken structur | 99.27 | |
| 2fhp_A | 187 | Methylase, putative; alpha-beta-alpha sandwich, st | 99.26 | |
| 3g5l_A | 253 | Putative S-adenosylmethionine dependent methyltran | 99.26 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 99.26 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 99.26 | |
| 3jwh_A | 217 | HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena | 99.25 | |
| 2yxd_A | 183 | Probable cobalt-precorrin-6Y C(15)-methyltransfer | 99.25 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 99.25 | |
| 2ex4_A | 241 | Adrenal gland protein AD-003; methyltransferase, s | 99.25 | |
| 3mgg_A | 276 | Methyltransferase; NYSGXRC, PSI-II, protein struct | 99.24 | |
| 3m70_A | 286 | Tellurite resistance protein TEHB homolog; structu | 99.24 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 99.23 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 99.23 | |
| 3g5t_A | 299 | Trans-aconitate 3-methyltransferase; structural ge | 99.23 | |
| 2p7i_A | 250 | Hypothetical protein; putative methyltransferase, | 99.22 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 99.22 | |
| 3e23_A | 211 | Uncharacterized protein RPA2492; alpha-beta protei | 99.21 | |
| 2ift_A | 201 | Putative methylase HI0767; NESG, Y767_haein, struc | 99.21 | |
| 2kw5_A | 202 | SLR1183 protein; structural genomics, northeast st | 99.21 | |
| 3iv6_A | 261 | Putative Zn-dependent alcohol dehydrogenase; alpha | 99.21 | |
| 3gu3_A | 284 | Methyltransferase; alpha-beta protein, structural | 99.21 | |
| 2yqz_A | 263 | Hypothetical protein TTHA0223; RNA methyltransfera | 99.2 | |
| 2esr_A | 177 | Methyltransferase; structural genomics, hypothetic | 99.2 | |
| 3l8d_A | 242 | Methyltransferase; structural genomics, PSI, nysgr | 99.2 | |
| 3cgg_A | 195 | SAM-dependent methyltransferase; NP_600671.1, meth | 99.2 | |
| 3fzg_A | 200 | 16S rRNA methylase; methyltransferase, plasmid, tr | 99.2 | |
| 3h2b_A | 203 | SAM-dependent methyltransferase; alpha-beta protei | 99.19 | |
| 2p8j_A | 209 | S-adenosylmethionine-dependent methyltransferase; | 99.19 | |
| 3thr_A | 293 | Glycine N-methyltransferase; GNMT, folate, methylt | 99.19 | |
| 2ozv_A | 260 | Hypothetical protein ATU0636; structural genomics, | 99.18 | |
| 2fyt_A | 340 | Protein arginine N-methyltransferase 3; structural | 99.18 | |
| 4dcm_A | 375 | Ribosomal RNA large subunit methyltransferase G; 2 | 99.17 | |
| 4hg2_A | 257 | Methyltransferase type 11; structural genomics, PS | 99.17 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 99.17 | |
| 3g07_A | 292 | 7SK snRNA methylphosphate capping enzyme; structur | 99.17 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 99.17 | |
| 1ws6_A | 171 | Methyltransferase; structural genomics, riken stru | 99.17 | |
| 1yzh_A | 214 | TRNA (guanine-N(7)-)-methyltransferase; alpha-beta | 99.17 | |
| 3lec_A | 230 | NADB-rossmann superfamily protein; PSI, MCSG, stru | 99.17 | |
| 2fpo_A | 202 | Methylase YHHF; structural genomics, putative meth | 99.16 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 99.16 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 99.16 | |
| 3bkw_A | 243 | MLL3908 protein, S-adenosylmethionine dependent me | 99.16 | |
| 3r0q_C | 376 | Probable protein arginine N-methyltransferase 4.2; | 99.14 | |
| 3dtn_A | 234 | Putative methyltransferase MM_2633; structural gen | 99.14 | |
| 3q7e_A | 349 | Protein arginine N-methyltransferase 1; HET: SAH; | 99.14 | |
| 3hnr_A | 220 | Probable methyltransferase BT9727_4108; structural | 99.14 | |
| 3kr9_A | 225 | SAM-dependent methyltransferase; class I rossmann- | 99.14 | |
| 1y8c_A | 246 | S-adenosylmethionine-dependent methyltransferase; | 99.13 | |
| 3ege_A | 261 | Putative methyltransferase from antibiotic biosyn | 99.13 | |
| 1ri5_A | 298 | MRNA capping enzyme; methyltransferase, M7G, messe | 99.13 | |
| 2i62_A | 265 | Nicotinamide N-methyltransferase; structural genom | 99.13 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 99.12 | |
| 2p35_A | 259 | Trans-aconitate 2-methyltransferase; SAM dependent | 99.11 | |
| 3gnl_A | 244 | Uncharacterized protein, DUF633, LMOF2365_1472; st | 99.11 | |
| 1wzn_A | 252 | SAM-dependent methyltransferase; structural genomi | 99.11 | |
| 3bkx_A | 275 | SAM-dependent methyltransferase; YP_807781.1, cycl | 99.11 | |
| 3ggd_A | 245 | SAM-dependent methyltransferase; YP_325210.1, stru | 99.11 | |
| 3i9f_A | 170 | Putative type 11 methyltransferase; structural gen | 99.1 | |
| 1jsx_A | 207 | Glucose-inhibited division protein B; methyltransf | 99.1 | |
| 3gdh_A | 241 | Trimethylguanosine synthase homolog; M7G, CAP, dim | 99.1 | |
| 1g6q_1 | 328 | HnRNP arginine N-methyltransferase; SAM-binding do | 99.1 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 99.1 | |
| 1xtp_A | 254 | LMAJ004091AAA; SGPP, structural genomics, PSI, pro | 99.09 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 99.09 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 99.08 | |
| 3ccf_A | 279 | Cyclopropane-fatty-acyl-phospholipid synthase; YP_ | 99.08 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 99.08 | |
| 3g89_A | 249 | Ribosomal RNA small subunit methyltransferase G; 1 | 99.08 | |
| 3pfg_A | 263 | N-methyltransferase; N,N-dimethyltransferase, SAM | 99.08 | |
| 4fsd_A | 383 | Arsenic methyltransferase; rossmann fold; 1.75A {C | 99.07 | |
| 1xdz_A | 240 | Methyltransferase GIDB; MCSG, protein structure in | 99.07 | |
| 3e8s_A | 227 | Putative SAM dependent methyltransferase; NP_74470 | 99.07 | |
| 3q87_B | 170 | N6 adenine specific DNA methylase; SAM-methyltrans | 99.07 | |
| 1nv8_A | 284 | HEMK protein; class I adoMet-dependent methyltrans | 99.07 | |
| 2b3t_A | 276 | Protein methyltransferase HEMK; translation termin | 99.06 | |
| 3d2l_A | 243 | SAM-dependent methyltransferase; ZP_00538691.1, st | 99.06 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 99.06 | |
| 3g2m_A | 299 | PCZA361.24; SAM-dependent methyltransferase, glyco | 99.06 | |
| 4dzr_A | 215 | Protein-(glutamine-N5) methyltransferase, release | 99.05 | |
| 2gs9_A | 211 | Hypothetical protein TT1324; methyl transferase, s | 99.05 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.04 | |
| 2fca_A | 213 | TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac | 99.04 | |
| 1zx0_A | 236 | Guanidinoacetate N-methyltransferase; structural g | 99.03 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 99.03 | |
| 1wy7_A | 207 | Hypothetical protein PH1948; seven-stranded beta s | 99.02 | |
| 2pxx_A | 215 | Uncharacterized protein MGC2408; structural genomi | 99.02 | |
| 2a14_A | 263 | Indolethylamine N-methyltransferase; SGC,INMT, str | 99.02 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 99.02 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 99.01 | |
| 2g72_A | 289 | Phenylethanolamine N-methyltransferase; HET: SAM F | 99.01 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 99.01 | |
| 2y1w_A | 348 | Histone-arginine methyltransferase CARM1; histone | 99.01 | |
| 2frn_A | 278 | Hypothetical protein PH0793; structural genomics, | 99.01 | |
| 2igt_A | 332 | SAM dependent methyltransferase; alpha-beta sandwi | 99.0 | |
| 3v97_A | 703 | Ribosomal RNA large subunit methyltransferase L; Y | 99.0 | |
| 2avn_A | 260 | Ubiquinone/menaquinone biosynthesis methyltransfe | 98.99 | |
| 3u81_A | 221 | Catechol O-methyltransferase; neurotransmitter deg | 98.99 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 98.99 | |
| 3ntv_A | 232 | MW1564 protein; rossmann fold, putative methyltran | 98.99 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 98.99 | |
| 1nt2_A | 210 | Fibrillarin-like PRE-rRNA processing protein; adeM | 98.98 | |
| 3bxo_A | 239 | N,N-dimethyltransferase; desosamine, sugar, carboh | 98.98 | |
| 2pjd_A | 343 | Ribosomal RNA small subunit methyltransferase C; g | 98.98 | |
| 3cc8_A | 230 | Putative methyltransferase; structural genomics, j | 98.98 | |
| 3ocj_A | 305 | Putative exported protein; structural genomics, PS | 98.98 | |
| 3htx_A | 950 | HEN1; HEN1, small RNA methyltransferase, protein-R | 98.97 | |
| 2b78_A | 385 | Hypothetical protein SMU.776; structure genomics, | 98.97 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 98.96 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 98.96 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 98.95 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 98.95 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 98.95 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 98.95 | |
| 3dxy_A | 218 | TRNA (guanine-N(7)-)-methyltransferase; rossmann f | 98.94 | |
| 3a27_A | 272 | TYW2, uncharacterized protein MJ1557; wybutosine m | 98.94 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 98.94 | |
| 3bgv_A | 313 | MRNA CAP guanine-N7 methyltransferase; alternative | 98.93 | |
| 3b3j_A | 480 | Histone-arginine methyltransferase CARM1; protein | 98.93 | |
| 2ipx_A | 233 | RRNA 2'-O-methyltransferase fibrillarin; FBL, stru | 98.93 | |
| 1o9g_A | 250 | RRNA methyltransferase; antibiotic resistance, Se- | 98.93 | |
| 3c3p_A | 210 | Methyltransferase; NP_951602.1, structural genomic | 98.93 | |
| 2h00_A | 254 | Methyltransferase 10 domain containing protein; st | 98.92 | |
| 3gwz_A | 369 | MMCR; methyltransferase, mitomycin, S-adenosyl met | 98.92 | |
| 4dmg_A | 393 | Putative uncharacterized protein TTHA1493; rRNA, m | 98.92 | |
| 2r3s_A | 335 | Uncharacterized protein; methyltransferase domain, | 98.91 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 98.91 | |
| 1x19_A | 359 | CRTF-related protein; methyltransferase, bacterioc | 98.91 | |
| 2vdw_A | 302 | Vaccinia virus capping enzyme D1 subunit; nucleoti | 98.91 | |
| 1qzz_A | 374 | RDMB, aclacinomycin-10-hydroxylase; anthracycline, | 98.91 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 98.91 | |
| 1uwv_A | 433 | 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA m | 98.9 | |
| 3k6r_A | 278 | Putative transferase PH0793; structural genomics, | 98.9 | |
| 3frh_A | 253 | 16S rRNA methylase; methyltransferase domain, heli | 98.9 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 98.89 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 98.89 | |
| 3dp7_A | 363 | SAM-dependent methyltransferase; structural genomi | 98.89 | |
| 3tma_A | 354 | Methyltransferase; thump domain; 2.05A {Thermus th | 98.89 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 98.88 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 98.88 | |
| 2aot_A | 292 | HMT, histamine N-methyltransferase; classic methyl | 98.87 | |
| 2ip2_A | 334 | Probable phenazine-specific methyltransferase; pyo | 98.87 | |
| 3i53_A | 332 | O-methyltransferase; CO-complex, rossmann-like fol | 98.87 | |
| 3mq2_A | 218 | 16S rRNA methyltransferase; methyltranferase, ribo | 98.87 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 98.86 | |
| 3c0k_A | 396 | UPF0064 protein YCCW; PUA domain, adoMet dependent | 98.86 | |
| 1tw3_A | 360 | COMT, carminomycin 4-O-methyltransferase; anthracy | 98.86 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 98.85 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 98.84 | |
| 3mcz_A | 352 | O-methyltransferase; adomet_mtases, S-adenosylmeth | 98.84 | |
| 3r3h_A | 242 | O-methyltransferase, SAM-dependent; structural gen | 98.83 | |
| 1wxx_A | 382 | TT1595, hypothetical protein TTHA1280; thermus the | 98.83 | |
| 2as0_A | 396 | Hypothetical protein PH1915; RNA methyltransferase | 98.83 | |
| 2qm3_A | 373 | Predicted methyltransferase; putative methyltransf | 98.82 | |
| 1vlm_A | 219 | SAM-dependent methyltransferase; possible histamin | 98.81 | |
| 1af7_A | 274 | Chemotaxis receptor methyltransferase CHER; chemot | 98.81 | |
| 1g8a_A | 227 | Fibrillarin-like PRE-rRNA processing protein; rRNA | 98.81 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 98.8 | |
| 2vdv_E | 246 | TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl | 98.8 | |
| 3lcv_B | 281 | Sisomicin-gentamicin resistance methylase SGM; ant | 98.8 | |
| 2jjq_A | 425 | Uncharacterized RNA methyltransferase pyrab10780; | 98.8 | |
| 2yx1_A | 336 | Hypothetical protein MJ0883; methyl transferase, t | 98.8 | |
| 1ne2_A | 200 | Hypothetical protein TA1320; structural genomics, | 98.8 | |
| 3tm4_A | 373 | TRNA (guanine N2-)-methyltransferase TRM14; rossma | 98.79 | |
| 1u2z_A | 433 | Histone-lysine N-methyltransferase, H3 lysine-79 s | 98.78 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 98.78 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 98.78 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 98.77 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 98.77 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 98.76 | |
| 4e2x_A | 416 | TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s | 98.75 | |
| 3ajd_A | 274 | Putative methyltransferase MJ0026; tRNA, M5C, ross | 98.75 | |
| 3opn_A | 232 | Putative hemolysin; structural genomics, PSI-2, pr | 98.75 | |
| 3bt7_A | 369 | TRNA (uracil-5-)-methyltransferase; methyluridine, | 98.74 | |
| 3id6_C | 232 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 98.74 | |
| 1ixk_A | 315 | Methyltransferase; open beta sheet; 1.90A {Pyrococ | 98.73 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 98.72 | |
| 2h1r_A | 299 | Dimethyladenosine transferase, putative; SGC toron | 98.72 | |
| 3ckk_A | 235 | TRNA (guanine-N(7)-)-methyltransferase; mettl1, S- | 98.71 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 98.7 | |
| 2qe6_A | 274 | Uncharacterized protein TFU_2867; putative methylt | 98.7 | |
| 3hp7_A | 291 | Hemolysin, putative; structural genomics, APC64019 | 98.69 | |
| 2dul_A | 378 | N(2),N(2)-dimethylguanosine tRNA methyltransferas; | 98.68 | |
| 3ll7_A | 410 | Putative methyltransferase; methytransferase, stru | 98.67 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 98.65 | |
| 1zq9_A | 285 | Probable dimethyladenosine transferase; SGC, struc | 98.63 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 98.62 | |
| 3p2e_A | 225 | 16S rRNA methylase; methyltransferase, transferase | 98.61 | |
| 2bm8_A | 236 | Cephalosporin hydroxylase CMCI; cephamycin biosynt | 98.6 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 98.6 | |
| 2zfu_A | 215 | Nucleomethylin, cerebral protein 1; nucleolar prot | 98.59 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 98.59 | |
| 2yxl_A | 450 | PH0851 protein, 450AA long hypothetical FMU protei | 98.59 | |
| 3axs_A | 392 | Probable N(2),N(2)-dimethylguanosine tRNA methylt | 98.58 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 98.56 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 98.56 | |
| 3gru_A | 295 | Dimethyladenosine transferase; rossman fold, ribos | 98.56 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 98.56 | |
| 1uir_A | 314 | Polyamine aminopropyltransferase; spermidien synth | 98.55 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 98.54 | |
| 3lst_A | 348 | CALO1 methyltransferase; calicheamicin, enediyne, | 98.54 | |
| 3dou_A | 191 | Ribosomal RNA large subunit methyltransferase J; c | 98.53 | |
| 3ldu_A | 385 | Putative methylase; structural genomics, PSI-2, pr | 98.52 | |
| 2pt6_A | 321 | Spermidine synthase; transferase, structural genom | 98.52 | |
| 1qam_A | 244 | ERMC' methyltransferase; rRNA methyltransferase ER | 98.51 | |
| 2r6z_A | 258 | UPF0341 protein in RSP 3' region; alpha-beta prote | 98.51 | |
| 2frx_A | 479 | Hypothetical protein YEBU; rossmann-type S-adenosy | 98.5 | |
| 4a6d_A | 353 | Hydroxyindole O-methyltransferase; melatonin, circ | 98.5 | |
| 3k0b_A | 393 | Predicted N6-adenine-specific DNA methylase; methy | 98.5 | |
| 3m6w_A | 464 | RRNA methylase; rRNA methyltransferase, 5-methylcy | 98.49 | |
| 2f8l_A | 344 | Hypothetical protein LMO1582; structural genomics, | 98.49 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 98.49 | |
| 3tqs_A | 255 | Ribosomal RNA small subunit methyltransferase A; p | 98.47 | |
| 2plw_A | 201 | Ribosomal RNA methyltransferase, putative; malaria | 98.46 | |
| 3m4x_A | 456 | NOL1/NOP2/SUN family protein; mtase domain, PUA do | 98.46 | |
| 1fp2_A | 352 | Isoflavone O-methyltransferase; protein-product co | 98.45 | |
| 3ldg_A | 384 | Putative uncharacterized protein SMU.472; YPSC, me | 98.45 | |
| 1sqg_A | 429 | SUN protein, FMU protein; rossmann-fold, mixed bet | 98.42 | |
| 3fut_A | 271 | Dimethyladenosine transferase; methyltransferase, | 98.41 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 98.4 | |
| 1fp1_D | 372 | Isoliquiritigenin 2'-O-methyltransferase; protein- | 98.4 | |
| 3reo_A | 368 | (ISO)eugenol O-methyltransferase; directed evoluti | 98.37 | |
| 2oxt_A | 265 | Nucleoside-2'-O-methyltransferase; flavivirus, vir | 98.37 | |
| 2wa2_A | 276 | Non-structural protein 5; transferase, S-adenosyl- | 98.35 | |
| 3p9c_A | 364 | Caffeic acid O-methyltransferase; S-adenosylmethio | 98.32 | |
| 2cmg_A | 262 | Spermidine synthase; transferase, putrescine amino | 98.27 | |
| 1zg3_A | 358 | Isoflavanone 4'-O-methyltransferase; rossman fold, | 98.26 | |
| 2okc_A | 445 | Type I restriction enzyme stysji M protein; NP_813 | 98.26 | |
| 2ih2_A | 421 | Modification methylase TAQI; DNA, DNA methyltransf | 98.24 | |
| 2b9e_A | 309 | NOL1/NOP2/SUN domain family, member 5 isoform 2; m | 98.21 | |
| 3ftd_A | 249 | Dimethyladenosine transferase; KSGA, rossmann-like | 98.21 | |
| 1m6y_A | 301 | S-adenosyl-methyltransferase MRAW; SAM-dependent m | 98.17 | |
| 2k4m_A | 153 | TR8_protein, UPF0146 protein MTH_1000; alpha+beta, | 98.15 | |
| 2p41_A | 305 | Type II methyltransferase; vizier, viral enzymes i | 98.12 | |
| 3giw_A | 277 | Protein of unknown function DUF574; rossmann-fold | 98.11 | |
| 3sso_A | 419 | Methyltransferase; macrolide, natural product, ros | 98.11 | |
| 1yub_A | 245 | Ermam, rRNA methyltransferase; MLS antibiotics; NM | 98.08 | |
| 3uzu_A | 279 | Ribosomal RNA small subunit methyltransferase A; s | 98.07 | |
| 3v97_A | 703 | Ribosomal RNA large subunit methyltransferase L; Y | 98.07 | |
| 4gqb_A | 637 | Protein arginine N-methyltransferase 5; TIM barrel | 98.05 | |
| 2ld4_A | 176 | Anamorsin; methyltransferase-like fold, alpha/beta | 97.99 | |
| 2qfm_A | 364 | Spermine synthase; spermidine aminopropyltransfera | 97.96 | |
| 3ua3_A | 745 | Protein arginine N-methyltransferase 5; TIM-barrel | 97.9 | |
| 1qyr_A | 252 | KSGA, high level kasugamycin resistance protein, S | 97.88 | |
| 2oyr_A | 258 | UPF0341 protein YHIQ; alpha-beta protein, structur | 97.77 | |
| 2ar0_A | 541 | M.ecoki, type I restriction enzyme ecoki M protein | 97.75 | |
| 3s1s_A | 878 | Restriction endonuclease bpusi; PD--(D/E)XK cataly | 97.68 | |
| 2zig_A | 297 | TTHA0409, putative modification methylase; methylt | 97.65 | |
| 3cvo_A | 202 | Methyltransferase-like protein of unknown functio; | 97.64 | |
| 3lkd_A | 542 | Type I restriction-modification system methyltrans | 97.48 | |
| 2xyq_A | 290 | Putative 2'-O-methyl transferase; transferase-vira | 97.45 | |
| 3khk_A | 544 | Type I restriction-modification system methylation | 97.37 | |
| 1g60_A | 260 | Adenine-specific methyltransferase MBOIIA; structu | 97.22 | |
| 2qy6_A | 257 | UPF0209 protein YFCK; structural genomics, unknown | 97.17 | |
| 3o4f_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 97.15 | |
| 3evf_A | 277 | RNA-directed RNA polymerase NS5; NS5 methyltransfe | 96.64 | |
| 4auk_A | 375 | Ribosomal RNA large subunit methyltransferase M; Y | 96.42 | |
| 2wk1_A | 282 | NOVP; transferase, O-methyltransferase, novobiocin | 96.01 | |
| 4fzv_A | 359 | Putative methyltransferase NSUN4; mterf fold, meth | 95.47 | |
| 2oo3_A | 283 | Protein involved in catabolism of external DNA; st | 95.38 | |
| 3ufb_A | 530 | Type I restriction-modification system methyltran | 95.3 | |
| 2py6_A | 409 | Methyltransferase FKBM; YP_546752.1, structural ge | 95.14 | |
| 3b5i_A | 374 | S-adenosyl-L-methionine:salicylic acid carboxyl me | 95.07 | |
| 1i4w_A | 353 | Mitochondrial replication protein MTF1; mitochondr | 95.05 | |
| 3c6k_A | 381 | Spermine synthase; spermidine aminopropyltransfera | 94.86 | |
| 1wg8_A | 285 | Predicted S-adenosylmethionine-dependent methyltra | 94.6 | |
| 4dcm_A | 375 | Ribosomal RNA large subunit methyltransferase G; 2 | 94.57 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 93.84 | |
| 3lkz_A | 321 | Non-structural protein 5; flavivirus, methyltransf | 93.18 | |
| 3gcz_A | 282 | Polyprotein; flavivirus, RNA capping, methyltransf | 92.84 | |
| 2c7p_A | 327 | Modification methylase HHAI; DNA methyltransferase | 92.33 | |
| 1boo_A | 323 | Protein (N-4 cytosine-specific methyltransferase P | 92.15 | |
| 3p8z_A | 267 | Mtase, non-structural protein 5; methyltransferase | 91.9 | |
| 1g55_A | 343 | DNA cytosine methyltransferase DNMT2; human DNA me | 91.08 | |
| 2efj_A | 384 | 3,7-dimethylxanthine methyltransferase; SAM-depend | 91.03 | |
| 1eg2_A | 319 | Modification methylase RSRI; rossmann fold, exocyc | 90.43 | |
| 3eld_A | 300 | Methyltransferase; flavivirus, RNA capping, guanyl | 90.4 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 89.05 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 88.25 | |
| 2qrv_A | 295 | DNA (cytosine-5)-methyltransferase 3A; DNA methylt | 88.01 | |
| 3g7u_A | 376 | Cytosine-specific methyltransferase; DNA-binding, | 87.42 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 87.11 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 86.22 | |
| 1m6e_X | 359 | S-adenosyl-L-methionnine:salicylic acid carboxyl m | 85.33 | |
| 2px2_A | 269 | Genome polyprotein [contains: capsid protein C (co | 85.21 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 85.05 | |
| 1rjd_A | 334 | PPM1P, carboxy methyl transferase for protein phos | 84.9 | |
| 3qv2_A | 327 | 5-cytosine DNA methyltransferase; DNMT2, ehmeth; H | 84.56 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 84.4 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 84.31 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 84.27 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 84.25 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 84.16 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 83.56 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 83.17 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 82.61 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 82.45 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 82.39 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 81.19 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 81.08 | |
| 3ado_A | 319 | Lambda-crystallin; L-gulonate 3-dehydrogenase, str | 81.02 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 80.65 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 80.35 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 80.28 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 80.13 |
| >3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.2e-21 Score=175.97 Aligned_cols=198 Identities=21% Similarity=0.253 Sum_probs=123.9
Q ss_pred cCCCCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeC-chHHHHHHHHHHHHcc
Q 020158 89 SLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDH-GNYILDNCAKNVQLNS 166 (330)
Q Consensus 89 t~~~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~-~~~~L~~~~~Nv~~N~ 166 (330)
.....+|+.+|+++..|++|+.... ...++++|||||||+|..++.+++.+. +|+++|+ ++.+++.++.|+..|.
T Consensus 51 g~~~~~g~~~~~~~~~l~~~l~~~~---~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~ 127 (281)
T 3bzb_A 51 QEHPLWTSHVWSGARALADTLCWQP---ELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHT 127 (281)
T ss_dssp -----------CHHHHHHHHHHHCG---GGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCceeecHHHHHHHHHHhcc---hhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhh
Confidence 3456789999999999999998863 456889999999999999999999876 9999999 8999999999997663
Q ss_pred CCCCC-C----CeeEEEEecCCCCCCCCccCCCCCccccccccCccchh--ccCCeeEEEEeccccCcccHHHHHHHHHH
Q 020158 167 GVFSH-Q----GSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELK--EVQRASVLLAADVIYSDDLTDALFHTLKR 239 (330)
Q Consensus 167 ~~~~~-~----~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~--~~~~~DlIlaaDviY~~~~~~~l~~tl~~ 239 (330)
..... . .++.+..++|++..... .. ...+||+|+++|++|+......+++++.+
T Consensus 128 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~-------------------~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~ 188 (281)
T 3bzb_A 128 ANSCSSETVKRASPKVVPYRWGDSPDSL-------------------QRCTGLQRFQVVLLADLLSFHQAHDALLRSVKM 188 (281)
T ss_dssp C----------CCCEEEECCTTSCTHHH-------------------HHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHH
T ss_pred hhhcccccCCCCCeEEEEecCCCccHHH-------------------HhhccCCCCCEEEEeCcccChHHHHHHHHHHHH
Confidence 21110 1 47899999999852110 00 13589999999999999999999999999
Q ss_pred hcc---CCCCeEEEEEeeeeCcccccchhhhccccchhhhhhhhhhcccccccccCCC-eeeEEec-CCCcCcccccccC
Q 020158 240 LMP---LGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIMEEGEHRRFERESFPA-FVGKCID-LNEFPQYVREYDR 314 (330)
Q Consensus 240 lL~---~~~~~~i~va~~~R~~f~~~~~d~v~~~y~~f~~~l~~~~~~~~~~~~~~~~-f~v~~i~-~~~~p~~~~~yer 314 (330)
+|+ +++++.+++.+..+..... .....|...+. ..| |.++.+. ....+..| ++++
T Consensus 189 ~Lk~~~p~~gG~l~v~~~~~~~~~~-------~~~~~~~~~l~------------~~G~f~v~~~~~~~~~~~~f-~~~~ 248 (281)
T 3bzb_A 189 LLALPANDPTAVALVTFTHHRPHLA-------ERDLAFFRLVN------------ADGALIAEPWLSPLQMDPMF-PDDP 248 (281)
T ss_dssp HBCCTTTCTTCEEEEEECC---------------CTHHHHHHH------------HSTTEEEEEEECCC-----------
T ss_pred HhcccCCCCCCEEEEEEEeeecccc-------hhHHHHHHHHH------------hcCCEEEEEecccccccccc-ccCC
Confidence 998 7334566655444332110 01122333222 357 8888773 22333444 3333
Q ss_pred C-----CceEEEEEEeccC
Q 020158 315 G-----NDVELWQIKRSEN 328 (330)
Q Consensus 315 ~-----~~l~lw~i~~~~~ 328 (330)
. ..+.+|++++++.
T Consensus 249 ~~~~~r~~V~~~~l~~~~~ 267 (281)
T 3bzb_A 249 GDVCIRGQVHRWRLRWRSA 267 (281)
T ss_dssp --------CEEEEEEEC--
T ss_pred cchhccceEEEEEEEcccc
Confidence 2 3789999998653
|
| >3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.3e-11 Score=109.13 Aligned_cols=108 Identities=14% Similarity=0.099 Sum_probs=86.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++.+|||+|||+|..++.++..+.+|+++|+++.+++.+++|+..++.......++.+...|......
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------------ 97 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF------------ 97 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS------------
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC------------
Confidence 67899999999999999999999999999999999999999987765322113467777777654310
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHH---HHHHHHHHhccCCCCeEEEEE
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTD---ALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~---~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|+++.++++....+ .+++.+.++|+++ +.+++.
T Consensus 98 -----------~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg--G~l~~~ 140 (235)
T 3sm3_A 98 -----------HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPG--AYLYLV 140 (235)
T ss_dssp -----------CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred -----------CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCC--eEEEEE
Confidence 135899999999999887766 8999999999875 445544
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.3e-11 Score=106.99 Aligned_cols=102 Identities=10% Similarity=0.097 Sum_probs=80.1
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
...++.+|||+|||+|..++.+|+.+.+|+++|+++.+++.+++|+..++. ..++.+...|..+..
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~----~~~v~~~~~d~~~~~---------- 117 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGL----SPRMRAVQGTAPAAL---------- 117 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCTTGGG----------
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC----CCCEEEEeCchhhhc----------
Confidence 345678999999999999999999999999999999999999999999874 237888887765421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.....||+|++...+ ..+ +++.+.++|++++ .+++.
T Consensus 118 -------------~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG--~lv~~ 153 (204)
T 3njr_A 118 -------------ADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGT--RIVAN 153 (204)
T ss_dssp -------------TTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTC--EEEEE
T ss_pred -------------ccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCc--EEEEE
Confidence 122479999976643 345 9999999998764 44443
|
| >1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=9.7e-12 Score=111.43 Aligned_cols=118 Identities=9% Similarity=-0.010 Sum_probs=95.3
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
.|+.+..+.+.+ ...++.+|||+|||+|..++.++..+.+|+++|+++.+++.+++++..++. .++.+
T Consensus 6 ~~~~~~~~~~~~-------~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~ 73 (239)
T 1xxl_A 6 HHHSLGLMIKTA-------ECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGV-----ENVRF 73 (239)
T ss_dssp CHHHHHHHHHHH-------TCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTC-----CSEEE
T ss_pred cCCCcchHHHHh-------CcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-----CCeEE
Confidence 356666666654 445788999999999999999999888999999999999999999988763 56888
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...|+.+... ..+.||+|++..++++......+++.+.++|+++ +.+++.
T Consensus 74 ~~~d~~~~~~-----------------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg--G~l~~~ 123 (239)
T 1xxl_A 74 QQGTAESLPF-----------------------PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD--GRFLLV 123 (239)
T ss_dssp EECBTTBCCS-----------------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--EEEEEE
T ss_pred EecccccCCC-----------------------CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCC--cEEEEE
Confidence 8888755310 1257999999999999889999999999999875 444443
|
| >3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.34 E-value=5.4e-12 Score=108.93 Aligned_cols=112 Identities=17% Similarity=0.159 Sum_probs=86.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.++.+|||||||+|..++.++..+ .+|+++|+++.+++.+++|+..|+. .++++...|+.+....
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~--------- 108 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-----SGATLRRGAVAAVVAA--------- 108 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-----SCEEEEESCHHHHHHH---------
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEccHHHHHhh---------
Confidence 678999999999999999777775 5899999999999999999999873 5788888876543100
Q ss_pred cccccccCccchhccCCeeEEEEeccccCc-ccHHHHHHHHHH--hccCCCCeEEEEEeeeeCc
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSD-DLTDALFHTLKR--LMPLGSKKVLYLALEKRYN 258 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~-~~~~~l~~tl~~--lL~~~~~~~i~va~~~R~~ 258 (330)
....+||+|++...++.. .....+++.+.+ +|+++ +.+++....+..
T Consensus 109 ------------~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pg--G~l~~~~~~~~~ 158 (189)
T 3p9n_A 109 ------------GTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREG--TVAVVERATTCA 158 (189)
T ss_dssp ------------CCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTT--CEEEEEEETTSC
T ss_pred ------------ccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCC--eEEEEEecCCCC
Confidence 013589999987664442 678889999998 89765 567776665543
|
| >3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.9e-12 Score=116.53 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=94.5
Q ss_pred cCeEeechHHHHHHHHhhhcCCCCCC-CCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCC
Q 020158 94 VGLQVWKAELVLADFVMHKMCTSSDF-NGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSH 171 (330)
Q Consensus 94 ~G~~vW~aa~~La~~l~~~~~~~~~~-~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~ 171 (330)
.|++..-.+.+|+.|+ ..- ++.+|||+|||+|..++.+|..+. +|+++|+++.+++.+++|+..|+.
T Consensus 29 ~~~~~~~d~~ll~~~~-------~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~---- 97 (259)
T 3lpm_A 29 SVFSFSIDAVLLAKFS-------YLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQL---- 97 (259)
T ss_dssp TTBCCCHHHHHHHHHC-------CCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTC----
T ss_pred CCccCcHHHHHHHHHh-------cCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCC----
Confidence 3566666788888885 223 688999999999999999998865 999999999999999999999875
Q ss_pred CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--------------------ccHH
Q 020158 172 QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--------------------DLTD 231 (330)
Q Consensus 172 ~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--------------------~~~~ 231 (330)
..++.+...|+.+..... ...+||+|++...+|.. ...+
T Consensus 98 ~~~v~~~~~D~~~~~~~~---------------------~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~ 156 (259)
T 3lpm_A 98 EDQIEIIEYDLKKITDLI---------------------PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLE 156 (259)
T ss_dssp TTTEEEECSCGGGGGGTS---------------------CTTCEEEEEECCCC-----------------------HHHH
T ss_pred cccEEEEECcHHHhhhhh---------------------ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHH
Confidence 356888888876542100 13589999997776654 2356
Q ss_pred HHHHHHHHhccCCCCeEEEEE
Q 020158 232 ALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 232 ~l~~tl~~lL~~~~~~~i~va 252 (330)
.+++.+.++|+++ +.+++.
T Consensus 157 ~~l~~~~~~Lkpg--G~l~~~ 175 (259)
T 3lpm_A 157 DTIRVAASLLKQG--GKANFV 175 (259)
T ss_dssp HHHHHHHHHEEEE--EEEEEE
T ss_pred HHHHHHHHHccCC--cEEEEE
Confidence 7999999999875 445543
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-11 Score=111.43 Aligned_cols=115 Identities=12% Similarity=0.039 Sum_probs=92.5
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
..+++.... ...++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++. ..++.+...|+.
T Consensus 24 ~~~~l~~~~---~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~----~~~v~~~~~d~~ 96 (256)
T 1nkv_A 24 KYATLGRVL---RMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGV----SERVHFIHNDAA 96 (256)
T ss_dssp HHHHHHHHT---CCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCCT
T ss_pred HHHHHHHhc---CCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCC----CcceEEEECChH
Confidence 344454442 3457889999999999999988876 78999999999999999999988763 357889888887
Q ss_pred CCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 184 NPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+... .+.||+|++..++++......+++.+.++|+++ +.+++.
T Consensus 97 ~~~~------------------------~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg--G~l~~~ 139 (256)
T 1nkv_A 97 GYVA------------------------NEKCDVAACVGATWIAGGFAGAEELLAQSLKPG--GIMLIG 139 (256)
T ss_dssp TCCC------------------------SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE--EEEEEE
T ss_pred hCCc------------------------CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC--eEEEEe
Confidence 6421 257999999999999888899999999999876 445444
|
| >4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.3e-12 Score=122.09 Aligned_cols=100 Identities=17% Similarity=0.313 Sum_probs=84.9
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..++|++|||+|||||++|+.+|+.| ++|+++|.++ |++.+++++..|+. ..++.+...+..+.
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~----~~~i~~i~~~~~~~---------- 144 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGL----EDRVHVLPGPVETV---------- 144 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTC----TTTEEEEESCTTTC----------
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCC----CceEEEEeeeeeee----------
Confidence 56899999999999999999999996 5899999985 88999999999986 47788888776543
Q ss_pred CccccccccCccchhccCCeeEEEE---eccccCcccHHHHHHHHHHhccCCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLA---ADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIla---aDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
...+++|+||+ ...+.+...++.++....++|++++
T Consensus 145 --------------~lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G 183 (376)
T 4hc4_A 145 --------------ELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGG 183 (376)
T ss_dssp --------------CCSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEE
T ss_pred --------------cCCccccEEEeecccccccccchhhhHHHHHHhhCCCCc
Confidence 12358999997 6677778899999999999998763
|
| >3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A | Back alignment and structure |
|---|
Probab=99.33 E-value=3.4e-11 Score=105.97 Aligned_cols=125 Identities=14% Similarity=0.064 Sum_probs=91.0
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
+-.....+++.... ...++++|||+|||+|..+..+++.+ .+|+++|+++.+++.+++|+..++.......++.+
T Consensus 12 ~~~~~~~~~l~~~l---~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~ 88 (219)
T 3jwg_A 12 NLNQQRLGTVVAVL---KSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISL 88 (219)
T ss_dssp CHHHHHHHHHHHHH---HHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEE
T ss_pred cchHHHHHHHHHHH---hhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEE
Confidence 33444445554442 23467899999999999999999876 69999999999999999999876531000126888
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCCCeEEEEE
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...|+.... ....+||+|++.+++++... ...+++.+.++|+++ ++++..
T Consensus 89 ~~~d~~~~~-----------------------~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--G~~i~~ 140 (219)
T 3jwg_A 89 FQSSLVYRD-----------------------KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQ--TVIVST 140 (219)
T ss_dssp EECCSSSCC-----------------------GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCS--EEEEEE
T ss_pred EeCcccccc-----------------------cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCC--EEEEEc
Confidence 888864321 02358999999999998774 478999999999875 444443
|
| >3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.6e-11 Score=107.98 Aligned_cols=109 Identities=10% Similarity=0.047 Sum_probs=88.2
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
..+.+++... .+++.+|||+|||+|..++.++..+.+|+++|+++.+++.+++++..+.. ..++.+...|+
T Consensus 54 ~~l~~~~~~~-----~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~ 124 (235)
T 3lcc_A 54 PLIVHLVDTS-----SLPLGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPK----AEYFSFVKEDV 124 (235)
T ss_dssp HHHHHHHHTT-----CSCCEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGG----GGGEEEECCCT
T ss_pred HHHHHHHHhc-----CCCCCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCC----CcceEEEECch
Confidence 3455555432 24556999999999999999998888999999999999999999876432 36788998888
Q ss_pred CCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCC
Q 020158 183 MNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLG 244 (330)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~ 244 (330)
.+..+ ...||+|++..++++.. ....+++.+.++|+++
T Consensus 125 ~~~~~------------------------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 164 (235)
T 3lcc_A 125 FTWRP------------------------TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPD 164 (235)
T ss_dssp TTCCC------------------------SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEE
T ss_pred hcCCC------------------------CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCC
Confidence 76421 24799999999999866 8899999999999876
|
| >3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.32 E-value=3.9e-11 Score=105.31 Aligned_cols=105 Identities=16% Similarity=0.078 Sum_probs=87.5
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
..++.+|||+|||+|..+..+++.+ .+|+++|+++.+++.+++++..++. .++.+...|+.+...
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~~~~------- 102 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL-----KNVEVLKSEENKIPL------- 102 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC-----TTEEEEECBTTBCSS-------
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEecccccCCC-------
Confidence 3467899999999999999999886 7999999999999999999988763 468888888765310
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|+++.++++......+++.+.++|+++ +.+++.
T Consensus 103 ----------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg--G~l~i~ 142 (219)
T 3dh0_A 103 ----------------PDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPF--AYLAII 142 (219)
T ss_dssp ----------------CSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEE--EEEEEE
T ss_pred ----------------CCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCC--eEEEEE
Confidence 1357999999999999989999999999999875 445444
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=99.31 E-value=3.5e-11 Score=109.37 Aligned_cols=123 Identities=15% Similarity=0.073 Sum_probs=98.5
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH 176 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~ 176 (330)
+.++...+.+.+.... ...++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++++..++. ..++.
T Consensus 42 ~~~~~~~~~~~l~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~~ 114 (273)
T 3bus_A 42 VDDATDRLTDEMIALL---DVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGL----ANRVT 114 (273)
T ss_dssp HHHHHHHHHHHHHHHS---CCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTC----TTTEE
T ss_pred HHHHHHHHHHHHHHhc---CCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCC----CcceE
Confidence 3445666777777764 4457889999999999999998875 78999999999999999999988764 35688
Q ss_pred EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 177 VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 177 v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+...|+.+... ...+||+|++.+++++......+++.+.++|+++ +.+++.
T Consensus 115 ~~~~d~~~~~~-----------------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--G~l~i~ 165 (273)
T 3bus_A 115 FSYADAMDLPF-----------------------EDASFDAVWALESLHHMPDRGRALREMARVLRPG--GTVAIA 165 (273)
T ss_dssp EEECCTTSCCS-----------------------CTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE--EEEEEE
T ss_pred EEECccccCCC-----------------------CCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC--eEEEEE
Confidence 88888765311 1257999999999999988999999999999876 444443
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.4e-11 Score=108.29 Aligned_cols=119 Identities=10% Similarity=0.015 Sum_probs=92.6
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
..+...++... ....++.+|||+|||+|..++.+++.+. +|+++|+++.+++.+++|+..++. ..++.+...|
T Consensus 31 ~~~~~~~l~~l--~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~~d 104 (257)
T 3f4k_A 31 PEATRKAVSFI--NELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANC----ADRVKGITGS 104 (257)
T ss_dssp HHHHHHHHTTS--CCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECC
T ss_pred HHHHHHHHHHH--hcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCC----CCceEEEECC
Confidence 34444444432 2345678999999999999999998854 999999999999999999998774 3568999988
Q ss_pred CCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 182 WMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 182 W~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
+.+... ..++||+|++..++++. ..+.+++.+.++|+++ +.+++..
T Consensus 105 ~~~~~~-----------------------~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pg--G~l~~~~ 150 (257)
T 3f4k_A 105 MDNLPF-----------------------QNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKG--GFIAVSE 150 (257)
T ss_dssp TTSCSS-----------------------CTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEE--EEEEEEE
T ss_pred hhhCCC-----------------------CCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCC--cEEEEEE
Confidence 855310 13589999999999988 6889999999999875 4455543
|
| >3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.30 E-value=2.8e-11 Score=105.56 Aligned_cols=116 Identities=14% Similarity=0.259 Sum_probs=92.5
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
.+++.+.... . .++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++.|+..++. ..++.+...|+
T Consensus 31 ~~~~~~~~~~---~-~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~ 102 (219)
T 3dlc_A 31 IIAENIINRF---G-ITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANL----NDRIQIVQGDV 102 (219)
T ss_dssp HHHHHHHHHH---C-CCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECBT
T ss_pred HHHHHHHHhc---C-CCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccc----cCceEEEEcCH
Confidence 3455555543 2 23349999999999999999987 67999999999999999999988764 35788888887
Q ss_pred CCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 183 MNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.+..- ...+||+|++..++++......+++.+.++|+++ +.+++.
T Consensus 103 ~~~~~-----------------------~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg--G~l~~~ 147 (219)
T 3dlc_A 103 HNIPI-----------------------EDNYADLIVSRGSVFFWEDVATAFREIYRILKSG--GKTYIG 147 (219)
T ss_dssp TBCSS-----------------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--EEEEEE
T ss_pred HHCCC-----------------------CcccccEEEECchHhhccCHHHHHHHHHHhCCCC--CEEEEE
Confidence 65310 1258999999999999999999999999999875 555554
|
| >3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=4.3e-11 Score=115.45 Aligned_cols=123 Identities=19% Similarity=0.215 Sum_probs=96.6
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
+.+.+..|.+++..... ....++.+|||||||+|..++.+++.+.+|+++|+++.+++.+++|+..|+. .+.+
T Consensus 212 ~d~~t~~ll~~l~~~l~-~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~------~v~~ 284 (381)
T 3dmg_A 212 VDPASLLLLEALQERLG-PEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANAL------KAQA 284 (381)
T ss_dssp CCHHHHHHHHHHHHHHC-TTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTC------CCEE
T ss_pred CCHHHHHHHHHHHHhhc-ccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC------CeEE
Confidence 44567777777765421 1245788999999999999999999999999999999999999999999873 3677
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC-----cccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS-----DDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~-----~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...|+.+... ...+||+|++..+++. ......+++.+.++|+++ +.+++.
T Consensus 285 ~~~D~~~~~~-----------------------~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpG--G~l~iv 339 (381)
T 3dmg_A 285 LHSDVDEALT-----------------------EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPG--GVFFLV 339 (381)
T ss_dssp EECSTTTTSC-----------------------TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred EEcchhhccc-----------------------cCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcC--cEEEEE
Confidence 7777665421 1258999999888876 567788999999999875 455554
|
| >2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=3.3e-11 Score=103.86 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=83.1
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++.+|||+|||+|..++.++..+.+|+++|+++.+++.+++|+..++. .++.+...|+.+..
T Consensus 30 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~d~~~~~----------- 93 (199)
T 2xvm_A 30 VVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENL-----DNLHTRVVDLNNLT----------- 93 (199)
T ss_dssp TSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----TTEEEEECCGGGCC-----------
T ss_pred ccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCC-----CCcEEEEcchhhCC-----------
Confidence 35678999999999999999999999999999999999999999988763 45788877765531
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLG 244 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~ 244 (330)
...+||+|++..++++.. ....+++.+.++|+++
T Consensus 94 -------------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~g 129 (199)
T 2xvm_A 94 -------------FDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG 129 (199)
T ss_dssp -------------CCCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEE
T ss_pred -------------CCCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCC
Confidence 125799999999998765 7899999999999875
|
| >3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.9e-11 Score=106.35 Aligned_cols=106 Identities=18% Similarity=0.221 Sum_probs=80.8
Q ss_pred CCCCeEEEEcCc-cCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAG-TGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~G-tGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
-++.+|||+||| +|..++.+++. +.+|+++|+++.+++.+++|+..|+ . ++.+...|+....+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~-~v~~~~~d~~~~~~--------- 118 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNN-----S-NVRLVKSNGGIIKG--------- 118 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTT-----C-CCEEEECSSCSSTT---------
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhC-----C-CcEEEeCCchhhhh---------
Confidence 467899999999 99999999998 8999999999999999999999987 2 67888888643211
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcc-------------------cHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDD-------------------LTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~-------------------~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
+ ..++||+|++...++... ....+++.+.++|+++ +.+++...
T Consensus 119 ------------~-~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~~ 180 (230)
T 3evz_A 119 ------------V-VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG--GKVALYLP 180 (230)
T ss_dssp ------------T-CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE--EEEEEEEE
T ss_pred ------------c-ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC--eEEEEEec
Confidence 0 125899999765544322 2478899999999875 45555433
|
| >3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.5e-11 Score=106.45 Aligned_cols=120 Identities=10% Similarity=0.048 Sum_probs=92.5
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
-|-....+..++.... ...++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|+..+ .++.+
T Consensus 32 ~~~~~~~~~~~l~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~ 101 (216)
T 3ofk_A 32 NPFERERHTQLLRLSL---SSGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRW-------SHISW 101 (216)
T ss_dssp CHHHHHHHHHHHHHHT---TTSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTC-------SSEEE
T ss_pred CHhHHHHHHHHHHHHc---ccCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccC-------CCeEE
Confidence 3444445555555442 3456789999999999999999999899999999999999999987642 46888
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccH---HHHHHHHHHhccCCCCeEEEEEe
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLT---DALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~---~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
...|+.+.. ..++||+|++..++++.... ..+++.+.++|+++ +.++++.
T Consensus 102 ~~~d~~~~~------------------------~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg--G~l~~~~ 154 (216)
T 3ofk_A 102 AATDILQFS------------------------TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPG--GHLVFGS 154 (216)
T ss_dssp EECCTTTCC------------------------CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEE--EEEEEEE
T ss_pred EEcchhhCC------------------------CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCC--CEEEEEe
Confidence 888877642 13589999999999987765 56689999999775 5566644
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=99.28 E-value=3.8e-11 Score=108.53 Aligned_cols=104 Identities=13% Similarity=0.010 Sum_probs=86.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..+..++..+.+|+++|+++.+++.+++++..++. .++.+...|..+..-
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-----~~v~~~~~d~~~l~~----------- 99 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH-----QQVEYVQGDAEQMPF----------- 99 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECCC-CCCS-----------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC-----CceEEEEecHHhCCC-----------
Confidence 4678999999999999999999888999999999999999999987762 468888877655310
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
..+.||+|+++.++++......+++.+.++|+++ +.+++.
T Consensus 100 ------------~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg--G~l~~~ 139 (260)
T 1vl5_A 100 ------------TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG--GQLLLV 139 (260)
T ss_dssp ------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--EEEEEE
T ss_pred ------------CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC--CEEEEE
Confidence 1258999999999999999999999999999875 445443
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=5.9e-11 Score=108.63 Aligned_cols=107 Identities=16% Similarity=0.228 Sum_probs=84.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh----CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV----AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~----~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
-+|.+|||||||||..++.+++. +.+|+++|+++.||+.+++++...+. ..++++...|..+.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~----~~~v~~~~~D~~~~--------- 135 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA----PTPVDVIEGDIRDI--------- 135 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC----SSCEEEEESCTTTC---------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc----CceEEEeecccccc---------
Confidence 46789999999999999999886 46999999999999999999987553 46788888776543
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
..++||+|++.-++++.. ....+++.+.++|+|| +.++++-..+
T Consensus 136 ----------------~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG--G~lii~e~~~ 181 (261)
T 4gek_A 136 ----------------AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPG--GALVLSEKFS 181 (261)
T ss_dssp ----------------CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEEEEBC
T ss_pred ----------------cccccccceeeeeeeecCchhHhHHHHHHHHHcCCC--cEEEEEeccC
Confidence 124699999999998754 3457899999999875 5566654333
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=99.28 E-value=9.8e-11 Score=102.11 Aligned_cols=102 Identities=12% Similarity=0.137 Sum_probs=83.5
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
...++.+|||+|||+|..++.+++.+ .+|+++|+++.+++.+++|+..++ ..++.+...|+.+..+
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~v~~~~~d~~~~~~------- 104 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV-----ARNVTLVEAFAPEGLD------- 104 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT-----CTTEEEEECCTTTTCT-------
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEEeCChhhhhh-------
Confidence 34568899999999999999999986 899999999999999999999887 3568888887755321
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
....||+|++..+++ ....+++.+.++|++++ .+++
T Consensus 105 ----------------~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG--~l~~ 140 (204)
T 3e05_A 105 ----------------DLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEG--VIVL 140 (204)
T ss_dssp ----------------TSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTC--EEEE
T ss_pred ----------------cCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCe--EEEE
Confidence 124799999988776 77899999999998764 4444
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.6e-11 Score=101.18 Aligned_cols=101 Identities=13% Similarity=0.114 Sum_probs=77.6
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++. ..++ +...|..+.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~-~~~~d~~~~---------- 87 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV----SDRI-AVQQGAPRA---------- 87 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC----TTSE-EEECCTTGG----------
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC----CCCE-EEecchHhh----------
Confidence 456789999999999999999987 67999999999999999999988763 2356 555554322
Q ss_pred CccccccccCccchhcc-CCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 196 SASQERYSWNSSELKEV-QRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~-~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+... ..||+|+++.++++ ..+++.+.++|++++ .+++.
T Consensus 88 -------------~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG--~l~~~ 126 (178)
T 3hm2_A 88 -------------FDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGG--RLVAN 126 (178)
T ss_dssp -------------GGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTC--EEEEE
T ss_pred -------------hhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCC--EEEEE
Confidence 1111 58999999998887 778899999998764 44443
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=4e-11 Score=108.04 Aligned_cols=121 Identities=12% Similarity=0.116 Sum_probs=96.0
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH 176 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~ 176 (330)
+++.+..+++.++... ...++.+|||+|||+|..++.+++. +.+|+++|+++.+++.++.++..+ .++.
T Consensus 36 ~~~~~~~~~~~~~~~~---~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~ 105 (266)
T 3ujc_A 36 ISSGGLEATKKILSDI---ELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-------NKII 105 (266)
T ss_dssp CSTTHHHHHHHHTTTC---CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-------TTEE
T ss_pred cccchHHHHHHHHHhc---CCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-------CCeE
Confidence 5566666777776653 4457889999999999999999987 899999999999999998876442 4678
Q ss_pred EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 177 VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 177 v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
+...|+.+... ..++||+|++..++++. .....+++.+.++|+++ +.+++..
T Consensus 106 ~~~~d~~~~~~-----------------------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg--G~l~~~~ 159 (266)
T 3ujc_A 106 FEANDILTKEF-----------------------PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT--GTLLITD 159 (266)
T ss_dssp EEECCTTTCCC-----------------------CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEEE
T ss_pred EEECccccCCC-----------------------CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC--CEEEEEE
Confidence 88888765411 13589999999999998 89999999999999875 4455543
|
| >3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=4.4e-11 Score=108.67 Aligned_cols=105 Identities=14% Similarity=0.066 Sum_probs=87.5
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..++.+|||+|||+|..++.+++.+ .+|+++|+++.+++.+++|+..++. ..++.+...|+.+...
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~--------- 110 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGL----QNRVTGIVGSMDDLPF--------- 110 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCTTSCCC---------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCC----CcCcEEEEcChhhCCC---------
Confidence 4568999999999999999999885 4999999999999999999988764 3679999999865421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
..++||+|++..++++. ....+++.+.++|+++ +.+++.
T Consensus 111 --------------~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~Lkpg--G~l~~~ 149 (267)
T 3kkz_A 111 --------------RNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKG--GYLAVS 149 (267)
T ss_dssp --------------CTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEE--EEEEEE
T ss_pred --------------CCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCC--CEEEEE
Confidence 13589999999999988 6889999999999875 445444
|
| >1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 | Back alignment and structure |
|---|
Probab=99.27 E-value=5.3e-11 Score=101.68 Aligned_cols=107 Identities=15% Similarity=0.202 Sum_probs=85.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|+..++.. ..++.+...|+.+..+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~---~~~~~~~~~d~~~~~~----------- 116 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLD---NYDIRVVHSDLYENVK----------- 116 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCT---TSCEEEEECSTTTTCT-----------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCC---ccceEEEECchhcccc-----------
Confidence 37789999999999999999988899999999999999999999987631 1148888888776421
Q ss_pred ccccccCccchhccCCeeEEEEeccccC-cccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYS-DDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~-~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
..+||+|++..++++ ......+++.+.++|+++ +.+++...
T Consensus 117 -------------~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~g--G~l~~~~~ 158 (194)
T 1dus_A 117 -------------DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN--GEIWVVIQ 158 (194)
T ss_dssp -------------TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE--EEEEEEEE
T ss_pred -------------cCCceEEEECCCcccchhHHHHHHHHHHHHcCCC--CEEEEEEC
Confidence 247999999877665 467788999999999775 55555443
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=9.2e-11 Score=109.34 Aligned_cols=105 Identities=13% Similarity=0.034 Sum_probs=87.8
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
...+.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++. ..++.+...|..+..-
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~--------- 181 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRI----DDHVRSRVCNMLDTPF--------- 181 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCTTSCCC---------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCC----CCceEEEECChhcCCC---------
Confidence 456889999999999999999988 89999999999999999999998874 3578888888765310
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
..+.||+|++.+++++.+ ...+++.+.++|+++ +.+++.
T Consensus 182 --------------~~~~fD~V~~~~~l~~~~-~~~~l~~~~~~Lkpg--G~l~~~ 220 (312)
T 3vc1_A 182 --------------DKGAVTASWNNESTMYVD-LHDLFSEHSRFLKVG--GRYVTI 220 (312)
T ss_dssp --------------CTTCEEEEEEESCGGGSC-HHHHHHHHHHHEEEE--EEEEEE
T ss_pred --------------CCCCEeEEEECCchhhCC-HHHHHHHHHHHcCCC--cEEEEE
Confidence 125899999999999885 999999999999876 444443
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=3.5e-11 Score=103.08 Aligned_cols=117 Identities=9% Similarity=-0.005 Sum_probs=81.7
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
...++..++.. ...+|.+|||+|||+|..++.+|+.+.+|+++|+++.+++.+++|+..++. .++.+...+
T Consensus 8 ~~~~~~~~l~~----~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~-----~~v~~~~~~ 78 (185)
T 3mti_A 8 PIHMSHDFLAE----VLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGI-----ENTELILDG 78 (185)
T ss_dssp HHHHHHHHHHT----TCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTC-----CCEEEEESC
T ss_pred HHHHHHHHHHH----hCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEeCc
Confidence 34455544443 334688999999999999999999999999999999999999999998863 567766643
Q ss_pred CCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEec-ccc--------CcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 182 WMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAAD-VIY--------SDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 182 W~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaD-viY--------~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
...... . ..++||+|+++- .+. .......+++.+.++|+++ +.+++
T Consensus 79 ~~~l~~---------------------~-~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~i 133 (185)
T 3mti_A 79 HENLDH---------------------Y-VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG--GRLAI 133 (185)
T ss_dssp GGGGGG---------------------T-CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE--EEEEE
T ss_pred HHHHHh---------------------h-ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC--cEEEE
Confidence 322100 0 135799998762 211 2244557788899999876 44444
|
| >4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.9e-11 Score=110.97 Aligned_cols=108 Identities=16% Similarity=0.168 Sum_probs=89.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..++.++..+.+|+++|+++.+++.+++++..++. ..++.+...|+.+..+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~----------- 131 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGV----SDNMQFIHCAAQDVAS----------- 131 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CC----GGGEEEEESCGGGTGG-----------
T ss_pred CCCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC----CcceEEEEcCHHHhhh-----------
Confidence 3478999999999999999999999999999999999999999987763 3678888888765421
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
...++||+|++..++++......+++.+.++|+++ +.+++...
T Consensus 132 -----------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg--G~l~~~~~ 174 (285)
T 4htf_A 132 -----------HLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPG--GVLSLMFY 174 (285)
T ss_dssp -----------GCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE--EEEEEEEE
T ss_pred -----------hcCCCceEEEECchhhcccCHHHHHHHHHHHcCCC--eEEEEEEe
Confidence 02358999999999999999999999999999875 55555543
|
| >1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=99.27 E-value=7.1e-11 Score=103.98 Aligned_cols=115 Identities=14% Similarity=0.111 Sum_probs=89.3
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
...+.+.+.... -.+.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|+..++ .++.+...|
T Consensus 25 ~~~~~~~l~~~~-----~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d 93 (227)
T 1ve3_A 25 IETLEPLLMKYM-----KKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE------SNVEFIVGD 93 (227)
T ss_dssp HHHHHHHHHHSC-----CSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECC
T ss_pred HHHHHHHHHHhc-----CCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC------CCceEEECc
Confidence 334455555432 237899999999999999999998899999999999999999998875 457778777
Q ss_pred CCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEecc--ccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 182 WMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADV--IYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 182 W~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDv--iY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
..+... ..++||+|++.++ +++......+++.+.++|+++ +.+++.
T Consensus 94 ~~~~~~-----------------------~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~g--G~l~~~ 141 (227)
T 1ve3_A 94 ARKLSF-----------------------EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPS--GKFIMY 141 (227)
T ss_dssp TTSCCS-----------------------CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred hhcCCC-----------------------CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCC--cEEEEE
Confidence 665310 1247999999999 776677889999999999875 444443
|
| >2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.1e-11 Score=104.17 Aligned_cols=128 Identities=13% Similarity=0.168 Sum_probs=91.3
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
....+.+.+.... ....++.+|||+|||+|..++.+++.+ .+|+++|+++.+++.+++|+..|+. ..++.+..
T Consensus 27 ~~~~~~~~~~~~l--~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~ 100 (187)
T 2fhp_A 27 TTDKVKESIFNMI--GPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKE----PEKFEVRK 100 (187)
T ss_dssp CCHHHHHHHHHHH--CSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEE
T ss_pred CHHHHHHHHHHHH--HhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCC----CcceEEEE
Confidence 3444555555543 233578899999999999999888875 6999999999999999999999863 35688888
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHH--HHhccCCCCeEEEEEeeee
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTL--KRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl--~~lL~~~~~~~i~va~~~R 256 (330)
.|+.+..+. ......+||+|++..+ |.....+.+++.+ .++|+++ +.+++.....
T Consensus 101 ~d~~~~~~~-------------------~~~~~~~fD~i~~~~~-~~~~~~~~~~~~l~~~~~L~~g--G~l~~~~~~~ 157 (187)
T 2fhp_A 101 MDANRALEQ-------------------FYEEKLQFDLVLLDPP-YAKQEIVSQLEKMLERQLLTNE--AVIVCETDKT 157 (187)
T ss_dssp SCHHHHHHH-------------------HHHTTCCEEEEEECCC-GGGCCHHHHHHHHHHTTCEEEE--EEEEEEEETT
T ss_pred CcHHHHHHH-------------------HHhcCCCCCEEEECCC-CCchhHHHHHHHHHHhcccCCC--CEEEEEeCCc
Confidence 776542100 0001357999998766 6667778888888 6677654 5666654443
|
| >3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=99.26 E-value=1e-10 Score=105.17 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=84.7
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
...++++|||+|||+|..+..+++.+. +|+++|+++.+++.+++++. ..++.+...|..+...
T Consensus 41 ~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~~d~~~~~~-------- 104 (253)
T 3g5l_A 41 PDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--------SPVVCYEQKAIEDIAI-------- 104 (253)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--------CTTEEEEECCGGGCCC--------
T ss_pred hccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--------cCCeEEEEcchhhCCC--------
Confidence 345789999999999999999999876 99999999999999998865 1467777777654310
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|+++.++++......+++.+.++|+++ +.++++
T Consensus 105 ---------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg--G~l~~~ 144 (253)
T 3g5l_A 105 ---------------EPDAYNVVLSSLALHYIASFDDICKKVYINLKSS--GSFIFS 144 (253)
T ss_dssp ---------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--EEEEEE
T ss_pred ---------------CCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCC--cEEEEE
Confidence 1358999999999999999999999999999875 455554
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1e-10 Score=108.31 Aligned_cols=108 Identities=13% Similarity=0.094 Sum_probs=88.5
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
..+.+.... ..-++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++++..++. ..++.+...|+.
T Consensus 60 ~~~~~~~~~---~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~ 132 (302)
T 3hem_A 60 KRKLALDKL---NLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDS----PRRKEVRIQGWE 132 (302)
T ss_dssp HHHHHHHTT---CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCC----SSCEEEEECCGG
T ss_pred HHHHHHHHc---CCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEECCHH
Confidence 444555542 3456889999999999999999988 89999999999999999999988764 357888888875
Q ss_pred CCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc---------ccHHHHHHHHHHhccCCC
Q 020158 184 NPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD---------DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~---------~~~~~l~~tl~~lL~~~~ 245 (330)
+. .++||+|++..++++. .....+++.+.++|++++
T Consensus 133 ~~--------------------------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG 177 (302)
T 3hem_A 133 EF--------------------------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDG 177 (302)
T ss_dssp GC--------------------------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTC
T ss_pred Hc--------------------------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCc
Confidence 42 2579999999999876 455899999999998864
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-10 Score=106.85 Aligned_cols=124 Identities=15% Similarity=0.103 Sum_probs=95.2
Q ss_pred hHHHHHHHHhhhcC-CCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEE
Q 020158 101 AELVLADFVMHKMC-TSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVR 178 (330)
Q Consensus 101 aa~~La~~l~~~~~-~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~ 178 (330)
+...+.+.+..... .....++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++++..++. ..++.+.
T Consensus 62 ~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~~~~ 137 (297)
T 2o57_A 62 ASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGL----ADNITVK 137 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTC----TTTEEEE
T ss_pred HHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCC----CcceEEE
Confidence 34444555554420 003356789999999999999999887 88999999999999999999987764 3578888
Q ss_pred EecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 179 DLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 179 ~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
..|+.+... ..++||+|++.+++++......+++.+.++|+++ +.+++..
T Consensus 138 ~~d~~~~~~-----------------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg--G~l~~~~ 187 (297)
T 2o57_A 138 YGSFLEIPC-----------------------EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR--GVMAITD 187 (297)
T ss_dssp ECCTTSCSS-----------------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--EEEEEEE
T ss_pred EcCcccCCC-----------------------CCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCC--eEEEEEE
Confidence 888766310 1257999999999999888999999999999875 4455443
|
| >3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A | Back alignment and structure |
|---|
Probab=99.25 E-value=5.4e-11 Score=104.62 Aligned_cols=109 Identities=14% Similarity=-0.000 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||+|||+|..+..+++.+ .+|+++|+++.+++.+++|+..++.......++.+...|+....
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---------- 97 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD---------- 97 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC----------
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc----------
Confidence 467899999999999999999875 69999999999999999999776531000126888888764321
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...++||+|++.+++++.. ....+++.+.++|+++ +++++.
T Consensus 98 -------------~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--G~li~~ 140 (217)
T 3jwh_A 98 -------------KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPK--IVIVTT 140 (217)
T ss_dssp -------------GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCS--EEEEEE
T ss_pred -------------ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCC--EEEEEc
Confidence 0235899999999999776 4489999999999876 444443
|
| >2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.7e-11 Score=101.18 Aligned_cols=111 Identities=8% Similarity=0.051 Sum_probs=85.4
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
..+.+++.... ...++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|+..++. .++.+...|+
T Consensus 21 ~~~~~~~~~~~---~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~d~ 92 (183)
T 2yxd_A 21 EEIRAVSIGKL---NLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNI-----KNCQIIKGRA 92 (183)
T ss_dssp HHHHHHHHHHH---CCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTC-----CSEEEEESCH
T ss_pred HHHHHHHHHHc---CCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCC-----CcEEEEECCc
Confidence 34455555543 345778999999999999999999788999999999999999999998873 4678877776
Q ss_pred CCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 183 MNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
.+. + ....||+|++..+ .....+++.+.++ + ++.+++..
T Consensus 93 ~~~-----------------------~-~~~~~D~i~~~~~----~~~~~~l~~~~~~--~--gG~l~~~~ 131 (183)
T 2yxd_A 93 EDV-----------------------L-DKLEFNKAFIGGT----KNIEKIIEILDKK--K--INHIVANT 131 (183)
T ss_dssp HHH-----------------------G-GGCCCSEEEECSC----SCHHHHHHHHHHT--T--CCEEEEEE
T ss_pred ccc-----------------------c-cCCCCcEEEECCc----ccHHHHHHHHhhC--C--CCEEEEEe
Confidence 542 1 1247999999988 6778888888888 4 34555543
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.4e-10 Score=106.40 Aligned_cols=112 Identities=17% Similarity=0.187 Sum_probs=89.9
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHH-HhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLS-RVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA-~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
+...+.+.++... ...++.+|||+|||+|..++.++ ..+.+|+++|+++.+++.+++++..++. ..++.+..
T Consensus 48 a~~~~~~~~~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~----~~~~~~~~ 120 (287)
T 1kpg_A 48 AQIAKIDLALGKL---GLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSEN----LRSKRVLL 120 (287)
T ss_dssp HHHHHHHHHHTTT---TCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCC----CSCEEEEE
T ss_pred HHHHHHHHHHHHc---CCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC----CCCeEEEE
Confidence 4444566666553 34568899999999999999888 5588999999999999999999987653 35788887
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCC
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~ 245 (330)
.|+.+. .++||+|++.+++++. .....+++.+.++|++++
T Consensus 121 ~d~~~~--------------------------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG 162 (287)
T 1kpg_A 121 AGWEQF--------------------------DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADG 162 (287)
T ss_dssp SCGGGC--------------------------CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTC
T ss_pred CChhhC--------------------------CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCC
Confidence 776432 1479999999999887 678999999999998864
|
| >2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=99.25 E-value=8.5e-11 Score=105.16 Aligned_cols=104 Identities=14% Similarity=0.008 Sum_probs=82.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 120 NGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
++.+|||+|||+|..++.++.. +.+|+++|+++.+++.+++|+..++ ..++.+...|+.+...
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~~~d~~~~~~----------- 142 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-----KRVRNYFCCGLQDFTP----------- 142 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-----GGEEEEEECCGGGCCC-----------
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC-----CceEEEEEcChhhcCC-----------
Confidence 5789999999999999988877 4699999999999999999987764 2467777777654311
Q ss_pred ccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCCCeEEEEEe
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
..++||+|++..++++... ...+++.+.++|+++ +.+++..
T Consensus 143 ------------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--G~l~i~~ 185 (241)
T 2ex4_A 143 ------------EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN--GIIVIKD 185 (241)
T ss_dssp ------------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEEE
T ss_pred ------------CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCC--eEEEEEE
Confidence 1247999999999988765 558999999999875 4555543
|
| >3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.24 E-value=7e-11 Score=107.62 Aligned_cols=118 Identities=17% Similarity=0.166 Sum_probs=94.0
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
...+.+++.... ...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++.|+..++. .++.+..
T Consensus 22 ~~~l~~~l~~~~---~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~ 93 (276)
T 3mgg_A 22 AETLEKLLHHDT---VYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGI-----KNVKFLQ 93 (276)
T ss_dssp -CHHHHHHHTTC---CCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEE
T ss_pred HHHHHHHHhhcc---cCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEE
Confidence 445666665542 4457899999999999999999988 67999999999999999999988763 4688888
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.|..+... ..++||+|++..++++......+++.+.++|+++ +.+++.
T Consensus 94 ~d~~~~~~-----------------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--G~l~~~ 141 (276)
T 3mgg_A 94 ANIFSLPF-----------------------EDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPG--GTITVI 141 (276)
T ss_dssp CCGGGCCS-----------------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--EEEEEE
T ss_pred cccccCCC-----------------------CCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCC--cEEEEE
Confidence 77664311 1358999999999999999999999999999875 445443
|
| >3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.24 E-value=6.1e-11 Score=108.78 Aligned_cols=97 Identities=13% Similarity=0.159 Sum_probs=82.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|+..++ .++.+...|..+..
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~------------ 180 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKEN------LNISTALYDINAAN------------ 180 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCGGGCC------------
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcC------CceEEEEecccccc------------
Confidence 378899999999999999999999999999999999999999999876 26788877765531
Q ss_pred ccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~ 245 (330)
..++||+|+++.++++. .....+++.+.++|++++
T Consensus 181 ------------~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 217 (286)
T 3m70_A 181 ------------IQENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGG 217 (286)
T ss_dssp ------------CCSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEE
T ss_pred ------------ccCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCc
Confidence 13589999999999854 567799999999998763
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=99.23 E-value=9.7e-11 Score=102.08 Aligned_cols=115 Identities=12% Similarity=0.146 Sum_probs=89.7
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH 176 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~ 176 (330)
.++....+.+++.... .++.+|||+|||+|..++.+++.+. +|+++|+++.+++.+++|+..++. .++.
T Consensus 43 ~~~~~~~~~~~l~~~~-----~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~ 112 (205)
T 3grz_A 43 NHQTTQLAMLGIERAM-----VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGI-----YDIA 112 (205)
T ss_dssp CHHHHHHHHHHHHHHC-----SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----CCCE
T ss_pred CCccHHHHHHHHHHhc-----cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceE
Confidence 4567777777776542 3678999999999999999998864 999999999999999999998873 3488
Q ss_pred EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 177 VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 177 v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+...|+.+.. ..+||+|++..++. ....+++.+.++|+++ +.++++
T Consensus 113 ~~~~d~~~~~-------------------------~~~fD~i~~~~~~~---~~~~~l~~~~~~L~~g--G~l~~~ 158 (205)
T 3grz_A 113 LQKTSLLADV-------------------------DGKFDLIVANILAE---ILLDLIPQLDSHLNED--GQVIFS 158 (205)
T ss_dssp EEESSTTTTC-------------------------CSCEEEEEEESCHH---HHHHHGGGSGGGEEEE--EEEEEE
T ss_pred EEeccccccC-------------------------CCCceEEEECCcHH---HHHHHHHHHHHhcCCC--CEEEEE
Confidence 8888876531 25799999986553 3577888888888765 455554
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=99.23 E-value=4.7e-11 Score=104.76 Aligned_cols=114 Identities=10% Similarity=0.114 Sum_probs=82.3
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCC--------CCCCCee
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGV--------FSHQGSV 175 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~--------~~~~~~v 175 (330)
.|.+|+... ...++.+|||+|||+|..++.+|+.|.+|+++|+++.|++.++++...+... .. ..++
T Consensus 10 ~l~~~~~~l----~~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~-~~~v 84 (203)
T 1pjz_A 10 DLQQYWSSL----NVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYA-APGI 84 (203)
T ss_dssp HHHHHHHHH----CCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEE-CSSS
T ss_pred HHHHHHHhc----ccCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCccccccccccccc-CCcc
Confidence 455665433 2346789999999999999999999999999999999999999876431000 00 2457
Q ss_pred EEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCC
Q 020158 176 HVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLG 244 (330)
Q Consensus 176 ~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~ 244 (330)
++...|..+.. ....++||+|++..++++.. ....+++.+.++|++|
T Consensus 85 ~~~~~d~~~l~----------------------~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg 133 (203)
T 1pjz_A 85 EIWCGDFFALT----------------------ARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA 133 (203)
T ss_dssp EEEEECCSSST----------------------HHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE
T ss_pred EEEECccccCC----------------------cccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC
Confidence 77777755431 11115799999988887543 4556899999999876
|
| >3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.6e-10 Score=106.85 Aligned_cols=105 Identities=8% Similarity=-0.013 Sum_probs=84.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHH---hCCeEEEEeCchHHHHHHHHHHHHc-cCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSR---VAWTVFLTDHGNYILDNCAKNVQLN-SGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~---~~~~V~~TD~~~~~L~~~~~Nv~~N-~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
-++.+|||+|||+|..++.++. .+.+|+++|+++.+++.+++|+..+ +. ..++.+...|+.+....
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----~~~v~~~~~d~~~~~~~------ 104 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT----YKNVSFKISSSDDFKFL------ 104 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C----CTTEEEEECCTTCCGGG------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC----CCceEEEEcCHHhCCcc------
Confidence 3688999999999999999994 4789999999999999999999886 21 36788998888763100
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
.......++||+|+++.++++. ....+++.+.++|++|+
T Consensus 105 -----------~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG 143 (299)
T 3g5t_A 105 -----------GADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDG 143 (299)
T ss_dssp -----------CTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEE
T ss_pred -----------ccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCc
Confidence 0000012589999999999999 99999999999998763
|
| >2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A | Back alignment and structure |
|---|
Probab=99.22 E-value=5.8e-11 Score=105.52 Aligned_cols=103 Identities=15% Similarity=0.114 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..+..++..+.+|+++|+++.+++.+++++. .++.+...|..+..
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~---------~~v~~~~~d~~~~~------------ 99 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLK---------DGITYIHSRFEDAQ------------ 99 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSC---------SCEEEEESCGGGCC------------
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhh---------CCeEEEEccHHHcC------------
Confidence 577899999999999999999988899999999999999987752 25667766654431
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHH-HhccCCCCeEEEEEeeee
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLK-RLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~-~lL~~~~~~~i~va~~~R 256 (330)
..++||+|++..++++......+++.+. ++|+++ +.+++....+
T Consensus 100 ------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~Lkpg--G~l~i~~~~~ 144 (250)
T 2p7i_A 100 ------------LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEG--GRLFLVCPNA 144 (250)
T ss_dssp ------------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEE--EEEEEEEECT
T ss_pred ------------cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCC--CEEEEEcCCh
Confidence 1357999999999999888899999999 999875 5566655443
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.3e-10 Score=106.69 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=89.4
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEe
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDL 180 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~l 180 (330)
...+.+.+.... ...++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++++..++. ..++.+...
T Consensus 75 ~~~~~~~~~~~~---~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~ 147 (318)
T 2fk8_A 75 QYAKVDLNLDKL---DLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDT----NRSRQVLLQ 147 (318)
T ss_dssp HHHHHHHHHTTS---CCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCC----SSCEEEEES
T ss_pred HHHHHHHHHHhc---CCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEEC
Confidence 344555665543 3457889999999999999999987 88999999999999999999987653 356777777
Q ss_pred cCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCC
Q 020158 181 NWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 181 dW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~ 245 (330)
|+.+. .++||+|++..++++. .....+++.+.++|++++
T Consensus 148 d~~~~--------------------------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG 188 (318)
T 2fk8_A 148 GWEDF--------------------------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADG 188 (318)
T ss_dssp CGGGC--------------------------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTC
T ss_pred ChHHC--------------------------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCc
Confidence 75432 1479999999999886 688999999999998864
|
| >3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.21 E-value=6.2e-11 Score=103.66 Aligned_cols=100 Identities=16% Similarity=0.213 Sum_probs=78.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
-++.+|||+|||+|..+..+++.+.+|+++|+++.+++.+++++ + +.+...+.....
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~--~---------~~~~~~d~~~~~------------ 98 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL--G---------RPVRTMLFHQLD------------ 98 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--T---------SCCEECCGGGCC------------
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc--C---------CceEEeeeccCC------------
Confidence 35789999999999999999999999999999999999999887 2 122333333221
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
..++||+|++..++++.. ....+++.+.++|+++ +.++++...
T Consensus 99 ------------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~~~ 143 (211)
T 3e23_A 99 ------------AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPG--GLFYASYKS 143 (211)
T ss_dssp ------------CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEEEEC
T ss_pred ------------CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCC--cEEEEEEcC
Confidence 235899999999999876 7789999999999875 556665443
|
| >2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=99.21 E-value=3.3e-11 Score=105.55 Aligned_cols=111 Identities=15% Similarity=0.132 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.++.+|||+|||+|..++.++..+ .+|+++|+++.+++.+++|+..|+.. ..++.+...|..+..+..
T Consensus 52 ~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---~~~v~~~~~d~~~~~~~~-------- 120 (201)
T 2ift_A 52 IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCS---SEQAEVINQSSLDFLKQP-------- 120 (201)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC---TTTEEEECSCHHHHTTSC--------
T ss_pred cCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCC---ccceEEEECCHHHHHHhh--------
Confidence 367899999999999999877765 59999999999999999999988731 146777776654321100
Q ss_pred cccccccCccchhccCC-eeEEEEeccccCcccHHHHHHHH--HHhccCCCCeEEEEEeeee
Q 020158 198 SQERYSWNSSELKEVQR-ASVLLAADVIYSDDLTDALFHTL--KRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~-~DlIlaaDviY~~~~~~~l~~tl--~~lL~~~~~~~i~va~~~R 256 (330)
...+ ||+|++... |.....+.+++.+ .++|+++ +.++++...+
T Consensus 121 -------------~~~~~fD~I~~~~~-~~~~~~~~~l~~~~~~~~Lkpg--G~l~i~~~~~ 166 (201)
T 2ift_A 121 -------------QNQPHFDVVFLDPP-FHFNLAEQAISLLCENNWLKPN--ALIYVETEKD 166 (201)
T ss_dssp -------------CSSCCEEEEEECCC-SSSCHHHHHHHHHHHTTCEEEE--EEEEEEEESS
T ss_pred -------------ccCCCCCEEEECCC-CCCccHHHHHHHHHhcCccCCC--cEEEEEECCC
Confidence 1247 999998766 6677778888888 4568664 5666655444
|
| >2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A | Back alignment and structure |
|---|
Probab=99.21 E-value=5.1e-10 Score=97.00 Aligned_cols=105 Identities=15% Similarity=0.106 Sum_probs=82.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++ +|||+|||+|..++.+++.+.+|+++|+++.+++.+++++..++ .++.+...|..+...
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~------------ 90 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKG------VKITTVQSNLADFDI------------ 90 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHT------CCEEEECCBTTTBSC------------
T ss_pred CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcC------CceEEEEcChhhcCC------------
Confidence 45 99999999999999999999999999999999999999998765 257777777654310
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
....||+|+++.+.+.......+++.+.++|+++ +.+++.....
T Consensus 91 -----------~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pg--G~l~~~~~~~ 134 (202)
T 2kw5_A 91 -----------VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPG--GVFILEGFAP 134 (202)
T ss_dssp -----------CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSS--EEEEEEEECT
T ss_pred -----------CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCC--cEEEEEEecc
Confidence 1257999999765554567888999999999775 5565554433
|
| >3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.21 E-value=9.8e-11 Score=107.29 Aligned_cols=106 Identities=11% Similarity=0.049 Sum_probs=77.8
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
...++.+|||||||+|..++.+|+.+.+|+++|+++.|++.+++|+..+ +...+|.+.....
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~-----------~v~~~~~~~~~~~------- 103 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADR-----------CVTIDLLDITAEI------- 103 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSS-----------CCEEEECCTTSCC-------
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhc-----------cceeeeeeccccc-------
Confidence 4457889999999999999999999999999999999999999987543 1223333321100
Q ss_pred ccccccccCccchhccCCeeEEEEeccccC--cccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYS--DDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
. ....++||+|+++.++++ ......+++.+.++| +| +.++++..
T Consensus 104 ------~-----~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG--G~l~lS~~ 149 (261)
T 3iv6_A 104 ------P-----KELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GS--GTVRASVK 149 (261)
T ss_dssp ------C-----GGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT--SEEEEEEE
T ss_pred ------c-----cccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC--cEEEEEec
Confidence 0 001358999999999864 345677889999999 65 46666654
|
| >3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-10 Score=106.68 Aligned_cols=104 Identities=10% Similarity=0.097 Sum_probs=86.9
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
...++.+|||+|||+|..++.++.. +.+|+++|+++.+++.+++++..+. .++.+...|..+..
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------~~v~~~~~d~~~~~------- 85 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP------YDSEFLEGDATEIE------- 85 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS------SEEEEEESCTTTCC-------
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEEcchhhcC-------
Confidence 3457899999999999999999987 5899999999999999999987654 47888888876531
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
..++||+|++..++++......+++.+.++|+++ +.+++.
T Consensus 86 -----------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg--G~l~~~ 125 (284)
T 3gu3_A 86 -----------------LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKG--GKIICF 125 (284)
T ss_dssp -----------------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEE--EEEEEE
T ss_pred -----------------cCCCeeEEEECChhhcCCCHHHHHHHHHHHcCCC--CEEEEE
Confidence 1247999999999999999999999999999875 445443
|
| >2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A | Back alignment and structure |
|---|
Probab=99.20 E-value=7.4e-11 Score=106.21 Aligned_cols=107 Identities=14% Similarity=0.095 Sum_probs=86.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.-++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++++ .+. ..++.+...|+.+...
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~-----~~~~~~~~~d~~~~~~---------- 100 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI-AGV-----DRKVQVVQADARAIPL---------- 100 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT-TTS-----CTTEEEEESCTTSCCS----------
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-hcc-----CCceEEEEcccccCCC----------
Confidence 346789999999999999999998999999999999999999988 322 3678888888765310
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
..++||+|+++.++++......+++.+.++|+++ +.+++....
T Consensus 101 -------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--G~l~~~~~~ 143 (263)
T 2yqz_A 101 -------------PDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPG--GALLEGWDQ 143 (263)
T ss_dssp -------------CTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEE--EEEEEEEEE
T ss_pred -------------CCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCC--cEEEEEecC
Confidence 1257999999999999888999999999999875 445444333
|
| >2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=99.20 E-value=4.3e-11 Score=101.79 Aligned_cols=126 Identities=13% Similarity=0.124 Sum_probs=86.8
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVR 178 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~ 178 (330)
+....+.+.+.... ....++++|||+|||+|..++.+++.+ .+|+++|+++.+++.+++|+..++. ..++.+.
T Consensus 13 p~~~~~~~~~~~~l--~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~ 86 (177)
T 2esr_A 13 PTSDKVRGAIFNMI--GPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA----ENRFTLL 86 (177)
T ss_dssp -----CHHHHHHHH--CSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC----GGGEEEE
T ss_pred cCHHHHHHHHHHHH--HhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC----CCceEEE
Confidence 34444555555443 224678999999999999999999885 6999999999999999999998763 2467777
Q ss_pred EecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHH--HhccCCCCeEEEEEeeee
Q 020158 179 DLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLK--RLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 179 ~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~--~lL~~~~~~~i~va~~~R 256 (330)
..|+.+..+ .....||+|++... |.....+.+++.+. ++|+++ +.+++....+
T Consensus 87 ~~d~~~~~~----------------------~~~~~fD~i~~~~~-~~~~~~~~~~~~l~~~~~L~~g--G~l~~~~~~~ 141 (177)
T 2esr_A 87 KMEAERAID----------------------CLTGRFDLVFLDPP-YAKETIVATIEALAAKNLLSEQ--VMVVCETDKT 141 (177)
T ss_dssp CSCHHHHHH----------------------HBCSCEEEEEECCS-SHHHHHHHHHHHHHHTTCEEEE--EEEEEEEETT
T ss_pred ECcHHHhHH----------------------hhcCCCCEEEECCC-CCcchHHHHHHHHHhCCCcCCC--cEEEEEECCc
Confidence 777554200 01246999997654 44455667777776 777654 5666655444
|
| >3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.3e-10 Score=103.42 Aligned_cols=112 Identities=13% Similarity=0.144 Sum_probs=89.1
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
.+.+++.... -++.+|||+|||+|..+..++..+.+|+++|+++.+++.++.+. . ..++.+...|..
T Consensus 42 ~~~~~l~~~~-----~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~--~------~~~~~~~~~d~~ 108 (242)
T 3l8d_A 42 TIIPFFEQYV-----KKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG--E------GPDLSFIKGDLS 108 (242)
T ss_dssp THHHHHHHHS-----CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT--C------BTTEEEEECBTT
T ss_pred HHHHHHHHHc-----CCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc--c------cCCceEEEcchh
Confidence 3445554442 36789999999999999999999999999999999999998774 1 356788888876
Q ss_pred CCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 184 NPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
+... ...+||+|++..++++......+++.+.++|+++ +.+++..
T Consensus 109 ~~~~-----------------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--G~l~i~~ 153 (242)
T 3l8d_A 109 SLPF-----------------------ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSD--GYACIAI 153 (242)
T ss_dssp BCSS-----------------------CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEE--EEEEEEE
T ss_pred cCCC-----------------------CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCC--eEEEEEE
Confidence 5311 1358999999999999999999999999999875 4555554
|
| >3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.20 E-value=4.1e-10 Score=96.13 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=79.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++.+|||+|||+|..++.++..+.+|+++|+++.+++.+++|+ .++.+...|+.+...
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~----------~~~~~~~~d~~~~~~------------ 103 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF----------PEARWVVGDLSVDQI------------ 103 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTTSCC------------
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC----------CCCcEEEcccccCCC------------
Confidence 5789999999999999999999999999999999999998875 235666666654310
Q ss_pred cccccCccchhccCCeeEEEEe-ccccCc--ccHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 200 ERYSWNSSELKEVQRASVLLAA-DVIYSD--DLTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaa-DviY~~--~~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
...+||+|+++ +++++. .....+++.+.++|+++ +.+++....+
T Consensus 104 -----------~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~--G~l~~~~~~~ 150 (195)
T 3cgg_A 104 -----------SETDFDLIVSAGNVMGFLAEDGREPALANIHRALGAD--GRAVIGFGAG 150 (195)
T ss_dssp -----------CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEEEETT
T ss_pred -----------CCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCC--CEEEEEeCCC
Confidence 12579999998 777664 45688999999999764 5566654433
|
| >3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.20 E-value=3.4e-11 Score=105.03 Aligned_cols=136 Identities=7% Similarity=-0.099 Sum_probs=93.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
...+|||||||+|.+++.++.. +.+|+++|+++.|++.+++|+..|+. ..++.+ .|-..
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~----~~~v~~--~d~~~------------- 109 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT----TIKYRF--LNKES------------- 109 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC----SSEEEE--ECCHH-------------
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC----CccEEE--ecccc-------------
Confidence 3679999999999999999877 56999999999999999999999874 236666 22111
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeeeCcccccchhhhccccchhhhh
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSY 277 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R~~f~~~~~d~v~~~y~~f~~~ 277 (330)
....++||+|++.++++.-...+..+..+.+.|++ +-++|+++.|.--. .. ......|..+
T Consensus 110 -----------~~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~p---ggvfISfptksl~G---r~--~gm~~~Y~~~ 170 (200)
T 3fzg_A 110 -----------DVYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHT---QNFVISFPIKSLSG---KE--KGMEENYQLW 170 (200)
T ss_dssp -----------HHTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEE---EEEEEEEECCCCC-----C--TTCCCCHHHH
T ss_pred -----------cCCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCC---CCEEEEeChHHhcC---CC--cchhhhHHHH
Confidence 11245799999999998865555555577777765 35778888664321 11 1235566666
Q ss_pred hhhhhcccccccccCCCeeeEEec
Q 020158 278 IMEEGEHRRFERESFPAFVGKCID 301 (330)
Q Consensus 278 l~~~~~~~~~~~~~~~~f~v~~i~ 301 (330)
+++.. .+..|.++++.
T Consensus 171 ~~~~~--------~~~~~~~~~~~ 186 (200)
T 3fzg_A 171 FESFT--------KGWIKILDSKV 186 (200)
T ss_dssp HHHHT--------TTTSCEEEEEE
T ss_pred HHHhc--------cCcceeeeeee
Confidence 65432 13346666554
|
| >3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.5e-10 Score=100.55 Aligned_cols=99 Identities=15% Similarity=0.070 Sum_probs=79.8
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcccc
Q 020158 121 GIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQE 200 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~ 200 (330)
+.+|||+|||+|..+..++..+.+|+++|+++.+++.++++. .++.+...|+.+..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~-------------- 97 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH----------PSVTFHHGTITDLS-------------- 97 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC----------TTSEEECCCGGGGG--------------
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC----------CCCeEEeCcccccc--------------
Confidence 789999999999999999999999999999999999998872 34666666654421
Q ss_pred ccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 201 RYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 201 ~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
...++||+|++..++++.. ....+++.+.++|+++ +.+++...
T Consensus 98 ---------~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg--G~l~i~~~ 142 (203)
T 3h2b_A 98 ---------DSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDG--GGLLMSFF 142 (203)
T ss_dssp ---------GSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEE--EEEEEEEE
T ss_pred ---------cCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCC--cEEEEEEc
Confidence 0235899999999999875 8899999999999875 45555543
|
| >2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.4e-10 Score=100.88 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=81.1
Q ss_pred CCCCeEEEEcCccCHH-HHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLA-GILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~-gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.++.+|||+|||+|.. ...++..+.+|+++|+++.+++.+++++..+. .++.+...|..+...
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~~---------- 85 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN------FKLNISKGDIRKLPF---------- 85 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT------CCCCEEECCTTSCCS----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEECchhhCCC----------
Confidence 3578999999999976 44556668899999999999999999998765 346666666654310
Q ss_pred cccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
...+||+|++..++++. .....+++.+.++|+++ +.+++...
T Consensus 86 -------------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~~ 129 (209)
T 2p8j_A 86 -------------KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPG--GLACINFL 129 (209)
T ss_dssp -------------CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEEEE
T ss_pred -------------CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCC--cEEEEEEe
Confidence 12579999999999887 67889999999999875 45555443
|
| >3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=4.2e-11 Score=110.03 Aligned_cols=112 Identities=13% Similarity=0.157 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||||||+|..++.++..+.+|+++|+++.+++.+++|+..+..... ..++.+...++.....
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~-~~~~~~~~~d~~~~~~----------- 123 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPA-FDKWVIEEANWLTLDK----------- 123 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHH-HHTCEEEECCGGGHHH-----------
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccc-cceeeEeecChhhCcc-----------
Confidence 3678999999999999999999999999999999999999998855432110 1345666666544210
Q ss_pred ccccccCccchhccCCeeEEEEe-ccccCccc-------HHHHHHHHHHhccCCCCeEEEEEe
Q 020158 199 QERYSWNSSELKEVQRASVLLAA-DVIYSDDL-------TDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaa-DviY~~~~-------~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
++....+||+|++. +++++... ...+++.+.++|+++ +.+++..
T Consensus 124 ---------~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~ 175 (293)
T 3thr_A 124 ---------DVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG--GLLVIDH 175 (293)
T ss_dssp ---------HSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEE--EEEEEEE
T ss_pred ---------ccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCC--eEEEEEe
Confidence 00023589999998 89988777 999999999999875 5555543
|
| >2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.18 E-value=7.7e-11 Score=107.50 Aligned_cols=124 Identities=18% Similarity=0.183 Sum_probs=89.7
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHH---ccCCCCCCCe
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQL---NSGVFSHQGS 174 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~---N~~~~~~~~~ 174 (330)
-.+++|+.|+ ...++.+|||||||+|..++.++... .+|+++|+++.+++.+++|+.. |+. ..+
T Consensus 23 ~D~~lL~~~~-------~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l----~~~ 91 (260)
T 2ozv_A 23 MDAMLLASLV-------ADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF----SAR 91 (260)
T ss_dssp CHHHHHHHTC-------CCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT----GGG
T ss_pred cHHHHHHHHh-------cccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC----cce
Confidence 5678888875 23467899999999999999999884 6999999999999999999988 653 346
Q ss_pred eEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc------------------ccHHHHHHH
Q 020158 175 VHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD------------------DLTDALFHT 236 (330)
Q Consensus 175 v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~------------------~~~~~l~~t 236 (330)
+.+...|+.+..+.. ....+ ...+||+|++.-.++.. ...+.+++.
T Consensus 92 v~~~~~D~~~~~~~~---------------~~~~~-~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~ 155 (260)
T 2ozv_A 92 IEVLEADVTLRAKAR---------------VEAGL-PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRT 155 (260)
T ss_dssp EEEEECCTTCCHHHH---------------HHTTC-CTTCEEEEEECCCC---------------------CCHHHHHHH
T ss_pred EEEEeCCHHHHhhhh---------------hhhcc-CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHH
Confidence 889888877641000 00000 13579999998555433 247889999
Q ss_pred HHHhccCCCCeEEEEE
Q 020158 237 LKRLMPLGSKKVLYLA 252 (330)
Q Consensus 237 l~~lL~~~~~~~i~va 252 (330)
+.++|+++ +.+++.
T Consensus 156 ~~~~Lkpg--G~l~~~ 169 (260)
T 2ozv_A 156 ASAIMVSG--GQLSLI 169 (260)
T ss_dssp HHHHEEEE--EEEEEE
T ss_pred HHHHcCCC--CEEEEE
Confidence 99999875 455553
|
| >2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.6e-10 Score=108.17 Aligned_cols=109 Identities=17% Similarity=0.320 Sum_probs=85.7
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
.++|.... ...++++|||+|||+|..++.+++.+. +|+++|+++ +++.+++|+..|+. ..++.+...|..+
T Consensus 53 ~~~i~~~~---~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~----~~~i~~~~~d~~~ 124 (340)
T 2fyt_A 53 RDFIYQNP---HIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKL----EDTITLIKGKIEE 124 (340)
T ss_dssp HHHHHHCG---GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTC----TTTEEEEESCTTT
T ss_pred HHHHHhhh---hhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCC----CCcEEEEEeeHHH
Confidence 34454442 456789999999999999999999864 999999996 99999999999874 3678888887665
Q ss_pred CCCCCccCCCCCccccccccCccchhccCCeeEEEEec---cccCcccHHHHHHHHHHhccCCC
Q 020158 185 PWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAAD---VIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaD---viY~~~~~~~l~~tl~~lL~~~~ 245 (330)
... ..++||+|++.. .+.+....+.+++.+.++|++++
T Consensus 125 ~~~-----------------------~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG 165 (340)
T 2fyt_A 125 VHL-----------------------PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGG 165 (340)
T ss_dssp SCC-----------------------SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEE
T ss_pred hcC-----------------------CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCc
Confidence 310 125799999877 35556778889999999998763
|
| >4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-10 Score=111.71 Aligned_cols=106 Identities=20% Similarity=0.217 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..+.+|||||||+|..++.+++. +.+|+++|+++.+++.+++|+..|+... ..++.+...|..+..
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~--~~~v~~~~~D~~~~~---------- 288 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEA--LDRCEFMINNALSGV---------- 288 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGG--GGGEEEEECSTTTTC----------
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCc--CceEEEEechhhccC----------
Confidence 45589999999999999999998 6899999999999999999999987311 125666777765531
Q ss_pred ccccccccCccchhccCCeeEEEEeccccC-----cccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYS-----DDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~-----~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
..++||+|++...++. ......+++.+.++|+++ +.+++.
T Consensus 289 --------------~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~iv 333 (375)
T 4dcm_A 289 --------------EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN--GELYIV 333 (375)
T ss_dssp --------------CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred --------------CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCC--cEEEEE
Confidence 1247999999988774 334457899999999875 455553
|
| >4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.1e-10 Score=106.70 Aligned_cols=101 Identities=19% Similarity=0.152 Sum_probs=79.3
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
|.++|.... -.+.+|||||||+|..+..++..+.+|+++|+++.|++.+++ ..++.+...+..+
T Consensus 29 l~~~l~~~~-----~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~-----------~~~v~~~~~~~e~ 92 (257)
T 4hg2_A 29 LFRWLGEVA-----PARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR-----------HPRVTYAVAPAED 92 (257)
T ss_dssp HHHHHHHHS-----SCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC-----------CTTEEEEECCTTC
T ss_pred HHHHHHHhc-----CCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh-----------cCCceeehhhhhh
Confidence 457776653 235699999999999999999999999999999999876542 2567777777654
Q ss_pred CCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 185 PWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
..- ..++||+|+++.++++.+ .+.+++.+.++|++|+
T Consensus 93 ~~~-----------------------~~~sfD~v~~~~~~h~~~-~~~~~~e~~rvLkpgG 129 (257)
T 4hg2_A 93 TGL-----------------------PPASVDVAIAAQAMHWFD-LDRFWAELRRVARPGA 129 (257)
T ss_dssp CCC-----------------------CSSCEEEEEECSCCTTCC-HHHHHHHHHHHEEEEE
T ss_pred hcc-----------------------cCCcccEEEEeeehhHhh-HHHHHHHHHHHcCCCC
Confidence 310 235899999999998765 7789999999998863
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=1.6e-10 Score=98.53 Aligned_cols=113 Identities=12% Similarity=0.144 Sum_probs=86.4
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
+..++.... ...++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|+..++. ..++.+...|+.+
T Consensus 21 ~~~~~~~~~---~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 21 VRCLIMCLA---EPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGL----GDNVTLMEGDAPE 93 (192)
T ss_dssp HHHHHHHHH---CCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC----CTTEEEEESCHHH
T ss_pred HHHHHHHhc---CCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCC----CcceEEEecCHHH
Confidence 444555443 446788999999999999999999889999999999999999999998763 2567777776544
Q ss_pred CCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 185 PWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
. +.....||+|++..++. ....+++.+.++|+++ +.+++.
T Consensus 94 ~-----------------------~~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~g--G~l~~~ 133 (192)
T 1l3i_A 94 A-----------------------LCKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPG--GRIIVT 133 (192)
T ss_dssp H-----------------------HTTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEE--EEEEEE
T ss_pred h-----------------------cccCCCCCEEEECCchH---HHHHHHHHHHHhcCCC--cEEEEE
Confidence 2 11124799999987764 4688999999999775 455553
|
| >3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.17 E-value=5.9e-11 Score=109.96 Aligned_cols=116 Identities=16% Similarity=0.158 Sum_probs=81.6
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCC-------------------------
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVF------------------------- 169 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~------------------------- 169 (330)
..+++++|||+|||+|..++.+|+. +.+|+++|+++.+++.+++|+..+....
T Consensus 43 ~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (292)
T 3g07_A 43 EWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRK 122 (292)
T ss_dssp GGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC--------------------------------
T ss_pred hhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccc
Confidence 4568999999999999999999987 6899999999999999999876543110
Q ss_pred ----------------------------CCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEe
Q 020158 170 ----------------------------SHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAA 221 (330)
Q Consensus 170 ----------------------------~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaa 221 (330)
....++.+...||....... .......||+|++.
T Consensus 123 ~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~------------------~~~~~~~fD~I~~~ 184 (292)
T 3g07_A 123 RSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDL------------------VEAQTPEYDVVLCL 184 (292)
T ss_dssp -------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHH------------------HTTCCCCEEEEEEE
T ss_pred cccccchhhhccCccccccccccccccccccccceEEecccccCcccc------------------ccccCCCcCEEEEC
Confidence 00135667776665431000 00023689999999
Q ss_pred ccccC------cccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 222 DVIYS------DDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 222 DviY~------~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.++.+ +.....+++.+.++|+++ +.+++.
T Consensus 185 ~vl~~ihl~~~~~~~~~~l~~~~~~LkpG--G~lil~ 219 (292)
T 3g07_A 185 SLTKWVHLNWGDEGLKRMFRRIYRHLRPG--GILVLE 219 (292)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred hHHHHhhhcCCHHHHHHHHHHHHHHhCCC--cEEEEe
Confidence 99844 347788999999999875 455553
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.17 E-value=3.3e-10 Score=98.91 Aligned_cols=102 Identities=14% Similarity=0.116 Sum_probs=80.9
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
...++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|+..++. .++.+...|+.+...
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~--------- 139 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDL-----HNVSTRHGDGWQGWQ--------- 139 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCGGGCCG---------
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCC-----CceEEEECCcccCCc---------
Confidence 345788999999999999999999999999999999999999999998763 468888888765421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
...+||+|++..++.+... .+.++|+++ +.+++...
T Consensus 140 --------------~~~~~D~i~~~~~~~~~~~------~~~~~L~pg--G~lv~~~~ 175 (210)
T 3lbf_A 140 --------------ARAPFDAIIVTAAPPEIPT------ALMTQLDEG--GILVLPVG 175 (210)
T ss_dssp --------------GGCCEEEEEESSBCSSCCT------HHHHTEEEE--EEEEEEEC
T ss_pred --------------cCCCccEEEEccchhhhhH------HHHHhcccC--cEEEEEEc
Confidence 2358999999988866442 577888765 55555443
|
| >1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=99.17 E-value=3.7e-11 Score=100.96 Aligned_cols=109 Identities=21% Similarity=0.162 Sum_probs=81.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++++|||+|||+|..++.+++.+.+|+++|+++.+++.+++|+..++ . ++.+...|+.+..+.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~~~~~d~~~~~~~----------- 103 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTG-----L-GARVVALPVEVFLPE----------- 103 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHT-----C-CCEEECSCHHHHHHH-----------
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcC-----C-ceEEEeccHHHHHHh-----------
Confidence 77899999999999999999998889999999999999999999876 2 566666665432000
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHH--HhccCCCCeEEEEEeeeeC
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLK--RLMPLGSKKVLYLALEKRY 257 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~--~lL~~~~~~~i~va~~~R~ 257 (330)
......+||+|++..++. ...+.+++.+. ++|+++ +.++++...+.
T Consensus 104 --------~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~g--G~~~~~~~~~~ 151 (171)
T 1ws6_A 104 --------AKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAG--GLYVLQHPKDL 151 (171)
T ss_dssp --------HHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEE--EEEEEEEETTS
T ss_pred --------hhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCC--cEEEEEeCCcc
Confidence 000123799999877644 66677778787 888664 56666655443
|
| >1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=99.17 E-value=2.9e-10 Score=100.01 Aligned_cols=105 Identities=13% Similarity=0.066 Sum_probs=79.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||||||+|..++.+|+. +.+|+++|+++.+++.+++|+..++ ..++.+...|+.+....
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~-----~~~v~~~~~d~~~~~~~--------- 106 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG-----VPNIKLLWVDGSDLTDY--------- 106 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC-----CSSEEEEECCSSCGGGT---------
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC-----CCCEEEEeCCHHHHHhh---------
Confidence 4679999999999999999987 5799999999999999999999887 35788888887652100
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc--------cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD--------LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--------~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+ ..+.||+|++.-...+.. ....+++.+.++|+++ +.+++.
T Consensus 107 -----------~-~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~ 155 (214)
T 1yzh_A 107 -----------F-EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPEN--GEIHFK 155 (214)
T ss_dssp -----------S-CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTT--CEEEEE
T ss_pred -----------c-CCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCC--cEEEEE
Confidence 0 124799999874322111 3468999999999876 456554
|
| >3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=99.17 E-value=3.4e-10 Score=101.68 Aligned_cols=103 Identities=17% Similarity=0.124 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.+|.+|||+|||+|.+++.+|+.+ .+|+++|+++.+++.+++|+..|+. ..++.++..|+.+...
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl----~~~I~~~~gD~l~~~~--------- 86 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL----TSKIDVRLANGLSAFE--------- 86 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC----TTTEEEEECSGGGGCC---------
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECchhhccc---------
Confidence 357899999999999999999985 4899999999999999999999985 4679999988776421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|+.+-.-- ..+..++......|++ .+.++++
T Consensus 87 --------------~~~~~D~IviaGmGg--~lI~~IL~~~~~~l~~--~~~lIlq 124 (230)
T 3lec_A 87 --------------EADNIDTITICGMGG--RLIADILNNDIDKLQH--VKTLVLQ 124 (230)
T ss_dssp --------------GGGCCCEEEEEEECH--HHHHHHHHHTGGGGTT--CCEEEEE
T ss_pred --------------cccccCEEEEeCCch--HHHHHHHHHHHHHhCc--CCEEEEE
Confidence 123699987665543 4556667766666754 3455554
|
| >2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46 | Back alignment and structure |
|---|
Probab=99.16 E-value=1e-10 Score=102.50 Aligned_cols=108 Identities=15% Similarity=0.166 Sum_probs=81.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.++.+|||||||+|..++.++..+ .+|+++|+++.+++.+++|+..|+. .++.+...|+.+..+
T Consensus 53 ~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-----~~v~~~~~D~~~~~~---------- 117 (202)
T 2fpo_A 53 IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-----GNARVVNSNAMSFLA---------- 117 (202)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-----CSEEEECSCHHHHHS----------
T ss_pred cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEECCHHHHHh----------
Confidence 367899999999999999877775 5999999999999999999999873 467777766543210
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHH--hccCCCCeEEEEEeeee
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKR--LMPLGSKKVLYLALEKR 256 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~--lL~~~~~~~i~va~~~R 256 (330)
....+||+|++... |.......+++.+.+ +|++ ++.++++....
T Consensus 118 ------------~~~~~fD~V~~~~p-~~~~~~~~~l~~l~~~~~L~p--gG~l~i~~~~~ 163 (202)
T 2fpo_A 118 ------------QKGTPHNIVFVDPP-FRRGLLEETINLLEDNGWLAD--EALIYVESEVE 163 (202)
T ss_dssp ------------SCCCCEEEEEECCS-SSTTTHHHHHHHHHHTTCEEE--EEEEEEEEEGG
T ss_pred ------------hcCCCCCEEEECCC-CCCCcHHHHHHHHHhcCccCC--CcEEEEEECCC
Confidence 01247999997655 777778888888876 3765 46677665444
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=4.9e-10 Score=97.81 Aligned_cols=102 Identities=17% Similarity=0.103 Sum_probs=82.1
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++.+|||+|||+|..+..++..+.+|+++|+++.+++.+++ ++ ..++.+...|..+..
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~----~~-----~~~~~~~~~d~~~~~----------- 103 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR----HG-----LDNVEFRQQDLFDWT----------- 103 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG----GC-----CTTEEEEECCTTSCC-----------
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh----cC-----CCCeEEEecccccCC-----------
Confidence 3456799999999999999999999999999999999999887 22 256888888876531
Q ss_pred cccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCCCeEEEEEee
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
..++||+|+++.++++... ...+++.+.++|+++ +.+++...
T Consensus 104 -------------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg--G~l~~~~~ 147 (218)
T 3ou2_A 104 -------------PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPG--GVVEFVDV 147 (218)
T ss_dssp -------------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEEEE
T ss_pred -------------CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCC--eEEEEEeC
Confidence 2358999999999998776 488999999999875 45555433
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=2.2e-10 Score=104.10 Aligned_cols=115 Identities=17% Similarity=0.140 Sum_probs=86.5
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
..+......+++... ..++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|+..|+. . +.+
T Consensus 103 ~~~tt~~~~~~l~~~-----~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~-----~-v~~ 171 (254)
T 2nxc_A 103 HHETTRLALKALARH-----LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGV-----R-PRF 171 (254)
T ss_dssp CSHHHHHHHHHHHHH-----CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTC-----C-CEE
T ss_pred CCHHHHHHHHHHHHh-----cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCC-----c-EEE
Confidence 345666666666544 24678999999999999999999988999999999999999999999873 3 666
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...|+.+. + ...+||+|+++-+. .....++..+.++|+++ +.++++
T Consensus 172 ~~~d~~~~-----------------------~-~~~~fD~Vv~n~~~---~~~~~~l~~~~~~Lkpg--G~lils 217 (254)
T 2nxc_A 172 LEGSLEAA-----------------------L-PFGPFDLLVANLYA---ELHAALAPRYREALVPG--GRALLT 217 (254)
T ss_dssp EESCHHHH-----------------------G-GGCCEEEEEEECCH---HHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred EECChhhc-----------------------C-cCCCCCEEEECCcH---HHHHHHHHHHHHHcCCC--CEEEEE
Confidence 66554431 1 12479999986332 34678899999999775 555554
|
| >3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.9e-10 Score=102.25 Aligned_cols=103 Identities=12% Similarity=0.086 Sum_probs=82.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..++.+|||+|||+|..+..+++.+. +|+++|+++.+++.++++... .++.+...|..+...
T Consensus 41 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~d~~~~~~--------- 103 (243)
T 3bkw_A 41 EVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD--------TGITYERADLDKLHL--------- 103 (243)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS--------SSEEEEECCGGGCCC---------
T ss_pred ccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc--------CCceEEEcChhhccC---------
Confidence 35788999999999999999999887 999999999999999877532 356777776554310
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
...+||+|+++.++++......+++.+.++|+++ +.++++.
T Consensus 104 --------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--G~l~~~~ 144 (243)
T 3bkw_A 104 --------------PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPG--GHFVFST 144 (243)
T ss_dssp --------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--EEEEEEE
T ss_pred --------------CCCCceEEEEeccccccchHHHHHHHHHHhcCcC--cEEEEEe
Confidence 1357999999999999888999999999999875 4555543
|
| >3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.5e-10 Score=108.74 Aligned_cols=108 Identities=17% Similarity=0.241 Sum_probs=86.5
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
+.++|... ...+++++|||||||+|..++.+++.|. +|+++|.+ .+++.+++|+..|+. ..++.+...|+.
T Consensus 51 ~~~~i~~~---~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~----~~~v~~~~~d~~ 122 (376)
T 3r0q_C 51 YFNAVFQN---KHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNL----DHIVEVIEGSVE 122 (376)
T ss_dssp HHHHHHTT---TTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTC----TTTEEEEESCGG
T ss_pred HHHHHHhc---cccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCC----CCeEEEEECchh
Confidence 34455544 2567899999999999999999999976 99999999 999999999999875 456888888876
Q ss_pred CCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC---cccHHHHHHHHHHhccCC
Q 020158 184 NPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS---DDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~---~~~~~~l~~tl~~lL~~~ 244 (330)
+.. ..++||+|++.-+.|. ....+.+++.+.++|+++
T Consensus 123 ~~~------------------------~~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~Lkpg 162 (376)
T 3r0q_C 123 DIS------------------------LPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPT 162 (376)
T ss_dssp GCC------------------------CSSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEE
T ss_pred hcC------------------------cCCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCC
Confidence 531 1258999999554454 367888999999999875
|
| >3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=99.14 E-value=8.5e-10 Score=97.82 Aligned_cols=104 Identities=20% Similarity=0.159 Sum_probs=83.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++..+ .++.+...|..+...
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~~-------- 106 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-------LKVKYIEADYSKYDF-------- 106 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-------TTEEEEESCTTTCCC--------
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-------CCEEEEeCchhccCC--------
Confidence 456789999999999999999988 789999999999999999887443 367888888765421
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHH--HHHHHHHHhccCCCCeEEEEEee
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTD--ALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~--~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
.++||+|++..++++....+ .+++.+.++|+++ +.++++..
T Consensus 107 ----------------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~~ 149 (234)
T 3dtn_A 107 ----------------EEKYDMVVSALSIHHLEDEDKKELYKRSYSILKES--GIFINADL 149 (234)
T ss_dssp ----------------CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEEEE
T ss_pred ----------------CCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCC--cEEEEEEe
Confidence 15899999999999876555 5999999999875 55555543
|
| >3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=3.8e-10 Score=107.36 Aligned_cols=100 Identities=15% Similarity=0.250 Sum_probs=83.0
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
...++++|||+|||+|..++.+++.+. +|+++|++ .+++.+++|+..|+. ..++.+...|+.+...
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~----~~~v~~~~~d~~~~~~-------- 129 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKL----DHVVTIIKGKVEEVEL-------- 129 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTC----TTTEEEEESCTTTCCC--------
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCC----CCcEEEEECcHHHccC--------
Confidence 346789999999999999999999965 99999999 599999999999875 4569999998876421
Q ss_pred CccccccccCccchhccCCeeEEEEecc---ccCcccHHHHHHHHHHhccCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADV---IYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDv---iY~~~~~~~l~~tl~~lL~~~ 244 (330)
..++||+|++.-+ +.+....+.+++.+.++|+++
T Consensus 130 ---------------~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~Lkpg 166 (349)
T 3q7e_A 130 ---------------PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD 166 (349)
T ss_dssp ---------------SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE
T ss_pred ---------------CCCceEEEEEccccccccCchhHHHHHHHHHHhCCCC
Confidence 1258999999665 444578999999999999876
|
| >3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.2e-10 Score=99.53 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=79.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++.+|||+|||+|..+..++..+.+|+++|+++.+++.+++++. .++.+...|+.+..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~d~~~~~------------- 102 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP---------KEFSITEGDFLSFE------------- 102 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC---------TTCCEESCCSSSCC-------------
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC---------CceEEEeCChhhcC-------------
Confidence 67899999999999999999999999999999999999988764 24556666655431
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHH--HHHHHHHhccCCCCeEEEEE
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDA--LFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~--l~~tl~~lL~~~~~~~i~va 252 (330)
. . ++||+|++..++++....+. +++.+.++|+++ +.+++.
T Consensus 103 ---------~-~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--G~l~i~ 144 (220)
T 3hnr_A 103 ---------V-P-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKG--GKIVFA 144 (220)
T ss_dssp ---------C-C-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTT--CEEEEE
T ss_pred ---------C-C-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCC--CEEEEE
Confidence 0 1 58999999999999887766 999999999876 445554
|
| >3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=4.9e-10 Score=100.42 Aligned_cols=103 Identities=18% Similarity=0.157 Sum_probs=78.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.+|.+|||+|||+|.+++.+|+.+ .+|+++|+++.+++.+++|+..|+. ..++.++..|+.+..+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl----~~~i~~~~~d~l~~l~--------- 80 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL----KEKIQVRLANGLAAFE--------- 80 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC----TTTEEEEECSGGGGCC---------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEEECchhhhcc---------
Confidence 357899999999999999999985 5899999999999999999999985 4579999998765421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|+.+..- ......++......|+++ +.+++.
T Consensus 81 --------------~~~~~D~IviaG~G--g~~i~~Il~~~~~~L~~~--~~lVlq 118 (225)
T 3kr9_A 81 --------------ETDQVSVITIAGMG--GRLIARILEEGLGKLANV--ERLILQ 118 (225)
T ss_dssp --------------GGGCCCEEEEEEEC--HHHHHHHHHHTGGGCTTC--CEEEEE
T ss_pred --------------cCcCCCEEEEcCCC--hHHHHHHHHHHHHHhCCC--CEEEEE
Confidence 11269988866542 234567777777777653 455553
|
| >1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=99.13 E-value=2.7e-10 Score=101.20 Aligned_cols=102 Identities=13% Similarity=0.029 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..+..+++.+.+|+++|+++.+++.+++++..++ .++.+...|..+..
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~~~------------ 97 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQG------LKPRLACQDISNLN------------ 97 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTT------CCCEEECCCGGGCC------------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcC------CCeEEEecccccCC------------
Confidence 377899999999999999999999999999999999999999987764 25666666654421
Q ss_pred ccccccCccchhccCCeeEEEEec-cccCc---ccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAAD-VIYSD---DLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaD-viY~~---~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|++.. ++++. .....+++.+.++|+++ +.+++.
T Consensus 98 ------------~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pg--G~l~~~ 141 (246)
T 1y8c_A 98 ------------INRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG--GVFIFD 141 (246)
T ss_dssp ------------CSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE--EEEEEE
T ss_pred ------------ccCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCC--cEEEEE
Confidence 115799999997 99876 67888999999999775 455554
|
| >3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.8e-10 Score=104.48 Aligned_cols=105 Identities=12% Similarity=0.115 Sum_probs=83.2
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
.+++++.... ...++.+|||+|||+|..++.++..+.+|+++|+++.+++.++.+. ++.+...|+.
T Consensus 21 ~~~~~l~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-----------~~~~~~~d~~ 86 (261)
T 3ege_A 21 RIVNAIINLL---NLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHP-----------QVEWFTGYAE 86 (261)
T ss_dssp HHHHHHHHHH---CCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCT-----------TEEEECCCTT
T ss_pred HHHHHHHHHh---CCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhcc-----------CCEEEECchh
Confidence 4566666553 3457889999999999999999998899999999998887655332 5677777765
Q ss_pred CCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 184 NPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
+... ..++||+|++..++++......+++.+.++|+ ++.
T Consensus 87 ~~~~-----------------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~ 125 (261)
T 3ege_A 87 NLAL-----------------------PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGT 125 (261)
T ss_dssp SCCS-----------------------CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSC
T ss_pred hCCC-----------------------CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcE
Confidence 4310 12589999999999999999999999999998 643
|
| >1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=3.3e-10 Score=103.76 Aligned_cols=108 Identities=13% Similarity=0.094 Sum_probs=85.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.++.+|||+|||+|..++.+++.+. +|+++|+++.+++.+++++..++. ..++.+...|..+...
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~---------- 128 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR----RFKVFFRAQDSYGRHM---------- 128 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCC----SSEEEEEESCTTTSCC----------
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCC----CccEEEEECCcccccc----------
Confidence 4678999999999988888888765 999999999999999999987653 3578888888765411
Q ss_pred cccccccCccchhccCCeeEEEEeccccC----cccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYS----DDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~----~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
...+.||+|++..++++ ......+++.+.++|+++ +.+++...
T Consensus 129 ------------~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~~ 175 (298)
T 1ri5_A 129 ------------DLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG--GYFIMTVP 175 (298)
T ss_dssp ------------CCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE--EEEEEEEE
T ss_pred ------------CCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCC--CEEEEEEC
Confidence 01357999999999965 566788999999999875 45555443
|
| >2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=2.5e-10 Score=102.77 Aligned_cols=115 Identities=16% Similarity=0.214 Sum_probs=84.0
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCC------------C------------
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFS------------H------------ 171 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~------------~------------ 171 (330)
...++++|||||||+|..++.++..+. +|+++|+++.+++.+++++..+..... .
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 346788999999999999999988876 999999999999999988865421000 0
Q ss_pred CCee-EEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEecccc----CcccHHHHHHHHHHhccCCCC
Q 020158 172 QGSV-HVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIY----SDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 172 ~~~v-~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY----~~~~~~~l~~tl~~lL~~~~~ 246 (330)
..++ .+...|..+..+.. -....+||+|+++.+++ +......+++.+.++|+++
T Consensus 133 ~~~v~~~~~~d~~~~~~~~-------------------~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg-- 191 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLG-------------------GVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPG-- 191 (265)
T ss_dssp HHHEEEEEECCTTSSSTTT-------------------TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEE--
T ss_pred hhhheeEEEeeeccCCCCC-------------------ccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCC--
Confidence 0126 77777766542100 00125799999999999 6667889999999999875
Q ss_pred eEEEEE
Q 020158 247 KVLYLA 252 (330)
Q Consensus 247 ~~i~va 252 (330)
+.+++.
T Consensus 192 G~li~~ 197 (265)
T 2i62_A 192 GFLVMV 197 (265)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 444444
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.7e-09 Score=97.33 Aligned_cols=134 Identities=14% Similarity=0.130 Sum_probs=91.8
Q ss_pred CcCeEeechHH-HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCC
Q 020158 93 SVGLQVWKAEL-VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGV 168 (330)
Q Consensus 93 ~~G~~vW~aa~-~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~ 168 (330)
...+++|+--. -||.-|+.....-..-+|.+|||||||+|.....+|.. | .+|++.|++++|++.+++|+..
T Consensus 49 ~~e~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~---- 124 (233)
T 4df3_A 49 GEEYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD---- 124 (233)
T ss_dssp TEEEEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT----
T ss_pred CceeeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh----
Confidence 35789998733 34555554331123457999999999999999999987 4 5899999999999999887654
Q ss_pred CCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeE
Q 020158 169 FSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKV 248 (330)
Q Consensus 169 ~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~ 248 (330)
..++.....+-..+... ......+|+|++ | ++++...+.++..+.+.|+++ +.
T Consensus 125 ---~~ni~~V~~d~~~p~~~--------------------~~~~~~vDvVf~-d-~~~~~~~~~~l~~~~r~LKpG--G~ 177 (233)
T 4df3_A 125 ---RRNIFPILGDARFPEKY--------------------RHLVEGVDGLYA-D-VAQPEQAAIVVRNARFFLRDG--GY 177 (233)
T ss_dssp ---CTTEEEEESCTTCGGGG--------------------TTTCCCEEEEEE-C-CCCTTHHHHHHHHHHHHEEEE--EE
T ss_pred ---hcCeeEEEEeccCcccc--------------------ccccceEEEEEE-e-ccCChhHHHHHHHHHHhccCC--CE
Confidence 24555555554332100 012357998884 5 445667788999999999876 45
Q ss_pred EEEEeeeeC
Q 020158 249 LYLALEKRY 257 (330)
Q Consensus 249 i~va~~~R~ 257 (330)
++++.+.|.
T Consensus 178 lvI~ik~r~ 186 (233)
T 4df3_A 178 MLMAIKARS 186 (233)
T ss_dssp EEEEEECCH
T ss_pred EEEEEeccc
Confidence 566655553
|
| >2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.11 E-value=5.4e-10 Score=100.40 Aligned_cols=101 Identities=19% Similarity=0.154 Sum_probs=82.6
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++++. .++.+...|..+..
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~~~~--------- 91 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----------PNTNFGKADLATWK--------- 91 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS----------TTSEEEECCTTTCC---------
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----------CCcEEEECChhhcC---------
Confidence 356789999999999999999988 789999999999999998871 35677777765531
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
...+||+|+++.++++......+++.+.++|+++ +.+++...
T Consensus 92 ---------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--G~l~~~~~ 133 (259)
T 2p35_A 92 ---------------PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESG--GVLAVQMP 133 (259)
T ss_dssp ---------------CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEE--EEEEEEEE
T ss_pred ---------------ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCC--eEEEEEeC
Confidence 1257999999999999989999999999999875 45555543
|
| >3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=99.11 E-value=6.2e-10 Score=100.83 Aligned_cols=103 Identities=10% Similarity=0.011 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.+|.+|||+|||+|.+++.+|+.+ .+|+++|+++.+++.+++|+..|+. ..++.++..|+.+...
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl----~~~I~v~~gD~l~~~~--------- 86 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL----TEQIDVRKGNGLAVIE--------- 86 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC----TTTEEEEECSGGGGCC---------
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEEecchhhccC---------
Confidence 357899999999999999999985 4899999999999999999999985 4679999888765421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|+.+-.-- ..+..++......|++ ...++++
T Consensus 87 --------------~~~~~D~IviagmGg--~lI~~IL~~~~~~L~~--~~~lIlq 124 (244)
T 3gnl_A 87 --------------KKDAIDTIVIAGMGG--TLIRTILEEGAAKLAG--VTKLILQ 124 (244)
T ss_dssp --------------GGGCCCEEEEEEECH--HHHHHHHHHTGGGGTT--CCEEEEE
T ss_pred --------------ccccccEEEEeCCch--HHHHHHHHHHHHHhCC--CCEEEEE
Confidence 113599987654432 3455667766677743 3555554
|
| >1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 | Back alignment and structure |
|---|
Probab=99.11 E-value=9.2e-10 Score=98.68 Aligned_cols=102 Identities=14% Similarity=0.124 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|+..++ .++.+...|+.+..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~------------ 101 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERN------LKIEFLQGDVLEIA------------ 101 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCCEEEESCGGGCC------------
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcC------CceEEEECChhhcc------------
Confidence 457899999999999999999999999999999999999999998765 35777777765431
Q ss_pred ccccccCccchhccCCeeEEEEec-cc--cCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAAD-VI--YSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaD-vi--Y~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|++.- .+ +.......+++.+.++|+++ +.+++.
T Consensus 102 ------------~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pg--G~li~~ 144 (252)
T 1wzn_A 102 ------------FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG--GVFITD 144 (252)
T ss_dssp ------------CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred ------------cCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCC--eEEEEe
Confidence 124799999752 22 23356788999999999875 445443
|
| >3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} | Back alignment and structure |
|---|
Probab=99.11 E-value=6.2e-10 Score=101.13 Aligned_cols=109 Identities=17% Similarity=0.100 Sum_probs=84.0
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchH------HHHHHHHHHHHccCCCCCCCeeEEEEec-CCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNY------ILDNCAKNVQLNSGVFSHQGSVHVRDLN-WMNPW 186 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~------~L~~~~~Nv~~N~~~~~~~~~v~v~~ld-W~~~~ 186 (330)
...++.+|||+|||+|..++.+++. + .+|+++|+++. +++.+++|+..++. ..++.+...| +....
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL----GDRLTVHFNTNLSDDL 115 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT----GGGEEEECSCCTTTCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC----CCceEEEECChhhhcc
Confidence 3457889999999999999999987 4 79999999987 99999999987653 3578888776 32210
Q ss_pred CCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 187 PPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 187 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.+ . ..++||+|++..++++......+++.+..+++++ +.+++.
T Consensus 116 ~~--------------------~-~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~g--G~l~~~ 158 (275)
T 3bkx_A 116 GP--------------------I-ADQHFDRVVLAHSLWYFASANALALLFKNMAAVC--DHVDVA 158 (275)
T ss_dssp GG--------------------G-TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTC--SEEEEE
T ss_pred CC--------------------C-CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCC--CEEEEE
Confidence 00 0 1357999999999999888888999999988754 344443
|
| >3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.11 E-value=4.8e-10 Score=100.24 Aligned_cols=118 Identities=15% Similarity=0.060 Sum_probs=88.0
Q ss_pred EeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE
Q 020158 97 QVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH 176 (330)
Q Consensus 97 ~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~ 176 (330)
..|..+......+.. ...++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|.. ..++.
T Consensus 38 ~~~~~~~~~~~~~~~-----~~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~~ 104 (245)
T 3ggd_A 38 NVERAVVVDLPRFEL-----LFNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT--------AANIS 104 (245)
T ss_dssp CGGGTHHHHHHHHTT-----TSCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC--------CTTEE
T ss_pred hhHHHHHHHHHHHhh-----ccCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc--------ccCce
Confidence 344444444444432 23567899999999999999999998899999999999999998871 24678
Q ss_pred EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCC
Q 020158 177 VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGS 245 (330)
Q Consensus 177 v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~ 245 (330)
+...|..+.... ........||+|++..++++.. ....+++.+.++|++++
T Consensus 105 ~~~~d~~~~~~~------------------~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 157 (245)
T 3ggd_A 105 YRLLDGLVPEQA------------------AQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQG 157 (245)
T ss_dssp EEECCTTCHHHH------------------HHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTC
T ss_pred EEECcccccccc------------------cccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCC
Confidence 888876653100 0011123599999999999977 88999999999998763
|
| >3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.4e-10 Score=95.43 Aligned_cols=96 Identities=15% Similarity=0.119 Sum_probs=78.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..+..+++.+.+|+++|+++.+++.++++ . .++.+...| ...
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~------~~v~~~~~d--~~~------------ 71 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK----F------DSVITLSDP--KEI------------ 71 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH----C------TTSEEESSG--GGS------------
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh----C------CCcEEEeCC--CCC------------
Confidence 4678999999999999999999877999999999999999988 1 356666665 110
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|+++.++++......+++.+.++|+++ +.+++.
T Consensus 72 ------------~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg--G~l~~~ 111 (170)
T 3i9f_A 72 ------------PDNSVDFILFANSFHDMDDKQHVISEVKRILKDD--GRVIII 111 (170)
T ss_dssp ------------CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEE--EEEEEE
T ss_pred ------------CCCceEEEEEccchhcccCHHHHHHHHHHhcCCC--CEEEEE
Confidence 1257999999999999999999999999999875 455554
|
| >1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=99.10 E-value=3.2e-10 Score=98.67 Aligned_cols=99 Identities=14% Similarity=0.030 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
+++.+|||+|||+|..++.++.. +.+|+++|+++.+++.++.|+..++. .++.+...|+.+..+
T Consensus 64 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~--------- 129 (207)
T 1jsx_A 64 LQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKL-----ENIEPVQSRVEEFPS--------- 129 (207)
T ss_dssp CCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTC-----SSEEEEECCTTTSCC---------
T ss_pred cCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCeEEEecchhhCCc---------
Confidence 35789999999999999999987 67999999999999999999998763 448888888876421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.++||+|++..+ .....+++.+.++|+++ +.+++.
T Consensus 130 ---------------~~~~D~i~~~~~----~~~~~~l~~~~~~L~~g--G~l~~~ 164 (207)
T 1jsx_A 130 ---------------EPPFDGVISRAF----ASLNDMVSWCHHLPGEQ--GRFYAL 164 (207)
T ss_dssp ---------------CSCEEEEECSCS----SSHHHHHHHHTTSEEEE--EEEEEE
T ss_pred ---------------cCCcCEEEEecc----CCHHHHHHHHHHhcCCC--cEEEEE
Confidence 247999997542 55788999999999775 455553
|
| >3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=5.6e-11 Score=106.25 Aligned_cols=98 Identities=12% Similarity=0.088 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..++.+++.+.+|+++|+++.+++.++.|+..++. ..++.+...|+.+..
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~------------ 140 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGI----ADKIEFICGDFLLLA------------ 140 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHG------------
T ss_pred cCCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC----CcCeEEEECChHHhc------------
Confidence 4788999999999999999999999999999999999999999998863 257888888765431
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
...+||+|++..++.........+..+.++|+++
T Consensus 141 ------------~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pg 174 (241)
T 3gdh_A 141 ------------SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPD 174 (241)
T ss_dssp ------------GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSC
T ss_pred ------------ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCc
Confidence 2358999999888877665555555667777665
|
| >1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6 | Back alignment and structure |
|---|
Probab=99.10 E-value=5e-10 Score=105.60 Aligned_cols=100 Identities=15% Similarity=0.254 Sum_probs=80.6
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..++++|||+|||+|..++.+++.+. +|+++|.+ .+++.+++|+..|+. ..++.+...|..+...
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~--------- 101 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGF----SDKITLLRGKLEDVHL--------- 101 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTC----TTTEEEEESCTTTSCC---------
T ss_pred hcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCC----CCCEEEEECchhhccC---------
Confidence 35788999999999999999999864 99999999 699999999999875 4678888887665311
Q ss_pred ccccccccCccchhccCCeeEEEEecc---ccCcccHHHHHHHHHHhccCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADV---IYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDv---iY~~~~~~~l~~tl~~lL~~~~ 245 (330)
..++||+|++.-+ +.+....+.++..+.++|++++
T Consensus 102 --------------~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG 139 (328)
T 1g6q_1 102 --------------PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGG 139 (328)
T ss_dssp --------------SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEE
T ss_pred --------------CCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCe
Confidence 1257999998744 4456678899999999998763
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=5.1e-10 Score=101.84 Aligned_cols=117 Identities=10% Similarity=0.045 Sum_probs=82.4
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHH----------ccCC-C-CC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQL----------NSGV-F-SH 171 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~----------N~~~-~-~~ 171 (330)
.|.+|+.... ...++.+|||+|||+|..++.+|+.|.+|+++|+++.+++.++++... ++.. . ..
T Consensus 55 ~l~~~~~~~~---~~~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (252)
T 2gb4_A 55 LLKKHLDTFL---KGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSS 131 (252)
T ss_dssp HHHHHHHHHH---TTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEET
T ss_pred HHHHHHHHhc---cCCCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccC
Confidence 4566664431 123678999999999999999999999999999999999998765431 0000 0 00
Q ss_pred CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCC
Q 020158 172 QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 172 ~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~ 245 (330)
..++.+...|..+.. ....++||+|++..+++.. .....+++.+.++|++|+
T Consensus 132 ~~~i~~~~~D~~~l~----------------------~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG 185 (252)
T 2gb4_A 132 SGSISLYCCSIFDLP----------------------RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEF 185 (252)
T ss_dssp TSSEEEEESCTTTGG----------------------GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEE
T ss_pred CCceEEEECccccCC----------------------cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCe
Confidence 246777777765431 0112589999988777653 456779999999998763
|
| >1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 | Back alignment and structure |
|---|
Probab=99.09 E-value=9.7e-10 Score=98.42 Aligned_cols=104 Identities=10% Similarity=-0.032 Sum_probs=82.3
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++..+ .++.+...|+.+...
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~d~~~~~~--------- 154 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-------PVGKFILASMETATL--------- 154 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-------SEEEEEESCGGGCCC---------
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-------CceEEEEccHHHCCC---------
Confidence 346789999999999999988877 467999999999999999887542 467777777665311
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
..++||+|++..++++. .....+++.+.++|+++ +.+++..
T Consensus 155 --------------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg--G~l~i~~ 197 (254)
T 1xtp_A 155 --------------PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN--GYIFFKE 197 (254)
T ss_dssp --------------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEEE
T ss_pred --------------CCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCC--eEEEEEe
Confidence 12579999999999987 56889999999999875 4555543
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.2e-10 Score=101.28 Aligned_cols=94 Identities=14% Similarity=0.050 Sum_probs=72.8
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
-++++|||+|||+|..+..++..+.+|+++|+++.+++.++.+ +.+...|..+...+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-------------~~~~~~d~~~~~~~---------- 96 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK-------------FNVVKSDAIEYLKS---------- 96 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT-------------SEEECSCHHHHHHT----------
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------------cceeeccHHHHhhh----------
Confidence 4678999999999999999999999999999999999988866 23333332211000
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~ 246 (330)
+ ..++||+|++..++++.. ....+++.+.++|++++.
T Consensus 97 ----------~-~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 135 (240)
T 3dli_A 97 ----------L-PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSY 135 (240)
T ss_dssp ----------S-CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCC
T ss_pred ----------c-CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcE
Confidence 0 135899999999999877 669999999999988654
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.3e-09 Score=95.53 Aligned_cols=117 Identities=13% Similarity=0.093 Sum_probs=85.0
Q ss_pred EeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCCCCC
Q 020158 97 QVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQG 173 (330)
Q Consensus 97 ~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~ 173 (330)
+.|....+.+ ++.... ...++.+|||+|||+|..++.+++.+ .+|+++|+++.+++.+++|+..++. .
T Consensus 58 ~~~~~~~~~~-~~~~~~---~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~ 128 (215)
T 2yxe_A 58 QTISAIHMVG-MMCELL---DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY-----D 128 (215)
T ss_dssp EEECCHHHHH-HHHHHT---TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC-----T
T ss_pred cEeCcHHHHH-HHHHhh---CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----C
Confidence 4555544444 444432 34578899999999999999999875 7999999999999999999988762 4
Q ss_pred eeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 174 SVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 174 ~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
++.+...|..... ....+||+|++..++++.. +.+.++|+++ +.+++..
T Consensus 129 ~v~~~~~d~~~~~-----------------------~~~~~fD~v~~~~~~~~~~------~~~~~~L~pg--G~lv~~~ 177 (215)
T 2yxe_A 129 NVIVIVGDGTLGY-----------------------EPLAPYDRIYTTAAGPKIP------EPLIRQLKDG--GKLLMPV 177 (215)
T ss_dssp TEEEEESCGGGCC-----------------------GGGCCEEEEEESSBBSSCC------HHHHHTEEEE--EEEEEEE
T ss_pred CeEEEECCcccCC-----------------------CCCCCeeEEEECCchHHHH------HHHHHHcCCC--cEEEEEE
Confidence 5777777653321 1135799999999987644 4778889775 4555543
|
| >3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.9e-10 Score=103.13 Aligned_cols=101 Identities=15% Similarity=0.164 Sum_probs=81.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..+..++..+.+|+++|+++.+++.++++. .++.+...|..+..
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~------------ 113 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY----------PHLHFDVADARNFR------------ 113 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----------TTSCEEECCTTTCC------------
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC----------CCCEEEECChhhCC------------
Confidence 46789999999999999999998899999999999999998775 23455566655421
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
...+||+|++..++++......+++.+.++|+++ +.+++....
T Consensus 114 ------------~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg--G~l~~~~~~ 156 (279)
T 3ccf_A 114 ------------VDKPLDAVFSNAMLHWVKEPEAAIASIHQALKSG--GRFVAEFGG 156 (279)
T ss_dssp ------------CSSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--EEEEEEEEC
T ss_pred ------------cCCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCC--cEEEEEecC
Confidence 1247999999999999888999999999999875 455554443
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=7.8e-11 Score=105.89 Aligned_cols=100 Identities=13% Similarity=0.126 Sum_probs=76.8
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+|.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++...+. .++.+...+|.+.....
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~------~~~~~~~~~a~~~~~~~-------- 124 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPTL-------- 124 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGGS--------
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC------CceEEEeehHHhhcccc--------
Confidence 46889999999999999988876 5789999999999999999987654 57788888876531110
Q ss_pred cccccccCccchhccCCeeEEEE-----eccccCcccHHHHHHHHHHhccCCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLA-----ADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIla-----aDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
....||.|+. .....+....+.+++.+.++|+||+
T Consensus 125 -------------~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG 164 (236)
T 3orh_A 125 -------------PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGG 164 (236)
T ss_dssp -------------CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEE
T ss_pred -------------cccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCC
Confidence 2357998864 3334445567889999999998863
|
| >3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2.6e-10 Score=103.53 Aligned_cols=97 Identities=15% Similarity=0.094 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..+.+|||+|||+|..++.+|.. +.+|+++|.++.+++.++.|+..++. .++.+...++.+.....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l-----~~v~~~~~d~~~~~~~~------- 146 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL-----KGARALWGRAEVLAREA------- 146 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC-----SSEEEEECCHHHHTTST-------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-----CceEEEECcHHHhhccc-------
Confidence 46789999999999999999987 57999999999999999999999873 45888887765431100
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
....+||+|++.-+ ...+.+++.+.++|+++
T Consensus 147 -------------~~~~~fD~I~s~a~----~~~~~ll~~~~~~Lkpg 177 (249)
T 3g89_A 147 -------------GHREAYARAVARAV----APLCVLSELLLPFLEVG 177 (249)
T ss_dssp -------------TTTTCEEEEEEESS----CCHHHHHHHHGGGEEEE
T ss_pred -------------ccCCCceEEEECCc----CCHHHHHHHHHHHcCCC
Confidence 01258999998654 35688999999999875
|
| >3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=6.3e-10 Score=100.64 Aligned_cols=97 Identities=14% Similarity=-0.009 Sum_probs=78.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++.+|||+|||+|..+..+++.+.+|+++|+++.+++.+++++ .++.+...|..+..
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~------------- 106 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRN----------PDAVLHHGDMRDFS------------- 106 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTTCC-------------
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhC----------CCCEEEECChHHCC-------------
Confidence 5689999999999999999999999999999999999998874 24677777766531
Q ss_pred cccccCccchhccCCeeEEEEec-cccCc---ccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 200 ERYSWNSSELKEVQRASVLLAAD-VIYSD---DLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaD-viY~~---~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
..++||+|++.. ++++. .....+++.+.++|+++ +.+++.
T Consensus 107 -----------~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pg--G~l~i~ 150 (263)
T 3pfg_A 107 -----------LGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPD--GVVVVE 150 (263)
T ss_dssp -----------CSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEE--EEEEEC
T ss_pred -----------ccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCC--cEEEEE
Confidence 135899999997 88776 46778899999999775 455553
|
| >4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.1e-09 Score=105.24 Aligned_cols=114 Identities=21% Similarity=0.201 Sum_probs=87.9
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHc-----cCCCCCCCeeEEEEecCCCCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLN-----SGVFSHQGSVHVRDLNWMNPWPPI 189 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N-----~~~~~~~~~v~v~~ldW~~~~~~~ 189 (330)
..++.+|||||||+|..++.+++. +.+|+++|+++.+++.+++|+..+ +... ..++.+...|+.+.....
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~--~~~v~~~~~d~~~l~~~~ 158 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPS--RSNVRFLKGFIENLATAE 158 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTT--CCCEEEEESCTTCGGGCB
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccC--CCceEEEEccHHHhhhcc
Confidence 457899999999999999998876 459999999999999999999876 2110 357888888877631100
Q ss_pred ccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 190 FSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 190 ~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
. ..+ ..++||+|++..++++......+++.+.++|+++ +.++++
T Consensus 159 ~----------------~~~-~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg--G~l~i~ 202 (383)
T 4fsd_A 159 P----------------EGV-PDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDG--GELYFS 202 (383)
T ss_dssp S----------------CCC-CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--EEEEEE
T ss_pred c----------------CCC-CCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCC--CEEEEE
Confidence 0 000 1358999999999999888999999999999876 455554
|
| >1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 | Back alignment and structure |
|---|
Probab=99.07 E-value=2.6e-10 Score=102.30 Aligned_cols=101 Identities=12% Similarity=-0.019 Sum_probs=78.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||+|||+|..++.+|.. +.+|+++|+++.+++.+++|+..++. .++.+...|+.+....
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~v~~~~~d~~~~~~~--------- 135 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL-----ENTTFCHDRAETFGQR--------- 135 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC-----SSEEEEESCHHHHTTC---------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCEEEEeccHHHhccc---------
Confidence 6789999999999999999964 67999999999999999999998873 4588887765432100
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
.....+||+|++..+ .....+++.+.++|+++ +.+++
T Consensus 136 -----------~~~~~~fD~V~~~~~----~~~~~~l~~~~~~Lkpg--G~l~~ 172 (240)
T 1xdz_A 136 -----------KDVRESYDIVTARAV----ARLSVLSELCLPLVKKN--GLFVA 172 (240)
T ss_dssp -----------TTTTTCEEEEEEECC----SCHHHHHHHHGGGEEEE--EEEEE
T ss_pred -----------ccccCCccEEEEecc----CCHHHHHHHHHHhcCCC--CEEEE
Confidence 001257999998763 56789999999999875 44544
|
| >3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.7e-10 Score=99.76 Aligned_cols=103 Identities=14% Similarity=0.085 Sum_probs=76.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..+..++..+.+|+++|+++.+++.++++ . .+.+...++.+.....
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---~--------~~~~~~~~~~~~~~~~--------- 110 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA---G--------AGEVHLASYAQLAEAK--------- 110 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT---C--------SSCEEECCHHHHHTTC---------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh---c--------ccccchhhHHhhcccc---------
Confidence 3568999999999999999999999999999999999999877 1 1223333322210000
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
.....+||+|+++.+++ ......+++.+.++|+++ +.++++..
T Consensus 111 ----------~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pg--G~l~~~~~ 153 (227)
T 3e8s_A 111 ----------VPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPG--GALVIQTL 153 (227)
T ss_dssp ----------SCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEE--EEEEEEEC
T ss_pred ----------cccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCC--eEEEEEec
Confidence 01224699999999999 788889999999999775 56666544
|
| >3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.1e-09 Score=93.32 Aligned_cols=106 Identities=18% Similarity=0.188 Sum_probs=73.1
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
+.+..|.+++... ..++.+|||+|||+|..++.+++.+ +|+++|+++.+++. . .++.+..
T Consensus 8 ~~~~~l~~~l~~~-----~~~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~--------~------~~~~~~~ 67 (170)
T 3q87_B 8 EDTYTLMDALERE-----GLEMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES--------H------RGGNLVR 67 (170)
T ss_dssp HHHHHHHHHHHHH-----TCCSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT--------C------SSSCEEE
T ss_pred ccHHHHHHHHHhh-----cCCCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc--------c------cCCeEEE
Confidence 4556677775332 2467799999999999999999999 99999999999886 1 3466777
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCccc---------HHHHHHHHHHhccCCCCeEEE
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDL---------TDALFHTLKRLMPLGSKKVLY 250 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~---------~~~l~~tl~~lL~~~~~~~i~ 250 (330)
.|+.+.. ..++||+|+++..++.... ...+++.+.+.+ ++ +.++
T Consensus 68 ~d~~~~~------------------------~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pg--G~l~ 120 (170)
T 3q87_B 68 ADLLCSI------------------------NQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TV--GMLY 120 (170)
T ss_dssp CSTTTTB------------------------CGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CS--SEEE
T ss_pred CChhhhc------------------------ccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CC--CEEE
Confidence 7766531 1257999999766664222 234555555555 43 4555
Q ss_pred EE
Q 020158 251 LA 252 (330)
Q Consensus 251 va 252 (330)
+.
T Consensus 121 ~~ 122 (170)
T 3q87_B 121 LL 122 (170)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=9.9e-10 Score=101.64 Aligned_cols=79 Identities=18% Similarity=0.327 Sum_probs=63.6
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVR 178 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~ 178 (330)
+.+..|.+++.... ...++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..|+. ..++.+.
T Consensus 106 ~~te~lv~~~l~~~---~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l----~~~v~~~ 178 (284)
T 1nv8_A 106 PETEELVELALELI---RKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGV----SDRFFVR 178 (284)
T ss_dssp TTHHHHHHHHHHHH---HHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTC----TTSEEEE
T ss_pred hhHHHHHHHHHHHh---cccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCceEEE
Confidence 34556666666542 1125679999999999999999998 78999999999999999999999874 3468999
Q ss_pred EecCCCC
Q 020158 179 DLNWMNP 185 (330)
Q Consensus 179 ~ldW~~~ 185 (330)
..||.+.
T Consensus 179 ~~D~~~~ 185 (284)
T 1nv8_A 179 KGEFLEP 185 (284)
T ss_dssp ESSTTGG
T ss_pred ECcchhh
Confidence 9998763
|
| >2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1e-09 Score=100.53 Aligned_cols=118 Identities=14% Similarity=0.210 Sum_probs=89.1
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
+.+..|.+++.... . .++.+|||+|||+|..++.++.. +.+|+++|+++.+++.+++|+..++. .++.+
T Consensus 93 ~~te~l~~~~l~~~---~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~-----~~v~~ 163 (276)
T 2b3t_A 93 PDTECLVEQALARL---P-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI-----KNIHI 163 (276)
T ss_dssp TTHHHHHHHHHHHS---C-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC-----CSEEE
T ss_pred chHHHHHHHHHHhc---c-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEE
Confidence 45667777777653 2 45789999999999999999976 67999999999999999999998873 46888
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEec-------------cccCc------------ccHHH
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAAD-------------VIYSD------------DLTDA 232 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaD-------------viY~~------------~~~~~ 232 (330)
...||.+.. ..++||+|++.. ++++. .....
T Consensus 164 ~~~d~~~~~------------------------~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~ 219 (276)
T 2b3t_A 164 LQSDWFSAL------------------------AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVH 219 (276)
T ss_dssp ECCSTTGGG------------------------TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHH
T ss_pred EEcchhhhc------------------------ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHH
Confidence 888876531 124799999973 33222 24577
Q ss_pred HHHHHHHhccCCCCeEEEEE
Q 020158 233 LFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 233 l~~tl~~lL~~~~~~~i~va 252 (330)
+++.+.++|+++ +.+++.
T Consensus 220 ~l~~~~~~Lkpg--G~l~~~ 237 (276)
T 2b3t_A 220 IIEQSRNALVSG--GFLLLE 237 (276)
T ss_dssp HHHHHGGGEEEE--EEEEEE
T ss_pred HHHHHHHhcCCC--CEEEEE
Confidence 888888999765 455553
|
| >3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.5e-09 Score=96.30 Aligned_cols=110 Identities=17% Similarity=0.179 Sum_probs=83.2
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
+.+++.... -.+.+|||+|||+|..++.+++. .+|+++|+++.+++.+++|+..++ .++.+...|..+
T Consensus 23 ~~~~~~~~~-----~~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~~------~~~~~~~~d~~~ 90 (243)
T 3d2l_A 23 WVAWVLEQV-----EPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMETN------RHVDFWVQDMRE 90 (243)
T ss_dssp HHHHHHHHS-----CTTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCGGG
T ss_pred HHHHHHHHc-----CCCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhcC------CceEEEEcChhh
Confidence 444555442 24589999999999999999888 899999999999999999998764 356677666544
Q ss_pred CCCCCccCCCCCccccccccCccchhccCCeeEEEEe-ccccCc---ccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 185 PWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAA-DVIYSD---DLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaa-DviY~~---~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.. ...+||+|++. |++++. .....+++.+.++|+++ +.+++.
T Consensus 91 ~~------------------------~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg--G~l~~~ 136 (243)
T 3d2l_A 91 LE------------------------LPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDG--GKLLFD 136 (243)
T ss_dssp CC------------------------CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred cC------------------------CCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCC--eEEEEE
Confidence 21 12579999987 487765 56778899999999875 445443
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=99.06 E-value=7.8e-10 Score=95.57 Aligned_cols=106 Identities=13% Similarity=0.031 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++.+|||+|||+|..++.+++. + .+|+++|+++.+++.+++|+..++. ..++.+...|..+...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~-------- 88 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL----IDRVTLIKDGHQNMDK-------- 88 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC----GGGEEEECSCGGGGGG--------
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCCeEEEECCHHHHhh--------
Confidence 45789999999999999999887 2 5999999999999999999998863 3578888887654310
Q ss_pred CccccccccCccchhccCCeeEEEEeccccC---------cccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYS---------DDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~---------~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...++||+|++.-.++. ......+++.+.++|+++ +.+++.
T Consensus 89 --------------~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g--G~l~~~ 138 (197)
T 3eey_A 89 --------------YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG--GIITVV 138 (197)
T ss_dssp --------------TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred --------------hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC--CEEEEE
Confidence 01257999997754422 123456899999999875 444443
|
| >3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=9.9e-10 Score=101.51 Aligned_cols=107 Identities=16% Similarity=0.156 Sum_probs=82.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++.+|||||||+|..++.+++.+.+|+++|+++.+++.+++++..+.... ..++.+...|+.+..
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~--~~~v~~~~~d~~~~~------------- 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADV--RDRCTLVQGDMSAFA------------- 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHH--HTTEEEEECBTTBCC-------------
T ss_pred CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhccccc--ccceEEEeCchhcCC-------------
Confidence 44599999999999999999999999999999999999999987653100 146888888877631
Q ss_pred cccccCccchhccCCeeEEEEe-ccccCcc--cHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 200 ERYSWNSSELKEVQRASVLLAA-DVIYSDD--LTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaa-DviY~~~--~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
..++||+|+++ .++++.. ....+++.+.++|+++ +.+++...
T Consensus 147 -----------~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pg--G~l~~~~~ 191 (299)
T 3g2m_A 147 -----------LDKRFGTVVISSGSINELDEADRRGLYASVREHLEPG--GKFLLSLA 191 (299)
T ss_dssp -----------CSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEE--EEEEEEEE
T ss_pred -----------cCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCC--cEEEEEee
Confidence 13589999876 5555443 4688999999999875 45555443
|
| >4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=99.05 E-value=9.6e-11 Score=101.83 Aligned_cols=117 Identities=10% Similarity=0.058 Sum_probs=65.3
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
+..+.+++.... ....++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++ . ++.+..
T Consensus 14 ~~~~~~~~~~~l--~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~~~~ 85 (215)
T 4dzr_A 14 TEVLVEEAIRFL--KRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG-----A-VVDWAA 85 (215)
T ss_dssp HHHHHHHHHHHH--TTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------------CCH
T ss_pred HHHHHHHHHHHh--hhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC-----C-ceEEEE
Confidence 455666666554 12257889999999999999999998 5599999999999999999998775 2 455555
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCccc--------------------------HHHH
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDL--------------------------TDAL 233 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--------------------------~~~l 233 (330)
.|+.+..+ .......+||+|++...++.... +..+
T Consensus 86 ~d~~~~~~-------------------~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (215)
T 4dzr_A 86 ADGIEWLI-------------------ERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRM 146 (215)
T ss_dssp HHHHHHHH-------------------HHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHH
T ss_pred cchHhhhh-------------------hhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHH
Confidence 55443100 00001268999999655543222 1677
Q ss_pred HHHHHHhccCCC
Q 020158 234 FHTLKRLMPLGS 245 (330)
Q Consensus 234 ~~tl~~lL~~~~ 245 (330)
++.+.++|++++
T Consensus 147 l~~~~~~LkpgG 158 (215)
T 4dzr_A 147 AALPPYVLARGR 158 (215)
T ss_dssp HTCCGGGBCSSS
T ss_pred HHHHHHHhcCCC
Confidence 788888897763
|
| >2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.3e-09 Score=95.08 Aligned_cols=99 Identities=15% Similarity=0.057 Sum_probs=77.6
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
++.+|||+|||+|..+..+ +. +|+++|+++.+++.++++. .++.+...|..+...
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~~----------- 91 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA----------PEATWVRAWGEALPF----------- 91 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC----------TTSEEECCCTTSCCS-----------
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcccccCCC-----------
Confidence 7889999999999888776 66 9999999999999999876 134555555543210
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
..++||+|++..++++......+++.+.++|+++ +.++++...+
T Consensus 92 ------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--G~l~i~~~~~ 135 (211)
T 2gs9_A 92 ------------PGESFDVVLLFTTLEFVEDVERVLLEARRVLRPG--GALVVGVLEA 135 (211)
T ss_dssp ------------CSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEE--EEEEEEEECT
T ss_pred ------------CCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCC--CEEEEEecCC
Confidence 1257999999999999989999999999999875 5566654443
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.2e-10 Score=117.89 Aligned_cols=87 Identities=14% Similarity=0.048 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
-++.+|||+|||+|+.+..+|+.|++|+++|.++.+|+.++..+..++ ..++.++..+..+...
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~-----~~~~~~~~~~~~~~~~----------- 128 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENP-----DFAAEFRVGRIEEVIA----------- 128 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTST-----TSEEEEEECCHHHHHH-----------
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcC-----CCceEEEECCHHHHhh-----------
Confidence 366799999999999999999999999999999999999999998765 2467777766433200
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHH
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTD 231 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~ 231 (330)
....++||+|+|.+|+++....+
T Consensus 129 ----------~~~~~~fD~v~~~e~~ehv~~~~ 151 (569)
T 4azs_A 129 ----------ALEEGEFDLAIGLSVFHHIVHLH 151 (569)
T ss_dssp ----------HCCTTSCSEEEEESCHHHHHHHH
T ss_pred ----------hccCCCccEEEECcchhcCCCHH
Confidence 00235899999999999865443
|
| >2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53 | Back alignment and structure |
|---|
Probab=99.04 E-value=2.2e-09 Score=94.70 Aligned_cols=105 Identities=10% Similarity=0.038 Sum_probs=76.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||||||+|..++.+|+. +.+|+++|+++.+++.+++|+..++ ..++.+...|..+...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~-----~~nv~~~~~d~~~l~~---------- 102 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE-----AQNVKLLNIDADTLTD---------- 102 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC-----CSSEEEECCCGGGHHH----------
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC-----CCCEEEEeCCHHHHHh----------
Confidence 4679999999999999999987 6799999999999999999999876 3568887777554100
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc--------cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD--------LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--------~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.-....+|.|+..-..-+.. ....+++.+.++|+++ +.+++.
T Consensus 103 -----------~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~Lkpg--G~l~~~ 152 (213)
T 2fca_A 103 -----------VFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG--GSIHFK 152 (213)
T ss_dssp -----------HCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS--CEEEEE
T ss_pred -----------hcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCC--CEEEEE
Confidence 00124689887642211111 1478999999999876 455554
|
| >1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2e-10 Score=102.54 Aligned_cols=103 Identities=16% Similarity=0.125 Sum_probs=75.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 120 NGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
++.+|||+|||+|..++.+++.+ .+|+++|+++.|++.+++|+..++ .++.+...|+.+..+.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~~---------- 123 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPT---------- 123 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGG----------
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC------CCeEEEecCHHHhhcc----------
Confidence 56899999999999999998864 499999999999999999887654 5678877776542100
Q ss_pred ccccccCccchhccCCeeEEEE-ecccc----CcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLA-ADVIY----SDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIla-aDviY----~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
+ ..++||+|++ .-.+. +....+.+++.+.++|+++ +.+++
T Consensus 124 ----------~-~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkpg--G~l~~ 168 (236)
T 1zx0_A 124 ----------L-PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG--GVLTY 168 (236)
T ss_dssp ----------S-CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE--EEEEE
T ss_pred ----------c-CCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCC--eEEEE
Confidence 0 1257999998 33321 2233457789999999875 44444
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.7e-09 Score=97.27 Aligned_cols=100 Identities=11% Similarity=0.108 Sum_probs=79.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
...++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++. ..++.+...|+.+..
T Consensus 90 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~------- 158 (255)
T 3mb5_A 90 GISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF----DDRVTIKLKDIYEGI------- 158 (255)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC----TTTEEEECSCGGGCC-------
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC----CCceEEEECchhhcc-------
Confidence 4457889999999999999999988 68999999999999999999998874 345888888876431
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
...+||+|++ +......+++.+.++|+++ +.+++
T Consensus 159 -----------------~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~g--G~l~~ 192 (255)
T 3mb5_A 159 -----------------EEENVDHVIL-----DLPQPERVVEHAAKALKPG--GFFVA 192 (255)
T ss_dssp -----------------CCCSEEEEEE-----CSSCGGGGHHHHHHHEEEE--EEEEE
T ss_pred -----------------CCCCcCEEEE-----CCCCHHHHHHHHHHHcCCC--CEEEE
Confidence 1246999997 3445567889999999875 44444
|
| >1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=99.02 E-value=5.1e-09 Score=91.10 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=71.8
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..++.+|||+|||+|..++.+++.+ .+|+++|+++.+++.++.|+..|+ . ++.+...|+.+.
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-----~-~~~~~~~d~~~~----------- 109 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFK-----G-KFKVFIGDVSEF----------- 109 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGT-----T-SEEEEESCGGGC-----------
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcC-----C-CEEEEECchHHc-----------
Confidence 4578899999999999999999986 479999999999999999998875 2 577777665542
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhc
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLM 241 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL 241 (330)
...||+|++.-.++.. .....+++.+.+++
T Consensus 110 ---------------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 110 ---------------NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp ---------------CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC
T ss_pred ---------------CCCCCEEEEcCCCccccCCchHHHHHHHHHhc
Confidence 1379999987665443 34456777777776
|
| >2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.3e-09 Score=94.77 Aligned_cols=112 Identities=11% Similarity=0.024 Sum_probs=83.5
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
.+.+++... ..++.+|||+|||+|..++.+++.+. +|+++|+++.+++.+++|+.. ..++.+...|.
T Consensus 31 ~~~~~l~~~-----~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~-------~~~i~~~~~d~ 98 (215)
T 2pxx_A 31 SFRALLEPE-----LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH-------VPQLRWETMDV 98 (215)
T ss_dssp HHHHHHGGG-----CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT-------CTTCEEEECCT
T ss_pred HHHHHHHHh-----cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc-------CCCcEEEEcch
Confidence 356666544 24578999999999999999998875 899999999999999988753 24677777776
Q ss_pred CCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC---------------cccHHHHHHHHHHhccCCCCe
Q 020158 183 MNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS---------------DDLTDALFHTLKRLMPLGSKK 247 (330)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~---------------~~~~~~l~~tl~~lL~~~~~~ 247 (330)
.+... ....||+|++..++.. ......+++.+.++|+++ +
T Consensus 99 ~~~~~-----------------------~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G 153 (215)
T 2pxx_A 99 RKLDF-----------------------PSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG--G 153 (215)
T ss_dssp TSCCS-----------------------CSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE--E
T ss_pred hcCCC-----------------------CCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC--C
Confidence 55310 1257999999887743 235678999999999875 4
Q ss_pred EEEEE
Q 020158 248 VLYLA 252 (330)
Q Consensus 248 ~i~va 252 (330)
.+++.
T Consensus 154 ~li~~ 158 (215)
T 2pxx_A 154 RFISM 158 (215)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 45443
|
| >2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 | Back alignment and structure |
|---|
Probab=99.02 E-value=2.9e-10 Score=103.54 Aligned_cols=116 Identities=16% Similarity=0.188 Sum_probs=78.8
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCC------------------------
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSH------------------------ 171 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~------------------------ 171 (330)
...+|++|||||||+|+.++.++..+ .+|+++|+++.|++.+++++..+...+..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 34678999999999998887777766 47999999999999999988765321100
Q ss_pred CCeeE-EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc----ccHHHHHHHHHHhccCCCC
Q 020158 172 QGSVH-VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD----DLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 172 ~~~v~-v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~----~~~~~l~~tl~~lL~~~~~ 246 (330)
..++. +...|-.+..+.. .....+||+|+++-|+++. .....+++.+.++|++|
T Consensus 132 ~~~i~~~~~~D~~~~~~~~-------------------~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPG-- 190 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLA-------------------PAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPG-- 190 (263)
T ss_dssp HHHEEEEEECCTTSSSTTT-------------------TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEE--
T ss_pred HhhhheEEeccccCCCCCC-------------------ccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCC--
Confidence 01222 5555544421100 0013479999999998652 45567888888999876
Q ss_pred eEEEEEe
Q 020158 247 KVLYLAL 253 (330)
Q Consensus 247 ~~i~va~ 253 (330)
+.++++.
T Consensus 191 G~li~~~ 197 (263)
T 2a14_A 191 GHLVTTV 197 (263)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 4555553
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=2.3e-09 Score=99.69 Aligned_cols=96 Identities=21% Similarity=0.182 Sum_probs=76.5
Q ss_pred CCCCCCeEEEEcCccC-HHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 117 SDFNGIISLELGAGTG-LAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 117 ~~~~g~~VLELG~GtG-L~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
..-+|.+|||+|||+| ++++.+|+. +.+|+++|+++++++.+++|+...+. .++++...|-.+.
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-----~~v~~v~gDa~~l--------- 184 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-----DGVNVITGDETVI--------- 184 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-----CSEEEEESCGGGG---------
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-----CCeEEEECchhhC---------
Confidence 3457899999999986 777888875 88999999999999999999988662 4677776663321
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
....||+|+.+-. ......+++.+.+.|++|+
T Consensus 185 ----------------~d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG 216 (298)
T 3fpf_A 185 ----------------DGLEFDVLMVAAL---AEPKRRVFRNIHRYVDTET 216 (298)
T ss_dssp ----------------GGCCCSEEEECTT---CSCHHHHHHHHHHHCCTTC
T ss_pred ----------------CCCCcCEEEECCC---ccCHHHHHHHHHHHcCCCc
Confidence 1358999997654 4677899999999998864
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=99.01 E-value=3.2e-09 Score=93.95 Aligned_cols=115 Identities=12% Similarity=0.097 Sum_probs=83.8
Q ss_pred EeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE
Q 020158 97 QVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH 176 (330)
Q Consensus 97 ~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~ 176 (330)
+.|....++. ++.... ...++.+|||+|||+|..++.++..+.+|+++|+++.+++.+++|+..++ ++.
T Consensus 51 ~~~~~~~~~~-~~~~~~---~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~-------~v~ 119 (231)
T 1vbf_A 51 INTTALNLGI-FMLDEL---DLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN-------NIK 119 (231)
T ss_dssp EEECCHHHHH-HHHHHT---TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS-------SEE
T ss_pred CccCCHHHHH-HHHHhc---CCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC-------CeE
Confidence 4455554433 444442 34567899999999999999999999999999999999999999986542 577
Q ss_pred EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 177 VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 177 v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
+...|..+.. ....+||+|++..++++.. +.+.++|+++ +.+++..
T Consensus 120 ~~~~d~~~~~-----------------------~~~~~fD~v~~~~~~~~~~------~~~~~~L~pg--G~l~~~~ 165 (231)
T 1vbf_A 120 LILGDGTLGY-----------------------EEEKPYDRVVVWATAPTLL------CKPYEQLKEG--GIMILPI 165 (231)
T ss_dssp EEESCGGGCC-----------------------GGGCCEEEEEESSBBSSCC------HHHHHTEEEE--EEEEEEE
T ss_pred EEECCccccc-----------------------ccCCCccEEEECCcHHHHH------HHHHHHcCCC--cEEEEEE
Confidence 7777765421 1235799999999987643 3577889765 4555543
|
| >2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... | Back alignment and structure |
|---|
Probab=99.01 E-value=2.1e-09 Score=98.86 Aligned_cols=115 Identities=17% Similarity=0.163 Sum_probs=76.8
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCC-----------CC--------------
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFS-----------HQ-------------- 172 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~-----------~~-------------- 172 (330)
.++.+|||||||+|..++.++.. +.+|+++|+++.|++.+++++..+..... ..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 57889999999999977666553 67999999999999999887643210000 00
Q ss_pred CeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC----cccHHHHHHHHHHhccCCCCeE
Q 020158 173 GSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS----DDLTDALFHTLKRLMPLGSKKV 248 (330)
Q Consensus 173 ~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~----~~~~~~l~~tl~~lL~~~~~~~ 248 (330)
..+.+...|..+..+.. .... ..++||+|+++.++++ ......+++.+.++|++| +.
T Consensus 150 ~~~~~~~~D~~~~~~~~----------------~~~~-~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpG--G~ 210 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLG----------------AGSP-APLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPG--GH 210 (289)
T ss_dssp HEEEEECCCTTSSSTTC----------------SSCS-SCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEE--EE
T ss_pred hhceEEecccCCCCCcc----------------cccc-CCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCC--CE
Confidence 01344555554421100 0000 1246999999999988 557889999999999876 44
Q ss_pred EEEE
Q 020158 249 LYLA 252 (330)
Q Consensus 249 i~va 252 (330)
+++.
T Consensus 211 l~~~ 214 (289)
T 2g72_A 211 LLLI 214 (289)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.01 E-value=5.1e-09 Score=93.47 Aligned_cols=101 Identities=14% Similarity=0.069 Sum_probs=78.5
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
....+.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++|+..++. ..++.+...|+.+...
T Consensus 88 ~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~~~d~~~~~~--------- 154 (248)
T 2yvl_A 88 NLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNL----GKNVKFFNVDFKDAEV--------- 154 (248)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTC----CTTEEEECSCTTTSCC---------
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCC----CCcEEEEEcChhhccc---------
Confidence 345788999999999999999998888999999999999999999988753 2567777777665310
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
....||+|++. ......+++.+.++|++++ .+++
T Consensus 155 --------------~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG--~l~~ 188 (248)
T 2yvl_A 155 --------------PEGIFHAAFVD-----VREPWHYLEKVHKSLMEGA--PVGF 188 (248)
T ss_dssp --------------CTTCBSEEEEC-----SSCGGGGHHHHHHHBCTTC--EEEE
T ss_pred --------------CCCcccEEEEC-----CcCHHHHHHHHHHHcCCCC--EEEE
Confidence 12479999973 3455678888999998764 4444
|
| >2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A | Back alignment and structure |
|---|
Probab=99.01 E-value=3e-09 Score=101.03 Aligned_cols=99 Identities=12% Similarity=0.208 Sum_probs=78.1
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
...++++|||+|||+|..++.+++.+ .+|+++|.++ +++.+++|+..|+. ..++.+...|+.+..
T Consensus 47 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l----~~~v~~~~~d~~~~~--------- 112 (348)
T 2y1w_A 47 TDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNL----TDRIVVIPGKVEEVS--------- 112 (348)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTC----TTTEEEEESCTTTCC---------
T ss_pred ccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCC----CCcEEEEEcchhhCC---------
Confidence 44688999999999999999999986 4999999996 88999999998874 367888888876531
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLG 244 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~ 244 (330)
..++||+|++..+.|+. ......+..+.++|+++
T Consensus 113 ---------------~~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~Lkpg 148 (348)
T 2y1w_A 113 ---------------LPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPS 148 (348)
T ss_dssp ---------------CSSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEE
T ss_pred ---------------CCCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCC
Confidence 12479999998887753 34445556678899765
|
| >2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.1e-09 Score=100.91 Aligned_cols=98 Identities=13% Similarity=0.133 Sum_probs=77.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
+|.+|||+|||+|..++.+|+.+. +|+++|+++.+++.+++|+..|+. ..++.+...|..+...
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~----~~~v~~~~~D~~~~~~----------- 189 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV----EDRMSAYNMDNRDFPG----------- 189 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSCTTTCCC-----------
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCC----CceEEEEECCHHHhcc-----------
Confidence 478999999999999999999876 699999999999999999999985 3458888887665421
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..+||+|++.-. .....+++.+.++|+++ +.+++
T Consensus 190 -------------~~~fD~Vi~~~p----~~~~~~l~~~~~~Lkpg--G~l~~ 223 (278)
T 2frn_A 190 -------------ENIADRILMGYV----VRTHEFIPKALSIAKDG--AIIHY 223 (278)
T ss_dssp -------------CSCEEEEEECCC----SSGGGGHHHHHHHEEEE--EEEEE
T ss_pred -------------cCCccEEEECCc----hhHHHHHHHHHHHCCCC--eEEEE
Confidence 257999988422 33467788888999875 44444
|
| >2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51 | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-09 Score=102.83 Aligned_cols=110 Identities=13% Similarity=0.061 Sum_probs=79.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++.+|||||||+|..++.+|+.+++|+++|+++.+++.+++|+..|+.. ..++.+...|..+..+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~---~~~v~~i~~D~~~~l~------------ 217 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLE---QAPIRWICEDAMKFIQ------------ 217 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCT---TSCEEEECSCHHHHHH------------
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCC---ccceEEEECcHHHHHH------------
Confidence 5679999999999999999999889999999999999999999999741 1247777666543200
Q ss_pred cccccCccchhccCCeeEEEEeccccC----------cccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYS----------DDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~----------~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
.......+||+|++.-..|. ......+++.+.++|++++ .+++..
T Consensus 218 -------~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG--~lli~~ 272 (332)
T 2igt_A 218 -------REERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKA--LGLVLT 272 (332)
T ss_dssp -------HHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTC--CEEEEE
T ss_pred -------HHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCc--EEEEEE
Confidence 00001358999998443332 2346778888889998764 444443
|
| >3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=2.6e-09 Score=110.53 Aligned_cols=153 Identities=16% Similarity=0.106 Sum_probs=105.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+|++|||||||||..++.+|+.|+ +|+++|+++.+++.+++|+..|+.. ..++.+...|..+..+
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~---~~~v~~i~~D~~~~l~---------- 604 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLT---GRAHRLIQADCLAWLR---------- 604 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC---STTEEEEESCHHHHHH----------
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC---ccceEEEecCHHHHHH----------
Confidence 4789999999999999999998865 6999999999999999999999852 1468887777543200
Q ss_pred cccccccCccchhccCCeeEEEEeccccC-----------cccHHHHHHHHHHhccCCCCeEEEEEeeeeCcccccchhh
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYS-----------DDLTDALFHTLKRLMPLGSKKVLYLALEKRYNFSLNDLDV 266 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~-----------~~~~~~l~~tl~~lL~~~~~~~i~va~~~R~~f~~~~~d~ 266 (330)
....+||+|++.-..|. ...+..++..+.++|+++ +.++++...+.. ..
T Consensus 605 ------------~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lkpg--G~L~~s~~~~~~-~~----- 664 (703)
T 3v97_A 605 ------------EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAG--GTIMFSNNKRGF-RM----- 664 (703)
T ss_dssp ------------HCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEE--EEEEEEECCTTC-CC-----
T ss_pred ------------hcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCC--cEEEEEECCccc-cc-----
Confidence 01357999997543332 235677888889999764 566666544321 11
Q ss_pred hccccchhhhhhhhhhcccccccccCCCeeeEEecCCCcCcccccccCCCceEEEEEEe
Q 020158 267 VANGYSHFRSYIMEEGEHRRFERESFPAFVGKCIDLNEFPQYVREYDRGNDVELWQIKR 325 (330)
Q Consensus 267 v~~~y~~f~~~l~~~~~~~~~~~~~~~~f~v~~i~~~~~p~~~~~yer~~~l~lw~i~~ 325 (330)
-...+. ..|+..+.|....+|.-|.... +--..|.|+.
T Consensus 665 -------~~~~l~------------~~g~~~~~i~~~~lp~df~~~~--~ih~~w~i~~ 702 (703)
T 3v97_A 665 -------DLDGLA------------KLGLKAQEITQKTLSQDFARNR--QIHNCWLITA 702 (703)
T ss_dssp -------CHHHHH------------HTTEEEEECTTTTCCGGGTTCS--SCCEEEEEEE
T ss_pred -------CHHHHH------------HcCCceeeeeeccCCCCCCCCC--cceEEEEEee
Confidence 012222 2367888888877888773222 2345688763
|
| >2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.99 E-value=3.9e-09 Score=95.49 Aligned_cols=101 Identities=20% Similarity=0.224 Sum_probs=76.7
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++.+|||+|||+|..+..+++.+.+|+++|+++.+++.++++.. .+ +...|..+...
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~---------~~--~~~~d~~~~~~------------ 110 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV---------KN--VVEAKAEDLPF------------ 110 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC---------SC--EEECCTTSCCS------------
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC---------CC--EEECcHHHCCC------------
Confidence 67899999999999999999999999999999999999988753 11 44444433210
Q ss_pred cccccCccchhccCCeeEEEEeccccC-cccHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYS-DDLTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~-~~~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
..+.||+|++..++++ ......+++.+.++|+++ +.+++....+
T Consensus 111 -----------~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~~~~ 155 (260)
T 2avn_A 111 -----------PSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPD--GLLIATVDNF 155 (260)
T ss_dssp -----------CTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEE--EEEEEEEEBH
T ss_pred -----------CCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCC--eEEEEEeCCh
Confidence 1257999999886654 356899999999999875 5566654443
|
| >3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... | Back alignment and structure |
|---|
Probab=98.99 E-value=6.7e-10 Score=98.27 Aligned_cols=109 Identities=15% Similarity=0.134 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++++|||||||+|..++.+|+. +.+|+++|+++.+++.+++|+..++. ..++++...|..+..+...
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~l~~~~----- 127 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL----QDKVTILNGASQDLIPQLK----- 127 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEESCHHHHGGGTT-----
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC----CCceEEEECCHHHHHHHHH-----
Confidence 35689999999999999999985 57999999999999999999998874 3568888877543211000
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
. .....+||+|++.-..........++..+ ++|+++ +++++
T Consensus 128 -----------~-~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~Lkpg--G~lv~ 168 (221)
T 3u81_A 128 -----------K-KYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKG--TVLLA 168 (221)
T ss_dssp -----------T-TSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTT--CEEEE
T ss_pred -----------H-hcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCC--eEEEE
Confidence 0 00125799999765443322233455555 888765 45555
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=98.99 E-value=3.8e-09 Score=98.89 Aligned_cols=110 Identities=20% Similarity=0.150 Sum_probs=82.5
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC---eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEe
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW---TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDL 180 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~---~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~l 180 (330)
.+...+.... ...++.+|||+|||+|..++.+++.+. +|+++|+++.+++.+++|+..++. .++.+...
T Consensus 62 ~~~~~l~~~l---~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~-----~~v~~~~~ 133 (317)
T 1dl5_A 62 SLMALFMEWV---GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI-----ENVIFVCG 133 (317)
T ss_dssp HHHHHHHHHT---TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEES
T ss_pred HHHHHHHHhc---CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCeEEEEC
Confidence 3344444442 345788999999999999999998854 499999999999999999998763 45888888
Q ss_pred cCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 181 NWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 181 dW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
|..+..+ ...+||+|++..++.+.. +.+.++|+++ +.+++.
T Consensus 134 d~~~~~~-----------------------~~~~fD~Iv~~~~~~~~~------~~~~~~Lkpg--G~lvi~ 174 (317)
T 1dl5_A 134 DGYYGVP-----------------------EFSPYDVIFVTVGVDEVP------ETWFTQLKEG--GRVIVP 174 (317)
T ss_dssp CGGGCCG-----------------------GGCCEEEEEECSBBSCCC------HHHHHHEEEE--EEEEEE
T ss_pred Chhhccc-----------------------cCCCeEEEEEcCCHHHHH------HHHHHhcCCC--cEEEEE
Confidence 7655311 125799999999887654 5678899775 455554
|
| >3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.4e-09 Score=97.13 Aligned_cols=103 Identities=11% Similarity=0.157 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++++|||+|||+|..++.+|+. +.+|+++|+++.+++.+++|+..++. ..++.+...|..+..+.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~-------- 137 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF----ENQVRIIEGNALEQFEN-------- 137 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC----TTTEEEEESCGGGCHHH--------
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECCHHHHHHh--------
Confidence 35789999999999999999984 68999999999999999999998764 35788888876543110
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
....+||+|++. ........+++.+.++|+++ +.+++
T Consensus 138 -------------~~~~~fD~V~~~---~~~~~~~~~l~~~~~~Lkpg--G~lv~ 174 (232)
T 3ntv_A 138 -------------VNDKVYDMIFID---AAKAQSKKFFEIYTPLLKHQ--GLVIT 174 (232)
T ss_dssp -------------HTTSCEEEEEEE---TTSSSHHHHHHHHGGGEEEE--EEEEE
T ss_pred -------------hccCCccEEEEc---CcHHHHHHHHHHHHHhcCCC--eEEEE
Confidence 013589999954 34566788999999999775 45544
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=98.99 E-value=2.1e-09 Score=98.48 Aligned_cols=101 Identities=17% Similarity=0.118 Sum_probs=79.9
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHc-cCCCCCCCeeEEEEecCCCCCCCCccC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLN-SGVFSHQGSVHVRDLNWMNPWPPIFSL 192 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N-~~~~~~~~~v~v~~ldW~~~~~~~~~~ 192 (330)
...++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..+ + ..++.+...|+.+..
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g-----~~~v~~~~~d~~~~~------ 175 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD-----IGNVRTSRSDIADFI------ 175 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC-----CTTEEEECSCTTTCC------
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCcEEEEECchhccC------
Confidence 3456789999999999999999987 689999999999999999999887 6 256888888776531
Q ss_pred CCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 193 GNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 193 ~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
..+.||+|++ +......+++.+.++|+++ +.++++.
T Consensus 176 ------------------~~~~fD~Vi~-----~~~~~~~~l~~~~~~Lkpg--G~l~i~~ 211 (275)
T 1yb2_A 176 ------------------SDQMYDAVIA-----DIPDPWNHVQKIASMMKPG--SVATFYL 211 (275)
T ss_dssp ------------------CSCCEEEEEE-----CCSCGGGSHHHHHHTEEEE--EEEEEEE
T ss_pred ------------------cCCCccEEEE-----cCcCHHHHHHHHHHHcCCC--CEEEEEe
Confidence 1247999998 3445578899999999775 4555543
|
| >1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3 | Back alignment and structure |
|---|
Probab=98.98 E-value=3.6e-09 Score=93.41 Aligned_cols=130 Identities=13% Similarity=0.178 Sum_probs=81.1
Q ss_pred CeEeechH-HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCC
Q 020158 95 GLQVWKAE-LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSH 171 (330)
Q Consensus 95 G~~vW~aa-~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~ 171 (330)
....|..- ..++..+..... -..-+|.+|||||||+|..+..+|+.. .+|+++|+++.+++.+.+++...
T Consensus 32 ~y~~~~~~~~~l~~~~~~~l~-~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~------ 104 (210)
T 1nt2_A 32 GYREWVPWRSKLAAMILKGHR-LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER------ 104 (210)
T ss_dssp TEEECCGGGCHHHHHHHTSCC-CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC------
T ss_pred hhhhcChhHHHHHHHHHhhcc-cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC------
Confidence 55677542 223333333211 123467899999999999999888774 69999999999988777666532
Q ss_pred CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 172 QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 172 ~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
.++.+...|...... + ....++||+|++. + ..+.....+++.+.++|++| +.+++
T Consensus 105 -~~v~~~~~d~~~~~~--------------~------~~~~~~fD~V~~~-~-~~~~~~~~~l~~~~r~Lkpg--G~l~i 159 (210)
T 1nt2_A 105 -NNIIPLLFDASKPWK--------------Y------SGIVEKVDLIYQD-I-AQKNQIEILKANAEFFLKEK--GEVVI 159 (210)
T ss_dssp -SSEEEECSCTTCGGG--------------T------TTTCCCEEEEEEC-C-CSTTHHHHHHHHHHHHEEEE--EEEEE
T ss_pred -CCeEEEEcCCCCchh--------------h------cccccceeEEEEe-c-cChhHHHHHHHHHHHHhCCC--CEEEE
Confidence 245444433322100 0 0012579999976 3 33444556789999999875 55656
Q ss_pred Eeeee
Q 020158 252 ALEKR 256 (330)
Q Consensus 252 a~~~R 256 (330)
+...+
T Consensus 160 ~~~~~ 164 (210)
T 1nt2_A 160 MVKAR 164 (210)
T ss_dssp EEEHH
T ss_pred EEecC
Confidence 54443
|
| >3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.5e-09 Score=94.67 Aligned_cols=108 Identities=12% Similarity=0.064 Sum_probs=80.8
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
.+.+++.... .++.+|||+|||+|..+..+++.+.+|+++|+++.+++.++++. .++.+...|..
T Consensus 29 ~~~~~l~~~~-----~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~----------~~~~~~~~d~~ 93 (239)
T 3bxo_A 29 DIADLVRSRT-----PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL----------PDATLHQGDMR 93 (239)
T ss_dssp HHHHHHHHHC-----TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC----------TTCEEEECCTT
T ss_pred HHHHHHHHhc-----CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC----------CCCEEEECCHH
Confidence 4455555441 46789999999999999999998889999999999999998764 23566677665
Q ss_pred CCCCCCccCCCCCccccccccCccchhccCCeeEEEE-eccccCc---ccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 184 NPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLA-ADVIYSD---DLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIla-aDviY~~---~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+.. ...+||+|++ .+++++. .....+++.+.++|+++ +.+++.
T Consensus 94 ~~~------------------------~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg--G~l~~~ 140 (239)
T 3bxo_A 94 DFR------------------------LGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPG--GVVVVE 140 (239)
T ss_dssp TCC------------------------CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEE--EEEEEC
T ss_pred Hcc------------------------cCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCC--eEEEEE
Confidence 431 1247999995 5577665 56678999999999775 455553
|
| >2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.2e-09 Score=103.45 Aligned_cols=99 Identities=16% Similarity=0.177 Sum_probs=77.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||||||+|..++.+++.+ .+|+++|+++.+++.+++|+..|+. .+.+...|....
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~------~~~~~~~d~~~~------------ 257 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV------EGEVFASNVFSE------------ 257 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC------CCEEEECSTTTT------------
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC------CCEEEEcccccc------------
Confidence 46799999999999999999886 5899999999999999999998863 244444444332
Q ss_pred cccccccCccchhccCCeeEEEEeccccC-----cccHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYS-----DDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~-----~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..++||+|+++.++++ ......+++.+.++|+++ +.+++
T Consensus 258 -------------~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkpg--G~l~i 301 (343)
T 2pjd_A 258 -------------VKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSG--GELRI 301 (343)
T ss_dssp -------------CCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEE--EEEEE
T ss_pred -------------ccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCC--cEEEE
Confidence 1247999999988764 345678999999999875 44444
|
| >3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=98.98 E-value=4.2e-09 Score=92.28 Aligned_cols=102 Identities=14% Similarity=0.047 Sum_probs=78.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..+..++..+.+|+++|+++.+++.++.+. ..+...|..+.....
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~------------~~~~~~d~~~~~~~~--------- 89 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL------------DHVVLGDIETMDMPY--------- 89 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS------------SEEEESCTTTCCCCS---------
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC------------CcEEEcchhhcCCCC---------
Confidence 46789999999999999999988899999999999998887553 134445544321100
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
...+||+|++.+++++......+++.+.++|+++ +.+++....
T Consensus 90 ------------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~g--G~l~~~~~~ 132 (230)
T 3cc8_A 90 ------------EEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQN--GVILASIPN 132 (230)
T ss_dssp ------------CTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEE--EEEEEEEEC
T ss_pred ------------CCCccCEEEECChhhhcCCHHHHHHHHHHHcCCC--CEEEEEeCC
Confidence 1257999999999999888899999999999765 556665443
|
| >3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.98 E-value=8.7e-10 Score=102.36 Aligned_cols=107 Identities=10% Similarity=0.037 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCccCHHHHHHH--Hh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLS--RV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA--~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++.+|||+|||+|..++.+| .. +.+|+++|+++.+++.+++|+..++. ..++.+...|+.+..
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~--------- 183 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL----AGQITLHRQDAWKLD--------- 183 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT----GGGEEEEECCGGGCC---------
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC----CCceEEEECchhcCC---------
Confidence 467899999999999999885 22 57999999999999999999987663 356888888876641
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHH---HHHHHHHHhccCCCCeEEEEEeee
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTD---ALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~---~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
....||+|++..++++..... .+++.+.++|++| +.++++...
T Consensus 184 ---------------~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~i~~~~ 229 (305)
T 3ocj_A 184 ---------------TREGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPG--GALVTSFLT 229 (305)
T ss_dssp ---------------CCSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEE--EEEEEECCC
T ss_pred ---------------ccCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCC--eEEEEEecC
Confidence 115899999999998754444 4899999999775 566665433
|
| >3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.97 E-value=5.6e-09 Score=108.30 Aligned_cols=124 Identities=12% Similarity=0.081 Sum_probs=91.0
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCC-CCCCCeeEEEE
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGV-FSHQGSVHVRD 179 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~-~~~~~~v~v~~ 179 (330)
...+++.... ...++.+|||||||+|..++.+++.+ .+|+++|+++.+++.+++++...... .....++.+..
T Consensus 708 qRle~LLelL---~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiq 784 (950)
T 3htx_A 708 QRVEYALKHI---RESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYD 784 (950)
T ss_dssp HHHHHHHHHH---HHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEE
T ss_pred HHHHHHHHHh---cccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEE
Confidence 3344444442 22478899999999999999999987 79999999999999999877653110 00135788888
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHH--HHHHHHHHhccCCCCeEEEEEeeee
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTD--ALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~--~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
.|..+... ....||+|++.+++++..... .+++.+.++|++| .++++...+
T Consensus 785 GDa~dLp~-----------------------~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG---~LIISTPN~ 837 (950)
T 3htx_A 785 GSILEFDS-----------------------RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK---LLIVSTPNY 837 (950)
T ss_dssp SCTTSCCT-----------------------TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS---EEEEEECBG
T ss_pred CchHhCCc-----------------------ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC---EEEEEecCc
Confidence 88766421 235899999999999866544 5899999999875 566665443
|
| >2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=4.5e-09 Score=101.29 Aligned_cols=111 Identities=6% Similarity=-0.036 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCC-eeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQG-SVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~-~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.+|++|||+|||+|..++.+|+.+ .+|+++|+++.+++.+++|+..|+. .. ++.+...|..+..+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~----~~~~v~~~~~D~~~~l~--------- 277 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHL----DMANHQLVVMDVFDYFK--------- 277 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTC----CCTTEEEEESCHHHHHH---------
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC----CccceEEEECCHHHHHH---------
Confidence 467899999999999999999875 5999999999999999999999974 22 68888777543210
Q ss_pred ccccccccCccchhccCCeeEEEEeccccC------c---ccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYS------D---DLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~------~---~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
.......+||+|++.-..+. . ..+..+++.+.++|+++ +.++++..
T Consensus 278 ----------~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pg--G~l~~~~~ 332 (385)
T 2b78_A 278 ----------YARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN--GLIIASTN 332 (385)
T ss_dssp ----------HHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE--EEEEEEEC
T ss_pred ----------HHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCC--cEEEEEeC
Confidence 00011347999997433321 1 23444667777888664 66776653
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.6e-09 Score=94.21 Aligned_cols=104 Identities=18% Similarity=0.142 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++++|||+|||+|..++.+|+. +.+|+++|+++.+++.+++|+..++. ..++.+...|..+..+.
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~------- 125 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL----NDRVEVRTGLALDSLQQ------- 125 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCHHHHHHH-------
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcCHHHHHHH-------
Confidence 35789999999999999999987 68999999999999999999998764 35688887775432100
Q ss_pred CccccccccCccchh-c-cCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELK-E-VQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~-~-~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
.. . ..+||+|+..-. ......+++.+.++|++++ ++++
T Consensus 126 -------------~~~~~~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG--~lv~ 165 (223)
T 3duw_A 126 -------------IENEKYEPFDFIFIDAD---KQNNPAYFEWALKLSRPGT--VIIG 165 (223)
T ss_dssp -------------HHHTTCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTC--EEEE
T ss_pred -------------HHhcCCCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCc--EEEE
Confidence 00 1 147999986432 4567889999999998764 4444
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=98.96 E-value=2.4e-09 Score=94.38 Aligned_cols=104 Identities=12% Similarity=0.100 Sum_probs=78.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++++|||+|||+|..++.+|.. +.+|+++|+++.+++.+++|+..++. ..++.+...|+.+..+.
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~------- 131 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL----SDKIGLRLSPAKDTLAE------- 131 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCHHHHHHH-------
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC----CCceEEEeCCHHHHHHH-------
Confidence 35689999999999999999987 68999999999999999999998764 35688887775432100
Q ss_pred CccccccccCccchhc---cCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELKE---VQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~---~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
... ..+||+|+..- .......+++.+.++|+++ +.+++
T Consensus 132 -------------~~~~~~~~~fD~v~~~~---~~~~~~~~l~~~~~~L~pg--G~lv~ 172 (225)
T 3tr6_A 132 -------------LIHAGQAWQYDLIYIDA---DKANTDLYYEESLKLLREG--GLIAV 172 (225)
T ss_dssp -------------HHTTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEEEE--EEEEE
T ss_pred -------------hhhccCCCCccEEEECC---CHHHHHHHHHHHHHhcCCC--cEEEE
Confidence 000 15899999432 3556788999999999875 55555
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.95 E-value=5.1e-09 Score=94.01 Aligned_cols=100 Identities=16% Similarity=0.037 Sum_probs=78.1
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHc-cCCCCCCCeeEEEEecCCCCCCCCccC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLN-SGVFSHQGSVHVRDLNWMNPWPPIFSL 192 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N-~~~~~~~~~v~v~~ldW~~~~~~~~~~ 192 (330)
...++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..+ + ..++.+...|+.+..
T Consensus 93 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-----~~~v~~~~~d~~~~~------ 161 (258)
T 2pwy_A 93 DLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-----VENVRFHLGKLEEAE------ 161 (258)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-----CCCEEEEESCGGGCC------
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-----CCCEEEEECchhhcC------
Confidence 3457889999999999999999988 579999999999999999999987 5 256888887765431
Q ss_pred CCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 193 GNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 193 ~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
+ ....||+|++. ......+++.+.++|+++ +.+++
T Consensus 162 ----------------~-~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~g--G~l~~ 196 (258)
T 2pwy_A 162 ----------------L-EEAAYDGVALD-----LMEPWKVLEKAALALKPD--RFLVA 196 (258)
T ss_dssp ----------------C-CTTCEEEEEEE-----SSCGGGGHHHHHHHEEEE--EEEEE
T ss_pred ----------------C-CCCCcCEEEEC-----CcCHHHHHHHHHHhCCCC--CEEEE
Confidence 0 12479999973 345567889999999875 44444
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.4e-09 Score=96.71 Aligned_cols=104 Identities=14% Similarity=0.126 Sum_probs=80.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++++|||+|||+|..++.+|+. +.+|+++|+++.+++.+++|+..++. ..++.+...|..+..+.
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~----~~~v~~~~~d~~~~l~~------- 130 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV----DQRVTLREGPALQSLES------- 130 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC----TTTEEEEESCHHHHHHT-------
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcCHHHHHHh-------
Confidence 35789999999999999999987 67999999999999999999998774 35788888775442110
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
.....+||+|++. . .......+++.+.++|++|+ ++++
T Consensus 131 -------------~~~~~~fD~V~~d-~--~~~~~~~~l~~~~~~LkpGG--~lv~ 168 (248)
T 3tfw_A 131 -------------LGECPAFDLIFID-A--DKPNNPHYLRWALRYSRPGT--LIIG 168 (248)
T ss_dssp -------------CCSCCCCSEEEEC-S--CGGGHHHHHHHHHHTCCTTC--EEEE
T ss_pred -------------cCCCCCeEEEEEC-C--chHHHHHHHHHHHHhcCCCe--EEEE
Confidence 0112479999973 2 35567789999999998763 4544
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.95 E-value=3.6e-09 Score=94.24 Aligned_cols=101 Identities=14% Similarity=0.049 Sum_probs=76.4
Q ss_pred CCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCC-CeeEEEEecCCCCCCCCccCCCCC
Q 020158 121 GIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQ-GSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~-~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
+.+|||||||+|..++.+|+. +.+|+++|+++.+++.+++|+..++. . .++.+...|..+..+.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~----~~~~i~~~~gda~~~l~~-------- 124 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY----SPSRVRFLLSRPLDVMSR-------- 124 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC----CGGGEEEECSCHHHHGGG--------
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CcCcEEEEEcCHHHHHHH--------
Confidence 449999999999999999985 57999999999999999999998774 3 4788877654332100
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
. ..++||+|+..- .......+++.+.++|++| +++++
T Consensus 125 ------------~-~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpG--G~lv~ 161 (221)
T 3dr5_A 125 ------------L-ANDSYQLVFGQV---SPMDLKALVDAAWPLLRRG--GALVL 161 (221)
T ss_dssp ------------S-CTTCEEEEEECC---CTTTHHHHHHHHHHHEEEE--EEEEE
T ss_pred ------------h-cCCCcCeEEEcC---cHHHHHHHHHHHHHHcCCC--cEEEE
Confidence 0 135899998642 3456677899999999775 55555
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=4.9e-09 Score=93.50 Aligned_cols=112 Identities=15% Similarity=0.181 Sum_probs=82.1
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
.++..+.... ...++.+|||+|||+|..++.+++.+ .+|+++|+++.+++.+++|+..++. .++.+...|+
T Consensus 78 ~~~~~~~~~l---~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~v~~~~~d~ 149 (235)
T 1jg1_A 78 HMVAIMLEIA---NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGV-----KNVHVILGDG 149 (235)
T ss_dssp HHHHHHHHHH---TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCG
T ss_pred HHHHHHHHhc---CCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCcEEEECCc
Confidence 3444454443 34567899999999999999999886 8999999999999999999988763 4577777775
Q ss_pred CCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 183 MNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
... +....+||+|++..++.+.. +.+.++|+++ +.++++..
T Consensus 150 ~~~-----------------------~~~~~~fD~Ii~~~~~~~~~------~~~~~~L~pg--G~lvi~~~ 190 (235)
T 1jg1_A 150 SKG-----------------------FPPKAPYDVIIVTAGAPKIP------EPLIEQLKIG--GKLIIPVG 190 (235)
T ss_dssp GGC-----------------------CGGGCCEEEEEECSBBSSCC------HHHHHTEEEE--EEEEEEEC
T ss_pred ccC-----------------------CCCCCCccEEEECCcHHHHH------HHHHHhcCCC--cEEEEEEe
Confidence 222 11224699999998876533 3677888765 56666544
|
| >3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=4.3e-09 Score=93.52 Aligned_cols=108 Identities=12% Similarity=0.128 Sum_probs=79.7
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||||||+|..++.+|+. ...|+++|+++.+++.+++|+..++ ..++.+...|-.+..+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~-----l~nv~~~~~Da~~~l~---------- 98 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG-----LSNLRVMCHDAVEVLH---------- 98 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT-----CSSEEEECSCHHHHHH----------
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC-----CCcEEEEECCHHHHHH----------
Confidence 5679999999999999999987 4689999999999999999999887 3567777666332100
Q ss_pred cccccccCccchhccCCeeEEEEe--ccccCcccH------HHHHHHHHHhccCCCCeEEEEEee
Q 020158 198 SQERYSWNSSELKEVQRASVLLAA--DVIYSDDLT------DALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaa--DviY~~~~~------~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
..-....+|.|++. |..+..... ..+++.+.++|++| +.++++..
T Consensus 99 ----------~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpG--G~l~i~td 151 (218)
T 3dxy_A 99 ----------KMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLG--GVFHMATD 151 (218)
T ss_dssp ----------HHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEE--EEEEEEES
T ss_pred ----------HHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCC--cEEEEEeC
Confidence 00023579999987 554443332 36999999999875 56777543
|
| >3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=98.94 E-value=3.9e-09 Score=96.90 Aligned_cols=104 Identities=13% Similarity=0.064 Sum_probs=79.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..++.+|||+|||+|..++.+|+.+ .+|++.|+++.+++.+++|+..|+. .++.+...|..+. +
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l-----~~~~~~~~d~~~~-~-------- 182 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKL-----NNVIPILADNRDV-E-------- 182 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTC-----SSEEEEESCGGGC-C--------
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CCEEEEECChHHc-C--------
Confidence 3467899999999999999999984 4999999999999999999999984 4567777765543 1
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
...+||+|++.-.. ....++..+.++|+++ +.++++....
T Consensus 183 ---------------~~~~~D~Vi~d~p~----~~~~~l~~~~~~Lkpg--G~l~~s~~~~ 222 (272)
T 3a27_A 183 ---------------LKDVADRVIMGYVH----KTHKFLDKTFEFLKDR--GVIHYHETVA 222 (272)
T ss_dssp ---------------CTTCEEEEEECCCS----SGGGGHHHHHHHEEEE--EEEEEEEEEE
T ss_pred ---------------ccCCceEEEECCcc----cHHHHHHHHHHHcCCC--CEEEEEEcCc
Confidence 12479999876442 5566778888888764 5666654443
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.2e-09 Score=95.19 Aligned_cols=93 Identities=15% Similarity=0.075 Sum_probs=73.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..++.+++.+.+|+++|+++.+++.+++| . .++.+...|+.+..+.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~------~~~~~~~~d~~~~~~~---------- 106 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN----A------PHADVYEWNGKGELPA---------- 106 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH----C------TTSEEEECCSCSSCCT----------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh----C------CCceEEEcchhhccCC----------
Confidence 4678999999999999999999999999999999999999988 1 3578888888543221
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLY 250 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~ 250 (330)
...++||+|+++ .....+++.+.++|+++ +.++
T Consensus 107 -----------~~~~~fD~v~~~------~~~~~~l~~~~~~Lkpg--G~l~ 139 (226)
T 3m33_A 107 -----------GLGAPFGLIVSR------RGPTSVILRLPELAAPD--AHFL 139 (226)
T ss_dssp -----------TCCCCEEEEEEE------SCCSGGGGGHHHHEEEE--EEEE
T ss_pred -----------cCCCCEEEEEeC------CCHHHHHHHHHHHcCCC--cEEE
Confidence 013589999988 35567888899999875 4444
|
| >3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=9.2e-09 Score=95.65 Aligned_cols=114 Identities=11% Similarity=0.032 Sum_probs=81.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCC--CCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFS--HQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~--~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++...+..... ...++.+...|..+.....
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~------- 106 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLID------- 106 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTT-------
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhh-------
Confidence 6789999999999988888865 57999999999999999998876531000 0246888888876542000
Q ss_pred ccccccccCccchh-ccCCeeEEEEeccccCc----ccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 197 ASQERYSWNSSELK-EVQRASVLLAADVIYSD----DLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 197 ~~~~~~~w~~~~~~-~~~~~DlIlaaDviY~~----~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
.+. ...+||+|+++.++++. .....+++.+.++|+++ +.++++.
T Consensus 107 -----------~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkpg--G~li~~~ 155 (313)
T 3bgv_A 107 -----------KFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPG--GYFIGTT 155 (313)
T ss_dssp -----------TCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEE--EEEEEEE
T ss_pred -----------hcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCC--cEEEEec
Confidence 011 12479999999999764 34578999999999775 4555543
|
| >3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.3e-09 Score=105.20 Aligned_cols=99 Identities=12% Similarity=0.208 Sum_probs=77.3
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
...++++|||+|||+|..++.+|+.+ .+|+++|+++ +++.+++|+..|+. ..++.+...|+.+..
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl----~~~v~~~~~d~~~~~--------- 220 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNL----TDRIVVIPGKVEEVS--------- 220 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTC----TTTEEEEESCTTTCC---------
T ss_pred hhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCC----CCcEEEEECchhhCc---------
Confidence 34578999999999999999999885 5999999998 99999999999874 367999999887631
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLG 244 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~ 244 (330)
..++||+|++.-++|.. +.....+..+.++|+++
T Consensus 221 ---------------~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~Lkpg 256 (480)
T 3b3j_A 221 ---------------LPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPS 256 (480)
T ss_dssp ---------------CSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEE
T ss_pred ---------------cCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCC
Confidence 12479999997776643 23334445667888765
|
| >2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.9e-08 Score=89.51 Aligned_cols=107 Identities=15% Similarity=0.098 Sum_probs=77.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
...+.+|||+|||+|..++.+++. +.+|+++|+++.+++.+.+|+..| .++.+...|..+....
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-------~~v~~~~~d~~~~~~~------ 141 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-------TNIIPVIEDARHPHKY------ 141 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-------TTEEEECSCTTCGGGG------
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-------CCeEEEEcccCChhhh------
Confidence 346789999999999999999987 279999999999999888888875 3466666665542100
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
.....+||+|++ |+. .......++..+.++|+++ +.++++...
T Consensus 142 --------------~~~~~~~D~V~~-~~~-~~~~~~~~~~~~~~~Lkpg--G~l~i~~~~ 184 (233)
T 2ipx_A 142 --------------RMLIAMVDVIFA-DVA-QPDQTRIVALNAHTFLRNG--GHFVISIKA 184 (233)
T ss_dssp --------------GGGCCCEEEEEE-CCC-CTTHHHHHHHHHHHHEEEE--EEEEEEEEH
T ss_pred --------------cccCCcEEEEEE-cCC-CccHHHHHHHHHHHHcCCC--eEEEEEEcc
Confidence 001357999997 444 4555567788899999775 566665544
|
| >1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.9e-09 Score=97.17 Aligned_cols=46 Identities=22% Similarity=0.197 Sum_probs=42.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHh----CCeEEEEeCchHHHHHHHHHHHHc
Q 020158 120 NGIISLELGAGTGLAGILLSRV----AWTVFLTDHGNYILDNCAKNVQLN 165 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~----~~~V~~TD~~~~~L~~~~~Nv~~N 165 (330)
++.+|||+|||+|..++.++.. +.+|+++|+++.+++.++.|+..+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHh
Confidence 5679999999999999999886 579999999999999999998776
|
| >3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.5e-09 Score=92.69 Aligned_cols=100 Identities=12% Similarity=0.105 Sum_probs=77.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
++++|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++. ..++.+...|+.+..+.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~-------- 123 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL----IDRVELQVGDPLGIAAG-------- 123 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG----GGGEEEEESCHHHHHTT--------
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC----CceEEEEEecHHHHhcc--------
Confidence 5679999999999999999987 57999999999999999999987763 34678777765432110
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..+ ||+|++. ........+++.+.++|+++ +.+++
T Consensus 124 --------------~~~-fD~v~~~---~~~~~~~~~l~~~~~~Lkpg--G~lv~ 158 (210)
T 3c3p_A 124 --------------QRD-IDILFMD---CDVFNGADVLERMNRCLAKN--ALLIA 158 (210)
T ss_dssp --------------CCS-EEEEEEE---TTTSCHHHHHHHHGGGEEEE--EEEEE
T ss_pred --------------CCC-CCEEEEc---CChhhhHHHHHHHHHhcCCC--eEEEE
Confidence 124 9999875 33567788999999999875 45555
|
| >2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54 | Back alignment and structure |
|---|
Probab=98.92 E-value=2.1e-09 Score=96.84 Aligned_cols=61 Identities=18% Similarity=0.255 Sum_probs=52.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
++.+|||+|||+|..++.++.. +.+|+++|+++.+++.+++|+..|+. ..++.+...|..+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~ 127 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL----SDLIKVVKVPQKT 127 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCTTC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC----CccEEEEEcchhh
Confidence 5789999999999999888876 68999999999999999999999874 3458888877443
|
| >3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.9e-08 Score=96.06 Aligned_cols=97 Identities=12% Similarity=0.117 Sum_probs=80.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
-++.+|||+|||+|..++.+++. +.+++++|+ +.+++.+++++...+. ..++++...|+.+..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l----~~~v~~~~~d~~~~~---------- 265 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL----ADRCEILPGDFFETI---------- 265 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC----TTTEEEEECCTTTCC----------
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc----CCceEEeccCCCCCC----------
Confidence 35689999999999999999887 569999999 9999999999987653 467999999987431
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHH--HHHHHHHHhccCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTD--ALFHTLKRLMPLGS 245 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~--~l~~tl~~lL~~~~ 245 (330)
...||+|++..++++....+ .+++.+.++|++++
T Consensus 266 ---------------p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG 301 (369)
T 3gwz_A 266 ---------------PDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDS 301 (369)
T ss_dssp ---------------CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTC
T ss_pred ---------------CCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCC
Confidence 12699999999998766554 79999999998764
|
| >4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.92 E-value=6e-09 Score=100.80 Aligned_cols=97 Identities=11% Similarity=-0.071 Sum_probs=70.7
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
+|++|||+|||||..++.+|+.|++|+++|+++.+++.+++|+..|+.. . .+...|..+..+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~----~--~~~~~D~~~~l~------------ 275 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLR----V--DIRHGEALPTLR------------ 275 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC----C--EEEESCHHHHHH------------
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCC----C--cEEEccHHHHHH------------
Confidence 3899999999999999999999888999999999999999999999842 2 333333222100
Q ss_pred cccccCccchhccCCeeEEEEeccccCc---------ccHHHHHHHHHHhccCC
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSD---------DLTDALFHTLKRLMPLG 244 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~---------~~~~~l~~tl~~lL~~~ 244 (330)
.....||+|++.-..|.. .....++..+.++|+++
T Consensus 276 ----------~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpG 319 (393)
T 4dmg_A 276 ----------GLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEE 319 (393)
T ss_dssp ----------TCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEE
T ss_pred ----------HhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 012349999975433332 24467788888889775
|
| >2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.91 E-value=6.4e-09 Score=97.31 Aligned_cols=103 Identities=14% Similarity=0.175 Sum_probs=83.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||+|||+|..++.+++. +.+|+++|++ .+++.+++|+..++. ..++.+...|+.+..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~---------- 228 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV----ASRYHTIAGSAFEVD---------- 228 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC----GGGEEEEESCTTTSC----------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC----CcceEEEecccccCC----------
Confidence 45689999999999999999887 6799999999 999999999987763 356999999877631
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
....||+|++..++++. .....+++.+.++|+++ +.+++.
T Consensus 229 --------------~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg--G~l~i~ 270 (335)
T 2r3s_A 229 --------------YGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVE--GKVIVF 270 (335)
T ss_dssp --------------CCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred --------------CCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCC--cEEEEE
Confidence 11359999999999876 45578999999999875 444443
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.91 E-value=7.7e-09 Score=91.93 Aligned_cols=105 Identities=12% Similarity=0.116 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++. ..++.+...|+.+..+
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~--------- 119 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL----ESRIELLFGDALQLGE--------- 119 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSCGGGSHH---------
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECCHHHHHH---------
Confidence 35689999999999999999987 68999999999999999999998764 3467777776554210
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
......+||+|++.... .....+++.+.++|+++ +.+++.
T Consensus 120 -----------~~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pg--G~lv~~ 159 (233)
T 2gpy_A 120 -----------KLELYPLFDVLFIDAAK---GQYRRFFDMYSPMVRPG--GLILSD 159 (233)
T ss_dssp -----------HHTTSCCEEEEEEEGGG---SCHHHHHHHHGGGEEEE--EEEEEE
T ss_pred -----------hcccCCCccEEEECCCH---HHHHHHHHHHHHHcCCC--eEEEEE
Confidence 00012579999986553 36788899999999775 455553
|
| >1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.7e-08 Score=95.82 Aligned_cols=98 Identities=11% Similarity=0.080 Sum_probs=80.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..++.+|||+|||+|..++.+++. +.+|+++|+ +.+++.+++|+..++. ..++.+...|+.+..
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~--------- 253 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV----ADRMRGIAVDIYKES--------- 253 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC----TTTEEEEECCTTTSC---------
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC----CCCEEEEeCccccCC---------
Confidence 346789999999999999999887 569999999 9999999999988763 356899998877641
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGS 245 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~ 245 (330)
...+|+|+++.++++... ...+++.+.++|++++
T Consensus 254 ----------------~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG 289 (359)
T 1x19_A 254 ----------------YPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGG 289 (359)
T ss_dssp ----------------CCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTC
T ss_pred ----------------CCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCC
Confidence 123499999999987554 7889999999998764
|
| >2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=98.91 E-value=1e-08 Score=95.67 Aligned_cols=117 Identities=9% Similarity=-0.053 Sum_probs=75.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCC-CCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFS-HQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~-~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||||||+|.....++.. +.+|+++|+++.||+.++........... ..-.+.+...+...+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~----------- 116 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDT----------- 116 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSS-----------
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccch-----------
Confidence 4789999999999544434444 57999999999999999988765431100 0002344444432210
Q ss_pred cccccccCccch---hccCCeeEEEEeccccC---cccHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 198 SQERYSWNSSEL---KEVQRASVLLAADVIYS---DDLTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 198 ~~~~~~w~~~~~---~~~~~~DlIlaaDviY~---~~~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
+ ...+ ...++||+|++..++++ ......+++.+.++|++| +.++++...+
T Consensus 117 ------~-~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpG--G~~i~~~~~~ 172 (302)
T 2vdw_A 117 ------F-VSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASG--GKVLITTMDG 172 (302)
T ss_dssp ------H-HHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEE--EEEEEEEECH
T ss_pred ------h-hhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCC--CEEEEEeCCH
Confidence 0 0000 02358999999998853 346689999999999875 5566665544
|
| >1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=8.3e-09 Score=98.17 Aligned_cols=102 Identities=15% Similarity=0.078 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
-++.+|||+|||+|..++.+++. +.+++++|+ +.+++.+++|+..++. ..++.+...|+.+..
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~---------- 245 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL----ADRVTVAEGDFFKPL---------- 245 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC----TTTEEEEECCTTSCC----------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC----CCceEEEeCCCCCcC----------
Confidence 35789999999999999999887 469999999 9999999999988763 357899998876531
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccH--HHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLT--DALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~--~~l~~tl~~lL~~~~~~~i~va 252 (330)
...||+|++..++++.... ..+++.+.++|+++ +.+++.
T Consensus 246 ---------------~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pg--G~l~i~ 286 (374)
T 1qzz_A 246 ---------------PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPG--GRLLVL 286 (374)
T ss_dssp ---------------SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred ---------------CCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCC--cEEEEE
Confidence 1249999999999875544 48999999999875 444443
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=98.91 E-value=7.2e-09 Score=94.79 Aligned_cols=101 Identities=12% Similarity=0.064 Sum_probs=77.8
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
...++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++. ..++.+...|+.+..
T Consensus 109 ~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~------- 177 (277)
T 1o54_A 109 DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL----IERVTIKVRDISEGF------- 177 (277)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC----GGGEEEECCCGGGCC-------
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC----CCCEEEEECCHHHcc-------
Confidence 3456889999999999999999987 57999999999999999999988753 256777777765431
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
....||+|++ +......+++.+.++|+++ +.+++.
T Consensus 178 -----------------~~~~~D~V~~-----~~~~~~~~l~~~~~~L~pg--G~l~~~ 212 (277)
T 1o54_A 178 -----------------DEKDVDALFL-----DVPDPWNYIDKCWEALKGG--GRFATV 212 (277)
T ss_dssp -----------------SCCSEEEEEE-----CCSCGGGTHHHHHHHEEEE--EEEEEE
T ss_pred -----------------cCCccCEEEE-----CCcCHHHHHHHHHHHcCCC--CEEEEE
Confidence 1247999997 2345567888899999775 444443
|
| >1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.2e-08 Score=99.83 Aligned_cols=119 Identities=13% Similarity=0.083 Sum_probs=87.1
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
+..|.+++.... ....+.+|||||||+|..++.+|+.+.+|+++|+++.+++.+++|+..|+. .++.+...|
T Consensus 271 ~e~l~~~~~~~l---~~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~-----~~v~f~~~d 342 (433)
T 1uwv_A 271 NQKMVARALEWL---DVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGL-----QNVTFYHEN 342 (433)
T ss_dssp HHHHHHHHHHHH---TCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECC
T ss_pred HHHHHHHHHHhh---cCCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCC-----CceEEEECC
Confidence 555666666553 334678999999999999999999999999999999999999999999873 578999998
Q ss_pred CCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 182 WMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 182 W~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
+.+..+.. .....+||+|++ |.=|... ..+++.+.. .+++.++|++.
T Consensus 343 ~~~~l~~~-------------------~~~~~~fD~Vv~-dPPr~g~--~~~~~~l~~---~~p~~ivyvsc 389 (433)
T 1uwv_A 343 LEEDVTKQ-------------------PWAKNGFDKVLL-DPARAGA--AGVMQQIIK---LEPIRIVYVSC 389 (433)
T ss_dssp TTSCCSSS-------------------GGGTTCCSEEEE-CCCTTCC--HHHHHHHHH---HCCSEEEEEES
T ss_pred HHHHhhhh-------------------hhhcCCCCEEEE-CCCCccH--HHHHHHHHh---cCCCeEEEEEC
Confidence 87743211 001247999986 4444322 245555554 24578888865
|
| >3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=3.8e-09 Score=97.53 Aligned_cols=94 Identities=13% Similarity=0.137 Sum_probs=74.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
-+|.+|||+|||+|..|+.+|+.| ++|++.|++|.+++.+++|+++|+. .+++.+...|-.+..
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v----~~~v~~~~~D~~~~~----------- 188 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV----EDRMSAYNMDNRDFP----------- 188 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSCTTTCC-----------
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEeCcHHHhc-----------
Confidence 358999999999999999999986 5999999999999999999999986 467888887754431
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
....||.|+....-+.. .++....++|++|
T Consensus 189 -------------~~~~~D~Vi~~~p~~~~----~~l~~a~~~lk~g 218 (278)
T 3k6r_A 189 -------------GENIADRILMGYVVRTH----EFIPKALSIAKDG 218 (278)
T ss_dssp -------------CCSCEEEEEECCCSSGG----GGHHHHHHHEEEE
T ss_pred -------------cccCCCEEEECCCCcHH----HHHHHHHHHcCCC
Confidence 23579999977654443 3455556778764
|
| >3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.6e-08 Score=91.22 Aligned_cols=122 Identities=7% Similarity=-0.023 Sum_probs=82.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
....+|||||||+|.+++.++ -+.+|+++|+++.+++.++.|+..|+ .+..+...|-....+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g------~~~~~~v~D~~~~~~----------- 165 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKD------WDFTFALQDVLCAPP----------- 165 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTT------CEEEEEECCTTTSCC-----------
T ss_pred CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcC------CCceEEEeecccCCC-----------
Confidence 457899999999999999887 66799999999999999999999986 566777777655422
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEEEeeeeCcccccchhhhccccchhhh
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRS 276 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~va~~~R~~f~~~~~d~v~~~y~~f~~ 276 (330)
..++|+|++..++..-+ .-..+++.+. .|++ ..++|+.+.|.-.. .. ......|+.
T Consensus 166 -------------~~~~DvvLllk~lh~LE~q~~~~~~~ll~-aL~~---~~vvVsfPtksl~G---r~--~gm~~~Y~~ 223 (253)
T 3frh_A 166 -------------AEAGDLALIFKLLPLLEREQAGSAMALLQ-SLNT---PRMAVSFPTRSLGG---RG--KGMEANYAA 223 (253)
T ss_dssp -------------CCBCSEEEEESCHHHHHHHSTTHHHHHHH-HCBC---SEEEEEEECC----------------CHHH
T ss_pred -------------CCCcchHHHHHHHHHhhhhchhhHHHHHH-HhcC---CCEEEEcChHHhcC---CC--cchhhHHHH
Confidence 24899999998887643 2234444444 4433 35778887554321 11 123566666
Q ss_pred hhhh
Q 020158 277 YIME 280 (330)
Q Consensus 277 ~l~~ 280 (330)
++..
T Consensus 224 ~~e~ 227 (253)
T 3frh_A 224 WFEG 227 (253)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6664
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=98.89 E-value=5.7e-09 Score=93.29 Aligned_cols=118 Identities=12% Similarity=0.137 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++++|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++. ..++.+...|..+..+...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~----~~~v~~~~~d~~~~~~~~~----- 129 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL----ENKIFLKLGSALETLQVLI----- 129 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHHHH-----
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCCEEEEECCHHHHHHHHH-----
Confidence 35789999999999999999987 57999999999999999999988763 2457777766433100000
Q ss_pred CccccccccCccchhcc-CCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 196 SASQERYSWNSSELKEV-QRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~-~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.......|.+. +... .+||+|++. +.......+++.+.++|+++ +.+++.
T Consensus 130 -~~~~~~~~~~~-f~~~~~~fD~I~~~---~~~~~~~~~l~~~~~~L~pg--G~lv~~ 180 (239)
T 2hnk_A 130 -DSKSAPSWASD-FAFGPSSIDLFFLD---ADKENYPNYYPLILKLLKPG--GLLIAD 180 (239)
T ss_dssp -HCSSCCGGGTT-TCCSTTCEEEEEEC---SCGGGHHHHHHHHHHHEEEE--EEEEEE
T ss_pred -hhccccccccc-ccCCCCCcCEEEEe---CCHHHHHHHHHHHHHHcCCC--eEEEEE
Confidence 00000012211 1112 579999976 34566778999999999775 555553
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=1.1e-08 Score=92.50 Aligned_cols=100 Identities=12% Similarity=0.091 Sum_probs=76.8
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++++|||+|||+|..++.+|+. +.+|+++|+++.+++.+++|+..++. ..++.+...|..+..+
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~----~~~i~~~~gda~~~l~-------- 145 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV----DHKIDFREGPALPVLD-------- 145 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHH--------
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCCeEEEECCHHHHHH--------
Confidence 45689999999999999999987 67999999999999999999998763 3568887776543200
Q ss_pred CccccccccCccchh----ccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 196 SASQERYSWNSSELK----EVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~----~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
... ..++||+|++.- .......+++.+.++|++|+
T Consensus 146 ------------~l~~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG 184 (247)
T 1sui_A 146 ------------EMIKDEKNHGSYDFIFVDA---DKDNYLNYHKRLIDLVKVGG 184 (247)
T ss_dssp ------------HHHHSGGGTTCBSEEEECS---CSTTHHHHHHHHHHHBCTTC
T ss_pred ------------HHHhccCCCCCEEEEEEcC---chHHHHHHHHHHHHhCCCCe
Confidence 000 035799998642 24567889999999998764
|
| >3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.2e-08 Score=97.19 Aligned_cols=99 Identities=14% Similarity=0.071 Sum_probs=79.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+++|||+|||+|..++.+++. +.+|++.|+ +.+++.+++++..++. ..++.+...|..+...+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~--------- 244 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG----SERIHGHGANLLDRDVP--------- 244 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT----GGGEEEEECCCCSSSCC---------
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc----ccceEEEEccccccCCC---------
Confidence 5689999999999999999885 569999999 9999999999876542 36799999988764200
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGS 245 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~ 245 (330)
..+.||+|++..++++-. ....+++.+.+.|++++
T Consensus 245 -------------~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG 281 (363)
T 3dp7_A 245 -------------FPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDS 281 (363)
T ss_dssp -------------CCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred -------------CCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCc
Confidence 014799999999998643 44678999999998864
|
| >3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.89 E-value=5.8e-09 Score=99.08 Aligned_cols=110 Identities=15% Similarity=0.065 Sum_probs=83.0
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEe
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDL 180 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~l 180 (330)
.||..+.... ..-.+.+|||+|||+|...+.+|..+ .+|+++|+++.+++.++.|+..++. .++.+...
T Consensus 190 ~la~~l~~~~---~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~-----~~i~~~~~ 261 (354)
T 3tma_A 190 VLAQALLRLA---DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL-----SWIRFLRA 261 (354)
T ss_dssp HHHHHHHHHT---TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC-----TTCEEEEC
T ss_pred HHHHHHHHHh---CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC-----CceEEEeC
Confidence 4566665542 34467899999999999999999876 8999999999999999999999874 36888888
Q ss_pred cCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc---------ccHHHHHHHHHHhccCCC
Q 020158 181 NWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD---------DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 181 dW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~---------~~~~~l~~tl~~lL~~~~ 245 (330)
|..+... ....||+|++.-. |.. .....+++.+.++|++++
T Consensus 262 D~~~~~~-----------------------~~~~~D~Ii~npP-yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG 311 (354)
T 3tma_A 262 DARHLPR-----------------------FFPEVDRILANPP-HGLRLGRKEGLFHLYWDFLRGALALLPPGG 311 (354)
T ss_dssp CGGGGGG-----------------------TCCCCSEEEECCC-SCC----CHHHHHHHHHHHHHHHHTSCTTC
T ss_pred ChhhCcc-----------------------ccCCCCEEEECCC-CcCccCCcccHHHHHHHHHHHHHHhcCCCc
Confidence 7665311 1235899997533 332 234788999999998764
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=98.88 E-value=1.4e-08 Score=90.24 Aligned_cols=105 Identities=16% Similarity=0.163 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-C-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-A-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..+.+|||+|||+|..++.+|.. + .+|+++|+++.+++.++.|+..+ .++.+...|..+...
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------~~v~~~~~d~~~~~~--------- 136 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-------ENIIPILGDANKPQE--------- 136 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-------TTEEEEECCTTCGGG---------
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-------CCeEEEECCCCCccc---------
Confidence 46789999999999999999988 3 79999999999999999997654 356666666554200
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
+ ......||+|+ .|+ ..+.....+++.+.++|+++ +.++++..
T Consensus 137 -----~------~~~~~~~D~v~-~~~-~~~~~~~~~l~~~~~~Lkpg--G~l~i~~~ 179 (230)
T 1fbn_A 137 -----Y------ANIVEKVDVIY-EDV-AQPNQAEILIKNAKWFLKKG--GYGMIAIK 179 (230)
T ss_dssp -----G------TTTSCCEEEEE-ECC-CSTTHHHHHHHHHHHHEEEE--EEEEEEEE
T ss_pred -----c------cccCccEEEEE-Eec-CChhHHHHHHHHHHHhCCCC--cEEEEEEe
Confidence 0 00114799999 333 33445588899999999875 55666543
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=98.88 E-value=7.3e-09 Score=91.51 Aligned_cols=110 Identities=14% Similarity=0.119 Sum_probs=77.9
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCC-------eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAW-------TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIF 190 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~-------~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~ 190 (330)
..++.+|||+|||+|..++.+++... +|+++|+++.+++.+++|+..++.......++.+...|..+..+.
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-- 155 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE-- 155 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH--
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc--
Confidence 34678999999999999999998754 999999999999999999988751000014677777775543100
Q ss_pred cCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 191 SLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 191 ~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
......+||+|++...+.+ +++.+.++|+++ +.+++...
T Consensus 156 -----------------~~~~~~~fD~I~~~~~~~~------~~~~~~~~Lkpg--G~lv~~~~ 194 (227)
T 2pbf_A 156 -----------------EKKELGLFDAIHVGASASE------LPEILVDLLAEN--GKLIIPIE 194 (227)
T ss_dssp -----------------HHHHHCCEEEEEECSBBSS------CCHHHHHHEEEE--EEEEEEEE
T ss_pred -----------------cCccCCCcCEEEECCchHH------HHHHHHHhcCCC--cEEEEEEc
Confidence 0012357999999887763 347788899775 45555443
|
| >2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=7.1e-09 Score=95.57 Aligned_cols=113 Identities=13% Similarity=0.134 Sum_probs=72.7
Q ss_pred CCCCeEEEEcCccCHHHHHHH-----Hh-CCe--EEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLS-----RV-AWT--VFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIF 190 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA-----~~-~~~--V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~ 190 (330)
.++.+|||+|||+|..++.++ +. +.. ++++|.+++|++.+++++..... ..++.+. |.......
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~----~~~v~~~---~~~~~~~~- 122 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN----LENVKFA---WHKETSSE- 122 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS----CTTEEEE---EECSCHHH-
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC----CCcceEE---EEecchhh-
Confidence 356799999999996654322 21 343 39999999999999998865321 1334332 22210000
Q ss_pred cCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 191 SLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 191 ~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
. ...|.. -...++||+|+++.++++....+.+++.+.++|++| +.++++
T Consensus 123 -------~--~~~~~~--~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg--G~l~i~ 171 (292)
T 2aot_A 123 -------Y--QSRMLE--KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN--AKMLII 171 (292)
T ss_dssp -------H--HHHHHT--TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE--EEEEEE
T ss_pred -------h--hhhhcc--ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCC--cEEEEE
Confidence 0 000000 001357999999999999999999999999999886 444444
|
| >2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.3e-08 Score=95.38 Aligned_cols=100 Identities=13% Similarity=0.096 Sum_probs=80.0
Q ss_pred CCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
+.+|||+|||+|..++.+++. +.+++++|+ +.+++.+++|+..++. ..++.+...|+.+..
T Consensus 168 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~------------ 230 (334)
T 2ip2_A 168 GRSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA----GERVSLVGGDMLQEV------------ 230 (334)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH----TTSEEEEESCTTTCC------------
T ss_pred CCEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC----CCcEEEecCCCCCCC------------
Confidence 389999999999999998887 569999999 9999999999876543 357899998876631
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...||+|++..++++-. ....+++.+.++|+++ +.+++.
T Consensus 231 -------------~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pg--G~l~i~ 271 (334)
T 2ip2_A 231 -------------PSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGD--GRVVVI 271 (334)
T ss_dssp -------------CSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTT--CEEEEE
T ss_pred -------------CCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCC--CEEEEE
Confidence 13699999999997544 3458999999999876 344443
|
| >3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.9e-08 Score=94.40 Aligned_cols=96 Identities=15% Similarity=0.069 Sum_probs=79.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||+|||+|..++.+++. +.++++.|+ +.+++.+++++...+. ..++++...|+.++.+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~p---------- 233 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL----SGRAQVVVGSFFDPLP---------- 233 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC----TTTEEEEECCTTSCCC----------
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc----CcCeEEecCCCCCCCC----------
Confidence 3579999999999999988876 468999999 9999999999987653 4679999998874311
Q ss_pred cccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGS 245 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~ 245 (330)
..||+|++..++++... ...+++.+.++|++++
T Consensus 234 ---------------~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG 268 (332)
T 3i53_A 234 ---------------AGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGG 268 (332)
T ss_dssp ---------------CSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTC
T ss_pred ---------------CCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCC
Confidence 26999999999987555 5889999999998764
|
| >3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=98.87 E-value=6.1e-09 Score=91.45 Aligned_cols=108 Identities=11% Similarity=0.039 Sum_probs=71.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||+|||+|..++.+++. +.+|+++|+++.|++.+.+++..+..... ..++.+...|..+....
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~-~~~v~~~~~d~~~l~~~-------- 96 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG-LPNLLYLWATAERLPPL-------- 96 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC-CTTEEEEECCSTTCCSC--------
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC-CCceEEEecchhhCCCC--------
Confidence 35789999999999999999998 68999999999999876665544321111 34788888887663110
Q ss_pred ccccccccCccchhccCCeeEEE---Eecccc--CcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 197 ASQERYSWNSSELKEVQRASVLL---AADVIY--SDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIl---aaDviY--~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
... |.|. .....+ +......+++.+.++|+++ +.++++.
T Consensus 97 ---------------~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~ 140 (218)
T 3mq2_A 97 ---------------SGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPG--ASFLVAL 140 (218)
T ss_dssp ---------------CCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEE--EEEEEEE
T ss_pred ---------------CCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCC--cEEEEEe
Confidence 112 5555 111111 1222378899999999875 5555544
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.6e-08 Score=90.68 Aligned_cols=105 Identities=11% Similarity=0.051 Sum_probs=79.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++++|||+|||+|..++.+|+. +.+|+++|+++.+++.+++|+..++. ..++.+...|+.+..+.
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i~~~~gda~~~l~~------- 137 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV----EHKINFIESDAMLALDN------- 137 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHH-------
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcCHHHHHHH-------
Confidence 45689999999999999999987 67999999999999999999998763 35688887765432100
Q ss_pred CccccccccCccchh---ccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELK---EVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~---~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
... ..++||+|+.. ........+++.+.++|++| +++++
T Consensus 138 ------------l~~~~~~~~~fD~I~~d---~~~~~~~~~l~~~~~~L~pG--G~lv~ 179 (237)
T 3c3y_A 138 ------------LLQGQESEGSYDFGFVD---ADKPNYIKYHERLMKLVKVG--GIVAY 179 (237)
T ss_dssp ------------HHHSTTCTTCEEEEEEC---SCGGGHHHHHHHHHHHEEEE--EEEEE
T ss_pred ------------HHhccCCCCCcCEEEEC---CchHHHHHHHHHHHHhcCCC--eEEEE
Confidence 000 03579999964 34557788999999999775 45554
|
| >3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.4e-08 Score=97.93 Aligned_cols=111 Identities=14% Similarity=0.004 Sum_probs=81.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.++++|||+|||+|..++.+|+.+ .+|+++|+++.+++.+++|+..|+.. ..++.+...|..+..+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~---~~~v~~~~~D~~~~~~---------- 285 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLD---LSKAEFVRDDVFKLLR---------- 285 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC---GGGEEEEESCHHHHHH----------
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC---ccceEEEECCHHHHHH----------
Confidence 467899999999999999999985 69999999999999999999999730 1267887777544210
Q ss_pred cccccccCccchhccCCeeEEEEeccccCc---------ccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSD---------DLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~---------~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
.......+||+|++.-..+.. .....++..+.++|+++ ++++++.
T Consensus 286 ---------~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~ 339 (396)
T 3c0k_A 286 ---------TYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEG--GILLTFS 339 (396)
T ss_dssp ---------HHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEE--EEEEEEE
T ss_pred ---------HHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCC--cEEEEEe
Confidence 000013579999985433321 56678888888889764 5666654
|
| >1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.8e-08 Score=95.41 Aligned_cols=102 Identities=14% Similarity=0.154 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||+|||+|..++.+++.. .+++++|+ +.+++.+++|+..++. ..++.+...|+.+..
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~---------- 246 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL----SDRVDVVEGDFFEPL---------- 246 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC----TTTEEEEECCTTSCC----------
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC----CCceEEEeCCCCCCC----------
Confidence 357899999999999999998873 58999999 8999999999988763 357899999886531
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccH--HHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLT--DALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~--~~l~~tl~~lL~~~~~~~i~va 252 (330)
...||+|+++.++++.... ..+++.+.++|+++ +.+++.
T Consensus 247 ---------------~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pg--G~l~i~ 287 (360)
T 1tw3_A 247 ---------------PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG--GRILIH 287 (360)
T ss_dssp ---------------SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE--EEEEEE
T ss_pred ---------------CCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCC--cEEEEE
Confidence 1249999999999775543 57999999999875 445544
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=98.85 E-value=9.5e-09 Score=90.76 Aligned_cols=105 Identities=14% Similarity=0.114 Sum_probs=78.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++++|||+|||+|..++.+|+. +.+|+++|+++.+++.+++|+..++. ..++.+...|..+..+
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~----~~~i~~~~~d~~~~~~-------- 135 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA----EHKIDLRLKPALETLD-------- 135 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC----TTTEEEEESCHHHHHH--------
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC----CCeEEEEEcCHHHHHH--------
Confidence 46789999999999999999986 57999999999999999999998764 3567777766432100
Q ss_pred CccccccccCccchhc---cCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 196 SASQERYSWNSSELKE---VQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~---~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.+.. ..+||+|++.-. ......+++.+.++|+++ +++++.
T Consensus 136 ------------~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pg--G~lv~~ 178 (229)
T 2avd_A 136 ------------ELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPG--GILAVL 178 (229)
T ss_dssp ------------HHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEE--EEEEEE
T ss_pred ------------HHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCC--eEEEEE
Confidence 0101 157999997432 456678899999999775 455553
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=98.84 E-value=1.7e-08 Score=91.93 Aligned_cols=103 Identities=18% Similarity=0.123 Sum_probs=76.9
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHc-cCCCCCCCeeEEEEecCCCCCCCCccC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLN-SGVFSHQGSVHVRDLNWMNPWPPIFSL 192 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N-~~~~~~~~~v~v~~ldW~~~~~~~~~~ 192 (330)
....+.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..+ +.. ..++.+...|..+...
T Consensus 96 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~---~~~v~~~~~d~~~~~~----- 167 (280)
T 1i9g_A 96 DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP---PDNWRLVVSDLADSEL----- 167 (280)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC---CTTEEEECSCGGGCCC-----
T ss_pred CCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC---CCcEEEEECchHhcCC-----
Confidence 3456789999999999999999986 579999999999999999999887 311 2467777776554310
Q ss_pred CCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 193 GNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 193 ~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
....||+|++. ......+++.+.++|+++ +.+++.
T Consensus 168 ------------------~~~~~D~v~~~-----~~~~~~~l~~~~~~L~pg--G~l~~~ 202 (280)
T 1i9g_A 168 ------------------PDGSVDRAVLD-----MLAPWEVLDAVSRLLVAG--GVLMVY 202 (280)
T ss_dssp ------------------CTTCEEEEEEE-----SSCGGGGHHHHHHHEEEE--EEEEEE
T ss_pred ------------------CCCceeEEEEC-----CcCHHHHHHHHHHhCCCC--CEEEEE
Confidence 12479999982 234557889999999875 444443
|
| >3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.4e-08 Score=95.83 Aligned_cols=103 Identities=18% Similarity=0.141 Sum_probs=82.4
Q ss_pred CCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
+.+|||+|||+|..+..+++. +.++++.|+ +.+++.+++++..++. ..++++...|+.+..+.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~~v~~~~~d~~~~~~~---------- 244 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL----GGRVEFFEKNLLDARNF---------- 244 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC----GGGEEEEECCTTCGGGG----------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC----CCceEEEeCCcccCccc----------
Confidence 789999999999999998887 579999999 7899999999987653 35799999997764200
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
....||+|++..++++.. ....+++.+.+.|+++ +.+++.
T Consensus 245 ------------~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pg--G~l~i~ 286 (352)
T 3mcz_A 245 ------------EGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPG--GALLIL 286 (352)
T ss_dssp ------------TTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE--EEEEEE
T ss_pred ------------CCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCC--CEEEEE
Confidence 124699999999998654 4588999999999876 444443
|
| >3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.9e-09 Score=96.05 Aligned_cols=106 Identities=11% Similarity=0.059 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++++|||||||+|..++.+|+. +.+|+++|+++.+++.+++|+..++. ..++.+...|..+..+.
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i~~~~gda~~~l~~------- 127 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ----EHKIKLRLGPALDTLHS------- 127 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC----TTTEEEEESCHHHHHHH-------
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcCHHHHHHH-------
Confidence 45689999999999999999985 57999999999999999999998774 35788887764332000
Q ss_pred CccccccccCccchh--ccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 196 SASQERYSWNSSELK--EVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~--~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
... ..++||+|++.- .......+++.+.++|++| +++++.
T Consensus 128 ------------~~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpG--G~lv~d 169 (242)
T 3r3h_A 128 ------------LLNEGGEHQFDFIFIDA---DKTNYLNYYELALKLVTPK--GLIAID 169 (242)
T ss_dssp ------------HHHHHCSSCEEEEEEES---CGGGHHHHHHHHHHHEEEE--EEEEEE
T ss_pred ------------HhhccCCCCEeEEEEcC---ChHHhHHHHHHHHHhcCCC--eEEEEE
Confidence 000 036899998643 2556778899999999775 555553
|
| >1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A* | Back alignment and structure |
|---|
Probab=98.83 E-value=1.4e-08 Score=97.71 Aligned_cols=108 Identities=19% Similarity=0.153 Sum_probs=78.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++++|||+|||+|..++.+|..+.+|+++|+++.+++.+++|+..|+. .++.+...|..+..+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~-----~~~~~~~~d~~~~~~------------ 271 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGL-----GNVRVLEANAFDLLR------------ 271 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTC-----TTEEEEESCHHHHHH------------
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEECCHHHHHH------------
Confidence 778999999999999999998888999999999999999999999984 347777766443210
Q ss_pred cccccCccchhccCCeeEEEEeccccCc---------ccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSD---------DLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~---------~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
.......+||+|++.-..|.. .....++..+.++|+++ +.++++.
T Consensus 272 -------~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~ 325 (382)
T 1wxx_A 272 -------RLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG--GILATAS 325 (382)
T ss_dssp -------HHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE--EEEEEEE
T ss_pred -------HHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCC--CEEEEEE
Confidence 000013589999973332221 34567888888899764 5555543
|
| >2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51 | Back alignment and structure |
|---|
Probab=98.83 E-value=2.2e-08 Score=96.60 Aligned_cols=108 Identities=13% Similarity=0.032 Sum_probs=78.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 120 NGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
++++|||+|||+|..++.+|+.+ .+|+++|+++.+++.+++|+..|+. ..++.+...|..+..+.
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~----~~~v~~~~~d~~~~~~~---------- 282 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGV----EDRMKFIVGSAFEEMEK---------- 282 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHH----------
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCC----CccceEEECCHHHHHHH----------
Confidence 68899999999999999999985 5999999999999999999999974 23788887775442100
Q ss_pred ccccccCccchhccCCeeEEEEeccccCc---------ccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSD---------DLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~---------~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
......+||+|++.-..|.. .....++..+.++|+++ +.++++
T Consensus 283 ---------~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~lv~~ 334 (396)
T 2as0_A 283 ---------LQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG--GILVTC 334 (396)
T ss_dssp ---------HHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE--EEEEEE
T ss_pred ---------HHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC--cEEEEE
Confidence 00113579999974333332 34667788888888765 444443
|
| >2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638} | Back alignment and structure |
|---|
Probab=98.82 E-value=3.4e-08 Score=94.62 Aligned_cols=106 Identities=10% Similarity=0.052 Sum_probs=81.0
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..++++|||+| |+|..++.+++.+ .+|+++|+++.+++.+++|+..|+. .++.+...|+.+..+..
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~-----~~v~~~~~D~~~~l~~~------ 237 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY-----EDIEIFTFDLRKPLPDY------ 237 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC-----CCEEEECCCTTSCCCTT------
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCEEEEEChhhhhchhh------
Confidence 45789999999 9999999999885 5999999999999999999999873 37888888877632110
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
....||+|++.-+ |.......+++.+.++|++++...++.
T Consensus 238 ---------------~~~~fD~Vi~~~p-~~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 238 ---------------ALHKFDTFITDPP-ETLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp ---------------TSSCBSEEEECCC-SSHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred ---------------ccCCccEEEECCC-CchHHHHHHHHHHHHHcccCCeEEEEE
Confidence 1247999997643 443345788899999998865433333
|
| >1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=98.81 E-value=1.7e-08 Score=88.86 Aligned_cols=95 Identities=18% Similarity=0.126 Sum_probs=73.3
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcccc
Q 020158 121 GIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQE 200 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~ 200 (330)
+.+|||+|||+|..+..++.. +++|+++.+++.++.+ ++.+...|..+...
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~------------~~~~~~~d~~~~~~------------- 98 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR------------GVFVLKGTAENLPL------------- 98 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT------------TCEEEECBTTBCCS-------------
T ss_pred CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc------------CCEEEEcccccCCC-------------
Confidence 789999999999988877654 9999999999998876 13455555433210
Q ss_pred ccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeee
Q 020158 201 RYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKR 256 (330)
Q Consensus 201 ~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R 256 (330)
....||+|++..++++......+++.+.++|+++ +.++++...+
T Consensus 99 ----------~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg--G~l~i~~~~~ 142 (219)
T 1vlm_A 99 ----------KDESFDFALMVTTICFVDDPERALKEAYRILKKG--GYLIVGIVDR 142 (219)
T ss_dssp ----------CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEE--EEEEEEEECS
T ss_pred ----------CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCC--cEEEEEEeCC
Confidence 1247999999999999888999999999999775 5566654433
|
| >1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=1e-08 Score=94.48 Aligned_cols=108 Identities=15% Similarity=0.191 Sum_probs=75.5
Q ss_pred CCCeEEEEcCccCH----HHHHHHHh-C-----CeEEEEeCchHHHHHHHHHHHHcc-----------------CCC-C-
Q 020158 120 NGIISLELGAGTGL----AGILLSRV-A-----WTVFLTDHGNYILDNCAKNVQLNS-----------------GVF-S- 170 (330)
Q Consensus 120 ~g~~VLELG~GtGL----~gl~lA~~-~-----~~V~~TD~~~~~L~~~~~Nv~~N~-----------------~~~-~- 170 (330)
++.+|||+|||||- +++.++.. + .+|++||+++.||+.+++|+-... ... .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999997 66667665 3 489999999999999998852100 000 0
Q ss_pred -----C--CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhc
Q 020158 171 -----H--QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLM 241 (330)
Q Consensus 171 -----~--~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL 241 (330)
. ...|.+...|+.+..- ...++||+|+|.+|+.+. .....+++.+.+.|
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~----------------------~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L 242 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQY----------------------NVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLL 242 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSC----------------------CCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGE
T ss_pred ceeechhhcccCeEEecccCCCCC----------------------CcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHh
Confidence 0 1357888888776310 012479999999997543 34478999999999
Q ss_pred cCCCCeEEEE
Q 020158 242 PLGSKKVLYL 251 (330)
Q Consensus 242 ~~~~~~~i~v 251 (330)
++| +.+++
T Consensus 243 ~pg--G~L~l 250 (274)
T 1af7_A 243 KPD--GLLFA 250 (274)
T ss_dssp EEE--EEEEE
T ss_pred CCC--cEEEE
Confidence 765 56666
|
| >1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A | Back alignment and structure |
|---|
Probab=98.81 E-value=7.6e-08 Score=84.98 Aligned_cols=107 Identities=16% Similarity=0.119 Sum_probs=76.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
...+.+|||+|||+|..++.+++. + .+|+++|+++.+++.++.|+..+ .++.+...|..+....
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-------~~v~~~~~d~~~~~~~------ 137 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-------RNIVPILGDATKPEEY------ 137 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-------TTEEEEECCTTCGGGG------
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-------CCCEEEEccCCCcchh------
Confidence 346789999999999999999976 3 79999999999999999998654 3577777766542100
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
.....+||+|++ |.. .+.....+++.+.++|+++ +.+++....
T Consensus 138 --------------~~~~~~~D~v~~-~~~-~~~~~~~~l~~~~~~Lkpg--G~l~~~~~~ 180 (227)
T 1g8a_A 138 --------------RALVPKVDVIFE-DVA-QPTQAKILIDNAEVYLKRG--GYGMIAVKS 180 (227)
T ss_dssp --------------TTTCCCEEEEEE-CCC-STTHHHHHHHHHHHHEEEE--EEEEEEEEG
T ss_pred --------------hcccCCceEEEE-CCC-CHhHHHHHHHHHHHhcCCC--CEEEEEEec
Confidence 001247999996 443 3444556699999999875 455555433
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.4e-08 Score=90.58 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.++++|||+|||+|..++.+|+. +.+|+++|+++.+++.+++|+..++. ..++.+...|+.+..+
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~----~~~i~~~~~d~~~~l~-------- 138 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV----AEKISLRLGPALATLE-------- 138 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEESCHHHHHH--------
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEEcCHHHHHH--------
Confidence 35679999999999999999986 46999999999999999999988763 3467777766432100
Q ss_pred CccccccccCccchhc-c--CCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 196 SASQERYSWNSSELKE-V--QRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~-~--~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.+.. . .+||+|++.-. ......+++.+.++|+++ +++++.
T Consensus 139 ------------~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~Lkpg--G~lv~~ 181 (232)
T 3cbg_A 139 ------------QLTQGKPLPEFDLIFIDAD---KRNYPRYYEIGLNLLRRG--GLMVID 181 (232)
T ss_dssp ------------HHHTSSSCCCEEEEEECSC---GGGHHHHHHHHHHTEEEE--EEEEEE
T ss_pred ------------HHHhcCCCCCcCEEEECCC---HHHHHHHHHHHHHHcCCC--eEEEEe
Confidence 0000 1 57999986432 456788899999999765 555553
|
| >2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E | Back alignment and structure |
|---|
Probab=98.80 E-value=4.3e-08 Score=88.11 Aligned_cols=109 Identities=17% Similarity=0.130 Sum_probs=76.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCC---CCCeeEEEEecCCCCCCCCccCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFS---HQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~---~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
-++.+|||+|||+|..++.+|+.+ .+|+++|+++.+++.+++|+..|..... ...++.+...|..+..+..
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~---- 123 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNF---- 123 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGT----
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHh----
Confidence 367899999999999999999885 5899999999999999999988721100 0246888888766531100
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCccc-----------HHHHHHHHHHhccCCCCeEEEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDL-----------TDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~-----------~~~l~~tl~~lL~~~~~~~i~va 252 (330)
-....+|.|+.. +.+.. ...+++.+.++|++| +.+++.
T Consensus 124 ----------------~~~~~~d~v~~~---~p~p~~k~~~~~~r~~~~~~l~~~~~~Lkpg--G~l~~~ 172 (246)
T 2vdv_E 124 ----------------FEKGQLSKMFFC---FPDPHFKQRKHKARIITNTLLSEYAYVLKEG--GVVYTI 172 (246)
T ss_dssp ----------------SCTTCEEEEEEE---SCCCC------CSSCCCHHHHHHHHHHEEEE--EEEEEE
T ss_pred ----------------ccccccCEEEEE---CCCcccccchhHHhhccHHHHHHHHHHcCCC--CEEEEE
Confidence 013468888743 22221 158999999999875 556554
|
| >3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=6.6e-09 Score=94.67 Aligned_cols=136 Identities=4% Similarity=-0.031 Sum_probs=91.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
...+|||||||+|.+++.++.. ..+|++.|+++.+++.++.|+..|+. ...+...|.....
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~------~~~~~v~D~~~~~----------- 194 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV------PHRTNVADLLEDR----------- 194 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC------CEEEEECCTTTSC-----------
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC------CceEEEeeecccC-----------
Confidence 3579999999999999999877 47999999999999999999999973 3566666655442
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccH--HHHHHHHHHhccCCCCeEEEEEeeeeCcccccchhhhccccchhh
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLT--DALFHTLKRLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFR 275 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~--~~l~~tl~~lL~~~~~~~i~va~~~R~~f~~~~~d~v~~~y~~f~ 275 (330)
...++|+||+..++..-+.- ..++ .+...|++ +.++|+++.|.--. . -......|.
T Consensus 195 -------------p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~---~~vvVSfp~ksl~G---r--s~gm~~~Y~ 252 (281)
T 3lcv_B 195 -------------LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNS---PNIVVTFPTKSLGQ---R--SKGMFQNYS 252 (281)
T ss_dssp -------------CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSC---SEEEEEEECC------------CHHHHHH
T ss_pred -------------CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCC---CCEEEeccchhhcC---C--CcchhhHHH
Confidence 23589999999999874322 2445 34445533 35778888854221 1 112355666
Q ss_pred hhhhhhhcccccccccCCCeeeEEecC
Q 020158 276 SYIMEEGEHRRFERESFPAFVGKCIDL 302 (330)
Q Consensus 276 ~~l~~~~~~~~~~~~~~~~f~v~~i~~ 302 (330)
.+++.... ..||.++++..
T Consensus 253 ~~~e~~~~--------~~g~~~~~~~~ 271 (281)
T 3lcv_B 253 QSFESQAR--------ERSCRIQRLEI 271 (281)
T ss_dssp HHHHHHHH--------HHTCCEEEEEE
T ss_pred HHHHHHHH--------hcCCceeeeee
Confidence 66654321 23676666653
|
| >2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=5e-08 Score=95.24 Aligned_cols=99 Identities=18% Similarity=0.248 Sum_probs=77.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
..+.+|||||||+|..++.+|+.+.+|+++|+++.+++.+++|+..|+. . +.+...|..+..
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl-----~-v~~~~~d~~~~~------------ 350 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNV-----D-AEFEVASDREVS------------ 350 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----C-EEEEECCTTTCC------------
T ss_pred CCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCC-----c-EEEEECChHHcC------------
Confidence 4578999999999999999999999999999999999999999999973 4 788888766531
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
..+||+|++. .-+ ....+.+++.+.. ++ +++++|++.
T Consensus 351 -------------~~~fD~Vv~d-PPr-~g~~~~~~~~l~~-l~--p~givyvsc 387 (425)
T 2jjq_A 351 -------------VKGFDTVIVD-PPR-AGLHPRLVKRLNR-EK--PGVIVYVSC 387 (425)
T ss_dssp -------------CTTCSEEEEC-CCT-TCSCHHHHHHHHH-HC--CSEEEEEES
T ss_pred -------------ccCCCEEEEc-CCc-cchHHHHHHHHHh-cC--CCcEEEEEC
Confidence 1169999974 333 2344567777765 43 467888875
|
| >2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=1.2e-08 Score=96.38 Aligned_cols=96 Identities=13% Similarity=0.088 Sum_probs=75.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.+|.+|||+|||+|..++. |+.+.+|++.|+++.+++.+++|+..|+. ..++.+...|..+..
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l----~~~v~~~~~D~~~~~------------ 256 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKL----EHKIIPILSDVREVD------------ 256 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEESCGGGCC------------
T ss_pred CCCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCC----CCcEEEEECChHHhc------------
Confidence 3688999999999999999 88778999999999999999999999984 256888877755431
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
.+||+|++ |.-+. ...+++.+.++|+++ +.+++
T Consensus 257 --------------~~fD~Vi~-dpP~~---~~~~l~~~~~~L~~g--G~l~~ 289 (336)
T 2yx1_A 257 --------------VKGNRVIM-NLPKF---AHKFIDKALDIVEEG--GVIHY 289 (336)
T ss_dssp --------------CCEEEEEE-CCTTT---GGGGHHHHHHHEEEE--EEEEE
T ss_pred --------------CCCcEEEE-CCcHh---HHHHHHHHHHHcCCC--CEEEE
Confidence 47999997 43332 337788888889764 44444
|
| >1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32 | Back alignment and structure |
|---|
Probab=98.80 E-value=5.5e-08 Score=84.19 Aligned_cols=88 Identities=11% Similarity=0.047 Sum_probs=64.6
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..++.+|||+|||+|..++.++..+. +|+++|+++.+++.+++|+. ++.+...|..+.
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----------~~~~~~~d~~~~----------- 107 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----------GVNFMVADVSEI----------- 107 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----------TSEEEECCGGGC-----------
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----------CCEEEECcHHHC-----------
Confidence 35788999999999999999998854 79999999999999999874 345555554432
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhc
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLM 241 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL 241 (330)
...||+|++..+++... ....+++.+.+++
T Consensus 108 ---------------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 108 ---------------SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp ---------------CCCEEEEEECCCC-------CHHHHHHHHHHE
T ss_pred ---------------CCCeeEEEECCCchhccCchhHHHHHHHHHhc
Confidence 14799999987776543 2345666666666
|
| >3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=2.5e-08 Score=95.62 Aligned_cols=106 Identities=14% Similarity=0.115 Sum_probs=79.6
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC--eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW--TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~--~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
.++..|.... ...+.+|||+|||+|..++.+|..+. +|+++|+++.+++.++.|+..++. ..++.+...|
T Consensus 205 ~la~~l~~~~----~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl----~~~i~~~~~D 276 (373)
T 3tm4_A 205 SIANAMIELA----ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV----LDKIKFIQGD 276 (373)
T ss_dssp HHHHHHHHHH----TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC----GGGCEEEECC
T ss_pred HHHHHHHHhh----cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC----CCceEEEECC
Confidence 4555554441 24678999999999999999999976 999999999999999999999874 3578888887
Q ss_pred CCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc---------ccHHHHHHHHHHhc
Q 020158 182 WMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD---------DLTDALFHTLKRLM 241 (330)
Q Consensus 182 W~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~---------~~~~~l~~tl~~lL 241 (330)
..+... ....||+|++.-. |.. .+...+++.+.++|
T Consensus 277 ~~~~~~-----------------------~~~~fD~Ii~npP-yg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 277 ATQLSQ-----------------------YVDSVDFAISNLP-YGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp GGGGGG-----------------------TCSCEEEEEEECC-CC------CCHHHHHHHHHHHHHHHE
T ss_pred hhhCCc-----------------------ccCCcCEEEECCC-CCcccCcchhHHHHHHHHHHHHHHHc
Confidence 655310 1257999998543 332 12467888888888
|
| >1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31 | Back alignment and structure |
|---|
Probab=98.78 E-value=5.6e-08 Score=95.00 Aligned_cols=108 Identities=12% Similarity=0.127 Sum_probs=76.7
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh-C-CeEEEEeCchHHHHHH-------HHHHHHccCCCCCCCeeEEEEe-cCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV-A-WTVFLTDHGNYILDNC-------AKNVQLNSGVFSHQGSVHVRDL-NWMNPW 186 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~-~-~~V~~TD~~~~~L~~~-------~~Nv~~N~~~~~~~~~v~v~~l-dW~~~~ 186 (330)
....+.+|||||||+|..++.+|+. + .+|++.|+++.+++.+ +.|+..++.. ..++.+... ++...+
T Consensus 239 ~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~---~~nV~~i~gD~~~~~~ 315 (433)
T 1u2z_A 239 QLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR---LNNVEFSLKKSFVDNN 315 (433)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC---CCCEEEEESSCSTTCH
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC---CCceEEEEcCcccccc
Confidence 3457889999999999999999986 4 5899999999988888 8888876521 146776654 232210
Q ss_pred CCCccCCCCCccccccccCccch-hccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 187 PPIFSLGNSSASQERYSWNSSEL-KEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 187 ~~~~~~~~~~~~~~~~~w~~~~~-~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
.+ .....||+|+++.+++. .....+++.+.+.|++|+ .+++
T Consensus 316 ---------------------~~~~~~~~FDvIvvn~~l~~-~d~~~~L~el~r~LKpGG--~lVi 357 (433)
T 1u2z_A 316 ---------------------RVAELIPQCDVILVNNFLFD-EDLNKKVEKILQTAKVGC--KIIS 357 (433)
T ss_dssp ---------------------HHHHHGGGCSEEEECCTTCC-HHHHHHHHHHHTTCCTTC--EEEE
T ss_pred ---------------------ccccccCCCCEEEEeCcccc-ccHHHHHHHHHHhCCCCe--EEEE
Confidence 01 01357999998888864 455666788889998763 4444
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=2.4e-08 Score=83.35 Aligned_cols=118 Identities=10% Similarity=0.028 Sum_probs=78.3
Q ss_pred echHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCee
Q 020158 99 WKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSV 175 (330)
Q Consensus 99 W~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v 175 (330)
++++..+.+.+.... ...++.+|||+|||+|..++.+++. +.+|+++|+++ +++. .++
T Consensus 4 ~r~~~~l~~~~~~~~---~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------------~~~ 64 (180)
T 1ej0_A 4 SRAWFKLDEIQQSDK---LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------------VGV 64 (180)
T ss_dssp CHHHHHHHHHHHHHC---CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------TTE
T ss_pred hhHHHHHHHHHHHhC---CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------CcE
Confidence 345556666655442 3456789999999999999999887 37999999997 5421 346
Q ss_pred EEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccH-----------HHHHHHHHHhccCC
Q 020158 176 HVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLT-----------DALFHTLKRLMPLG 244 (330)
Q Consensus 176 ~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~-----------~~l~~tl~~lL~~~ 244 (330)
.+...|+.+.... ... . ..-...+||+|++..+++..... ..+++.+.++|+++
T Consensus 65 ~~~~~d~~~~~~~-----------~~~---~-~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g 129 (180)
T 1ej0_A 65 DFLQGDFRDELVM-----------KAL---L-ERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG 129 (180)
T ss_dssp EEEESCTTSHHHH-----------HHH---H-HHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred EEEEcccccchhh-----------hhh---h-ccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC
Confidence 6777766542000 000 0 00123579999998887765554 78899999999875
Q ss_pred CCeEEEEE
Q 020158 245 SKKVLYLA 252 (330)
Q Consensus 245 ~~~~i~va 252 (330)
+.+++.
T Consensus 130 --G~l~~~ 135 (180)
T 1ej0_A 130 --GSFVVK 135 (180)
T ss_dssp --EEEEEE
T ss_pred --cEEEEE
Confidence 445553
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=98.78 E-value=3.4e-08 Score=92.91 Aligned_cols=102 Identities=14% Similarity=0.031 Sum_probs=72.5
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHH-------ccCCCCCCCeeEEEEecCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQL-------NSGVFSHQGSVHVRDLNWMNPW 186 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~-------N~~~~~~~~~v~v~~ldW~~~~ 186 (330)
...+|.+|||+|||+|..++.+++. + .+|+++|+++.+++.+++|+.. |...- ...++.+...|..+..
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~-~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEE-WPDNVDFIHKDISGAT 180 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSC-CCCCEEEEESCTTCCC
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccc-cCCceEEEECChHHcc
Confidence 3467889999999999999999987 4 7999999999999999999984 33210 0256888888776542
Q ss_pred CCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 187 PPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 187 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
.. + ....||+|++.- .....+++.+.++|++++
T Consensus 181 ~~--------------------~-~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG 213 (336)
T 2b25_A 181 ED--------------------I-KSLTFDAVALDM-----LNPHVTLPVFYPHLKHGG 213 (336)
T ss_dssp ----------------------------EEEEEECS-----SSTTTTHHHHGGGEEEEE
T ss_pred cc--------------------c-CCCCeeEEEECC-----CCHHHHHHHHHHhcCCCc
Confidence 11 0 124699999742 222337888899998763
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.5e-08 Score=89.44 Aligned_cols=105 Identities=18% Similarity=0.219 Sum_probs=75.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
..++.+|||+|||+|..++.+++. + .+|+++|+++.+++.+++|+..++.......++.+...|.....
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-------- 146 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-------- 146 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC--------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc--------
Confidence 346789999999999999999887 3 69999999999999999999876420000146777777765321
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
....+||+|++..++.. +++.+.++|+++ +.++++.
T Consensus 147 ---------------~~~~~fD~i~~~~~~~~------~~~~~~~~Lkpg--G~lv~~~ 182 (226)
T 1i1n_A 147 ---------------AEEAPYDAIHVGAAAPV------VPQALIDQLKPG--GRLILPV 182 (226)
T ss_dssp ---------------GGGCCEEEEEECSBBSS------CCHHHHHTEEEE--EEEEEEE
T ss_pred ---------------ccCCCcCEEEECCchHH------HHHHHHHhcCCC--cEEEEEE
Confidence 11357999998877643 346778899775 4555543
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=98.77 E-value=5e-08 Score=86.32 Aligned_cols=104 Identities=12% Similarity=0.137 Sum_probs=74.8
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-C-------CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-A-------WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIF 190 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-~-------~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~ 190 (330)
.++.+|||+|||+|..+..+++. + .+|+++|+++.+++.+++|+..++.......++.+...|..+..
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---- 158 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY---- 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC----
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCC----
Confidence 46789999999999999988885 4 49999999999999999998765300000135777777655421
Q ss_pred cCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 191 SLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 191 ~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
....+||+|++...+.+. .+.+.++|+++ +.+++..
T Consensus 159 -------------------~~~~~fD~I~~~~~~~~~------~~~~~~~Lkpg--G~lvi~~ 194 (227)
T 1r18_A 159 -------------------PPNAPYNAIHVGAAAPDT------PTELINQLASG--GRLIVPV 194 (227)
T ss_dssp -------------------GGGCSEEEEEECSCBSSC------CHHHHHTEEEE--EEEEEEE
T ss_pred -------------------CcCCCccEEEECCchHHH------HHHHHHHhcCC--CEEEEEE
Confidence 122579999998887643 36778889765 5555544
|
| >4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=3.5e-08 Score=95.37 Aligned_cols=114 Identities=11% Similarity=0.086 Sum_probs=81.3
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
.+++.+.... ..-++.+|||+|||+|.....++..+.+|+++|+++.+++.++++ +. .. ....+.
T Consensus 94 ~~~~~l~~~~---~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~----~~-----~~---~~~~~~ 158 (416)
T 4e2x_A 94 MLARDFLATE---LTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK----GI-----RV---RTDFFE 158 (416)
T ss_dssp HHHHHHHHTT---TCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT----TC-----CE---ECSCCS
T ss_pred HHHHHHHHHh---CCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc----CC-----Cc---ceeeec
Confidence 4555555542 334678999999999999999999999999999999999988865 11 11 111111
Q ss_pred CCCCCCccCCCCCccccccccCccchh-ccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 184 NPWPPIFSLGNSSASQERYSWNSSELK-EVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~w~~~~~~-~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
... ...+. ..++||+|++..++++......+++.+.++|+++ +.+++..
T Consensus 159 ~~~-------------------~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~Lkpg--G~l~i~~ 208 (416)
T 4e2x_A 159 KAT-------------------ADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPD--GVFVFED 208 (416)
T ss_dssp HHH-------------------HHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEE--EEEEEEE
T ss_pred hhh-------------------HhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCC--eEEEEEe
Confidence 000 00011 2368999999999999999999999999999875 5566653
|
| >3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A | Back alignment and structure |
|---|
Probab=98.75 E-value=5.2e-08 Score=89.30 Aligned_cols=113 Identities=10% Similarity=-0.032 Sum_probs=79.2
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--C-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--A-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
++.+++..+ ...+|.+|||+|||+|..++.+|.. + .+|++.|+++.+++.+++|+..++. .++.+
T Consensus 71 ~s~l~~~~l-------~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~-----~~v~~ 138 (274)
T 3ajd_A 71 SSMIPPIVL-------NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV-----LNTII 138 (274)
T ss_dssp GGGHHHHHH-------CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEE
T ss_pred HHHHHHHHh-------CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC-----CcEEE
Confidence 444555554 2346789999999999999988874 4 7999999999999999999999873 46777
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC------------------cccHHHHHHHHHH
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS------------------DDLTDALFHTLKR 239 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~------------------~~~~~~l~~tl~~ 239 (330)
...|..+... ........||+|++.-.+.. ......+++.+.+
T Consensus 139 ~~~D~~~~~~-------------------~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~ 199 (274)
T 3ajd_A 139 INADMRKYKD-------------------YLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGID 199 (274)
T ss_dssp EESCHHHHHH-------------------HHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHH
T ss_pred EeCChHhcch-------------------hhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 7766433200 00001357999997422111 1456788999999
Q ss_pred hccCC
Q 020158 240 LMPLG 244 (330)
Q Consensus 240 lL~~~ 244 (330)
+|++|
T Consensus 200 ~Lkpg 204 (274)
T 3ajd_A 200 LLKKD 204 (274)
T ss_dssp HEEEE
T ss_pred hCCCC
Confidence 99875
|
| >3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=98.75 E-value=4.9e-09 Score=94.21 Aligned_cols=62 Identities=21% Similarity=0.202 Sum_probs=50.6
Q ss_pred EeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHH
Q 020158 97 QVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKN 161 (330)
Q Consensus 97 ~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~N 161 (330)
.+.+++.-|...|... ....++++|||||||||..+..+++.+ .+|+++|+++.|++.+++|
T Consensus 17 yvsrg~~kL~~~L~~~---~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~ 79 (232)
T 3opn_A 17 YVSRGGLKLEKALKEF---HLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRS 79 (232)
T ss_dssp SSSTTHHHHHHHHHHT---TCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHT
T ss_pred ccCCcHHHHHHHHHHc---CCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHh
Confidence 3456777887776654 245678999999999999999999987 5999999999999886654
|
| >3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.74 E-value=5.5e-08 Score=93.07 Aligned_cols=72 Identities=17% Similarity=0.112 Sum_probs=59.6
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
..|..++.... ...+.+|||||||+|..++.+|+.+.+|+++|+++.+++.+++|+..|+. .++.+...|.
T Consensus 200 ~~l~~~~~~~~----~~~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~-----~~v~~~~~d~ 270 (369)
T 3bt7_A 200 IQMLEWALDVT----KGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHI-----DNVQIIRMAA 270 (369)
T ss_dssp HHHHHHHHHHT----TTCCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTC-----CSEEEECCCS
T ss_pred HHHHHHHHHHh----hcCCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEECCH
Confidence 56677776653 23467899999999999999999888999999999999999999999983 4677777664
Q ss_pred C
Q 020158 183 M 183 (330)
Q Consensus 183 ~ 183 (330)
.
T Consensus 271 ~ 271 (369)
T 3bt7_A 271 E 271 (369)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.5e-07 Score=84.53 Aligned_cols=131 Identities=18% Similarity=0.150 Sum_probs=82.3
Q ss_pred CeEeechHH-HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCC
Q 020158 95 GLQVWKAEL-VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFS 170 (330)
Q Consensus 95 G~~vW~aa~-~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~ 170 (330)
....|..-. -++..|+.....-..-+|.+|||||||+|..+..+|.. + .+|++.|+++.++..+...+..+
T Consensus 50 ~yr~w~~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----- 124 (232)
T 3id6_C 50 EYREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----- 124 (232)
T ss_dssp EEEECCTTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-----
T ss_pred chhhhchHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-----
Confidence 466775532 34555554431113457899999999999999888876 2 49999999999986665544432
Q ss_pred CCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEE
Q 020158 171 HQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLY 250 (330)
Q Consensus 171 ~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~ 250 (330)
.++.+...|-...... .....+||+|++. +.. +.....+...+.++|+++ +.++
T Consensus 125 --~nv~~i~~Da~~~~~~--------------------~~~~~~~D~I~~d-~a~-~~~~~il~~~~~~~LkpG--G~lv 178 (232)
T 3id6_C 125 --PNIFPLLADARFPQSY--------------------KSVVENVDVLYVD-IAQ-PDQTDIAIYNAKFFLKVN--GDML 178 (232)
T ss_dssp --TTEEEEECCTTCGGGT--------------------TTTCCCEEEEEEC-CCC-TTHHHHHHHHHHHHEEEE--EEEE
T ss_pred --CCeEEEEcccccchhh--------------------hccccceEEEEec-CCC-hhHHHHHHHHHHHhCCCC--eEEE
Confidence 3566666664432100 0012579999864 433 555666777788899775 4555
Q ss_pred EEeeee
Q 020158 251 LALEKR 256 (330)
Q Consensus 251 va~~~R 256 (330)
++.+.+
T Consensus 179 isik~~ 184 (232)
T 3id6_C 179 LVIKAR 184 (232)
T ss_dssp EEEC--
T ss_pred EEEccC
Confidence 554333
|
| >1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=98.73 E-value=1.1e-07 Score=88.91 Aligned_cols=98 Identities=14% Similarity=0.051 Sum_probs=72.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..|.+|||+|||+|..++.+|.. +.+|++.|+++.+++.+++|+..++. .++.+...|..+..
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~-----~~v~~~~~D~~~~~--------- 182 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV-----LNVILFHSSSLHIG--------- 182 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC-----CSEEEESSCGGGGG---------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC-----CeEEEEECChhhcc---------
Confidence 46789999999999999998876 36899999999999999999999873 45777766644320
Q ss_pred CccccccccCccchhccCCeeEEEEecc------ccCcc----------------cHHHHHHHHHHhccCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADV------IYSDD----------------LTDALFHTLKRLMPLG 244 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDv------iY~~~----------------~~~~l~~tl~~lL~~~ 244 (330)
.....||+|++.-. +.... ....+++.+.++|++|
T Consensus 183 --------------~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG 239 (315)
T 1ixk_A 183 --------------ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG 239 (315)
T ss_dssp --------------GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred --------------cccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 01247999997321 21111 1257888899999875
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=9.1e-08 Score=92.65 Aligned_cols=102 Identities=9% Similarity=0.144 Sum_probs=73.6
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh-CC-eEEEEeCchHHHHHHHHHHH-------HccCCCCCCCeeEEEEecCCCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV-AW-TVFLTDHGNYILDNCAKNVQ-------LNSGVFSHQGSVHVRDLNWMNPWPP 188 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~-~~-~V~~TD~~~~~L~~~~~Nv~-------~N~~~~~~~~~v~v~~ldW~~~~~~ 188 (330)
.-.|.+|||||||+|-+.+.+|.. +. +|++.|+++.+++.+++|++ .++.. ..++.+...|..+..
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~---~~rVefi~GD~~~lp-- 245 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK---HAEYTLERGDFLSEE-- 245 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC---CCEEEEEECCTTSHH--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC---CCCeEEEECcccCCc--
Confidence 346789999999999999988865 44 69999999999999988764 23321 257888888866531
Q ss_pred CccCCCCCccccccccCccchh-ccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 189 IFSLGNSSASQERYSWNSSELK-EVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 189 ~~~~~~~~~~~~~~~w~~~~~~-~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
+. ....+|+|++..++|.++ ....+..+.+.|++|+
T Consensus 246 --------------------~~d~~~~aDVVf~Nn~~F~pd-l~~aL~Ei~RvLKPGG 282 (438)
T 3uwp_A 246 --------------------WRERIANTSVIFVNNFAFGPE-VDHQLKERFANMKEGG 282 (438)
T ss_dssp --------------------HHHHHHTCSEEEECCTTCCHH-HHHHHHHHHTTSCTTC
T ss_pred --------------------cccccCCccEEEEcccccCch-HHHHHHHHHHcCCCCc
Confidence 10 114799999887766544 4444566778887763
|
| >2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=98.72 E-value=6.6e-08 Score=89.95 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=54.9
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
+++.+.... ....+.+|||+|||+|..++.++..+.+|+++|+++.+++.+++|+..++ ..++.+...|+.+
T Consensus 30 i~~~i~~~~---~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~-----~~~v~~~~~D~~~ 101 (299)
T 2h1r_A 30 ILDKIIYAA---KIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEG-----YNNLEVYEGDAIK 101 (299)
T ss_dssp HHHHHHHHH---CCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTT-----CCCEEC----CCS
T ss_pred HHHHHHHhc---CCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcC-----CCceEEEECchhh
Confidence 344554443 34567899999999999999999999999999999999999999998765 2467777776654
|
| >3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.1e-07 Score=85.22 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=74.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCC-CCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGV-FSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~-~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
++.+|||||||+|...+.+|+. +..|+++|+++.+++.++.|+...... .....++.+...|..+..+.
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~-------- 117 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPN-------- 117 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHH--------
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhh--------
Confidence 4568999999999999999987 468999999999999999988642100 00035688888876542110
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCccc-----------HHHHHHHHHHhccCCCCeEEEEEe
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDL-----------TDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~-----------~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
.-....+|.|+.. |.+.. ...+++.+.++|++| +.+++..
T Consensus 118 ------------~~~~~~~D~v~~~---~~dp~~k~~h~krr~~~~~~l~~~~~~LkpG--G~l~~~t 168 (235)
T 3ckk_A 118 ------------FFYKGQLTKMFFL---FPDPHFKRTKHKWRIISPTLLAEYAYVLRVG--GLVYTIT 168 (235)
T ss_dssp ------------HCCTTCEEEEEEE---SCC-----------CCCHHHHHHHHHHEEEE--EEEEEEE
T ss_pred ------------hCCCcCeeEEEEe---CCCchhhhhhhhhhhhhHHHHHHHHHHCCCC--CEEEEEe
Confidence 0013579998753 22211 257999999999875 5666653
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=98.70 E-value=9.1e-08 Score=86.58 Aligned_cols=95 Identities=15% Similarity=0.082 Sum_probs=70.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++. .++.+...|+.+..
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----------~~~~~~~~d~~~~~---------- 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----------PQVTFCVASSHRLP---------- 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTSCS----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----------CCcEEEEcchhhCC----------
Confidence 35789999999999999999887 689999999999999988764 23566666655421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEK 255 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~ 255 (330)
. ..++||+|++.++. .+++.+.++|+++ +.+++....
T Consensus 144 ------------~-~~~~fD~v~~~~~~-------~~l~~~~~~L~pg--G~l~~~~~~ 180 (269)
T 1p91_A 144 ------------F-SDTSMDAIIRIYAP-------CKAEELARVVKPG--GWVITATPG 180 (269)
T ss_dssp ------------B-CTTCEEEEEEESCC-------CCHHHHHHHEEEE--EEEEEEEEC
T ss_pred ------------C-CCCceeEEEEeCCh-------hhHHHHHHhcCCC--cEEEEEEcC
Confidence 0 12479999987652 3578889999875 445554433
|
| >2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.4e-07 Score=86.61 Aligned_cols=112 Identities=13% Similarity=0.120 Sum_probs=78.7
Q ss_pred CCeEEEEcCcc---CHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 121 GIISLELGAGT---GLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 121 g~~VLELG~Gt---GL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..+|||||||+ |.....+++. +.+|+++|+++.||+.+++++.. ..++.+...|..+......
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-------~~~v~~~~~D~~~~~~~~~----- 145 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-------DPNTAVFTADVRDPEYILN----- 145 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-------CTTEEEEECCTTCHHHHHH-----
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-------CCCeEEEEeeCCCchhhhc-----
Confidence 47999999999 9777666655 57999999999999999998842 2568888888665310000
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCCCeEEEEEe
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
.+. . ...+ ...+||+|++..++++... ...+++.+.+.|++|+ .++++.
T Consensus 146 -~~~----~-~~~~-d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG--~l~i~~ 196 (274)
T 2qe6_A 146 -HPD----V-RRMI-DFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGS--YLFMTS 196 (274)
T ss_dssp -SHH----H-HHHC-CTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTC--EEEEEE
T ss_pred -cch----h-hccC-CCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCc--EEEEEE
Confidence 000 0 0000 1247999999999987554 8899999999998764 444443
|
| >3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=98.69 E-value=3e-08 Score=92.08 Aligned_cols=117 Identities=17% Similarity=0.192 Sum_probs=77.8
Q ss_pred EeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCee
Q 020158 97 QVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSV 175 (330)
Q Consensus 97 ~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v 175 (330)
.|-++++-|...|... .....|++|||+|||||..+..+++.+ .+|++.|+++.||+...++ . .++
T Consensus 65 yvsrg~~Kl~~~l~~~---~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~----~------~rv 131 (291)
T 3hp7_A 65 YVSRGGLKLEKALAVF---NLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ----D------DRV 131 (291)
T ss_dssp SSSTTHHHHHHHHHHT---TCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT----C------TTE
T ss_pred cccchHHHHHHHHHhc---CCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----C------ccc
Confidence 4667888888877655 245688999999999999999998886 5999999999999874332 1 122
Q ss_pred EEEE-ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEE
Q 020158 176 HVRD-LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVL 249 (330)
Q Consensus 176 ~v~~-ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i 249 (330)
.... .+.... ....+ ....||+|++ |+.+. .+..++..+.++|++++..++
T Consensus 132 ~~~~~~ni~~l-------------------~~~~l-~~~~fD~v~~-d~sf~--sl~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 132 RSMEQYNFRYA-------------------EPVDF-TEGLPSFASI-DVSFI--SLNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp EEECSCCGGGC-------------------CGGGC-TTCCCSEEEE-CCSSS--CGGGTHHHHHHHSCTTCEEEE
T ss_pred ceecccCceec-------------------chhhC-CCCCCCEEEE-EeeHh--hHHHHHHHHHHHcCcCCEEEE
Confidence 2111 111000 00001 1124999986 55554 458899999999998755444
|
| >2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=6.3e-08 Score=93.16 Aligned_cols=106 Identities=19% Similarity=0.103 Sum_probs=75.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCC----------CCCeeEEEEecCCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFS----------HQGSVHVRDLNWMNPWP 187 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~----------~~~~v~v~~ldW~~~~~ 187 (330)
++.+|||+|||+|..|+.+|+. +.+|++.|+++.+++.+++|++.|..... ...++.+...|..+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~- 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM- 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH-
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH-
Confidence 6789999999999999999987 36899999999999999999999921000 0123666665543210
Q ss_pred CCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 188 PIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 188 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
. .....||+|+ .|..+. ...+++...++++++ +.+++..
T Consensus 126 ---------------~------~~~~~fD~I~-lDP~~~---~~~~l~~a~~~lk~g--G~l~vt~ 164 (378)
T 2dul_A 126 ---------------A------ERHRYFHFID-LDPFGS---PMEFLDTALRSAKRR--GILGVTA 164 (378)
T ss_dssp ---------------H------HSTTCEEEEE-ECCSSC---CHHHHHHHHHHEEEE--EEEEEEE
T ss_pred ---------------H------hccCCCCEEE-eCCCCC---HHHHHHHHHHhcCCC--CEEEEEe
Confidence 0 0124799999 677443 357788888888764 4676655
|
| >3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.67 E-value=3.6e-08 Score=95.65 Aligned_cols=73 Identities=15% Similarity=0.154 Sum_probs=60.2
Q ss_pred hHHHHHHHHhhhcCCCCCCC-CCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHc--cCCCCCCCeeEE
Q 020158 101 AELVLADFVMHKMCTSSDFN-GIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLN--SGVFSHQGSVHV 177 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~-g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N--~~~~~~~~~v~v 177 (330)
++...|.|... .++ |.+|||||||+|..++.+|+.+.+|+++|+++.+++.++.|+..| + ..++.+
T Consensus 79 t~e~vA~~~a~------~l~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~g-----l~~i~~ 147 (410)
T 3ll7_A 79 SGAVTSSYKSR------FIREGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNE-----GKDVNI 147 (410)
T ss_dssp CCHHHHHHGGG------GSCTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCT-----TCEEEE
T ss_pred CHHHHHHHHHH------hcCCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccC-----CCcEEE
Confidence 34556666432 233 899999999999999999999999999999999999999999988 5 257888
Q ss_pred EEecCCC
Q 020158 178 RDLNWMN 184 (330)
Q Consensus 178 ~~ldW~~ 184 (330)
...|..+
T Consensus 148 i~~Da~~ 154 (410)
T 3ll7_A 148 LTGDFKE 154 (410)
T ss_dssp EESCGGG
T ss_pred EECcHHH
Confidence 8887654
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=98.65 E-value=4.5e-08 Score=89.99 Aligned_cols=107 Identities=14% Similarity=0.127 Sum_probs=76.1
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
++++|||||||+|..+..+++. ..+|++.|+++.+++.+++|+........ ..++++...|..+..+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~-~~rv~v~~~D~~~~l~---------- 143 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLD-DPRVDVQVDDGFMHIA---------- 143 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTT-STTEEEEESCSHHHHH----------
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccC-CCceEEEECcHHHHHh----------
Confidence 5689999999999999999887 37999999999999999999854211111 3567777766332100
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc-----cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD-----LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~-----~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...++||+|++ |..+... ....+++.+.++|+++ +++++.
T Consensus 144 ------------~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~~~~~~~~L~pg--G~lv~~ 188 (275)
T 1iy9_A 144 ------------KSENQYDVIMV-DSTEPVGPAVNLFTKGFYAGIAKALKED--GIFVAQ 188 (275)
T ss_dssp ------------TCCSCEEEEEE-SCSSCCSCCCCCSTTHHHHHHHHHEEEE--EEEEEE
T ss_pred ------------hCCCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCC--cEEEEE
Confidence 01357999997 6654321 2468999999999765 555553
|
| >1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=98.63 E-value=3.9e-07 Score=84.07 Aligned_cols=74 Identities=19% Similarity=0.156 Sum_probs=59.1
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
+++.+.... ...++.+|||+|||+|..+..++..+.+|+++|+++.+++.+++|+..++. ..++.+...|..+
T Consensus 16 i~~~i~~~~---~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 16 IINSIIDKA---ALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPV----ASKLQVLVGDVLK 88 (285)
T ss_dssp HHHHHHHHT---CCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTT----GGGEEEEESCTTT
T ss_pred HHHHHHHhc---CCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCC----CCceEEEEcceec
Confidence 445555543 345678999999999999999999999999999999999999999876542 2578888888765
Q ss_pred C
Q 020158 185 P 185 (330)
Q Consensus 185 ~ 185 (330)
.
T Consensus 89 ~ 89 (285)
T 1zq9_A 89 T 89 (285)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=98.62 E-value=3.4e-08 Score=93.47 Aligned_cols=110 Identities=13% Similarity=0.073 Sum_probs=76.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++++|||||||+|..++.+++. ..+|+++|+++.+++.+++|+......+. ..++++...|+.+..+.
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~-~~rv~~~~~D~~~~l~~-------- 189 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE-DPRVNLVIGDGVAFLKN-------- 189 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG-STTEEEEESCHHHHHHT--------
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC-CCcEEEEECCHHHHHHh--------
Confidence 35689999999999999999987 47999999999999999999875310000 25688887775432000
Q ss_pred ccccccccCccchhccCCeeEEEEe--ccccCcc--cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAA--DVIYSDD--LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaa--DviY~~~--~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
. ...+||+|++. +...... ....+++.+.++|+++ +++++.
T Consensus 190 ------------~-~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg--G~lv~~ 234 (334)
T 1xj5_A 190 ------------A-AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG--GVVCTQ 234 (334)
T ss_dssp ------------S-CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE--EEEEEE
T ss_pred ------------c-cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC--cEEEEe
Confidence 0 12479999972 2122111 1478999999999765 555553
|
| >3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=2.3e-08 Score=89.21 Aligned_cols=61 Identities=15% Similarity=0.007 Sum_probs=47.7
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCc-hHHHHHH---HHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHG-NYILDNC---AKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~-~~~L~~~---~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.+.+|||||||+|..++.+|+. +.+|+++|++ +.|++.+ ++|+..++ ..++.+...|..+.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~-----~~~v~~~~~d~~~l 90 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG-----LSNVVFVIAAAESL 90 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC-----CSSEEEECCBTTBC
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC-----CCCeEEEEcCHHHh
Confidence 5679999999999999999854 6789999999 6777776 77766554 35677777776543
|
| >2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=7.6e-08 Score=86.35 Aligned_cols=98 Identities=11% Similarity=0.026 Sum_probs=69.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHh------CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV------AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~------~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
++.+|||||||+|..++.+|+. +.+|+++|+++.+++.++ +. ..++++...|+.+... .
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~~-----~~~v~~~~gD~~~~~~-l---- 145 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----SD-----MENITLHQGDCSDLTT-F---- 145 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----GG-----CTTEEEEECCSSCSGG-G----
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----cc-----CCceEEEECcchhHHH-H----
Confidence 4679999999999999999986 689999999999988776 11 2568888887665300 0
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHH-hccCCCCeEEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKR-LMPLGSKKVLYL 251 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~-lL~~~~~~~i~v 251 (330)
......+||+|+.... + .....++..+.+ +|++| +.+++
T Consensus 146 --------------~~~~~~~fD~I~~d~~-~--~~~~~~l~~~~r~~LkpG--G~lv~ 185 (236)
T 2bm8_A 146 --------------EHLREMAHPLIFIDNA-H--ANTFNIMKWAVDHLLEEG--DYFII 185 (236)
T ss_dssp --------------GGGSSSCSSEEEEESS-C--SSHHHHHHHHHHHTCCTT--CEEEE
T ss_pred --------------HhhccCCCCEEEECCc-h--HhHHHHHHHHHHhhCCCC--CEEEE
Confidence 0001236999886443 2 366778888886 99876 34444
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=6.7e-08 Score=90.06 Aligned_cols=109 Identities=11% Similarity=0.048 Sum_probs=74.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHH-ccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQL-NSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~-N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
-++++|||||||+|..+..+++. ..+|+++|+++.+++.+++|+.. +... . ..++.+...|..+....
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~~------- 164 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSL-A-DPRATVRVGDGLAFVRQ------- 164 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-G-CTTEEEEESCHHHHHHS-------
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhccc-C-CCcEEEEECcHHHHHHh-------
Confidence 35689999999999999999987 46999999999999999998743 2111 1 35678877775432100
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCccc----HHHHHHHHHHhccCCCCeEEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDL----TDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~----~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...++||+|++.-..+.... ...+++.+.++|+++ +++++.
T Consensus 165 --------------~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg--G~lv~~ 209 (304)
T 3bwc_A 165 --------------TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD--GICCNQ 209 (304)
T ss_dssp --------------SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEE--EEEEEE
T ss_pred --------------ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC--cEEEEe
Confidence 01357999998432222111 168899999999775 455554
|
| >2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.59 E-value=2.4e-07 Score=80.88 Aligned_cols=85 Identities=13% Similarity=0.099 Sum_probs=62.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++.+|||+|||+|..+..+ +.+|+++|+++. ++.+...|..+...
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l---~~~v~~~D~s~~--------------------~~~~~~~d~~~~~~----------- 111 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI---RNPVHCFDLASL--------------------DPRVTVCDMAQVPL----------- 111 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC---CSCEEEEESSCS--------------------STTEEESCTTSCSC-----------
T ss_pred CCCCeEEEECCcCCHHHHHh---hccEEEEeCCCC--------------------CceEEEeccccCCC-----------
Confidence 45689999999999988766 479999999965 12334444443210
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
....||+|+++.+++. .....+++.+.++|+++ +.+++.
T Consensus 112 ------------~~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L~~g--G~l~i~ 150 (215)
T 2zfu_A 112 ------------EDESVDVAVFCLSLMG-TNIRDFLEEANRVLKPG--GLLKVA 150 (215)
T ss_dssp ------------CTTCEEEEEEESCCCS-SCHHHHHHHHHHHEEEE--EEEEEE
T ss_pred ------------CCCCEeEEEEehhccc-cCHHHHHHHHHHhCCCC--eEEEEE
Confidence 1247999999999974 77889999999999875 455554
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=7.2e-08 Score=89.55 Aligned_cols=105 Identities=12% Similarity=0.072 Sum_probs=73.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHH--ccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQL--NSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~--N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
++++|||||||+|..++.+++. ..+|+++|+++.+++.+++|+.. +.. . ..++++...|..+..+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~--~-~~~v~~~~~D~~~~l~-------- 158 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF--D-DPRAEIVIANGAEYVR-------- 158 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG--G-CTTEEEEESCHHHHGG--------
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc--C-CCceEEEECcHHHHHh--------
Confidence 4589999999999999999987 47999999999999999999854 221 0 2567777766432100
Q ss_pred CccccccccCccchhccCCeeEEEEeccccC-cc-----cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYS-DD-----LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~-~~-----~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...++||+|++ |.... .. ....+++.+.++|+++ +++++.
T Consensus 159 --------------~~~~~fD~Ii~-d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg--G~lv~~ 204 (296)
T 1inl_A 159 --------------KFKNEFDVIII-DSTDPTAGQGGHLFTEEFYQACYDALKED--GVFSAE 204 (296)
T ss_dssp --------------GCSSCEEEEEE-EC----------CCSHHHHHHHHHHEEEE--EEEEEE
T ss_pred --------------hCCCCceEEEE-cCCCcccCchhhhhHHHHHHHHHHhcCCC--cEEEEE
Confidence 01257999996 44321 11 3378899999999775 555553
|
| >2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.59 E-value=4.5e-07 Score=89.00 Aligned_cols=100 Identities=15% Similarity=0.070 Sum_probs=73.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--C-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--A-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..|.+|||+|||+|..++.++.. + .+|+++|+++.+++.++.|+..++. .++.+...|..+..+.
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-----~~v~~~~~D~~~~~~~------- 325 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-----KIVKPLVKDARKAPEI------- 325 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-----CSEEEECSCTTCCSSS-------
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-----CcEEEEEcChhhcchh-------
Confidence 46789999999999999988886 3 6999999999999999999998873 4677777776543110
Q ss_pred CccccccccCccchhccCCeeEEEE------eccccCccc----------------HHHHHHHHHHhccCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLA------ADVIYSDDL----------------TDALFHTLKRLMPLG 244 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIla------aDviY~~~~----------------~~~l~~tl~~lL~~~ 244 (330)
. ....||+|++ ..++..... ...+++.+.++|++|
T Consensus 326 -------------~-~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 382 (450)
T 2yxl_A 326 -------------I-GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG 382 (450)
T ss_dssp -------------S-CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE
T ss_pred -------------h-ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 0 1247999995 223332221 156788888888775
|
| >3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=7.2e-08 Score=93.13 Aligned_cols=104 Identities=11% Similarity=0.040 Sum_probs=76.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--C-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCe-eEEEEecCCCCCCCCccCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--A-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGS-VHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~-v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.|.+|||++||+|..|+.+|+. | .+|++.|+++.+++.+++|+++|+. ..+ +.+...|-.+...
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl----~~~~v~v~~~Da~~~l~-------- 119 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI----PEDRYEIHGMEANFFLR-------- 119 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC----CGGGEEEECSCHHHHHH--------
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC----CCceEEEEeCCHHHHHH--------
Confidence 4689999999999999999985 3 6899999999999999999999984 233 7776655322100
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
+ .....||+|+. |. |. ....+++.+.++++++ +.++++.+
T Consensus 120 --------~-----~~~~~fD~V~l-DP-~g--~~~~~l~~a~~~Lk~g--Gll~~t~t 159 (392)
T 3axs_A 120 --------K-----EWGFGFDYVDL-DP-FG--TPVPFIESVALSMKRG--GILSLTAT 159 (392)
T ss_dssp --------S-----CCSSCEEEEEE-CC-SS--CCHHHHHHHHHHEEEE--EEEEEEEC
T ss_pred --------H-----hhCCCCcEEEE-CC-Cc--CHHHHHHHHHHHhCCC--CEEEEEec
Confidence 0 01247999985 55 42 3356888888888664 57777663
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.2e-07 Score=87.30 Aligned_cols=107 Identities=9% Similarity=0.092 Sum_probs=73.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCC-----CCCCCeeEEEEecCCCCCCCCccCC
Q 020158 120 NGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGV-----FSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~-----~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
++++|||||||+|..++.+++.+ .+|+++|+++.+++.+++|+..|... .....++++...|..+.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~-------- 146 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEF-------- 146 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHH--------
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHH--------
Confidence 56899999999999999998874 69999999999999999998221110 00035677766553211
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCc----c-cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSD----D-LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~----~-~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+...++||+|++ |..+.. . ....+++.+.++|+++ +++++.
T Consensus 147 ---------------l~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pg--G~lv~~ 192 (281)
T 1mjf_A 147 ---------------IKNNRGFDVIIA-DSTDPVGPAKVLFSEEFYRYVYDALNNP--GIYVTQ 192 (281)
T ss_dssp ---------------HHHCCCEEEEEE-ECCCCC-----TTSHHHHHHHHHHEEEE--EEEEEE
T ss_pred ---------------hcccCCeeEEEE-CCCCCCCcchhhhHHHHHHHHHHhcCCC--cEEEEE
Confidence 111357999996 554321 1 1477899999999775 455543
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.56 E-value=4.7e-08 Score=91.78 Aligned_cols=103 Identities=13% Similarity=0.065 Sum_probs=73.4
Q ss_pred CCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
..+||+||||+|.++..+++. +.+|+++|+++.+++.+++++..+. ..++++...|..+....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-----~~rv~v~~~Da~~~l~~---------- 154 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-----APRVKIRVDDARMVAES---------- 154 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-----TTTEEEEESCHHHHHHT----------
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-----CCceEEEECcHHHHHhh----------
Confidence 349999999999999999884 5799999999999999999986543 35677777663321000
Q ss_pred ccccccCccchhccCCeeEEEEeccccC---cc--cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYS---DD--LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~---~~--~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...++||+|+. |+... .. ....+++.+.++|+++ +++++-
T Consensus 155 -----------~~~~~fDvIi~-D~~~~~~~~~~L~t~efl~~~~r~Lkpg--Gvlv~~ 199 (317)
T 3gjy_A 155 -----------FTPASRDVIIR-DVFAGAITPQNFTTVEFFEHCHRGLAPG--GLYVAN 199 (317)
T ss_dssp -----------CCTTCEEEEEE-CCSTTSCCCGGGSBHHHHHHHHHHEEEE--EEEEEE
T ss_pred -----------ccCCCCCEEEE-CCCCccccchhhhHHHHHHHHHHhcCCC--cEEEEE
Confidence 01257999996 33221 11 2378999999999875 444443
|
| >3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=3.9e-07 Score=84.72 Aligned_cols=71 Identities=14% Similarity=0.149 Sum_probs=58.1
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
+++.|.... ....+.+|||+|||+|..+..+++.+.+|++.|+++.+++.+++|+.. ..++.+...|+.+
T Consensus 38 i~~~Iv~~l---~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~-------~~~v~vi~gD~l~ 107 (295)
T 3gru_A 38 FVNKAVESA---NLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL-------YNNIEIIWGDALK 107 (295)
T ss_dssp HHHHHHHHT---TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHH-------CSSEEEEESCTTT
T ss_pred HHHHHHHhc---CCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhcc-------CCCeEEEECchhh
Confidence 344555543 445688999999999999999999999999999999999999999872 3578888888766
Q ss_pred C
Q 020158 185 P 185 (330)
Q Consensus 185 ~ 185 (330)
.
T Consensus 108 ~ 108 (295)
T 3gru_A 108 V 108 (295)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=6.3e-08 Score=89.36 Aligned_cols=108 Identities=10% Similarity=0.031 Sum_probs=74.6
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
++++|||||||+|..+..+++. ..+|+++|+++.+++.+++|+..++.... ..++++...|..+..
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~-~~~v~~~~~D~~~~l----------- 145 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE-DKRVNVFIEDASKFL----------- 145 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG-STTEEEEESCHHHHH-----------
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccC-CCcEEEEECChHHHH-----------
Confidence 5689999999999999999887 47999999999999999998865321111 256777766643210
Q ss_pred cccccccCccchhccCCeeEEEE--eccccCccc--HHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLA--ADVIYSDDL--TDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIla--aDviY~~~~--~~~l~~tl~~lL~~~~~~~i~va 252 (330)
....++||+|++ .|.+..... ...+++.+.++|+++ +++++.
T Consensus 146 -----------~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg--G~lv~~ 191 (283)
T 2i7c_A 146 -----------ENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN--GYCVAQ 191 (283)
T ss_dssp -----------HHCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE--EEEEEE
T ss_pred -----------HhCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC--cEEEEE
Confidence 001357999997 222211111 278999999999775 555553
|
| >1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1.6e-07 Score=87.98 Aligned_cols=107 Identities=12% Similarity=0.113 Sum_probs=75.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHH-ccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQL-NSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~-N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
++++|||||||+|..+..+++. +.+|+++|+++.+++.+++|+.. |..... ..++++...|..+..
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~-~~~v~~~~~D~~~~l---------- 145 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD-DPRAVLVIDDARAYL---------- 145 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG-CTTEEEEESCHHHHH----------
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccccc-CCceEEEEchHHHHH----------
Confidence 5689999999999999999887 57999999999999999999864 321010 256777766643210
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCc---cc-----HHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSD---DL-----TDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~---~~-----~~~l~~tl~~lL~~~~~~~i~va 252 (330)
....++||+|++. ..... .. ...+++.+.++|+++ +++++.
T Consensus 146 ------------~~~~~~fD~Ii~d-~~~~~~~~~~~~~l~~~~~l~~~~~~Lkpg--G~lv~~ 194 (314)
T 1uir_A 146 ------------ERTEERYDVVIID-LTDPVGEDNPARLLYTVEFYRLVKAHLNPG--GVMGMQ 194 (314)
T ss_dssp ------------HHCCCCEEEEEEE-CCCCBSTTCGGGGGSSHHHHHHHHHTEEEE--EEEEEE
T ss_pred ------------HhcCCCccEEEEC-CCCcccccCcchhccHHHHHHHHHHhcCCC--cEEEEE
Confidence 0013579999984 43322 11 578999999999875 455443
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=9e-08 Score=89.32 Aligned_cols=106 Identities=11% Similarity=0.046 Sum_probs=72.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHH--ccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQL--NSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~--N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
.++++|||||||+|..++.+++.. .+|+++|+++.+++.+++|+.. ++.. ..++++...|..+..+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~---~~rv~v~~~Da~~~l~------- 163 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS---SSKLTLHVGDGFEFMK------- 163 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG---CTTEEEEESCHHHHHH-------
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccC---CCcEEEEECcHHHHHh-------
Confidence 356899999999999999999873 7999999999999999999865 2210 2567777655322100
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcc-----cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDD-----LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~-----~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...++||+|++ |...... ....+++.+.++|+++ +++++.
T Consensus 164 ---------------~~~~~fD~Ii~-d~~~~~~~~~~l~~~~~l~~~~~~Lkpg--G~lv~~ 208 (304)
T 2o07_A 164 ---------------QNQDAFDVIIT-DSSDPMGPAESLFKESYYQLMKTALKED--GVLCCQ 208 (304)
T ss_dssp ---------------TCSSCEEEEEE-ECC-----------CHHHHHHHHHEEEE--EEEEEE
T ss_pred ---------------hCCCCceEEEE-CCCCCCCcchhhhHHHHHHHHHhccCCC--eEEEEe
Confidence 01357999997 4433211 2356899999999775 455553
|
| >3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.9e-07 Score=88.33 Aligned_cols=94 Identities=14% Similarity=0.150 Sum_probs=70.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
-.+.+|||+|||+|..++.+++. +.++++.|++ .++. +.++...+. ..++.+...|..+.
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~----~~~v~~~~~d~~~~----------- 244 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDV----AGRWKVVEGDFLRE----------- 244 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGG----TTSEEEEECCTTTC-----------
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCC----CCCeEEEecCCCCC-----------
Confidence 35789999999999999988886 4578999994 5544 322222121 35788988887632
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccH--HHHHHHHHHhccCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLT--DALFHTLKRLMPLGS 245 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~--~~l~~tl~~lL~~~~ 245 (330)
+ . .||+|++..++++.... ..+++.+.++|++++
T Consensus 245 ------------~--p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG 280 (348)
T 3lst_A 245 ------------V--P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHG 280 (348)
T ss_dssp ------------C--C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTC
T ss_pred ------------C--C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCC
Confidence 1 1 79999999999876655 689999999998864
|
| >3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=98.53 E-value=2.4e-07 Score=80.49 Aligned_cols=113 Identities=12% Similarity=0.093 Sum_probs=71.8
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
+++.-|.+.+.... ..-+|.+|||||||+|..++.+++.+.+|++.|+++.. . ..++.+..
T Consensus 8 Ra~~KL~ei~~~~~---~~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~-----------~-----~~~v~~~~ 68 (191)
T 3dou_A 8 RAAFKLEFLLDRYR---VVRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME-----------E-----IAGVRFIR 68 (191)
T ss_dssp HHHHHHHHHHHHHC---CSCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC-----------C-----CTTCEEEE
T ss_pred cHHHHHHHHHHHcC---CCCCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc-----------c-----CCCeEEEE
Confidence 46677777665542 33468999999999999999999998899999998631 1 24677888
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchh--ccCCeeEEEEecccc---C--------cccHHHHHHHHHHhccCCC
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELK--EVQRASVLLAADVIY---S--------DDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~--~~~~~DlIlaaDviY---~--------~~~~~~l~~tl~~lL~~~~ 245 (330)
.|..+..... .. ...+. ...+||+|++.-... . ......+++...++|++|+
T Consensus 69 ~D~~~~~~~~-----------~~---~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG 133 (191)
T 3dou_A 69 CDIFKETIFD-----------DI---DRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGG 133 (191)
T ss_dssp CCTTSSSHHH-----------HH---HHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred ccccCHHHHH-----------HH---HHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCC
Confidence 8766531000 00 00000 013899999732111 0 1234567788889998763
|
| >3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.52 E-value=3.8e-07 Score=87.86 Aligned_cols=109 Identities=11% Similarity=0.056 Sum_probs=81.1
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC----------------------------------------C
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA----------------------------------------W 143 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~----------------------------------------~ 143 (330)
.||..|+... ..-.+.+|||+|||+|...+.+|..+ .
T Consensus 182 ~lAa~ll~~~---~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 182 TLAAGLIYLT---PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp HHHHHHHHTS---CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHHhh---CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 4666666552 34467899999999999999998874 3
Q ss_pred eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEecc
Q 020158 144 TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADV 223 (330)
Q Consensus 144 ~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDv 223 (330)
+|+++|+++.+++.++.|+..|+. ...+.+...|+.+.. ....||+|++.-.
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~~~gl----~~~i~~~~~D~~~l~------------------------~~~~~D~Iv~NPP 310 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIAGV----DEYIEFNVGDATQFK------------------------SEDEFGFIITNPP 310 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEECCGGGCC------------------------CSCBSCEEEECCC
T ss_pred eEEEEECCHHHHHHHHHHHHHcCC----CCceEEEECChhhcC------------------------cCCCCcEEEECCC
Confidence 699999999999999999999874 357888888876542 1247999998765
Q ss_pred ccC----cccHHHHHHHHHHhccC
Q 020158 224 IYS----DDLTDALFHTLKRLMPL 243 (330)
Q Consensus 224 iY~----~~~~~~l~~tl~~lL~~ 243 (330)
... ......+.+.+.+.+++
T Consensus 311 yg~rl~~~~~l~~ly~~lg~~lk~ 334 (385)
T 3ldu_A 311 YGERLEDKDSVKQLYKELGYAFRK 334 (385)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred CcCccCCHHHHHHHHHHHHHHHhh
Confidence 321 23455677777777765
|
| >2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.2e-07 Score=89.08 Aligned_cols=107 Identities=9% Similarity=0.025 Sum_probs=74.7
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
++++|||||||+|..++.+++. +.+|+++|+++.+++.+++|+........ ..++++...|+.+..+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~-~~~v~~~~~D~~~~l~---------- 184 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE-DKRVNVFIEDASKFLE---------- 184 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG-STTEEEEESCHHHHHH----------
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC-CCcEEEEEccHHHHHh----------
Confidence 5689999999999999999987 47999999999999999999865210010 2467777776543200
Q ss_pred cccccccCccchhccCCeeEEEEecccc--C--ccc-HHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIY--S--DDL-TDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY--~--~~~-~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...++||+|++. ... . ... ...+++.+.++|+++ +++++.
T Consensus 185 ------------~~~~~fDvIi~d-~~~p~~~~~~l~~~~~l~~~~~~Lkpg--G~lv~~ 229 (321)
T 2pt6_A 185 ------------NVTNTYDVIIVD-SSDPIGPAETLFNQNFYEKIYNALKPN--GYCVAQ 229 (321)
T ss_dssp ------------HCCSCEEEEEEE-CCCSSSGGGGGSSHHHHHHHHHHEEEE--EEEEEE
T ss_pred ------------hcCCCceEEEEC-CcCCCCcchhhhHHHHHHHHHHhcCCC--cEEEEE
Confidence 013579999973 321 1 111 278999999999775 555553
|
| >1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A | Back alignment and structure |
|---|
Probab=98.51 E-value=9.7e-07 Score=79.51 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=57.1
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
..+++.+.... ....+.+|||+|||+|..+..++..+.+|+++|+++.+++.+++|+.. ..++.+...|.
T Consensus 16 ~~~~~~i~~~~---~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-------~~~v~~~~~D~ 85 (244)
T 1qam_A 16 KHNIDKIMTNI---RLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD-------HDNFQVLNKDI 85 (244)
T ss_dssp HHHHHHHHTTC---CCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT-------CCSEEEECCCG
T ss_pred HHHHHHHHHhC---CCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc-------CCCeEEEEChH
Confidence 34455665543 345678999999999999999999999999999999999999998853 24677777776
Q ss_pred CC
Q 020158 183 MN 184 (330)
Q Consensus 183 ~~ 184 (330)
.+
T Consensus 86 ~~ 87 (244)
T 1qam_A 86 LQ 87 (244)
T ss_dssp GG
T ss_pred Hh
Confidence 54
|
| >2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.3e-07 Score=86.24 Aligned_cols=61 Identities=13% Similarity=0.061 Sum_probs=52.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCch-------HHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGN-------YILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~-------~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
++.+|||+|||+|..++.+|..+.+|+++|+++ ++++.++.|+..|+. ..++++...|..+
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~----~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDT----AARINLHFGNAAE 150 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH----HTTEEEEESCHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCC----ccCeEEEECCHHH
Confidence 567999999999999999999999999999999 999999999998873 2347887776543
|
| >2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.50 E-value=7.8e-07 Score=88.07 Aligned_cols=60 Identities=8% Similarity=0.029 Sum_probs=50.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
.|.+|||+|||+|..++.+|.. +.+|++.|+++.+++.+++|+..++. .++.+...|...
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~-----~nv~~~~~D~~~ 179 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI-----SNVALTHFDGRV 179 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC-----CSEEEECCCSTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CcEEEEeCCHHH
Confidence 6789999999999999988886 36999999999999999999999873 457777666443
|
| >4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=1e-06 Score=83.57 Aligned_cols=95 Identities=11% Similarity=0.127 Sum_probs=75.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++|||+|||+|..++.+++. ..++++.|. |.+++.+++++.... ..++++...|+.++.
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-----~~rv~~~~gD~~~~~----------- 241 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-----EEQIDFQEGDFFKDP----------- 241 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-------CCSEEEEESCTTTSC-----------
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-----cCceeeecCccccCC-----------
Confidence 4579999999999999999887 467888888 689999998875443 478999999987541
Q ss_pred cccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGS 245 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~ 245 (330)
...+|+|+...|+++-.. ...+++.+.+.|++++
T Consensus 242 --------------~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg 277 (353)
T 4a6d_A 242 --------------LPEADLYILARVLHDWADGKCSHLLERIYHTCKPGG 277 (353)
T ss_dssp --------------CCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTC
T ss_pred --------------CCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCC
Confidence 135799999999987543 4678999999998764
|
| >3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str} | Back alignment and structure |
|---|
Probab=98.50 E-value=7.4e-07 Score=86.08 Aligned_cols=109 Identities=11% Similarity=0.044 Sum_probs=78.6
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC----------------------------------------
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW---------------------------------------- 143 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~---------------------------------------- 143 (330)
.||..|+... ..-.+..|||++||+|...+.+|..+.
T Consensus 188 ~lAa~ll~l~---~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 264 (393)
T 3k0b_A 188 TMAAALVLLT---SWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL 264 (393)
T ss_dssp HHHHHHHHHS---CCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHHh---CCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc
Confidence 4555555442 334678999999999999999888753
Q ss_pred eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEecc
Q 020158 144 TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADV 223 (330)
Q Consensus 144 ~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDv 223 (330)
+|+++|+++.+++.++.|+..++. ...+.+...|+.+.. ....||+|++.-.
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~gl----~~~I~~~~~D~~~~~------------------------~~~~fD~Iv~NPP 316 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAGL----GDLITFRQLQVADFQ------------------------TEDEYGVVVANPP 316 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTC----TTCSEEEECCGGGCC------------------------CCCCSCEEEECCC
T ss_pred eEEEEECCHHHHHHHHHHHHHcCC----CCceEEEECChHhCC------------------------CCCCCCEEEECCC
Confidence 499999999999999999999875 356888888776542 1247999997755
Q ss_pred ccC----cccHHHHHHHHHHhccC
Q 020158 224 IYS----DDLTDALFHTLKRLMPL 243 (330)
Q Consensus 224 iY~----~~~~~~l~~tl~~lL~~ 243 (330)
... ......+.+.+.+.+++
T Consensus 317 Yg~rl~~~~~l~~ly~~lg~~lk~ 340 (393)
T 3k0b_A 317 YGERLEDEEAVRQLYREMGIVYKR 340 (393)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred CccccCCchhHHHHHHHHHHHHhc
Confidence 322 13445566666666655
|
| >3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=2.7e-07 Score=90.92 Aligned_cols=68 Identities=13% Similarity=0.069 Sum_probs=54.1
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
+|.+++..+ ....|.+|||+|||+|..++.+|.. ..+|++.|+++.+++.+++|+..++. . +.+
T Consensus 89 ss~l~a~~L-------~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~-----~-v~~ 155 (464)
T 3m6w_A 89 SAQAVGVLL-------DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA-----P-LAV 155 (464)
T ss_dssp TTHHHHHHH-------CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC-----C-CEE
T ss_pred HHHHHHHhc-------CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----e-EEE
Confidence 455555554 2346889999999999999998876 25899999999999999999999873 3 666
Q ss_pred EEec
Q 020158 178 RDLN 181 (330)
Q Consensus 178 ~~ld 181 (330)
...|
T Consensus 156 ~~~D 159 (464)
T 3m6w_A 156 TQAP 159 (464)
T ss_dssp ECSC
T ss_pred EECC
Confidence 6555
|
| >2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.2e-06 Score=82.83 Aligned_cols=96 Identities=11% Similarity=0.065 Sum_probs=71.7
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC-------CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccC
Q 020158 120 NGIISLELGAGTGLAGILLSRVA-------WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSL 192 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~-------~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~ 192 (330)
.+.+|||+|||+|...+.+++.. .+|++.|+++.+++.++.|+..++. ++.+...|+....
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~------~~~i~~~D~l~~~------ 197 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ------KMTLLHQDGLANL------ 197 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC------CCEEEESCTTSCC------
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC------CceEEECCCCCcc------
Confidence 56799999999999998888763 6899999999999999999998762 4566666654421
Q ss_pred CCCCccccccccCccchhccCCeeEEEEeccc-cCcc-----------------cHHHHHHHHHHhccCCC
Q 020158 193 GNSSASQERYSWNSSELKEVQRASVLLAADVI-YSDD-----------------LTDALFHTLKRLMPLGS 245 (330)
Q Consensus 193 ~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDvi-Y~~~-----------------~~~~l~~tl~~lL~~~~ 245 (330)
...+||+|++.-.+ |... ....++..+.++|++++
T Consensus 198 ------------------~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG 250 (344)
T 2f8l_A 198 ------------------LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGG 250 (344)
T ss_dssp ------------------CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEE
T ss_pred ------------------ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCC
Confidence 12479999998774 2111 11257888888887653
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.6e-07 Score=88.02 Aligned_cols=107 Identities=14% Similarity=0.093 Sum_probs=71.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
++++|||||||+|..++.+++. ..+|+++|+++.+++.+++|+..+..... ..++++...|..+..
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~-~~rv~~~~~D~~~~l----------- 175 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFS-HPKLDLFCGDGFEFL----------- 175 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGG-CTTEEEECSCHHHHH-----------
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccC-CCCEEEEEChHHHHH-----------
Confidence 4589999999999999999887 47999999999999999999865310000 256777666543210
Q ss_pred cccccccCccchhccCCeeEEEEeccccC----ccc-HHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYS----DDL-TDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~----~~~-~~~l~~tl~~lL~~~~~~~i~va 252 (330)
....++||+|++ |.... ..+ ...+++.+.++|+++ +++++.
T Consensus 176 -----------~~~~~~fD~Ii~-d~~~~~~~~~~l~t~~~l~~~~~~Lkpg--G~lv~~ 221 (314)
T 2b2c_A 176 -----------KNHKNEFDVIIT-DSSDPVGPAESLFGQSYYELLRDALKED--GILSSQ 221 (314)
T ss_dssp -----------HHCTTCEEEEEE-CCC-------------HHHHHHHHEEEE--EEEEEE
T ss_pred -----------HhcCCCceEEEE-cCCCCCCcchhhhHHHHHHHHHhhcCCC--eEEEEE
Confidence 001357999996 44321 111 278899999999765 555553
|
| >3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=98.47 E-value=4.8e-07 Score=82.37 Aligned_cols=70 Identities=11% Similarity=0.074 Sum_probs=57.0
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++.+.... ....+.+|||+|||+|..+..++..+.+|+++|+++++++.+++|+.. ..++++...|..+.
T Consensus 18 ~~~iv~~~---~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~-------~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 18 LQKIVSAI---HPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ-------QKNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHH---CCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT-------CTTEEEEESCTTTC
T ss_pred HHHHHHhc---CCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh-------CCCcEEEEcchHhC
Confidence 44454443 345688999999999999999999999999999999999999999864 25688888887664
|
| >2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=98.46 E-value=1.5e-06 Score=74.88 Aligned_cols=128 Identities=13% Similarity=0.042 Sum_probs=72.5
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh----CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCee
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV----AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSV 175 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~----~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v 175 (330)
+++.-|.+.+.... ..-++.+|||||||+|..++.+++. +.+|+++|+++.. . ..++
T Consensus 5 r~~~kl~~~~~~~~---~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~-----~~~v 65 (201)
T 2plw_A 5 RAAYKLIELDNKYL---FLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P-----IPNV 65 (201)
T ss_dssp TTHHHHHHHHHHHC---CCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C-----CTTC
T ss_pred HHHHHHHHHHHHcC---CCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C-----CCCc
Confidence 45666777554431 2345789999999999999999876 3689999999721 0 2456
Q ss_pred EEEEecCCCCCCCCccCCCCCccccccccCc--cch---hccCCeeEEEEeccccCcc-----c------HHHHHHHHHH
Q 020158 176 HVRDLNWMNPWPPIFSLGNSSASQERYSWNS--SEL---KEVQRASVLLAADVIYSDD-----L------TDALFHTLKR 239 (330)
Q Consensus 176 ~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~--~~~---~~~~~~DlIlaaDviY~~~-----~------~~~l~~tl~~ 239 (330)
.+...|+.+...... .+... .....+.. ..+ -....||+|++.-.+.... . ...+++.+.+
T Consensus 66 ~~~~~d~~~~~~~~~--~~~~~-i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~ 142 (201)
T 2plw_A 66 YFIQGEIGKDNMNNI--KNINY-IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQ 142 (201)
T ss_dssp EEEECCTTTTSSCCC--------------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEccccchhhhhh--ccccc-cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHH
Confidence 777777765420000 00000 00000000 000 0235899999865544321 1 1237788899
Q ss_pred hccCCCCeEEEE
Q 020158 240 LMPLGSKKVLYL 251 (330)
Q Consensus 240 lL~~~~~~~i~v 251 (330)
+|+++ +.+++
T Consensus 143 ~Lkpg--G~lv~ 152 (201)
T 2plw_A 143 YINIG--GTYIV 152 (201)
T ss_dssp HEEEE--EEEEE
T ss_pred HccCC--CEEEE
Confidence 99876 44444
|
| >3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.7e-07 Score=90.82 Aligned_cols=69 Identities=12% Similarity=0.022 Sum_probs=55.4
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
+|.+++..+ ..-.|.+|||+|||+|..++.+|.. +.+|++.|+++.+++.+++|+..++. .++.+
T Consensus 93 ss~l~~~~L-------~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~-----~nv~v 160 (456)
T 3m4x_A 93 SAMIVGTAA-------AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV-----SNAIV 160 (456)
T ss_dssp TTHHHHHHH-------CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC-----SSEEE
T ss_pred HHHHHHHHc-------CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CceEE
Confidence 456666655 2346889999999999999988876 36899999999999999999999874 45666
Q ss_pred EEec
Q 020158 178 RDLN 181 (330)
Q Consensus 178 ~~ld 181 (330)
...|
T Consensus 161 ~~~D 164 (456)
T 3m4x_A 161 TNHA 164 (456)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 6554
|
| >1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=4.9e-07 Score=85.51 Aligned_cols=86 Identities=12% Similarity=0.163 Sum_probs=69.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||+|||+|..+..+++. +.+|+++|+ +.+++.+++ ..++.+...|..+..
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~----------- 244 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG-----------SNNLTYVGGDMFTSI----------- 244 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------BTTEEEEECCTTTCC-----------
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc-----------CCCcEEEeccccCCC-----------
Confidence 4579999999999999998876 568999999 888876553 123788888765421
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHH--HHHHHHHHhccC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTD--ALFHTLKRLMPL 243 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~--~l~~tl~~lL~~ 243 (330)
..||+|++..++++-...+ .+++.+.++|++
T Consensus 245 ---------------p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p 277 (352)
T 1fp2_A 245 ---------------PNADAVLLKYILHNWTDKDCLRILKKCKEAVTN 277 (352)
T ss_dssp ---------------CCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSG
T ss_pred ---------------CCccEEEeehhhccCCHHHHHHHHHHHHHhCCC
Confidence 1399999999999876666 999999999987
|
| >3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.3e-06 Score=84.14 Aligned_cols=109 Identities=13% Similarity=0.107 Sum_probs=80.3
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCC----------------------------------------
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAW---------------------------------------- 143 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~---------------------------------------- 143 (330)
.||.-|+... ..-.+..|||.+||+|...|.+|..+.
T Consensus 181 ~LAaall~l~---~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 257 (384)
T 3ldg_A 181 NMAAAIILLS---NWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL 257 (384)
T ss_dssp HHHHHHHHHT---TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHHh---CCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc
Confidence 5666665542 334678999999999999999887753
Q ss_pred eEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEecc
Q 020158 144 TVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADV 223 (330)
Q Consensus 144 ~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDv 223 (330)
+|+++|+++.+++.++.|+..++. ...+.+...|..+.. ....||+|++.-.
T Consensus 258 ~v~GvDid~~al~~Ar~Na~~~gl----~~~I~~~~~D~~~l~------------------------~~~~fD~Iv~NPP 309 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNAREVGL----EDVVKLKQMRLQDFK------------------------TNKINGVLISNPP 309 (384)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCGGGCC------------------------CCCCSCEEEECCC
T ss_pred eEEEEECCHHHHHHHHHHHHHcCC----CCceEEEECChHHCC------------------------ccCCcCEEEECCc
Confidence 499999999999999999999875 356888888766531 1237999997644
Q ss_pred ccC----cccHHHHHHHHHHhccC
Q 020158 224 IYS----DDLTDALFHTLKRLMPL 243 (330)
Q Consensus 224 iY~----~~~~~~l~~tl~~lL~~ 243 (330)
.-. ......|.+.+.+.++.
T Consensus 310 YG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 310 YGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp CTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred hhhccCCHHHHHHHHHHHHHHHhh
Confidence 321 23466677777777765
|
| >1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A | Back alignment and structure |
|---|
Probab=98.42 E-value=9.7e-07 Score=86.04 Aligned_cols=72 Identities=18% Similarity=0.071 Sum_probs=56.5
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
.++.+++..+ ...+|.+|||+|||+|..++.++... .+|++.|+++.+++.++.|+..++. ++.+
T Consensus 233 ~~s~~~~~~l-------~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~------~~~~ 299 (429)
T 1sqg_A 233 ASAQGCMTWL-------APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM------KATV 299 (429)
T ss_dssp HHHHTHHHHH-------CCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC------CCEE
T ss_pred HHHHHHHHHc-------CCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC------CeEE
Confidence 3455555554 23467899999999999999999875 6999999999999999999998863 3566
Q ss_pred EEecCCC
Q 020158 178 RDLNWMN 184 (330)
Q Consensus 178 ~~ldW~~ 184 (330)
...|..+
T Consensus 300 ~~~D~~~ 306 (429)
T 1sqg_A 300 KQGDGRY 306 (429)
T ss_dssp EECCTTC
T ss_pred EeCchhh
Confidence 6666554
|
| >3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=7.4e-07 Score=81.87 Aligned_cols=68 Identities=13% Similarity=0.066 Sum_probs=54.1
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++.|.... ..-.+ +|||+|||+|..+..++..+.+|++.|+++++++.+++|+. ..++++...|..+.
T Consensus 36 ~~~Iv~~~---~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~--------~~~v~vi~~D~l~~ 103 (271)
T 3fut_A 36 LRRIVEAA---RPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS--------GLPVRLVFQDALLY 103 (271)
T ss_dssp HHHHHHHH---CCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT--------TSSEEEEESCGGGS
T ss_pred HHHHHHhc---CCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC--------CCCEEEEECChhhC
Confidence 34444443 34457 99999999999999999999999999999999999998874 14678887776543
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.40 E-value=1.9e-06 Score=73.80 Aligned_cols=49 Identities=16% Similarity=0.063 Sum_probs=37.6
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-C----------CeEEEEeCch
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-A----------WTVFLTDHGN 152 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~----------~~V~~TD~~~ 152 (330)
++.-|.+..... ...-++.+|||||||+|..++.+++. + .+|+++|+++
T Consensus 6 ~~~kl~~l~~~~---~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~ 65 (196)
T 2nyu_A 6 SAFKLLEVNERH---QILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLH 65 (196)
T ss_dssp HHHHHHHHHHHH---CCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSC
T ss_pred HHHHHHHHHHhc---CCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechh
Confidence 455555555443 13346789999999999999999987 4 7899999997
|
| >1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=8.5e-07 Score=84.54 Aligned_cols=94 Identities=7% Similarity=0.043 Sum_probs=72.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
-++.+|||+|||+|..+..+++.. .++++.|+ +.+++.++. ..++.+...|..++.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~---------- 265 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP-----------LSGIEHVGGDMFASV---------- 265 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTCC----------
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh-----------cCCCEEEeCCcccCC----------
Confidence 356899999999999999998874 57888899 888875542 134788888776521
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHH--HHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTD--ALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~--~l~~tl~~lL~~~~~~~i~va 252 (330)
..||+|++..++++....+ .+++.+.++|+++ +.+++.
T Consensus 266 ----------------~~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pg--G~l~i~ 305 (372)
T 1fp1_D 266 ----------------PQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPN--GKVIIV 305 (372)
T ss_dssp ----------------CCEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred ----------------CCCCEEEEecccccCCHHHHHHHHHHHHHhcCCC--CEEEEE
Confidence 1389999999999877666 9999999999875 444443
|
| >3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=1.5e-06 Score=82.93 Aligned_cols=88 Identities=10% Similarity=0.094 Sum_probs=68.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||+|||+|..++.+++. +.++++.|+ +.+++.++. ..++++...|+.++.+
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~p---------- 260 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA-----------FSGVEHLGGDMFDGVP---------- 260 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTCCC----------
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh-----------cCCCEEEecCCCCCCC----------
Confidence 4689999999999999999886 468999999 788765442 2468888888765311
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGS 245 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~ 245 (330)
.. |+|++..++++-. ....+++.+.+.|++++
T Consensus 261 ---------------~~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG 294 (368)
T 3reo_A 261 ---------------KG-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHG 294 (368)
T ss_dssp ---------------CC-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTC
T ss_pred ---------------CC-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCC
Confidence 13 9999999998544 45578999999998864
|
| >2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.8e-07 Score=85.58 Aligned_cols=121 Identities=12% Similarity=-0.012 Sum_probs=73.7
Q ss_pred CeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCC-CCC
Q 020158 95 GLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFS-HQG 173 (330)
Q Consensus 95 G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~-~~~ 173 (330)
+..+=+++.-|.+.+... ...+|.+|||||||+|..+..+++. .+|+++|+++ |+..++.+ ..... ...
T Consensus 53 ~~~~sR~a~KL~~i~~~~----~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~a~~~----~~~~~~~~~ 122 (265)
T 2oxt_A 53 GLSVSRGTAKLAWMEERG----YVELTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVGGHEV----PRITESYGW 122 (265)
T ss_dssp CBCSSTHHHHHHHHHHHT----SCCCCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCSSCCC----CCCCCBTTG
T ss_pred CCccchHHHHHHHHHHcC----CCCCCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhhhhhh----hhhhhccCC
Confidence 445667788777766542 3446889999999999999999988 7899999997 43211111 00000 011
Q ss_pred eeEEE--EecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccH----H---HHHHHHHHhccCC
Q 020158 174 SVHVR--DLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLT----D---ALFHTLKRLMPLG 244 (330)
Q Consensus 174 ~v~v~--~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~----~---~l~~tl~~lL~~~ 244 (330)
++.+. ..|..+. ...+||+|++.-. +..... . .+++.+.++|+++
T Consensus 123 ~v~~~~~~~D~~~l-------------------------~~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpG 176 (265)
T 2oxt_A 123 NIVKFKSRVDIHTL-------------------------PVERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKN 176 (265)
T ss_dssp GGEEEECSCCTTTS-------------------------CCCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CeEEEecccCHhHC-------------------------CCCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccC
Confidence 45555 4443321 1247999998544 222111 1 2678888999887
Q ss_pred CCeEEEE
Q 020158 245 SKKVLYL 251 (330)
Q Consensus 245 ~~~~i~v 251 (330)
+...+++
T Consensus 177 G~~~fv~ 183 (265)
T 2oxt_A 177 PSADFVV 183 (265)
T ss_dssp TTCEEEE
T ss_pred CCeEEEE
Confidence 6324444
|
| >2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=2e-07 Score=85.91 Aligned_cols=53 Identities=17% Similarity=-0.029 Sum_probs=40.2
Q ss_pred CeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCch
Q 020158 95 GLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGN 152 (330)
Q Consensus 95 G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~ 152 (330)
|..+-+++.-|.+.+... ...+|.+|||||||+|..+..+++. .+|+++|+++
T Consensus 61 ~~~~sR~a~KL~~i~~~~----~~~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~ 113 (276)
T 2wa2_A 61 GHAVSRGTAKLAWIDERG----GVELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT 113 (276)
T ss_dssp ----CHHHHHHHHHHHTT----SCCCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC
T ss_pred CCcCchHHHHHHHHHHcC----CCCCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch
Confidence 445667777777665432 3346889999999999999999988 7899999997
|
| >3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=2.5e-06 Score=81.22 Aligned_cols=89 Identities=10% Similarity=0.055 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
-.+.+|||+|||+|..++.+++. ..++++.|+ +.+++.++. ..++++...|+.++.+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~D~~~~~p--------- 258 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ-----------FPGVTHVGGDMFKEVP--------- 258 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------CTTEEEEECCTTTCCC---------
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh-----------cCCeEEEeCCcCCCCC---------
Confidence 34689999999999999988876 468999999 788765432 2568888888765311
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~ 245 (330)
.. |+|++..++++- .....+++.+.+.|++++
T Consensus 259 ----------------~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG 292 (364)
T 3p9c_A 259 ----------------SG-DTILMKWILHDWSDQHCATLLKNCYDALPAHG 292 (364)
T ss_dssp ----------------CC-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTC
T ss_pred ----------------CC-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCC
Confidence 13 999999999854 456689999999998864
|
| >2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A | Back alignment and structure |
|---|
Probab=98.27 E-value=3.4e-07 Score=83.63 Aligned_cols=97 Identities=9% Similarity=-0.067 Sum_probs=68.1
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHH--ccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQL--NSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~--N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
++++|||||||+|..+..+++.+.+|+++|+++.+++.+++++.. +... ..++++...|-.+.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~---~~rv~~~~~D~~~~------------ 136 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKN---NKNFTHAKQLLDLD------------ 136 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHT---CTTEEEESSGGGSC------------
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccC---CCeEEEEechHHHH------------
Confidence 568999999999998887776678999999999999999887632 1100 24566664442221
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+ ++||+|++. . . ....+++.+.++|+++ +++++.
T Consensus 137 -----------~---~~fD~Ii~d-~-~---dp~~~~~~~~~~L~pg--G~lv~~ 170 (262)
T 2cmg_A 137 -----------I---KKYDLIFCL-Q-E---PDIHRIDGLKRMLKED--GVFISV 170 (262)
T ss_dssp -----------C---CCEEEEEES-S-C---CCHHHHHHHHTTEEEE--EEEEEE
T ss_pred -----------H---hhCCEEEEC-C-C---ChHHHHHHHHHhcCCC--cEEEEE
Confidence 1 479999974 2 2 2234899999999775 455543
|
| >1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=2.2e-06 Score=81.20 Aligned_cols=86 Identities=13% Similarity=0.133 Sum_probs=67.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|||+|||+|..+..+++. ..++++.|+ +.+++.++. ..++.+...|+.++.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----------~~~v~~~~~d~~~~~----------- 249 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG-----------NENLNFVGGDMFKSI----------- 249 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC-----------CSSEEEEECCTTTCC-----------
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc-----------CCCcEEEeCccCCCC-----------
Confidence 4579999999999999999887 458999999 687765432 134888888776521
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHH--HHHHHHHHhccC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTD--ALFHTLKRLMPL 243 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~--~l~~tl~~lL~~ 243 (330)
..||+|+++.++++....+ .+++.+.+.|++
T Consensus 250 ---------------~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p 282 (358)
T 1zg3_A 250 ---------------PSADAVLLKWVLHDWNDEQSLKILKNSKEAISH 282 (358)
T ss_dssp ---------------CCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGG
T ss_pred ---------------CCceEEEEcccccCCCHHHHHHHHHHHHHhCCC
Confidence 1499999999999876655 999999999987
|
| >2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45 | Back alignment and structure |
|---|
Probab=98.26 E-value=4e-06 Score=82.01 Aligned_cols=117 Identities=11% Similarity=0.052 Sum_probs=78.4
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---------------CCeEEEEeCchHHHHHHHHHHHHccCCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---------------AWTVFLTDHGNYILDNCAKNVQLNSGVF 169 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---------------~~~V~~TD~~~~~L~~~~~Nv~~N~~~~ 169 (330)
++++|.... ....+.+|||.|||+|...+.+++. ..++++.|+++.++..++.|+..++..
T Consensus 159 v~~~mv~~l---~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~- 234 (445)
T 2okc_A 159 LIQAMVDCI---NPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIG- 234 (445)
T ss_dssp HHHHHHHHH---CCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHh---CCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCC-
Confidence 344444432 2345789999999999888888764 368999999999999999999987641
Q ss_pred CCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCccc-----------------HHH
Q 020158 170 SHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDL-----------------TDA 232 (330)
Q Consensus 170 ~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~-----------------~~~ 232 (330)
...+.+...|..... ...+||+|++.-.+..... ...
T Consensus 235 --~~~~~i~~gD~l~~~------------------------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (445)
T 2okc_A 235 --TDRSPIVCEDSLEKE------------------------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLN 288 (445)
T ss_dssp --SSCCSEEECCTTTSC------------------------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHH
T ss_pred --cCCCCEeeCCCCCCc------------------------ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHH
Confidence 014455555543321 1137999999866543211 137
Q ss_pred HHHHHHHhccCCCCeEEEE
Q 020158 233 LFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 233 l~~tl~~lL~~~~~~~i~v 251 (330)
++..+.++|++++...+++
T Consensus 289 fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 289 FLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhccCCEEEEEE
Confidence 7888888998764433333
|
| >2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=2.5e-06 Score=82.10 Aligned_cols=102 Identities=15% Similarity=0.023 Sum_probs=70.6
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
..+++++.... ...++.+|||+|||+|..++.+++. +.+|+++|+++.+++.+ .++.+..
T Consensus 25 ~~l~~~~~~~~---~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------~~~~~~~ 87 (421)
T 2ih2_A 25 PEVVDFMVSLA---EAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------PWAEGIL 87 (421)
T ss_dssp HHHHHHHHHHC---CCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------TTEEEEE
T ss_pred HHHHHHHHHhh---ccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------CCCcEEe
Confidence 34677777664 2245679999999999999999875 47999999998887654 2355666
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc-----------------------------ccH
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD-----------------------------DLT 230 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~-----------------------------~~~ 230 (330)
.|+.+.. ...+||+|++.-..... +..
T Consensus 88 ~D~~~~~------------------------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (421)
T 2ih2_A 88 ADFLLWE------------------------PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLY 143 (421)
T ss_dssp SCGGGCC------------------------CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHH
T ss_pred CChhhcC------------------------ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHH
Confidence 5544321 12479999996444321 123
Q ss_pred HHHHHHHHHhccCCC
Q 020158 231 DALFHTLKRLMPLGS 245 (330)
Q Consensus 231 ~~l~~tl~~lL~~~~ 245 (330)
..+++.+.++|++++
T Consensus 144 ~~fl~~~~~~Lk~~G 158 (421)
T 2ih2_A 144 GAFLEKAVRLLKPGG 158 (421)
T ss_dssp HHHHHHHHHHEEEEE
T ss_pred HHHHHHHHHHhCCCC
Confidence 477888889998764
|
| >2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=98.21 E-value=7.2e-06 Score=76.61 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=58.0
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
++.+++.++ ....|.+|||+|||+|-.++.+|.. ..+|++.|+++.+++.+++|++.++. .++.+
T Consensus 90 ~s~l~~~~l-------~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-----~~v~~ 157 (309)
T 2b9e_A 90 ASCLPAMLL-------DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-----SCCEL 157 (309)
T ss_dssp GGGHHHHHH-------CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEE
T ss_pred HHHHHHHHh-------CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-----CeEEE
Confidence 445555554 2346789999999999999988875 36999999999999999999999873 46888
Q ss_pred EEecCCCC
Q 020158 178 RDLNWMNP 185 (330)
Q Consensus 178 ~~ldW~~~ 185 (330)
...|+.+.
T Consensus 158 ~~~D~~~~ 165 (309)
T 2b9e_A 158 AEEDFLAV 165 (309)
T ss_dssp EECCGGGS
T ss_pred EeCChHhc
Confidence 88776553
|
| >3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B* | Back alignment and structure |
|---|
Probab=98.21 E-value=8e-06 Score=73.89 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=56.5
Q ss_pred EeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCee
Q 020158 97 QVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSV 175 (330)
Q Consensus 97 ~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v 175 (330)
.+++.. +++.+.... ....+.+|||+|||+|..+..++..+ .+|++.|+++.+++.++.| . ..++
T Consensus 13 fl~d~~--i~~~iv~~~---~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~------~~~v 78 (249)
T 3ftd_A 13 LLVSEG--VLKKIAEEL---NIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---G------DERL 78 (249)
T ss_dssp CEECHH--HHHHHHHHT---TCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---C------CTTE
T ss_pred ccCCHH--HHHHHHHhc---CCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---c------CCCe
Confidence 345432 345555543 34568899999999999999999984 8999999999999999877 1 2567
Q ss_pred EEEEecCCCC
Q 020158 176 HVRDLNWMNP 185 (330)
Q Consensus 176 ~v~~ldW~~~ 185 (330)
++...|..+.
T Consensus 79 ~~i~~D~~~~ 88 (249)
T 3ftd_A 79 EVINEDASKF 88 (249)
T ss_dssp EEECSCTTTC
T ss_pred EEEEcchhhC
Confidence 7777776553
|
| >1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=3.7e-06 Score=78.35 Aligned_cols=60 Identities=13% Similarity=0.109 Sum_probs=51.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
-.+.+|||+|||+|..++.+++. +.+|++.|.++.+++.+++|+..++ .++.+...|+.+
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g------~~v~~v~~d~~~ 86 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS------DRVSLFKVSYRE 86 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT------TTEEEEECCGGG
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEECCHHH
Confidence 46789999999999999999987 4799999999999999999998764 467888777654
|
| >2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.2e-06 Score=72.83 Aligned_cols=62 Identities=23% Similarity=0.232 Sum_probs=48.4
Q ss_pred cccCCCCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCH-HHHHHHH-hCCeEEEEeCchHHHH
Q 020158 87 ITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGL-AGILLSR-VAWTVFLTDHGNYILD 156 (330)
Q Consensus 87 ~~t~~~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL-~gl~lA~-~~~~V~~TD~~~~~L~ 156 (330)
-++.+-..|.+.|+ .|++||..+. ..+.+|||+|||.|. ++..+|. .|..|++||+++..++
T Consensus 10 ~~~~~~~~~~~m~e---~LaeYI~~~~-----~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 10 HSSGLVPRGSHMWN---DLAVYIIRCS-----GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG 73 (153)
T ss_dssp CCCCCCCCCCHHHH---HHHHHHHHHS-----CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT
T ss_pred ccCCcccchhhHHH---HHHHHHHhcC-----CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc
Confidence 34556666777755 5999998763 335699999999995 9999997 7999999999965443
|
| >2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=1.3e-05 Score=74.67 Aligned_cols=50 Identities=18% Similarity=0.026 Sum_probs=38.8
Q ss_pred eEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeC
Q 020158 96 LQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDH 150 (330)
Q Consensus 96 ~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~ 150 (330)
..+=+++.-|...+... ...+|.+|||||||+|..+..+|+. .+|+++|+
T Consensus 62 ~~~sR~a~KL~~i~~~~----~~~~g~~VLDlGcG~G~~s~~la~~-~~V~gvD~ 111 (305)
T 2p41_A 62 HAVSRGSAKLRWFVERN----LVTPEGKVVDLGCGRGGWSYYCGGL-KNVREVKG 111 (305)
T ss_dssp CCSSTHHHHHHHHHHTT----SSCCCEEEEEETCTTSHHHHHHHTS-TTEEEEEE
T ss_pred CccccHHHHHHHHHHcC----CCCCCCEEEEEcCCCCHHHHHHHhc-CCEEEEec
Confidence 34555777777755442 3345789999999999999999988 68999999
|
| >3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=9.8e-06 Score=74.43 Aligned_cols=110 Identities=15% Similarity=0.183 Sum_probs=74.0
Q ss_pred CeEEEEcCcc---CHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 122 IISLELGAGT---GLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 122 ~~VLELG~Gt---GL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.+|||||||+ |.+..++.+. +.+|+.+|.++.||+.++.++..+. ..++.+...|..+....
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-----~~~~~~v~aD~~~~~~~-------- 146 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-----EGRTAYVEADMLDPASI-------- 146 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-----SSEEEEEECCTTCHHHH--------
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-----CCcEEEEEecccChhhh--------
Confidence 6899999997 4555444443 5799999999999999998875432 35788888887663100
Q ss_pred ccccccccCcc----chhccCCeeEEEEeccccCccc---HHHHHHHHHHhccCCCCeEEEEEee
Q 020158 197 ASQERYSWNSS----ELKEVQRASVLLAADVIYSDDL---TDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 197 ~~~~~~~w~~~----~~~~~~~~DlIlaaDviY~~~~---~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
|... .+ +......|++.-++++... ...+++.+.+.|++| +.++++..
T Consensus 147 -------l~~~~~~~~~-D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PG--G~Lvls~~ 201 (277)
T 3giw_A 147 -------LDAPELRDTL-DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSG--SYLAMSIG 201 (277)
T ss_dssp -------HTCHHHHTTC-CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTT--CEEEEEEE
T ss_pred -------hccccccccc-CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCC--cEEEEEec
Confidence 0000 00 0112225778889988665 468999999999876 45556543
|
| >3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=6e-06 Score=79.70 Aligned_cols=100 Identities=9% Similarity=0.045 Sum_probs=67.9
Q ss_pred CCCCeEEEEcCc------cCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCC
Q 020158 119 FNGIISLELGAG------TGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPI 189 (330)
Q Consensus 119 ~~g~~VLELG~G------tGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~ 189 (330)
.++.+||||||| ||..++.+++. +.+|+++|+++.|. .+ ..++++...|-.+..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~------~~rI~fv~GDa~dlp--- 277 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD------ELRIRTIQGDQNDAE--- 277 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC------BTTEEEEECCTTCHH---
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc------CCCcEEEEecccccc---
Confidence 357899999999 77667766654 57999999998862 11 357888888755420
Q ss_pred ccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 190 FSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 190 ~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+........++||+|++. ..++......+++.+.++|++| +++++.
T Consensus 278 --------------f~~~l~~~d~sFDlVisd-gsH~~~d~~~aL~el~rvLKPG--GvlVi~ 323 (419)
T 3sso_A 278 --------------FLDRIARRYGPFDIVIDD-GSHINAHVRTSFAALFPHVRPG--GLYVIE 323 (419)
T ss_dssp --------------HHHHHHHHHCCEEEEEEC-SCCCHHHHHHHHHHHGGGEEEE--EEEEEE
T ss_pred --------------hhhhhhcccCCccEEEEC-CcccchhHHHHHHHHHHhcCCC--eEEEEE
Confidence 000000113689999974 4555566778899999999775 566664
|
| >1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=98.08 E-value=5e-07 Score=81.19 Aligned_cols=70 Identities=11% Similarity=0.187 Sum_probs=54.8
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++.+.... ...++.+|||+|||+|..++.++..+.+|+++|+++.+++.+++|+.. ..++.+...|+.+.
T Consensus 18 ~~~i~~~~---~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~-------~~~v~~~~~D~~~~ 87 (245)
T 1yub_A 18 LNQIIKQL---NLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKL-------NTRVTLIHQDILQF 87 (245)
T ss_dssp HHHHHHHC---CCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTT-------CSEEEECCSCCTTT
T ss_pred HHHHHHhc---CCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhcc-------CCceEEEECChhhc
Confidence 34444442 334678999999999999999999999999999999999988877751 35778777776653
|
| >3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.07 E-value=7e-06 Score=75.59 Aligned_cols=68 Identities=10% Similarity=0.080 Sum_probs=54.0
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCe----EEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWT----VFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~----V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
++.|.... ....+.+|||+|||+|..+..++..+.+ |++.|+++.+++.+++|. . .++.+...|
T Consensus 31 ~~~iv~~~---~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~------~~v~~i~~D 98 (279)
T 3uzu_A 31 IDAIVAAI---RPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---G------ELLELHAGD 98 (279)
T ss_dssp HHHHHHHH---CCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---G------GGEEEEESC
T ss_pred HHHHHHhc---CCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---C------CCcEEEECC
Confidence 44455443 3456889999999999999999998777 999999999999999983 1 467888777
Q ss_pred CCCC
Q 020158 182 WMNP 185 (330)
Q Consensus 182 W~~~ 185 (330)
..+.
T Consensus 99 ~~~~ 102 (279)
T 3uzu_A 99 ALTF 102 (279)
T ss_dssp GGGC
T ss_pred hhcC
Confidence 6653
|
| >3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=1.6e-05 Score=82.26 Aligned_cols=111 Identities=16% Similarity=0.103 Sum_probs=78.5
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC-----------------------------------------
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA----------------------------------------- 142 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~----------------------------------------- 142 (330)
.||..|+... ..-.+.+|||.+||+|...|.+|..+
T Consensus 177 ~LAa~ll~~~---~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~ 253 (703)
T 3v97_A 177 TLAAAIVMRS---GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 253 (703)
T ss_dssp HHHHHHHHHT---TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhh---CCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccc
Confidence 5666666552 33467899999999999999888763
Q ss_pred ---CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEE
Q 020158 143 ---WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLL 219 (330)
Q Consensus 143 ---~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIl 219 (330)
.+|+++|+++.+++.++.|+..++. ...+.+...|..+..++. ..+.||+||
T Consensus 254 ~~~~~i~G~Did~~av~~A~~N~~~agv----~~~i~~~~~D~~~~~~~~---------------------~~~~~d~Iv 308 (703)
T 3v97_A 254 EYSSHFYGSDSDARVIQRARTNARLAGI----GELITFEVKDVAQLTNPL---------------------PKGPYGTVL 308 (703)
T ss_dssp HCCCCEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEECCGGGCCCSC---------------------TTCCCCEEE
T ss_pred cCCccEEEEECCHHHHHHHHHHHHHcCC----CCceEEEECChhhCcccc---------------------ccCCCCEEE
Confidence 4799999999999999999999885 355888888876542110 112799999
Q ss_pred EeccccC----cccHHHHHHHHHHhcc
Q 020158 220 AADVIYS----DDLTDALFHTLKRLMP 242 (330)
Q Consensus 220 aaDviY~----~~~~~~l~~tl~~lL~ 242 (330)
++-..-. ......+.+.+.+.++
T Consensus 309 ~NPPYG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 309 SNPPYGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp ECCCCCC---CCHHHHHHHHHHHHHHH
T ss_pred eCCCccccccchhHHHHHHHHHHHHHH
Confidence 8755321 2245556666655554
|
| >4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=9.7e-06 Score=82.54 Aligned_cols=116 Identities=14% Similarity=0.080 Sum_probs=80.8
Q ss_pred CeEeechHHHH--HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC----C--eEEEEeCchHHHHHHHHHHHHcc
Q 020158 95 GLQVWKAELVL--ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA----W--TVFLTDHGNYILDNCAKNVQLNS 166 (330)
Q Consensus 95 G~~vW~aa~~L--a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~----~--~V~~TD~~~~~L~~~~~Nv~~N~ 166 (330)
-....+.|+.. .+++.++ ....+++.||++|||+|.++..+++.| . +|++.+.++ +...+++++..|+
T Consensus 333 Ky~~Ye~AI~~Al~d~~~~~---~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~ 408 (637)
T 4gqb_A 333 KYSQYQQAIYKCLLDRVPEE---EKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEE 408 (637)
T ss_dssp HHHHHHHHHHHHHHHHSCGG---GTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhhhhc---cccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhcc
Confidence 33455566643 3444333 245677899999999999865555542 2 689999996 5667788888887
Q ss_pred CCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEE----eccccCcccHHHHHHHHHHhcc
Q 020158 167 GVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLA----ADVIYSDDLTDALFHTLKRLMP 242 (330)
Q Consensus 167 ~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIla----aDviY~~~~~~~l~~tl~~lL~ 242 (330)
. .++|++...|-.+. +..+++|+||+ +-.+| +... ..+....++|+
T Consensus 409 ~----~dkVtVI~gd~eev------------------------~LPEKVDIIVSEwMG~fLl~-E~ml-evL~Ardr~LK 458 (637)
T 4gqb_A 409 W----GSQVTVVSSDMREW------------------------VAPEKADIIVSELLGSFADN-ELSP-ECLDGAQHFLK 458 (637)
T ss_dssp T----GGGEEEEESCTTTC------------------------CCSSCEEEEECCCCBTTBGG-GCHH-HHHHHHGGGEE
T ss_pred C----CCeEEEEeCcceec------------------------cCCcccCEEEEEcCcccccc-cCCH-HHHHHHHHhcC
Confidence 5 58899999886653 23468999985 33333 4444 57788899998
Q ss_pred CC
Q 020158 243 LG 244 (330)
Q Consensus 243 ~~ 244 (330)
++
T Consensus 459 Pg 460 (637)
T 4gqb_A 459 DD 460 (637)
T ss_dssp EE
T ss_pred CC
Confidence 75
|
| >2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A | Back alignment and structure |
|---|
Probab=97.99 E-value=3.6e-06 Score=71.04 Aligned_cols=90 Identities=12% Similarity=0.034 Sum_probs=65.3
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.-.|.+||+||||+ | .+|+++.|++.++++... ++.+...|..+....
T Consensus 10 ~~~g~~vL~~~~g~-------------v-~vD~s~~ml~~a~~~~~~---------~~~~~~~d~~~~~~~--------- 57 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-------------S-PVEALKGLVDKLQALTGN---------EGRVSVENIKQLLQS--------- 57 (176)
T ss_dssp CCTTSEEEEEECTT-------------S-CHHHHHHHHHHHHHHTTT---------TSEEEEEEGGGGGGG---------
T ss_pred CCCCCEEEEecCCc-------------e-eeeCCHHHHHHHHHhccc---------CcEEEEechhcCccc---------
Confidence 34689999999996 2 389999999999887532 256666665432100
Q ss_pred cccccccCccchhccCCeeEEEEeccccCc-ccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSD-DLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~-~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.....+||+|+++.++++. .....+++.+.++|+++ +.+++.
T Consensus 58 -----------~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~Lkpg--G~l~~~ 100 (176)
T 2ld4_A 58 -----------AHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPG--GCLFLK 100 (176)
T ss_dssp -----------CCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEE--EEEEEE
T ss_pred -----------cCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCC--EEEEEE
Confidence 0013579999999999987 77899999999999876 455553
|
| >3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A | Back alignment and structure |
|---|
Probab=97.90 E-value=3e-05 Score=79.37 Aligned_cols=103 Identities=8% Similarity=0.116 Sum_probs=66.4
Q ss_pred CCCeEEEEcCccCHHHHHH---HHhC------------CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 120 NGIISLELGAGTGLAGILL---SRVA------------WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~l---A~~~------------~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
+++.||++|||+|.++..+ ++.+ .+|++.|.++.+...++.... |+. .++|++...+-.+
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~----~d~VtVI~gd~ee 483 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW----KRRVTIIESDMRS 483 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT----TTCSEEEESCGGG
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC----CCeEEEEeCchhh
Confidence 3568999999999887533 3212 399999999876655555444 664 4678888777544
Q ss_pred CCCCCccCCCCCccccccccCccchhccCCeeEEEEecccc--CcccHHHHHHHHHHhccCCC
Q 020158 185 PWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIY--SDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY--~~~~~~~l~~tl~~lL~~~~ 245 (330)
...+. .....+++|+||+==.=| +.++....+..+.++|++++
T Consensus 484 v~lp~------------------~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~G 528 (745)
T 3ua3_A 484 LPGIA------------------KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTT 528 (745)
T ss_dssp HHHHH------------------HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTC
T ss_pred ccccc------------------ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCc
Confidence 21000 000146899999632222 34566778888899998863
|
| >1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A | Back alignment and structure |
|---|
Probab=97.88 E-value=1e-05 Score=73.33 Aligned_cols=68 Identities=10% Similarity=0.112 Sum_probs=50.9
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCe--EEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWT--VFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~--V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
+++.|.+.. ....+.+|||+|||+|..+. +++ +.+ |++.|+++.+++.+++|+..+ .++++...|.
T Consensus 9 i~~~iv~~~---~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~-------~~v~~i~~D~ 76 (252)
T 1qyr_A 9 VIDSIVSAI---NPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG-------PKLTIYQQDA 76 (252)
T ss_dssp HHHHHHHHH---CCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG-------GGEEEECSCG
T ss_pred HHHHHHHhc---CCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC-------CceEEEECch
Confidence 445555543 33467899999999998888 654 567 999999999999999876432 3677777776
Q ss_pred CC
Q 020158 183 MN 184 (330)
Q Consensus 183 ~~ 184 (330)
.+
T Consensus 77 ~~ 78 (252)
T 1qyr_A 77 MT 78 (252)
T ss_dssp GG
T ss_pred hh
Confidence 54
|
| >2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A | Back alignment and structure |
|---|
Probab=97.77 E-value=3.3e-05 Score=70.27 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=39.6
Q ss_pred CeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHH
Q 020158 122 IISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
.+|||+|||+|..++.+|..|.+|++.|.++.+...++.|++.
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~ 132 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLAR 132 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH
Confidence 8999999999999999999988999999999998888888754
|
| >2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B* | Back alignment and structure |
|---|
Probab=97.75 E-value=8e-05 Score=74.70 Aligned_cols=111 Identities=11% Similarity=-0.032 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--------------------CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEE
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--------------------AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVR 178 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--------------------~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~ 178 (330)
..+.+|||.+||+|-..+.+++. ..++++.|+++.++..++.|+.+++........+.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 45789999999999888777754 1379999999999999999999876421000013333
Q ss_pred EecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc--------------cHHHHHHHHHHhccCC
Q 020158 179 DLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD--------------LTDALFHTLKRLMPLG 244 (330)
Q Consensus 179 ~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--------------~~~~l~~tl~~lL~~~ 244 (330)
..|.... ......+||+||+.-.+-... ..-.++..+.++|+++
T Consensus 248 ~gDtL~~----------------------~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~g 305 (541)
T 2ar0_A 248 LGNTLGS----------------------DGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPG 305 (541)
T ss_dssp ESCTTSH----------------------HHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEE
T ss_pred eCCCccc----------------------ccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCC
Confidence 3332111 001135799999976543221 1236788888888876
Q ss_pred CCeEEEE
Q 020158 245 SKKVLYL 251 (330)
Q Consensus 245 ~~~~i~v 251 (330)
+...+++
T Consensus 306 Gr~a~V~ 312 (541)
T 2ar0_A 306 GRAAVVV 312 (541)
T ss_dssp EEEEEEE
T ss_pred CEEEEEe
Confidence 5444433
|
| >3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00023 Score=73.93 Aligned_cols=131 Identities=14% Similarity=0.129 Sum_probs=81.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-----CeEEEEeCchHHHHHH--HHHHHHccCCCCCCCeeEEEEecCCCCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-----WTVFLTDHGNYILDNC--AKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFS 191 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-----~~V~~TD~~~~~L~~~--~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~ 191 (330)
..+.+|||.|||+|...+.+++.. .++++.|+++.++..+ +.|+..|..... .....+..-++....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhG-i~~~~I~~dD~L~~~----- 393 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSS-NNAPTITGEDVCSLN----- 393 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBT-TBCCEEECCCGGGCC-----
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcC-CCcceEEecchhccc-----
Confidence 457899999999999998888763 4799999999999999 778776653211 112233322222210
Q ss_pred CCCCCccccccccCccchhccCCeeEEEEeccccCc-----------------------------ccHHHHHHHHHHhcc
Q 020158 192 LGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD-----------------------------DLTDALFHTLKRLMP 242 (330)
Q Consensus 192 ~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~-----------------------------~~~~~l~~tl~~lL~ 242 (330)
.....+||+||+.-..... +....|+..+.++|+
T Consensus 394 -----------------~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLK 456 (878)
T 3s1s_A 394 -----------------PEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQ 456 (878)
T ss_dssp -----------------GGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSC
T ss_pred -----------------ccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcC
Confidence 1123579999997666220 124567788888898
Q ss_pred CCCCeEEEEEeeeeCcccccchhhhccccchhhhhhhh
Q 020158 243 LGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIME 280 (330)
Q Consensus 243 ~~~~~~i~va~~~R~~f~~~~~d~v~~~y~~f~~~l~~ 280 (330)
++|...+++. ...-+. -...+..+|.+|..
T Consensus 457 pGGrLAfIlP--~s~Lf~------sg~~~kkLRk~LLe 486 (878)
T 3s1s_A 457 DGTVISAIMP--KQYLTA------QGNESKAFREFLVG 486 (878)
T ss_dssp TTCEEEEEEE--THHHHC------CSHHHHHHHHHHTT
T ss_pred CCcEEEEEEC--hHHhcc------CChHHHHHHHHHHh
Confidence 8755444442 221110 00125677888763
|
| >2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A | Back alignment and structure |
|---|
Probab=97.65 E-value=7.8e-05 Score=68.89 Aligned_cols=58 Identities=19% Similarity=0.133 Sum_probs=48.7
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHc
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLN 165 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N 165 (330)
-|.+.+.... ...|..|||++||+|.+++++++.|.+++++|+++.+++.+++|+...
T Consensus 223 ~l~~~~i~~~----~~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 223 ELAERLVRMF----SFVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHH----CCTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----CCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 3445544442 246889999999999999999999999999999999999999999764
|
| >3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00094 Score=58.41 Aligned_cols=58 Identities=12% Similarity=0.078 Sum_probs=46.6
Q ss_pred CCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 120 NGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
+.++|||+|| |..++.+|+. +.+|+.+|.+++..+.++.|++.++.. ...++.+...+
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~--~~~~I~~~~gd 88 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPA--EGTEVNIVWTD 88 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCC--TTCEEEEEECC
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCC--CCCceEEEEeC
Confidence 3479999998 5788888887 689999999999999999999987631 02567777655
|
| >3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0014 Score=65.57 Aligned_cols=110 Identities=11% Similarity=0.047 Sum_probs=73.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-----CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-----AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-----~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
..+.+|+|.+||+|-..+.+++. ..++++.|+++.++..++.|+.+++.. ..++.+...|.....
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~---~~~~~I~~gDtL~~d------- 289 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP---IENQFLHNADTLDED------- 289 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC---GGGEEEEESCTTTSC-------
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC---cCccceEecceeccc-------
Confidence 46789999999999777777665 468999999999999999999988742 135666666544320
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccC-----------------------cccHHHHHHHHHHhcc-CCCCeEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYS-----------------------DDLTDALFHTLKRLMP-LGSKKVL 249 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~-----------------------~~~~~~l~~tl~~lL~-~~~~~~i 249 (330)
|.. ....+||+||+.-.+-. ...--.++..+.++|+ ++|...+
T Consensus 290 ----------~p~---~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~ 356 (542)
T 3lkd_A 290 ----------WPT---QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAI 356 (542)
T ss_dssp ----------SCC---SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEE
T ss_pred ----------ccc---cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEE
Confidence 100 01257898887633211 0011247888888888 7665555
Q ss_pred EE
Q 020158 250 YL 251 (330)
Q Consensus 250 ~v 251 (330)
++
T Consensus 357 Vl 358 (542)
T 3lkd_A 357 VL 358 (542)
T ss_dssp EE
T ss_pred Ee
Confidence 54
|
| >2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00032 Score=64.82 Aligned_cols=98 Identities=11% Similarity=0.170 Sum_probs=60.9
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCc------cCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCee
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAG------TGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSV 175 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~G------tGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v 175 (330)
+++|+.... ...-+|.+||||||| +|. ..+++. + .+|+++|+++. + .++
T Consensus 50 l~~~l~~~~--l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-----------------~~v 107 (290)
T 2xyq_A 50 LCQYLNTLT--LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-----------------SDA 107 (290)
T ss_dssp HHHHHTTSC--CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-----------------CSS
T ss_pred HHHHHHHhh--cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-----------------CCC
Confidence 666763211 133468899999994 465 444444 3 69999999976 1 134
Q ss_pred EE-EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC------------cccHHHHHHHHHHhcc
Q 020158 176 HV-RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS------------DDLTDALFHTLKRLMP 242 (330)
Q Consensus 176 ~v-~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~------------~~~~~~l~~tl~~lL~ 242 (330)
.+ ...|+.+.. ...+||+|++. .... ....+.+++.+.++|+
T Consensus 108 ~~~i~gD~~~~~------------------------~~~~fD~Vvsn-~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lk 162 (290)
T 2xyq_A 108 DSTLIGDCATVH------------------------TANKWDLIISD-MYDPRTKHVTKENDSKEGFFTYLCGFIKQKLA 162 (290)
T ss_dssp SEEEESCGGGCC------------------------CSSCEEEEEEC-CCCCC---CCSCCCCCCTHHHHHHHHHHHHEE
T ss_pred EEEEECccccCC------------------------ccCcccEEEEc-CCccccccccccccchHHHHHHHHHHHHHhcC
Confidence 45 666665431 11479999974 2111 2345688999999998
Q ss_pred CCCCeEEEE
Q 020158 243 LGSKKVLYL 251 (330)
Q Consensus 243 ~~~~~~i~v 251 (330)
++ +.+++
T Consensus 163 pG--G~~v~ 169 (290)
T 2xyq_A 163 LG--GSIAV 169 (290)
T ss_dssp EE--EEEEE
T ss_pred CC--cEEEE
Confidence 76 44444
|
| >3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0004 Score=69.66 Aligned_cols=45 Identities=11% Similarity=0.048 Sum_probs=38.0
Q ss_pred eEEEEcCccCHHHHHHHHh-----------------CCeEEEEeCchHHHHHHHHHHHHccC
Q 020158 123 ISLELGAGTGLAGILLSRV-----------------AWTVFLTDHGNYILDNCAKNVQLNSG 167 (330)
Q Consensus 123 ~VLELG~GtGL~gl~lA~~-----------------~~~V~~TD~~~~~L~~~~~Nv~~N~~ 167 (330)
+|||.+||+|-.-+.+++. ..++++.|+++.++..++.|+.+++.
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 308 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGI 308 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTC
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCC
Confidence 9999999999666665432 35899999999999999999999864
|
| >1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0006 Score=61.64 Aligned_cols=60 Identities=10% Similarity=0.075 Sum_probs=49.4
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHcc
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNS 166 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~ 166 (330)
..|++.+.... ..+|..|||..||+|.+++++++.|.+++++|+++..++.+++|+..|+
T Consensus 199 ~~l~~~~i~~~----~~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 199 RDLIERIIRAS----SNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHH----CCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHh----CCCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 34555555442 2567899999999999999999999999999999999999999998765
|
| >2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00027 Score=64.18 Aligned_cols=33 Identities=21% Similarity=0.129 Sum_probs=26.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh-------C-------CeEEEEeCch
Q 020158 120 NGIISLELGAGTGLAGILLSRV-------A-------WTVFLTDHGN 152 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~-------~-------~~V~~TD~~~ 152 (330)
++.+|||+|+|+|+..+++++. . .+|+..+..|
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p 106 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFP 106 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCc
Confidence 4579999999999998886653 1 3799999876
|
| >3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0023 Score=59.18 Aligned_cols=102 Identities=18% Similarity=0.233 Sum_probs=72.7
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHH-HccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQ-LNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~-~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
+.++||=||-|.|.+.-.+.+. ..+|++.|+++.+++.+++-+. .|...+. ..++++..-|-......
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~-dpRv~v~~~Dg~~~l~~-------- 153 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYD-DPRFKLVIDDGVNFVNQ-------- 153 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG-CTTEEEEESCTTTTTSC--------
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccC-CCcEEEEechHHHHHhh--------
Confidence 4689999999999888888876 4799999999999999997753 3432222 46788887775553211
Q ss_pred ccccccccCccchhccCCeeEEEE--eccccCcc--cHHHHHHHHHHhccCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLA--ADVIYSDD--LTDALFHTLKRLMPLG 244 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIla--aDviY~~~--~~~~l~~tl~~lL~~~ 244 (330)
..++||+||. .|...... ....+++.+++.|+++
T Consensus 154 --------------~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~ 191 (294)
T 3o4f_A 154 --------------TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPG 191 (294)
T ss_dssp --------------SSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEE
T ss_pred --------------ccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCC
Confidence 2358999984 22222111 4567899999999764
|
| >3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.013 Score=53.44 Aligned_cols=57 Identities=18% Similarity=-0.003 Sum_probs=46.4
Q ss_pred CCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCch
Q 020158 92 PSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGN 152 (330)
Q Consensus 92 ~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~ 152 (330)
..+|..+=+||.-|.+..... ..-.+.+|||||||+|-.+.+++.. ...|++.|++.
T Consensus 50 ~~~~~YrSRaA~KL~ei~ek~----~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGv 108 (277)
T 3evf_A 50 VDTGVAVSRGTAKLRWFHERG----YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGR 108 (277)
T ss_dssp CSSCBCSSTHHHHHHHHHHTT----SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred ccCCCccccHHHHHHHHHHhC----CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEec
Confidence 456888999999999988763 3345779999999999999988875 35788899874
|
| >4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.012 Score=56.01 Aligned_cols=108 Identities=17% Similarity=0.154 Sum_probs=66.9
Q ss_pred eechHHHHHHHHhhhcC----CCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCC
Q 020158 98 VWKAELVLADFVMHKMC----TSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQG 173 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~----~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~ 173 (330)
.=+|.+-|.+-+..... ....-.|.+||||||.+|--+-.++++|.+|++.|..+ |-. .+.. .+
T Consensus 185 pSRa~lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~~----~l~~-------~~ 252 (375)
T 4auk_A 185 PSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MAQ----SLMD-------TG 252 (375)
T ss_dssp SCTTHHHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CCH----HHHT-------TT
T ss_pred CCHHHHHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cCh----hhcc-------CC
Confidence 45667777765433210 01234699999999999999999999999999999874 211 1111 35
Q ss_pred eeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 174 SVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 174 ~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
+|.+...|-....+ ...++|+|++ |+.-++ ...+..+.+.+..+
T Consensus 253 ~V~~~~~d~~~~~~-----------------------~~~~~D~vvs-Dm~~~p---~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 253 QVTWLREDGFKFRP-----------------------TRSNISWMVC-DMVEKP---AKVAALMAQWLVNG 296 (375)
T ss_dssp CEEEECSCTTTCCC-----------------------CSSCEEEEEE-CCSSCH---HHHHHHHHHHHHTT
T ss_pred CeEEEeCccccccC-----------------------CCCCcCEEEE-cCCCCh---HHhHHHHHHHHhcc
Confidence 67776665433211 1257999986 665543 34455555555443
|
| >2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.031 Score=51.17 Aligned_cols=103 Identities=18% Similarity=0.173 Sum_probs=66.6
Q ss_pred CCCeEEEEcCccCHHHHHHHHh-------CCeEEEEeCch--------------------------HHHHHHHHHHHHcc
Q 020158 120 NGIISLELGAGTGLAGILLSRV-------AWTVFLTDHGN--------------------------YILDNCAKNVQLNS 166 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~-------~~~V~~TD~~~--------------------------~~L~~~~~Nv~~N~ 166 (330)
..++|||+|+.+|..++.+|.. ..+|++.|..+ ..++.+++|++..+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 4569999999999999888754 46899999531 14677889998876
Q ss_pred CCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEE-eccccCcccHHHHHHHHHHhccCCC
Q 020158 167 GVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLA-ADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 167 ~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIla-aDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
.. ..++.+...+..+..+.. ...+||+|.. +| .| ..+...+..+..+|++|
T Consensus 186 l~---~~~I~li~Gda~etL~~~---------------------~~~~~d~vfIDaD-~y--~~~~~~Le~~~p~L~pG- 237 (282)
T 2wk1_A 186 LL---DEQVRFLPGWFKDTLPTA---------------------PIDTLAVLRMDGD-LY--ESTWDTLTNLYPKVSVG- 237 (282)
T ss_dssp CC---STTEEEEESCHHHHSTTC---------------------CCCCEEEEEECCC-SH--HHHHHHHHHHGGGEEEE-
T ss_pred CC---cCceEEEEeCHHHHHhhC---------------------CCCCEEEEEEcCC-cc--ccHHHHHHHHHhhcCCC-
Confidence 31 267888887765432211 1247888764 33 22 22445667777777654
Q ss_pred CeEEEE
Q 020158 246 KKVLYL 251 (330)
Q Consensus 246 ~~~i~v 251 (330)
+++++
T Consensus 238 -GiIv~ 242 (282)
T 2wk1_A 238 -GYVIV 242 (282)
T ss_dssp -EEEEE
T ss_pred -EEEEE
Confidence 44444
|
| >4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A* | Back alignment and structure |
|---|
Probab=95.47 E-value=0.074 Score=50.36 Aligned_cols=75 Identities=17% Similarity=0.063 Sum_probs=55.4
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCC-CCCeeE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFS-HQGSVH 176 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~-~~~~v~ 176 (330)
.+|.+-+..| ..-.|.+|||+.||.|-=++.+|..+ ..|++.|+++.-+..+++|+...+.... ...++.
T Consensus 135 ~aS~l~~~~L-------~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~ 207 (359)
T 4fzv_A 135 AASLLPVLAL-------GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVR 207 (359)
T ss_dssp GGGHHHHHHH-------CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEE
T ss_pred HHHHHHHHHh-------CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceE
Confidence 5666666655 33468899999999997777777764 4799999999999999999988754211 124566
Q ss_pred EEEec
Q 020158 177 VRDLN 181 (330)
Q Consensus 177 v~~ld 181 (330)
+...|
T Consensus 208 v~~~D 212 (359)
T 4fzv_A 208 VTSWD 212 (359)
T ss_dssp EECCC
T ss_pred EEeCc
Confidence 66555
|
| >2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59 | Back alignment and structure |
|---|
Probab=95.38 E-value=0.0023 Score=58.68 Aligned_cols=129 Identities=12% Similarity=0.085 Sum_probs=88.2
Q ss_pred eEeech----HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCC
Q 020158 96 LQVWKA----ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSH 171 (330)
Q Consensus 96 ~~vW~a----a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~ 171 (330)
.++|.+ .-.|..|+.-- ..+++..+||+=+|+|.+|+-+.+.+.+++++|.++..++.+++|+..
T Consensus 67 ~rl~~~~~~~p~~l~~yf~~l----~~~n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~------- 135 (283)
T 2oo3_A 67 NPVWLDRENLPSLFLEYISVI----KQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHF------- 135 (283)
T ss_dssp HHHHHTGGGSCGGGHHHHHHH----HHHSSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCT-------
T ss_pred HHHHhcccCCcHHHHHHHHHH----HHhcCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCc-------
Confidence 356762 22345555432 126778899999999999999988888999999999999999999864
Q ss_pred CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC-cccHHHHHHHHHHhccCCCCeEEE
Q 020158 172 QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS-DDLTDALFHTLKRLMPLGSKKVLY 250 (330)
Q Consensus 172 ~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~-~~~~~~l~~tl~~lL~~~~~~~i~ 250 (330)
..++++...|-..... .......+||+|+. |.=|. ....+.+++.|.+.....+.+++.
T Consensus 136 ~~~~~V~~~D~~~~L~-------------------~l~~~~~~fdLVfi-DPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v 195 (283)
T 2oo3_A 136 NKKVYVNHTDGVSKLN-------------------ALLPPPEKRGLIFI-DPSYERKEEYKEIPYAIKNAYSKFSTGLYC 195 (283)
T ss_dssp TSCEEEECSCHHHHHH-------------------HHCSCTTSCEEEEE-CCCCCSTTHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCcEEEEeCcHHHHHH-------------------HhcCCCCCccEEEE-CCCCCCCcHHHHHHHHHHHhCccCCCeEEE
Confidence 2567777666221100 00011246999884 66666 578888998888876655566666
Q ss_pred EEeee
Q 020158 251 LALEK 255 (330)
Q Consensus 251 va~~~ 255 (330)
+=++.
T Consensus 196 ~WYPi 200 (283)
T 2oo3_A 196 VWYPV 200 (283)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 64443
|
| >3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.22 Score=49.53 Aligned_cols=49 Identities=16% Similarity=-0.006 Sum_probs=39.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---------------CCeEEEEeCchHHHHHHHHHHHHccC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---------------AWTVFLTDHGNYILDNCAKNVQLNSG 167 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---------------~~~V~~TD~~~~~L~~~~~Nv~~N~~ 167 (330)
..+.+|+|-.||+|-.-+.+... ...+++.|+++.+...++.|+.+++.
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~ 279 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGL 279 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCC
Confidence 46779999999999665555442 24699999999999999999999874
|
| >2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56 | Back alignment and structure |
|---|
Probab=95.14 E-value=0.05 Score=52.33 Aligned_cols=45 Identities=13% Similarity=0.082 Sum_probs=40.8
Q ss_pred CCCeEEEEcCccCHHHHHHH-Hh-C--CeEEEEeCchHHHHHHHHHHHH
Q 020158 120 NGIISLELGAGTGLAGILLS-RV-A--WTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA-~~-~--~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
++..|+|+||+.|..++.++ +. + .+|++.+.+|...+.+++|+..
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 67899999999999999887 44 3 6999999999999999999998
|
| >3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.07 E-value=0.13 Score=48.82 Aligned_cols=45 Identities=9% Similarity=0.013 Sum_probs=33.0
Q ss_pred cCCeeEEEEeccccCcc--------------------------------------cHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 212 VQRASVLLAADVIYSDD--------------------------------------LTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 212 ~~~~DlIlaaDviY~~~--------------------------------------~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
..++|+|+++=++++-. +...+++...+-|++| +.++++.
T Consensus 148 ~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pG--G~mvl~~ 225 (374)
T 3b5i_A 148 ARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRG--GAMFLVC 225 (374)
T ss_dssp TTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEEE
T ss_pred CcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CEEEEEE
Confidence 46899999999999854 3445788889999875 4555655
Q ss_pred eeeCc
Q 020158 254 EKRYN 258 (330)
Q Consensus 254 ~~R~~ 258 (330)
.-|.+
T Consensus 226 ~gr~~ 230 (374)
T 3b5i_A 226 LGRTS 230 (374)
T ss_dssp EECCC
T ss_pred ecCCC
Confidence 56654
|
| >1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24 | Back alignment and structure |
|---|
Probab=95.05 E-value=0.044 Score=51.79 Aligned_cols=55 Identities=9% Similarity=0.110 Sum_probs=44.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
.+..|||+|.|+|..+..++.. +++|++.++++.+++.++... . .+++++...|.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-------~~~l~ii~~D~ 114 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-------GSPLQILKRDP 114 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-------TSSCEEECSCT
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-------CCCEEEEECCc
Confidence 4689999999999888888875 679999999999999998776 2 24566666554
|
| >3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A* | Back alignment and structure |
|---|
Probab=94.86 E-value=0.15 Score=48.52 Aligned_cols=105 Identities=15% Similarity=0.169 Sum_probs=65.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHH-ccCCCCC--CCeeEEEEecCCCCCCCCccCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQL-NSGVFSH--QGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~-N~~~~~~--~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
+.++||=||.|.|.+.-.+.+. ..+|++.|+++.+++.+++-+.. +...... ..++++..-|...
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~----------- 273 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIP----------- 273 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHH-----------
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHH-----------
Confidence 4689999999999888777776 57899999999999999976422 2111110 1234554443221
Q ss_pred CccccccccCccchhccCCeeEEEEecccc---C--------cccHHHHHHHHHHhccCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIY---S--------DDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY---~--------~~~~~~l~~tl~~lL~~~ 244 (330)
|-....+...+||+||. |+.- . .-....+++.+++.|+++
T Consensus 274 --------fl~~~~~~~~~yDvIIv-Dl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~ 324 (381)
T 3c6k_A 274 --------VLKRYAKEGREFDYVIN-DLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQD 324 (381)
T ss_dssp --------HHHHHHHHTCCEEEEEE-ECCSSCCCCC----CHHHHHHHHHHHHHHTEEEE
T ss_pred --------HHHhhhhccCceeEEEE-CCCCCcccCcccCcchHHHHHHHHHHHHHhcCCC
Confidence 10000112357999985 3321 1 113467889999999764
|
| >1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23 | Back alignment and structure |
|---|
Probab=94.60 E-value=0.052 Score=49.66 Aligned_cols=42 Identities=10% Similarity=-0.067 Sum_probs=38.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHH
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~ 160 (330)
-.|..+||.+||.|--+..++..+.+|++.|.++.+++.++.
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 457899999999999999888887899999999999999887
|
| >4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=94.57 E-value=0.52 Score=44.58 Aligned_cols=124 Identities=19% Similarity=0.133 Sum_probs=76.6
Q ss_pred CcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCC
Q 020158 93 SVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQ 172 (330)
Q Consensus 93 ~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~ 172 (330)
...+|-|+||- +||+.+.. ....+.+||-+|.+-|.++..++..+. +..+| +--....++.|+..|+.. .
T Consensus 16 ~~~l~a~da~d---~~ll~~~~--~~~~~~~~~~~~d~~gal~~~~~~~~~-~~~~d-s~~~~~~~~~n~~~~~~~---~ 85 (375)
T 4dcm_A 16 VNPLQAWEAAD---EYLLQQLD--DTEIRGPVLILNDAFGALSCALAEHKP-YSIGD-SYISELATRENLRLNGID---E 85 (375)
T ss_dssp SCSCCSCCHHH---HHHHHTTT--TCCCCSCEEEECCSSSHHHHHTGGGCC-EEEES-CHHHHHHHHHHHHHTTCC---G
T ss_pred CCCCCccchHH---HHHHHhhh--hccCCCCEEEECCCCCHHHHhhccCCc-eEEEh-HHHHHHHHHHHHHHcCCC---c
Confidence 35789999975 35555531 222557899999999998888775433 33466 434556788999999742 1
Q ss_pred CeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccC-CCCeEEEE
Q 020158 173 GSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPL-GSKKVLYL 251 (330)
Q Consensus 173 ~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~-~~~~~i~v 251 (330)
..+.+ ++..+. ....+|+|+ +|-+.....+...|..++.. .++..+++
T Consensus 86 ~~~~~--~~~~~~-------------------------~~~~~~~v~----~~lpk~~~~l~~~L~~l~~~l~~~~~i~~ 134 (375)
T 4dcm_A 86 SSVKF--LDSTAD-------------------------YPQQPGVVL----IKVPKTLALLEQQLRALRKVVTSDTRIIA 134 (375)
T ss_dssp GGSEE--EETTSC-------------------------CCSSCSEEE----EECCSCHHHHHHHHHHHHTTCCTTSEEEE
T ss_pred cceEe--cccccc-------------------------cccCCCEEE----EEcCCCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 22333 332222 135789886 46677777776666666642 23455666
Q ss_pred EeeeeC
Q 020158 252 ALEKRY 257 (330)
Q Consensus 252 a~~~R~ 257 (330)
..+.+.
T Consensus 135 ~g~~~~ 140 (375)
T 4dcm_A 135 GAKARD 140 (375)
T ss_dssp EEEGGG
T ss_pred Eecccc
Confidence 655553
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=93.84 E-value=0.017 Score=67.35 Aligned_cols=96 Identities=14% Similarity=0.126 Sum_probs=42.1
Q ss_pred CCCeEEEEcCccCHH-HHHHHHhC------CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccC
Q 020158 120 NGIISLELGAGTGLA-GILLSRVA------WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSL 192 (330)
Q Consensus 120 ~g~~VLELG~GtGL~-gl~lA~~~------~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~ 192 (330)
...+|||+|+|||-. ..++...+ .++++||+++...+.++..+..- .+. .-.|....+..
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~--------di~--~~~~d~~~~~~--- 1306 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL--------HVT--QGQWDPANPAP--- 1306 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH--------TEE--EECCCSSCCCC---
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc--------ccc--ccccccccccc---
Confidence 356999999999843 33333332 37999999987666655544320 111 11222110000
Q ss_pred CCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 193 GNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 193 ~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
. ....||+||++++++-.......++.+.++|++++
T Consensus 1307 ----------------~-~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G 1342 (2512)
T 2vz8_A 1307 ----------------G-SLGKADLLVCNCALATLGDPAVAVGNMAATLKEGG 1342 (2512)
T ss_dssp ----------------------CCEEEEECC--------------------CC
T ss_pred ----------------C-CCCceeEEEEcccccccccHHHHHHHHHHhcCCCc
Confidence 0 12469999999999877777888888999998875
|
| >3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus} | Back alignment and structure |
|---|
Probab=93.18 E-value=0.096 Score=48.16 Aligned_cols=60 Identities=17% Similarity=-0.021 Sum_probs=48.1
Q ss_pred cCCCCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-C-CeEEEEeCch
Q 020158 89 SLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-A-WTVFLTDHGN 152 (330)
Q Consensus 89 t~~~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~-~~V~~TD~~~ 152 (330)
.....+|..+=+++.-|-+..... ....+.+||||||++|-.+..++.. + ..|++.|+..
T Consensus 67 ~g~~~~g~y~SR~~~KL~ei~~~~----~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~ 128 (321)
T 3lkz_A 67 EGNVTGGHPVSRGTAKLRWLVERR----FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGG 128 (321)
T ss_dssp HTCCSSCCCSSTHHHHHHHHHHTT----SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCS
T ss_pred cCcCcCCCccchHHHHHHHHHHhc----CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCC
Confidence 444677999999999998877653 3456779999999999999977766 3 5799999973
|
| >3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus} | Back alignment and structure |
|---|
Probab=92.84 E-value=0.12 Score=47.20 Aligned_cols=54 Identities=19% Similarity=0.102 Sum_probs=44.4
Q ss_pred CeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCch
Q 020158 95 GLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGN 152 (330)
Q Consensus 95 G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~ 152 (330)
|..+=+||+-|.+..... ....+.+|||||||+|-.+.+++.. ...|++.|++.
T Consensus 69 g~YrSRAAfKL~ei~eK~----~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~ 124 (282)
T 3gcz_A 69 GIAVSRGSAKLRWMEERG----YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGV 124 (282)
T ss_dssp SBCSSTHHHHHHHHHHTT----SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred CCEecHHHHHHHHHHHhc----CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEecc
Confidence 888889999999987654 3456779999999999999988864 35789999974
|
| >2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ... | Back alignment and structure |
|---|
Probab=92.33 E-value=0.25 Score=45.94 Aligned_cols=46 Identities=20% Similarity=0.278 Sum_probs=40.0
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCC-eEEEEeCchHHHHHHHHHH
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAW-TVFLTDHGNYILDNCAKNV 162 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~-~V~~TD~~~~~L~~~~~Nv 162 (330)
....+.+||||.||+|-.++.+...|. .|++.|+++.+++..+.|.
T Consensus 7 ~~~~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~ 53 (327)
T 2c7p_A 7 KQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNF 53 (327)
T ss_dssp CTTTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHH
T ss_pred cccCCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc
Confidence 345678999999999999999988876 5778999999999999987
|
| >1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11 | Back alignment and structure |
|---|
Probab=92.15 E-value=0.18 Score=46.75 Aligned_cols=57 Identities=11% Similarity=0.110 Sum_probs=46.7
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHH
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
-|.+.+.... .-+|..|||-=||+|-+++++.++|.+.+++|+++...+.++.++..
T Consensus 240 ~l~~~~i~~~----~~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 240 KLPEFFIRML----TEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp HHHHHHHHHH----CCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSC
T ss_pred HHHHHHHHHh----CCCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHHh
Confidence 3445544432 24678999999999999999999999999999999999998888754
|
| >3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A* | Back alignment and structure |
|---|
Probab=91.90 E-value=0.22 Score=44.47 Aligned_cols=54 Identities=19% Similarity=0.078 Sum_probs=43.5
Q ss_pred CeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCch
Q 020158 95 GLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGN 152 (330)
Q Consensus 95 G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~ 152 (330)
|..+=+|+.-|-+-.... ....+.+||||||++|-.+..++.. +.+|++.|+.+
T Consensus 57 g~yrSRa~~KL~ei~ek~----~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~ 112 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERN----MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGG 112 (267)
T ss_dssp SCCSSTHHHHHHHHHHTT----SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCS
T ss_pred CCccchHHHHHHHHHHhc----CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCC
Confidence 777888899888876554 3356789999999999999988776 36899999973
|
| >1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26 | Back alignment and structure |
|---|
Probab=91.08 E-value=0.27 Score=45.93 Aligned_cols=42 Identities=21% Similarity=0.094 Sum_probs=37.5
Q ss_pred CeEEEEcCccCHHHHHHHHhC---CeEEEEeCchHHHHHHHHHHH
Q 020158 122 IISLELGAGTGLAGILLSRVA---WTVFLTDHGNYILDNCAKNVQ 163 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~~---~~V~~TD~~~~~L~~~~~Nv~ 163 (330)
.+||||-||+|-.++.+...| ..|++.|+++.+++..+.|..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~ 47 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP 47 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc
Confidence 589999999999999999887 369999999999999998873
|
| >2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* | Back alignment and structure |
|---|
Probab=91.03 E-value=1.3 Score=42.05 Aligned_cols=31 Identities=23% Similarity=0.213 Sum_probs=24.6
Q ss_pred CCeEEEEcCccCHHHHHHHHh-------------------CCeEEEEeCc
Q 020158 121 GIISLELGAGTGLAGILLSRV-------------------AWTVFLTDHG 151 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~-------------------~~~V~~TD~~ 151 (330)
..+|+||||++|-.++.+... ..+|++.|+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp 102 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLF 102 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCC
Confidence 578999999999887766554 1478999986
|
| >1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A | Back alignment and structure |
|---|
Probab=90.43 E-value=0.43 Score=44.21 Aligned_cols=59 Identities=14% Similarity=0.151 Sum_probs=47.6
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCch---HHHHHHHHHHHHc
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGN---YILDNCAKNVQLN 165 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~---~~L~~~~~Nv~~N 165 (330)
.-|.+++.... .-+|..|||-=||+|-+++++.++|.+.+++|+++ ...+.++.++...
T Consensus 229 ~~l~~~~i~~~----~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 229 AAVIERLVRAL----SHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp HHHHHHHHHHH----SCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHh----CCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHc
Confidence 45666666542 24678999999999999999999999999999999 9999988887643
|
| >3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A* | Back alignment and structure |
|---|
Probab=90.40 E-value=0.33 Score=44.58 Aligned_cols=57 Identities=18% Similarity=0.013 Sum_probs=46.7
Q ss_pred CCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCch
Q 020158 92 PSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGN 152 (330)
Q Consensus 92 ~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~ 152 (330)
.++|...=+|++-|.+.... . ...+|++||||||++|-.+.+++.. ...|++.|+..
T Consensus 57 ~~~g~yrSRaa~KL~ei~ek-~---l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~ 115 (300)
T 3eld_A 57 TDVGISVSRGAAKIRWLHER-G---YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGI 115 (300)
T ss_dssp SSSCCCSSTTHHHHHHHHHH-T---SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred ccCCCccchHHHHHHHHHHh-C---CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecc
Confidence 45688888999999998876 3 3457899999999999999999975 35789999874
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=89.05 E-value=1.1 Score=41.16 Aligned_cols=44 Identities=18% Similarity=0.192 Sum_probs=35.6
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
..-.|.+||=.|||. |+..+.+|+. |.+|++||.+++-++.+++
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR 208 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 456789999999985 8888777775 7899999999887776653
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=88.25 E-value=0.99 Score=42.60 Aligned_cols=43 Identities=21% Similarity=0.128 Sum_probs=34.4
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CC-eEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AW-TVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~-~V~~TD~~~~~L~~~~ 159 (330)
..-.|.+||-+|||. |+..+.+|+. |. +|+++|.+++-++.++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 445789999999985 8877777775 76 9999999987777664
|
| >2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.01 E-value=1.1 Score=41.00 Aligned_cols=44 Identities=11% Similarity=-0.003 Sum_probs=37.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCe---EEEEeCchHHHHHHHHHH
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWT---VFLTDHGNYILDNCAKNV 162 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~---V~~TD~~~~~L~~~~~Nv 162 (330)
-.+.+||||=||+|-.++.+.+.|.+ |.+.|+++.+.+..+.|.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~ 60 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH 60 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC
Confidence 35679999999999999998888854 589999998888877774
|
| >3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157} | Back alignment and structure |
|---|
Probab=87.42 E-value=0.92 Score=42.96 Aligned_cols=41 Identities=15% Similarity=0.205 Sum_probs=36.1
Q ss_pred CeEEEEcCccCHHHHHHHHhCCe-EEEEeCchHHHHHHHHHH
Q 020158 122 IISLELGAGTGLAGILLSRVAWT-VFLTDHGNYILDNCAKNV 162 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~~~~-V~~TD~~~~~L~~~~~Nv 162 (330)
.+||||-||+|-.++.+...|.+ |.+.|+++.+++..+.|.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~ 44 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF 44 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC
Confidence 58999999999999999888875 669999999988888875
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=87.11 E-value=6 Score=33.72 Aligned_cols=40 Identities=18% Similarity=0.091 Sum_probs=26.7
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh----CCeEEEEeCchHHHHH
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV----AWTVFLTDHGNYILDN 157 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~----~~~V~~TD~~~~~L~~ 157 (330)
..++|++||=.|+ +|.+|..+++. |.+|++++.++.-++.
T Consensus 17 ~~l~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~ 60 (236)
T 3e8x_A 17 LYFQGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPE 60 (236)
T ss_dssp ----CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred cCcCCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHH
Confidence 4578999999996 45556555543 7899999999765543
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=86.22 E-value=1.2 Score=40.99 Aligned_cols=44 Identities=11% Similarity=0.004 Sum_probs=34.6
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||=+|||. |+..+.+|+. |.+|+++|.+++-++.+++
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS 218 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh
Confidence 456789999999975 7777777765 7899999999877776653
|
| >1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 | Back alignment and structure |
|---|
Probab=85.33 E-value=0.74 Score=43.44 Aligned_cols=44 Identities=14% Similarity=0.308 Sum_probs=30.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh------------C------CeEEEEeCchHHHHHHHHHHH
Q 020158 120 NGIISLELGAGTGLAGILLSRV------------A------WTVFLTDHGNYILDNCAKNVQ 163 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~------------~------~~V~~TD~~~~~L~~~~~Nv~ 163 (330)
+..+|+||||++|-.++.+... + .+|++.|+.......+-+++.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~ 112 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLP 112 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTT
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcc
Confidence 3468999999999666654332 1 478899998766666655543
|
| >2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A* | Back alignment and structure |
|---|
Probab=85.21 E-value=1.6 Score=39.34 Aligned_cols=56 Identities=18% Similarity=0.023 Sum_probs=40.2
Q ss_pred CCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCc
Q 020158 92 PSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHG 151 (330)
Q Consensus 92 ~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~ 151 (330)
.++|...=+|+.-|.+--... -.-+|.+||||||+.|--+.+++.. ...|.+.++.
T Consensus 49 ~~~g~yRSRAayKL~EIdeK~----likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig 106 (269)
T 2px2_A 49 KVGGHPVSRGTAKLRWLVERR----FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKG 106 (269)
T ss_dssp -CCSCCSSTHHHHHHHHHHTT----SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCC
T ss_pred CcCCCcccHHHHHHHHHHHcC----CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEc
Confidence 456888888898888765432 2335889999999999999999987 3344454444
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=85.05 E-value=2.3 Score=39.48 Aligned_cols=44 Identities=20% Similarity=0.234 Sum_probs=34.7
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CC-eEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AW-TVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~-~V~~TD~~~~~L~~~~~ 160 (330)
..-.|.+||-+|||. |+..+.+|+. |. +|+++|.+++-++.+++
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 445789999999885 7777777765 66 79999999887777753
|
| >1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A | Back alignment and structure |
|---|
Probab=84.90 E-value=2.7 Score=39.00 Aligned_cols=103 Identities=12% Similarity=0.136 Sum_probs=65.0
Q ss_pred CCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCC--------CC--------CCCeeEEEEecC
Q 020158 121 GIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGV--------FS--------HQGSVHVRDLNW 182 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~--------~~--------~~~~v~v~~ldW 182 (330)
.+.|+.||||..-...-+... +.+++=.|+ |++++.=++-+..+... .. ...+......|.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 368999999999877777654 345666666 78887766655544210 00 024566666665
Q ss_pred CCCCCCCccCCCCCccccccccCccchh---ccCCeeEEEEeccccC--cccHHHHHHHHHHhc
Q 020158 183 MNPWPPIFSLGNSSASQERYSWNSSELK---EVQRASVLLAADVIYS--DDLTDALFHTLKRLM 241 (330)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~---~~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL 241 (330)
.+. .|.+..+. ......++|+--|+++ ++....+++.+...+
T Consensus 177 ~d~-----------------~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~ 223 (334)
T 1rjd_A 177 NDI-----------------TETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF 223 (334)
T ss_dssp TCH-----------------HHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC
T ss_pred CCc-----------------HHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC
Confidence 542 22111111 2246789999888877 557788888888877
|
| >3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=84.56 E-value=1.6 Score=40.52 Aligned_cols=42 Identities=17% Similarity=0.065 Sum_probs=36.6
Q ss_pred CCeEEEEcCccCHHHHHHHHhC---CeE-EEEeCchHHHHHHHHHH
Q 020158 121 GIISLELGAGTGLAGILLSRVA---WTV-FLTDHGNYILDNCAKNV 162 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~~---~~V-~~TD~~~~~L~~~~~Nv 162 (330)
..+|+||-||+|-.++.+...| ..| .+.|+++.+.+..+.|.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~ 55 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNF 55 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHH
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHC
Confidence 4589999999999999998887 356 69999999999988887
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=84.40 E-value=3.5 Score=36.73 Aligned_cols=62 Identities=11% Similarity=0.070 Sum_probs=47.6
Q ss_pred CCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 118 DFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.++||++|==|++.|+ ++..+|+.|++|+++|.+++-++.+.+.+...+ .++.+...|-.+.
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g------~~~~~~~~Dvt~~ 68 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG------KEVLGVKADVSKK 68 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTSH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEccCCCH
Confidence 4789999999998885 344455568999999999988888877776543 5677777876654
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=84.31 E-value=2.1 Score=39.91 Aligned_cols=44 Identities=18% Similarity=0.105 Sum_probs=34.3
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
..-.|.+||-+|+|. |+..+.+|+. |++|+++|.+++-++.+++
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 345789999999984 7777777765 7899999999887777663
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=84.27 E-value=2.6 Score=39.15 Aligned_cols=44 Identities=20% Similarity=0.213 Sum_probs=34.7
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
..-.|.+||=+|+|. |+..+.+|+. |++|+++|.+++-++.+++
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Confidence 455789999999885 7777777765 7899999999877776643
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=84.25 E-value=2.6 Score=39.60 Aligned_cols=43 Identities=26% Similarity=0.226 Sum_probs=34.3
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CC-eEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AW-TVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~-~V~~TD~~~~~L~~~~ 159 (330)
..-.|.+||=+|||. |+..+.+|+. |+ +|+++|.+++-++.++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAK 227 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH
Confidence 345789999999875 8888777775 65 7999999988777765
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=84.16 E-value=2.5 Score=39.12 Aligned_cols=43 Identities=26% Similarity=0.308 Sum_probs=33.8
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CC-eEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AW-TVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~-~V~~TD~~~~~L~~~~ 159 (330)
..-.|.+||-+|||. |+..+.+|+. |. +|+++|.+++-++.++
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 213 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK 213 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 345789999999885 7777777765 66 9999999987777665
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=83.56 E-value=2 Score=39.76 Aligned_cols=44 Identities=18% Similarity=0.206 Sum_probs=33.9
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
..-.|.+||-+|+|. |+..+.+|+. |.+|+++|.+++-++.+++
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK 221 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 445789999999964 7766666664 7899999998877776654
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=83.17 E-value=2.4 Score=39.12 Aligned_cols=44 Identities=16% Similarity=0.108 Sum_probs=34.5
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CC-eEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AW-TVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~-~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||=+|+|. |+..+.+|+. |+ +|+++|.+++-++.+++
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 455789999999875 7777777776 66 89999999877776654
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=82.61 E-value=3.1 Score=38.30 Aligned_cols=43 Identities=26% Similarity=0.290 Sum_probs=33.6
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~ 159 (330)
..-.|.+||-+|||. |+..+.+|+. |.+|+++|.+++-++.++
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 209 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK 209 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 345789999999874 7777666664 778999999988777665
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=82.45 E-value=3.3 Score=36.45 Aligned_cols=63 Identities=10% Similarity=0.096 Sum_probs=44.9
Q ss_pred CCCCCeEEEEcCc----cC-HHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 118 DFNGIISLELGAG----TG-LAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 118 ~~~g~~VLELG~G----tG-L~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.++||++|=-|++ .| -++..+|+.|++|+++|.+++.++.+.+-+..-. ..++.+...|-.+.
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~ 70 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-----QPEAHLYQIDVQSD 70 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-----CSSCEEEECCTTCH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CCcEEEEEccCCCH
Confidence 4789999999963 34 3455666779999999999877777766554432 34677777776553
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=82.39 E-value=3.7 Score=37.64 Aligned_cols=43 Identities=19% Similarity=0.219 Sum_probs=33.0
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~ 159 (330)
..-.|.+||-+|+|. |+..+.+|+. |.+|+++|.+++-++.++
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 205 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK 205 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 345689999999973 6666666654 789999999988777665
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=81.19 E-value=3.1 Score=38.42 Aligned_cols=45 Identities=24% Similarity=0.181 Sum_probs=35.4
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCe-EEEEeCchHHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWT-VFLTDHGNYILDNCAKN 161 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~-V~~TD~~~~~L~~~~~N 161 (330)
..-.|.+||=+|||. |+..+.+|+. |++ |+++|.+++-++.+++.
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 445789999999975 7777777776 665 99999999888887753
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=81.08 E-value=3.3 Score=38.48 Aligned_cols=43 Identities=12% Similarity=0.120 Sum_probs=33.6
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CC-eEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AW-TVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~-~V~~TD~~~~~L~~~~ 159 (330)
..-.|.+||=+|||. |+..+.+|+. |. +|+++|.+++-++.++
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 233 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI 233 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 445789999999874 7777777765 66 8999999987777665
|
| >3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* | Back alignment and structure |
|---|
Probab=81.02 E-value=2 Score=39.71 Aligned_cols=108 Identities=17% Similarity=0.165 Sum_probs=60.2
Q ss_pred CCeEEEEcCcc-C-HHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGT-G-LAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~Gt-G-L~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
..+|-=||||+ | -.+..+|..|..|++.|.+++.++.+..++..+-......+.+. ..... ...
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~-------~~~~~-------~~~ 71 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLK-------GSLSA-------EEQ 71 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCC-------SSSCH-------HHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCC-------CccCH-------HHH
Confidence 35788999997 4 34556667799999999999888877766654321000000000 00000 000
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPL 243 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~ 243 (330)
........+..+.....|+|+=| |..+.+.-..+++.|..++++
T Consensus 72 l~~i~~~~~l~~a~~~ad~ViEa-v~E~l~iK~~lf~~l~~~~~~ 115 (319)
T 3ado_A 72 LSLISSCTNLAEAVEGVVHIQEC-VPENLDLKRKIFAQLDSIVDD 115 (319)
T ss_dssp HHTEEEECCHHHHTTTEEEEEEC-CCSCHHHHHHHHHHHHTTCCS
T ss_pred HhhcccccchHhHhccCcEEeec-cccHHHHHHHHHHHHHHHhhh
Confidence 00000111111234578888855 566677778888888888854
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=80.65 E-value=2.5 Score=39.40 Aligned_cols=43 Identities=19% Similarity=0.079 Sum_probs=33.7
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CC-eEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AW-TVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~-~V~~TD~~~~~L~~~~ 159 (330)
..-.|.+||=+|||. |+..+.+|+. |+ +|+++|.+++-++.++
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~ 235 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK 235 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 445789999999974 7777777765 66 8999999987777664
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=80.35 E-value=3.3 Score=38.06 Aligned_cols=43 Identities=19% Similarity=0.186 Sum_probs=32.4
Q ss_pred CCCCCCeEEEEcC--ccCHHHHHHHH-hCCeEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGA--GTGLAGILLSR-VAWTVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~--GtGL~gl~lA~-~~~~V~~TD~~~~~L~~~~ 159 (330)
....|++||-.|+ |.|+..+.+++ .|.+|+++|.+++-++.++
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~ 211 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR 211 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH
Confidence 3457899999998 45766666655 4789999999887666554
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=80.28 E-value=3.6 Score=38.26 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=33.2
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CC-eEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AW-TVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~-~V~~TD~~~~~L~~~~ 159 (330)
..-.|.+||=+|||. |+..+.+|+. |+ +|+++|.+++-++.++
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 237 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK 237 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 345789999999874 7777777765 66 8999999987776664
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=80.13 E-value=2.3 Score=38.49 Aligned_cols=54 Identities=19% Similarity=0.017 Sum_probs=38.0
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
..-|.+.+.. ...-.|.+||=+|+|. |+..+.+|+. |++|++|| +++-++.+++
T Consensus 128 ~~ta~~al~~---~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~ 183 (315)
T 3goh_A 128 LLTAWQAFEK---IPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK 183 (315)
T ss_dssp HHHHHHHHTT---SCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH
T ss_pred HHHHHHHHhh---cCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH
Confidence 3444444432 2455789999999973 7777777765 78999999 8776666653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 330 | |||
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 99.54 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 99.53 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 99.52 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 99.46 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 99.44 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 99.43 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 99.42 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 99.42 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 99.37 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 99.35 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 99.34 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 99.34 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 99.31 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 99.28 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 99.28 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 99.26 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 99.25 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 99.23 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 99.21 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 99.19 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 99.19 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 99.18 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 99.17 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 99.17 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 99.16 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 99.16 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 99.15 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 99.12 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 99.11 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 99.1 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 99.09 | |
| d2g72a1 | 263 | Phenylethanolamine N-methyltransferase, PNMTase {H | 99.06 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 99.05 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 99.05 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 99.04 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 99.03 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 99.03 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 99.02 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 99.02 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 99.0 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 98.99 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 98.97 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 98.96 | |
| d1vlma_ | 208 | Possible histamine N-methyltransferase TM1293 {The | 98.96 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 98.94 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 98.93 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 98.92 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 98.92 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 98.89 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 98.88 | |
| d2h00a1 | 250 | Methyltransferase 10 domain containing protein MET | 98.88 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 98.86 | |
| d2fpoa1 | 183 | Methylase YhhF {Escherichia coli [TaxId: 562]} | 98.84 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 98.83 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 98.83 | |
| d2fhpa1 | 182 | Putative methylase EF2452 {Enterococcus faecalis [ | 98.82 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 98.8 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 98.78 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 98.77 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 98.7 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 98.63 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 98.61 | |
| d2ifta1 | 183 | Putative methylase HI0767 {Haemophilus influenzae | 98.53 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 98.53 | |
| d1yzha1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep | 98.5 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 98.46 | |
| d2cl5a1 | 214 | Catechol O-methyltransferase, COMT {Rat (Rattus no | 98.37 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 98.29 | |
| d2avda1 | 219 | COMT domain-containing protein 1, COMTD1 {Human (H | 98.29 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 98.11 | |
| d2f8la1 | 328 | Hypothetical protein Lmo1582 {Listeria monocytogen | 97.98 | |
| d1jsxa_ | 207 | Glucose-inhibited division protein B (GidB) {Esche | 97.92 | |
| d1qama_ | 235 | rRNA adenine dimethylase {Bacillus subtilis, Ermc' | 97.85 | |
| d1zq9a1 | 278 | Probable dimethyladenosine transferase {Human (Hom | 97.8 | |
| d1fp2a2 | 244 | Isoflavone O-methyltransferase {Alfalfa (Medicago | 97.76 | |
| d1af7a2 | 193 | Chemotaxis receptor methyltransferase CheR, C-term | 97.74 | |
| d1fp1d2 | 244 | Chalcone O-methyltransferase {Alfalfa (Medicago sa | 97.7 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 97.66 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 97.64 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 97.48 | |
| d1yuba_ | 245 | rRNA adenine dimethylase {Streptococcus pneumoniae | 97.42 | |
| d1kyza2 | 243 | Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra | 97.37 | |
| d1xdza_ | 239 | Glucose-inhibited division protein B (GidB) {Bacil | 97.34 | |
| d1qyra_ | 252 | High level kasugamycin resistance protein KsgA {Es | 97.29 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 97.24 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 97.07 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 96.96 | |
| d2ih2a1 | 223 | DNA methylase TaqI, N-terminal domain {Thermus aqu | 96.93 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 96.9 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 96.89 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 96.74 | |
| d2b9ea1 | 293 | NOL1R {Human (Homo sapiens) [TaxId: 9606]} | 96.5 | |
| d2okca1 | 425 | Type I restriction enzyme StySJI M protein {Bacter | 96.36 | |
| d1sqga2 | 284 | Ribosomal RNA small subunit methyltransferase B, R | 95.82 | |
| d2oyra1 | 250 | Hypothetical protein YhiQ {Shigella flexneri [TaxI | 95.16 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 94.77 | |
| d2ar0a1 | 524 | M.EcoKI {Escherichia coli [TaxId: 562]} | 94.67 | |
| d2bm8a1 | 232 | Cephalosporin hydroxylase CmcI {Streptomyces clavu | 94.59 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 94.3 | |
| d1ixka_ | 313 | Hypothetical methyltransferase PH1374 {Archaeon Py | 93.86 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 93.52 | |
| d1i4wa_ | 322 | Transcription factor sc-mtTFB {Baker's yeast (Sacc | 93.42 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 93.4 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 92.71 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 92.6 | |
| d1eg2a_ | 279 | m.RsrI N6 adenosine-specific DNA methyltransferase | 92.35 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 92.23 | |
| d1g60a_ | 256 | Methyltransferase mboII {Moraxella bovis [TaxId: 4 | 92.09 | |
| d1ej0a_ | 180 | RNA methyltransferase FtsJ {Escherichia coli [TaxI | 90.9 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 90.78 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 90.77 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 90.68 | |
| d1booa_ | 320 | m.PvuII N4 cytosine-specific DNA methyltransferase | 90.61 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 90.6 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 90.48 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 90.24 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 90.0 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 89.99 | |
| d1zkda1 | 365 | Hypothetical protein RPA4359 {Rhodopseudomonas pal | 89.9 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 89.9 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 89.72 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 89.62 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 89.37 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 89.3 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 89.24 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 89.15 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 89.04 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 88.85 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 88.06 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 87.72 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 87.66 | |
| d2p41a1 | 257 | An RNA cap (nucleoside-2'-O-)-methyltransferase do | 87.47 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 87.19 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 87.19 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 86.88 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 86.52 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 86.36 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 85.91 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 85.51 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 85.42 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 85.05 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 84.67 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 84.61 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 84.48 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 84.39 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 84.18 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 84.15 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 84.07 | |
| d2py6a1 | 395 | Methyltransferase FkbM {Methylobacillus flagellatu | 83.96 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 83.83 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 82.58 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 82.32 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 82.24 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 82.21 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 82.15 | |
| d2c7pa1 | 327 | DNA methylase HhaI {Haemophilus haemolyticus [TaxI | 80.56 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 80.51 |
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.54 E-value=3.4e-14 Score=122.21 Aligned_cols=119 Identities=17% Similarity=0.183 Sum_probs=94.5
Q ss_pred eechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 98 VWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 98 vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
++.++.+|++.+ ...++++|||+|||+|..++.+|+.+.+|+++|+++.+++.+++|+..|+.. ..++.+
T Consensus 37 ~d~~t~lLi~~l-------~~~~~~~VLDiGcG~G~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~---~~~i~~ 106 (194)
T d1dusa_ 37 VDKGTKILVENV-------VVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLD---NYDIRV 106 (194)
T ss_dssp CCHHHHHHHHHC-------CCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCT---TSCEEE
T ss_pred cCHHHHHHHHhC-------CcCCCCeEEEEeecCChhHHHHHhhccccceeeeccccchhHHHHHHHhCCc---cceEEE
Confidence 455666666654 4467899999999999999999999999999999999999999999998753 346788
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc-cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD-LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~-~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...|+.+.. ....||+|++..++|... ..+.+++.+.++|+++ +.+++.
T Consensus 107 ~~~d~~~~~------------------------~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg--G~l~i~ 156 (194)
T d1dusa_ 107 VHSDLYENV------------------------KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN--GEIWVV 156 (194)
T ss_dssp EECSTTTTC------------------------TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred EEcchhhhh------------------------ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC--cEEEEE
Confidence 888876532 125899999988887644 4688999999999875 445443
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=99.53 E-value=4.7e-14 Score=123.33 Aligned_cols=106 Identities=13% Similarity=0.009 Sum_probs=89.8
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..-++.+|||||||+|..++.+++.+.+|+++|+++.+++.++.++..++ ..++.+...|+.+..-
T Consensus 12 ~l~~~~rVLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-----~~~i~~~~~d~~~l~~--------- 77 (231)
T d1vl5a_ 12 ALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-----HQQVEYVQGDAEQMPF--------- 77 (231)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEECCC-CCCS---------
T ss_pred CCCCcCEEEEecccCcHHHHHHHHhCCEEEEEECCHHHHhhhhhcccccc-----cccccccccccccccc---------
Confidence 44567899999999999999999999999999999999999999998877 4678999988876421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
..++||+|++..++++......+++.+.++|++| +.+++.
T Consensus 78 --------------~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg--G~l~i~ 117 (231)
T d1vl5a_ 78 --------------TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG--GQLLLV 117 (231)
T ss_dssp --------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--EEEEEE
T ss_pred --------------cccccccccccccccccCCHHHHHHHHHHhcCCC--cEEEEE
Confidence 1358999999999999999999999999999876 444443
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.52 E-value=6e-14 Score=123.61 Aligned_cols=114 Identities=10% Similarity=0.028 Sum_probs=94.0
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.++|.... +.-.|.+|||||||||..+..+++.+.+|+++|+++.|++.+++++..++ ..++.+...|..+.
T Consensus 5 ~~~l~~~~---~~~~~~rILDiGcGtG~~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~-----~~~~~~~~~d~~~~ 76 (234)
T d1xxla_ 5 LGLMIKTA---ECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKG-----VENVRFQQGTAESL 76 (234)
T ss_dssp HHHHHHHH---TCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT-----CCSEEEEECBTTBC
T ss_pred HHHHHHHh---CCCCCCEEEEeCCcCcHHHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc-----cccccccccccccc
Confidence 34455543 55678999999999999999999999999999999999999999999887 35688888887653
Q ss_pred CCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 186 WPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.- ..++||+|+++.++++......+++.+.++|+++ +.++++
T Consensus 77 ~~-----------------------~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg--G~~~~~ 118 (234)
T d1xxla_ 77 PF-----------------------PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD--GRFLLV 118 (234)
T ss_dssp CS-----------------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE--EEEEEE
T ss_pred cc-----------------------cccccceeeeeceeecccCHHHHHHHHHHeeCCC--cEEEEE
Confidence 10 1358999999999999888999999999999876 445554
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=99.46 E-value=1.4e-13 Score=123.71 Aligned_cols=130 Identities=15% Similarity=0.154 Sum_probs=93.2
Q ss_pred ceeEEEecccccCCCCcCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHH
Q 020158 78 CFNVTIQHNITSLIPSVGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDN 157 (330)
Q Consensus 78 ~~~i~i~~~~~t~~~~~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~ 157 (330)
...|.|.-+++ .+ ||. =+...++.++|... ..+|++|||+|||+|..++.+++.|.+|+++|+++.+++.
T Consensus 88 ~~~i~i~pg~a--FG-TG~--H~TT~l~l~~l~~~-----~~~g~~VLDiGcGsG~l~i~aa~~g~~V~gvDis~~av~~ 157 (254)
T d2nxca1 88 EIPLVIEPGMA--FG-TGH--HETTRLALKALARH-----LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQ 157 (254)
T ss_dssp SEEEECCCC--------CC--SHHHHHHHHHHHHH-----CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHH
T ss_pred ceEEEEccccc--cC-ccc--cchhhHHHHHHHhh-----cCccCEEEEcccchhHHHHHHHhcCCEEEEEECChHHHHH
Confidence 34555655554 22 232 23566777787665 3578999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHH
Q 020158 158 CAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTL 237 (330)
Q Consensus 158 ~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl 237 (330)
+++|++.|+. ++.+...++.+. ...++||+|+|. +.......++..+
T Consensus 158 A~~na~~n~~------~~~~~~~d~~~~------------------------~~~~~fD~V~an---i~~~~l~~l~~~~ 204 (254)
T d2nxca1 158 AEANAKRNGV------RPRFLEGSLEAA------------------------LPFGPFDLLVAN---LYAELHAALAPRY 204 (254)
T ss_dssp HHHHHHHTTC------CCEEEESCHHHH------------------------GGGCCEEEEEEE---CCHHHHHHHHHHH
T ss_pred HHHHHHHcCC------ceeEEecccccc------------------------ccccccchhhhc---cccccHHHHHHHH
Confidence 9999999974 344555543321 123589999986 2334577889999
Q ss_pred HHhccCCCCeEEEEE
Q 020158 238 KRLMPLGSKKVLYLA 252 (330)
Q Consensus 238 ~~lL~~~~~~~i~va 252 (330)
.++|++| +.++++
T Consensus 205 ~~~LkpG--G~lilS 217 (254)
T d2nxca1 205 REALVPG--GRALLT 217 (254)
T ss_dssp HHHEEEE--EEEEEE
T ss_pred HHhcCCC--cEEEEE
Confidence 9999875 556654
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=99.44 E-value=4.3e-13 Score=118.88 Aligned_cols=121 Identities=12% Similarity=0.009 Sum_probs=98.3
Q ss_pred echHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEE
Q 020158 99 WKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHV 177 (330)
Q Consensus 99 W~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v 177 (330)
++..--..+.|.... ....|.+|||+|||+|..++.+++. +.+|+++|+++.+++.+++|+..++. ..++++
T Consensus 15 ~p~~~~~~~~l~~~~---~l~pg~~VLDiGCG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl----~~~v~~ 87 (245)
T d1nkva_ 15 NPFTEEKYATLGRVL---RMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGV----SERVHF 87 (245)
T ss_dssp SSCCHHHHHHHHHHT---CCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEE
T ss_pred CCCCHHHHHHHHHHc---CCCCCCEEEEEcCCCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhc----cccchh
Confidence 445455555566553 5667999999999999888888875 78999999999999999999998875 467899
Q ss_pred EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 178 RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 178 ~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...|+.+.. ..++||+|++..++++....+.+++.+.++|++|+ .+++.
T Consensus 88 ~~~d~~~~~------------------------~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG--~l~i~ 136 (245)
T d1nkva_ 88 IHNDAAGYV------------------------ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGG--IMLIG 136 (245)
T ss_dssp EESCCTTCC------------------------CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEE--EEEEE
T ss_pred hhhHHhhcc------------------------ccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCc--EEEEE
Confidence 998887642 13579999999999999999999999999998864 44443
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.43 E-value=5.3e-13 Score=115.52 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=78.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++.+|||||||+|..++.+|+.+.+|+++|+++.|++.+++++.... ..+.....|..+...
T Consensus 37 ~~~~ILDiGcG~G~~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~------~~~~~~~~d~~~l~~------------ 98 (226)
T d1ve3a1 37 KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE------SNVEFIVGDARKLSF------------ 98 (226)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCCEEEECCTTSCCS------------
T ss_pred CCCEEEEECCCcchhhhhHhhhhcccccccccccchhhhhhhhcccc------ccccccccccccccc------------
Confidence 55799999999999999999999999999999999999998887654 334555556554311
Q ss_pred cccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCC
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~ 246 (330)
....||+|++.+++++-. ....+++.+.++|++||.
T Consensus 99 -----------~~~~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~ 136 (226)
T d1ve3a1 99 -----------EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGK 136 (226)
T ss_dssp -----------CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEE
T ss_pred -----------cCcCceEEEEecchhhCChhHHHHHHHHHHHHcCcCcE
Confidence 235899999999998854 667799999999988643
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=99.42 E-value=3.1e-13 Score=118.51 Aligned_cols=115 Identities=14% Similarity=0.122 Sum_probs=89.4
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.+|+.+.. ...+++++|||||||+|..+..++..|.+|+++|+++++++.++++. ..++.+...++.+.
T Consensus 8 ~~~~~~~~--~~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~giD~s~~~i~~a~~~~---------~~~~~~~~~~~~~~ 76 (225)
T d2p7ia1 8 HPFMVRAF--TPFFRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRL---------KDGITYIHSRFEDA 76 (225)
T ss_dssp HHHHHHHH--GGGCCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHS---------CSCEEEEESCGGGC
T ss_pred HHHHHHHh--hhhCCCCcEEEEeCCCcHHHHHHHHcCCeEEEEeCcHHHhhhhhccc---------cccccccccccccc
Confidence 35555543 24578899999999999999999999999999999999999998764 24566776665543
Q ss_pred CCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHH-HhccCCCCeEEEEEeeeeC
Q 020158 186 WPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLK-RLMPLGSKKVLYLALEKRY 257 (330)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~-~lL~~~~~~~i~va~~~R~ 257 (330)
. ..++||+|++.+|+++......++..+. ++|+++ +.+++..+.+.
T Consensus 77 ~------------------------~~~~fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~g--G~l~i~~pn~~ 123 (225)
T d2p7ia1 77 Q------------------------LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEG--GRLFLVCPNAN 123 (225)
T ss_dssp C------------------------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEE--EEEEEEEECTT
T ss_pred c------------------------cccccccccccceeEecCCHHHHHHHHHHHhcCCC--ceEEEEeCCcc
Confidence 1 2358999999999999888889888887 789765 66777665443
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=99.42 E-value=1.2e-12 Score=118.48 Aligned_cols=107 Identities=14% Similarity=0.081 Sum_probs=90.1
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..-+|.+|||+|||+|..++.+|+. +.+|+++|+++.+++.++++....+. ..++.+...|+.+..-
T Consensus 64 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl----~~~v~~~~~d~~~l~~-------- 131 (282)
T d2o57a1 64 VLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGL----ADNITVKYGSFLEIPC-------- 131 (282)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTC----TTTEEEEECCTTSCSS--------
T ss_pred CCCCCCEEEEeCCCCcHHHhhhhccCCcEEEEEeccchhhhhhhcccccccc----cccccccccccccccc--------
Confidence 4557899999999999999998876 88999999999999999999888764 4689999999876421
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
..++||+|++.+++++......+++.+.++|++|+ .++++
T Consensus 132 ---------------~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG--~l~~~ 171 (282)
T d2o57a1 132 ---------------EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRG--VMAIT 171 (282)
T ss_dssp ---------------CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEE--EEEEE
T ss_pred ---------------cccccchhhccchhhhccCHHHHHHHHHHhcCCCc--EEEEE
Confidence 13589999999999998899999999999998864 44443
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=99.37 E-value=3.9e-12 Score=109.10 Aligned_cols=99 Identities=14% Similarity=0.113 Sum_probs=82.7
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
...++.+|||||||+|..++.++++|.+|+++|+++.+++.+++++...+ ..++.+...|+.....
T Consensus 27 ~~~~~grvLDiGcG~G~~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~-----~~~~~~~~~d~~~~~~--------- 92 (198)
T d2i6ga1 27 KVVAPGRTLDLGCGNGRNSLYLAANGYDVTAWDKNPASMANLERIKAAEG-----LDNLQTDLVDLNTLTF--------- 92 (198)
T ss_dssp TTSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-----CTTEEEEECCTTTCCC---------
T ss_pred ccCCCCcEEEECCCCCHHHHHHHHHhhhhccccCcHHHHHHHHHHhhhcc-----ccchhhhheecccccc---------
Confidence 34566799999999999999999999999999999999999999998766 3567777777665421
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLG 244 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~ 244 (330)
.+.||+|++..++++. .....+++.+.++|+++
T Consensus 93 ---------------~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg 127 (198)
T d2i6ga1 93 ---------------DGEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPG 127 (198)
T ss_dssp ---------------CCCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEE
T ss_pred ---------------cccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCC
Confidence 2579999999999874 45678999999999875
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.35 E-value=3.3e-12 Score=112.68 Aligned_cols=102 Identities=14% Similarity=0.094 Sum_probs=81.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++++|||+|||||..++.+++.+.+|+++|+++.|++.+++|+..++ .++.+...|+.+..
T Consensus 39 ~~~~~~iLDiGcGtG~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~------~~i~~~~~d~~~l~----------- 101 (251)
T d1wzna1 39 KREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERN------LKIEFLQGDVLEIA----------- 101 (251)
T ss_dssp SSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCCEEEESCGGGCC-----------
T ss_pred CCCCCEEEEeCCCCCccchhhcccceEEEEEeecccccccccccccccc------ccchheehhhhhcc-----------
Confidence 3466899999999999999999999999999999999999999998764 46778887776531
Q ss_pred cccccccCccchhccCCeeEEEEe-ccccCc--ccHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAA-DVIYSD--DLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaa-DviY~~--~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..++||+|+++ .++++. .....+++.+.++|+++ +++++
T Consensus 102 -------------~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg--G~lii 143 (251)
T d1wzna1 102 -------------FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG--GVFIT 143 (251)
T ss_dssp -------------CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE--EEEEE
T ss_pred -------------cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC--cEEEE
Confidence 12479999986 566554 34568899999999876 45544
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=99.34 E-value=2.9e-12 Score=109.20 Aligned_cols=99 Identities=12% Similarity=0.134 Sum_probs=81.2
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
...+|.+|||+|||+|..++.+|+.+.+|+++|.++++++.+++|++.|+. ..++++...|..+..
T Consensus 30 ~~~~g~~VLDiGcGsG~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl----~~~v~~~~gda~~~~---------- 95 (186)
T d1l3ia_ 30 EPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGL----GDNVTLMEGDAPEAL---------- 95 (186)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC----CTTEEEEESCHHHHH----------
T ss_pred CCCCCCEEEEEECCeEcccccccccceEEEEecCCHHHHHHHHHHHHHcCC----CcceEEEECchhhcc----------
Confidence 446889999999999999999999999999999999999999999999885 367888877654321
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
.....||+|++..... ....+++.+.++|++++
T Consensus 96 -------------~~~~~~D~v~~~~~~~---~~~~~~~~~~~~LkpgG 128 (186)
T d1l3ia_ 96 -------------CKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGG 128 (186)
T ss_dssp -------------TTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEE
T ss_pred -------------cccCCcCEEEEeCccc---cchHHHHHHHHHhCcCC
Confidence 1235899999876543 46788999999998764
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=3.2e-12 Score=111.61 Aligned_cols=105 Identities=14% Similarity=0.030 Sum_probs=82.2
Q ss_pred CCCCCeEEEEcCccCHHHHHHH-HhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLS-RVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA-~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
...+.+|||||||+|..+..++ +.+.+|+++|+++.||+.+++++..++ ..++++...|..+...
T Consensus 58 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~-----~~~~~f~~~d~~~~~~--------- 123 (222)
T d2ex4a1 58 KTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-----KRVRNYFCCGLQDFTP--------- 123 (222)
T ss_dssp CCCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-----GGEEEEEECCGGGCCC---------
T ss_pred CCCCCEEEEeccCCCHhhHHHHHhcCCEEEEeecCHHHhhcccccccccc-----cccccccccccccccc---------
Confidence 3456899999999998887765 446799999999999999999987765 3577888877665321
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~~~~i~va 252 (330)
..++||+|++.+++++... ...+++.+.++|+++ +.+++.
T Consensus 124 --------------~~~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~--G~~~i~ 165 (222)
T d2ex4a1 124 --------------EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN--GIIVIK 165 (222)
T ss_dssp --------------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred --------------ccccccccccccccccchhhhhhhHHHHHHHhcCCc--ceEEEE
Confidence 2358999999999988654 357999999999875 445554
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=99.31 E-value=1.6e-12 Score=113.83 Aligned_cols=100 Identities=21% Similarity=0.260 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
..+.+|||+|||+|..+..++..|.+|+++|+++.|++.++.|... . +...+..+..
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~giD~s~~~l~~a~~~~~~---------~--~~~~~~~~l~------------ 97 (246)
T d2avna1 41 KNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVK---------N--VVEAKAEDLP------------ 97 (246)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCS---------C--EEECCTTSCC------------
T ss_pred CCCCEEEEECCCCchhcccccccceEEEEeeccccccccccccccc---------c--cccccccccc------------
Confidence 3678999999999999999999999999999999999999876311 1 1223322210
Q ss_pred ccccccCccchhccCCeeEEEE-eccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 199 QERYSWNSSELKEVQRASVLLA-ADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIla-aDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
. ..++||+|++ .+++++....+.+++.+.++|++| +.++++..
T Consensus 98 ----------~-~~~~fD~ii~~~~~~~~~~d~~~~l~~i~r~Lk~g--G~~ii~~~ 141 (246)
T d2avna1 98 ----------F-PSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPD--GLLIATVD 141 (246)
T ss_dssp ----------S-CTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEE--EEEEEEEE
T ss_pred ----------c-ccccccceeeecchhhhhhhHHHHHHHHHhhcCcC--cEEEEEEC
Confidence 0 1358999998 578888888899999999999875 56666543
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=99.28 E-value=1.4e-11 Score=111.68 Aligned_cols=108 Identities=10% Similarity=0.141 Sum_probs=87.4
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
..|+.... ....++.+|||+|||+|..++.+|.. +.+|+++|+++.+++.+++|+..+. .++.+...|.
T Consensus 15 l~~l~~~~--~~~~~~~~ILDiGcG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~------~~~~f~~~d~ 86 (281)
T d2gh1a1 15 VSFLVNTV--WKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP------YDSEFLEGDA 86 (281)
T ss_dssp HHHHHHTT--SCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSS------SEEEEEESCT
T ss_pred HHHHHHHH--hccCCcCEEEEecCcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccc------cccccccccc
Confidence 45665543 23457889999999999999999875 5789999999999999999997754 4677777776
Q ss_pred CCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 183 MNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
.+.. ..++||+|++..++++......+++.+.+.|++|+
T Consensus 87 ~~~~------------------------~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG 125 (281)
T d2gh1a1 87 TEIE------------------------LNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGG 125 (281)
T ss_dssp TTCC------------------------CSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEE
T ss_pred cccc------------------------ccCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCc
Confidence 5431 12479999999999999899999999999998763
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=99.28 E-value=5e-12 Score=104.50 Aligned_cols=111 Identities=16% Similarity=0.141 Sum_probs=85.8
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..++|++|||||||||..|+.++.+| ++|++.|.++.+++.+++|++.|+. ..++.+...|+....
T Consensus 11 ~~~~g~~vlDl~~GtG~~~iea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~----~~~~~ii~~D~~~~l--------- 77 (152)
T d2esra1 11 PYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKA----ENRFTLLKMEAERAI--------- 77 (152)
T ss_dssp SCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTC----GGGEEEECSCHHHHH---------
T ss_pred hhCCCCeEEEcCCccCHHHHHHHHhCcceeeeehhchhhhhhhhhhhhhccc----ccchhhhcccccccc---------
Confidence 45899999999999999999888885 6999999999999999999999875 467888887755421
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHH--hccCCCCeEEEEEeeee
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKR--LMPLGSKKVLYLALEKR 256 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~--lL~~~~~~~i~va~~~R 256 (330)
.....+||+|++ |.=|........+..|.. +|++ ++.+++...++
T Consensus 78 -------------~~~~~~fDiIf~-DPPy~~~~~~~~l~~i~~~~~L~~--~g~iiiE~~~~ 124 (152)
T d2esra1 78 -------------DCLTGRFDLVFL-DPPYAKETIVATIEALAAKNLLSE--QVMVVCETDKT 124 (152)
T ss_dssp -------------HHBCSCEEEEEE-CCSSHHHHHHHHHHHHHHTTCEEE--EEEEEEEEETT
T ss_pred -------------cccccccceeEe-chhhccchHHHHHHHHHHCCCcCC--CeEEEEEeCCC
Confidence 012468999988 777877777888887764 3543 56677654433
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.26 E-value=8.9e-12 Score=110.09 Aligned_cols=102 Identities=14% Similarity=0.079 Sum_probs=80.5
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
...+++|||+|||+|..++.+++.|.+|+++|.++.||+.+++++..++ .++++...|+.+..
T Consensus 35 ~~~~~~vLDiGCG~G~~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~------~~v~~~~~d~~~~~----------- 97 (246)
T d1y8ca_ 35 NLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQG------LKPRLACQDISNLN----------- 97 (246)
T ss_dssp TCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTT------CCCEEECCCGGGCC-----------
T ss_pred CCCCCeEEEEeCcCCHHHHHHHHhCCccEeeccchhhhhhccccccccC------ccceeeccchhhhc-----------
Confidence 3567899999999999999999999999999999999999999987765 35777777765431
Q ss_pred cccccccCccchhccCCeeEEEEe-ccccC---cccHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAA-DVIYS---DDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaa-DviY~---~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..++||+|++. .++++ ......+++.+.++|+++ +.+++
T Consensus 98 -------------~~~~fD~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~~i~ 140 (246)
T d1y8ca_ 98 -------------INRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG--GVFIF 140 (246)
T ss_dssp -------------CSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE--EEEEE
T ss_pred -------------ccccccccceeeeeeeccCCHHHHHHHHHHHHHhCCCC--eEEEE
Confidence 13579999985 55544 446667899999999876 44444
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=99.25 E-value=6.8e-11 Score=103.06 Aligned_cols=104 Identities=15% Similarity=0.146 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh----CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV----AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~----~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
-++.+|||||||||..++.+++. +.+|++.|.++.|++.+++++..+.. ..++.+...|..+.
T Consensus 38 ~~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~----~~~~~~~~~d~~~~--------- 104 (225)
T d1im8a_ 38 TADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHS----EIPVEILCNDIRHV--------- 104 (225)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCC----SSCEEEECSCTTTC---------
T ss_pred CCCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcc----cchhhhccchhhcc---------
Confidence 45679999999999999999874 57999999999999999999986553 34566555443322
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
....+|+|+++-++++. +....+++.+.+.|+++ +.++++.
T Consensus 105 ----------------~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg--G~li~~~ 147 (225)
T d1im8a_ 105 ----------------EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPN--GVLVLSE 147 (225)
T ss_dssp ----------------CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE--EEEEEEE
T ss_pred ----------------ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCC--ceeeccc
Confidence 12478999999999875 46779999999999875 5555543
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=99.23 E-value=8.1e-11 Score=105.08 Aligned_cols=103 Identities=10% Similarity=0.002 Sum_probs=77.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHH-HhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLS-RVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA-~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
...+.+|||+|||+|.++..++ +.+.+|+++|.++.|++.++++... ..++++...+..+...
T Consensus 91 ~~~~~~vLD~GcG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~-------~~~~~~~~~d~~~~~~--------- 154 (254)
T d1xtpa_ 91 GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG-------MPVGKFILASMETATL--------- 154 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT-------SSEEEEEESCGGGCCC---------
T ss_pred CCCCCeEEEecccCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccc-------cccceeEEcccccccc---------
Confidence 3467899999999998887665 4567999999999999999877642 2456776666544311
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCccc--HHHHHHHHHHhccCCCCeEEEEE
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDL--TDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+||+|++..|+++-.. ...+++.+.++|+++ +.+++.
T Consensus 155 --------------~~~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg--G~iii~ 196 (254)
T d1xtpa_ 155 --------------PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN--GYIFFK 196 (254)
T ss_dssp --------------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred --------------CCCccceEEeeccccccchhhhHHHHHHHHHhcCCC--cEEEEE
Confidence 1358999999999998654 457899999999775 455553
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=99.21 E-value=6.3e-11 Score=105.21 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=82.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
-++++|||||||+|.....+++.+ .+|+++|+++.||+.++.++..++. ..++.+...|......
T Consensus 23 ~~~~~VLDlGCG~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~----~~~v~f~~~D~~~~~~---------- 88 (252)
T d1ri5a_ 23 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR----RFKVFFRAQDSYGRHM---------- 88 (252)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCC----SSEEEEEESCTTTSCC----------
T ss_pred CCcCEEEEecccCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCC----CcceEEEEcchhhhcc----------
Confidence 467899999999998777888876 5899999999999999988876553 4578888888654311
Q ss_pred cccccccCccchhccCCeeEEEEeccccCc----ccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSD----DLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~----~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...+.||+|++..++++- .....+++.+.++|++| +.+++.
T Consensus 89 ------------~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g--G~~i~~ 133 (252)
T d1ri5a_ 89 ------------DLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPG--GYFIMT 133 (252)
T ss_dssp ------------CCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE--EEEEEE
T ss_pred ------------cccccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCC--CEEEEE
Confidence 123579999999999763 45678999999999876 455554
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.19 E-value=4.7e-11 Score=109.87 Aligned_cols=101 Identities=14% Similarity=0.244 Sum_probs=80.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..++|++|||||||+|+.++.+|+.| ++|+++|.++. ...+++++..|+. ..++.+...+..+...
T Consensus 30 ~~~~~~~VLDiGcG~G~ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~----~~~v~~~~~~~~~~~~-------- 96 (316)
T d1oria_ 30 HLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKL----DHVVTIIKGKVEEVEL-------- 96 (316)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTC----TTTEEEEESCTTTCCC--------
T ss_pred ccCCcCEEEEEecCCcHHHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCC----ccccceEeccHHHccc--------
Confidence 45789999999999999999999996 58999999964 5777888988875 4678888877665421
Q ss_pred CccccccccCccchhccCCeeEEEEec---cccCcccHHHHHHHHHHhccCCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAAD---VIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaD---viY~~~~~~~l~~tl~~lL~~~~ 245 (330)
...++|+|++.- .+++....+.++..+.++|++++
T Consensus 97 ---------------~~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G 134 (316)
T d1oria_ 97 ---------------PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDG 134 (316)
T ss_dssp ---------------SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEE
T ss_pred ---------------ccceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCe
Confidence 135899998743 34556789999999999998763
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.19 E-value=1.4e-10 Score=105.13 Aligned_cols=114 Identities=15% Similarity=0.167 Sum_probs=90.0
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
|..-.-+.+++.. ..-+|.+|||+|||+|-.++.+++. |.+|++.|+++..++.+++.+...+. ...+.+..
T Consensus 36 AQ~~k~~~~~~~l---~l~~g~~VLDiGCG~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l----~~~~~~~~ 108 (280)
T d2fk8a1 36 AQYAKVDLNLDKL---DLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDT----NRSRQVLL 108 (280)
T ss_dssp HHHHHHHHHHTTS---CCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCC----SSCEEEEE
T ss_pred HHHHHHHHHHHHc---CCCCCCEEEEecCCchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhcc----ccchhhhh
Confidence 3344556666653 5567999999999999999888876 89999999999999999999887664 35566665
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCCe
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSKK 247 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~~ 247 (330)
.|+.+. ..+||.|++.+++.+. ...+.+++.+.++|+|+|..
T Consensus 109 ~d~~~~--------------------------~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~ 152 (280)
T d2fk8a1 109 QGWEDF--------------------------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRM 152 (280)
T ss_dssp SCGGGC--------------------------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhh--------------------------ccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceE
Confidence 554432 2589999999999886 46689999999999887543
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.18 E-value=7.3e-11 Score=109.08 Aligned_cols=101 Identities=15% Similarity=0.263 Sum_probs=81.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..++|++|||||||+|++++.+|+.| ++|++.|.++ ++..+++++..|+. ..++.+...+..+...
T Consensus 35 ~~~~~~~VLDlGcGtG~ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~----~~~i~~i~~~~~~l~~-------- 101 (328)
T d1g6q1_ 35 DLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGF----SDKITLLRGKLEDVHL-------- 101 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTC----TTTEEEEESCTTTSCC--------
T ss_pred ccCCcCEEEEeCCCCCHHHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCc----cccceEEEeehhhccC--------
Confidence 34689999999999999999999996 5899999985 77889999988875 4678888877665311
Q ss_pred CccccccccCccchhccCCeeEEEEecc---ccCcccHHHHHHHHHHhccCCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADV---IYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDv---iY~~~~~~~l~~tl~~lL~~~~ 245 (330)
...++|+|++.-+ +.+....+.++..+.++|++++
T Consensus 102 ---------------~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG 139 (328)
T d1g6q1_ 102 ---------------PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGG 139 (328)
T ss_dssp ---------------SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEE
T ss_pred ---------------cccceeEEEEEecceeeccchhHHHHHHHHHhccCCCe
Confidence 1358999998544 4456788999999999998863
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=99.17 E-value=2.6e-11 Score=102.15 Aligned_cols=121 Identities=18% Similarity=0.112 Sum_probs=82.1
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWM 183 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~ 183 (330)
.|.++|.++ ..+|.+|||+|||+|..|+.++.+|++|++.|.++.+++.+++|++.|+. ..++ ...+..
T Consensus 30 ~lf~~l~~~-----~~~g~~vLDl~~G~G~~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~----~~~v--~~~~~d 98 (171)
T d1ws6a1 30 ALFDYLRLR-----YPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGL----GARV--VALPVE 98 (171)
T ss_dssp HHHHHHHHH-----CTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTC----CCEE--ECSCHH
T ss_pred HHHHHhhcc-----ccCCCeEEEeccccchhhhhhhhccchhhhcccCHHHHhhhhHHHHhhcc----ccce--eeeehh
Confidence 445566543 35788999999999999999999999999999999999999999999874 2333 222211
Q ss_pred CCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHH-hccCCCCeEEEEEeeeeC
Q 020158 184 NPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKR-LMPLGSKKVLYLALEKRY 257 (330)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~-lL~~~~~~~i~va~~~R~ 257 (330)
.. .+ .......+||+|++ |.=|..+..+.+...+.. +|++ ++++++.+.+..
T Consensus 99 ~~-----------------~~--~~~~~~~~fD~If~-DPPY~~~~~~~l~~l~~~~ll~~--~g~ivie~~~~~ 151 (171)
T d1ws6a1 99 VF-----------------LP--EAKAQGERFTVAFM-APPYAMDLAALFGELLASGLVEA--GGLYVLQHPKDL 151 (171)
T ss_dssp HH-----------------HH--HHHHTTCCEEEEEE-CCCTTSCTTHHHHHHHHHTCEEE--EEEEEEEEETTS
T ss_pred cc-----------------cc--cccccCCccceeEE-ccccccCHHHHHHHHHHcCCcCC--CeEEEEEecCCC
Confidence 10 00 00112358999986 666776666666666543 5544 466666554443
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=99.17 E-value=3.2e-11 Score=101.53 Aligned_cols=112 Identities=11% Similarity=0.079 Sum_probs=80.3
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCC-------CCCeeEEEEecCCCCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFS-------HQGSVHVRDLNWMNPWPPI 189 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~-------~~~~v~v~~ldW~~~~~~~ 189 (330)
...+|.+|||+|||+|-.++.+|+.|.+|++.|+++.|++.++.++........ ....+.+...|+.+..
T Consensus 17 ~~~~~~rvLd~GCG~G~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--- 93 (201)
T d1pjza_ 17 NVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT--- 93 (201)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST---
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccc---
Confidence 456889999999999999999999999999999999999999988843221000 0122334444443321
Q ss_pred ccCCCCCccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 190 FSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 190 ~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
......||+|+++.+++... ....+++.+.++|+++ +.+++.
T Consensus 94 -------------------~~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg--G~l~l~ 137 (201)
T d1pjza_ 94 -------------------ARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA--CSGLLI 137 (201)
T ss_dssp -------------------HHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE--EEEEEE
T ss_pred -------------------cccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC--cEEEEE
Confidence 11235799999999988753 5678999999999876 444443
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.16 E-value=2.6e-11 Score=110.04 Aligned_cols=111 Identities=13% Similarity=0.168 Sum_probs=80.1
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
.+++|||||||+|..++.+|+.|.+|++.|+++.||+.+++|...+..... .....+...+|....
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------- 121 (292)
T d1xvaa_ 56 GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPA-FDKWVIEEANWLTLD------------- 121 (292)
T ss_dssp TCCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHH-HHTCEEEECCGGGHH-------------
T ss_pred CCCEEEEecCCCcHHHHHHHHcCCeeeeccCchHHHHHHHHHHHhcccccc-cceeeeeeccccccc-------------
Confidence 467999999999999999999999999999999999999999877653211 123445566664321
Q ss_pred cccccCccchhccCCeeEEEEe-ccccCc-------ccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 200 ERYSWNSSELKEVQRASVLLAA-DVIYSD-------DLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaa-DviY~~-------~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
........||+|++. +++.+- .....+++.+.++|++| +++++..
T Consensus 122 -------~~~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg--G~li~~~ 174 (292)
T d1xvaa_ 122 -------KDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG--GLLVIDH 174 (292)
T ss_dssp -------HHSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE--EEEEEEE
T ss_pred -------cccCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC--cEEEEee
Confidence 011123579999975 455442 24667999999999875 4566644
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=1.2e-10 Score=106.71 Aligned_cols=100 Identities=14% Similarity=0.274 Sum_probs=76.3
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..++|++|||||||+|+.++.+|+.| ++|+++|.++.++. +++++..|+. ..++.+...+-.+...
T Consensus 32 ~~~~~~~VLDiGcG~G~lsl~aa~~Ga~~V~aid~s~~~~~-a~~~~~~~~~----~~~i~~~~~~~~~l~~-------- 98 (311)
T d2fyta1 32 HIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQ-AMDIIRLNKL----EDTITLIKGKIEEVHL-------- 98 (311)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHH-HHHHHHHTTC----TTTEEEEESCTTTSCC--------
T ss_pred ccCCcCEEEEECCCCCHHHHHHHHcCCCEEEEEeCHHHHHH-HHHHHHHhCC----CccceEEEeeHHHhcC--------
Confidence 56899999999999999999999997 58999999987764 5556666654 4678888776555311
Q ss_pred CccccccccCccchhccCCeeEEEEeccc---cCcccHHHHHHHHHHhccCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVI---YSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDvi---Y~~~~~~~l~~tl~~lL~~~ 244 (330)
...+||+|++.-+. ......+.++....++|+++
T Consensus 99 ---------------~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~ 135 (311)
T d2fyta1 99 ---------------PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKG 135 (311)
T ss_dssp ---------------SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEE
T ss_pred ---------------ccccceEEEEeeeeeecccccccHHHHHHHHhcCCCC
Confidence 13589999974322 33567888999999999876
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.15 E-value=4.2e-10 Score=99.04 Aligned_cols=133 Identities=14% Similarity=0.107 Sum_probs=93.6
Q ss_pred cCeEeechHH-HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCC
Q 020158 94 VGLQVWKAEL-VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFS 170 (330)
Q Consensus 94 ~G~~vW~aa~-~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~ 170 (330)
...++|+.-. -||.-|......-..-+|.+|||||||+|.+...+|..+ ..|++.|+++.|++.++.++..+
T Consensus 47 ~e~r~w~p~rsklaA~i~~gl~~l~ikpG~~VLDlGcGsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~----- 121 (230)
T d1g8sa_ 47 EEYRIWNPNKSKLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER----- 121 (230)
T ss_dssp EEEEECCTTTCHHHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-----
T ss_pred ceeeeECCCccHHHHHHHhhHHhCCCCCCCEEEEeCEEcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhh-----
Confidence 4689998744 445444443211234578999999999999999999874 68999999999999998876543
Q ss_pred CCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEE
Q 020158 171 HQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLY 250 (330)
Q Consensus 171 ~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~ 250 (330)
.++.....+...... . ....+|+++....+++....+.+++.+.++|+++ +.++
T Consensus 122 --~ni~~i~~d~~~~~~---------------------~-~~~~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg--G~~~ 175 (230)
T d1g8sa_ 122 --ENIIPILGDANKPQE---------------------Y-ANIVEKVDVIYEDVAQPNQAEILIKNAKWFLKKG--GYGM 175 (230)
T ss_dssp --TTEEEEECCTTCGGG---------------------G-TTTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEE--EEEE
T ss_pred --cccceEEEeeccCcc---------------------c-ccccceeEEeeccccchHHHHHHHHHHHHhcccC--ceEE
Confidence 345555555444311 0 1235677666667888888999999999999876 4566
Q ss_pred EEeeeeC
Q 020158 251 LALEKRY 257 (330)
Q Consensus 251 va~~~R~ 257 (330)
++...|.
T Consensus 176 i~~k~~~ 182 (230)
T d1g8sa_ 176 IAIKARS 182 (230)
T ss_dssp EEEEGGG
T ss_pred EEeeccc
Confidence 6655554
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.12 E-value=7.2e-10 Score=100.57 Aligned_cols=117 Identities=17% Similarity=0.182 Sum_probs=96.6
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEE
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVR 178 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~ 178 (330)
.|..-+.+++.+.. ..-+|.+|||||||.|-+++.+|+. |.+|++.++++.-++.+++.+...+. ..++.+.
T Consensus 45 eAQ~~k~~~~~~~l---~l~~G~~VLDiGCG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~----~~~v~~~ 117 (285)
T d1kpga_ 45 EAQIAKIDLALGKL---GLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSEN----LRSKRVL 117 (285)
T ss_dssp HHHHHHHHHHHTTT---TCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCC----CSCEEEE
T ss_pred HHHHHHHHHHHHHc---CCCCCCEEEEecCcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhh----hhhhHHH
Confidence 46667778888774 5678999999999999999976665 89999999999999999999887664 4788888
Q ss_pred EecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCCeEE
Q 020158 179 DLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSKKVL 249 (330)
Q Consensus 179 ~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~~~i 249 (330)
..||.+. ..+||-|++-..+.+. ...+.+++.+.++|++++..++
T Consensus 118 ~~d~~~~--------------------------~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l 164 (285)
T d1kpga_ 118 LAGWEQF--------------------------DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 164 (285)
T ss_dssp ESCGGGC--------------------------CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred Hhhhhcc--------------------------cccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEE
Confidence 8887653 2479999999999886 4568999999999988765443
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=7.1e-11 Score=104.29 Aligned_cols=118 Identities=17% Similarity=0.168 Sum_probs=77.0
Q ss_pred CCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCC----------C-----------
Q 020158 116 SSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQ----------G----------- 173 (330)
Q Consensus 116 ~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~----------~----------- 173 (330)
+...+|++|||||||+|..++.++.. +.+|+++|+++.+++.+++++..+....... +
T Consensus 47 ~~~~~g~~vLDlGcG~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (257)
T d2a14a1 47 PGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 126 (257)
T ss_dssp TTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred ccCCCCCEEEEECCCCCHhHHHHhccccCcEEEecCCHHHHHHHHHHHhhccccchhhhHHHHHHHhccccchHHHHHHH
Confidence 35568899999999999888777765 4589999999999999999997765322100 0
Q ss_pred -eeEE-EEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc----ccHHHHHHHHHHhccCCCCe
Q 020158 174 -SVHV-RDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD----DLTDALFHTLKRLMPLGSKK 247 (330)
Q Consensus 174 -~v~v-~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~----~~~~~l~~tl~~lL~~~~~~ 247 (330)
...+ ............ ........||+|++..++.+. +....+++.+.++|++| +
T Consensus 127 ~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~fD~i~~~~~l~~~~~~~~~~~~~l~~i~~~LkpG--G 187 (257)
T d2a14a1 127 LRAAVKRVLKCDVHLGNP-----------------LAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPG--G 187 (257)
T ss_dssp HHHHEEEEEECCTTSSST-----------------TTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEE--E
T ss_pred Hhhhhhcccccccccccc-----------------cccccCCcccEEeehhhHHHhcccHHHHHHHHHHHHhccCCC--c
Confidence 0000 001111000000 001124589999999998764 46678999999999876 4
Q ss_pred EEEEE
Q 020158 248 VLYLA 252 (330)
Q Consensus 248 ~i~va 252 (330)
.++++
T Consensus 188 ~li~~ 192 (257)
T d2a14a1 188 HLVTT 192 (257)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44444
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=99.10 E-value=3.4e-10 Score=102.11 Aligned_cols=116 Identities=15% Similarity=0.221 Sum_probs=86.6
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVR 178 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~ 178 (330)
-+..|.++.+... .-++.+|||||||+|..|+.+|.. ..+|+++|+++.+++.+++|++.|+. .++.+.
T Consensus 93 eTE~lv~~~l~~~----~~~~~~vlDlGtGSG~I~i~la~~~p~~~v~avDis~~Al~~A~~Na~~~~~-----~~v~~~ 163 (274)
T d2b3ta1 93 DTECLVEQALARL----PEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI-----KNIHIL 163 (274)
T ss_dssp THHHHHHHHHHHS----CSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC-----CSEEEE
T ss_pred chhhhhhhHhhhh----cccccceeeeehhhhHHHHHHHhhCCcceeeeccchhHHHhHHHHHHHHhCc-----ccceee
Confidence 4556677766652 245678999999999999999887 47999999999999999999999983 568999
Q ss_pred EecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc-------------------------cHHHH
Q 020158 179 DLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD-------------------------LTDAL 233 (330)
Q Consensus 179 ~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~-------------------------~~~~l 233 (330)
.-||.+..+ ..+||+|+++-..+... .+..+
T Consensus 164 ~~d~~~~~~------------------------~~~fDlIvsNPPYi~~~~~~~~~~v~~~eP~~AL~~g~dGl~~~~~i 219 (274)
T d2b3ta1 164 QSDWFSALA------------------------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHI 219 (274)
T ss_dssp CCSTTGGGT------------------------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHH
T ss_pred ecccccccC------------------------CCceeEEEecchhhhhhhhcccccccccchhhhcccccccchHHHHH
Confidence 999876421 24899999975543221 34556
Q ss_pred HHHHHHhccCCCCeEEEE
Q 020158 234 FHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 234 ~~tl~~lL~~~~~~~i~v 251 (330)
+....++|+++ +.+++
T Consensus 220 ~~~a~~~L~~~--G~l~l 235 (274)
T d2b3ta1 220 IEQSRNALVSG--GFLLL 235 (274)
T ss_dssp HHHHGGGEEEE--EEEEE
T ss_pred HHHHHHhcCCC--CEEEE
Confidence 77777777654 45555
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.09 E-value=7.6e-10 Score=100.72 Aligned_cols=115 Identities=13% Similarity=0.103 Sum_probs=91.6
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHH-hCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEE
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSR-VAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRD 179 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~-~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ 179 (330)
|-.-+.+++++.. ..-+|.+|||||||.|-+++.+|. .|.+|++.++++..++.++..+...+. ...+.+..
T Consensus 45 Aq~~k~~~~~~~l---~l~~G~~VLDiGCG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l----~~~v~~~~ 117 (291)
T d1kpia_ 45 AQYAKRKLALDKL---NLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDS----PRRKEVRI 117 (291)
T ss_dssp HHHHHHHHHHHTT---CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCC----SSCEEEEE
T ss_pred HHHHHHHHHHHhc---CCCCCCEEEEecCcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhcc----chhhhhhh
Confidence 4556677777764 667899999999999999987775 589999999999999999988887664 46677776
Q ss_pred ecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcc---------cHHHHHHHHHHhccCCCCeE
Q 020158 180 LNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD---------LTDALFHTLKRLMPLGSKKV 248 (330)
Q Consensus 180 ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~---------~~~~l~~tl~~lL~~~~~~~ 248 (330)
.|+... .++||.|++-..+.+.. ..+.+++.+.++|+|++...
T Consensus 118 ~d~~~~--------------------------~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~ 169 (291)
T d1kpia_ 118 QGWEEF--------------------------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRML 169 (291)
T ss_dssp CCGGGC--------------------------CCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEE
T ss_pred hccccc--------------------------ccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceE
Confidence 665321 25799999999997743 47899999999998875443
|
| >d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Phenylethanolamine N-methyltransferase, PNMTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=4.6e-10 Score=100.38 Aligned_cols=124 Identities=15% Similarity=0.142 Sum_probs=78.1
Q ss_pred CCCCCCCeEEEEcCccCHHHHH-HHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCC-----------------------
Q 020158 116 SSDFNGIISLELGAGTGLAGIL-LSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSH----------------------- 171 (330)
Q Consensus 116 ~~~~~g~~VLELG~GtGL~gl~-lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~----------------------- 171 (330)
+...+|.+|||+|||+|+.++. +++.+.+|+++|+++.|++.+++++.........
T Consensus 50 ~g~~~g~~vLDiGcG~g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T d2g72a1 50 TGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQ 129 (263)
T ss_dssp TSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred CCCCCCcEEEEeccCCCHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHhcCcccccchhhhhhhhhhccccchhhhhHHH
Confidence 3668899999999999977754 4455789999999999999999887543321110
Q ss_pred --CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc----ccHHHHHHHHHHhccCCC
Q 020158 172 --QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD----DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 172 --~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~----~~~~~l~~tl~~lL~~~~ 245 (330)
.....+...|-....+.. ........||+|+++-|+.+. +....+++.+.++|+||
T Consensus 130 ~~~~~~~~~~~Dv~~~~~~~-----------------~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~~~~~LkPG- 191 (263)
T d2g72a1 130 LRARVKRVLPIDVHQPQPLG-----------------AGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPG- 191 (263)
T ss_dssp HHHHEEEEECCCTTSSSTTC-----------------SSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEE-
T ss_pred hhhhhhccccccccCCCccc-----------------cCCcCcCccCeeeeHHHHHHHccCHHHHHHHHHHHHHHcCCC-
Confidence 000111111211111000 000123479999999988653 35778889999999876
Q ss_pred CeEEEEEeeeeCc
Q 020158 246 KKVLYLALEKRYN 258 (330)
Q Consensus 246 ~~~i~va~~~R~~ 258 (330)
+.+++....+..
T Consensus 192 -G~li~~~~~~~~ 203 (263)
T d2g72a1 192 -GHLLLIGALEES 203 (263)
T ss_dssp -EEEEEEEEESCC
T ss_pred -CEEEEecccCCc
Confidence 455555444444
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.05 E-value=2.3e-10 Score=98.63 Aligned_cols=59 Identities=22% Similarity=0.214 Sum_probs=50.8
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
..++|++|||||||||..|+.++..| .+|+++|+++.+++.+++|+..++ ....+...|
T Consensus 43 ~dl~g~~vLDlg~GtG~l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~------~~~~~~~~d 102 (201)
T d1wy7a1 43 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFK------GKFKVFIGD 102 (201)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGT------TSEEEEESC
T ss_pred CCCCCCEEEECcCcchHHHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcC------CCceEEECc
Confidence 67899999999999999999998887 589999999999999999998775 345555544
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=2.1e-10 Score=100.41 Aligned_cols=119 Identities=7% Similarity=0.017 Sum_probs=86.1
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCC-----CC------
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGV-----FS------ 170 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~-----~~------ 170 (330)
...|.+|+.+.. ...++.+|||+|||+|..++.+|+.|.+|++.|+++.+++.++.+....... ..
T Consensus 30 ~~~l~~~~~~~l---~~~~~~rvLd~GCG~G~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~ 106 (229)
T d2bzga1 30 HQLLKKHLDTFL---KGKSGLRVFFPLCGKAVEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFK 106 (229)
T ss_dssp CHHHHHHHHHHH---TTCCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEE
T ss_pred CHHHHHHHHHhc---CCCCCCEEEEeCCCCcHHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceee
Confidence 456677776543 3457889999999999999999999999999999999999888776432110 00
Q ss_pred -CCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCC
Q 020158 171 -HQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 171 -~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~ 245 (330)
...++.+...|+.+.. ......||+|+..-+++.. +.....++.+.++|++++
T Consensus 107 ~~~~~v~~~~~d~~~l~----------------------~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG 162 (229)
T d2bzga1 107 SSSGNISLYCCSIFDLP----------------------RTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKF 162 (229)
T ss_dssp ETTSSEEEEESCGGGGG----------------------GSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEE
T ss_pred ecCCcEEEEEcchhhcc----------------------ccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcc
Confidence 0234455555443321 1123589999999888764 677899999999998863
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=7e-11 Score=103.69 Aligned_cols=100 Identities=14% Similarity=0.134 Sum_probs=75.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
-.|++|||+|||+|..+..+++. +.+|+++|+++.+++.++++..... ..+.+...++......
T Consensus 52 ~~g~~VLdIGcG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~------~~~~~~~~~~~~~~~~--------- 116 (229)
T d1zx0a1 52 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT------HKVIPLKGLWEDVAPT--------- 116 (229)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS------SEEEEEESCHHHHGGG---------
T ss_pred cCCCeEEEeeccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcc------cccccccccccccccc---------
Confidence 46789999999999999999987 4789999999999999999876543 4566666555432100
Q ss_pred cccccccCccchhccCCeeEEE-----EeccccCcccHHHHHHHHHHhccCCC
Q 020158 198 SQERYSWNSSELKEVQRASVLL-----AADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIl-----aaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
+ ...+||.|+ +...+++....+.+++.+.++|++|+
T Consensus 117 -----------~-~~~~fD~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG 157 (229)
T d1zx0a1 117 -----------L-PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGG 157 (229)
T ss_dssp -----------S-CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEE
T ss_pred -----------c-ccccccceeecccccccccccccCHHHHHHHHHHHcCCCc
Confidence 0 235788876 45555666677889999999998763
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=99.03 E-value=3.2e-10 Score=104.47 Aligned_cols=102 Identities=20% Similarity=0.178 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.+|++||||+||+|..++.+|+.+++|+++|.++.+++.+++|+.+|+. .++++...|..+..
T Consensus 144 ~~g~rVLDl~~gtG~~s~~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl-----~~~~~i~~d~~~~~------------ 206 (318)
T d1wxxa2 144 FRGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGL-----GNVRVLEANAFDLL------------ 206 (318)
T ss_dssp CCEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTC-----TTEEEEESCHHHHH------------
T ss_pred hCCCeeeccCCCCcHHHHHHHhcCCcEEeecchHHHHHHHHHHHHHcCC-----CCcceeeccHHHHh------------
Confidence 5799999999999999999998889999999999999999999999984 56777777654321
Q ss_pred ccccccCccchhccCCeeEEEEeccccCc---------ccHHHHHHHHHHhccCC
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSD---------DLTDALFHTLKRLMPLG 244 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~---------~~~~~l~~tl~~lL~~~ 244 (330)
........+||+|++--..+.. ..+..++....++|++|
T Consensus 207 -------~~~~~~~~~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG 254 (318)
T d1wxxa2 207 -------RRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG 254 (318)
T ss_dssp -------HHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE
T ss_pred -------hhhHhhhcCCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 0011234689999975443331 13446777888888775
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.03 E-value=2.1e-10 Score=98.70 Aligned_cols=46 Identities=15% Similarity=0.212 Sum_probs=42.6
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHH
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNV 162 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv 162 (330)
..+.|++|||||||+|..|+.++.+| .+|+++|+++.+++.+++|+
T Consensus 45 ~dl~Gk~VLDlGcGtG~l~i~a~~~ga~~V~~vDid~~a~~~ar~N~ 91 (197)
T d1ne2a_ 45 GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNC 91 (197)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHC
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHcCCCcccccccCHHHHHHHHHcc
Confidence 56899999999999999999999986 68999999999999999986
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=99.02 E-value=6.5e-10 Score=98.98 Aligned_cols=101 Identities=18% Similarity=0.143 Sum_probs=78.7
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
...+|.+|||+|||+|..++.+|+. ..+|+++|.++++++.+++|+..+.. ..++.+...|..+..
T Consensus 82 ~i~pG~rVLEiG~GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~----~~nv~~~~~Di~~~~------- 150 (250)
T d1yb2a1 82 GLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD----IGNVRTSRSDIADFI------- 150 (250)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC----CTTEEEECSCTTTCC-------
T ss_pred CCCCcCEEEEeeeeCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcC----CCceEEEEeeeeccc-------
Confidence 5678999999999999999999986 35899999999999999999988654 467888888766542
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLY 250 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~ 250 (330)
....||.|+. | ......+++.+.++|++|+..++|
T Consensus 151 -----------------~~~~fD~V~l-d----~p~p~~~l~~~~~~LKpGG~lv~~ 185 (250)
T d1yb2a1 151 -----------------SDQMYDAVIA-D----IPDPWNHVQKIASMMKPGSVATFY 185 (250)
T ss_dssp -----------------CSCCEEEEEE-C----CSCGGGSHHHHHHTEEEEEEEEEE
T ss_pred -----------------ccceeeeeee-c----CCchHHHHHHHHHhcCCCceEEEE
Confidence 1247999875 2 344556788899999886543333
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=99.02 E-value=1.1e-09 Score=97.13 Aligned_cols=100 Identities=13% Similarity=0.159 Sum_probs=79.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++|||+|||+|..++.+++. ..++++.|+ +++++.+++++...+. ..++.+...|+.+..
T Consensus 80 ~~~~VLDvGcG~G~~~~~la~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~----~~rv~~~~~D~~~~~----------- 143 (253)
T d1tw3a2 80 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL----SDRVDVVEGDFFEPL----------- 143 (253)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC----TTTEEEEECCTTSCC-----------
T ss_pred cCCEEEEeCCCCCHHHHHHHHhcceeEEEEccC-HHHHHHHHHHHHHhhc----ccchhhccccchhhc-----------
Confidence 4589999999999999999987 468889998 6899999999987654 467899888875531
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
..+||+|+++.++++-. ....+++.+.+.|++| +.+++
T Consensus 144 --------------~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG--G~l~i 183 (253)
T d1tw3a2 144 --------------PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG--GRILI 183 (253)
T ss_dssp --------------SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE--EEEEE
T ss_pred --------------ccchhheeeccccccCCchhhHHHHHHHHHhcCCC--cEEEE
Confidence 24699999999998754 3457899999999876 44444
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.00 E-value=2.8e-09 Score=92.25 Aligned_cols=130 Identities=14% Similarity=0.170 Sum_probs=88.2
Q ss_pred CeEeechHH-HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCC
Q 020158 95 GLQVWKAEL-VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSH 171 (330)
Q Consensus 95 G~~vW~aa~-~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~ 171 (330)
|.+.|+.-. -||..++... .-..-+|.+|||||||+|.....+|... .+|++.|+++.|++.++++++..
T Consensus 31 ~~r~w~p~rsklaa~i~~g~-~l~lkpg~~VLDlGcG~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~------ 103 (209)
T d1nt2a_ 31 GYREWVPWRSKLAAMILKGH-RLKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER------ 103 (209)
T ss_dssp TEEECCGGGCHHHHHHHTSC-CCCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC------
T ss_pred ceeeeCCcchHHHHHHhccc-cCCCCCCCEEEEeCCcCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhcc------
Confidence 678998532 4455554421 1244578999999999999998888762 58999999999999999988763
Q ss_pred CCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 172 QGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 172 ~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
+++.+...+-...... ......+|+|+. | +++....+.+++.+.+.|+++ +.+++
T Consensus 104 -~ni~~i~~d~~~~~~~--------------------~~~~~~vd~v~~-~-~~~~~~~~~~l~~~~~~Lkpg--G~l~i 158 (209)
T d1nt2a_ 104 -NNIIPLLFDASKPWKY--------------------SGIVEKVDLIYQ-D-IAQKNQIEILKANAEFFLKEK--GEVVI 158 (209)
T ss_dssp -SSEEEECSCTTCGGGT--------------------TTTCCCEEEEEE-C-CCSTTHHHHHHHHHHHHEEEE--EEEEE
T ss_pred -CCceEEEeeccCcccc--------------------ccccceEEEEEe-c-ccChhhHHHHHHHHHHHhccC--CeEEE
Confidence 4566665554432110 001234665543 4 566778889999999999876 45555
Q ss_pred Eeeee
Q 020158 252 ALEKR 256 (330)
Q Consensus 252 a~~~R 256 (330)
+...|
T Consensus 159 ~~~~~ 163 (209)
T d1nt2a_ 159 MVKAR 163 (209)
T ss_dssp EEEHH
T ss_pred EEEcc
Confidence 54444
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.99 E-value=8.1e-10 Score=101.09 Aligned_cols=113 Identities=13% Similarity=0.062 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
-++++||||+||||..|+.+|..|++|+++|.++.+++.+++|+.+|+.. ..++++...|..+..
T Consensus 131 ~~~~rVLdlf~~tG~~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~---~~~~~~i~~D~~~~l------------ 195 (309)
T d2igta1 131 DRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLE---QAPIRWICEDAMKFI------------ 195 (309)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCT---TSCEEEECSCHHHHH------------
T ss_pred cCCCeEEEecCCCcHHHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhccc---CCcEEEEeCCHHHhH------------
Confidence 47899999999999999999999999999999999999999999999853 245777766643320
Q ss_pred ccccccCccchhccCCeeEEEEeccccC----------cccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYS----------DDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~----------~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
........+||+||.--.-|- ....+.+++.+..+|++++..++..++
T Consensus 196 -------~~~~~~~~~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~~ 253 (309)
T d2igta1 196 -------QREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 253 (309)
T ss_dssp -------HHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred -------HHHhhcCCCCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEecC
Confidence 111223468999997433331 235677888999999887655544443
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=2.4e-10 Score=102.67 Aligned_cols=111 Identities=13% Similarity=0.076 Sum_probs=74.7
Q ss_pred CeEEEEcCccCHHHHHHHHh--------CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 122 IISLELGAGTGLAGILLSRV--------AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~--------~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
.+|||+|||+|..+..+++. ..+++++|.++.|++.+++++....... ...+.+...++.....
T Consensus 42 ~~VLDiGcG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~------ 113 (280)
T d1jqea_ 42 IKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLE--NVKFAWHKETSSEYQS------ 113 (280)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCT--TEEEEEECSCHHHHHH------
T ss_pred CeEEEEcCCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccc--cccccchhhhhhhhcc------
Confidence 37999999999887776653 2368999999999999999986533210 1222233322211000
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
.........+||+|++..++|+......+++.+.++|+++ +.+++..
T Consensus 114 -----------~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg--G~l~i~~ 160 (280)
T d1jqea_ 114 -----------RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN--AKMLIIV 160 (280)
T ss_dssp -----------HHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE--EEEEEEE
T ss_pred -----------hhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC--CEEEEEE
Confidence 0000012468999999999999999999999999999876 4444443
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=98.96 E-value=2.2e-09 Score=93.08 Aligned_cols=99 Identities=19% Similarity=0.138 Sum_probs=72.5
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
..-+|.+|||+|||+|..+..+|+. + .+|+++|+++++++.++.|+..+.. .++.+...|-.+.
T Consensus 72 ~l~~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~-----~n~~~~~~d~~~~-------- 138 (213)
T d1dl5a1 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI-----ENVIFVCGDGYYG-------- 138 (213)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEESCGGGC--------
T ss_pred hccccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcc-----cccccccCchHHc--------
Confidence 5567899999999999999999986 3 5899999999999999999988763 5566554432221
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
.....+||+|++.-.+.+.. + .+.+.|++| +.+++
T Consensus 139 ---------------~~~~~~fD~I~~~~~~~~~p--~----~l~~~LkpG--G~lv~ 173 (213)
T d1dl5a1 139 ---------------VPEFSPYDVIFVTVGVDEVP--E----TWFTQLKEG--GRVIV 173 (213)
T ss_dssp ---------------CGGGCCEEEEEECSBBSCCC--H----HHHHHEEEE--EEEEE
T ss_pred ---------------cccccchhhhhhhccHHHhH--H----HHHHhcCCC--cEEEE
Confidence 11235799999988876532 3 345678775 34444
|
| >d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Possible histamine N-methyltransferase TM1293 species: Thermotoga maritima [TaxId: 2336]
Probab=98.96 E-value=1.4e-09 Score=92.98 Aligned_cols=97 Identities=18% Similarity=0.105 Sum_probs=71.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 120 NGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++.+|||||||+|.....+ ++++++|.++.+++.++++ ++.+...|-.+...
T Consensus 36 ~~~~vLDiGcG~G~~~~~~----~~~~giD~s~~~~~~a~~~------------~~~~~~~d~~~l~~------------ 87 (208)
T d1vlma_ 36 PEGRGVEIGVGTGRFAVPL----KIKIGVEPSERMAEIARKR------------GVFVLKGTAENLPL------------ 87 (208)
T ss_dssp CSSCEEEETCTTSTTHHHH----TCCEEEESCHHHHHHHHHT------------TCEEEECBTTBCCS------------
T ss_pred CCCeEEEECCCCccccccc----ceEEEEeCChhhccccccc------------cccccccccccccc------------
Confidence 3458999999999766554 4679999999999988753 23445544333210
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEeeeeC
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALEKRY 257 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~~R~ 257 (330)
...+||+|++..++++......+++.+.++|+++ +.+++......
T Consensus 88 -----------~~~~fD~I~~~~~l~h~~d~~~~l~~~~~~L~pg--G~l~i~~~~~~ 132 (208)
T d1vlma_ 88 -----------KDESFDFALMVTTICFVDDPERALKEAYRILKKG--GYLIVGIVDRE 132 (208)
T ss_dssp -----------CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEE--EEEEEEEECSS
T ss_pred -----------ccccccccccccccccccccccchhhhhhcCCCC--ceEEEEecCCc
Confidence 1357999999999999999999999999999875 45555544443
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.94 E-value=2.3e-08 Score=87.43 Aligned_cols=134 Identities=16% Similarity=0.182 Sum_probs=88.9
Q ss_pred CcCeEeechHH-HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCC
Q 020158 93 SVGLQVWKAEL-VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGV 168 (330)
Q Consensus 93 ~~G~~vW~aa~-~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~ 168 (330)
...+++|+.-. -||..|+.....-..-+|.+|||||||+|.....+|.. | .+|+++|+++.+++.++.+++.+
T Consensus 45 ~~e~R~w~p~rSKlaa~i~~~l~~l~i~pG~~VLDlGaGsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~--- 121 (227)
T d1g8aa_ 45 GEEYRIWNPNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--- 121 (227)
T ss_dssp TEEEEECCTTTCHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---
T ss_pred CeeEEEECCCccHHHHHHHccccccccCCCCEEEEeccCCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhc---
Confidence 34688998621 33444444321124557999999999999999999987 3 68999999999999999887543
Q ss_pred CCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeE
Q 020158 169 FSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKV 248 (330)
Q Consensus 169 ~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~ 248 (330)
.++.....|-.... .+ ......+|+|+. | +......+.+++.+.++|+++ +.
T Consensus 122 ----~~~~~i~~d~~~~~--------------~~------~~~~~~vD~i~~-d-~~~~~~~~~~l~~~~~~Lkpg--G~ 173 (227)
T d1g8aa_ 122 ----RNIVPILGDATKPE--------------EY------RALVPKVDVIFE-D-VAQPTQAKILIDNAEVYLKRG--GY 173 (227)
T ss_dssp ----TTEEEEECCTTCGG--------------GG------TTTCCCEEEEEE-C-CCSTTHHHHHHHHHHHHEEEE--EE
T ss_pred ----CCceEEEEECCCcc--------------cc------cccccceEEEEE-E-ccccchHHHHHHHHHHhcccC--Ce
Confidence 33444443322210 00 012346888775 4 445677888999999999875 45
Q ss_pred EEEEeeeeC
Q 020158 249 LYLALEKRY 257 (330)
Q Consensus 249 i~va~~~R~ 257 (330)
++++...+.
T Consensus 174 lvi~~ka~~ 182 (227)
T d1g8aa_ 174 GMIAVKSRS 182 (227)
T ss_dssp EEEEEEGGG
T ss_pred EEEEEECCc
Confidence 666654443
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.93 E-value=1.4e-09 Score=97.32 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=74.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
-+|.+|||+|||+|..|+.+|+.+ ++|+++|++|.+++.+++|+.+|+. .+++++...|..+..
T Consensus 106 ~~g~~VlD~~aG~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l----~~~v~~~~~D~~~~~----------- 170 (260)
T d2frna1 106 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKV----EDRMSAYNMDNRDFP----------- 170 (260)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTC----TTTEEEECSCTTTCC-----------
T ss_pred CCccEEEECcceEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCC----CceEEEEEcchHHhc-----------
Confidence 468999999999999999999886 5999999999999999999999986 467888888765431
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
....||.|+....-+... ++....+++++|
T Consensus 171 -------------~~~~~D~Ii~~~p~~~~~----~l~~a~~~l~~g 200 (260)
T d2frna1 171 -------------GENIADRILMGYVVRTHE----FIPKALSIAKDG 200 (260)
T ss_dssp -------------CCSCEEEEEECCCSSGGG----GHHHHHHHEEEE
T ss_pred -------------cCCCCCEEEECCCCchHH----HHHHHHhhcCCC
Confidence 124799999776555443 444455677654
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=98.92 E-value=7.2e-09 Score=95.22 Aligned_cols=112 Identities=6% Similarity=-0.045 Sum_probs=79.5
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
..+|++||||.||+|..|+.+|..| .+|+++|.++.+++.+++|+++|+.. ..++++...|-.+.
T Consensus 142 ~~~g~~VLdlf~~~G~~sl~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~---~~~~~~i~~d~~~~----------- 207 (317)
T d2b78a2 142 SAAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLD---MANHQLVVMDVFDY----------- 207 (317)
T ss_dssp TTBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCC---CTTEEEEESCHHHH-----------
T ss_pred hhCCCceeecCCCCcHHHHHHHhCCCceEEEecCCHHHHHHHHHHHHHhccc---CcceEEEEccHHHH-----------
Confidence 3578999999999999999988876 48999999999999999999999863 24667666653221
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCc---------ccHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSD---------DLTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~---------~~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
-+.......+||+||.--.-+.. ..+..|++...++|+++ ++++++.
T Consensus 208 --------l~~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg--G~l~~~s 263 (317)
T d2b78a2 208 --------FKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN--GLIIAST 263 (317)
T ss_dssp --------HHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE--EEEEEEE
T ss_pred --------HHHHHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC--CEEEEEe
Confidence 00111234689999975443321 24567888888899775 4555543
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=98.92 E-value=3.1e-09 Score=95.50 Aligned_cols=77 Identities=18% Similarity=0.338 Sum_probs=61.6
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEe
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDL 180 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~l 180 (330)
+..|.+++.... ..-...+|+|+|||+|..+++++.. ..+|+++|+++.+++.+++|++.|+. ..++.+...
T Consensus 95 TE~lv~~~~~~~---~~~~~~~vld~g~GsG~i~~~la~~~~~~v~a~Dis~~Al~~A~~Na~~~~~----~~~~~i~~~ 167 (271)
T d1nv8a_ 95 TEELVELALELI---RKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGV----SDRFFVRKG 167 (271)
T ss_dssp HHHHHHHHHHHH---HHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTC----TTSEEEEES
T ss_pred hhhhhhhhhhhh---ccccccEEEEeeeeeehhhhhhhhcccceeeechhhhhHHHHHHHHHHHcCC----CceeEEeec
Confidence 455666666542 1123468999999999999999877 47999999999999999999999885 467888888
Q ss_pred cCCCC
Q 020158 181 NWMNP 185 (330)
Q Consensus 181 dW~~~ 185 (330)
+|.+.
T Consensus 168 ~~~~~ 172 (271)
T d1nv8a_ 168 EFLEP 172 (271)
T ss_dssp STTGG
T ss_pred ccccc
Confidence 88765
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.89 E-value=7.5e-09 Score=95.32 Aligned_cols=108 Identities=13% Similarity=0.035 Sum_probs=76.1
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 120 NGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
+|++|||+|||+|..|+.+|+.| .+|+++|+++.+++.+++|+..|+. ..++++...|..+.
T Consensus 145 ~g~~VLDl~~g~G~~si~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl----~~~~~~~~~d~~~~------------- 207 (324)
T d2as0a2 145 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGV----EDRMKFIVGSAFEE------------- 207 (324)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC----GGGEEEEESCHHHH-------------
T ss_pred CCCeeecccCcccchhhhhhhcCCcEEEeecCCHHHHHHHHHHHHHcCC----Cccceeeechhhhh-------------
Confidence 58999999999999999999886 5899999999999999999999985 35677766653321
Q ss_pred ccccccCccchhccCCeeEEEEeccccCcc---------cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSDD---------LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~~---------~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.........+||+|+.--..+... ....++....++|++| +.++++
T Consensus 208 ------~~~~~~~~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG--G~lv~~ 262 (324)
T d2as0a2 208 ------MEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG--GILVTC 262 (324)
T ss_dssp ------HHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE--EEEEEE
T ss_pred ------hHHHHhccCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC--cEEEEE
Confidence 000111346899999643333211 2445677777788765 444443
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=98.88 E-value=5.2e-09 Score=93.85 Aligned_cols=102 Identities=12% Similarity=0.069 Sum_probs=75.8
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
...+|.+|||+|||+|..++.+|+. +.+|++.|.++++++.+++|+..++. ..++.+..-|-....
T Consensus 100 ~i~pG~~VLDiG~GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~----~~~v~~~~~d~~~~~------- 168 (266)
T d1o54a_ 100 DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL----IERVTIKVRDISEGF------- 168 (266)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC----GGGEEEECCCGGGCC-------
T ss_pred CCCCCCEEEECCCCCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhcc----ccCcEEEeccccccc-------
Confidence 5678999999999999999999987 36999999999999999999998764 345555443321110
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
....+|.|+ .+......+++.+.++|++|+..++|+
T Consensus 169 -----------------~~~~~D~V~-----~d~p~p~~~l~~~~~~LKpGG~lv~~~ 204 (266)
T d1o54a_ 169 -----------------DEKDVDALF-----LDVPDPWNYIDKCWEALKGGGRFATVC 204 (266)
T ss_dssp -----------------SCCSEEEEE-----ECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred -----------------cccceeeeE-----ecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence 124678765 345667788999999998875544443
|
| >d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Methyltransferase 10 domain domain: Methyltransferase 10 domain containing protein METT10D species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=6.6e-09 Score=92.33 Aligned_cols=87 Identities=13% Similarity=0.158 Sum_probs=68.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+..+|||||||+|..++.+|.. ..+|+++|+++++++.+++|++.|+. ..++.+...+|.........
T Consensus 61 ~~~~~LDiGtGsg~I~~~l~~~~~~~~~~~~Di~~~al~~A~~N~~~n~l----~~~~~~~~~~~~~~~~~~~~------ 130 (250)
T d2h00a1 61 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL----SDLIKVVKVPQKTLLMDALK------ 130 (250)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC----TTTEEEEECCTTCSSTTTST------
T ss_pred ccceEEEeCCCchHHHHHHHHhCCCccccceecCHHHHHHHHHHHHHhCC----CcceeeeeeccHHhhhhhhh------
Confidence 4569999999999999998887 68999999999999999999999986 57788888877654211100
Q ss_pred cccccccCccchhccCCeeEEEEeccccCc
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSD 227 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~ 227 (330)
....++||+|++.-..|..
T Consensus 131 -----------~~~~~~fD~ivsNPPY~~~ 149 (250)
T d2h00a1 131 -----------EESEIIYDFCMCNPPFFAN 149 (250)
T ss_dssp -----------TCCSCCBSEEEECCCCC--
T ss_pred -----------hcccCceeEEEecCccccc
Confidence 0123579999999888864
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=98.86 E-value=7.9e-09 Score=90.34 Aligned_cols=106 Identities=14% Similarity=0.143 Sum_probs=75.3
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN 181 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld 181 (330)
+..+..+|++.. ..-+|.+|||+|||+|..+..+|+.+.+|+++|.++.+++.+++|... ..++.+...|
T Consensus 55 ~p~~~a~ml~~L---~l~~g~~VLdIG~GsGy~ta~La~l~~~V~aiE~~~~~~~~A~~~~~~-------~~nv~~~~~d 124 (224)
T d1vbfa_ 55 ALNLGIFMLDEL---DLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSY-------YNNIKLILGD 124 (224)
T ss_dssp CHHHHHHHHHHT---TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTT-------CSSEEEEESC
T ss_pred hhhhHHHHHHHh---hhcccceEEEecCCCCHHHHHHHHHhcccccccccHHHHHHHHHHHhc-------ccccccccCc
Confidence 333444455553 556889999999999999999999999999999999999999988653 2567777665
Q ss_pred CCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 182 WMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 182 W~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
-...+ ....+||.|+..-.+.+ ..+ .+.+.|++|+.
T Consensus 125 ~~~g~-----------------------~~~~pfD~Iiv~~a~~~--ip~----~l~~qLk~GGr 160 (224)
T d1vbfa_ 125 GTLGY-----------------------EEEKPYDRVVVWATAPT--LLC----KPYEQLKEGGI 160 (224)
T ss_dssp GGGCC-----------------------GGGCCEEEEEESSBBSS--CCH----HHHHTEEEEEE
T ss_pred hhhcc-----------------------hhhhhHHHHHhhcchhh--hhH----HHHHhcCCCCE
Confidence 33321 12357999998766543 333 34567877643
|
| >d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methylase YhhF species: Escherichia coli [TaxId: 562]
Probab=98.84 E-value=3.9e-09 Score=89.35 Aligned_cols=108 Identities=15% Similarity=0.160 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+.+++||||+||+|..|+.++.+| .+|+++|.++.+++.+++|++.+.. .++.+...|..+...
T Consensus 42 ~~~~~vLDlfaGsG~~giealsrGa~~v~~VE~~~~a~~~~k~N~~~~~~-----~~~~ii~~d~~~~l~---------- 106 (183)
T d2fpoa1 42 IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-----GNARVVNSNAMSFLA---------- 106 (183)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-----CSEEEECSCHHHHHS----------
T ss_pred cchhhhhhhhccccceeeeEEecCcceeEEEEEeechhhHHHHHHhhccc-----cceeeeeeccccccc----------
Confidence 678899999999999999888886 5899999999999999999998763 456665554332110
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHH--hccCCCCeEEEEEeeee
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKR--LMPLGSKKVLYLALEKR 256 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~--lL~~~~~~~i~va~~~R 256 (330)
....+||+|++- .=|.....+.++..+.. +|++ ++++++-..++
T Consensus 107 ------------~~~~~fDlIf~D-PPY~~~~~~~~l~~l~~~~~L~~--~~iIiiE~~~~ 152 (183)
T d2fpoa1 107 ------------QKGTPHNIVFVD-PPFRRGLLEETINLLEDNGWLAD--EALIYVESEVE 152 (183)
T ss_dssp ------------SCCCCEEEEEEC-CSSSTTTHHHHHHHHHHTTCEEE--EEEEEEEEEGG
T ss_pred ------------ccccccCEEEEc-CccccchHHHHHHHHHHCCCCCC--CeEEEEEecCc
Confidence 123579988864 45777888888888876 3543 46676644433
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.83 E-value=9.5e-09 Score=91.96 Aligned_cols=105 Identities=19% Similarity=0.169 Sum_probs=76.8
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
..-+|.+|||+|||+|..++.+|+. + .+|+..|.++++++.+++|++.-.... ..++.+...|-.+..
T Consensus 93 ~i~PG~~VLE~G~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~--~~nv~~~~~d~~~~~------- 163 (264)
T d1i9ga_ 93 DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP--PDNWRLVVSDLADSE------- 163 (264)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC--CTTEEEECSCGGGCC-------
T ss_pred CCCCCCEEEecCcCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCC--CceEEEEeccccccc-------
Confidence 4567999999999999999999987 3 589999999999999999998642111 356777666544321
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
+ ....||.|+. | -......+..+.++|++++..++|+
T Consensus 164 ---------------~-~~~~fDaV~l-d----lp~P~~~l~~~~~~LkpGG~lv~~~ 200 (264)
T d1i9ga_ 164 ---------------L-PDGSVDRAVL-D----MLAPWEVLDAVSRLLVAGGVLMVYV 200 (264)
T ss_dssp ---------------C-CTTCEEEEEE-E----SSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ---------------c-cCCCcceEEE-e----cCCHHHHHHHHHhccCCCCEEEEEe
Confidence 0 1357999875 3 3455677888999998875444443
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.83 E-value=6.9e-09 Score=90.67 Aligned_cols=101 Identities=17% Similarity=0.215 Sum_probs=71.1
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLG 193 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~ 193 (330)
..-+|.+|||+|||+|..+..+|+. ..+|++.|+++++++.+++|+..+........++.+...|-....
T Consensus 73 ~l~~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~------- 145 (224)
T d1i1na_ 73 QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY------- 145 (224)
T ss_dssp TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC-------
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc-------
Confidence 4457899999999999998888886 359999999999999999999875431100245666655432221
Q ss_pred CCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCC
Q 020158 194 NSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSK 246 (330)
Q Consensus 194 ~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~ 246 (330)
.....||+|+..-.+.+. . ..+.+.|++|+.
T Consensus 146 ----------------~~~~~fD~I~~~~~~~~i--p----~~l~~~LkpGG~ 176 (224)
T d1i1na_ 146 ----------------AEEAPYDAIHVGAAAPVV--P----QALIDQLKPGGR 176 (224)
T ss_dssp ----------------GGGCCEEEEEECSBBSSC--C----HHHHHTEEEEEE
T ss_pred ----------------chhhhhhhhhhhcchhhc--C----HHHHhhcCCCcE
Confidence 123589999998877653 2 345667877643
|
| >d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase EF2452 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.82 E-value=3.2e-09 Score=89.92 Aligned_cols=114 Identities=16% Similarity=0.177 Sum_probs=82.2
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
..+.|++||||+||+|..|+.++.+| .+|+++|.++.+++.+++|++.++. ..++.+...|..+...
T Consensus 38 ~~~~~~~vLDlfaGsG~~g~ea~srGa~~v~~ve~~~~a~~~~~~N~~~~~~----~~~~~i~~~D~~~~l~-------- 105 (182)
T d2fhpa1 38 PYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKE----PEKFEVRKMDANRALE-------- 105 (182)
T ss_dssp SCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEESCHHHHHH--------
T ss_pred HhcCCCEEEEcccccccccceeeecchhHHHHHHHHHHHHHHHHHHhhhhhc----ccccccccccchhhhh--------
Confidence 45789999999999999999998886 4799999999999999999998774 3578887776443210
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHH--hccCCCCeEEEEEeeee
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKR--LMPLGSKKVLYLALEKR 256 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~--lL~~~~~~~i~va~~~R 256 (330)
.......+||+|+ .|.=|.......++..|.. +|++ ++++++-..++
T Consensus 106 -----------~~~~~~~~fDlIf-lDPPY~~~~~~~~l~~i~~~~~L~~--~giIi~E~~~~ 154 (182)
T d2fhpa1 106 -----------QFYEEKLQFDLVL-LDPPYAKQEIVSQLEKMLERQLLTN--EAVIVCETDKT 154 (182)
T ss_dssp -----------HHHHTTCCEEEEE-ECCCGGGCCHHHHHHHHHHTTCEEE--EEEEEEEEETT
T ss_pred -----------hhcccCCCcceEE-echhhhhhHHHHHHHHHHHCCCCCC--CEEEEEEcCCC
Confidence 0011235799887 4555777777777777654 4644 45666644433
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=98.80 E-value=1.9e-08 Score=89.44 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=77.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++|||+|||+|..++.+++. ..++++.|+ |++++.+++++...+. ..++.+...|..++.
T Consensus 81 ~~~~vlDvG~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~----~~ri~~~~~d~~~~~----------- 144 (256)
T d1qzza2 81 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL----ADRVTVAEGDFFKPL----------- 144 (256)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC----TTTEEEEECCTTSCC-----------
T ss_pred cCCEEEEECCCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCC----cceeeeeeeeccccc-----------
Confidence 3478999999999999999987 579999998 6899999999987664 467888887755431
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGS 245 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~ 245 (330)
...+|+|+++.|+++-. ....+++.+.+.|++++
T Consensus 145 --------------p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG 180 (256)
T d1qzza2 145 --------------PVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGG 180 (256)
T ss_dssp --------------SCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred --------------cccchhhhccccccccCcHHHHHHHHHHHhhcCCcc
Confidence 23699999999998754 44678999999998763
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=98.78 E-value=3e-08 Score=88.60 Aligned_cols=94 Identities=15% Similarity=0.070 Sum_probs=68.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.++.+|||+|||+|..+..++.. +.+|+++|+++.+++.++++. .++.+...|..+..-
T Consensus 83 ~~~~~iLDiGcG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~----------~~~~~~~~d~~~l~~--------- 143 (268)
T d1p91a_ 83 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----------PQVTFCVASSHRLPF--------- 143 (268)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----------TTSEEEECCTTSCSB---------
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCEEEEecchHhhhhhhhccc----------ccccceeeehhhccC---------
Confidence 46789999999999999988887 468999999999999887642 345666666544310
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
..+.||+|++..+..+ ++.+.++|+++ +.++++..
T Consensus 144 --------------~~~sfD~v~~~~~~~~-------~~e~~rvLkpg--G~l~~~~p 178 (268)
T d1p91a_ 144 --------------SDTSMDAIIRIYAPCK-------AEELARVVKPG--GWVITATP 178 (268)
T ss_dssp --------------CTTCEEEEEEESCCCC-------HHHHHHHEEEE--EEEEEEEE
T ss_pred --------------CCCCEEEEeecCCHHH-------HHHHHHHhCCC--cEEEEEee
Confidence 2357999998766543 45688899875 55555544
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.77 E-value=2e-08 Score=87.22 Aligned_cols=105 Identities=16% Similarity=0.246 Sum_probs=78.5
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecC
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNW 182 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW 182 (330)
.+...+++.. ..-+|.+|||+|||+|..+.++|+. +.+|++.|.++++++.+++|+...+ ..++.+...|.
T Consensus 65 ~~~a~ml~~L---~l~~g~~VLeIGsGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g-----~~nv~~~~gd~ 136 (215)
T d1jg1a_ 65 HMVAIMLEIA---NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAG-----VKNVHVILGDG 136 (215)
T ss_dssp HHHHHHHHHH---TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTT-----CCSEEEEESCG
T ss_pred hhHHHHHHhh---ccCccceEEEecCCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcC-----CceeEEEECcc
Confidence 3333444443 5678899999999999999999877 6689999999999999999999877 47888888775
Q ss_pred CCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 183 MNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
...++ ...+||.|+..-.+.. ..+.| ...|++|+
T Consensus 137 ~~g~~-----------------------~~~pfD~Iiv~~a~~~--ip~~l----~~qL~~gG 170 (215)
T d1jg1a_ 137 SKGFP-----------------------PKAPYDVIIVTAGAPK--IPEPL----IEQLKIGG 170 (215)
T ss_dssp GGCCG-----------------------GGCCEEEEEECSBBSS--CCHHH----HHTEEEEE
T ss_pred ccCCc-----------------------ccCcceeEEeeccccc--CCHHH----HHhcCCCC
Confidence 54422 3468999998877754 33443 44576654
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=3.6e-08 Score=90.64 Aligned_cols=109 Identities=17% Similarity=0.097 Sum_probs=75.2
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh-C--CeEEEEeCchHHHHHHHHHHHHccC------CCCCCCeeEEEEecCCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV-A--WTVFLTDHGNYILDNCAKNVQLNSG------VFSHQGSVHVRDLNWMNPWP 187 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~-~--~~V~~TD~~~~~L~~~~~Nv~~N~~------~~~~~~~v~v~~ldW~~~~~ 187 (330)
...+|.+|||+|||+|..++.+|+. + .+|+..|+++++++.+++|++.... ......++.+...|..+...
T Consensus 95 ~i~pG~rVLE~GtGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di~~~~~ 174 (324)
T d2b25a1 95 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 174 (324)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEecccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecchhhccc
Confidence 5668999999999999999999987 3 5899999999999999999986421 00114567777776554321
Q ss_pred CCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 188 PIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 188 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
.. ....||.|+. |+ ......+..+.++|++|+..++|+
T Consensus 175 ~~---------------------~~~~fD~V~L-D~----p~P~~~l~~~~~~LKpGG~lv~~~ 212 (324)
T d2b25a1 175 DI---------------------KSLTFDAVAL-DM----LNPHVTLPVFYPHLKHGGVCAVYV 212 (324)
T ss_dssp ---------------------------EEEEEE-CS----SSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred cc---------------------CCCCcceEee-cC----cCHHHHHHHHHHhccCCCEEEEEe
Confidence 10 1247998875 44 233456788899998875544444
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=98.63 E-value=1.3e-07 Score=87.58 Aligned_cols=121 Identities=12% Similarity=0.071 Sum_probs=84.9
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEe
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDL 180 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~l 180 (330)
++..|.+++.+.. ..-++.+||||-||+|..|+.+|+.+++|+++|.++.+++.+++|+..|+. .++.+...
T Consensus 196 ~~e~l~~~v~~~~---~~~~~~~vlDLycG~G~fsl~La~~~~~V~gvE~~~~ai~~A~~na~~n~i-----~n~~~~~~ 267 (358)
T d1uwva2 196 VNQKMVARALEWL---DVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGL-----QNVTFYHE 267 (358)
T ss_dssp HHHHHHHHHHHHH---TCCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEEC
T ss_pred hhhHHHHHHHHhh---ccCCCceEEEecccccccchhccccccEEEeccCcHHHHHHHHHhHHhccc-----ccceeeec
Confidence 3556666666553 345678999999999999999999999999999999999999999999994 67777776
Q ss_pred cCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEEee
Q 020158 181 NWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLALE 254 (330)
Q Consensus 181 dW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va~~ 254 (330)
+-.+..... ......+|+||.--.= .... .+++.|.++ +++.++|||..
T Consensus 268 ~~~~~~~~~-------------------~~~~~~~d~vilDPPR--~G~~-~~~~~l~~~---~~~~ivYVSCn 316 (358)
T d1uwva2 268 NLEEDVTKQ-------------------PWAKNGFDKVLLDPAR--AGAA-GVMQQIIKL---EPIRIVYVSCN 316 (358)
T ss_dssp CTTSCCSSS-------------------GGGTTCCSEEEECCCT--TCCH-HHHHHHHHH---CCSEEEEEESC
T ss_pred chhhhhhhh-------------------hhhhccCceEEeCCCC--ccHH-HHHHHHHHc---CCCEEEEEeCC
Confidence 644432111 1123578987643221 1232 344444443 56789999863
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=98.61 E-value=1.2e-07 Score=81.41 Aligned_cols=103 Identities=10% Similarity=0.039 Sum_probs=76.5
Q ss_pred CeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 122 IISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
..|||||||+|-..+.+|+. ...+++.|+++.++..+..++..++ ..++.+...|-....
T Consensus 31 PlvLeIGcG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~-----l~Nv~~~~~Da~~l~------------- 92 (204)
T d2fcaa1 31 PIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE-----AQNVKLLNIDADTLT------------- 92 (204)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC-----CSSEEEECCCGGGHH-------------
T ss_pred ceEEEEEecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHh-----ccCchhcccchhhhh-------------
Confidence 47999999999999988887 5799999999999999999998887 367888777643210
Q ss_pred cccccCccchhccCCeeEEEEeccccCccc--------HHHHHHHHHHhccCCCCeEEEEE
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDL--------TDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~--------~~~l~~tl~~lL~~~~~~~i~va 252 (330)
+.-....+|.|...-...++.. .+.+++.+.++|++| +.++++
T Consensus 93 --------~~~~~~~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg--G~l~i~ 143 (204)
T d2fcaa1 93 --------DVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG--GSIHFK 143 (204)
T ss_dssp --------HHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS--CEEEEE
T ss_pred --------cccCchhhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCC--cEEEEE
Confidence 0012356888775544444332 368999999999876 556664
|
| >d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase HI0767 species: Haemophilus influenzae [TaxId: 727]
Probab=98.53 E-value=3.3e-07 Score=77.11 Aligned_cols=111 Identities=15% Similarity=0.155 Sum_probs=81.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEec---CCCCCCCCccCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLN---WMNPWPPIFSLGN 194 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ld---W~~~~~~~~~~~~ 194 (330)
+.|.+||||-||||..|+-++.+| .+|++.|.+..+++.+++|++..+.. .....+...| |....
T Consensus 42 ~~~~~vLDlFaGsG~~glEalSRGA~~v~fVE~~~~a~~~ik~Ni~~l~~~---~~~~~~~~~d~~~~l~~~-------- 110 (183)
T d2ifta1 42 IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCS---SEQAEVINQSSLDFLKQP-------- 110 (183)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCC---TTTEEEECSCHHHHTTSC--------
T ss_pred cccceEeecccCccceeeeeeeecceeeEEeecccchhhhHhhHHhhhccc---cccccccccccccccccc--------
Confidence 577899999999999999999996 59999999999999999999876532 2234444433 22210
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHH--hccCCCCeEEEEEeeeeCc
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKR--LMPLGSKKVLYLALEKRYN 258 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~--lL~~~~~~~i~va~~~R~~ 258 (330)
....+||+|+ .|.=|.......++..|.. +|+ +++++++-..++..
T Consensus 111 ---------------~~~~~fDlIF-lDPPY~~~~~~~~l~~l~~~~~L~--~~~liiiE~~~~~~ 158 (183)
T d2ifta1 111 ---------------QNQPHFDVVF-LDPPFHFNLAEQAISLLCENNWLK--PNALIYVETEKDKP 158 (183)
T ss_dssp ---------------CSSCCEEEEE-ECCCSSSCHHHHHHHHHHHTTCEE--EEEEEEEEEESSSC
T ss_pred ---------------ccCCcccEEE-echhHhhhhHHHHHHHHHHhCCcC--CCcEEEEEecCCCC
Confidence 0124799885 6777888888888888876 454 35677776555543
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.53 E-value=6.1e-08 Score=84.48 Aligned_cols=100 Identities=12% Similarity=0.154 Sum_probs=69.5
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhC--------CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVA--------WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPP 188 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~--------~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~ 188 (330)
..-+|.+|||+|||+|..+.++|+.. .+|+..|.++++++.+++|+..+........++.+...|-.+.++
T Consensus 77 ~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~- 155 (223)
T d1r18a_ 77 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP- 155 (223)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG-
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccccc-
Confidence 34578999999999999988888762 389999999999999999986542100002467777766433211
Q ss_pred CccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 189 IFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 189 ~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
...+||.|+..-.+.... + .+.+.|++|+
T Consensus 156 ----------------------~~~~fD~Iiv~~a~~~~p--~----~l~~~Lk~gG 184 (223)
T d1r18a_ 156 ----------------------PNAPYNAIHVGAAAPDTP--T----ELINQLASGG 184 (223)
T ss_dssp ----------------------GGCSEEEEEECSCBSSCC--H----HHHHTEEEEE
T ss_pred ----------------------cccceeeEEEEeechhch--H----HHHHhcCCCc
Confidence 235899999877775432 3 3556777653
|
| >d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.50 E-value=1.1e-06 Score=75.19 Aligned_cols=104 Identities=13% Similarity=0.054 Sum_probs=76.6
Q ss_pred CeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 122 IISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
..|||+|||+|-..+.+|+. ...+++.|+++.++..+.+++..++ ..++.+...|..+....
T Consensus 33 plvLdIGcG~G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~-----l~Ni~~~~~da~~l~~~----------- 96 (204)
T d1yzha1 33 PIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG-----VPNIKLLWVDGSDLTDY----------- 96 (204)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC-----CSSEEEEECCSSCGGGT-----------
T ss_pred CeEEEEeccCCHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhc-----cccceeeecCHHHHhhh-----------
Confidence 47999999999888888887 5789999999999999999998877 36889888886553211
Q ss_pred cccccCccchhccCCeeEEEEeccccCcc--------cHHHHHHHHHHhccCCCCeEEEEEe
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDD--------LTDALFHTLKRLMPLGSKKVLYLAL 253 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~--------~~~~l~~tl~~lL~~~~~~~i~va~ 253 (330)
+ ....+|.|...=.-.++. ....+++.+.++|++| +.++++.
T Consensus 97 ---------~-~~~~~~~i~i~fPdPw~K~~h~krRl~~~~~l~~~~~~Lkpg--G~l~i~T 146 (204)
T d1yzha1 97 ---------F-EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPEN--GEIHFKT 146 (204)
T ss_dssp ---------S-CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTT--CEEEEEE
T ss_pred ---------c-cCCceehhcccccccccchhhhhhhhhHHHHHHHHHHhCCCC--cEEEEEE
Confidence 1 234688877432222221 3479999999999876 4566643
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.46 E-value=4.1e-07 Score=83.48 Aligned_cols=106 Identities=9% Similarity=0.123 Sum_probs=74.1
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccC-----CCCCCCeeEEEEecCCCCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSG-----VFSHQGSVHVRDLNWMNPWPPI 189 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~-----~~~~~~~v~v~~ldW~~~~~~~ 189 (330)
..-++.+|||||||+|-+.+.+|+. +.+|++.|+++.+++.++.++..... ... ..++.+...|..+..
T Consensus 148 ~l~~~~~vlD~GcG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~-~~~i~~~~gd~~~~~--- 223 (328)
T d1nw3a_ 148 KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYTLERGDFLSEE--- 223 (328)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCC-CCCEEEEECCTTSHH---
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhcccc-CCceEEEECcccccc---
Confidence 4456889999999999999988876 46899999999999999887755321 001 467888888866531
Q ss_pred ccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 190 FSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 190 ~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
+ .+....+|+|++....|.+ .....+..+.+.|++|+
T Consensus 224 --------------~----~~~~~~advi~~~~~~f~~-~~~~~l~e~~r~LKpGg 260 (328)
T d1nw3a_ 224 --------------W----RERIANTSVIFVNNFAFGP-EVDHQLKERFANMKEGG 260 (328)
T ss_dssp --------------H----HHHHHHCSEEEECCTTTCH-HHHHHHHHHHTTCCTTC
T ss_pred --------------c----ccccCcceEEEEcceecch-HHHHHHHHHHHhCCCCc
Confidence 0 0011246888887666554 44566677778887764
|
| >d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Catechol O-methyltransferase, COMT species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.37 E-value=4.7e-07 Score=78.16 Aligned_cols=62 Identities=15% Similarity=0.178 Sum_probs=53.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
.+.++|||+|||+|..++.+|+. +.+|+++|.++++++.++.|+...+. ..++++...+..+
T Consensus 55 ~kpk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl----~~~i~l~~Gd~~e 119 (214)
T d2cl5a1 55 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGL----QDKVTILNGASQD 119 (214)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTC----GGGEEEEESCHHH
T ss_pred hCCCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCC----Cccceeeeccccc
Confidence 35689999999999999999975 57999999999999999999998774 4678888777554
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.29 E-value=3e-06 Score=79.72 Aligned_cols=108 Identities=11% Similarity=0.106 Sum_probs=69.5
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCC----CCCCeeEE-EEecCCCCCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVF----SHQGSVHV-RDLNWMNPWPPI 189 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~----~~~~~v~v-~~ldW~~~~~~~ 189 (330)
..-+|.+|||||||+|-+.+.+|.. +++|++.|+++.+++.+++++....... .....+.. ...+..+.
T Consensus 213 ~Lkpgd~fLDLGCG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~~~---- 288 (406)
T d1u2za_ 213 QLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDN---- 288 (406)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTC----
T ss_pred CCCCCCEEEeCCCCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechhhc----
Confidence 4567899999999999888888876 4689999999999999999887643100 00111111 11111110
Q ss_pred ccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCC
Q 020158 190 FSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGS 245 (330)
Q Consensus 190 ~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~ 245 (330)
.........+|+|+....+| .......+..+.+.|++|+
T Consensus 289 ----------------~~~d~~~~~adVV~inn~~f-~~~l~~~L~ei~r~LKPGG 327 (406)
T d1u2za_ 289 ----------------NRVAELIPQCDVILVNNFLF-DEDLNKKVEKILQTAKVGC 327 (406)
T ss_dssp ----------------HHHHHHGGGCSEEEECCTTC-CHHHHHHHHHHHTTCCTTC
T ss_pred ----------------cccccccccceEEEEecccC-chHHHHHHHHHHHhcCCCc
Confidence 00011234688999776555 4556677778888998764
|
| >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: COMT domain-containing protein 1, COMTD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.29 E-value=7.4e-07 Score=77.21 Aligned_cols=108 Identities=13% Similarity=0.107 Sum_probs=78.5
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGN 194 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~ 194 (330)
..+.++|||+|||+|..++.+|.. +.+|+..|.+++..+.++.|+...+. ..++++...+..+..+...
T Consensus 57 ~~~~k~vLEiGt~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~----~~~i~~~~Gda~e~l~~~~---- 128 (219)
T d2avda1 57 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA----EHKIDLRLKPALETLDELL---- 128 (219)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC----TTTEEEEESCHHHHHHHHH----
T ss_pred ccCCCeEEEEechhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCc----cceEEEEEeehhhcchhhh----
Confidence 356799999999999999999976 46999999999999999999998775 4667777766433211000
Q ss_pred CCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEE
Q 020158 195 SSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 195 ~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
......+||+|+.- -+.......+..+.++|++| +++++
T Consensus 129 -------------~~~~~~~fD~ifiD---~dk~~y~~~~~~~~~lL~~G--Gvii~ 167 (219)
T d2avda1 129 -------------AAGEAGTFDVAVVD---ADKENCSAYYERCLQLLRPG--GILAV 167 (219)
T ss_dssp -------------HTTCTTCEEEEEEC---SCSTTHHHHHHHHHHHEEEE--EEEEE
T ss_pred -------------hhcccCCccEEEEe---CCHHHHHHHHHHHHHHhcCC--cEEEE
Confidence 00013579999863 34566777778888999764 55544
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.11 E-value=7.1e-06 Score=71.19 Aligned_cols=103 Identities=13% Similarity=0.110 Sum_probs=77.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
.+.++|||+|+++|..++.+|.. ..+|+.+|.+++..+.+++|+...+. ..++++...+..+..+...
T Consensus 58 ~~~k~iLEiGT~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~----~~~i~~~~g~a~~~L~~l~----- 128 (227)
T d1susa1 58 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV----DHKIDFREGPALPVLDEMI----- 128 (227)
T ss_dssp HTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC----GGGEEEEESCHHHHHHHHH-----
T ss_pred cCCCcEEEecchhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhcc----ccceeeeehHHHHHHHHHH-----
Confidence 46689999999999999999975 46999999999999999999998775 4678888776544311100
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
.+.....+||+|+. |. +.......++.+..+|++|
T Consensus 129 -----------~~~~~~~~fD~iFi-Da--~k~~y~~~~e~~~~ll~~g 163 (227)
T d1susa1 129 -----------KDEKNHGSYDFIFV-DA--DKDNYLNYHKRLIDLVKVG 163 (227)
T ss_dssp -----------HCGGGTTCBSEEEE-CS--CSTTHHHHHHHHHHHBCTT
T ss_pred -----------hccccCCceeEEEe-cc--chhhhHHHHHHHHhhcCCC
Confidence 00001357999986 43 4567788888888999775
|
| >d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N-6 DNA Methylase-like domain: Hypothetical protein Lmo1582 species: Listeria monocytogenes [TaxId: 1639]
Probab=97.98 E-value=9.8e-05 Score=66.68 Aligned_cols=134 Identities=9% Similarity=0.064 Sum_probs=85.5
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh-------CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeE
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV-------AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVH 176 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~-------~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~ 176 (330)
+|++.+.... ..-.+.+|||.|||+|...+.+... ..++++.|+++.++..++.|+..+.. ...
T Consensus 104 ~m~~l~~~~~---~~~~~~~vlDp~~GsG~~l~~~~~~l~~~~~~~~~~~g~di~~~~~~~a~~~~~~~~~------~~~ 174 (328)
T d2f8la1 104 IVAYLLEKVI---QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ------KMT 174 (328)
T ss_dssp HHHHHHHHHH---TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC------CCE
T ss_pred HHHHHHHHHh---CCCCCCEEEeCCCCcchhHHHHHHHHHhccCccceEEEecccHHHHHHHHHHHHHhhh------hhh
Confidence 4555544332 2345679999999999877777643 13799999999999999999998763 334
Q ss_pred EEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC------------------cccHHHHHHHHH
Q 020158 177 VRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS------------------DDLTDALFHTLK 238 (330)
Q Consensus 177 v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~------------------~~~~~~l~~tl~ 238 (330)
....++.... ...+||+||+.-.+-. ....-.|+....
T Consensus 175 ~~~~d~~~~~------------------------~~~~fD~vi~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~Fi~~~~ 230 (328)
T d2f8la1 175 LLHQDGLANL------------------------LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGM 230 (328)
T ss_dssp EEESCTTSCC------------------------CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHH
T ss_pred hhcccccccc------------------------ccccccccccCCCCCCCccchhhhhcchhcccCcchHHHHHHHHHH
Confidence 4444443321 1357999999876421 113445788888
Q ss_pred HhccCCCCeEEEEEeeeeCcccccchhhhccccchhhhhhhh
Q 020158 239 RLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIME 280 (330)
Q Consensus 239 ~lL~~~~~~~i~va~~~R~~f~~~~~d~v~~~y~~f~~~l~~ 280 (330)
++|+++|...+++. ... + -...+..+|.+|.+
T Consensus 231 ~~Lk~~G~~~~I~p--~~~-l-------~~~~~~~lR~~L~~ 262 (328)
T d2f8la1 231 RYTKPGGYLFFLVP--DAM-F-------GTSDFAKVDKFIKK 262 (328)
T ss_dssp HTEEEEEEEEEEEE--GGG-G-------GSTTHHHHHHHHHH
T ss_pred HhcCCCCceEEEec--Ccc-c-------cCchhHHHHHHHHh
Confidence 88887654444443 221 1 11336778888864
|
| >d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glucose-inhibited division protein B (GidB) domain: Glucose-inhibited division protein B (GidB) species: Escherichia coli [TaxId: 562]
Probab=97.92 E-value=3.8e-05 Score=65.49 Aligned_cols=93 Identities=14% Similarity=0.025 Sum_probs=68.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
+.+.+|+|+|+|.|++|+.+|-. ..+|++.|-...=+..++.=+..-+ ..++++..-...+..
T Consensus 64 ~~~~~ilDiGsGaG~PGi~laI~~p~~~~~Lves~~KK~~FL~~~~~~L~-----L~nv~v~~~R~E~~~---------- 128 (207)
T d1jsxa_ 64 LQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK-----LENIEPVQSRVEEFP---------- 128 (207)
T ss_dssp CCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT-----CSSEEEEECCTTTSC----------
T ss_pred hcCCceeeeeccCCceeeehhhhcccceEEEEecchHHHHHHHHHHHHcC-----Ccceeeeccchhhhc----------
Confidence 45679999999999999999987 4699999999866666665554433 256777766655431
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
...+||+|++--+ ..++.++.....+++++
T Consensus 129 --------------~~~~fD~V~sRA~----~~~~~ll~~~~~~l~~~ 158 (207)
T d1jsxa_ 129 --------------SEPPFDGVISRAF----ASLNDMVSWCHHLPGEQ 158 (207)
T ss_dssp --------------CCSCEEEEECSCS----SSHHHHHHHHTTSEEEE
T ss_pred --------------cccccceehhhhh----cCHHHHHHHHHHhcCCC
Confidence 1247999987533 45778888888888664
|
| >d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis, Ermc' [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: rRNA adenine dimethylase species: Bacillus subtilis, Ermc' [TaxId: 1423]
Probab=97.85 E-value=3.5e-05 Score=67.00 Aligned_cols=69 Identities=13% Similarity=0.116 Sum_probs=54.1
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
++.+.... ..-++.+|||+|||+|.....++..+++|++.|+++.+++.++.+... ..++.+...|..+
T Consensus 10 ~~~iv~~~---~~~~~d~VlEIGpG~G~LT~~Ll~~~~~v~avE~D~~l~~~l~~~~~~-------~~n~~i~~~D~l~ 78 (235)
T d1qama_ 10 IDKIMTNI---RLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD-------HDNFQVLNKDILQ 78 (235)
T ss_dssp HHHHHTTC---CCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT-------CCSEEEECCCGGG
T ss_pred HHHHHHhc---CCCCCCeEEEECCCchHHHHHHHhCcCceEEEeeccchHHHHHHHhhc-------ccchhhhhhhhhh
Confidence 34444442 445789999999999999999999999999999999999998876633 3577777776554
|
| >d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: Probable dimethyladenosine transferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.80 E-value=0.00016 Score=64.28 Aligned_cols=73 Identities=19% Similarity=0.145 Sum_probs=58.8
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++.+.... ..-++..|||+|+|+|.+...+++.+++|++.++++.+++.+++++..+.. ..++.+...|+.+.
T Consensus 10 ~~kIv~~~---~~~~~d~VlEIGPG~G~LT~~Ll~~~~~v~aiE~D~~l~~~L~~~~~~~~~----~~~~~~i~~D~l~~ 82 (278)
T d1zq9a1 10 INSIIDKA---ALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPV----ASKLQVLVGDVLKT 82 (278)
T ss_dssp HHHHHHHT---CCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTT----GGGEEEEESCTTTS
T ss_pred HHHHHHHh---CCCCCCEEEEECCCchHHHHHHHhcCCcEEEEEEccchhHHHHHHHhhhcc----ccchhhhHHHHhhh
Confidence 44455543 445678999999999999999999999999999999999999988865432 36788998888764
|
| >d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Isoflavone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=97.76 E-value=4.5e-05 Score=66.60 Aligned_cols=93 Identities=12% Similarity=0.142 Sum_probs=69.9
Q ss_pred CeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 122 IISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++|||+|+|+|..++.+++. ..++++.|+. ++++.+ . ...++++...|..++.
T Consensus 82 ~~vvDvGGG~G~~~~~l~~~~P~l~~~v~Dlp-~vi~~~-------~----~~~rv~~~~gD~f~~~------------- 136 (244)
T d1fp2a2 82 ESIVDVGGGTGTTAKIICETFPKLKCIVFDRP-QVVENL-------S----GSNNLTYVGGDMFTSI------------- 136 (244)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEECH-HHHTTC-------C----CBTTEEEEECCTTTCC-------------
T ss_pred eEEEEecCCccHHHHHHHHhCCCCeEEEecCH-HHHHhC-------c----ccCceEEEecCcccCC-------------
Confidence 68999999999999998887 5799999994 554321 1 1478999998876542
Q ss_pred cccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCC-eEEEEE
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSK-KVLYLA 252 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~-~~i~va 252 (330)
..+|+++...|+++-. ....+++.+.+.|++++. +.+++.
T Consensus 137 -------------p~aD~~~l~~vLHdw~d~~~~~iL~~~~~al~pgg~~~~lli~ 179 (244)
T d1fp2a2 137 -------------PNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTII 179 (244)
T ss_dssp -------------CCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred -------------CCCcEEEEEeecccCChHHHHHHHHHHHHHcCcccCCcEEEEE
Confidence 2579999999998744 445789999999988643 444443
|
| >d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase CheR, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Chemotaxis receptor methyltransferase CheR, C-terminal domain domain: Chemotaxis receptor methyltransferase CheR, C-terminal domain species: Salmonella typhimurium [TaxId: 90371]
Probab=97.74 E-value=3.9e-05 Score=64.53 Aligned_cols=39 Identities=8% Similarity=0.208 Sum_probs=30.5
Q ss_pred cCCeeEEEEeccccC--cccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 212 VQRASVLLAADVIYS--DDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 212 ~~~~DlIlaaDviY~--~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
..+||+|+|..|+.+ ++....+++.+.+.|++| +.+++.
T Consensus 130 ~~~fDvI~CRNVLiYf~~~~~~~vl~~l~~~L~pG--G~L~lG 170 (193)
T d1af7a2 130 PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPD--GLLFAG 170 (193)
T ss_dssp CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEE--EEEEEC
T ss_pred CCCccEEEeehhHHhcCHHHHHHHHHHHHHHhCCC--cEEEEe
Confidence 368999999999965 345578999999999775 566664
|
| >d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Chalcone O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=97.70 E-value=0.00015 Score=63.24 Aligned_cols=94 Identities=7% Similarity=0.044 Sum_probs=69.7
Q ss_pred CC-CCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FN-GIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~-g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
|. .++|||+|||+|..++.+++. ..++++-|+. .+++ .... ..++++...|+.++.
T Consensus 79 f~~~~~vlDiGGG~G~~~~~l~~~~P~l~~~v~Dlp-~vi~-------~~~~----~~ri~~~~gd~~~~~--------- 137 (244)
T d1fp1d2 79 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLP-QVIE-------NAPP----LSGIEHVGGDMFASV--------- 137 (244)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECH-HHHT-------TCCC----CTTEEEEECCTTTCC---------
T ss_pred ccCCcEEEEecCCCcHHHHHHHHHCCCCeEEEecch-hhhh-------ccCC----CCCeEEecCCccccc---------
Confidence 44 479999999999999999887 5789999984 5442 1111 478899988876542
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcc--cHHHHHHHHHHhccCCCCeEEEEE
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDD--LTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~--~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
...|+|+.+-|+++-. ....+++.+.+.|+++ +.+++.
T Consensus 138 -----------------p~~D~~~l~~vLh~~~de~~~~iL~~~~~aL~pg--g~llI~ 177 (244)
T d1fp1d2 138 -----------------PQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPN--GKVIIV 177 (244)
T ss_dssp -----------------CCEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEE--EEEEEE
T ss_pred -----------------ccceEEEEehhhhhCCHHHHHHHHHHHHHHcCCC--cEEEEE
Confidence 2459999999998854 4667899999999775 444444
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=97.66 E-value=4.1e-05 Score=69.36 Aligned_cols=102 Identities=14% Similarity=0.152 Sum_probs=72.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHH-ccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQL-NSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~-N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
+.++||.||.|.|.+...+.+. ..+|++.|+++.+++.+++.+.. |..... ..++++..-|+.+..
T Consensus 77 ~pk~VLiiG~G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~-d~rv~i~~~Da~~~l---------- 145 (312)
T d1uira_ 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD-DPRAVLVIDDARAYL---------- 145 (312)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG-CTTEEEEESCHHHHH----------
T ss_pred CcceEEEeCCCchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccC-CCceEEEEchHHHHh----------
Confidence 4689999999999888777766 36999999999999999988743 332222 467788777765431
Q ss_pred ccccccccCccchhccCCeeEEEE--eccccCcc-----cHHHHHHHHHHhccCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLA--ADVIYSDD-----LTDALFHTLKRLMPLG 244 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIla--aDviY~~~-----~~~~l~~tl~~lL~~~ 244 (330)
.....+||+|+. .|...... ....+++.+++.|+++
T Consensus 146 ------------~~~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~ 188 (312)
T d1uira_ 146 ------------ERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG 188 (312)
T ss_dssp ------------HHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE
T ss_pred ------------hhcCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC
Confidence 012357999993 33333221 3578999999999775
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.64 E-value=7.8e-05 Score=69.12 Aligned_cols=106 Identities=18% Similarity=0.121 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCC----------CCeeEEEEecCCCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSH----------QGSVHVRDLNWMNPW 186 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~----------~~~v~v~~ldW~~~~ 186 (330)
+++++|||..||||+-||-.|+. +.+|++.|+++.+++.+++|+++|+..... ...+.+...|+...
T Consensus 44 ~~~~~vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~- 122 (375)
T d2dula1 44 LNPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRL- 122 (375)
T ss_dssp HCCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHH-
T ss_pred hCCCEEEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhh-
Confidence 46789999999999999977764 368999999999999999999999753210 11233333332211
Q ss_pred CCCccCCCCCccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCCCCeEEEEE
Q 020158 187 PPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLGSKKVLYLA 252 (330)
Q Consensus 187 ~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~~~~~i~va 252 (330)
.......||+|.. |. | ....++++..-+.++.+ +++.+.
T Consensus 123 ---------------------~~~~~~~fDvIDi-DP-f--Gs~~pfldsAi~a~~~~--Gll~vT 161 (375)
T d2dula1 123 ---------------------MAERHRYFHFIDL-DP-F--GSPMEFLDTALRSAKRR--GILGVT 161 (375)
T ss_dssp ---------------------HHHSTTCEEEEEE-CC-S--SCCHHHHHHHHHHEEEE--EEEEEE
T ss_pred ---------------------hHhhcCcCCcccC-CC-C--CCcHHHHHHHHHHhccC--CEEEEE
Confidence 0112357997764 33 2 34567888777777643 566664
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.48 E-value=7.1e-05 Score=66.51 Aligned_cols=102 Identities=10% Similarity=0.114 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCC-----CCCCeeEEEEecCCCCCCCCccC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVF-----SHQGSVHVRDLNWMNPWPPIFSL 192 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~-----~~~~~v~v~~ldW~~~~~~~~~~ 192 (330)
-+.++||-||.|.|.+...+.+. ..+|++.|+++.+++.+++-...+.... ....++++..-|....
T Consensus 71 ~~p~~vLiiG~G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~------- 143 (276)
T d1mjfa_ 71 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEF------- 143 (276)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHH-------
T ss_pred CCCceEEEecCCchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHH-------
Confidence 35689999999999888777666 3689999999999999987554432110 0135677666553221
Q ss_pred CCCCccccccccCccchhccCCeeEEEEeccccCcc-----cHHHHHHHHHHhccCC
Q 020158 193 GNSSASQERYSWNSSELKEVQRASVLLAADVIYSDD-----LTDALFHTLKRLMPLG 244 (330)
Q Consensus 193 ~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~-----~~~~l~~tl~~lL~~~ 244 (330)
+...++||+|| .|+.-... ....+++.+++.|+++
T Consensus 144 ----------------l~~~~~yDvIi-~D~~~~~~~~~~L~t~eF~~~~~~~L~~~ 183 (276)
T d1mjfa_ 144 ----------------IKNNRGFDVII-ADSTDPVGPAKVLFSEEFYRYVYDALNNP 183 (276)
T ss_dssp ----------------HHHCCCEEEEE-EECCCCC-----TTSHHHHHHHHHHEEEE
T ss_pred ----------------HhccCCCCEEE-EeCCCCCCCcccccCHHHHHhhHhhcCCC
Confidence 22346899998 45543222 2467899999999765
|
| >d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: rRNA adenine dimethylase species: Streptococcus pneumoniae, Ermam [TaxId: 1313]
Probab=97.42 E-value=1.3e-05 Score=70.26 Aligned_cols=62 Identities=13% Similarity=0.163 Sum_probs=48.3
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
..-.+.+|||+|||+|.+...+++.+++|++.|+++.+++.++.+... ..++.+...|..+.
T Consensus 26 ~~~~~d~VLEIGpG~G~LT~~L~~~~~~v~aIE~D~~l~~~l~~~~~~-------~~n~~ii~~D~l~~ 87 (245)
T d1yuba_ 26 NLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKL-------NTRVTLIHQDILQF 87 (245)
T ss_dssp CCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTT-------CSEEEECCSCCTTT
T ss_pred CCCCCCeEEEECCCccHHHHHHHhhcCceeEeeecccchhhhhhhhhh-------ccchhhhhhhhhcc
Confidence 344678999999999988888999999999999998887766544421 35778777776653
|
| >d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=97.37 E-value=0.0007 Score=58.52 Aligned_cols=91 Identities=11% Similarity=0.045 Sum_probs=65.9
Q ss_pred CCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCcc
Q 020158 121 GIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSAS 198 (330)
Q Consensus 121 g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~ 198 (330)
.++|||+|||+|..++.+++. ..++++.|+. .+++ ... ...++.....|+.++.|
T Consensus 82 ~~~vvDvGGG~G~~~~~l~~~~P~l~~~v~Dlp-~vi~-------~~~----~~~r~~~~~~d~~~~~P----------- 138 (243)
T d1kyza2 82 LKSLVDVGGGTGAVINTIVSKYPTIKGINFDLP-HVIE-------DAP----SYPGVEHVGGDMFVSIP----------- 138 (243)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEECT-TTTT-------TCC----CCTTEEEEECCTTTCCC-----------
T ss_pred CcEEEEecCCCcHHHHHHHHHCCCCeEEEcccH-Hhhh-------hcc----cCCceEEecccccccCC-----------
Confidence 478999999999999999987 5799999996 3332 111 14678888888876422
Q ss_pred ccccccCccchhccCCeeEEEEeccccCc--ccHHHHHHHHHHhccCCCCeEE
Q 020158 199 QERYSWNSSELKEVQRASVLLAADVIYSD--DLTDALFHTLKRLMPLGSKKVL 249 (330)
Q Consensus 199 ~~~~~w~~~~~~~~~~~DlIlaaDviY~~--~~~~~l~~tl~~lL~~~~~~~i 249 (330)
..|+++..-++++. +....+++.+.+.|++++...+
T Consensus 139 ---------------~ad~~~l~~vlh~~~d~~~~~iL~~~~~al~pgg~~li 176 (243)
T d1kyza2 139 ---------------KADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIV 176 (243)
T ss_dssp ---------------CCSCEECSSSSTTSCHHHHHHHHHHHHHHCCSSSCEEE
T ss_pred ---------------CcceEEEEEEeecCCHHHHHHHHHHHHHhcCCCceEEE
Confidence 24556667777664 4677789999999988754433
|
| >d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glucose-inhibited division protein B (GidB) domain: Glucose-inhibited division protein B (GidB) species: Bacillus subtilis [TaxId: 1423]
Probab=97.34 E-value=0.00042 Score=60.06 Aligned_cols=96 Identities=11% Similarity=-0.033 Sum_probs=63.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
.+.+|+|+|+|.|++||.+|-. ..+|++.|-+..=...++.-+..-+ ..++.+..-...+....
T Consensus 70 ~~~~ilDiGSGaGfPGi~laI~~p~~~v~Lves~~KK~~FL~~v~~~L~-----L~n~~i~~~R~E~~~~~--------- 135 (239)
T d1xdza_ 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ-----LENTTFCHDRAETFGQR--------- 135 (239)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT-----CSSEEEEESCHHHHTTC---------
T ss_pred CCCeEEeecCCCchHHHHHHHhCCCccceeecchHHHHHHHHHHHHHhC-----CCCcEEEeehhhhcccc---------
Confidence 4679999999999999999986 5799999999754444443333322 13445443322211000
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
.+...+||+|+|-- ...+..++.....+++++
T Consensus 136 -----------~~~~~~~D~v~sRA----va~l~~ll~~~~~~l~~~ 167 (239)
T d1xdza_ 136 -----------KDVRESYDIVTARA----VARLSVLSELCLPLVKKN 167 (239)
T ss_dssp -----------TTTTTCEEEEEEEC----CSCHHHHHHHHGGGEEEE
T ss_pred -----------ccccccceEEEEhh----hhCHHHHHHHHhhhcccC
Confidence 01235899999863 347788999999999764
|
| >d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: High level kasugamycin resistance protein KsgA species: Escherichia coli [TaxId: 562]
Probab=97.29 E-value=0.00011 Score=64.40 Aligned_cols=69 Identities=10% Similarity=0.090 Sum_probs=52.6
Q ss_pred HHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 106 ADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 106 a~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
++.|.... ....+..|||+|||+|.+...++..+++|++.|+++.+++.++..... ..++.+...|..+
T Consensus 10 ~~~Iv~~~---~~~~~d~vlEIGpG~G~LT~~Ll~~~~~v~aiEiD~~l~~~L~~~~~~-------~~~~~ii~~D~l~ 78 (252)
T d1qyra_ 10 IDSIVSAI---NPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFL-------GPKLTIYQQDAMT 78 (252)
T ss_dssp HHHHHHHH---CCCTTCCEEEECCTTTTTHHHHHTTCSCEEEECCCHHHHHHHHTCTTT-------GGGEEEECSCGGG
T ss_pred HHHHHHhc---CCCCCCEEEEECCCchHHHHHHHccCCceEEEEeccchhHHHHHHhhh-------ccchhHHhhhhhh
Confidence 34444443 345688999999999999989999999999999999999998864322 3567777776554
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=97.24 E-value=0.00015 Score=64.93 Aligned_cols=101 Identities=14% Similarity=0.098 Sum_probs=70.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+.++||-||.|.|.+.-.+.+. ..+|++.|+++.+++.+++-+..|...+. ..++++..-|......
T Consensus 89 ~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~-d~rv~v~~~Da~~~l~---------- 157 (295)
T d1inla_ 89 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFD-DPRAEIVIANGAEYVR---------- 157 (295)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGG-CTTEEEEESCHHHHGG----------
T ss_pred CCceEEEecCCchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhccccc-CCCcEEEhhhHHHHHh----------
Confidence 4689999999999887777766 36899999999999999987766543222 4667777666443210
Q ss_pred cccccccCccchhccCCeeEEEEecccc---Cc---ccHHHHHHHHHHhccCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIY---SD---DLTDALFHTLKRLMPLG 244 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY---~~---~~~~~l~~tl~~lL~~~ 244 (330)
....+||+|+. |+.- .+ -....+++.+++.|+++
T Consensus 158 ------------~~~~~yDvIi~-D~~dp~~~~~~~L~t~efy~~~~~~L~~~ 197 (295)
T d1inla_ 158 ------------KFKNEFDVIII-DSTDPTAGQGGHLFTEEFYQACYDALKED 197 (295)
T ss_dssp ------------GCSSCEEEEEE-EC----------CCSHHHHHHHHHHEEEE
T ss_pred ------------cCCCCCCEEEE-cCCCCCcCchhhhccHHHHHHHHhhcCCC
Confidence 12357999994 3322 11 13678999999999764
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=97.07 E-value=0.0006 Score=60.25 Aligned_cols=106 Identities=13% Similarity=0.121 Sum_probs=74.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+.++||-||-|.|.+.-.+.+. ..+|++.|+++.+++.+++....|....+ ..++++..-|.....
T Consensus 75 ~p~~vLiiGgG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~-d~r~~i~~~D~~~~l----------- 142 (274)
T d1iy9a_ 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLD-DPRVDVQVDDGFMHI----------- 142 (274)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTT-STTEEEEESCSHHHH-----------
T ss_pred CcceEEecCCCCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhccccc-CCCeEEEechHHHHH-----------
Confidence 4589999999999998888876 46999999999999999988776654333 467777766533210
Q ss_pred cccccccCccchhccCCeeEEEEe--ccccCc--ccHHHHHHHHHHhccCCCCeEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAA--DVIYSD--DLTDALFHTLKRLMPLGSKKVLY 250 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaa--DviY~~--~~~~~l~~tl~~lL~~~~~~~i~ 250 (330)
.....+||+|+.- |-.... =....+++.+++.|+++ +++.
T Consensus 143 -----------~~~~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~--Gv~v 186 (274)
T d1iy9a_ 143 -----------AKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED--GIFV 186 (274)
T ss_dssp -----------HTCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE--EEEE
T ss_pred -----------hhcCCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC--ceEE
Confidence 0123579999842 111111 13778999999999764 4444
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.96 E-value=0.00057 Score=60.93 Aligned_cols=107 Identities=12% Similarity=0.060 Sum_probs=72.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHh-C-CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV-A-WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~-~-~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
+.++||-||-|.|.+.-.+.+. . .+|++.|+++.+++.+++-...+..... ..++++..-|..+....
T Consensus 80 ~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~-~~r~~i~~~Da~~~l~~--------- 149 (290)
T d1xj5a_ 80 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE-DPRVNLVIGDGVAFLKN--------- 149 (290)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG-STTEEEEESCHHHHHHT---------
T ss_pred CCcceEEecCCchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhcccc-CCCcEEEEccHHHHHhh---------
Confidence 4589999999999888888776 3 6899999999999999987654432222 46677666553321000
Q ss_pred cccccccCccchhccCCeeEEEEeccccCc-----ccHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSD-----DLTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~-----~~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
....+||+||. |+.-.. -....+++.+++.|+++ +++.+
T Consensus 150 ------------~~~~~yDvIi~-D~~dp~~~~~~L~t~eF~~~~~~~L~~~--Gi~v~ 193 (290)
T d1xj5a_ 150 ------------AAEGSYDAVIV-DSSDPIGPAKELFEKPFFQSVARALRPG--GVVCT 193 (290)
T ss_dssp ------------SCTTCEEEEEE-CCCCTTSGGGGGGSHHHHHHHHHHEEEE--EEEEE
T ss_pred ------------ccccCccEEEE-cCCCCCCcchhhCCHHHHHHHHHhcCCC--cEEEE
Confidence 01247999995 544211 14677999999999764 44444
|
| >d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: DNA methylase TaqI, N-terminal domain domain: DNA methylase TaqI, N-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=96.93 E-value=0.0013 Score=55.00 Aligned_cols=48 Identities=17% Similarity=0.104 Sum_probs=34.6
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHH
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYIL 155 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L 155 (330)
++++|+... ..-++.+|||.|||+|-..+.+... ...+++.|+++..+
T Consensus 7 i~~~m~~l~---~~~~~~~IlDp~~G~G~fl~~~~~~~~~~~~i~g~ei~~~~~ 57 (223)
T d2ih2a1 7 VVDFMVSLA---EAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKAL 57 (223)
T ss_dssp HHHHHHHHC---CCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTC
T ss_pred HHHHHHHhc---CCCCcCEEEECCCchHHHHHHHHHhccccceEEeeecCHHHH
Confidence 566666653 3457889999999999655555443 46899999997543
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.0005 Score=61.15 Aligned_cols=106 Identities=12% Similarity=0.072 Sum_probs=71.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++||-||.|.|.+.-.+.+. ..+|++.|+++.+++.+++-...|..... ..++++..-|.....
T Consensus 78 ~pk~vLiiGgG~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~-d~rv~i~~~Da~~~l----------- 145 (285)
T d2o07a1 78 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS-SSKLTLHVGDGFEFM----------- 145 (285)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG-CTTEEEEESCHHHHH-----------
T ss_pred CcCeEEEeCCCchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccC-CCCceEEEccHHHHH-----------
Confidence 5689999999999888888776 47999999999999999987655432222 467777766633210
Q ss_pred cccccccCccchhccCCeeEEEEeccccCcc-----cHHHHHHHHHHhccCCCCeEEEE
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYSDD-----LTDALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~-----~~~~l~~tl~~lL~~~~~~~i~v 251 (330)
....++||+|+. |+.-... ....+++.+++.|+++ +++.+
T Consensus 146 -----------~~~~~~yDvIi~-D~~~p~~~~~~L~t~eF~~~~~~~L~~~--Gi~v~ 190 (285)
T d2o07a1 146 -----------KQNQDAFDVIIT-DSSDPMGPAESLFKESYYQLMKTALKED--GVLCC 190 (285)
T ss_dssp -----------HTCSSCEEEEEE-ECC-----------CHHHHHHHHHEEEE--EEEEE
T ss_pred -----------hcCCCCCCEEEE-cCCCCCCcccccccHHHHHHHHHhcCCC--CeEEE
Confidence 012358999996 5432111 3456789999999764 44443
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=96.89 E-value=0.00087 Score=56.03 Aligned_cols=62 Identities=13% Similarity=0.103 Sum_probs=49.0
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
....|..+||.+||+|-.+..++.. ..+|++.|.++++++.++.+..... .++.+...++.+
T Consensus 20 ~~~~~~~~lD~t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~------~r~~~~~~~f~~ 83 (192)
T d1m6ya2 20 KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS------DRVSLFKVSYRE 83 (192)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT------TTEEEEECCGGG
T ss_pred CCCCCCEEEEecCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhcccc------ccccchhHHHhh
Confidence 3457889999999999777776665 5789999999999999999987653 456766665543
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.74 E-value=0.00093 Score=60.03 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=66.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCc
Q 020158 120 NGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSA 197 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~ 197 (330)
..++||-||.|.|.+.-.+.+.. .+|++.|+++.+++.+++-...|..... ..++++..-|.....
T Consensus 106 ~pk~VLIiGgG~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~-dprv~i~i~Da~~~l----------- 173 (312)
T d2b2ca1 106 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFS-HPKLDLFCGDGFEFL----------- 173 (312)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGG-CTTEEEECSCHHHHH-----------
T ss_pred CCCeEEEeCCCchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccC-CCCeEEEEchHHHHH-----------
Confidence 45799999999998888888763 6999999999999999987655432222 355666554422210
Q ss_pred cccccccCccchhccCCeeEEEEeccccC---c--ccHHHHHHHHHHhccCC
Q 020158 198 SQERYSWNSSELKEVQRASVLLAADVIYS---D--DLTDALFHTLKRLMPLG 244 (330)
Q Consensus 198 ~~~~~~w~~~~~~~~~~~DlIlaaDviY~---~--~~~~~l~~tl~~lL~~~ 244 (330)
.....+||+||. |+.-. . -....|++.+++.|+++
T Consensus 174 -----------~~~~~~yDvII~-D~~dp~~~~~~L~t~eFy~~~~~~L~~~ 213 (312)
T d2b2ca1 174 -----------KNHKNEFDVIIT-DSSDPVGPAESLFGQSYYELLRDALKED 213 (312)
T ss_dssp -----------HHCTTCEEEEEE-CCC-------------HHHHHHHHEEEE
T ss_pred -----------HhCCCCCCEEEE-cCCCCCCcchhhhhHHHHHHHHhhcCCC
Confidence 012457999995 43211 1 14677889999999764
|
| >d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: NOL1R species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.50 E-value=0.0088 Score=52.85 Aligned_cols=61 Identities=13% Similarity=0.097 Sum_probs=49.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
..|.+|||+.||.|-=++.+|.+ ...|++.|.++.=+..++.|+...+. .++.+...|...
T Consensus 93 ~~g~~vLD~cAapGgKt~~la~l~~~~~~i~a~d~~~~R~~~l~~~l~r~g~-----~~~~~~~~d~~~ 156 (293)
T d2b9ea1 93 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-----SCCELAEEDFLA 156 (293)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----CSEEEEECCGGG
T ss_pred CccceEEecccchhhHHHHHHHHhcCCceEeeecCCHHHHHHHHHHHHhcCc-----cceeeeehhhhh
Confidence 56889999999999877766654 46899999999999999999999873 567777666544
|
| >d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M protein {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N-6 DNA Methylase-like domain: Type I restriction enzyme StySJI M protein species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=96.36 E-value=0.014 Score=54.09 Aligned_cols=137 Identities=12% Similarity=0.079 Sum_probs=84.9
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---------------CCeEEEEeCchHHHHHHHHHHHHccCCC
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---------------AWTVFLTDHGNYILDNCAKNVQLNSGVF 169 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---------------~~~V~~TD~~~~~L~~~~~Nv~~N~~~~ 169 (330)
++++|.... ....+.+|+|-.||+|-.-+.+..+ ...+++.|+++.+...++.|+.+++...
T Consensus 150 Iv~~mv~ll---~~~~~~~IlDPacGsG~fL~~a~~~~~~~~~~~~~~~~~~~~~l~g~E~~~~~~~la~~n~~l~g~~~ 226 (425)
T d2okca1 150 LIQAMVDCI---NPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT 226 (425)
T ss_dssp HHHHHHHHH---CCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred hhHhhheec---cCcccceeeccccccCccHHHHHHHHHhhccchhhhhhhhhhhhhhhhccHHHHHHHHhhhhhcCCcc
Confidence 345555543 2345789999999999777666654 1359999999999999999999876432
Q ss_pred CCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccC-----------------cccHHH
Q 020158 170 SHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYS-----------------DDLTDA 232 (330)
Q Consensus 170 ~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~-----------------~~~~~~ 232 (330)
....+..-|+.... ...+||+||+.-.+=. ....-.
T Consensus 227 ---~~~~i~~~d~l~~~------------------------~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~~~~~~~~ 279 (425)
T d2okca1 227 ---DRSPIVCEDSLEKE------------------------PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLN 279 (425)
T ss_dssp ---SCCSEEECCTTTSC------------------------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHH
T ss_pred ---ccceeecCchhhhh------------------------cccccceEEecCCCCCCccccchhhhhhcccccccHHHH
Confidence 22333333333221 2357999998766511 112346
Q ss_pred HHHHHHHhccCCCCeEEEEEeeeeCcccccchhhhccccchhhhhhhh
Q 020158 233 LFHTLKRLMPLGSKKVLYLALEKRYNFSLNDLDVVANGYSHFRSYIME 280 (330)
Q Consensus 233 l~~tl~~lL~~~~~~~i~va~~~R~~f~~~~~d~v~~~y~~f~~~l~~ 280 (330)
++..+..+|++++...+++. ...-|. ...+..+|.+|..
T Consensus 280 Fi~~~~~~Lk~~G~~~iI~p--~~~L~~-------~~~~~~iR~~Ll~ 318 (425)
T d2okca1 280 FLQHMMLMLKTGGRAAVVLP--DNVLFE-------AGAGETIRKRLLQ 318 (425)
T ss_dssp HHHHHHHHEEEEEEEEEEEE--HHHHHC-------STHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeEEEEec--hHHhhh-------hhhHHHHHHHHHH
Confidence 88888889988765555543 221111 1124567788764
|
| >d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.82 E-value=0.019 Score=50.34 Aligned_cols=49 Identities=24% Similarity=0.124 Sum_probs=42.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCchHHHHHHHHHHHHccC
Q 020158 119 FNGIISLELGAGTGLAGILLSRVA--WTVFLTDHGNYILDNCAKNVQLNSG 167 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~~~~L~~~~~Nv~~N~~ 167 (330)
..|.+|||+.||.|-=++.+|..+ ..|++.|.++.=+..++.|+...+.
T Consensus 101 ~~g~~vLD~CAaPGgKt~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~ 151 (284)
T d1sqga2 101 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM 151 (284)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC
T ss_pred cccceeEeccCccccchhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccc
Confidence 568899999999997777777664 5799999999999999999988763
|
| >d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella flexneri [TaxId: 623]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhiQ-like domain: Hypothetical protein YhiQ species: Shigella flexneri [TaxId: 623]
Probab=95.16 E-value=0.012 Score=50.89 Aligned_cols=44 Identities=14% Similarity=0.141 Sum_probs=39.9
Q ss_pred CeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHc
Q 020158 122 IISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLN 165 (330)
Q Consensus 122 ~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N 165 (330)
.+|||+-||.|--|+++|..|.+|++.+.+|.+..+++.|+...
T Consensus 90 ~~VlD~TaGlG~Da~vlA~~G~~V~~iEr~p~l~~ll~d~l~r~ 133 (250)
T d2oyra1 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARG 133 (250)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHH
T ss_pred CEEEECCCcccHHHHHHHhCCCEEEEEccCHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999998888888777654
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=94.77 E-value=0.019 Score=46.55 Aligned_cols=94 Identities=17% Similarity=0.065 Sum_probs=62.8
Q ss_pred CCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCC
Q 020158 119 FNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSS 196 (330)
Q Consensus 119 ~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~ 196 (330)
.+..+|+=||+|+ |+-++..|+. |+.|++.|.+++.++.++.-...+ +.....+ .
T Consensus 30 v~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~---------~~~~~~~---~----------- 86 (168)
T d1pjca1 30 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR---------VELLYSN---S----------- 86 (168)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG---------SEEEECC---H-----------
T ss_pred CCCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc---------ceeehhh---h-----------
Confidence 4678999999996 8888887765 999999999999888777544322 2221111 0
Q ss_pred ccccccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccCC
Q 020158 197 ASQERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPLG 244 (330)
Q Consensus 197 ~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~~ 244 (330)
+...+.....|+||++=.+--.....-+-+.+-+.|+++
T Consensus 87 ---------~~l~~~~~~aDivI~aalipG~~aP~lIt~~mv~~Mk~G 125 (168)
T d1pjca1 87 ---------AEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTG 125 (168)
T ss_dssp ---------HHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTT
T ss_pred ---------hhHHHhhccCcEEEEeeecCCcccCeeecHHHHhhcCCC
Confidence 000123457999999977665555444556666677654
|
| >d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N-6 DNA Methylase-like domain: M.EcoKI species: Escherichia coli [TaxId: 562]
Probab=94.67 E-value=0.049 Score=51.69 Aligned_cols=122 Identities=11% Similarity=0.019 Sum_probs=73.9
Q ss_pred HHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh--------------------CCeEEEEeCchHHHHHHHHHHHH
Q 020158 105 LADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV--------------------AWTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 105 La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~--------------------~~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
++++|.... ....+.+|+|-.||+|-.-+.+... ...+++.|+++.+...++.|+.+
T Consensus 152 Iv~~mv~ll---~~~~~~~i~DPacGsG~fL~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~G~E~~~~~~~la~~nl~l 228 (524)
T d2ar0a1 152 LIKTIIHLL---KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL 228 (524)
T ss_dssp HHHHHHHHH---CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT
T ss_pred hhHhhhhcc---cCccchhhcchhhhcchhhHHHHHHHHHhcCcccccchhHHHHHHHhhhhhhccCHHHHHHHHHHHHh
Confidence 456666553 3356779999999999766665553 12689999999999999999988
Q ss_pred ccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccccccccCccchhccCCeeEEEEeccccCc--------------ccH
Q 020158 165 NSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQERYSWNSSELKEVQRASVLLAADVIYSD--------------DLT 230 (330)
Q Consensus 165 N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~--------------~~~ 230 (330)
++........-.. .+++.. ..+.....+||+||+.-.+-.. ...
T Consensus 229 ~~~~~~i~~~~~~---~~~~~l-------------------~~d~~~~~kfD~Ii~NPPfg~~~~~~~~~~~~~~~~~~~ 286 (524)
T d2ar0a1 229 HDIEGNLDHGGAI---RLGNTL-------------------GSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQ 286 (524)
T ss_dssp TTCCCBGGGTBSE---EESCTT-------------------SHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHH
T ss_pred hcccccccccchh---hhhhhh-------------------hhcccccccceeEEecCCccccccccchhhhcccccccc
Confidence 7632100000000 001100 0011234579999998755221 123
Q ss_pred HHHHHHHHHhccCCCCeEEEE
Q 020158 231 DALFHTLKRLMPLGSKKVLYL 251 (330)
Q Consensus 231 ~~l~~tl~~lL~~~~~~~i~v 251 (330)
-.|+..+-++|+++|...+++
T Consensus 287 ~~Fi~~~l~~Lk~gGr~aiIl 307 (524)
T d2ar0a1 287 LCFMQHIIETLHPGGRAAVVV 307 (524)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHhccccCcEEEEE
Confidence 357888888888875555555
|
| >d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CmcI-like domain: Cephalosporin hydroxylase CmcI species: Streptomyces clavuligerus [TaxId: 1901]
Probab=94.59 E-value=0.038 Score=46.97 Aligned_cols=75 Identities=13% Similarity=0.107 Sum_probs=47.8
Q ss_pred cCeEeechHHHHHHH--HhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh------CCeEEEEeCchHHHHHHHHHHHHc
Q 020158 94 VGLQVWKAELVLADF--VMHKMCTSSDFNGIISLELGAGTGLAGILLSRV------AWTVFLTDHGNYILDNCAKNVQLN 165 (330)
Q Consensus 94 ~G~~vW~aa~~La~~--l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~------~~~V~~TD~~~~~L~~~~~Nv~~N 165 (330)
-|..+|..-..++-| |.. ..+.++|||+|++.|...+.+|.. ..+|++.|+++..... ..+
T Consensus 58 ~G~p~~k~p~d~~~~~eli~------~~KPk~ILEIGv~~GgS~~~~a~~l~~~~~~~kI~giDId~~~~~~-----~~~ 126 (232)
T d2bm8a1 58 RGLRMLKDPDTQAVYHDMLW------ELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQI-----PAS 126 (232)
T ss_dssp TTEECCSCHHHHHHHHHHHH------HHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCC-----CGG
T ss_pred cceecccCHHHHHHHHHHHH------HhCCCEEEEECCCCchHHHHHHHHHHhcCCCceEEecCcChhhhhh-----hhc
Confidence 377777666655544 332 257889999999999777766643 3689999997532211 011
Q ss_pred cCCCCCCCeeEEEEecCCC
Q 020158 166 SGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 166 ~~~~~~~~~v~v~~ldW~~ 184 (330)
. ..++.+...|-.+
T Consensus 127 ~-----~~~I~~i~gDs~~ 140 (232)
T d2bm8a1 127 D-----MENITLHQGDCSD 140 (232)
T ss_dssp G-----CTTEEEEECCSSC
T ss_pred c-----ccceeeeeccccc
Confidence 1 3567777766443
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.30 E-value=0.042 Score=43.79 Aligned_cols=44 Identities=18% Similarity=0.210 Sum_probs=36.1
Q ss_pred CCCCCCeEEEEcCc-cCHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAG-TGLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~G-tGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||-+|+| .|+..+.+|+. |.+|+++|.+++-++.+++
T Consensus 24 ~~~~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~ 69 (168)
T d1piwa2 24 GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK 69 (168)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred CcCCCCEEEEECCCCcchhHHHHhhhccccccccccchhHHHHhhc
Confidence 45678999999999 48888877765 8899999999887777764
|
| >d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Hypothetical methyltransferase PH1374 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.86 E-value=0.18 Score=44.38 Aligned_cols=49 Identities=16% Similarity=0.120 Sum_probs=41.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCchHHHHHHHHHHHHccC
Q 020158 119 FNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGNYILDNCAKNVQLNSG 167 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~~~L~~~~~Nv~~N~~ 167 (330)
..|.+|||+.||.|-=++.++.. ...|++.|.++.-+..++.|+...+.
T Consensus 115 ~~g~~vlD~CAapGgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~ 166 (313)
T d1ixka_ 115 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV 166 (313)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC
T ss_pred CccceeeecccchhhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHh
Confidence 57889999999999877777655 35799999999999999999988763
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=93.52 E-value=0.086 Score=42.29 Aligned_cols=44 Identities=25% Similarity=0.383 Sum_probs=35.2
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-C-CeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-A-WTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~-~~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||=+|||. |+..+.+|+. | .+|+++|.+++-++.+++
T Consensus 25 ~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~ 71 (182)
T d1vj0a2 25 ESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 71 (182)
T ss_dssp SCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCccchhheeccccccccccccccccccccccccc
Confidence 345789999999984 7777777776 5 489999999988887764
|
| >d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA adenine dimethylase-like domain: Transcription factor sc-mtTFB species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.42 E-value=0.054 Score=48.20 Aligned_cols=44 Identities=11% Similarity=0.135 Sum_probs=37.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh--CCeEEEEeCchHHHHHHHHHH
Q 020158 119 FNGIISLELGAGTGLAGILLSRV--AWTVFLTDHGNYILDNCAKNV 162 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~gl~lA~~--~~~V~~TD~~~~~L~~~~~Nv 162 (330)
.++.+|||+|.|.|..+..+... .++|++.+.++...+.++...
T Consensus 42 ~~~~~VlEIGPG~G~LT~~Ll~~~~~~~v~~iE~D~~~~~~L~~~~ 87 (322)
T d1i4wa_ 42 PEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF 87 (322)
T ss_dssp TTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT
T ss_pred cCCCeEEEECCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHhc
Confidence 45779999999999888887765 368999999999999887654
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.40 E-value=0.11 Score=40.76 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=35.2
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||=+|||. |+..+.+|+. |.+|+++|.+++-++.+++
T Consensus 24 ~~~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~ 69 (166)
T d1llua2 24 NARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARK 69 (166)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHHhhhc
Confidence 345688999999985 7777777776 7899999999887777653
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=92.71 E-value=0.12 Score=42.29 Aligned_cols=44 Identities=27% Similarity=0.232 Sum_probs=35.9
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh--CCeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV--AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~--~~~V~~TD~~~~~L~~~~~ 160 (330)
..-.|.+||-+|||. |+..+.+|+. +.+|+++|.++.-++.+++
T Consensus 22 ~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~ 68 (195)
T d1kola2 22 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 68 (195)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhh
Confidence 456789999999997 7888877765 4589999999988887764
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=92.60 E-value=0.081 Score=41.81 Aligned_cols=44 Identities=25% Similarity=0.289 Sum_probs=35.2
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
....|.+||=+|||. |+..+.+|+. |++|+++|.+++-++.+++
T Consensus 23 ~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~ 68 (170)
T d1e3ja2 23 GVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN 68 (170)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEEcccccchhhHhhHhhhcccccccchHHHHHHHHHH
Confidence 345788999999984 7777777765 7899999999887777764
|
| >d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA methyltransferase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Type II DNA methylase domain: m.RsrI N6 adenosine-specific DNA methyltransferase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=92.35 E-value=0.14 Score=43.23 Aligned_cols=58 Identities=14% Similarity=0.220 Sum_probs=50.2
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHH
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQL 164 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~ 164 (330)
+.|.+++.... ..+|..|||-=||+|-+++++.+.|.+.++.|+++...+.+++++..
T Consensus 194 ~~L~~~~I~~~----s~~gdiVLDpF~GSGTT~~Aa~~lgR~~ig~El~~~y~~~a~~Ri~~ 251 (279)
T d1eg2a_ 194 AAVIERLVRAL----SHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTF 251 (279)
T ss_dssp HHHHHHHHHHH----SCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHH
T ss_pred hhHHHHHHHhh----cCCCCEEEecCCCCcHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHHH
Confidence 45677766652 35788999999999999999999999999999999999999988865
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.23 E-value=0.24 Score=42.18 Aligned_cols=64 Identities=16% Similarity=0.156 Sum_probs=46.7
Q ss_pred CCCCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 116 SSDFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 116 ~~~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
|..++||+||=-|++.|+ ++..+|+.|.+|++++.+++-++.+...+.... ...+.....|-.+
T Consensus 9 ~~~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-----~~~~~~~~~d~~~ 75 (269)
T d1xu9a_ 9 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-----AASAHYIAGTMED 75 (269)
T ss_dssp GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-----CSEEEEEECCTTC
T ss_pred ccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-----cccchhhhhhhhh
Confidence 455899999999999883 344455568999999999988888877665544 3566666666443
|
| >d1g60a_ c.66.1.11 (A:) Methyltransferase mboII {Moraxella bovis [TaxId: 476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Type II DNA methylase domain: Methyltransferase mboII species: Moraxella bovis [TaxId: 476]
Probab=92.09 E-value=0.18 Score=41.92 Aligned_cols=57 Identities=11% Similarity=0.105 Sum_probs=48.9
Q ss_pred HHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHH
Q 020158 103 LVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQ 163 (330)
Q Consensus 103 ~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~ 163 (330)
+.|.+++.... ..+|..|||-=||+|-+++++.+.+.+.++.|++++-++.+++++.
T Consensus 199 ~~L~~~lI~~~----s~~gd~VlDpF~GSGTT~~aa~~~~R~~ig~El~~~y~~~a~~Rl~ 255 (256)
T d1g60a_ 199 RDLIERIIRAS----SNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLN 255 (256)
T ss_dssp HHHHHHHHHHH----CCTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHh----CCCCCEEEECCCCchHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHc
Confidence 45666666552 3678899999999999999999999999999999999999998874
|
| >d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: RNA methyltransferase FtsJ domain: RNA methyltransferase FtsJ species: Escherichia coli [TaxId: 562]
Probab=90.90 E-value=0.28 Score=39.60 Aligned_cols=50 Identities=16% Similarity=0.087 Sum_probs=36.9
Q ss_pred chHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---CCeEEEEeCch
Q 020158 100 KAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---AWTVFLTDHGN 152 (330)
Q Consensus 100 ~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---~~~V~~TD~~~ 152 (330)
+|+.-|.+-.... .-.-++.+||||||+.|-.+.+++.. ...|++.|+.+
T Consensus 5 RaafKL~EI~~k~---~l~k~~~~vlDLg~aPGgw~q~~~~~~~~~~~v~~vDl~~ 57 (180)
T d1ej0a_ 5 RAWFKLDEIQQSD---KLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP 57 (180)
T ss_dssp HHHHHHHHHHHHH---CCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHHHHHHHh---CccCCCCeEEEEeccCCcceEEEEeeccccceEEEeeccc
Confidence 4667777744433 12346789999999999999988875 35799999864
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=90.78 E-value=0.39 Score=40.69 Aligned_cols=61 Identities=20% Similarity=0.251 Sum_probs=47.5
Q ss_pred CCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 119 FNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 119 ~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++||++|=-|++.|+ ++..+++.|++|+++|.+++-++.+...+..++ .++.....|..+.
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g------~~~~~~~~Dv~~~ 66 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG------VEARSYVCDVTSE 66 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------SCEEEEECCTTCH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEccCCCH
Confidence 789999999988775 445556669999999999988888887776543 5677778887654
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=90.77 E-value=0.5 Score=37.92 Aligned_cols=51 Identities=16% Similarity=0.096 Sum_probs=40.2
Q ss_pred CCCCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHcc
Q 020158 116 SSDFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNS 166 (330)
Q Consensus 116 ~~~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~ 166 (330)
...++||+||=.|++.|+ ++..+++.|.+|++++.+++-++.+...+..+.
T Consensus 18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~ 71 (191)
T d1luaa1 18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF 71 (191)
T ss_dssp TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc
Confidence 468999999999987663 344555668999999999988888887776654
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=90.68 E-value=0.13 Score=41.83 Aligned_cols=43 Identities=21% Similarity=0.197 Sum_probs=36.0
Q ss_pred CCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHHH
Q 020158 119 FNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAKN 161 (330)
Q Consensus 119 ~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~N 161 (330)
++..+|+=||+|+ |+-++..|.. |+.|++.|.++..++.++..
T Consensus 27 V~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l 71 (183)
T d1l7da1 27 VPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESL 71 (183)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred cCCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence 4567999999997 8888877765 99999999999888877753
|
| >d1booa_ c.66.1.11 (A:) m.PvuII N4 cytosine-specific DNA methyltransferase {Proteus vulgaris [TaxId: 585]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Type II DNA methylase domain: m.PvuII N4 cytosine-specific DNA methyltransferase species: Proteus vulgaris [TaxId: 585]
Probab=90.61 E-value=0.12 Score=44.42 Aligned_cols=58 Identities=12% Similarity=0.130 Sum_probs=48.5
Q ss_pred HHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHc
Q 020158 104 VLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLN 165 (330)
Q Consensus 104 ~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N 165 (330)
.|.++|.... .-+|..|||-=||+|-+++++...|.+.+++|++++..+.+++.+..+
T Consensus 238 ~L~~rlI~~~----s~~gdiVlDpF~GSGTT~~AA~~lgR~~Ig~El~~~y~~~a~~Rl~~~ 295 (320)
T d1booa_ 238 KLPEFFIRML----TEPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFLDN 295 (320)
T ss_dssp HHHHHHHHHH----CCTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGSCS
T ss_pred HHHHHhhhhc----ccCCCEEEecCCCCcHHHHHHHHcCCcEEEEeCCHHHHHHHHHHHHhc
Confidence 5666666552 347889999999999999999999999999999999999998776543
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=90.60 E-value=0.29 Score=39.03 Aligned_cols=44 Identities=16% Similarity=0.221 Sum_probs=35.9
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-C-CeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-A-WTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~-~~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||=+|||. |+.++.+|+. | ..|+++|.+++=++.+++
T Consensus 25 ~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~ 71 (174)
T d1e3ia2 25 KVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 71 (174)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH
Confidence 456789999999997 9999999887 4 589999999876666654
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=90.48 E-value=0.44 Score=36.99 Aligned_cols=44 Identities=18% Similarity=0.223 Sum_probs=34.9
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||=.|||. |+..+.+|+. |.+|+++|.+++=++.+++
T Consensus 24 ~~~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~ 69 (168)
T d1rjwa2 24 GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE 69 (168)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCCCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh
Confidence 345788999999986 7777777765 7899999999887777654
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.24 E-value=0.53 Score=39.76 Aligned_cols=64 Identities=14% Similarity=0.115 Sum_probs=48.1
Q ss_pred CCCCCeEEEEcCccCHHH---HHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 118 DFNGIISLELGAGTGLAG---ILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~g---l~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.|+||+||=-|++.|+-. ..+++.|.+|+++|.+++-++.+.+.+..... ..++.....|-.+.
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~----~~~~~~~~~Dls~~ 73 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY----PGTLIPYRCDLSNE 73 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----SSEEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC----CceEEEEEccCCCH
Confidence 489999999999987533 33444589999999999888887776665432 35778888887764
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.00 E-value=0.39 Score=37.86 Aligned_cols=56 Identities=20% Similarity=0.089 Sum_probs=38.8
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcC-c-cCHHHHHHHHh-CCeEEEEeCchHHHHHHH
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGA-G-TGLAGILLSRV-AWTVFLTDHGNYILDNCA 159 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~-G-tGL~gl~lA~~-~~~V~~TD~~~~~L~~~~ 159 (330)
+..-|.+.+.+. ...-+|.+||=.|+ | +|+..+.+|+. |.+|++++.+++-++.++
T Consensus 12 ~~~TA~~al~~~--~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~ 70 (174)
T d1yb5a2 12 PYFTAYRALIHS--ACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL 70 (174)
T ss_dssp HHHHHHHHHHTT--SCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHHHH--hCCCCCCEEEEEeccccccccccccccccCccccccccccccccccc
Confidence 334444444332 23457899999997 3 57888877776 789999998887666665
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.99 E-value=0.21 Score=39.35 Aligned_cols=44 Identities=25% Similarity=0.310 Sum_probs=34.3
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CC-eEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AW-TVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~-~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||=+|||. |+..+.+|+. |. +|+++|.++.-++.+++
T Consensus 23 ~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~ 69 (171)
T d1pl8a2 23 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 69 (171)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH
Confidence 345688999999985 7777777766 55 89999999887777653
|
| >d1zkda1 c.66.1.52 (A:2-366) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: RPA4359-like domain: Hypothetical protein RPA4359 species: Rhodopseudomonas palustris [TaxId: 1076]
Probab=89.90 E-value=0.38 Score=43.02 Aligned_cols=60 Identities=13% Similarity=0.108 Sum_probs=35.4
Q ss_pred HHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHh---------CCeEEEEeCchHHHHHHHHH
Q 020158 102 ELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRV---------AWTVFLTDHGNYILDNCAKN 161 (330)
Q Consensus 102 a~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~---------~~~V~~TD~~~~~L~~~~~N 161 (330)
+.++|.|+...-..-...+..+|+|+|+|.|.+..-+.+. ..+++..+.++.+.+.-+.+
T Consensus 61 g~~ia~~~~~~~~~~~~~~~~~ivE~GaG~G~La~dil~~l~~~~~~~~~~~~~~vE~s~~L~~~Q~~~ 129 (365)
T d1zkda1 61 GELLGLWSASVWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTL 129 (365)
T ss_dssp HHHHHHHHHHHHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCccceEEecCCcccHHHHhhhhhhcccccccccceEEEeccchhHHHHHHHH
Confidence 3455666654321012234468999999999665443332 23689999997654444433
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=89.90 E-value=0.37 Score=38.37 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=36.6
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-C-CeEEEEeCchHHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-A-WTVFLTDHGNYILDNCAKN 161 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~-~~V~~TD~~~~~L~~~~~N 161 (330)
..-+|.+|+=.|||. |+.++.+++. | .+|+++|.+++-++.+++-
T Consensus 26 ~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~ 73 (176)
T d1d1ta2 26 KVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 73 (176)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc
Confidence 456789999999995 7888888776 4 7999999999988877643
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=89.72 E-value=0.41 Score=37.49 Aligned_cols=43 Identities=19% Similarity=0.111 Sum_probs=33.7
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-CCeEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-AWTVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~~~V~~TD~~~~~L~~~~ 159 (330)
..-.|.+||=+|||. |+..+.+|+. |.+++++|.+++-++.++
T Consensus 27 ~~~~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~ 71 (168)
T d1uufa2 27 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK 71 (168)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred CCCCCCEEEEeccchHHHHHHHHhhcccccchhhccchhHHHHHh
Confidence 456789999999985 7777777775 788899999887666655
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=89.62 E-value=0.4 Score=38.08 Aligned_cols=44 Identities=11% Similarity=0.129 Sum_probs=36.1
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-C-CeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-A-WTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~-~~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||=+|||. |+.++.+|+. | .+|+++|.+++-++.+++
T Consensus 24 ~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~ 70 (174)
T d1p0fa2 24 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 70 (174)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHH
Confidence 456789999999995 7888877776 4 689999999888877764
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=89.37 E-value=0.43 Score=37.89 Aligned_cols=43 Identities=16% Similarity=0.198 Sum_probs=34.8
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-C-CeEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-A-WTVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~-~~V~~TD~~~~~L~~~~ 159 (330)
..-+|.+||=+|||. |+.++.+|+. | .+|+++|.++.-++.++
T Consensus 24 ~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~ 69 (174)
T d1jqba2 24 DIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK 69 (174)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH
T ss_pred CCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHH
Confidence 445788999999996 8888888887 5 48999999987777765
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=89.30 E-value=0.32 Score=39.31 Aligned_cols=59 Identities=10% Similarity=-0.048 Sum_probs=43.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
...+|..++|..+|.|--+..+.....+|++.|.+++++..++.. . ..++.+....+.+
T Consensus 15 ~~~~g~~~vD~T~G~GGhs~~iL~~~~~viaiD~D~~ai~~a~~~---~------~~~~~~~~~~f~~ 73 (182)
T d1wg8a2 15 AVRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKGL---H------LPGLTVVQGNFRH 73 (182)
T ss_dssp TCCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHT---C------CTTEEEEESCGGG
T ss_pred CCCCCCEEEEeCCCCcHHHHHHhcccCcEEEEhhhhhHHHHHhhc---c------ccceeEeehHHHH
Confidence 345788999999999966666666677999999999999887642 1 2456665555443
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=89.24 E-value=0.68 Score=39.07 Aligned_cols=63 Identities=19% Similarity=0.201 Sum_probs=48.4
Q ss_pred CCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 119 FNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 119 ~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++||++|=-|++.|+ ++..+++.|++|+++|.+++-++.+...+..... ..++.....|..+.
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~----~~~~~~~~~Dvt~~ 67 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP----DAEVLTTVADVSDE 67 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT----TCCEEEEECCTTSH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC----CCeEEEEeccCCCH
Confidence 689999999998874 4556666799999999999888877766655442 35677788887664
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.15 E-value=0.28 Score=39.84 Aligned_cols=111 Identities=14% Similarity=0.140 Sum_probs=61.6
Q ss_pred CeEEEEcCcc-C-HHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 122 IISLELGAGT-G-LAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 122 ~~VLELG~Gt-G-L~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++|-=||+|+ | -.+..+|..|.+|++.|.+++.++.++.+++.+-.......... ....... ......
T Consensus 5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~------~~~~~~~----~~~~~l 74 (192)
T d1f0ya2 5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAE------NPKAGDE----FVEKTL 74 (192)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSS------CHHHHHH----HHHHHH
T ss_pred EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhc------cchhhHH----HHHHHH
Confidence 5788899986 3 44556666799999999999999888877765421000000000 0000000 000000
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccC
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPL 243 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~ 243 (330)
....+..+........|+|+=+ +..+.+.-..+++.|.+++.+
T Consensus 75 ~~i~~~~d~~~a~~~ad~ViEa-v~E~l~~K~~v~~~l~~~~~~ 117 (192)
T d1f0ya2 75 STIATSTDAASVVHSTDLVVEA-IVENLKVKNELFKRLDKFAAE 117 (192)
T ss_dssp HTEEEESCHHHHTTSCSEEEEC-CCSCHHHHHHHHHHHTTTSCT
T ss_pred hhccccchhHhhhcccceehhh-cccchhHHHHHHHHHhhhccc
Confidence 0111111112234678999977 666667778888888888854
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=89.04 E-value=0.47 Score=40.50 Aligned_cols=64 Identities=13% Similarity=0.211 Sum_probs=49.1
Q ss_pred CCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 119 FNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 119 ~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++||++|=-|++.|+ ++..+++.|++|+++|.+++-++.+...+..++.. ..++.....|..+.
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~---~~~~~~~~~Dv~~~ 68 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP---AEKINAVVADVTEA 68 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---GGGEEEEECCTTSH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCC---CcceEEEEeeCCCH
Confidence 689999999998875 33445555899999999998888888888775421 34678888887664
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.85 E-value=0.62 Score=39.16 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=58.9
Q ss_pred CCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCC
Q 020158 119 FNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNS 195 (330)
Q Consensus 119 ~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~ 195 (330)
++||++|=-|++.|+ ++..+++.|++|+++|.+++-++.+...+..... ..++.+...|-.+...-
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dv~~~~~v------- 69 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE----PQKTLFIQCDVADQQQL------- 69 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC----GGGEEEEECCTTSHHHH-------
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC----CCcEEEEEeecCCHHHH-------
Confidence 468999999988774 2333444589999999998877776665543221 35677788887654110
Q ss_pred CccccccccCccchhccCCeeEEEEeccccCcccHH
Q 020158 196 SASQERYSWNSSELKEVQRASVLLAADVIYSDDLTD 231 (330)
Q Consensus 196 ~~~~~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~ 231 (330)
...+ +.-.+..++.|+++.+=-+.....++
T Consensus 70 ---~~~~---~~~~~~~G~iDilVnnAg~~~~~~~~ 99 (254)
T d2gdza1 70 ---RDTF---RKVVDHFGRLDILVNNAGVNNEKNWE 99 (254)
T ss_dssp ---HHHH---HHHHHHHSCCCEEEECCCCCCSSSHH
T ss_pred ---HHHH---HHHHHHcCCcCeecccccccccccch
Confidence 0000 00112346899988766665555433
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.06 E-value=1 Score=37.60 Aligned_cols=63 Identities=22% Similarity=0.240 Sum_probs=49.8
Q ss_pred CCCCCCeEEEEcCccCHH---HHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 117 SDFNGIISLELGAGTGLA---GILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~---gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
..+.||.||=-|++.|+- +..+|+.|.+|+++|.+++-++.+..++... ..++.....|-.+.
T Consensus 3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~------~~~~~~~~~Dvs~~ 68 (244)
T d1yb1a_ 3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL------GAKVHTFVVDCSNR 68 (244)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT------TCCEEEEECCTTCH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEEeeCCCH
Confidence 568999999999998854 4445566999999999999888888888654 35677888887664
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.72 E-value=1.3 Score=38.09 Aligned_cols=69 Identities=20% Similarity=0.160 Sum_probs=49.0
Q ss_pred CCCCCCCeEEEEcCccCHH---HHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 116 SSDFNGIISLELGAGTGLA---GILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 116 ~~~~~g~~VLELG~GtGL~---gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
|..++||++|=-|++.|+- +..+++.|++|+++|.+++-++.+...+..+..... ..++.....|-.+.
T Consensus 7 ~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~-~~~~~~~~~Dvs~~ 78 (297)
T d1yxma1 7 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK-QARVIPIQCNIRNE 78 (297)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTC-CCCEEEEECCTTCH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhcccc-CceEEEEeccCCCH
Confidence 4678999999999988743 334455589999999998888777766655432211 45677778876654
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=87.66 E-value=1.1 Score=37.62 Aligned_cols=62 Identities=16% Similarity=0.202 Sum_probs=47.2
Q ss_pred CCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 118 DFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.++||+||=.|+..|+ ++..+++.|.+|+++|.+++-++.+.+.+..++ ..+.+..+|..+.
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~------~~~~~~~~D~s~~ 67 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG------LNVEGSVCDLLSR 67 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CCceEEEeecCCH
Confidence 4689999999998774 344455668999999999988888777776654 5667777887654
|
| >d2p41a1 c.66.1.25 (A:8-264) An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 {Dengue virus 2 [TaxId: 11060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap methylase domain: An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 species: Dengue virus 2 [TaxId: 11060]
Probab=87.47 E-value=0.34 Score=41.30 Aligned_cols=54 Identities=19% Similarity=0.035 Sum_probs=41.3
Q ss_pred cCeEeechHHHHHHHHhhhcCCCCCCCCCeEEEEcCccCHHHHHHHHhC--CeEEEEeCc
Q 020158 94 VGLQVWKAELVLADFVMHKMCTSSDFNGIISLELGAGTGLAGILLSRVA--WTVFLTDHG 151 (330)
Q Consensus 94 ~G~~vW~aa~~La~~l~~~~~~~~~~~g~~VLELG~GtGL~gl~lA~~~--~~V~~TD~~ 151 (330)
.|..+=+++.-|.+..... ....+.+|+|||||.|--+-.++... ..|.+.|+.
T Consensus 44 ~~~~~SR~~~Kl~~~~~~~----~~~~~~~vvDlG~~pGgws~~~a~~~~v~~V~g~~iG 99 (257)
T d2p41a1 44 DHHAVSRGSAKLRWFVERN----LVTPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKG 99 (257)
T ss_dssp SSCCSSTHHHHHHHHHHTT----SSCCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCC
T ss_pred cCCCcchHHHHHHHHHHhc----CccCCCeEEEecCCCChHHHHHHhhcCCCceeEEEec
Confidence 3557779999997655433 33456689999999999999998773 578888885
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=87.19 E-value=1 Score=37.79 Aligned_cols=63 Identities=16% Similarity=0.134 Sum_probs=45.3
Q ss_pred CCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 118 DFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.++||++|=-|++.|+ ++..+++.|++|+++|.+++-++.+...+.... ..++.....|-.+.
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-----g~~~~~~~~Dv~~~ 67 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-----GVETMAFRCDVSNY 67 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----CCCEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-----CCcEEEEEccCCCH
Confidence 4789999999998774 344455568999999999877766665554432 25567777876653
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=87.19 E-value=0.73 Score=39.10 Aligned_cols=65 Identities=14% Similarity=0.169 Sum_probs=48.9
Q ss_pred CCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 118 DFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.++||++|=-|++.|+ ++..+++.|++|+++|.+++-++.+.+.+...+.. ..++.....|..+.
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~---~~~~~~~~~Dvs~~ 69 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS---EKQVNSVVADVTTE 69 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC---GGGEEEEECCTTSH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---CCceEEEEccCCCH
Confidence 3789999999988774 33445556899999999998888888777665421 35688888887664
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=86.88 E-value=0.69 Score=36.25 Aligned_cols=44 Identities=14% Similarity=-0.082 Sum_probs=34.5
Q ss_pred CCCCCCeEEEEcCc--cCHHHHHHHHh-CCeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAG--TGLAGILLSRV-AWTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~G--tGL~gl~lA~~-~~~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||=.|+| .|+..+.+|+. |.+|++||.+++-++.+++
T Consensus 25 ~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~ 71 (179)
T d1qora2 25 EIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK 71 (179)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh
Confidence 34568899998666 46777777776 8999999999887777763
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=86.52 E-value=1.1 Score=35.15 Aligned_cols=44 Identities=20% Similarity=0.237 Sum_probs=33.5
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-C-CeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-A-WTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~-~~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||=+|||. |+..+.+|+. | ..|+++|.++.-++.+++
T Consensus 25 ~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~ 71 (174)
T d1f8fa2 25 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 71 (174)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHH
Confidence 345788999999985 6777777665 4 578899999887777764
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=86.36 E-value=1.1 Score=37.84 Aligned_cols=63 Identities=13% Similarity=0.063 Sum_probs=47.5
Q ss_pred CCCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 117 SDFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
..++||+||=-|++.|+ ++..+++.|++|+++|.+++-++.+...+..+. .++.....|-.+.
T Consensus 4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~------~~~~~~~~Dv~~~ 69 (259)
T d1xq1a_ 4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG------FQVTGSVCDASLR 69 (259)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTSH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CceEEEeccCCCH
Confidence 34689999999998875 444555568999999999888888777776543 4677777776543
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=85.91 E-value=0.92 Score=38.20 Aligned_cols=64 Identities=14% Similarity=0.205 Sum_probs=48.2
Q ss_pred CCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 119 FNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 119 ~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++||.+|=-|++.|+ ++..+++.|++|+++|.+++-++.+...+...+.. ..++.+...|..+.
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~---~~~~~~~~~Dvt~~ 69 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVS---EQNVNSVVADVTTD 69 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC---GGGEEEEECCTTSH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC---cCceEEEEccCCCH
Confidence 789999999998764 33445556899999999998888888877665421 35688888887654
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=85.51 E-value=1.8 Score=36.19 Aligned_cols=63 Identities=14% Similarity=0.196 Sum_probs=46.8
Q ss_pred CCCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 117 SDFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
..++||++|=-|++.|+ ++..+++.|++|+++|.+++-++.+...+...+ .++.+...|-.+.
T Consensus 4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g------~~~~~~~~Dv~~~ 69 (259)
T d2ae2a_ 4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG------FKVEASVCDLSSR 69 (259)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT------CEEEEEECCTTCH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CCceEEEeeCCCH
Confidence 35789999999998774 344455568999999999888887777665543 5677777776553
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=85.42 E-value=1.4 Score=37.28 Aligned_cols=63 Identities=22% Similarity=0.361 Sum_probs=43.8
Q ss_pred CCCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCC
Q 020158 117 SDFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMN 184 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~ 184 (330)
..++||++|=-|+..|+ ++..+++.|++|+++|.+.+-++.+.+.+.... ...+.+...|-.+
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-----g~~~~~~~~D~~~ 86 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-----GNKVHAIQCDVRD 86 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-----SSCEEEEECCTTC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-----CCceEEEEecccC
Confidence 36899999999987763 333344458999999999877766665554322 2556677777554
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=85.05 E-value=1.2 Score=34.71 Aligned_cols=43 Identities=23% Similarity=0.251 Sum_probs=33.3
Q ss_pred CCCCCeEEEEcCcc-CHHHHHHHHh-C-CeEEEEeCchHHHHHHHH
Q 020158 118 DFNGIISLELGAGT-GLAGILLSRV-A-WTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 118 ~~~g~~VLELG~Gt-GL~gl~lA~~-~-~~V~~TD~~~~~L~~~~~ 160 (330)
..+|.+||=.|||. |+..+.+++. | ..|+++|.+++-++.+++
T Consensus 30 ~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~ 75 (172)
T d1h2ba2 30 LYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 75 (172)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred cCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhh
Confidence 35688999999985 7777777665 4 689999999877776663
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=84.67 E-value=3.1 Score=32.27 Aligned_cols=46 Identities=26% Similarity=0.238 Sum_probs=32.1
Q ss_pred CCCCCCeEEEEcCccCHHHHHH--HHhCCeEEEEeCchHHHHHHHHHH
Q 020158 117 SDFNGIISLELGAGTGLAGILL--SRVAWTVFLTDHGNYILDNCAKNV 162 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~l--A~~~~~V~~TD~~~~~L~~~~~Nv 162 (330)
..++|++||=||||----+++. +..+.+|+....+.+-.+.+.+.+
T Consensus 14 ~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~ 61 (170)
T d1nyta1 14 FIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLF 61 (170)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHT
T ss_pred CCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHH
Confidence 4678999999999954434333 344778999999876555555444
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=84.61 E-value=1.1 Score=37.62 Aligned_cols=61 Identities=16% Similarity=0.288 Sum_probs=45.6
Q ss_pred CCCCeEEEEcCccCHH---HHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 119 FNGIISLELGAGTGLA---GILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 119 ~~g~~VLELG~GtGL~---gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++||++|=-|++.|+- +..+++.|++|+++|.+++-++.+.+.+...+ .++.....|-.+.
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g------~~~~~~~~Dvs~~ 72 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG------GQAFACRCDITSE 72 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT------CCEEEEECCTTCH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC------CcEEEEEccCCCH
Confidence 6899999999887743 33445558999999999888888877776543 5667777776653
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=84.48 E-value=1.2 Score=34.64 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=33.1
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh-C-CeEEEEeCchHHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV-A-WTVFLTDHGNYILDNCAK 160 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~-~-~~V~~TD~~~~~L~~~~~ 160 (330)
..-+|.+||=.|||. |+.++.+|+. | ..|+++|.+++-++.+++
T Consensus 25 ~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~ 71 (176)
T d2fzwa2 25 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 71 (176)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHH
Confidence 456789999999983 5666666655 4 689999999887777663
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=84.39 E-value=1.5 Score=36.53 Aligned_cols=61 Identities=13% Similarity=0.049 Sum_probs=45.2
Q ss_pred CCCCCeEEEEcCccCHHHHHHH----HhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 118 DFNGIISLELGAGTGLAGILLS----RVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA----~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.+++|.+|=-|++.| .|..+| +.|++|+++|.+++-++.+...+...+ .++.....|-.+.
T Consensus 7 ~lenKvalITGas~G-IG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g------~~~~~~~~Dvt~~ 71 (251)
T d2c07a1 7 CGENKVALVTGAGRG-IGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG------YESSGYAGDVSKK 71 (251)
T ss_dssp CCSSCEEEEESTTSH-HHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT------CCEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC------CcEEEEEccCCCH
Confidence 467999999998877 343333 348999999999988888877776543 5677777776654
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=84.18 E-value=1.2 Score=37.56 Aligned_cols=63 Identities=17% Similarity=0.236 Sum_probs=47.0
Q ss_pred CCCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCc-hHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 117 SDFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHG-NYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~-~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
..++||+||=-|++.|+ ++..+++.|++|+++|.+ ++.++.+...+..++ .++.+...|..+.
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g------~~~~~~~~D~~~~ 80 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG------SDAACVKANVGVV 80 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT------CCEEEEECCTTCH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhC------CceeeEeCCCCCH
Confidence 45899999999998875 444555669999999987 567777776666654 5677777877653
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=84.15 E-value=1 Score=37.80 Aligned_cols=62 Identities=11% Similarity=0.191 Sum_probs=45.2
Q ss_pred CCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCc-hHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 119 FNGIISLELGAGTGL---AGILLSRVAWTVFLTDHG-NYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 119 ~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~-~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++||++|=-|++.|+ ++..+|+.|++|+++|.+ .+.++.+...+.... ..++.+...|-.+.
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~~~ 67 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-----GVKVLYDGADLSKG 67 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-----TSCEEEECCCTTSH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-----CCcEEEEECCCCCH
Confidence 689999988998875 444555668999999997 567777777665443 35677777886654
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=84.07 E-value=1.2 Score=37.57 Aligned_cols=61 Identities=11% Similarity=0.172 Sum_probs=43.8
Q ss_pred CCCCCeEEEEcCccCHH---HHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 118 DFNGIISLELGAGTGLA---GILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~---gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
-++||++|=-|++.|+- +..+++.|++|+++|.+++-++.+...+.. .+.+.+...|..+.
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~-------~~~~~~~~~Dv~~~ 66 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-------PDVISFVHCDVTKD 66 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-------TTTEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC-------CCceEEEEccCCCH
Confidence 37899999999988742 233445589999999998877777666532 34566777776654
|
| >d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: FkbM-like domain: Methyltransferase FkbM species: Methylobacillus flagellatus [TaxId: 405]
Probab=83.96 E-value=1.4 Score=39.66 Aligned_cols=48 Identities=15% Similarity=0.090 Sum_probs=41.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHh----CCeEEEEeCchHHHHHHHHHHHHccC
Q 020158 120 NGIISLELGAGTGLAGILLSRV----AWTVFLTDHGNYILDNCAKNVQLNSG 167 (330)
Q Consensus 120 ~g~~VLELG~GtGL~gl~lA~~----~~~V~~TD~~~~~L~~~~~Nv~~N~~ 167 (330)
++..++|+||=.|..++.++.. ..+|++.+.++...+.+++|+..|..
T Consensus 212 kn~vfIDVGAniG~~s~~f~~~~~~~~~kV~aFEP~p~n~~~LkkNi~~n~~ 263 (395)
T d2py6a1 212 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTD 263 (395)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTT
T ss_pred CCCEEEECCcCCCHHHHHHHHhcCCCCCEEEEEeCCHHHHHHHHHHHHhccc
Confidence 4678999999999888776654 35899999999999999999999864
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=83.83 E-value=0.84 Score=38.38 Aligned_cols=63 Identities=10% Similarity=-0.005 Sum_probs=43.9
Q ss_pred CCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 118 DFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
.|+||+||=-|++.|+ ++..+++.|++|+++|.+.+-++.+.+.+.... ..++.....|-.+.
T Consensus 6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~~~ 71 (260)
T d1h5qa_ 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-----GVKTKAYQCDVSNT 71 (260)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-----TCCEEEEECCTTCH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-----CCceEEEEccCCCH
Confidence 4899999999988764 344455568999999999766655555443322 25677777886654
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=82.58 E-value=1.7 Score=36.17 Aligned_cols=60 Identities=15% Similarity=0.146 Sum_probs=42.8
Q ss_pred CCCCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 117 SDFNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
..++||++|=-|++.|+ ++..+++.|++|+++|.+++-++.+...+ ..++.+...|-.+.
T Consensus 2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~~Dv~~~ 64 (244)
T d1nffa_ 2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---------ADAARYVHLDVTQP 64 (244)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---------GGGEEEEECCTTCH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---------hCcceEEEeecCCH
Confidence 35789999999998874 33445555899999999987776665544 24456667776553
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=82.32 E-value=1.1 Score=37.46 Aligned_cols=60 Identities=13% Similarity=0.222 Sum_probs=45.0
Q ss_pred CCCCeEEEEcCccCH---HHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCC
Q 020158 119 FNGIISLELGAGTGL---AGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNP 185 (330)
Q Consensus 119 ~~g~~VLELG~GtGL---~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~ 185 (330)
++||++|=-|++.|+ ++..+++.|++|+++|.+++.++.+.+.+. . ..++.+...|-.+.
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~--~-----~~~~~~~~~Dv~~~ 66 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG--T-----PDQIQFFQHDSSDE 66 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--C-----TTTEEEEECCTTCH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--C-----CCcEEEEEccCCCH
Confidence 789999999988774 344455568999999999988887776653 2 35677778876654
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=82.24 E-value=0.79 Score=36.01 Aligned_cols=56 Identities=18% Similarity=0.158 Sum_probs=39.4
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCeEEEEcC-c-cCHHHHHHHHh-CCeEEEEeCchHHHHHHH
Q 020158 101 AELVLADFVMHKMCTSSDFNGIISLELGA-G-TGLAGILLSRV-AWTVFLTDHGNYILDNCA 159 (330)
Q Consensus 101 aa~~La~~l~~~~~~~~~~~g~~VLELG~-G-tGL~gl~lA~~-~~~V~~TD~~~~~L~~~~ 159 (330)
.+..-|.+.++.. ..-+|.+||=.|+ | .|+..+.+|+. |.+|++++.+++-++.++
T Consensus 11 ~~~~TA~~al~~~---~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~ 69 (171)
T d1iz0a2 11 VSFLTAYLALKRA---QARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL 69 (171)
T ss_dssp HHHHHHHHHHHHT---TCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH
T ss_pred HHHHHHHHHHHHh---CCCCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc
Confidence 3444455555552 4568899999985 4 47777777776 889999999876666555
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=82.21 E-value=1.7 Score=33.70 Aligned_cols=43 Identities=19% Similarity=0.215 Sum_probs=32.4
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHh--CCeEEEEeCchHHHHHHH
Q 020158 117 SDFNGIISLELGAGT-GLAGILLSRV--AWTVFLTDHGNYILDNCA 159 (330)
Q Consensus 117 ~~~~g~~VLELG~Gt-GL~gl~lA~~--~~~V~~TD~~~~~L~~~~ 159 (330)
..-+|.+||=+|||. |+..+.+++. +..|+++|.+++-++.++
T Consensus 25 ~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~ 70 (175)
T d1cdoa2 25 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK 70 (175)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHH
Confidence 456789999999997 5555555554 568999999987776655
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=82.15 E-value=0.72 Score=37.00 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=57.6
Q ss_pred CeEEEEcCcc-C-HHHHHHHHhCCeEEEEeCchHHHHHHHHHHHHccCCCCCCCeeEEEEecCCCCCCCCccCCCCCccc
Q 020158 122 IISLELGAGT-G-LAGILLSRVAWTVFLTDHGNYILDNCAKNVQLNSGVFSHQGSVHVRDLNWMNPWPPIFSLGNSSASQ 199 (330)
Q Consensus 122 ~~VLELG~Gt-G-L~gl~lA~~~~~V~~TD~~~~~L~~~~~Nv~~N~~~~~~~~~v~v~~ldW~~~~~~~~~~~~~~~~~ 199 (330)
++|-=+|+|+ | -.+..+|..|.+|++.|.+++.++.+...+..+-..........-... ....
T Consensus 5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~---------------~~~~ 69 (186)
T d1wdka3 5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKM---------------AEVL 69 (186)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHH---------------HHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhh---------------hhhh
Confidence 4577789986 3 223455566899999999998888776665543210000000000000 0000
Q ss_pred cccccCccchhccCCeeEEEEeccccCcccHHHHHHHHHHhccC
Q 020158 200 ERYSWNSSELKEVQRASVLLAADVIYSDDLTDALFHTLKRLMPL 243 (330)
Q Consensus 200 ~~~~w~~~~~~~~~~~DlIlaaDviY~~~~~~~l~~tl~~lL~~ 243 (330)
.....+ .+.+.....|+|+=+ +..+.+.-..+++.|.+++.+
T Consensus 70 ~~i~~~-~~~~~~~~adlViEa-v~E~l~~K~~lf~~l~~~~~~ 111 (186)
T d1wdka3 70 NGIRPT-LSYGDFGNVDLVVEA-VVENPKVKQAVLAEVENHVRE 111 (186)
T ss_dssp HHEEEE-SSSTTGGGCSEEEEC-CCSCHHHHHHHHHHHHTTSCT
T ss_pred ceeecc-cccccccccceeeee-ecchHHHHHHHHHHHHhhcCC
Confidence 000000 001123568999864 667777888899999998854
|
| >d2c7pa1 c.66.1.26 (A:1-327) DNA methylase HhaI {Haemophilus haemolyticus [TaxId: 726]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: C5 cytosine-specific DNA methylase, DCM domain: DNA methylase HhaI species: Haemophilus haemolyticus [TaxId: 726]
Probab=80.56 E-value=1.8 Score=36.94 Aligned_cols=46 Identities=20% Similarity=0.281 Sum_probs=38.9
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCe-EEEEeCchHHHHHHHHHH
Q 020158 117 SDFNGIISLELGAGTGLAGILLSRVAWT-VFLTDHGNYILDNCAKNV 162 (330)
Q Consensus 117 ~~~~g~~VLELG~GtGL~gl~lA~~~~~-V~~TD~~~~~L~~~~~Nv 162 (330)
....+.+||||=||.|-.++.+-+.|.+ |.+.|+++.+++..+.|.
T Consensus 7 ~~~~~lrv~~lFsG~Gg~~~gl~~aG~~~v~a~e~d~~a~~~~~~N~ 53 (327)
T d2c7pa1 7 KQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNF 53 (327)
T ss_dssp CTTTTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHH
T ss_pred ccCCCCeEEEECccccHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHC
Confidence 3457899999999999888888888865 566899999999998887
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=80.51 E-value=0.87 Score=32.00 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=24.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHH----hCCeEEEEeCch
Q 020158 118 DFNGIISLELGAGTGLAGILLSR----VAWTVFLTDHGN 152 (330)
Q Consensus 118 ~~~g~~VLELG~GtGL~gl~lA~----~~~~V~~TD~~~ 152 (330)
.++||+|+=+|.| ..|+.+|+ .|.+|++.|..+
T Consensus 2 ~~~~K~v~ViGlG--~sG~s~a~~L~~~g~~v~~~D~~~ 38 (93)
T d2jfga1 2 DYQGKNVVIIGLG--LTGLSCVDFFLARGVTPRVMDTRM 38 (93)
T ss_dssp CCTTCCEEEECCS--HHHHHHHHHHHHTTCCCEEEESSS
T ss_pred CcCCCEEEEEeEC--HHHHHHHHHHHHCCCEEEEeeCCc
Confidence 5889999999876 34444443 489999999863
|