Citrus Sinensis ID: 020205

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
MEMSLTASSFSKPLFFSNQSLSKTHFLTAANNTNTSTTIKTRRPTCIKAANSSPSIAQTLSTNWDVSNFAVNNNTSSPYLPKFEELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKPGLVAPTSEAIPPPKPRVWHMWNIEGSRKAKKKLPSEHNLLQNGNIGGQGGGEDRGTEEEKKESAPV
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccEEEccccccHHHHHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccHHHHHHccccHHHccccccccccccccccccccccccccccccccHHHHccccccHHHccccccccccccccccccccccccccc
************************************************************S****VSNFAVNNNTSSPYLPKFEELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGK*GLV************RVWHMWNI*******************************************
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MEMSLTASSFSKPLFFSNQSLSKTHFLTAANNTNTSTTIKTRRPTCIKAANSSPSIAQTLSTNWDVSNFAVNNNTSSPYLPKFEELDTTNMLLRQRIIFLGSQVDDLTADFIISQLLFLDAEDSKKDIRLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLAAGSKGKRYCMPNARVMIHQPLGTAGGKATDMSIRIREMSYHKVKLNKILSRATGKPVQQIELDTDRDNFMDAWEAKEYGLVDAVIDDGKPGLVAPTSEAIPPPKPRVWHMWNIEGSRKAKKKLPSEHNLLQNGNIGGQGGGEDRGTEEEKKESAPV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
ATP-dependent Clp protease proteolytic subunit 3, chloroplastic Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.confidentQ9SXJ6

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.4.-.-Acting on peptide bonds (peptide hydrolases).probable
3.4.21.-Serine endopeptidases.probable
3.4.21.92Endopeptidase Clp.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2F6I, chain A
Confidence level:very confident
Coverage over the Query: 84-262
View the alignment between query and template
View the model in PyMOL