Citrus Sinensis ID: 020180

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTTNFVM
cccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEcccccccccccccccccccccccccccccccEEEccccccccEEEcccccEEEcccccccEEEEHHHHHHHHHccEEcccccccccccccccEEEEEEEccccccEEEcccccccccccccccccccHHHHHHHHHHccccc
cccccccccEEEccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccEEccHHHccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccEEEEEccccccccccccccccEcccccccccccEEEEEccccccEEEEEEcccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccHHHccccccccccccccHHHHHHHHHHccccc
matdfksipiidvsplvakcedpkmaedpgvSQVVKQLDKACKEAGFfyvkghgipeslindVKNITQkffdlpyeekikikltpatgyrgyqrigenitkgipdMHEAIDCYKEIQEGMYGalgktmegcnqwplnppnFRALMEEYVNLCTDLSRKIMRGIALalggspfefegvragdAFWVLRIIgypglsgakdqkkpennigcgahtdyglltlvnqdddiTALEVRNmsgewisappipgtfvcnIGDMLKIYSnglyestlhrvvnsspkyRVCVAYFYEtnfdaavepldickqrtgetkqfgravygEHLVSKVTTNFVM
matdfksipiidvsplVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKikltpatgyrgyQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQfgravygehlvskvttnfvm
MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTTNFVM
*******IPIIDVSPLVAKC************QVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSG********NNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTT****
***DFKSIPIIDVSPLVAKCED*K***DPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGA****K****IGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQ**G**KQFGRAVYGEHLVSKVTTNFVM
MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTTNFVM
*****KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTTNF**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTTNFVM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query330 2.2.26 [Sep-21-2011]
Q54RA4363 Probable iron/ascorbate o yes no 0.957 0.870 0.321 9e-42
A6BM06368 1-aminocyclopropane-1-car N/A no 0.954 0.855 0.322 2e-40
Q76NT9368 1-aminocyclopropane-1-car no no 0.954 0.855 0.322 2e-40
D4N501364 Probable 2-oxoglutarate/F N/A no 0.866 0.785 0.298 1e-28
Q39224358 Protein SRG1 OS=Arabidops no no 0.872 0.804 0.289 5e-27
Q0WPW4307 1-aminocyclopropane-1-car no no 0.866 0.931 0.287 3e-26
D4N500364 Thebaine 6-O-demethylase N/A no 0.818 0.741 0.281 7e-26
D4N502360 Codeine O-demethylase OS= N/A no 0.878 0.805 0.275 3e-25
Q9ZWQ9335 Flavonol synthase/flavano N/A no 0.775 0.764 0.300 5e-25
Q39103358 Gibberellin 3-beta-dioxyg no no 0.821 0.756 0.278 8e-25
>sp|Q54RA4|Y3291_DICDI Probable iron/ascorbate oxidoreductase DDB_G0283291 OS=Dictyostelium discoideum GN=DDB_G0283291 PE=3 SV=1 Back     alignment and function desciption
 Score =  171 bits (432), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 181/352 (51%), Gaps = 36/352 (10%)

Query: 6   KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKN 65
           + +PIID+       E     E+     + K+++ ACK  GFFY+KGHGI + LI+ ++ 
Sbjct: 11  EQLPIIDIESYGNDKE-----EELKKKLISKEIENACKNFGFFYIKGHGIDQELIDRLER 65

Query: 66  ITQKFFDLPYEEKIKIKLTPAT-GYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGAL 124
           +++KFF L    K+K ++  A   +RGY  +G  +T G+ D  E +    E+ +     +
Sbjct: 66  LSKKFFSLDQSIKMKYRMELAQKAWRGYFVVGGELTSGLKDWKEGLYLGTELNDDHPLVI 125

Query: 125 GKT-MEGCNQWP-------LNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEG 176
            +T + G N +P        +   F+  +  Y++  T L   +M  IA++L  S   F  
Sbjct: 126 AQTPLHGLNLFPTLEEEIEYDIVGFKDTILTYIDKVTKLGHSLMELIAISLNLSADYFSS 185

Query: 177 VRAGDAFWVLRIIGYPGLSGAKDQKK-----PENN----IGCGAHTDYGLLTLVNQDDDI 227
               D   + RI  YP +  + D  K      ++N     G G HTDYG+LT++ QDD +
Sbjct: 186 RYTKDPLILYRIFNYPSIISSGDDNKTTGESSDDNDKVEWGVGEHTDYGVLTILYQDD-V 244

Query: 228 TALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRV-VNSSPKYRVCVAYF 286
             L+V + +G WISAPPI GTFVCNIGDML   + GLY ST HRV +N S + R+    F
Sbjct: 245 GGLQVHSKNG-WISAPPIKGTFVCNIGDMLDRMTGGLYRSTPHRVELNRSGRDRISFPLF 303

Query: 287 YETNFDA------AVEPLDICKQRTGETKQFG----RAVYGEHLVSKVTTNF 328
           ++ NF++       +E ++     +     F     +  YG++L++K+   F
Sbjct: 304 FDPNFNSYPTEIEGIEQIENKDDSSSRWDHFNIHSFKGSYGQYLLNKIGKVF 355

Dictyostelium discoideum (taxid: 44689)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|A6BM06|ACCO1_DICMU 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium mucoroides GN=aco PE=3 SV=1 Back     alignment and function description
>sp|Q76NT9|ACCO1_DICDI 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium discoideum GN=aco PE=2 SV=1 Back     alignment and function description
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|Q0WPW4|ACCO5_ARATH 1-aminocyclopropane-1-carboxylate oxidase 5 OS=Arabidopsis thaliana GN=At1g77330 PE=2 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|Q39103|G3OX1_ARATH Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query330
255585117327 Flavonol synthase/flavanone 3-hydroxylas 0.990 1.0 0.799 1e-157
224096718343 2-oxoglutarate-dependent dioxygenase [Po 0.996 0.959 0.763 1e-156
449484025329 PREDICTED: probable iron/ascorbate oxido 0.996 1.0 0.775 1e-155
449468303329 PREDICTED: probable iron/ascorbate oxido 0.996 1.0 0.768 1e-154
225438799330 PREDICTED: probable iron/ascorbate oxido 1.0 1.0 0.766 1e-154
363808340331 uncharacterized protein LOC100789278 [Gl 0.996 0.993 0.744 1e-151
6984228329 putative flavonol synthase-like protein 0.993 0.996 0.759 1e-150
297819704332 hypothetical protein ARALYDRAFT_485377 [ 0.993 0.987 0.736 1e-147
21554579332 flavonol synthase-like protein [Arabidop 0.993 0.987 0.739 1e-146
18409039332 2-oxoglutarate-Fe(II)-dependent oxygenas 0.993 0.987 0.736 1e-146
>gi|255585117|ref|XP_002533264.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223526920|gb|EEF29126.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 263/329 (79%), Positives = 299/329 (90%), Gaps = 2/329 (0%)

Query: 1   MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLI 60
           MATDFKSIPIIDVSPLVAKC+DP +A++P V +VVKQLD+AC+EAGFFYVKGHGIP+SLI
Sbjct: 1   MATDFKSIPIIDVSPLVAKCDDPNVAQEPAVCEVVKQLDQACREAGFFYVKGHGIPDSLI 60

Query: 61  NDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGM 120
            +VK ++ KFFDLPY+EK+KIK+TPA+GYRGYQRIGENIT+GIPDMHEAIDCYKEI+ GM
Sbjct: 61  EEVKKVSHKFFDLPYKEKLKIKMTPASGYRGYQRIGENITEGIPDMHEAIDCYKEIKPGM 120

Query: 121 YGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAG 180
           YGAL K MEGCNQWPL+PPNF+ALMEEYV LC DLSRKI+RGIALALG S  E EG  AG
Sbjct: 121 YGALSKPMEGCNQWPLDPPNFKALMEEYVALCKDLSRKILRGIALALGESADELEGEIAG 180

Query: 181 DAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWI 240
           DAFWV+RIIGYPG+S  K Q   EN+IGCGAHTDYGLLTLVNQDDDITAL+VRN+SGEWI
Sbjct: 181 DAFWVMRIIGYPGVS--KKQDLAENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWI 238

Query: 241 SAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDI 300
           SAPPIPGTFVCNIGDMLKI+SNGLY+STLHRV+N+SP+YRVCVAYF+ETNFDAA+E  DI
Sbjct: 239 SAPPIPGTFVCNIGDMLKIWSNGLYDSTLHRVINNSPRYRVCVAYFHETNFDAAIEASDI 298

Query: 301 CKQRTGETKQFGRAVYGEHLVSKVTTNFV 329
           C +RTG  K+ G+AVYGEHLVSKV TNF+
Sbjct: 299 CVKRTGGVKKTGKAVYGEHLVSKVQTNFI 327

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224096718|ref|XP_002310710.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222853613|gb|EEE91160.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449484025|ref|XP_004156762.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449468303|ref|XP_004151861.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225438799|ref|XP_002283192.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291 [Vitis vinifera] gi|296082373|emb|CBI21378.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|363808340|ref|NP_001241995.1| uncharacterized protein LOC100789278 [Glycine max] gi|255636451|gb|ACU18564.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|6984228|gb|AAF34802.1|AF228663_1 putative flavonol synthase-like protein [Euphorbia esula] Back     alignment and taxonomy information
>gi|297819704|ref|XP_002877735.1| hypothetical protein ARALYDRAFT_485377 [Arabidopsis lyrata subsp. lyrata] gi|297323573|gb|EFH53994.1| hypothetical protein ARALYDRAFT_485377 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21554579|gb|AAM63621.1| flavonol synthase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18409039|ref|NP_566930.1| 2-oxoglutarate-Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] gi|79314687|ref|NP_001030834.1| 2-oxoglutarate-Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] gi|30102622|gb|AAP21229.1| At3g50210 [Arabidopsis thaliana] gi|110735865|dbj|BAE99908.1| flavonol synthase - like protein [Arabidopsis thaliana] gi|222424080|dbj|BAH20000.1| AT3G50210 [Arabidopsis thaliana] gi|332645119|gb|AEE78640.1| 2-oxoglutarate-Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] gi|332645120|gb|AEE78641.1| 2-oxoglutarate-Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query330
TAIR|locus:2074800332 AT3G50210 [Arabidopsis thalian 0.993 0.987 0.736 4.6e-137
TAIR|locus:2114683357 DIN11 "DARK INDUCIBLE 11" [Ara 0.972 0.899 0.650 2.3e-119
DICTYBASE|DDB_G0277497368 aco "oxidoreductase" [Dictyost 0.587 0.527 0.300 2.8e-40
DICTYBASE|DDB_G0283291363 DDB_G0283291 [Dictyostelium di 0.945 0.859 0.318 5.3e-40
ASPGD|ASPL0000035942349 AN11188 [Emericella nidulans ( 0.878 0.830 0.309 8.3e-35
UNIPROTKB|G4NB73346 MGG_00611 "2OG-Fe(II) oxygenas 0.921 0.878 0.310 2.2e-34
ASPGD|ASPL0000060477332 AN0526 [Emericella nidulans (t 0.863 0.858 0.327 1.4e-32
TAIR|locus:2085879349 AT3G19010 [Arabidopsis thalian 0.915 0.865 0.317 1.4e-32
TAIR|locus:2203325329 AT1G35190 [Arabidopsis thalian 0.809 0.811 0.336 6e-32
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.766 0.681 0.316 7.9e-30
TAIR|locus:2074800 AT3G50210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1342 (477.5 bits), Expect = 4.6e-137, P = 4.6e-137
 Identities = 246/334 (73%), Positives = 286/334 (85%)

Query:     1 MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLI 60
             MATDFKS+P+ID+S L+ KC+DP MAED GV++VV+QLDKAC++AGFFYV GHGI E +I
Sbjct:     1 MATDFKSLPVIDISRLLLKCDDPDMAEDVGVAEVVQQLDKACRDAGFFYVIGHGISEDVI 60

Query:    61 NDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGM 120
             N V+ IT++FF LPYEEK+KIK+TPA GYRGYQRIGEN+TKGIPD+HEAIDCY+EI++G 
Sbjct:    61 NKVREITREFFKLPYEEKLKIKMTPAAGYRGYQRIGENVTKGIPDIHEAIDCYREIKQGK 120

Query:   121 YGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAG 180
             YG +GK MEG NQWP NP  F+ LMEEY+ LCTDLSRKI+RGI+LAL GSP+EFEG  AG
Sbjct:   121 YGDIGKVMEGPNQWPENPQEFKELMEEYIKLCTDLSRKILRGISLALAGSPYEFEGKMAG 180

Query:   181 DAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWI 240
             D FWV+R+IGYPG      Q  PEN+IGCGAHTDYGLLTLVNQDDD TAL+VRN+ GEWI
Sbjct:   181 DPFWVMRLIGYPGAEFTNGQ--PENDIGCGAHTDYGLLTLVNQDDDKTALQVRNLGGEWI 238

Query:   241 SAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDI 300
             SA PIPG+FVCNIGDMLKI SNG+YESTLHRV+N+SP+YRVCVA+FYETNFDA VEPLDI
Sbjct:   239 SAIPIPGSFVCNIGDMLKILSNGVYESTLHRVINNSPQYRVCVAFFYETNFDAVVEPLDI 298

Query:   301 CKQR----TGETKQFGRAVYGEHLVSKVTTNFVM 330
             CKQ+     G  + F RAVYGEHLVSKV TNF M
Sbjct:   299 CKQKYPGGRGGCQVFKRAVYGEHLVSKVQTNFAM 332
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA;ISS
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009267 "cellular response to starvation" evidence=TAS
GO:0007568 "aging" evidence=TAS
TAIR|locus:2114683 DIN11 "DARK INDUCIBLE 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277497 aco "oxidoreductase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0283291 DDB_G0283291 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000035942 AN11188 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4NB73 MGG_00611 "2OG-Fe(II) oxygenase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000060477 AN0526 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2085879 AT3G19010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203325 AT1G35190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q54RA4Y3291_DICDI1, ., 1, 4, ., -, ., -0.32100.95750.8705yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
PLN02485329 PLN02485, PLN02485, oxidoreductase 0.0
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 7e-81
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-62
PLN02947374 PLN02947, PLN02947, oxidoreductase 4e-42
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 4e-42
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 9e-42
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 1e-41
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 3e-41
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 8e-37
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-35
PLN02216357 PLN02216, PLN02216, protein SRG1 3e-32
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 4e-32
PLN02904357 PLN02904, PLN02904, oxidoreductase 7e-32
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 5e-31
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 6e-31
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 3e-29
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 7e-28
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 5e-27
PLN02704335 PLN02704, PLN02704, flavonol synthase 8e-27
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 4e-25
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-24
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 8e-24
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 2e-23
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 4e-22
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 6e-21
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 4e-20
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-16
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 3e-05
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 0.003
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information 
 Score =  665 bits (1718), Expect = 0.0
 Identities = 255/331 (77%), Positives = 291/331 (87%), Gaps = 3/331 (0%)

Query: 1   MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLI 60
           MATDFKSIP+ID+SPLVAKC+DP MAEDP V++VV+QLDKAC++AGFFYVKGHGI +SLI
Sbjct: 1   MATDFKSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLI 60

Query: 61  NDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGM 120
             V+ +T +FF+LPYEEK+KIK+TPA GYRGYQRIGEN+TKG PDMHEAIDCY+E + G 
Sbjct: 61  KKVREVTHEFFELPYEEKLKIKMTPAAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGK 120

Query: 121 YGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAG 180
           YG LGK MEG NQWP NP  F+ALMEEY+ LCTDLSRKI+RGIALALGGSP EFEG  AG
Sbjct: 121 YGDLGKVMEGPNQWPENPQEFKALMEEYIKLCTDLSRKILRGIALALGGSPDEFEGKMAG 180

Query: 181 DAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWI 240
           D FWV+RIIGYPG+S       PEN+IGCGAHTDYGLLTLVNQDDDITAL+VRN+SGEWI
Sbjct: 181 DPFWVMRIIGYPGVSNLNGP--PENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWI 238

Query: 241 SAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDI 300
            A PIPGTFVCNIGDMLKI+SNG+Y+STLHRV+N+SPKYRVCVA+FYETNFDAAVEPLDI
Sbjct: 239 WAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDI 298

Query: 301 CKQ-RTGETKQFGRAVYGEHLVSKVTTNFVM 330
           CK+ RTG ++ F R VYGEHLV+KV TNF  
Sbjct: 299 CKEKRTGGSQVFKRVVYGEHLVNKVLTNFAN 329

Length = 329
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 330
PLN02485329 oxidoreductase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02904357 oxidoreductase 100.0
PLN02704335 flavonol synthase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.92
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.89
PLN03176120 flavanone-3-hydroxylase; Provisional 99.77
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.48
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.98
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 94.53
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 91.64
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 83.82
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 82.95
PF07350416 DUF1479: Protein of unknown function (DUF1479); In 82.06
>PLN02485 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=7.7e-79  Score=560.79  Aligned_cols=328  Identities=77%  Similarity=1.337  Sum_probs=281.5

Q ss_pred             CCCCCCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhh
Q 020180            1 MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIK   80 (330)
Q Consensus         1 m~~~~~~iPvIDls~l~~~~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~   80 (330)
                      |++.+.+||||||+.|..+++++...+++++.+++++|.+||+++|||||+||||+.++++++++++++||+||.|+|++
T Consensus         1 ~~~~~~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~~GFf~l~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~   80 (329)
T PLN02485          1 MATDFKSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRDAGFFYVKGHGISDSLIKKVREVTHEFFELPYEEKLK   80 (329)
T ss_pred             CCCCCCCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHh
Confidence            89999999999999986532222112234577899999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCcccccccccccCCCCCchhhhhhccccccccccccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 020180           81 IKLTPATGYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIM  160 (330)
Q Consensus        81 ~~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~f~~~~~~~~~~~~~la~~ll  160 (330)
                      +.......++||.+.+.+...+..|++|.|.++....+.........+.++|.||+.+++||+.+++|++.|.+++.+||
T Consensus        81 ~~~~~~~~~rGY~~~g~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll  160 (329)
T PLN02485         81 IKMTPAAGYRGYQRIGENVTKGKPDMHEAIDCYREFKPGKYGDLGKVMEGPNQWPENPQEFKALMEEYIKLCTDLSRKIL  160 (329)
T ss_pred             hcccCCCCCCCcccccccccCCCCCcchhhhhcccCCCCcccccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence            87655556799999887777788999999998764333221112234567899999889999999999999999999999


Q ss_pred             HHHHHHhCCCCcccccccccCcccceeecccCCCCCCCCCCCCCCCcccccccCcCceEEEEeCCCCCceEEEcCCCCeE
Q 020180          161 RGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWI  240 (330)
Q Consensus       161 ~~l~~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~H~D~~~lTll~~~~~~~GLqv~~~~g~W~  240 (330)
                      ++|+++||+++++|.+.+..++.+.||++|||+++...  ..+...+|+++|||+|+||||+|++.++||||++++|+|+
T Consensus       161 ~~~a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~--~~~~~~~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi  238 (329)
T PLN02485        161 RGIALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLN--GPPENDIGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWI  238 (329)
T ss_pred             HHHHHHcCCChHHhhhhhccCccceEEEEeCCCCcccc--CCcccCcccccccCCCeEEEEeccCCCCeeeEEcCCCcEE
Confidence            99999999999988775545566789999999987521  1134578999999999999999975479999998899999


Q ss_pred             EcCCCCCeEEEEhhhHHHHHhCCeecCccceeccCCCCceEEEEEeeeCCCCceeecCcccccc-CCCCCCCCcccHHHH
Q 020180          241 SAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQR-TGETKQFGRAVYGEH  319 (330)
Q Consensus       241 ~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~~~~~~~R~S~~~F~~P~~d~~i~p~~~~~~~-~~~~~~~~~~~~g~~  319 (330)
                      +|+|.+|++|||+||+|++||||+|+||+|||+.++..+||||+||++|+.|++|+|+++++.. .+++++|+++++|||
T Consensus       239 ~V~p~pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~y~~~t~~e~  318 (329)
T PLN02485        239 WAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNFDAAVEPLDICKEKRTGGSQVFKRVVYGEH  318 (329)
T ss_pred             ECCCCCCcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCCCceeecchhhcccccCCCCCCCcEeHHHH
Confidence            9999999999999999999999999999999998877889999999999999999999998862 356789999999999


Q ss_pred             HHHHHHhhcCC
Q 020180          320 LVSKVTTNFVM  330 (330)
Q Consensus       320 ~~~~~~~~~~~  330 (330)
                      +.+|+.++|.+
T Consensus       319 ~~~~~~~~~~~  329 (329)
T PLN02485        319 LVNKVLTNFAN  329 (329)
T ss_pred             HHHHHHHhhcC
Confidence            99999999975

>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-22
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 4e-22
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 2e-21
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 1e-16
1w9y_A319 The Structure Of Acc Oxidase Length = 319 5e-16
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 2e-13
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 3e-13
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 6e-09
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 135/295 (45%), Gaps = 27/295 (9%)
Query: 4   DFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDV 63
           D   +P ID+  +  + +D K+ E+      +++L KA  + G  ++  HGIP  L+  V
Sbjct: 42  DGPQVPTIDLKNI--ESDDEKIREN-----CIEELKKASLDWGVMHLINHGIPADLMERV 94
Query: 64  KNITQKFFDLPYEEKIKIKLTPATG-YRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYG 122
           K   ++FF L  EEK K     ATG  +GY   G  +        E  D +       + 
Sbjct: 95  KKAGEEFFSLSVEEKEKYANDQATGKIQGY---GSKLANNASGQLEWEDYF------FHL 145
Query: 123 ALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAG-- 180
           A  +     + WP  P ++     EY      L+ K+ + +++ LG  P   E    G  
Sbjct: 146 AYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLE 205
Query: 181 DAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWI 240
           +    ++I  YP         +PE  +G  AHTD   LT +  +  +  L++    G+W+
Sbjct: 206 ELLLQMKINYYPKCP------QPELALGVEAHTDVSALTFILHNM-VPGLQLF-YEGKWV 257
Query: 241 SAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAV 295
           +A  +P + V +IGD L+I SNG Y+S LHR + +  K R+  A F E   D  V
Sbjct: 258 TAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIV 312
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query330
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-118
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-110
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-104
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 8e-92
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-67
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 3e-63
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
 Score =  343 bits (881), Expect = e-118
 Identities = 79/330 (23%), Positives = 127/330 (38%), Gaps = 31/330 (9%)

Query: 1   MATDFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLI 60
           M+T   +I  +  S                 ++  ++L  + +  GF  +  + + ++ I
Sbjct: 2   MSTS--AIDPVSFSLY-----------AKDFTRFAQELGASFERYGFAVLSDYDLDQARI 48

Query: 61  NDVKNITQKFFDLPYEEKIKIKLTPATGYRGYQRIGENITKG--IPDMHEAIDCYKEIQE 118
           +   +  + FF LP E K +       G RGY   G    KG    D+ E     +++  
Sbjct: 49  DAAVDSAKAFFALPVETKKQYAGVKG-GARGYIPFGVETAKGADHYDLKEFWHMGRDLPP 107

Query: 119 GMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVR 178
           G      +     N WP   P F+  +    N    +  K++  IA  L      F+   
Sbjct: 108 GHRF---RAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP-T 163

Query: 179 AGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGE 238
             D   VLR++ YP         K    +  GAH D   +TL+   +    LEV +  G+
Sbjct: 164 VQDGNSVLRLLHYPP------IPKDATGVRAGAHGDINTITLLLGAE-EGGLEVLDRDGQ 216

Query: 239 WISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSP----KYRVCVAYFYETNFDAA 294
           W+   P PG  V NIGDML+  +N +  ST+HRVVN  P      R    +F     D  
Sbjct: 217 WLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYE 276

Query: 295 VEPLDICKQRTGETKQFGRAVYGEHLVSKV 324
           ++ L  C       +        E L  ++
Sbjct: 277 IKTLQNCVTAENPDRYPESITADEFLQQRL 306
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query330
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 93.71
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 88.99
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 88.57
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 88.37
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 88.08
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 87.61
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 86.6
3i3q_A211 Alpha-ketoglutarate-dependent dioxygenase ALKB; be 83.02
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=2.3e-76  Score=540.17  Aligned_cols=298  Identities=25%  Similarity=0.380  Sum_probs=262.4

Q ss_pred             CCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhcccC
Q 020180            5 FKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKLT   84 (330)
Q Consensus         5 ~~~iPvIDls~l~~~~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~   84 (330)
                      +.+||||||+.+..           ++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++...
T Consensus         4 ~~~iPvIDls~~~~-----------~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~   72 (312)
T 3oox_A            4 TSAIDPVSFSLYAK-----------DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV   72 (312)
T ss_dssp             CCSSCCEETHHHHH-----------CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS
T ss_pred             CCCCCeEEChHhcc-----------cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC
Confidence            56799999999842           3778999999999999999999999999999999999999999999999999865


Q ss_pred             CCCCCcccccccccccC--CCCCchhhhhhccccccccccccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 020180           85 PATGYRGYQRIGENITK--GIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRG  162 (330)
Q Consensus        85 ~~~~~~GY~~~~~~~~~--~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~f~~~~~~~~~~~~~la~~ll~~  162 (330)
                       ...++||.+.+.+...  +..|++|+|.++.+.....   ......++|.||+.+++||+.+++|+++|.+++..||++
T Consensus        73 -~~~~~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~---~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~  148 (312)
T 3oox_A           73 -KGGARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGH---RFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEA  148 (312)
T ss_dssp             -GGGTSEEECCCCCCSTTSCSCCCCEEEEECCCCCTTC---GGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCccccccccceecCCCCCCCceeeeEeecCCCcCC---cchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             4567999988766542  4689999998876443211   011234689999989999999999999999999999999


Q ss_pred             HHHHhCCCCcccccccccCcccceeecccCCCCCCCCCCCCCCCcccccccCcCceEEEEeCCCCCceEEEcCCCCeEEc
Q 020180          163 IALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISA  242 (330)
Q Consensus       163 l~~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~H~D~~~lTll~~~~~~~GLqv~~~~g~W~~v  242 (330)
                      |+++||+++++|.+.+. .+.+.+|++||||++.      +...+|+++|||+|+||||+||+ ++||||++++|+|++|
T Consensus       149 la~~Lgl~~~~f~~~~~-~~~~~lr~~~Ypp~~~------~~~~~g~~~HtD~g~lTlL~qd~-v~GLqV~~~~g~W~~V  220 (312)
T 3oox_A          149 IATYLKLERDFFKPTVQ-DGNSVLRLLHYPPIPK------DATGVRAGAHGDINTITLLLGAE-EGGLEVLDRDGQWLPI  220 (312)
T ss_dssp             HHHHTTSCTTTTHHHHT-TCCCEEEEEEECCCSS------CCC--CEEEECCCSSEEEEECCT-TSCEEEECTTSCEEEC
T ss_pred             HHHHhCcCHHHHHHHhc-CCcceeeeEecCCCCC------CcCCcCccceecCceEEEEeEcC-cCceEEECCCCcEEEC
Confidence            99999999999988664 4568999999999987      22339999999999999999997 8999999889999999


Q ss_pred             CCCCCeEEEEhhhHHHHHhCCeecCccceeccCC----CCceEEEEEeeeCCCCceeecCccccccCCCCCCCC-cccHH
Q 020180          243 PPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSS----PKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFG-RAVYG  317 (330)
Q Consensus       243 ~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~~~~----~~~R~S~~~F~~P~~d~~i~p~~~~~~~~~~~~~~~-~~~~g  317 (330)
                      +|.+|++|||+||+|++||||+|+|++|||++++    ..+|||++||++|+.|++|+|+++|+. +++|++|+ ++|++
T Consensus       221 ~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~-~~~p~~y~~~~t~~  299 (312)
T 3oox_A          221 NPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVT-AENPDRYPESITAD  299 (312)
T ss_dssp             CCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCC-SSSCCSCSSCEEHH
T ss_pred             CCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccC-CCCcccCCCCeeHH
Confidence            9999999999999999999999999999998764    467999999999999999999999998 67899999 99999


Q ss_pred             HHHHHHHHh
Q 020180          318 EHLVSKVTT  326 (330)
Q Consensus       318 ~~~~~~~~~  326 (330)
                      ||+++|+..
T Consensus       300 eyl~~r~~~  308 (312)
T 3oox_A          300 EFLQQRLRE  308 (312)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999875
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 330
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 5e-56
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-55
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 5e-54
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 8e-46
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Deacetoxycephalosporin C synthase
species: Streptomyces clavuligerus [TaxId: 1901]

 Score =  182 bits (462), Expect = 5e-56
 Identities = 48/334 (14%), Positives = 99/334 (29%), Gaps = 40/334 (11%)

Query: 6   KSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKN 65
            ++P   ++ L    +     +         +  +  ++ G FY+   G+ ++ +   K+
Sbjct: 3   TTVPTFSLAEL----QQGLHQD---------EFRRCLRDKGLFYLTDCGLTDTELKSAKD 49

Query: 66  ITQKFFDLPYEEKIKIKLTPATG-YRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGAL 124
           +   FF+   E + +   +P     RG+  +    T  I +     D             
Sbjct: 50  LVIDFFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQITNTGSYSDYSM---------- 99

Query: 125 GKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFW 184
                G         +F  +  +Y +     SR + R +  A G  P             
Sbjct: 100 -CYSMGTADNLFPSGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDCEPL 158

Query: 185 VLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEV--RNMSGEWISA 242
           +            + +   E  +    H D  ++TL+ Q             + G +   
Sbjct: 159 LRFRYFPQ---VPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDL 215

Query: 243 PPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSP-----KYRVCVAYFYETNFDAAVEP 297
           P  P   +   G +  + + G  ++  H V            R    +F   N D     
Sbjct: 216 PYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFSV 275

Query: 298 -----LDICKQRTGETKQFGRAVYGEHLVSKVTT 326
                        GET  F   + G ++  + T+
Sbjct: 276 PLARECGFDVSLDGETATFQDWIGGNYVNIRRTS 309
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query330
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 93.36
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 83.3
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1e-70  Score=509.83  Aligned_cols=298  Identities=28%  Similarity=0.438  Sum_probs=253.6

Q ss_pred             CCCCCcEEeCCcCcccCCCCCCCCChhHHHHHHHHHHHHHhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhccc
Q 020180            4 DFKSIPIIDVSPLVAKCEDPKMAEDPGVSQVVKQLDKACKEAGFFYVKGHGIPESLINDVKNITQKFFDLPYEEKIKIKL   83 (330)
Q Consensus         4 ~~~~iPvIDls~l~~~~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~   83 (330)
                      +..+||||||+.|.++       +++.|++++++|.+||+++|||||+||||+.+++++++++++.||+||.|+|+++..
T Consensus        42 ~~~~IPvIDls~l~~~-------d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~  114 (349)
T d1gp6a_          42 DGPQVPTIDLKNIESD-------DEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYAN  114 (349)
T ss_dssp             CSCCCCEEECTTTTCS-------CHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBC
T ss_pred             CCCCcCeEEChhcCCC-------CHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhc
Confidence            4568999999999654       567789999999999999999999999999999999999999999999999999976


Q ss_pred             CCCC-CCcccccccccccCCCCCchhhhhhccccccccccccCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 020180           84 TPAT-GYRGYQRIGENITKGIPDMHEAIDCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRG  162 (330)
Q Consensus        84 ~~~~-~~~GY~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~f~~~~~~~~~~~~~la~~ll~~  162 (330)
                      .... .+.||.....+...+..++.+.+.....         ......+|.||+..+.|++.+++|++.|.+++..||++
T Consensus       115 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~  185 (349)
T d1gp6a_         115 DQATGKIQGYGSKLANNASGQLEWEDYFFHLAY---------PEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA  185 (349)
T ss_dssp             BGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEE---------SGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCccccccccccccccccchhhhhccccc---------ccccccccccccccchHHHHHHHHHHHHHHHHHhhhHH
Confidence            5332 2344433322323344444443321111         11123578999999999999999999999999999999


Q ss_pred             HHHHhCCCCcccccccc--cCcccceeecccCCCCCCCCCCCCCCCcccccccCcCceEEEEeCCCCCceEEEcCCCCeE
Q 020180          163 IALALGGSPFEFEGVRA--GDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWI  240 (330)
Q Consensus       163 l~~~Lgl~~~~~~~~~~--~~~~~~lr~~~Yp~~~~~~~~~~~~~~~~~~~H~D~~~lTll~~~~~~~GLqv~~~~g~W~  240 (330)
                      ++.+||+++++|.+.+.  +...+.+|++|||+++.      ....+|+++|||+|+||||+|+. ++||||+ .+|+|+
T Consensus       186 la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~------~~~~~g~~~HtD~g~lTlL~q~~-~~GLqv~-~~g~W~  257 (349)
T d1gp6a_         186 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQ------PELALGVEAHTDVSALTFILHNM-VPGLQLF-YEGKWV  257 (349)
T ss_dssp             HHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSS------TTTCCSEEEECCCSSEEEEEECS-CCCEEEE-ETTEEE
T ss_pred             HHHHcCCCHHHHHHHhccccccceeeeecccccccc------hhhccccccCCCCcceEEEeccC-Ccceeee-cCCceE
Confidence            99999999999887543  34567899999999987      66778999999999999999998 8999997 579999


Q ss_pred             EcCCCCCeEEEEhhhHHHHHhCCeecCccceeccCCCCceEEEEEeeeCCCCcee-ecCccccccCCCCCCCCcccHHHH
Q 020180          241 SAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAV-EPLDICKQRTGETKQFGRAVYGEH  319 (330)
Q Consensus       241 ~v~~~~g~~iVn~Gd~l~~~T~G~~~s~~HRV~~~~~~~R~S~~~F~~P~~d~~i-~p~~~~~~~~~~~~~~~~~~~g~~  319 (330)
                      +|+|.+|++|||+||+|++||||+|+||+|||+.+++.+||||+||++|+.|++| +|+++|++ .++|++|+++|+|||
T Consensus       258 ~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~-~~~p~~y~~~t~~e~  336 (349)
T d1gp6a_         258 TAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVS-VESPAKFPPRTFAQH  336 (349)
T ss_dssp             ECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCC-SSSCCSSCCEEHHHH
T ss_pred             EccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcC-CCCCCCCCCccHHHH
Confidence            9999999999999999999999999999999999888899999999999999865 89999999 788999999999999


Q ss_pred             HHHHHHh
Q 020180          320 LVSKVTT  326 (330)
Q Consensus       320 ~~~~~~~  326 (330)
                      +++|+..
T Consensus       337 ~~~rl~~  343 (349)
T d1gp6a_         337 IEHKLFG  343 (349)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            9999843
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure