Citrus Sinensis ID: 020187

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
MELYMRLLWGSALALALWINLASAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTGGCQSQCSGSPSPRPTKPTPVPAPSGGGNNIGSLISRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFGTTGDTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIECGKGSNPNAEDRIGFYKRYCDILKVSYGNNLDCNNQRPFNA
cHHHHHHHHHHHHHHHHHHHHHcccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccHHHcccEEEEEccccccccccccccccccccHHHHHcccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccc
**LYMRLLWGSALALALWINLASAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTGGCQSQCS************VPAPSGGGNNIGSLISRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFGTTGDTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIECGKGSNPNAEDRIGFYKRYCDILKVSYGNNLDCNNQRPF**
xxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MELYMRLLWGSALALALWINLASAEQCGSQAGGAVCPGGLCCSKFGFCGNTPAYCTGGCQSQCSGSPSPRPTKPTPVPAPSGGGNNIGSLISRDLFEQLLKHRNDAACQGKGFYTYDAFIAAAKSFGAFGTTGDTDTRKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFKQEQGNPGDYCQPSQQWPCAPGKKYFGRGPIQISYNYNYGPAGKAINVDLLGNPDAVANDPTISFKTAFWFWMTPQSPKPSCHDVITGQWKPSASDTQAGRLPGYGVVTNIINGGIECGKGSNPNAEDRIGFYKRYCDILKVSYGNNLDCNNQRPFNA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Endochitinase A Defense against chitin containing fungal pathogens.probableP08252
Basic 30 kDa endochitinase Defense against chitin containing fungal pathogens.probableQ05538
Basic endochitinase B Defense against chitin containing fungal pathogens. Seems particularly implicated in resistance to jasmonate-inducing pathogens such as A.brassicicola. In vitro antifungal activity against T.reesei, but not against A.solani, F.oxysporum, S.sclerotiorum, G.graminis and P.megasperma.probableP19171

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.2.-.-Glycosylases.probable
3.2.1.-Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds.probable
3.2.1.14Chitinase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DKV, chain A
Confidence level:very confident
Coverage over the Query: 25-66,85-328
View the alignment between query and template
View the model in PyMOL