Citrus Sinensis ID: 020224

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
Protein Sequence
MGWRRGEEREEGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSATKKSE
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEccccccHHHHHHHHHHcccHHHccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccccccccccEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccEcccccccccccccEEEEccccccHHHHHHHHHHcHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccEEcccHHHHHHHHHccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHccHEcccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccHHHHHHHEEEcccccEEEEccccEEEEEEcccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccccccccHHEEEccccccccc
Coil and Loop (DISEMBL)
mgwrrgeereegvmaadffwsytdephasrRRQILSQYpqikelfgpdpwafpKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELShnlafstpayNRWLGilanlpvgvpmsvTFQKYhlehhrfqgvdgidmdipsltetrMVTNVVAKSIWVIFQLLFYafrpvflkpkppgyweFINFSIQIALDITIVYFWGWKSFAYLILSTfvgggmhpmaghfisehyvfnpdqetysyygplnfltwhvgyhnehhdfpripgnklhkvreVAPEYYQGLASYKSWSQVIYMYIMDrtvgpfsrmkrkpsatkkse
Flexible Loop (DISEMBL)
mgwrrgeereegvmaadFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRtvgpfsrmkrkpsatkkse
Low Complexity Region (SEG)
MgwrrgeereegVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSATKKSE
Disordered region (IsUnstruct)
************VMAADFFWSYTDEPHA*RRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVG****************
Disordered Region (DISOPRED)
****************DFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGP***************
Disordered Region (DISEMBL)
**********EGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFS*************
Disordered Region (DISPRO)
************VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPS******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGWRRGEEREEGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSATKKSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	329	2.2.26 [Sep-21-2011]
Q3ZBY7	323	Sphingolipid delta(4)-des	yes	no	0.963	0.981	0.520	2e-92
Q6UQ04	323	Sphingolipid delta(4)-des	N/A	no	0.963	0.981	0.507	1e-90
O15121	323	Sphingolipid delta(4)-des	yes	no	0.936	0.953	0.519	3e-90
Q5RE51	323	Sphingolipid delta(4)-des	yes	no	0.936	0.953	0.519	9e-90
Q5XIF5	323	Sphingolipid delta(4)-des	yes	no	0.963	0.981	0.498	6e-89
Q5F3C1	323	Sphingolipid delta(4)-des	yes	no	0.963	0.981	0.485	3e-87
O09005	323	Sphingolipid delta(4)-des	yes	no	0.963	0.981	0.501	3e-87
G5EC63	362	Putative sphingolipid del	yes	no	0.963	0.875	0.467	3e-87
Q68FB8	323	Sphingolipid delta(4)-des	no	no	0.951	0.969	0.485	6e-86
O44186	360	Putative sphingolipid del	no	no	0.927	0.847	0.511	2e-84

>sp|Q3ZBY7|DEGS1_BOVIN Sphingolipid delta(4)-desaturase DES1 OS=Bos taurus GN=DEGS1 PE=2 SV=1

 Score =  339 bits (869), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 166/319 (52%), Positives = 214/319 (67%), Gaps = 2/319 (0%)

Query: 13  VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
           V   DF W YTD+PHA+RR++IL++YP+IK L  PD      V ++VL Q     L+ D 
Sbjct: 5   VSREDFEWVYTDQPHATRRQEILAKYPEIKSLMKPDSNLIWIVIMMVLTQFVAFYLVKDL 64

Query: 73  GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTF 130
            W  +L  AY FGS +NH++ LAIHE+SHN AF      +NRW GI ANLP+GVP SV+F
Sbjct: 65  DWKWVLFWAYAFGSCVNHSMTLAIHEVSHNSAFGHYKAMWNRWFGIFANLPIGVPYSVSF 124

Query: 131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
           ++YH++HHR+ G DGID+DIP+  E         K IWVI Q LFYAFRP+F+ PKP  Y
Sbjct: 125 KRYHMDHHRYLGADGIDVDIPTDFEGWFFCTTFRKFIWVILQPLFYAFRPLFINPKPISY 184

Query: 191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
            E IN  IQI  DI + Y  G KS  Y++ ++  G G+HP++GHFI+EHY+F    ETYS
Sbjct: 185 LEIINTVIQITFDIVVYYVLGVKSLVYMLAASLFGLGLHPISGHFIAEHYMFLKGHETYS 244

Query: 251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
           YYGPLN LT++VGYHNEHHDFP IPG  L  VR++A EYY  L  Y SW +V+Y ++ D 
Sbjct: 245 YYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDFVTDD 304

Query: 311 TVGPFSRMKRKPSATKKSE 329
           T+ P+SRMKR     +  E
Sbjct: 305 TISPYSRMKRHLKGNEVQE 323

Has sphingolipid-delta-4-desaturase activity. Converts D-erythro-sphinganine to D-erythro-sphingosine (E-sphing-4-enine).
Bos taurus (taxid: 9913)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -

>sp|Q6UQ04|DEGS1_MICFO Sphingolipid delta(4)-desaturase DES1 OS=Microtus fortis GN=DEGS1 PE=2 SV=1

 Score =  333 bits (854), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 162/319 (50%), Positives = 218/319 (68%), Gaps = 2/319 (0%)

Query: 13  VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
           V   +F W YTD+PH  RRR+IL++YP+IK L  PDP     +T + L+QL +  L+ D 
Sbjct: 5   VSREEFEWVYTDQPHTDRRREILAKYPEIKSLMKPDPNLIWIITAMFLVQLISLYLVKDL 64

Query: 73  GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTF 130
            W  ++  +Y FGS LNH++ LAIHE+SHN  F      +NRW GI ANLP+GVP SV+F
Sbjct: 65  DWKWVIFWSYVFGSCLNHSMTLAIHEISHNFPFGHHKAVWNRWFGIFANLPIGVPYSVSF 124

Query: 131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
           ++YH++HHR+ G DGID+DIP+  E         K +WVI Q LFYA RP+F+ PKP  Y
Sbjct: 125 KRYHMDHHRYLGADGIDVDIPTDFEGWFFCTTFRKLVWVILQPLFYALRPLFINPKPITY 184

Query: 191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
            E IN   QI LDI + Y +G KS  Y++ ++ +G G+HP++GHFI+EHY+F    ETYS
Sbjct: 185 LEIINTVTQIILDIIVYYVFGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYS 244

Query: 251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
           YYGPLN LT++VGYHNEHHDFP +PG  L  VR++A EYY  L  Y SW +V+Y ++MD 
Sbjct: 245 YYGPLNLLTFNVGYHNEHHDFPNVPGKNLPLVRKIAAEYYDKLPQYNSWIKVLYDFVMDD 304

Query: 311 TVGPFSRMKRKPSATKKSE 329
           T+ P+SRMKR P  ++  +
Sbjct: 305 TISPYSRMKRPPKGSENLD 323

Has sphingolipid-delta-4-desaturase activity. Converts D-erythro-sphinganine to D-erythro-sphingosine (E-sphing-4-enine).

Microtus fortis (taxid: 100897)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|O15121|DEGS1_HUMAN Sphingolipid delta(4)-desaturase DES1 OS=Homo sapiens GN=DEGS1 PE=1 SV=1

 Score =  332 bits (850), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 161/310 (51%), Positives = 215/310 (69%), Gaps = 2/310 (0%)

Query: 13  VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
           V   DF W YTD+PHA RRR+IL++YP+IK L  PDP     + ++VL QL    ++ D 
Sbjct: 5   VSREDFEWVYTDQPHADRRREILAKYPEIKSLMKPDPNLIWIIIMMVLTQLGAFYIVKDL 64

Query: 73  GWLKILATAYFFGSFLNHNLFLAIHELSHNLAF--STPAYNRWLGILANLPVGVPMSVTF 130
            W  ++  AY FGS +NH++ LAIHE++HN AF      +NRW G+ ANLP+G+P S++F
Sbjct: 65  DWKWVIFGAYAFGSCINHSMTLAIHEIAHNAAFGNCKAMWNRWFGMFANLPIGIPYSISF 124

Query: 131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
           ++YH++HHR+ G DG+D+DIP+  E         K IWVI Q LFYAFRP+F+ PKP  Y
Sbjct: 125 KRYHMDHHRYLGADGVDVDIPTDFEGWFFCTAFRKFIWVILQPLFYAFRPLFINPKPITY 184

Query: 191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
            E IN   Q+  DI I YF G KS  Y++ ++ +G G+HP++GHFI+EHY+F    ETYS
Sbjct: 185 LEVINTVAQVTFDILIYYFLGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYS 244

Query: 251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
           YYGPLN LT++VGYHNEHHDFP IPG  L  VR++A EYY  L  Y SW +V+Y ++MD 
Sbjct: 245 YYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDFVMDD 304

Query: 311 TVGPFSRMKR 320
           T+ P+SRMKR
Sbjct: 305 TISPYSRMKR 314

Has sphingolipid-delta-4-desaturase activity. Converts D-erythro-sphinganine to D-erythro-sphingosine (E-sphing-4-enine).

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q5RE51|DEGS1_PONAB Sphingolipid delta(4)-desaturase DES1 OS=Pongo abelii GN=DEGS1 PE=2 SV=1

 Score =  330 bits (846), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 161/310 (51%), Positives = 213/310 (68%), Gaps = 2/310 (0%)

Query: 13  VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
           V   DF W YTD+PHA RRR+IL++YP+IK L  PDP     + ++VL QL    ++ D 
Sbjct: 5   VSREDFEWVYTDQPHADRRREILAKYPEIKSLMKPDPNLIWIIIMMVLTQLAAFYIVKDL 64

Query: 73  GWLKILATAYFFGSFLNHNLFLAIHELSHNLAF--STPAYNRWLGILANLPVGVPMSVTF 130
            W  ++  AY FGS +NH++ L IHE++HN AF      +NRW G+ ANLP+G+P SV+F
Sbjct: 65  DWKWVIFGAYAFGSCINHSMTLGIHEIAHNAAFGNCKAMWNRWFGMFANLPIGIPYSVSF 124

Query: 131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
           + YH++HHR+ G DG+D+DIP+  E         K IWVI Q LFYAFRP+F+ PKP  Y
Sbjct: 125 KSYHMDHHRYLGADGVDVDIPTDFEGWFFCTAFRKFIWVILQPLFYAFRPLFINPKPITY 184

Query: 191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
            E IN   Q+  DI I YF G KS  Y++ ++ +G G+HP++GHFI+EHY+F    ETYS
Sbjct: 185 LEVINTVAQVTFDILIYYFLGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYS 244

Query: 251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
           YYGPLN LT++VGYHNEHHDFP IPG  L  VR++A EYY  L  Y SW +V+Y ++MD 
Sbjct: 245 YYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDFVMDD 304

Query: 311 TVGPFSRMKR 320
           T+ P+SRMKR
Sbjct: 305 TISPYSRMKR 314

Has sphingolipid-delta-4-desaturase activity. Converts D-erythro-sphinganine to D-erythro-sphingosine (E-sphing-4-enine).

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q5XIF5|DEGS1_RAT Sphingolipid delta(4)-desaturase DES1 OS=Rattus norvegicus GN=Degs1 PE=2 SV=1

 Score =  327 bits (839), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 159/319 (49%), Positives = 221/319 (69%), Gaps = 2/319 (0%)

Query: 13  VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
           V   +F W YTD+PHA+RR++IL++YP+IK L  PDP     VT ++L+QL +  L+ D 
Sbjct: 5   VSREEFEWVYTDQPHAARRQEILAKYPEIKSLMKPDPNLIWIVTSMLLVQLASFYLVKDL 64

Query: 73  GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTF 130
            W  ++  +Y FGS LNH++ LAIHE+SHN  F      +NRW G+ ANL +GVP S++F
Sbjct: 65  DWKWLMFWSYAFGSCLNHSMTLAIHEISHNFPFGHHKAMWNRWFGMFANLSLGVPYSISF 124

Query: 131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
           ++YH++HHR+ G DGID+DIP+  E       + K +WVI Q LFYAFRP+F+ PKP  +
Sbjct: 125 KRYHMDHHRYLGADGIDVDIPTDFEGWFFCTTLRKLVWVILQPLFYAFRPLFINPKPITH 184

Query: 191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
            E IN  IQ+  D+ + Y +G KS  Y++ ++ +G G+HP++GHFI+EHY+F    ETYS
Sbjct: 185 LEVINTVIQVTFDVLVYYVFGVKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYS 244

Query: 251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
           YYGPLN LT++VGYHNEHHDFP +PG  L  VR++A EYY  L  Y SW +V+Y ++MD 
Sbjct: 245 YYGPLNLLTFNVGYHNEHHDFPNVPGKNLPLVRKIASEYYDNLPHYNSWIRVLYDFVMDD 304

Query: 311 TVGPFSRMKRKPSATKKSE 329
           T+ P+SRMKR P   +  E
Sbjct: 305 TISPYSRMKRPPKGNEIQE 323

Has sphingolipid-delta-4-desaturase activity. Converts D-erythro-sphinganine to D-erythro-sphingosine (E-sphing-4-enine).

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q5F3C1|DEGS1_CHICK Sphingolipid delta(4)-desaturase DES1 OS=Gallus gallus GN=DEGS1 PE=2 SV=1

 Score =  322 bits (825), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/319 (48%), Positives = 211/319 (66%), Gaps = 2/319 (0%)

Query: 13  VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
           V   DF W YTD+PHA RR++IL+++P+IK L  PD      V ++V  QL    L+ D 
Sbjct: 5   VAREDFEWVYTDQPHADRRKEILAKHPEIKALMKPDYNLIWVVMLMVAAQLTAFYLVRDL 64

Query: 73  GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSVTF 130
            W  ++  AY FGS ++H++ LAIHE+SHN AF      +NRW GI ANLP+G+P S++F
Sbjct: 65  DWKWVVFWAYVFGSCISHSMTLAIHEISHNSAFGNGRAMWNRWFGIFANLPLGLPYSISF 124

Query: 131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
           ++YH++HHR+ G DGID+DIP+  E         K IW++ Q  FYA RP+ + PKP   
Sbjct: 125 KRYHMDHHRYLGGDGIDVDIPTNFEGWFFCTRFRKFIWIVLQPFFYAIRPLCINPKPITR 184

Query: 191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
            E IN   Q+  DI I Y WG KS  Y++  + +G G+HP++GHFI+EHY+F    ETYS
Sbjct: 185 LEIINLLAQLFFDIVIYYLWGAKSIFYMLAGSVLGLGLHPISGHFIAEHYMFLKGHETYS 244

Query: 251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
           YYGPLN LT++VGYHNEHHDFP IPG  L  V+++A EYY  L  Y SW +V+Y ++MD 
Sbjct: 245 YYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVKKIAAEYYDNLPQYNSWIKVLYDFVMDD 304

Query: 311 TVGPFSRMKRKPSATKKSE 329
           T+ P+SRMKR+     K +
Sbjct: 305 TISPYSRMKRQLKGEVKQD 323

Has sphingolipid-delta-4-desaturase activity. Converts D-erythro-sphinganine to D-erythro-sphingosine (E-sphing-4-enine).

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|O09005|DEGS1_MOUSE Sphingolipid delta(4)-desaturase DES1 OS=Mus musculus GN=Degs1 PE=2 SV=1

 Score =  322 bits (824), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 160/319 (50%), Positives = 217/319 (68%), Gaps = 2/319 (0%)

Query: 13  VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
           V   +F W YTD+PHA+RR++IL++YP+IK L  PD      V +++L+QL +  L+ D 
Sbjct: 5   VSREEFEWVYTDQPHAARRKEILAKYPEIKSLMKPDHNLIWIVAMMLLVQLASFYLVKDL 64

Query: 73  GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTF 130
            W  ++  +Y FGS LNH++ LAIHE+SHN  F      +NRW G+ ANL +GVP S++F
Sbjct: 65  DWKWVIFWSYVFGSCLNHSMTLAIHEISHNFPFGHHKALWNRWFGMFANLSLGVPYSISF 124

Query: 131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
           ++YH++HHR+ G D ID+DIP+  E         K +WVI Q LFYAFRP+F+ PKP  Y
Sbjct: 125 KRYHMDHHRYLGADKIDVDIPTDFEGWFFCTTFRKFVWVILQPLFYAFRPLFINPKPITY 184

Query: 191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
            E IN  IQI  DI I Y +G KS  Y++ +T +G G+HP++GHFI+EHY+F    ETYS
Sbjct: 185 LEIINTVIQITFDIIIYYVFGVKSLVYMLAATLLGLGLHPISGHFIAEHYMFLKGHETYS 244

Query: 251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
           YYGPLN LT++VGYHNEHHDFP +PG  L  VR++A EYY  L  Y SW +V+Y ++ D 
Sbjct: 245 YYGPLNLLTFNVGYHNEHHDFPNVPGKNLPMVRKIASEYYDDLPHYNSWIKVLYDFVTDD 304

Query: 311 TVGPFSRMKRKPSATKKSE 329
           T+ P+SRMKR P   +  E
Sbjct: 305 TISPYSRMKRPPKGNEILE 323

Has sphingolipid-delta-4-desaturase activity. Converts D-erythro-sphinganine to D-erythro-sphingosine (E-sphing-4-enine).

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|G5EC63|DEGS2_CAEEL Putative sphingolipid delta(4)-desaturase/C4-hydroxylase OS=Caenorhabditis elegans GN=ttm-5 PE=3 SV=1

 Score =  322 bits (824), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 149/319 (46%), Positives = 213/319 (66%), Gaps = 2/319 (0%)

Query: 11  EGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLH 70
           + V   DF W+ T++PH SRR +I+ +YP++K+LFG DP     V+ +V+ Q++   LL 
Sbjct: 3   QSVSRDDFIWTLTEQPHMSRREEIVKKYPEVKKLFGVDPSLKYVVSSLVIFQIFMCWLLQ 62

Query: 71  DAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSV 128
           DA W+ I+  AYF G  +NH + LAIH++SHN AF    P  NR+ G+ ANLP+ VP+SV
Sbjct: 63  DADWILIILEAYFCGGIINHAMTLAIHDISHNTAFGNKYPLKNRFFGMWANLPIAVPISV 122

Query: 129 TFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPP 188
           +F+KYH+EHHR+ G DG+D D+P+  E    T    K +W+  Q  FY FRP+ +  K P
Sbjct: 123 SFKKYHVEHHRYLGEDGLDTDVPTTFEAEFFTTAPRKLLWLALQPFFYGFRPLIIYKKAP 182

Query: 189 GYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQET 248
              E +N  IQI+ D+ I++F+G KS  YL+  T +  G+HP AGHFISEHY F  DQET
Sbjct: 183 TDMEILNAIIQISFDLLILHFFGVKSLFYLLFGTIISMGLHPSAGHFISEHYAFKEDQET 242

Query: 249 YSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIM 308
           +SYYG  N  T++VGYH EHHDFP IPG  L K+R +APEYY+ L  + S  Q++  +++
Sbjct: 243 FSYYGLWNLCTFNVGYHVEHHDFPYIPGRDLPKLRAMAPEYYENLLKHTSMMQILTEFVV 302

Query: 309 DRTVGPFSRMKRKPSATKK 327
           +  +GP++R+KRKP   ++
Sbjct: 303 NPAMGPYARLKRKPRVAQE 321

Bifunctional enzyme which acts as both a sphingolipid delta(4)-desaturase and a sphingolipid C4-hydroxylase.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q68FB8|DEGS1_XENTR Sphingolipid delta(4)-desaturase DES1 OS=Xenopus tropicalis GN=degs1 PE=2 SV=1

 Score =  317 bits (813), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 153/315 (48%), Positives = 212/315 (67%), Gaps = 2/315 (0%)

Query: 17  DFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLK 76
           DF W YTD+PHA RR++IL++YP+IK L  PD      V+++VL QL    L+ D  W  
Sbjct: 9   DFEWVYTDQPHADRRKEILAKYPEIKSLMKPDHNLIWIVSLMVLTQLVAFYLVKDLDWKW 68

Query: 77  ILATAYFFGSFLNHNLFLAIHELSHNLAF--STPAYNRWLGILANLPVGVPMSVTFQKYH 134
           +L   Y  GS ++H++ LAIHE+SHN AF  S   +NR  G+ ANLP+G+P SV+F++YH
Sbjct: 69  LLFWTYVVGSCISHSMTLAIHEISHNSAFGNSKAMWNRCFGMFANLPLGLPYSVSFKRYH 128

Query: 135 LEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFI 194
           ++HHR+ G DG+D+DIP+  E       + K +W+I Q LFY  RP+ + PKP    E I
Sbjct: 129 MDHHRYLGGDGVDVDIPTDFEGWFFCTPLRKLVWIILQPLFYTIRPLCINPKPITRLEII 188

Query: 195 NFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGP 254
           N  +Q + D  I Y  G K+  Y+++ + +G G+HP++GHFI+EHY+F    ETYSYYGP
Sbjct: 189 NLVVQFSFDALIYYTLGGKALFYMLVGSILGLGLHPISGHFIAEHYMFLKGHETYSYYGP 248

Query: 255 LNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGP 314
           LN+LT++VGYHNEHHDFP +PG  L  VR++A EYY  L  Y SW +V+Y ++MD T+ P
Sbjct: 249 LNYLTFNVGYHNEHHDFPSVPGKNLPLVRKIAAEYYDPLPKYSSWVKVLYDFVMDDTLSP 308

Query: 315 FSRMKRKPSATKKSE 329
           +SRMKRK     K E
Sbjct: 309 YSRMKRKLKGDLKLE 323

Has sphingolipid-delta-4-desaturase activity. Converts D-erythro-sphinganine to D-erythro-sphingosine (E-sphing-4-enine).

Xenopus tropicalis (taxid: 8364)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|O44186|DEGS1_CAEEL Putative sphingolipid delta(4)-desaturase OS=Caenorhabditis elegans GN=F33D4.4 PE=3 SV=1

 Score =  312 bits (799), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 157/307 (51%), Positives = 204/307 (66%), Gaps = 2/307 (0%)

Query: 17  DFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLK 76
           DF W+YT+EPHASRR++IL++YPQIKELFG D    P V  +V+ Q+  A LL D+ WL 
Sbjct: 10  DFSWAYTEEPHASRRKEILAKYPQIKELFGQDKAFRPVVVCMVIAQIVFAYLLRDSDWLL 69

Query: 77  ILATAYFFGSFLNHNLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSVTFQKYH 134
           IL  AYF    +NH+L LA+HE+SHN AF T  P  NR  G +ANLP+ +PMS++F+KYH
Sbjct: 70  ILFQAYFVSGTINHSLTLAVHEISHNQAFGTNRPLANRIFGFIANLPMCIPMSISFKKYH 129

Query: 135 LEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFI 194
           LEHHR  G D ID D+P+  E ++    + K IW+  Q LFY  RP  L PK     E I
Sbjct: 130 LEHHRNLGEDVIDTDVPTEFEAKVFRTWLGKMIWMSLQPLFYGIRPFMLYPKSMTDLELI 189

Query: 195 NFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGP 254
           N +IQ+     I   +G KSF +L     +G G+HP AGHF+SEHYVF  DQETYSYYGP
Sbjct: 190 NVAIQLLFSTFIYTQFGAKSFFFLFGGLVLGMGLHPCAGHFVSEHYVFKKDQETYSYYGP 249

Query: 255 LNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGP 314
           +N + ++VGYH EHHDFP I G+ L KVRE+APEYYQ   ++ SW  ++  +I +  +  
Sbjct: 250 INMVVFNVGYHVEHHDFPYITGSNLPKVREIAPEYYQDWQTHDSWVGMMADFIFNPKMTL 309

Query: 315 FSRMKRK 321
             R+KRK
Sbjct: 310 RKRIKRK 316

Acts as a sphingolipid delta(4)-desaturase.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
224125292	331	predicted protein [Populus trichocarpa]	1.0	0.993	0.870	1e-169
255556017	334	sphingolipid delta 4 desaturase/C-4 hydr	0.987	0.973	0.852	1e-165
449457719	324	PREDICTED: sphingolipid delta(4)-desatur	0.975	0.990	0.845	1e-163
359497083	327	PREDICTED: sphingolipid delta(4)-desatur	0.981	0.987	0.832	1e-161
358248806	324	uncharacterized protein LOC100792937 [Gl	0.978	0.993	0.822	1e-160
388508932	327	unknown [Lotus japonicus]	0.954	0.960	0.863	1e-160
15234510	332	sphingolipid delta-4 desaturase [Arabido	0.969	0.960	0.818	1e-158
357446491	328	Sphingolipid delta(4)-desaturase DES1 [M	0.954	0.957	0.840	1e-158
388507808	328	unknown [Medicago truncatula]	0.954	0.957	0.840	1e-158
350534880	332	uncharacterized protein LOC543709 [Solan	0.960	0.951	0.845	1e-157

>gi|224125292|ref|XP_002329769.1| predicted protein [Populus trichocarpa] gi|118483650|gb|ABK93719.1| unknown [Populus trichocarpa] gi|222870831|gb|EEF07962.1| predicted protein [Populus trichocarpa]

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 288/331 (87%), Positives = 305/331 (92%), Gaps = 2/331 (0%)

Query: 1   MGWRRG-EEREEGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVV 59
           MG R   E++EEGVMA DFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAF K+TVVV
Sbjct: 1   MGMREEMEQKEEGVMATDFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFFKITVVV 60

Query: 60  LLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILAN 119
            LQL+TATLLHDAGWLK+LA AYFFGSFLNHNLFLAIHELSHNLAFSTP YNR LGI AN
Sbjct: 61  SLQLWTATLLHDAGWLKMLAIAYFFGSFLNHNLFLAIHELSHNLAFSTPVYNRCLGIFAN 120

Query: 120 LPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFR 179
           LPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPS  ET +VTNVVAKSIWV+ QL FYAFR
Sbjct: 121 LPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSRAETLLVTNVVAKSIWVMLQLFFYAFR 180

Query: 180 PVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEH 239
           P+F+KPKPPGYWEFINFSIQIALD  +VYFWGW+S AYLILSTFVGGGMHPMAGHFISEH
Sbjct: 181 PLFIKPKPPGYWEFINFSIQIALDAAVVYFWGWRSLAYLILSTFVGGGMHPMAGHFISEH 240

Query: 240 YVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSW 299
           YVF P+QETYSYYGPLNFLTWHVGYHNEHHDFPRIPG+KLHKV+++APEYY GL SYKSW
Sbjct: 241 YVFKPEQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGSKLHKVKDIAPEYYDGLESYKSW 300

Query: 300 SQVIYMYIMDRTVGPFSRMKRK-PSATKKSE 329
           SQVIYMY+MDRTVGPFSRMKRK P   KKSE
Sbjct: 301 SQVIYMYLMDRTVGPFSRMKRKVPGTAKKSE 331

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556017|ref|XP_002519043.1| sphingolipid delta 4 desaturase/C-4 hydroxylase protein des2, putative [Ricinus communis] gi|223541706|gb|EEF43254.1| sphingolipid delta 4 desaturase/C-4 hydroxylase protein des2, putative [Ricinus communis]

 Score =  586 bits (1510), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 283/332 (85%), Positives = 301/332 (90%), Gaps = 7/332 (2%)

Query: 5   RGEERE------EGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVV 58
           +G ER       EGVMA DFFWSYTDEPHASRRRQILSQYPQIK+LFGPDP+AF KV+VV
Sbjct: 3   KGGERHVEEEEAEGVMATDFFWSYTDEPHASRRRQILSQYPQIKQLFGPDPFAFFKVSVV 62

Query: 59  VLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILA 118
           VLLQL TA LLHD+GWLKILA AYFFGSFLNHNLFLAIHELSHNLAFSTP YNRWLGI A
Sbjct: 63  VLLQLGTAALLHDSGWLKILAIAYFFGSFLNHNLFLAIHELSHNLAFSTPVYNRWLGIFA 122

Query: 119 NLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAF 178
           NLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPS  E  +V NV+ KSIWVIFQL FYA 
Sbjct: 123 NLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSQIEAHLVRNVITKSIWVIFQLFFYAL 182

Query: 179 RPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISE 238
           RP+FLKPKPPGYWEFIN  +QIALD+ +VYFWGWKSFAYLILSTFVGGGMHPMA HFISE
Sbjct: 183 RPLFLKPKPPGYWEFINLFVQIALDVAMVYFWGWKSFAYLILSTFVGGGMHPMAAHFISE 242

Query: 239 HYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKS 298
           HYVFNP+QETYSYYGPLNF+TWHVGYHNEHHDFPRIPG+KLHKV+E+APEYY+GL SYKS
Sbjct: 243 HYVFNPEQETYSYYGPLNFVTWHVGYHNEHHDFPRIPGSKLHKVKEIAPEYYEGLDSYKS 302

Query: 299 WSQVIYMYIMDRTVGPFSRMKRKPS-ATKKSE 329
           WSQVIYMY+MDRTVGPFSRMKRK S  TKKSE
Sbjct: 303 WSQVIYMYVMDRTVGPFSRMKRKVSTTTKKSE 334

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457719|ref|XP_004146595.1| PREDICTED: sphingolipid delta(4)-desaturase DES1-like [Cucumis sativus] gi|449527797|ref|XP_004170896.1| PREDICTED: sphingolipid delta(4)-desaturase DES1-like [Cucumis sativus]

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 274/324 (84%), Positives = 298/324 (91%), Gaps = 3/324 (0%)

Query: 6   GEEREEGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYT 65
           GEER++GVMA DFFWSYTDEPHASRRRQILSQYPQI+ELFGPDPWAF K++VVVLLQL+T
Sbjct: 4   GEERDDGVMATDFFWSYTDEPHASRRRQILSQYPQIRELFGPDPWAFFKISVVVLLQLWT 63

Query: 66  ATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVP 125
           AT LH A WLKILA AYFFGSFLNHNLFLAIHELSHNLAFSTP YN+WLGI ANLP+GVP
Sbjct: 64  ATTLHSADWLKILAIAYFFGSFLNHNLFLAIHELSHNLAFSTPDYNKWLGIFANLPIGVP 123

Query: 126 MSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKP 185
           MS+TFQKYHLEHHRFQGVDG+DMD+PS TE  +VTNVV+K+IWVIFQL FYA RP+FLKP
Sbjct: 124 MSITFQKYHLEHHRFQGVDGMDMDVPSQTEAHLVTNVVSKAIWVIFQLFFYALRPLFLKP 183

Query: 186 KPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPD 245
           KPPG+WEFINF IQIALD+ +VYFW WKSFAYLILSTFVGGGMHPMAGHFISEHYVFNP 
Sbjct: 184 KPPGHWEFINFIIQIALDVAMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPK 243

Query: 246 QETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYM 305
           QETYSYYGPLN LTW VGYHNEHHDFPRIPG+KL+KV+E+APEYY  L SYKSWSQVIYM
Sbjct: 244 QETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEIAPEYYNELDSYKSWSQVIYM 303

Query: 306 YIMDRTVGPFSRMKRKPSATKKSE 329
           YIMD+TVGPFSRMKR P   +KSE
Sbjct: 304 YIMDKTVGPFSRMKRMP---RKSE 324

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497083|ref|XP_003635420.1| PREDICTED: sphingolipid delta(4)-desaturase DES1-like [Vitis vinifera]

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 269/323 (83%), Positives = 289/323 (89%)

Query: 6   GEEREEGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYT 65
           GEEREEGVMA DFFWSYTDEPHASRRRQILSQYPQIK+LFGPDP+AF KV  VVLLQL T
Sbjct: 3   GEEREEGVMANDFFWSYTDEPHASRRRQILSQYPQIKDLFGPDPFAFLKVAGVVLLQLGT 62

Query: 66  ATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVP 125
           AT+LHDAGWLKIL  AYFFGSFLNHNLFLAIHELSHNLAFSTP YNRWLGI ANLP+GVP
Sbjct: 63  ATVLHDAGWLKILTVAYFFGSFLNHNLFLAIHELSHNLAFSTPVYNRWLGIFANLPIGVP 122

Query: 126 MSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKP 185
           MSVTFQKYHLEHHR+QGVDG+DMD+PS  E  +V N + KSIWV FQL FYA RP+FL P
Sbjct: 123 MSVTFQKYHLEHHRYQGVDGMDMDVPSQIEALLVRNALTKSIWVTFQLFFYALRPLFLNP 182

Query: 186 KPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPD 245
           KPPG WEF N  +Q+ALD  +VYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNP+
Sbjct: 183 KPPGVWEFFNLIVQLALDAAMVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPE 242

Query: 246 QETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYM 305
           QETYSYYGPLN LTW VGYHNEHHDFPRIPGNKL++V+E+APEYY+ L SYKSWSQVIYM
Sbjct: 243 QETYSYYGPLNLLTWSVGYHNEHHDFPRIPGNKLYRVKEIAPEYYEDLESYKSWSQVIYM 302

Query: 306 YIMDRTVGPFSRMKRKPSATKKS 328
           YIMD T+GPFSRMKRKPS T K 
Sbjct: 303 YIMDCTIGPFSRMKRKPSTTSKK 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248806|ref|NP_001240199.1| uncharacterized protein LOC100792937 [Glycine max] gi|255644473|gb|ACU22740.1| unknown [Glycine max]

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 265/322 (82%), Positives = 292/322 (90%)

Query: 5   RGEEREEGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLY 64
           RGE+RE   +A  FFWSYTDEPHA+RRRQILS+YPQIK+LFGPD  AF K++ VVLLQL 
Sbjct: 3   RGEDREGVAVAGGFFWSYTDEPHATRRRQILSKYPQIKQLFGPDHSAFFKISGVVLLQLG 62

Query: 65  TATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGV 124
           T  LLHDAGWLKI   AYFFGSFLNHNLFLAIHELSHNLAFSTP YNRWLGI ANLP+GV
Sbjct: 63  TGALLHDAGWLKIFLVAYFFGSFLNHNLFLAIHELSHNLAFSTPVYNRWLGIFANLPIGV 122

Query: 125 PMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLK 184
           PMSVTFQKYHLEHHRFQGVDGIDMD+PSLTE R+V N++AK+IWV  QL FYA RP+FLK
Sbjct: 123 PMSVTFQKYHLEHHRFQGVDGIDMDVPSLTEVRLVKNIIAKTIWVFLQLFFYALRPLFLK 182

Query: 185 PKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNP 244
           PKPPG WEFINFS+QIALD+++VYF+GWK+ AYLILSTFVGGGMHPMAGHFISEHYVFNP
Sbjct: 183 PKPPGIWEFINFSVQIALDVSMVYFFGWKALAYLILSTFVGGGMHPMAGHFISEHYVFNP 242

Query: 245 DQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIY 304
           DQETYSYYGPLN+LTWHVGYHNEHHDFPRIPGNKLHKV+E+APE+Y  LASY+SWSQ+IY
Sbjct: 243 DQETYSYYGPLNYLTWHVGYHNEHHDFPRIPGNKLHKVKEIAPEFYDNLASYRSWSQIIY 302

Query: 305 MYIMDRTVGPFSRMKRKPSATK 326
           MYIMDRTVGPFSRMKRK S  +
Sbjct: 303 MYIMDRTVGPFSRMKRKSSKAE 324

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508932|gb|AFK42532.1| unknown [Lotus japonicus]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 271/314 (86%), Positives = 287/314 (91%)

Query: 13  VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
           VMA DFFWSYTDEPHASRRRQILS+YPQIK+LFGPD  AF K++ VVLLQL TATLL DA
Sbjct: 14  VMAGDFFWSYTDEPHASRRRQILSKYPQIKQLFGPDHSAFFKISGVVLLQLGTATLLQDA 73

Query: 73  GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQK 132
           GWLKIL  AYFFGSFLNHNLFLAIHELSHNLAFSTPA NRWLGI ANLP+GVPMSVTFQK
Sbjct: 74  GWLKILLVAYFFGSFLNHNLFLAIHELSHNLAFSTPALNRWLGIFANLPIGVPMSVTFQK 133

Query: 133 YHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWE 192
           YHLEHHRFQGVDGIDMDIPSL E  +VTNV AK+IWV  QL FYAFRP+FLKPKPPG WE
Sbjct: 134 YHLEHHRFQGVDGIDMDIPSLAEAHVVTNVFAKTIWVFLQLFFYAFRPLFLKPKPPGIWE 193

Query: 193 FINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYY 252
           FINFS+QIALD+ +VYFWGWKS AYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYY
Sbjct: 194 FINFSVQIALDVAMVYFWGWKSLAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYY 253

Query: 253 GPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTV 312
           GPLN +TW+VGYHNEHHDFPRIPGNKLHKV+E+APEYY  LASYKSWSQVIYMY MDRTV
Sbjct: 254 GPLNLVTWYVGYHNEHHDFPRIPGNKLHKVKEIAPEYYDELASYKSWSQVIYMYFMDRTV 313

Query: 313 GPFSRMKRKPSATK 326
           GPFSRMKRKP  T+
Sbjct: 314 GPFSRMKRKPGKTE 327

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15234510|ref|NP_192402.1| sphingolipid delta-4 desaturase [Arabidopsis thaliana] gi|6752878|gb|AAF27915.1|AF220201_1 DES-1-like transmembrane protein [Arabidopsis thaliana] gi|4325341|gb|AAD17340.1| similar to the Drosophila DES-1 protein (GB:X94180) [Arabidopsis thaliana] gi|7267252|emb|CAB81035.1| putative fatty acid desaturase [Arabidopsis thaliana] gi|62320747|dbj|BAD95415.1| putative fatty acid desaturase [Arabidopsis thaliana] gi|332657044|gb|AEE82444.1| sphingolipid delta-4 desaturase [Arabidopsis thaliana]

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 261/319 (81%), Positives = 289/319 (90%)

Query: 7   EEREEGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTA 66
           EE  EGVMA DFFWSYTDEPHASRRRQILS YPQI++LFGPDPWAF K+T+VV+LQL TA
Sbjct: 13  EEEREGVMATDFFWSYTDEPHASRRRQILSCYPQIRQLFGPDPWAFLKITLVVILQLSTA 72

Query: 67  TLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPM 126
            +LH++GWLKIL+ AYFFGSFLNHNLFLAIHELSHNLAFSTP YNR LGI ANLP+GVPM
Sbjct: 73  AILHNSGWLKILSIAYFFGSFLNHNLFLAIHELSHNLAFSTPVYNRCLGIFANLPIGVPM 132

Query: 127 SVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPK 186
           SVTFQKYHLEHHRFQGVDGIDMD+P+ TE  +VTN+ AK+IWV  QL FYA RP+F+KPK
Sbjct: 133 SVTFQKYHLEHHRFQGVDGIDMDVPTYTEAHLVTNIFAKTIWVFLQLFFYALRPIFIKPK 192

Query: 187 PPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQ 246
           PPGYWEFINF IQI LD+++V F+GW+SFAYLILSTFVGGGMHPMAGHFISEHYVFNP+Q
Sbjct: 193 PPGYWEFINFLIQIVLDVSVVLFFGWRSFAYLILSTFVGGGMHPMAGHFISEHYVFNPNQ 252

Query: 247 ETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMY 306
           ETYSYYGPLN LTW VGYHNEHHDFPRIPGNKLH V+E+A EYY+GL SYKSWSQVIYMY
Sbjct: 253 ETYSYYGPLNLLTWSVGYHNEHHDFPRIPGNKLHLVKEIAGEYYEGLESYKSWSQVIYMY 312

Query: 307 IMDRTVGPFSRMKRKPSAT 325
           IMD TVGP+SRMKRK S +
Sbjct: 313 IMDTTVGPYSRMKRKLSKS 331

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446491|ref|XP_003593523.1| Sphingolipid delta(4)-desaturase DES1 [Medicago truncatula] gi|124360608|gb|ABN08607.1| Fatty acid desaturase; Peptidase M, neutral zinc metallopeptidases, zinc-binding site [Medicago truncatula] gi|355482571|gb|AES63774.1| Sphingolipid delta(4)-desaturase DES1 [Medicago truncatula]

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 264/314 (84%), Positives = 288/314 (91%)

Query: 13  VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
           +MA DFFWSYTDEPHASRRRQILS+YP IK+LFGPDP+AF K++VVVLLQL TA LL DA
Sbjct: 15  MMAGDFFWSYTDEPHASRRRQILSKYPHIKQLFGPDPFAFFKISVVVLLQLGTAVLLKDA 74

Query: 73  GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQK 132
           G LKIL  AYFFGSFLNHNLFLAIHELSHNLAFSTP YNRWLGI ANLP+GVPMSVTFQK
Sbjct: 75  GRLKILLVAYFFGSFLNHNLFLAIHELSHNLAFSTPVYNRWLGIFANLPIGVPMSVTFQK 134

Query: 133 YHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWE 192
           YHLEHHRFQGVDG+DMDIPS  E  +VTNV+AK+IWV  QL FYAFRP+FLKPKPPG WE
Sbjct: 135 YHLEHHRFQGVDGVDMDIPSHMEAHVVTNVLAKTIWVFLQLFFYAFRPLFLKPKPPGIWE 194

Query: 193 FINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYY 252
           FINFS+QIALD+++VYFWGWKS AYLIL+TFVGGGMHPMAGHFISEHYVFNP+QETYSYY
Sbjct: 195 FINFSVQIALDVSMVYFWGWKSLAYLILATFVGGGMHPMAGHFISEHYVFNPEQETYSYY 254

Query: 253 GPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTV 312
           GPLN LTWHVGYHNEHHDFPRIPGNKLHKV+E+APEYY  L+ YKSWSQVIYMYI DRT+
Sbjct: 255 GPLNLLTWHVGYHNEHHDFPRIPGNKLHKVKEIAPEYYDSLSHYKSWSQVIYMYITDRTI 314

Query: 313 GPFSRMKRKPSATK 326
           GP+SRMKRKPS T+
Sbjct: 315 GPYSRMKRKPSKTE 328

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507808|gb|AFK41970.1| unknown [Medicago truncatula]

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 264/314 (84%), Positives = 289/314 (92%)

Query: 13  VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
           +MA DFFWSYTDEPHASRRRQILS+YP IK+LFGPDP+AF K++VVVLLQL TA LL DA
Sbjct: 15  MMAGDFFWSYTDEPHASRRRQILSKYPHIKQLFGPDPFAFFKISVVVLLQLGTAVLLKDA 74

Query: 73  GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQK 132
           G LKIL  AYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGI ANLP+GVPMSVTFQK
Sbjct: 75  GRLKILLVAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGIFANLPIGVPMSVTFQK 134

Query: 133 YHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWE 192
           +HLEHHRFQGVDG+DMDIPS  E  +VTNV+AK+IWV  QL FYAFRP+FLKPKPPG WE
Sbjct: 135 HHLEHHRFQGVDGVDMDIPSHMEAHVVTNVLAKTIWVFLQLFFYAFRPLFLKPKPPGIWE 194

Query: 193 FINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYY 252
           FINFS+QIALD+++VYFWGWKS AYLIL+TFVGGGMHPMAGHFISEHYVFNP+QETYSYY
Sbjct: 195 FINFSVQIALDVSMVYFWGWKSLAYLILATFVGGGMHPMAGHFISEHYVFNPEQETYSYY 254

Query: 253 GPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTV 312
           GPLN LTWHVGYHNEHHDFPRIPGNKLHKV+E+APEYY  L+ YKSWSQVIYMYI DRT+
Sbjct: 255 GPLNLLTWHVGYHNEHHDFPRIPGNKLHKVKEIAPEYYDSLSHYKSWSQVIYMYITDRTI 314

Query: 313 GPFSRMKRKPSATK 326
           GP+SRMKRKPS T+
Sbjct: 315 GPYSRMKRKPSKTE 328

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350534880|ref|NP_001234676.1| uncharacterized protein LOC543709 [Solanum lycopersicum] gi|20147520|gb|AAM12534.1|AF466378_1 putative sphingolipid delta 4 desaturase DES-1 [Solanum lycopersicum]

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 268/317 (84%), Positives = 288/317 (90%), Gaps = 1/317 (0%)

Query: 14  MAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAG 73
           MA DFFWSYTDEPHASRRRQILSQYPQIK+LFGPDP+AF K++ VVLLQL+TAT LHDA 
Sbjct: 16  MANDFFWSYTDEPHASRRRQILSQYPQIKQLFGPDPFAFLKISGVVLLQLWTATFLHDAT 75

Query: 74  WLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKY 133
           WLKIL  AYFFGSFLNHNLFLAIHELSHNLAFSTP YNRWLGI ANLPVGVPMSVTFQKY
Sbjct: 76  WLKILIVAYFFGSFLNHNLFLAIHELSHNLAFSTPTYNRWLGIFANLPVGVPMSVTFQKY 135

Query: 134 HLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEF 193
           HLEHHRFQGVDGIDMDIPS TE  +V NV+AKSIWVI QL FYAFRP+FLKPKPPG WEF
Sbjct: 136 HLEHHRFQGVDGIDMDIPSQTEAHVVKNVLAKSIWVILQLFFYAFRPLFLKPKPPGLWEF 195

Query: 194 INFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYG 253
           INF+IQ++LD  +VYFWGWKS AYLILSTFVGGGMHPMAGHFISEHYVF P+QETYSYYG
Sbjct: 196 INFTIQLSLDGAMVYFWGWKSLAYLILSTFVGGGMHPMAGHFISEHYVFKPEQETYSYYG 255

Query: 254 PLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVG 313
           PLN +TW VGYHNEHHDFPRIPG+KL+KV+E+APEYY+ L +YKSWSQVIYMYIMDRTVG
Sbjct: 256 PLNLMTWSVGYHNEHHDFPRIPGSKLYKVKEIAPEYYENLDAYKSWSQVIYMYIMDRTVG 315

Query: 314 PFSRMKRKPSA-TKKSE 329
           PFSRMKRK S    KSE
Sbjct: 316 PFSRMKRKLSTKANKSE 332

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
TAIR|locus:2135388	332	DES-1-LIKE [Arabidopsis thalia	0.945	0.936	0.826	4.8e-149
FB|FBgn0001941	321	ifc "infertile crescent" [Dros	0.936	0.959	0.522	1.5e-92
UNIPROTKB|O15121	323	DEGS1 "Sphingolipid delta(4)-d	0.936	0.953	0.519	1.2e-90
UNIPROTKB|I3LKA2	323	DEGS1 "Uncharacterized protein	0.936	0.953	0.529	1.2e-90
UNIPROTKB|Q3ZBY7	323	DEGS1 "Sphingolipid delta(4)-d	0.936	0.953	0.532	1.1e-89
RGD|70917	323	Degs1 "delta(4)-desaturase, sp	0.963	0.981	0.498	1.1e-89
MGI|MGI:1097711	323	Degs1 "degenerative spermatocy	0.954	0.972	0.503	2.5e-88
ZFIN|ZDB-GENE-030131-5283	350	degs1 "degenerative spermatocy	0.939	0.882	0.488	2e-86
UNIPROTKB|Q5F3C1	323	DEGS1 "Sphingolipid delta(4)-d	0.963	0.981	0.485	3e-85
ZFIN|ZDB-GENE-080228-1	322	degs2 "degenerative spermatocy	0.945	0.965	0.472	1e-84

TAIR|locus:2135388 DES-1-LIKE [Arabidopsis thaliana (taxid:3702)]

 Score = 1455 (517.2 bits), Expect = 4.8e-149, P = 4.8e-149
 Identities = 257/311 (82%), Positives = 284/311 (91%)

Query:    13 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
             VMA DFFWSYTDEPHASRRRQILS YPQI++LFGPDPWAF K+T+VV+LQL TA +LH++
Sbjct:    19 VMATDFFWSYTDEPHASRRRQILSCYPQIRQLFGPDPWAFLKITLVVILQLSTAAILHNS 78

Query:    73 GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQK 132
             GWLKIL+ AYFFGSFLNHNLFLAIHELSHNLAFSTP YNR LGI ANLP+GVPMSVTFQK
Sbjct:    79 GWLKILSIAYFFGSFLNHNLFLAIHELSHNLAFSTPVYNRCLGIFANLPIGVPMSVTFQK 138

Query:   133 YHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWE 192
             YHLEHHRFQGVDGIDMD+P+ TE  +VTN+ AK+IWV  QL FYA RP+F+KPKPPGYWE
Sbjct:   139 YHLEHHRFQGVDGIDMDVPTYTEAHLVTNIFAKTIWVFLQLFFYALRPIFIKPKPPGYWE 198

Query:   193 FINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYY 252
             FINF IQI LD+++V F+GW+SFAYLILSTFVGGGMHPMAGHFISEHYVFNP+QETYSYY
Sbjct:   199 FINFLIQIVLDVSVVLFFGWRSFAYLILSTFVGGGMHPMAGHFISEHYVFNPNQETYSYY 258

Query:   253 GPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTV 312
             GPLN LTW VGYHNEHHDFPRIPGNKLH V+E+A EYY+GL SYKSWSQVIYMYIMD TV
Sbjct:   259 GPLNLLTWSVGYHNEHHDFPRIPGNKLHLVKEIAGEYYEGLESYKSWSQVIYMYIMDTTV 318

Query:   313 GPFSRMKRKPS 323
             GP+SRMKRK S
Sbjct:   319 GPYSRMKRKLS 329

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IMP

GO:0042284 "sphingolipid delta-4 desaturase activity" evidence=IGI;IMP

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

FB|FBgn0001941 ifc "infertile crescent" [Drosophila melanogaster (taxid:7227)]

 Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
 Identities = 163/312 (52%), Positives = 222/312 (71%)

Query:    13 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVT-VVVLLQLYTATLLHD 71
             V   DF W YT+EPHASRR+ IL +YPQIK+LFG DP  F  V   +VL Q+    ++ D
Sbjct:     5 VSRTDFEWVYTEEPHASRRKIILEKYPQIKKLFGHDP-NFKWVAGAMVLTQILALFVVKD 63

Query:    72 AGWLKILATAYFFGSFLNHNLFLAIHELSHNLAF--STPAYNRWLGILANLPVGVPMSVT 129
               W  ++  AY FG  +NH+L LA+HE+SHNLAF  S P +NR LG + NLP+G+PMS++
Sbjct:    64 LSWSWLIVAAYCFGGIINHSLMLAVHEISHNLAFGHSRPMHNRILGFICNLPIGLPMSIS 123

Query:   130 FQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPG 189
             F+KYHLEHHR+QG + ID DIP+L E R+      K +WV  Q  FY FRP+ + PKPP 
Sbjct:   124 FKKYHLEHHRYQGDEAIDTDIPTLLEARLFDTTFGKFLWVCLQPFFYIFRPLIINPKPPT 183

Query:   190 YWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETY 249
               E IN  +Q+  +  IVYF GWK  AYL++ + +  G+HP+AGHFISEHY+F    ETY
Sbjct:   184 RLEIINTVVQLTFNALIVYFLGWKPLAYLLIGSILAMGLHPVAGHFISEHYMFAKGFETY 243

Query:   250 SYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMD 309
             SYYGPLN++T++VGYHNEHHDFP +PG++L +V+ +A E+Y  +  + SW++V+Y +IMD
Sbjct:   244 SYYGPLNWITFNVGYHNEHHDFPAVPGSRLPEVKRIAKEFYDTMPQHTSWTRVLYDFIMD 303

Query:   310 RTVGPFSRMKRK 321
               VGP++R+KR+
Sbjct:   304 PAVGPYARVKRR 315

GO:0007283 "spermatogenesis" evidence=IMP;TAS

GO:0005886 "plasma membrane" evidence=ISS;NAS

GO:0007053 "spindle assembly involved in male meiosis" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA;TAS

GO:0016006 "Nebenkern" evidence=IDA

GO:0070938 "contractile ring" evidence=IDA

GO:0004768 "stearoyl-CoA 9-desaturase activity" evidence=ISS

GO:0042284 "sphingolipid delta-4 desaturase activity" evidence=IDA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|O15121 DEGS1 "Sphingolipid delta(4)-desaturase DES1" [Homo sapiens (taxid:9606)]

 Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
 Identities = 161/310 (51%), Positives = 215/310 (69%)

Query:    13 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
             V   DF W YTD+PHA RRR+IL++YP+IK L  PDP     + ++VL QL    ++ D 
Sbjct:     5 VSREDFEWVYTDQPHADRRREILAKYPEIKSLMKPDPNLIWIIIMMVLTQLGAFYIVKDL 64

Query:    73 GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSVTF 130
              W  ++  AY FGS +NH++ LAIHE++HN AF      +NRW G+ ANLP+G+P S++F
Sbjct:    65 DWKWVIFGAYAFGSCINHSMTLAIHEIAHNAAFGNCKAMWNRWFGMFANLPIGIPYSISF 124

Query:   131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
             ++YH++HHR+ G DG+D+DIP+  E         K IWVI Q LFYAFRP+F+ PKP  Y
Sbjct:   125 KRYHMDHHRYLGADGVDVDIPTDFEGWFFCTAFRKFIWVILQPLFYAFRPLFINPKPITY 184

Query:   191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
              E IN   Q+  DI I YF G KS  Y++ ++ +G G+HP++GHFI+EHY+F    ETYS
Sbjct:   185 LEVINTVAQVTFDILIYYFLGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYS 244

Query:   251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
             YYGPLN LT++VGYHNEHHDFP IPG  L  VR++A EYY  L  Y SW +V+Y ++MD 
Sbjct:   245 YYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDFVMDD 304

Query:   311 TVGPFSRMKR 320
             T+ P+SRMKR
Sbjct:   305 TISPYSRMKR 314

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0016020 "membrane" evidence=TAS

GO:0005783 "endoplasmic reticulum" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006665 "sphingolipid metabolic process" evidence=TAS

GO:0030148 "sphingolipid biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|I3LKA2 DEGS1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
 Identities = 164/310 (52%), Positives = 215/310 (69%)

Query:    13 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
             V   DF W YTD+PHASRR++IL++YP+IK L  PD      V ++VL QL    L+ D 
Sbjct:     5 VAREDFEWVYTDQPHASRRQEILAKYPEIKSLMKPDSNLIWIVILMVLSQLIAFYLVKDL 64

Query:    73 GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTF 130
              W  ++  AY FGS +NH++ LAIHE+SHN AF    P +NRW G+ ANLP+GVP SV+F
Sbjct:    65 DWKWVIFWAYAFGSCINHSMTLAIHEVSHNSAFGHCKPMWNRWFGVFANLPIGVPYSVSF 124

Query:   131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
             ++YH++HHR+ G DGID+DIP+  E         K +WVI Q LFYAFRP+F+ PKP  Y
Sbjct:   125 KRYHMDHHRYLGSDGIDVDIPTDFEGWFFCTTFRKFMWVILQPLFYAFRPLFINPKPISY 184

Query:   191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
              E IN  IQ+  D+ I Y  G KS  Y++ ++ +G G+HP++GHFI+EHY+F    ETYS
Sbjct:   185 LEIINTVIQVTFDVVIYYVLGMKSLVYMLSASLLGLGLHPISGHFIAEHYMFLKGHETYS 244

Query:   251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
             YYGPLN LT++VGYHNEHHDFP IPG  L  VR++A EYY  L  Y SW +V+Y ++ D 
Sbjct:   245 YYGPLNLLTFNVGYHNEHHDFPNIPGKNLPLVRKIAAEYYDNLPHYNSWIKVLYDFVTDD 304

Query:   311 TVGPFSRMKR 320
             T+ P+SRMKR
Sbjct:   305 TISPYSRMKR 314

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

UNIPROTKB|Q3ZBY7 DEGS1 "Sphingolipid delta(4)-desaturase DES1" [Bos taurus (taxid:9913)]

 Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
 Identities = 165/310 (53%), Positives = 212/310 (68%)

Query:    13 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
             V   DF W YTD+PHA+RR++IL++YP+IK L  PD      V ++VL Q     L+ D 
Sbjct:     5 VSREDFEWVYTDQPHATRRQEILAKYPEIKSLMKPDSNLIWIVIMMVLTQFVAFYLVKDL 64

Query:    73 GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTF 130
              W  +L  AY FGS +NH++ LAIHE+SHN AF      +NRW GI ANLP+GVP SV+F
Sbjct:    65 DWKWVLFWAYAFGSCVNHSMTLAIHEVSHNSAFGHYKAMWNRWFGIFANLPIGVPYSVSF 124

Query:   131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
             ++YH++HHR+ G DGID+DIP+  E         K IWVI Q LFYAFRP+F+ PKP  Y
Sbjct:   125 KRYHMDHHRYLGADGIDVDIPTDFEGWFFCTTFRKFIWVILQPLFYAFRPLFINPKPISY 184

Query:   191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
              E IN  IQI  DI + Y  G KS  Y++ ++  G G+HP++GHFI+EHY+F    ETYS
Sbjct:   185 LEIINTVIQITFDIVVYYVLGVKSLVYMLAASLFGLGLHPISGHFIAEHYMFLKGHETYS 244

Query:   251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
             YYGPLN LT++VGYHNEHHDFP IPG  L  VR++A EYY  L  Y SW +V+Y ++ D 
Sbjct:   245 YYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDFVTDD 304

Query:   311 TVGPFSRMKR 320
             T+ P+SRMKR
Sbjct:   305 TISPYSRMKR 314

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

RGD|70917 Degs1 "delta(4)-desaturase, sphingolipid 1" [Rattus norvegicus (taxid:10116)]

 Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
 Identities = 159/319 (49%), Positives = 221/319 (69%)

Query:    13 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
             V   +F W YTD+PHA+RR++IL++YP+IK L  PDP     VT ++L+QL +  L+ D 
Sbjct:     5 VSREEFEWVYTDQPHAARRQEILAKYPEIKSLMKPDPNLIWIVTSMLLVQLASFYLVKDL 64

Query:    73 GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTF 130
              W  ++  +Y FGS LNH++ LAIHE+SHN  F      +NRW G+ ANL +GVP S++F
Sbjct:    65 DWKWLMFWSYAFGSCLNHSMTLAIHEISHNFPFGHHKAMWNRWFGMFANLSLGVPYSISF 124

Query:   131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
             ++YH++HHR+ G DGID+DIP+  E       + K +WVI Q LFYAFRP+F+ PKP  +
Sbjct:   125 KRYHMDHHRYLGADGIDVDIPTDFEGWFFCTTLRKLVWVILQPLFYAFRPLFINPKPITH 184

Query:   191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
              E IN  IQ+  D+ + Y +G KS  Y++ ++ +G G+HP++GHFI+EHY+F    ETYS
Sbjct:   185 LEVINTVIQVTFDVLVYYVFGVKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGHETYS 244

Query:   251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
             YYGPLN LT++VGYHNEHHDFP +PG  L  VR++A EYY  L  Y SW +V+Y ++MD 
Sbjct:   245 YYGPLNLLTFNVGYHNEHHDFPNVPGKNLPLVRKIASEYYDNLPHYNSWIRVLYDFVMDD 304

Query:   311 TVGPFSRMKRKPSATKKSE 329
             T+ P+SRMKR P   +  E
Sbjct:   305 TISPYSRMKRPPKGNEIQE 323

GO:0005739 "mitochondrion" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

MGI|MGI:1097711 Degs1 "degenerative spermatocyte homolog 1 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
 Identities = 159/316 (50%), Positives = 216/316 (68%)

Query:    13 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
             V   +F W YTD+PHA+RR++IL++YP+IK L  PD      V +++L+QL +  L+ D 
Sbjct:     5 VSREEFEWVYTDQPHAARRKEILAKYPEIKSLMKPDHNLIWIVAMMLLVQLASFYLVKDL 64

Query:    73 GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFS--TPAYNRWLGILANLPVGVPMSVTF 130
              W  ++  +Y FGS LNH++ LAIHE+SHN  F      +NRW G+ ANL +GVP S++F
Sbjct:    65 DWKWVIFWSYVFGSCLNHSMTLAIHEISHNFPFGHHKALWNRWFGMFANLSLGVPYSISF 124

Query:   131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
             ++YH++HHR+ G D ID+DIP+  E         K +WVI Q LFYAFRP+F+ PKP  Y
Sbjct:   125 KRYHMDHHRYLGADKIDVDIPTDFEGWFFCTTFRKFVWVILQPLFYAFRPLFINPKPITY 184

Query:   191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
              E IN  IQI  DI I Y +G KS  Y++ +T +G G+HP++GHFI+EHY+F    ETYS
Sbjct:   185 LEIINTVIQITFDIIIYYVFGVKSLVYMLAATLLGLGLHPISGHFIAEHYMFLKGHETYS 244

Query:   251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
             YYGPLN LT++VGYHNEHHDFP +PG  L  VR++A EYY  L  Y SW +V+Y ++ D 
Sbjct:   245 YYGPLNLLTFNVGYHNEHHDFPNVPGKNLPMVRKIASEYYDDLPHYNSWIKVLYDFVTDD 304

Query:   311 TVGPFSRMKRKPSATK 326
             T+ P+SRMKR P   +
Sbjct:   305 TISPYSRMKRPPKGNE 320

GO:0005739 "mitochondrion" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

ZFIN|ZDB-GENE-030131-5283 degs1 "degenerative spermatocyte homolog 1, lipid desaturase (Drosophila)" [Danio rerio (taxid:7955)]

 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 152/311 (48%), Positives = 214/311 (68%)

Query:    13 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
             V   DF W YTD+PHA RR++IL++YP+IK L GPDP     V+ +V++Q     L+ D 
Sbjct:     5 VAREDFEWVYTDQPHADRRKEILAKYPEIKSLMGPDPRLKWIVSTMVVVQFLAFYLVKDL 64

Query:    73 GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSVTF 130
              W  +    Y FGS +NH++ LAIHE+SHN AF      +NRW  I ANLP+G+P S +F
Sbjct:    65 SWKWVFFWTYAFGSCINHSMTLAIHEISHNTAFGNNRAKWNRWFAIFANLPIGLPYSASF 124

Query:   131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
             ++YHL+HHR+ G DG+D+DIP+  E       + K IW++FQ LFYA RP+++ PKP   
Sbjct:   125 KRYHLDHHRYLGGDGVDVDIPTDFEGWFFCTRMRKLIWIMFQPLFYAIRPLYINPKPISQ 184

Query:   191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
              E +N +IQ++ +  + + WG K   Y+++ + +G G+HP++GHFI+EHY+F    ETYS
Sbjct:   185 LELLNVAIQLSFNALLYWSWGAKPVVYMMMGSMLGMGLHPISGHFIAEHYMFLKGHETYS 244

Query:   251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
             YYG LN LT++VGYHNEHHDFP IPG +L  V+E+A EYY+ L  Y SW +V+Y +IMD 
Sbjct:   245 YYGSLNLLTFNVGYHNEHHDFPSIPGRRLPMVKEIASEYYRDLPCYSSWIKVLYDFIMDD 304

Query:   311 TVGPFSRMKRK 321
              + P+SR+KRK
Sbjct:   305 QLSPYSRVKRK 315

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

UNIPROTKB|Q5F3C1 DEGS1 "Sphingolipid delta(4)-desaturase DES1" [Gallus gallus (taxid:9031)]

 Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
 Identities = 155/319 (48%), Positives = 211/319 (66%)

Query:    13 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDA 72
             V   DF W YTD+PHA RR++IL+++P+IK L  PD      V ++V  QL    L+ D 
Sbjct:     5 VAREDFEWVYTDQPHADRRKEILAKHPEIKALMKPDYNLIWVVMLMVAAQLTAFYLVRDL 64

Query:    73 GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSVTF 130
              W  ++  AY FGS ++H++ LAIHE+SHN AF      +NRW GI ANLP+G+P S++F
Sbjct:    65 DWKWVVFWAYVFGSCISHSMTLAIHEISHNSAFGNGRAMWNRWFGIFANLPLGLPYSISF 124

Query:   131 QKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGY 190
             ++YH++HHR+ G DGID+DIP+  E         K IW++ Q  FYA RP+ + PKP   
Sbjct:   125 KRYHMDHHRYLGGDGIDVDIPTNFEGWFFCTRFRKFIWIVLQPFFYAIRPLCINPKPITR 184

Query:   191 WEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYS 250
              E IN   Q+  DI I Y WG KS  Y++  + +G G+HP++GHFI+EHY+F    ETYS
Sbjct:   185 LEIINLLAQLFFDIVIYYLWGAKSIFYMLAGSVLGLGLHPISGHFIAEHYMFLKGHETYS 244

Query:   251 YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDR 310
             YYGPLN LT++VGYHNEHHDFP IPG  L  V+++A EYY  L  Y SW +V+Y ++MD 
Sbjct:   245 YYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVKKIAAEYYDNLPQYNSWIKVLYDFVMDD 304

Query:   311 TVGPFSRMKRKPSATKKSE 329
             T+ P+SRMKR+     K +
Sbjct:   305 TISPYSRMKRQLKGEVKQD 323

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=TAS

GO:0006665 "sphingolipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

ZFIN|ZDB-GENE-080228-1 degs2 "degenerative spermatocyte homolog 2, lipid desaturase (Drosophila)" [Danio rerio (taxid:7955)]

 Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
 Identities = 148/313 (47%), Positives = 213/313 (68%)

Query:    17 DFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLK 76
             DF W Y ++PH  RR++IL++YP+IK L G DP     V+ +VL QL    ++H+  W  
Sbjct:     9 DFEWVYNEQPHTWRRKEILAKYPEIKSLMGHDPQLKWVVSGMVLTQLLACYMVHELSWKW 68

Query:    77 ILATAYFFGSFLNHNLFLAIHELSHNLAFSTPA--YNRWLGILANLPVGVPMSVTFQKYH 134
             +L  AY FG  +NH+L LAIH++SHN+AF T    +NRW  + ANLP+G+P S +F+KYH
Sbjct:    69 VLFWAYAFGGCINHSLTLAIHDISHNVAFGTKRARWNRWFAMFANLPIGLPYSASFKKYH 128

Query:   135 LEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFI 194
             ++HHR+ G DG+D+DIP+  E         K +W+  Q LFYA RP+ + PKP    E +
Sbjct:   129 IDHHRYLGGDGLDVDIPTDLEGWFFCTPARKVLWLFLQPLFYALRPLIVNPKPVTRLEML 188

Query:   195 NFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETYSYYGP 254
             N ++Q  +DI I YFWG K   YLI  + +  G+HP++GHFI+EHY+F    ETYSYYGP
Sbjct:   189 NAAVQFVVDIIIYYFWGLKPIVYLISGSILCMGLHPISGHFIAEHYMFTKGHETYSYYGP 248

Query:   255 LNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGP 314
             LN +T++VGYH EHHDFP IPG+KL +V+ +A EYY  L  + SW +V++ ++ D ++GP
Sbjct:   249 LNLITFNVGYHMEHHDFPSIPGSKLPEVKRIAAEYYDSLPQHTSWMRVLWDFVFDDSIGP 308

Query:   315 FSRMKRKPSATKK 327
             ++R+KR+ +  KK
Sbjct:   309 YARIKRQYTLGKK 321

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
G5EC63	DEGS2_CAEEL	1, ., 1, 4, ., -, ., -	0.4670	0.9635	0.8756	yes	no
O59715	DEGS_SCHPO	1, ., 1, 4, ., -, ., -	0.4593	0.9240	0.8397	yes	no
Q3ZBY7	DEGS1_BOVIN	1, ., 1, 4, ., -, ., -	0.5203	0.9635	0.9814	yes	no
O09005	DEGS1_MOUSE	1, ., 1, 4, ., -, ., -	0.5015	0.9635	0.9814	yes	no
Q6UQ04	DEGS1_MICFO	1, ., 1, 4, ., -, ., -	0.5078	0.9635	0.9814	N/A	no
Q5RE51	DEGS1_PONAB	1, ., 1, 4, ., -, ., -	0.5193	0.9361	0.9535	yes	no
Q5XIF5	DEGS1_RAT	1, ., 1, 4, ., -, ., -	0.4984	0.9635	0.9814	yes	no
O15121	DEGS1_HUMAN	1, ., 1, 4, ., -, ., -	0.5193	0.9361	0.9535	yes	no
Q5F3C1	DEGS1_CHICK	1, ., 1, 4, ., -, ., -	0.4858	0.9635	0.9814	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.14.15	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.01240027	SubName- Full=Putative uncharacterized protein; (332 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pm.C_1660029	hypothetical protein (256 aa)						•			0.902
	gw1.3952.2.1	annotation not avaliable (252 aa)						•			0.902
	eugene3.00110197	hypothetical protein (256 aa)						•			0.902
	eugene3.00161045	hypothetical protein (786 aa)						•	•		0.902
	fgenesh4_pg.C_LG_I002447	hypothetical protein (254 aa)						•			0.900
	estExt_fgenesh4_pm.C_LG_V0449	hypothetical protein (257 aa)						•			0.899
	estExt_fgenesh4_pg.C_LG_II0572	SubName- Full=Putative uncharacterized protein; (257 aa)						•			0.899
	estExt_fgenesh4_pg.C_860134	diacylglycerol kinase (627 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	329
PLN02579	323	PLN02579, PLN02579, sphingolipid delta-4 desaturas	0.0
cd03508	289	cd03508, Delta4-sphingolipid-FADS-like, The Delta4	1e-171
pfam00487	251	pfam00487, FA_desaturase, Fatty acid desaturase	3e-18
pfam08557	39	pfam08557, Lipid_DES, Sphingolipid Delta4-desatura	8e-18
COG3239	343	COG3239, DesA, Fatty acid desaturase [Lipid metabo	1e-16
cd01060	122	cd01060, Membrane-FADS-like, The membrane fatty ac	2e-09
cd03506	204	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid D	1e-07
cd03511	285	cd03511, Rhizopine-oxygenase-like, This CD include	6e-06
cd03507	222	cd03507, Delta12-FADS-like, The Delta12 Fatty Acid	1e-04
cd03510	175	cd03510, Rhizobitoxine-FADS-like, This CD includes	0.001
cd01060	122	cd01060, Membrane-FADS-like, The membrane fatty ac	0.004

>gnl|CDD|215316 PLN02579, PLN02579, sphingolipid delta-4 desaturase

 Score =  633 bits (1635), Expect = 0.0
 Identities = 262/324 (80%), Positives = 282/324 (87%), Gaps = 2/324 (0%)

Query: 6   GEEREEGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYT 65
            EE EEGVMA DFFWSYTDEPHASRRR+ILS+YPQIKELFGPDPWAFPK+  VVLLQL T
Sbjct: 2   SEEEEEGVMATDFFWSYTDEPHASRRREILSKYPQIKELFGPDPWAFPKIAAVVLLQLCT 61

Query: 66  ATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVP 125
           ATLLHDAGW KIL  AYFFG FLNHNLFLAIHELSHNLAF TP YNRWLGI ANLP+G+P
Sbjct: 62  ATLLHDAGWPKILLVAYFFGGFLNHNLFLAIHELSHNLAFKTPVYNRWLGIFANLPIGIP 121

Query: 126 MSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKP 185
           MSVTFQKYHLEHHRFQGVDGIDMDIPS  E R+V N ++K +WV  QL FYA RP+F+ P
Sbjct: 122 MSVTFQKYHLEHHRFQGVDGIDMDIPSQGEARLVRNTLSKIVWVFLQLFFYALRPLFVNP 181

Query: 186 KPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPD 245
           KPPG WEFIN   QIA D  +VYF GWKS AYLILSTF+GGG+HPMAGHFISEHYVFNP 
Sbjct: 182 KPPGLWEFINLLTQIAFDAALVYFAGWKSLAYLILSTFLGGGLHPMAGHFISEHYVFNPG 241

Query: 246 QETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYM 305
           QETYSYYGPLN LTW+VGYHNEHHDFPRIPG+KLHKV+E+APEYY  L SYKSWSQVIYM
Sbjct: 242 QETYSYYGPLNLLTWNVGYHNEHHDFPRIPGSKLHKVKEIAPEYYDNLKSYKSWSQVIYM 301

Query: 306 YIMDRTVGPFSRMKRKPSATKKSE 329
           YIMD T+GPFSRMKRKP   KKS+
Sbjct: 302 YIMDPTIGPFSRMKRKPP--KKSD 323

Length = 323

>gnl|CDD|239585 cd03508, Delta4-sphingolipid-FADS-like, The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase (MLD), reported to modulate biosynthesis of the epidermal growth factor receptor; and other related proteins

 Score =  477 bits (1230), Expect = e-171
 Identities = 177/289 (61%), Positives = 222/289 (76%), Gaps = 1/289 (0%)

Query: 34  ILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLF 93
           IL++YP+IK+LFGPDP     V  VVLLQ+ TA LL D+ W KIL  AYFFG  +NH+LF
Sbjct: 1   ILAKYPEIKKLFGPDPLTKWVVLGVVLLQIITAYLLRDSSWWKILLVAYFFGGTINHSLF 60

Query: 94  LAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSL 153
           LAIHE+SHNLAF  P +NR  GI ANLP+GVP S++F+KYHLEHHR+ G DG+D DIP+ 
Sbjct: 61  LAIHEISHNLAFGKPLWNRLFGIFANLPIGVPYSISFKKYHLEHHRYLGEDGLDTDIPTE 120

Query: 154 TETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWK 213
            E ++ + V+ K+IWV  Q  FYA RP+F++PKPP   E IN  +QI  D  I YF+GWK
Sbjct: 121 FEGKLFSTVLGKAIWVTLQPFFYALRPLFVRPKPPTRLEVINIVVQITFDYLIYYFFGWK 180

Query: 214 SFAYLILSTFVGGGMHPMAGHFISEHYVFN-PDQETYSYYGPLNFLTWHVGYHNEHHDFP 272
           S AYL+L +F+GGG+HP+AGHFISEHYVF    QETYSYYGPLN LT++VGYHNEHHDFP
Sbjct: 181 SLAYLLLGSFLGGGLHPLAGHFISEHYVFTGKGQETYSYYGPLNLLTFNVGYHNEHHDFP 240

Query: 273 RIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRK 321
            IPG +L K+R++APE+Y  L  + SW +V+Y +IMD  VGP+SR+KRK
Sbjct: 241 YIPGTRLPKLRKIAPEFYDNLPQHTSWPRVLYDFIMDDNVGPYSRVKRK 289

These proteins are found in various eukaryotes including vertebrates, higher plants, and fungi. Studies show that MLD is localized to the endoplasmic reticulum. As with other members of this superfamily, this domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homolog, stearoyl CoA desaturase. Length = 289

>gnl|CDD|215943 pfam00487, FA_desaturase, Fatty acid desaturase

 Score = 82.3 bits (203), Expect = 3e-18
 Identities = 46/240 (19%), Positives = 83/240 (34%), Gaps = 24/240 (10%)

Query: 74  WLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKY 133
              +L  A      L   L    HE +H   F +   N  LG L  L +G+  S  ++  
Sbjct: 2   SWLLLLLALLLAGLLLGILGGLAHEAAHGALFRSRRLNDLLGRLLALLLGISYS-AWRIS 60

Query: 134 HLEHHRFQGVDGIDMDIPSLTETRMVTN-------------VVAKSIWVIFQLLFYAFRP 180
           HL HH      G D D       R                 ++   + ++  L  +  R 
Sbjct: 61  HLRHHHHTNNPGKDPDSARRRLLRYALRRRLLGLGRLLYRFLLGVLLGLLVFLFRFRRRR 120

Query: 181 VFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFI---- 236
           +  + +       +  ++ +AL + +    GW +    +L   +   +  +  +      
Sbjct: 121 LRKRRRRFRIRLLLLLALLLALALLLAGLGGWGALLLFLLPLLLALTLLLLVNYLEHYGL 180

Query: 237 ------SEHYVFNPDQETYSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYY 290
                 +    +     T S    LN+LT ++ YH EHH FP +P  +L ++     E  
Sbjct: 181 DTEPERAARTWYERQLVTTSNSWVLNWLTGNLNYHIEHHLFPGVPWYRLPELHRRLREEL 240

Length = 251

>gnl|CDD|117132 pfam08557, Lipid_DES, Sphingolipid Delta4-desaturase (DES)

 Score = 75.4 bits (186), Expect = 8e-18
 Identities = 24/38 (63%), Positives = 33/38 (86%)

Query: 13 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPW 50
          V+  DF+W+YT+EPHASRR++IL +YP+IK+L GPDP 
Sbjct: 1  VVRDDFYWTYTEEPHASRRKEILKKYPEIKKLMGPDPL 38

Sphingolipids are important membrane signalling molecules involved in many different cellular functions in eukaryotes. Sphingolipid delta 4-desaturase catalyzes the formation of (E)-sphing-4-enine. Some proteins in this family have bifunctional delta 4-desaturase/C-4-hydroxylase activity. Delta 4-desaturated sphingolipids may play a role in early signalling required for entry into meiotic and spermatid differentiation pathways during Drosophila spermatogenesis. This small domain associates with FA_desaturase pfam00487 and appears to be specific to sphingolipid delta 4-desaturase. Length = 39

>gnl|CDD|225779 COG3239, DesA, Fatty acid desaturase [Lipid metabolism]

 Score = 79.4 bits (196), Expect = 1e-16
 Identities = 56/297 (18%), Positives = 89/297 (29%), Gaps = 29/297 (9%)

Query: 40  QIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLK--ILATAYFFGSFLNHNLFLAIH 97
             K     D  A   +T + L  L+    L  A W    +L  A      L   LF   H
Sbjct: 25  LPKPRTRRDAIAIL-ITFLALAGLWALLALSLAYWPSWWLLPLALLLAGLLLTGLFSVGH 83

Query: 98  ELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIP---SLT 154
           +  H   F     N  +G LA   +  P  V ++  H +HH    +   D +        
Sbjct: 84  DCGHGSFFKNRWINDLIGHLAAALLLAP-PVFWRISHNQHHAHTNILDDDPETYVSYPEQ 142

Query: 155 ETRMVTNVVAKSIWVIFQLLFYAFRPVFLKP-----KPPGYWEFIN----FSIQIALDIT 205
             R         +  +       +  +  +      K  G              I L   
Sbjct: 143 LRRGPLRFQLIRLPWLAFGFGPRWALLHFELLEKLFKRSGKAPKAAALATLLAAIGLAAL 202

Query: 206 IVYFWGWKSFAYLILST---FVGGGMH-----PMAGHFISEHYVFNPDQETYSYYGP--L 255
           +   + W     L++      V    H     P  G      +         +   P  L
Sbjct: 203 LALAFFWGLIPLLLVGLWLVLVLFVHHTFDLLPHHGL-EDWQWSDRALNARSNVDAPPLL 261

Query: 256 NFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPE--YYQGLASYKSWSQVIYMYIMDR 310
            FLT ++ YH EHH FP +P  +L +   +  E    +GL  Y  + +     +   
Sbjct: 262 RFLTGNINYHVEHHLFPDVPWYRLPRAHRLIKEALGERGLTIYTGYREFKLATLWQL 318

Length = 343

>gnl|CDD|238511 cd01060, Membrane-FADS-like, The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 77  ILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLE 136
           +LA        L   L +  HEL H   F +   NR LG L  L +G      +++ H  
Sbjct: 2   LLALLLGLLGGLG--LTVLAHELGHRSFFRSRWLNRLLGALLGLALGGSYG-WWRRSHRR 58

Query: 137 HHRFQGVDGIDMDIP 151
           HHR+    G D D  
Sbjct: 59  HHRYTNTPGKDPDSA 73

They are present in all groups of organisms with the exception of archaea. Membrane FADSs are non-heme, iron-containing, oxygen-dependent enzymes involved in regioselective introduction of double bonds in fatty acyl aliphatic chains. They play an important role in the maintenance of the proper structure and functioning of biological membranes. Alkane hydroxylases are bacterial, integral-membrane di-iron enzymes that share a requirement for iron and oxygen for activity similar to that of membrane FADSs, and are involved in the initial oxidation of inactivated alkanes. Beta-carotene ketolase and beta-carotene hydroxylase are carotenoid biosynthetic enzymes for astaxanthin and zeaxanthin, respectively. This superfamily domain has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of these sequences also reveals three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXX(X)H, HXX(X)HH, and HXXHH (an additional conserved histidine residue is seen between clusters 2 and 3). Spectroscopic and genetic evidence point to a nitrogen-rich coordination environment located in the cytoplasm with as many as eight histidines coordinating the two iron ions and a carboxylate residue bridging the two metals in the Pseudomonas oleovorans alkane hydroxylase (AlkB). In addition, the eight histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the rat stearoyl CoA delta-9 desaturase. Length = 122

>gnl|CDD|239583 cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 46/233 (19%), Positives = 70/233 (30%), Gaps = 50/233 (21%)

Query: 78  LATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEH 137
           L  A   G F     FLA H+  H   F     N+ LG+     +G        K H  H
Sbjct: 1   LLLAILLGLFWAQGGFLA-HDAGHGQVFKNRWLNKLLGLTVGNLLGASAGWWKNK-HNVH 58

Query: 138 HRFQGVDGIDMDI----PSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEF 193
           H +  + G D DI                  K     +Q  ++           P     
Sbjct: 59  HAYTNILGHDPDIDTLPLLARSEPAFGKDQKKRFLHRYQHFYF----------FPLLALL 108

Query: 194 INFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPD-------- 245
           +       L   +V   G     +L +   +         HF         +        
Sbjct: 109 L-------LAFLVVQLAG---GLWLAVVFQLN--------HFGMPVEDPPGESKNDWLER 150

Query: 246 --QETYSYYGP--LNFLTWHVGYHNEHHDFPRIPGNKLHK----VREVAPEYY 290
               T +  G   L++L   + Y  EHH FP +P +   K    VRE+  ++ 
Sbjct: 151 QVLTTRNITGSPFLDWLHGGLNYQIEHHLFPTMPRHNYPKVAPLVRELCKKHG 203

These desaturases are required for the synthesis of highly unsaturated fatty acids (HUFAs), which are mainly esterified into phospholipids and contribute to maintaining membrane fluidity. While HUFAs may be required for cold tolerance in bacteria, plants and fish, the primary role of HUFAs in mammals is cell signaling. These enzymes are described as front-end desaturases because they introduce a double bond between the pre-exiting double bond and the carboxyl (front) end of the fatty acid. Various substrates are involved, with both acyl-coenzyme A (CoA) and acyl-lipid desaturases present in this CD. Acyl-lipid desaturases are localized in the membranes of cyanobacterial thylakoid, plant endoplasmic reticulum (ER), and plastid; and acyl-CoA desaturases are present in ER membrane. ER-bound plant acyl-lipid desaturases and acyl-CoA desaturases require cytochrome b5 as an electron donor. Most of the eukaryotic desaturase domains have an adjacent N-terminal cytochrome b5-like domain. This domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain the residues: HXXXH, HXX(X)HH, and Q/HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homolog, stearoyl CoA desaturase. Length = 204

>gnl|CDD|239588 cd03511, Rhizopine-oxygenase-like, This CD includes the putative hydrocarbon oxygenase, MocD, a bacterial rhizopine (3-O-methyl-scyllo-inosamine, 3-O-MSI) oxygenase, and other related proteins

 Score = 47.0 bits (112), Expect = 6e-06
 Identities = 63/268 (23%), Positives = 103/268 (38%), Gaps = 43/268 (16%)

Query: 68  LLHDAGWLKILAT-----AYFFGSFLNHNLFLA-----------IHELSHNLAFSTPAYN 111
           LL  A WL  LA      A+ +GS+     FL             HE  H  AF+T   N
Sbjct: 18  LLDTALWLGALAVSGILIAWTWGSWWALPAFLVYGVLYAALFARWHECVHGTAFATRWLN 77

Query: 112 RWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDI---PSLTETRMVTNVVAKSIW 168
             +G +A L + +P    F+  H  HHR+  + G D ++      T    +  +     W
Sbjct: 78  DAVGQIAGLMILLP-PDFFRWSHARHHRYTQIPGRDPELAVPRPPTLREYLLALSGLPYW 136

Query: 169 V--IFQLLFYAFRPVFLKPK---PPGYWEFINFS--IQIALDITI----VYFWGWKSFAY 217
              +  +  +AF  V    K   P      +       +A+   +    +Y         
Sbjct: 137 WGKLRTVFRHAFGAVSEAEKPFIPAEERPKVVREARAMLAVYAGLIALSLYLGSPLLVLV 196

Query: 218 LILSTFVGGGMHPMAGHFISEH----YVFNPDQETYSYY--GPLNFLTWHVGYHNEHHDF 271
             L   +G  +  +    ++EH       N  + T +     PL FL W++ YH EHH +
Sbjct: 197 WGLPLLLGQPILRLFL--LAEHGGCPEDANDLRNTRTTLTNPPLRFLYWNMPYHAEHHMY 254

Query: 272 PRIPGN---KLHK-VREVAPEYYQGLAS 295
           P +P +   KLH+ +++  P  Y G  +
Sbjct: 255 PSVPFHALPKLHELIKDDLPVPYPGYIA 282

It has been proposed that MocD, MocE (Rieske-like ferredoxin), and MocF (ferredoxin reductase) under the regulation of MocR, act in concert to form a ferredoxin oxygenase system that demethylates 3-O-MSI to form scyllo-inosamine. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase. Length = 285

>gnl|CDD|239584 cd03507, Delta12-FADS-like, The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of organisms including higher plants, green algae, diatoms, nematodes, fungi, and bacteria

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 51/228 (22%), Positives = 81/228 (35%), Gaps = 24/228 (10%)

Query: 52  FPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYN 111
            P + ++ LL L  + LL    W         F +     LF+  H+  H         N
Sbjct: 11  APDILLLALLALAASLLLSWWLWPLYWIVQGLFLT----GLFVLGHDCGHGSFSDNRRLN 66

Query: 112 RWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIF 171
             +G + + P+ VP    ++  H  HH   G   ++ D         VT      +    
Sbjct: 67  DIVGHILHSPLLVPYHS-WRISHNRHHAHTG--NLEGDE----VWVPVTEEEYAELPKRL 119

Query: 172 QLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPM 231
               Y    + L    P Y   +N  +   +   +V  W       L+L T++     P 
Sbjct: 120 PYRLYRNPFLMLSLGWPYYL-LLNVLLYYLIPYLVVNAW-------LVLITYLQH-TFPD 170

Query: 232 AGHFISEHYVFNPDQET----YSYYGPLNFLTWHVGYHNEHHDFPRIP 275
              + ++ + F            Y G LN+LT  +G H  HH FPRIP
Sbjct: 171 IPWYRADEWNFAQAGLLGTVDRDYGGWLNWLTHIIGTHVAHHLFPRIP 218

The expression of these proteins appears to be temperature dependent: decreases in temperature result in increased levels of fatty acid desaturation within membrane lipids subsequently altering cell membrane fluidity. An important enzyme for the production of polyunsaturates in plants is the oleate delta-12 desaturase (Arabidopsis FAD2) of the endoplasmic reticulum. This enzyme accepts l-acyl-2-oleoyl-sn-glycero-3-phosphocholine as substrate and requires NADH:cytochrome b oxidoreductase, cytochrome b, and oxygen for activity. FAD2 converts oleate(18:1) to linoleate (18:2) and is closely related to oleate 12-hydroxylase which catalyzes the hydroxylation of oleate to ricinoleate. Plastid-bound desaturases (Arabidopsis delta-12 desaturase (FAD6), omega-3 desaturase (FAD8), omega-6 desaturase (FAD6)), as well as, the cyanobacterial thylakoid-bound FADSs require oxygen, ferredoxin, and ferredoxin oxidoreductase for activity. As in higher plants, the cyanobacteria delta-12 (DesA) and omega-3 (DesB) FADSs desaturate oleate (18:1) to linoleate (18:2) and linoleate (18:2) to linolenate (18:3), respectively. Omega-3 (DesB/FAD8) and omega-6 (DesD/FAD6) desaturases catalyze reactions that introduce a double bond between carbons three and four, and carbons six and seven, respectively, from the methyl end of fatty acids. As with other members of this superfamily, this domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homologue, stearoyl CoA desaturase. Mutation of any one of four of these histidines in the Synechocystis delta-12 acyl-lipid desaturase resulted in complete inactivity. Length = 222

>gnl|CDD|239587 cd03510, Rhizobitoxine-FADS-like, This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 72  AGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLG-ILANLPVGVPMSVTF 130
             WL  L      G+     L + +H+ +H L F     N +LG  LA +P+   ++  +
Sbjct: 16  PNWLAYLLAVLLIGARQ-RALAILMHDAAHGLLFRNRRLNDFLGNWLAAVPIFQSLA-AY 73

Query: 131 QKYHLEHHRFQG 142
           ++ HL+HHR  G
Sbjct: 74  RRSHLKHHRHLG 85

Dihydrorhizobitoxine desaturase is reported to be involved in the final step of rhizobitoxine biosynthesis. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase. Length = 175

>gnl|CDD|238511 cd01060, Membrane-FADS-like, The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 10/49 (20%)

Query: 234 HFISEHYVFNPDQET---------YSYYGPLNFLTW-HVGYHNEHHDFP 272
               EHY  +   +T          S  G LN L    +GYHNEHH FP
Sbjct: 74  VNYLEHYGGDRPFDTDGEWLRTTDNSRNGWLNLLLTGGLGYHNEHHLFP 122

They are present in all groups of organisms with the exception of archaea. Membrane FADSs are non-heme, iron-containing, oxygen-dependent enzymes involved in regioselective introduction of double bonds in fatty acyl aliphatic chains. They play an important role in the maintenance of the proper structure and functioning of biological membranes. Alkane hydroxylases are bacterial, integral-membrane di-iron enzymes that share a requirement for iron and oxygen for activity similar to that of membrane FADSs, and are involved in the initial oxidation of inactivated alkanes. Beta-carotene ketolase and beta-carotene hydroxylase are carotenoid biosynthetic enzymes for astaxanthin and zeaxanthin, respectively. This superfamily domain has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of these sequences also reveals three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXX(X)H, HXX(X)HH, and HXXHH (an additional conserved histidine residue is seen between clusters 2 and 3). Spectroscopic and genetic evidence point to a nitrogen-rich coordination environment located in the cytoplasm with as many as eight histidines coordinating the two iron ions and a carboxylate residue bridging the two metals in the Pseudomonas oleovorans alkane hydroxylase (AlkB). In addition, the eight histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the rat stearoyl CoA delta-9 desaturase. Length = 122

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	329
KOG2987	324	consensus Fatty acid desaturase [Lipid transport a	100.0
PLN02579	323	sphingolipid delta-4 desaturase	100.0
cd03508	289	Delta4-sphingolipid-FADS-like The Delta4-sphingoli	100.0
cd03511	285	Rhizopine-oxygenase-like This CD includes the puta	100.0
PLN02598	421	omega-6 fatty acid desaturase	100.0
PLN02498	450	omega-3 fatty acid desaturase	100.0
PLN03198	526	delta6-acyl-lipid desaturase; Provisional	100.0
cd03514	207	CrtR_beta-carotene-hydroxylase Beta-carotene hydro	99.98
cd03509	288	DesA_FADS-like Fatty acid desaturase protein famil	99.98
COG3239	343	DesA Fatty acid desaturase [Lipid metabolism]	99.97
PLN03199	485	delta6-acyl-lipid desaturase-like protein; Provisi	99.97
PLN02505	381	omega-6 fatty acid desaturase	99.97
cd03510	175	Rhizobitoxine-FADS-like This CD includes the dihyd	99.97
cd03513	225	CrtW_beta-carotene-ketolase Beta-carotene ketolase	99.96
cd03506	204	Delta6-FADS-like The Delta6 Fatty Acid Desaturase	99.95
PF00487	257	FA_desaturase: Fatty acid desaturase This entry is	99.95
cd03507	222	Delta12-FADS-like The Delta12 Fatty Acid Desaturas	99.94
KOG4232	430	consensus Delta 6-fatty acid desaturase/delta-8 sp	99.93
cd03512	314	Alkane-hydroxylase Alkane hydroxylase is a bacteri	99.87
cd01060	122	Membrane-FADS-like The membrane fatty acid desatur	99.69
PF08557	39	Lipid_DES: Sphingolipid Delta4-desaturase (DES); I	99.23
COG1398	289	OLE1 Fatty-acid desaturase [Lipid metabolism]	99.02
PLN02220	299	delta-9 acyl-lipid desaturase	98.88
cd03505	178	Delta9-FADS-like The Delta9 Fatty Acid Desaturase	98.49
KOG1600	321	consensus Fatty acid desaturase [Lipid transport a	98.48

>KOG2987 consensus Fatty acid desaturase [Lipid transport and metabolism]

Probab=100.00  E-value=1.6e-69  Score=466.36  Aligned_cols=317  Identities=61%  Similarity=1.092  Sum_probs=303.2

Q ss_pred             ccccCCCceecCCCCCcHHHHHHHHhhChHHhhhhCCCCCchHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 020224           11 EGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNH   90 (329)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~r~~~i~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~a~~~~~~~w~~~~~~~~~l~~~~~~   90 (329)
                      +.++++||+|+++||||+.||++|++++||+|+|+++||+..+.++.++++++.+++++.+.+|-.++..|.++|+++.+
T Consensus         3 ~~~sr~dF~W~yTeePHasRR~eIL~kyPeIk~Lfg~dp~~kwvv~~~Vi~Q~~~~~ll~dl~W~~il~~AYf~gg~iNh   82 (324)
T KOG2987|consen    3 QSVSRTDFEWVYTEEPHASRRKEILAKYPEIKSLFGPDPNLKWVVLGMVILQILAAYLLRDLDWKWILFIAYFFGGFINH   82 (324)
T ss_pred             CCccccceeEEecCCcchhHHHHHHHhChHHHHHhCCCcchHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHhhhhhch
Confidence            35677799999999999999999999999999999999999999999999999999999999997666679999999999


Q ss_pred             HHHHHHHhhccccccCC--hhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCCChhHHHHHHHHHHHHHH
Q 020224           91 NLFLAIHELSHNLAFST--PAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIW  168 (329)
Q Consensus        91 ~~~~l~He~~H~~~~~~--~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~~~~~~~l~~~~~~~~~  168 (329)
                      .++...||.+|+..|++  +-.|+++|.++.+|+|+|++.+++.-|+.||++.+.++-|.|+++..|..++.+.+++..|
T Consensus        83 sl~LAIHeiSHN~aFg~~rpl~NR~~g~fANLPigvP~siSFkkYHleHHry~G~DgiDtDvPT~~Ea~~f~t~~~K~iw  162 (324)
T KOG2987|consen   83 SLTLAIHEISHNLAFGTNRPLYNRIFGFFANLPIGVPMSISFKKYHLEHHRYLGVDGIDTDVPTRFEAWLFDTAFGKLIW  162 (324)
T ss_pred             hHHHHHHHhhhhhhcccCchHHHHHHHHhhcCcccCceeeeehhhhhHHhHhcCCccccCCCCchhheehhhhhhHHHHH
Confidence            99999999999999987  7899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhhccCCCCCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhcccccccccccccCCCCcc
Q 020224          169 VIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQET  248 (329)
Q Consensus       169 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~~~l~~~~~~~~l~~~~~h~~~eH~~~~~~~~t  248 (329)
                      .++++++|++||++.++|+...+|..+.++++.+..+++.++||+.+.|++.+.++++.++|..+|+++||+.+.++++|
T Consensus       163 ~~lQpfFY~fRPl~i~pkp~t~me~iN~iiQ~~fd~li~~f~G~ksl~Yll~~s~lg~gLHP~aGHFisEHY~f~k~~ET  242 (324)
T KOG2987|consen  163 VTLQPFFYAFRPLFIYPKPPTDMEFINTIIQLSFDLLIVYFFGWKSLAYLLASSFLGMGLHPIAGHFISEHYMFKKGQET  242 (324)
T ss_pred             HHHHHHHHhhhhheecCCCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCCCcccchhhHhhhhhcCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccchhhccccccccccCCCCCCccCHHHHhHhhHhhhhcCCCCccHHHHHHHHHhCCCCCCCcccccCCCCCcc
Q 020224          249 YSYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSATKK  327 (329)
Q Consensus       249 ~s~~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~~~~~~~~~sy~~~l~~~v~~~~~~~~~~~~~~~~~~~~  327 (329)
                      +|++|++||+++|.|||+|||.||.||.++||+++++.+|||+++|.++||.+++.+||+||.+|+++|+|||.++.+.
T Consensus       243 ySYYGplN~~tfNvGYH~EHHDFP~Ipg~~Lp~Vr~iApEyYd~lp~~~Sw~~vlydfi~d~~vgpy~RvKRk~~~~~~  321 (324)
T KOG2987|consen  243 YSYYGPLNLLTFNVGYHVEHHDFPYIPGSRLPKVREIAPEYYDNLPQHKSWVGVLYDFIMDPTVGPYARVKRKYRKADI  321 (324)
T ss_pred             eeeecceeeEEEecccccccccCCCCCccccHHHHHhhHHHhcCchhhchHHHHHHHHHcCCCcChHHHHhhhhhcccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999998877653

>PLN02579 sphingolipid delta-4 desaturase

Probab=100.00  E-value=4.9e-65  Score=471.73  Aligned_cols=315  Identities=82%  Similarity=1.447  Sum_probs=286.8

Q ss_pred             cccccCCCceecCCCCCcHHHHHHHHhhChHHhhhhCCCCCchHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 020224           10 EEGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLN   89 (329)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~r~~~i~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~a~~~~~~~w~~~~~~~~~l~~~~~   89 (329)
                      ++..+++||+|++.||||++||++|++++||+++++++|+...+.+++++++++.++.++...+|+..++++++++++++
T Consensus         6 ~~~~~~~~f~w~~~~~~h~~rr~~il~~ype~~~l~~~d~~~~~k~~~~v~~~~~~~~l~~~~~w~~~l~~a~~~~g~~~   85 (323)
T PLN02579          6 EEGVMATDFFWSYTDEPHASRRREILSKYPQIKELFGPDPWAFPKIAAVVLLQLCTATLLHDAGWPKILLVAYFFGGFLN   85 (323)
T ss_pred             cccCCccceeECCchhhHHHHHHHHHHhchHhhcccCCCchHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence            44567799999999999999999999999999999999999998888888777777777777889877666778888888


Q ss_pred             HHHHHHHHhhccccccCChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Q 020224           90 HNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWV  169 (329)
Q Consensus        90 ~~~~~l~He~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~~~~~~~l~~~~~~~~~~  169 (329)
                      +++++++|||+|+++|+++++|+++|.++++++|+|+...|+..|+.||+++|+++.|||+++..|.+++++.+++..|.
T Consensus        86 ~~lf~~~HD~~Hg~~f~~~~~N~~lg~~~~l~~g~~~~~~~~~~H~~HH~~~n~~~~D~Di~t~~E~~l~~~~~~~~~~~  165 (323)
T PLN02579         86 HNLFLAIHELSHNLAFKTPVYNRWLGIFANLPIGIPMSVTFQKYHLEHHRFQGVDGIDMDIPSQGEARLVRNTLSKIVWV  165 (323)
T ss_pred             HHHHHHHHHhhHhhhcCCHHHHHHHHHHHHHhhcCCHhHHHHHHHHHHccCCCCCCCCCCCCchhhHHHHHHHHHHHHHH
Confidence            89999899999999999999999999988999999997338989999999999998999999988999889888898998


Q ss_pred             HHHHHHHHhhhhccCCCCCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhcccccccccccccCCCCccc
Q 020224          170 IFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPDQETY  249 (329)
Q Consensus       170 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~~~l~~~~~~~~l~~~~~h~~~eH~~~~~~~~t~  249 (329)
                      +++++++.+|+.+.++++..+++..++++++++.++++++.||.+++|++++.+++..++|..+++++||+...++++|+
T Consensus       166 ~~~~~f~~~rp~~~~~~~~~~~~~in~~~~~~~~~~l~~~~G~~~llyl~~~~~~~~~lhp~~g~~~~ehy~~~~~~ety  245 (323)
T PLN02579        166 FLQLFFYALRPLFVNPKPPGLWEFINLLTQIAFDAALVYFAGWKSLAYLILSTFLGGGLHPMAGHFISEHYVFNPGQETY  245 (323)
T ss_pred             HHHHHHHHhhHHhhccCCchHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcccccccceeeccceeccCCCCce
Confidence            88888889998876666666778888888888888888888999999998999999899999999999999988889999


Q ss_pred             ccccccchhhccccccccccCCCCCCccCHHHHhHhhHhhhhcCCCCccHHHHHHHHHhCCCCCCCcccccCCCC
Q 020224          250 SYYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRKPSA  324 (329)
Q Consensus       250 s~~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~~~~~~~~~sy~~~l~~~v~~~~~~~~~~~~~~~~~  324 (329)
                      |++|++||+++|+|||.|||+||+|||++||+++++.+|+++++|+++||.+++++||.||.+|+++|.+|+.+.
T Consensus       246 syyg~ln~l~~NigYH~eHH~fP~IP~~~Lp~l~~~~pe~y~~l~~~~sw~~~~~~fi~~~~~~~~~r~~r~~~~  320 (323)
T PLN02579        246 SYYGPLNLLTWNVGYHNEHHDFPRIPGSKLHKVKEIAPEYYDNLKSYKSWSQVIYMYIMDPTIGPFSRMKRKPPK  320 (323)
T ss_pred             eehhHHHHHhhcccccHhhcCCCCCchhhHHHHHHhCHHHHhCCCCcCcHHHHHHHHHcCCCCCcceeeeecccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999876

>cd03508 Delta4-sphingolipid-FADS-like The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase (MLD), reported to modulate biosynthesis of the epidermal growth factor receptor; and other related proteins

Probab=100.00  E-value=1.5e-56  Score=410.36  Aligned_cols=288  Identities=61%  Similarity=1.152  Sum_probs=256.6

Q ss_pred             HHhhChHHhhhhCCCCCchHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHH
Q 020224           34 ILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRW  113 (329)
Q Consensus        34 i~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~a~~~~~~~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~  113 (329)
                      |+|++||+|+|+++||...++.++.+++++++++++.+.+||..+++++++++.+++++++++|||+|+++|+++++|++
T Consensus         1 i~~~~pei~~L~~~~~~~~~~~~~~v~~~~~~~~~l~~~sw~~~ll~a~vi~~~~~~~l~~l~Hd~~H~~~f~~~~~N~~   80 (289)
T cd03508           1 ILAKYPEIKKLFGPDPLTKWVVLGVVLLQIITAYLLRDSSWWKILLVAYFFGGTINHSLFLAIHEISHNLAFGKPLWNRL   80 (289)
T ss_pred             CcccchHHHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCChHHHHH
Confidence            57899999999999999999999999988888888888899877777888888888999999999999999999999999


Q ss_pred             HHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcHHHH
Q 020224          114 LGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEF  193 (329)
Q Consensus       114 ~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  193 (329)
                      +|.++++++|.|+.+.||..|+.||+++|++++|||+.+..+.+++++.+++..|..+.++++..|+...++++..++++
T Consensus        81 ~g~~~~~~~g~p~~~~~r~~H~~HH~~~n~~~~DpDi~~~~~~~l~~~~~g~~~~~~~~~~~~~~rp~~~~~~~~~~~~~  160 (289)
T cd03508          81 FGIFANLPIGVPYSISFKKYHLEHHRYLGEDGLDTDIPTEFEGKLFSTVLGKAIWVTLQPFFYALRPLFVRPKPPTRLEV  160 (289)
T ss_pred             HHHHHHHHhcCChhhHHHHHHHHhccCCCCCCCCCCcchHHHHHHHhCchHHHHHHHHHHHHHHhcccccCCCcchhHHH
Confidence            99999999999998448999999999999998999999988888888888888887666777778876554445556778


Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhcccccccccccccC-CCCcccccccccchhhccccccccccCCC
Q 020224          194 INFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFN-PDQETYSYYGPLNFLTWHVGYHNEHHDFP  272 (329)
Q Consensus       194 ~~~~~~~~~~~~l~~~~g~~~l~~~l~~~~~~~~l~~~~~h~~~eH~~~~-~~~~t~s~~~~~~~l~~n~~yH~eHHlfP  272 (329)
                      .+.++++++.+++++..||.+++|++...+++.+++|..+|+++||+... +.++|+|+++++|++++|+|||.|||++|
T Consensus       161 ~n~~~~~~~~~~l~~~~G~~~~lyll~~~~~~~~~~p~~g~~i~Eh~~~~~~~~~t~S~y~~~~~~~~n~~yH~~HH~~p  240 (289)
T cd03508         161 INIVVQITFDYLIYYFFGWKSLAYLLLGSFLGGGLHPLAGHFISEHYVFTGKGQETYSYYGPLNLLTFNVGYHNEHHDFP  240 (289)
T ss_pred             HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcccccccccccccccccCcCCccchHHHHHHhhccChHHHhcCCC
Confidence            88888777777777788998777877778888888899999999999876 66899998899999999999999999999


Q ss_pred             CCCccCHHHHhHhhHhhhhcCCCCccHHHHHHHHHhCCCCCCCcccccC
Q 020224          273 RIPGNKLHKVREVAPEYYQGLASYKSWSQVIYMYIMDRTVGPFSRMKRK  321 (329)
Q Consensus       273 ~vP~~~Lp~l~~~~~~~~~~~~~~~sy~~~l~~~v~~~~~~~~~~~~~~  321 (329)
                      +||||+||++++..++++++.++.+||.+++++|+.++++|+++|++|+
T Consensus       241 ~iP~~~Lp~~~~~~~~~~~~~~~~~~y~~v~~~~~~~~~~~~~~r~~r~  289 (289)
T cd03508         241 YIPGTRLPKLRKIAPEFYDNLPQHTSWPRVLYDFIMDDNVGPYSRVKRK  289 (289)
T ss_pred             CCCcccHHHHHHHCHHHHhCCCcCCCHHHHHHHHhcCCCCCCcccccCC
Confidence            9999999999999999999988899999999999999999999999995

These proteins are found in various eukaryotes including vertebrates, higher plants, and fungi. Studies show that MLD is localized to the endoplasmic reticulum. As with other members of this superfamily, this domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for

>cd03511 Rhizopine-oxygenase-like This CD includes the putative hydrocarbon oxygenase, MocD, a bacterial rhizopine (3-O-methyl-scyllo-inosamine, 3-O-MSI) oxygenase, and other related proteins

Probab=100.00  E-value=4.1e-35  Score=270.60  Aligned_cols=259  Identities=23%  Similarity=0.285  Sum_probs=162.1

Q ss_pred             hHHhhhhCCCCCchHHHHHHHHHHHHHH--HHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHH
Q 020224           39 PQIKELFGPDPWAFPKVTVVVLLQLYTA--TLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGI  116 (329)
Q Consensus        39 ~~~~~l~~~~~~~~~~~l~~~~~~~~~a--~~~~~~~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g~  116 (329)
                      .|+++|+++|+++..+.++..++.++++  .+....++|..+++++++ +.++.+++.++|||+|+++++++++|+++|.
T Consensus         4 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~He~~H~~~~~~~~~N~~~g~   82 (285)
T cd03511           4 QELKQLMQRSDAPGLLDTALWLGALAVSGILIAWTWGSWWALPAFLVY-GVLYAALFARWHECVHGTAFATRWLNDAVGQ   82 (285)
T ss_pred             HHHHHHhCCcchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHhhcccccCCchHHHHHHH
Confidence            5788999999999988877664443332  222223343333434444 4446788889999999999999999999999


Q ss_pred             HhcccccCccChhhhHhhhhhhcCCCCCCCCCCCCChhHH---HHHHHHHHHHHHH-HHHHHHHH-hhhhccCCC---C-
Q 020224          117 LANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTET---RMVTNVVAKSIWV-IFQLLFYA-FRPVFLKPK---P-  187 (329)
Q Consensus       117 l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~~~~~---~~l~~~~~~~~~~-~~~~~~~~-~r~~~~~~~---~-  187 (329)
                      +++.++|.|+.. ||..|+.||+++|++++|||.......   +.+....+...|. .+..++.. ........+   + 
T Consensus        83 l~~~~~~~~~~~-~~~~H~~HH~~~~~~~~Dpd~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  161 (285)
T cd03511          83 IAGLMILLPPDF-FRWSHARHHRYTQIPGRDPELAVPRPPTLREYLLALSGLPYWWGKLRTVFRHAFGAVSEAEKPFIPA  161 (285)
T ss_pred             HHHHHhcCChHH-HHHHHHHHhcCcCCCCCCCCCCCCCchHHHHHHHHHhChHHHHHHHHHHHHHHhcccccccCCCCCH
Confidence            888999999995 999999999999999899998542211   1222222222221 11111110 100000011   0 


Q ss_pred             CcHHHH-HHH---HHHHHHHHHHHHHhh-hHHHHHHHHHHHHhhhhhcccccccccccccCCC----Cccccc--ccccc
Q 020224          188 PGYWEF-INF---SIQIALDITIVYFWG-WKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPD----QETYSY--YGPLN  256 (329)
Q Consensus       188 ~~~~~~-~~~---~~~~~~~~~l~~~~g-~~~l~~~l~~~~~~~~l~~~~~h~~~eH~~~~~~----~~t~s~--~~~~~  256 (329)
                      ..+.+. ...   ++..+..+++....| +..+.++++|.+++..+..  ...+.||.+.++.    .+|||.  .++++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~wllP~l~~~~~~~--~~~~~eH~~~~~~~~~~~~trs~~~~~~~~  239 (285)
T cd03511         162 EERPKVVREARAMLAVYAGLIALSLYLGSPLLVLVWGLPLLLGQPILR--LFLLAEHGGCPEDANDLRNTRTTLTNPPLR  239 (285)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH--HHHHhhcCCCCcccchhhhhhhhhhhHHHH
Confidence            111111 111   111222222222334 3445566777776554421  2358899876542    245652  34689


Q ss_pred             hhhccccccccccCCCCCCccCHHHHhHhhHhhhhcCCCCccHHHHH
Q 020224          257 FLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLASYKSWSQVI  303 (329)
Q Consensus       257 ~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~~~~~~~~~sy~~~l  303 (329)
                      ++++|+|||.|||+||+|||||||++++.+++-.++.  ..||.+++
T Consensus       240 ~l~~n~nyH~eHHl~P~vP~y~Lp~~h~~L~~~~~~~--~~~y~~~~  284 (285)
T cd03511         240 FLYWNMPYHAEHHMYPSVPFHALPKLHELIKDDLPVP--YPGYIAVY  284 (285)
T ss_pred             HHHcCCchHHHHhcCCCCcHhHHHHHHHHHHHhCCCC--CCcHHHHh
Confidence            9999999999999999999999999999998865533  47886654

It has been proposed that MocD, MocE (Rieske-like ferredoxin), and MocF (ferredoxin reductase) under the regulation of MocR, act in concert to form a ferredoxin oxygenase system that demethylates 3-O-MSI to form scyllo-inosamine. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA d

>PLN02598 omega-6 fatty acid desaturase

Probab=100.00  E-value=2.1e-34  Score=275.58  Aligned_cols=280  Identities=17%  Similarity=0.142  Sum_probs=179.3

Q ss_pred             cccccccccCCCceecCCCCCcHHHHHHHHhhChHHhhhhCCCCCchHHHHHHHHHHHHHHHHHh-ccchHHHHHHHHHH
Q 020224            6 GEEREEGVMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLH-DAGWLKILATAYFF   84 (329)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~i~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~a~~~~-~~~w~~~~~~~~~l   84 (329)
                      +|||.+.++.-+|.-++.+.|...+.++|.++.|  +++|++|+++++..++..++.++++++.. ..+|+.+.+ ++++
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~tl~~i~~aiP--~~~F~~s~~rs~~~l~~~i~~~~~~~~~~~~~~w~~~~l-~~~~  131 (421)
T PLN02598         55 AEERKQLAESYGFTQIGEPLPDNVTLKDVVKTLP--KEVFEIDDFKAWKTVAITVTSYALGLAAIAVAPWYLLPL-AWAW  131 (421)
T ss_pred             HHHHHHHHHhhChhhcCCcCCCCcCHHHHHHhCC--HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHH
Confidence            5899999999999999999998889999999999  99999999999888777655554444332 334555444 4445


Q ss_pred             HHHHHHHHHHHHHhhccccccCChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCCChhHHH-----HH
Q 020224           85 GSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETR-----MV  159 (329)
Q Consensus        85 ~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~~~~~~-----~l  159 (329)
                      .|.++.++++++|||+|+++++++++|+++|.+++.++++|+.. ||..|+.||++||+.++|||..+..+..     .+
T Consensus       132 ~G~~~~~l~vl~Hec~H~s~~~~~~lN~~vG~~~~~~ll~p~~~-wr~~H~~HH~~tn~~~~D~~~~p~t~~e~~~~~~~  210 (421)
T PLN02598        132 LGTAITGFFVIGHDCGHNSFSKNQLVEDIVGTIAFTPLIYPFEP-WRIKHNTHHAHTNKLVMDTAWQPFRPHQFDNADPL  210 (421)
T ss_pred             HHHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhcCCHHH-HHHHHHHHccCcCCCCCCCCcCCcCHHHHhhcCHH
Confidence            55557899999999999999999999999999888888999995 9999999999999999999886532111     11


Q ss_pred             HHHHHHHHHHHHHHHHHHh------hhhccCC--CCCcHHHH-HHHHHHHH----HHHHHHHHhhh-HHHHHHHHHHHHh
Q 020224          160 TNVVAKSIWVIFQLLFYAF------RPVFLKP--KPPGYWEF-INFSIQIA----LDITIVYFWGW-KSFAYLILSTFVG  225 (329)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~------r~~~~~~--~~~~~~~~-~~~~~~~~----~~~~l~~~~g~-~~l~~~l~~~~~~  225 (329)
                      .+++.+   .+.++++...      ...+..+  ++..+..+ ...+..++    .+..+....|. .++.++++|.++.
T Consensus       211 ~r~l~~---~~~GP~yl~~~~~~~~~~hf~~~~f~~~er~~v~~S~~~v~~~~~~~l~~~~~~~G~~~~~~~ylvP~Lv~  287 (421)
T PLN02598        211 RKAMMR---AGMGPLWWWASIGHWLFWHFDLNKFRPQEVPRVKISLAAVFAFMALGLPPLLYTTGPVGFVKWWLMPWLGY  287 (421)
T ss_pred             HHHHHH---HhHhHHHHHHhhhcceeeccCcccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            111111   1112221111      0011111  11111111 11111111    11112222343 3344445555443


Q ss_pred             hhhhcc---ccc--cccccccc-----CCCC--cccc--cccccchhhccccccccccCCCCCCccCHHHHhHhhHhhhh
Q 020224          226 GGMHPM---AGH--FISEHYVF-----NPDQ--ETYS--YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQ  291 (329)
Q Consensus       226 ~~l~~~---~~h--~~~eH~~~-----~~~~--~t~s--~~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~~~  291 (329)
                      ..+..+   ..|  ...+|+..     ..++  +|.+  +..+++++++|+|||++||+||+||+|+||++++.+++...
T Consensus       288 ~~wl~~it~lhHt~p~ip~~~~~eW~~~~~al~~Tv~~~~~~~~~~L~hnIn~HV~HHLfP~IP~Y~lpea~~alk~~~g  367 (421)
T PLN02598        288 HFWMSTFTMVHHTAPHIPFKQAREWNAAQAQLNGTVHCDYPAWIEFLCHDISVHIPHHISSKIPSYNLRKAHASLQENWG  367 (421)
T ss_pred             HHHHHHHHHHhhcCCCCCccccccccHhhhhhcCceecCCcHHHHHHHcCCccchhhhcCCCCCcchHHHHHHHHHHHhc
Confidence            332111   111  11222211     1112  2433  33467999999999999999999999999999999988766


Q ss_pred             c
Q 020224          292 G  292 (329)
Q Consensus       292 ~  292 (329)
                      +
T Consensus       368 ~  368 (421)
T PLN02598        368 K  368 (421)
T ss_pred             c
Confidence            4

>PLN02498 omega-3 fatty acid desaturase

Probab=100.00  E-value=2.3e-31  Score=253.26  Aligned_cols=260  Identities=18%  Similarity=0.204  Sum_probs=157.8

Q ss_pred             HHHHHHHHhhChHHhhhhCCCCCchHHHHHHHHHHHHHHH--HHhccchHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 020224           28 ASRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTAT--LLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAF  105 (329)
Q Consensus        28 ~~r~~~i~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~a~--~~~~~~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~  105 (329)
                      .-+.++|.++.|  +++|++|+++++..++..++.+++++  +....+|+++.+..++ .|.++.++++++|||+|++++
T Consensus       101 ~~tl~dir~aIP--~hcF~~s~~rs~~yv~~d~~vi~~l~~~a~~~~~w~~wpl~w~~-~G~~~~gL~vl~HDcgHgsf~  177 (450)
T PLN02498        101 PFNLADIRAAIP--KHCWVKNPWRSMSYVVRDVAVVFGLAAAAAYFNNWVVWPLYWFA-QGTMFWALFVLGHDCGHGSFS  177 (450)
T ss_pred             CCCHHHHHHhCC--HHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHhccccccc
Confidence            457789999999  89999999999877776644332222  2223456655554444 455579999999999999999


Q ss_pred             CChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCCChhHHHH--H---HHHHHHH--HHHHHHHHHHHh
Q 020224          106 STPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRM--V---TNVVAKS--IWVIFQLLFYAF  178 (329)
Q Consensus       106 ~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~~~~~~~--l---~~~~~~~--~~~~~~~~~~~~  178 (329)
                      +++++|+++|.+++.++++|+.. ||..|..||++||+.++||+..+..+..+  +   ...+...  +..+.-+++...
T Consensus       178 ~~k~lNd~vG~ll~~~ll~py~~-Wr~sH~~HH~~Tn~~e~D~~~~P~t~~~y~~l~~~~~~~~~~~~~~~~g~p~YL~~  256 (450)
T PLN02498        178 NNPKLNSVVGHLLHSSILVPYHG-WRISHRTHHQNHGHVENDESWHPLSEKIYKSLDKVTRTLRFTLPFPMLAYPFYLWS  256 (450)
T ss_pred             cChHHHHHHHHHHHHHhcCCHHH-HHHHHHHHhcCCCCCCCCCCCCcchHHHHHhccccchHHHHHHHHHHHHHHHHHhh
Confidence            99999999998888889999995 99999999999999999999854321110  0   0111000  001111111111


Q ss_pred             h----h--hccCCC----CCcHHHH----HHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHhhhhhcccc---cc----c
Q 020224          179 R----P--VFLKPK----PPGYWEF----INFSIQIALDITIVYFWGWK-SFAYLILSTFVGGGMHPMAG---HF----I  236 (329)
Q Consensus       179 r----~--~~~~~~----~~~~~~~----~~~~~~~~~~~~l~~~~g~~-~l~~~l~~~~~~~~l~~~~~---h~----~  236 (329)
                      +    .  -|....    +..+..+    ..+++.+++++.+....|+. .+.++++|.++...|..++.   |.    -
T Consensus       257 ~~~g~~~sHF~p~s~lF~~~er~~V~~S~~~~~~~~~~l~~l~~~~G~~~~l~~Y~vP~lv~~~WL~~iTyLhHt~~~~~  336 (450)
T PLN02498        257 RSPGKKGSHFHPDSDLFVPKERKDVITSTACWTAMAALLVCLSFVMGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDK  336 (450)
T ss_pred             hccCCcCcccCCCcccCChhhhhheeeehHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCC
Confidence            1    0  011100    0111111    11222222223333345653 34445566554444422211   11    1


Q ss_pred             ccccc-----cCCCC-cccc-cccccchhhccccccccccCCCCCCccCHHHHhHhhHhhhh
Q 020224          237 SEHYV-----FNPDQ-ETYS-YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQ  291 (329)
Q Consensus       237 ~eH~~-----~~~~~-~t~s-~~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~~~  291 (329)
                      ..|+.     +.+++ .|.+ .+|++|++++||++|+.||+||+||+|||+++++.+++.+.
T Consensus       337 iP~y~~~eWs~~rGaL~TvDR~yg~i~~l~H~I~tHV~HHlf~~IPhYhl~eAt~aiK~~lg  398 (450)
T PLN02498        337 LPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLG  398 (450)
T ss_pred             CCCCCCCCcchhhccceeecCcccchhhhhcCcccchhhhccCCCCCcCHHHHHHHHHHHhH
Confidence            12222     11222 2323 24899999999999999999999999999999998876444

>PLN03198 delta6-acyl-lipid desaturase; Provisional

Probab=100.00  E-value=3.4e-31  Score=260.48  Aligned_cols=262  Identities=19%  Similarity=0.235  Sum_probs=157.1

Q ss_pred             hhhhCCCCCchHHHHHHHHHHHHHHHHH--hccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHHH-h
Q 020224           42 KELFGPDPWAFPKVTVVVLLQLYTATLL--HDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGIL-A  118 (329)
Q Consensus        42 ~~l~~~~~~~~~~~l~~~~~~~~~a~~~--~~~~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g~l-~  118 (329)
                      +++|++++.+....++.+++.+++++++  ...++|..+++++++|.+ ++.+++++|||+|+++++++++|+++|.+ .
T Consensus       199 ~G~fk~~~~~y~~~l~~~i~l~a~~~~~~~~~~~~~~~ll~a~llgl~-~~q~g~l~HD~~H~s~~~~~~~n~~~g~~~~  277 (526)
T PLN03198        199 EQLFKSSKLYYVFKLLTNIAIFAASIAIICCSKSISAVLASACMMALC-FQQCGWLSHDFLHNQVFETRWLNEVVGYLIG  277 (526)
T ss_pred             ccccccCcceeHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH-HHHHHHHHHhcccccccCCcHHHHHHHHHHH
Confidence            4789999987766666554444443332  222333344556666665 67777889999999999999999999966 5


Q ss_pred             cccccCccChhhhHhhhhhhcCCCCCC-----CCCCCCChh----HH--------HHHHHHHHHHHHHHHHHH------H
Q 020224          119 NLPVGVPMSVTFQKYHLEHHRFQGVDG-----IDMDIPSLT----ET--------RMVTNVVAKSIWVIFQLL------F  175 (329)
Q Consensus       119 ~~~~g~~~~~~wr~~H~~HH~~~~~~~-----~Dpd~~~~~----~~--------~~l~~~~~~~~~~~~~~~------~  175 (329)
                      .+++|.|+.+ |+..|+.||.+||..+     .|||+....    ..        +........+.+.+++.+      +
T Consensus       278 ~~~~G~s~~~-W~~~Hn~HH~~tN~~~~~~~~~DpDI~~~pl~~~~~~~~~~~~~~~~~~~~~yQh~~f~~ll~l~~~~~  356 (526)
T PLN03198        278 NAVLGFSTGW-WKEKHNLHHAAPNECDQLYQPIDEDIDTLPLIAWSKDILATVENKTFLRILQYQHLFFMALLFFARGSW  356 (526)
T ss_pred             HhhcCCCHHH-HHHHHHHhccCCCCCCccCCCCCCCcCccceeEechhhhhcchhhhHHHHHhhhhHHHHHHHHHHHHHH
Confidence            6778999997 9999999999999987     699996531    11        111111112222111110      1


Q ss_pred             --HHhhhhccCCCC-Cc-HHHHHHHHHHHHHHH-HHHH-HhhhHHHHHHHHHHHHhhhhhcccccccccccccC-----C
Q 020224          176 --YAFRPVFLKPKP-PG-YWEFINFSIQIALDI-TIVY-FWGWKSFAYLILSTFVGGGMHPMAGHFISEHYVFN-----P  244 (329)
Q Consensus       176 --~~~r~~~~~~~~-~~-~~~~~~~~~~~~~~~-~l~~-~~g~~~l~~~l~~~~~~~~l~~~~~h~~~eH~~~~-----~  244 (329)
                        ...+....++.+ .. ..+...+++++++.. +.+. +.+|..++++++..+++..+..  ..+..+|...+     .
T Consensus       357 ~~~s~~~~~~~~~~~~~~~~e~~~~l~~~~~~~~l~l~~~~~~~~l~~~~l~~~~~g~~l~--~vF~lnH~~~~v~~~~~  434 (526)
T PLN03198        357 LFWSWRYTSTAKLAPADRLLEKGTILFHYFWFIGTACYLLPGWKPLVWMAVTELMCGMLLG--FVFVLSHNGMEVYNKSK  434 (526)
T ss_pred             HHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH--hhhhccccCCCCCCCCc
Confidence              112211111111 11 124444444443332 2222 3345544443333333322211  01233333211     1


Q ss_pred             C------Cccccc--ccccchhhccccccccccCCCCCCccCHHHHhHhhHhhhh--cCCCC-ccHHHHHHHHH
Q 020224          245 D------QETYSY--YGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQ--GLASY-KSWSQVIYMYI  307 (329)
Q Consensus       245 ~------~~t~s~--~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~~~--~~~~~-~sy~~~l~~~v  307 (329)
                      +      ..|+++  +.+++|+++|+|||+||||||+||++|||+++++++++|+  ++||. .++++.+.+-+
T Consensus       435 dw~~~Qv~tT~n~~~~~~~~wf~GGLN~QiEHHLFP~iP~~~l~~i~piVk~~C~k~GlpY~~~~~~~a~~~~l  508 (526)
T PLN03198        435 EFVNAQIVSTRDIKANIFNDWFTGGLNRQIEHHLFPTMPRHNLNKIAPQVEAFCIKHGLVYEDVSIAAGTCKVL  508 (526)
T ss_pred             CHHHHHHhcCcCcCCchHHHHhhcCCcccchhhcCCCCchhhHHHHhHHHHHHHHHcCCCCCCCCHHHHHHHHH
Confidence            1      234443  3468999999999999999999999999999999999999  57886 57777665543

>cd03514 CrtR_beta-carotene-hydroxylase Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae

Probab=99.98  E-value=4.7e-32  Score=238.30  Aligned_cols=181  Identities=21%  Similarity=0.314  Sum_probs=125.6

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCC
Q 020224           72 AGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIP  151 (329)
Q Consensus        72 ~~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~  151 (329)
                      .+|++..+ ++++++.++..+++++|||+|++++++|++|+++|.+++++.|.|+.. ||..|+.||+++|++++|||..
T Consensus        19 ~~~~~~~~-~~~~~~~~~~~~~~~~Hda~H~~~~~~~~~N~~~g~~~~~~~~~~~~~-w~~~H~~HH~~~~~~~~DpD~~   96 (207)
T cd03514          19 ISYLPLWV-CFILNTLSLHLAGTVIHDASHKAASRNRWINELIGHVSAFFLGFPFPV-FRRVHMQHHAHTNDPEKDPDHF   96 (207)
T ss_pred             HccchHHH-HHHHHHHHHHHHHHHHHHcccccccCCccHHHHHHHHHHHHHhCCHHH-HHHHHHHHhcCcCcCCcCccHH
Confidence            34555434 556667777889999999999999999999999998888899999995 9999999999999999999964


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhcc
Q 020224          152 SLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPM  231 (329)
Q Consensus       152 ~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~~~l~~~~~~~~l~~~  231 (329)
                            ..       .+.                       ....+..+.+.+++....++..++++++|.+++..+...
T Consensus        97 ------~~-------~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~iP~l~~~~~l~~  140 (207)
T cd03514          97 ------LL-------EWL-----------------------VARSLFITLLVIAILFGFLWELLNLWFLPALIVGTYLAL  140 (207)
T ss_pred             ------HH-------HHH-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  00       000                       000011111111222223444455566666655433111


Q ss_pred             cccccccccccCCC---Cccccccc-ccchhhccccccccccCCCCCCccCHHHHhHhhHhhhh
Q 020224          232 AGHFISEHYVFNPD---QETYSYYG-PLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQ  291 (329)
Q Consensus       232 ~~h~~~eH~~~~~~---~~t~s~~~-~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~~~  291 (329)
                       ...+.||.+.+++   ..+++..+ +++++++|+|||.|||+||+||+||||++++.+++..+
T Consensus       141 -~~~~~~H~~~~~~~~~~~~~~~~~~l~~~l~~~~nyH~~HHL~P~IP~y~Lp~a~~~~~~~~~  203 (207)
T cd03514         141 -FFDWLPHHPFEETQRWDNSRVYPSKLLNPLIMGQNYHLVHHLWPSIPWYRYPEAYYANKPLLD  203 (207)
T ss_pred             -HheeeCccCCCCccchhhhhcccchhHheeecCCchhHHHhCCCCCchhhhHHHHHHhHHHHh
Confidence             1236788764432   23454444 46999999999999999999999999999999988655

Carotenoids are important natural pigments; zeaxanthin and lutein are the only dietary carotenoids that accumulate in the macular region of the retina and lens. It is proposed that these carotenoids protect ocular tissues against photooxidative damage. CrtR does not show overall amino acid sequence similarity to the beta-carotene hydroxylases similar to CrtZ, an astaxanthin biosynthetic beta-carotene hydroxylase. However, CrtR does show sequence similarity to the green alga, Haematococcus pluvialis, beta-carotene ketolase (CrtW), which converts beta-carotene to canthaxanthin. Sequences of the CrtR_beta-carotene-hydroxylase domain family, as well as, the CrtW_beta-carotene-ketolase domain family appear to be structurally related

>cd03509 DesA_FADS-like Fatty acid desaturase protein family subgroup, a delta-12 acyl-lipid desaturase-like, DesA-like, yet uncharacterized subgroup of membrane fatty acid desaturase proteins found in alpha-, beta-, and gamma-proteobacteria

Probab=99.98  E-value=5.3e-31  Score=242.08  Aligned_cols=212  Identities=19%  Similarity=0.206  Sum_probs=129.9

Q ss_pred             HHHHHHHHHhhccccccCChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCC--CCCCCCCCCChhHH---------H
Q 020224           89 NHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQG--VDGIDMDIPSLTET---------R  157 (329)
Q Consensus        89 ~~~~~~l~He~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~--~~~~Dpd~~~~~~~---------~  157 (329)
                      ....+.++|||+|++++|++++|+++|.++ +.++.|+.. ||..|+.||+++|  ++++|||+......         +
T Consensus        38 ~~~~~~l~Hd~~Hg~~~~~~~~N~~~g~~~-~~l~~p~~~-wr~~H~~HH~~~nl~~~~~Dpd~~~~~~~~~~~~~~~~r  115 (288)
T cd03509          38 AALHSSLQHELLHGHPTRSRWVNEALGYPP-LALWYPYTR-YRDTHLAHHRDEDLTDPGDDPESNYLSPEQWARLPRWQR  115 (288)
T ss_pred             HHHHHHHHHHhhccCcccChHHHHHHHHHH-HHHhcCHHH-HHHHHHHHcCCCCCCCCCCCCccceecHHHHhhCcHHHH
Confidence            445577899999999999999999999764 344588985 9999999999998  55689998653111         1


Q ss_pred             HHH----HHHHHHHHHHHHHHH---HHhhhhccCCCCCcHHHHHHHH----HHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Q 020224          158 MVT----NVVAKSIWVIFQLLF---YAFRPVFLKPKPPGYWEFINFS----IQIALDITIVYFWGWKSFAYLILSTFVGG  226 (329)
Q Consensus       158 ~l~----~~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~g~~~l~~~l~~~~~~~  226 (329)
                      .+.    ..++...   .++.+   ..++.-+....+..+......+    ..++..+.+....|+.+++|++.+.+++.
T Consensus       116 ~~~~~~~~~~~~~l---~gp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~la~  192 (288)
T cd03509         116 ALLRANNTLLGRLI---LGPPLGLIAFARDEFRALRAGDRAALRAWLLHAALLAPLLAWLQLSAGIPWWAYLLAVYYPAL  192 (288)
T ss_pred             HHHHHhhcchhHHh---hhhHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            111    1111111   11111   0111111100011111111111    11111122222335555555544455655


Q ss_pred             hhhcccccccccccccCCCCcccc----cccccchhhccccccccccCCCCCCccCHHHHhHhhHhhhhcCC---CCccH
Q 020224          227 GMHPMAGHFISEHYVFNPDQETYS----YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGLA---SYKSW  299 (329)
Q Consensus       227 ~l~~~~~h~~~eH~~~~~~~~t~s----~~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~~~~~~---~~~sy  299 (329)
                      ++..  .+.+.||.+.. +.+++|    ..+++||+++|+|||.|||++|+||||+||++++.+++.+.+..   +..||
T Consensus       193 ~~~~--~~~~~Eh~~~~-~~~~rs~~~~~~~~~~~l~~ninyH~~HH~~P~vP~y~Lp~~h~~~~~~~~~~~~~~~~~~y  269 (288)
T cd03509         193 SLAK--IRTFLEHRAHE-RPRGRTVINEAGGPLRLLFLNNNLHVVHHDLPTLPWYDLPRLYRARRDAYLRRNGGFVYRGY  269 (288)
T ss_pred             HHHh--hchHhhccCCC-CccCCceeeeCcHHHHHHHhcCCchHhhcCCCCCCcccHHHHHHHhHHHHhhcCCCccCCCH
Confidence            5422  35689998642 223343    24568999999999999999999999999999999988777533   25899


Q ss_pred             HHHHHHHHh
Q 020224          300 SQVIYMYIM  308 (329)
Q Consensus       300 ~~~l~~~v~  308 (329)
                      .++++++..
T Consensus       270 ~~~~~~~~~  278 (288)
T cd03509         270 GELFRRHAW  278 (288)
T ss_pred             HHHHHHHhc
Confidence            999998764

Sequences of this domain family appear to be structurally related to membrane fatty acid desaturases and alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of these sequences also reveals three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.

>COG3239 DesA Fatty acid desaturase [Lipid metabolism]

Probab=99.97  E-value=6.7e-31  Score=247.20  Aligned_cols=228  Identities=18%  Similarity=0.209  Sum_probs=126.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCCC
Q 020224           73 GWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPS  152 (329)
Q Consensus        73 ~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~  152 (329)
                      +|+.. ..++++++++..++++++|||+|++++|++|+||++|.+++.+.+.|+.. ||..|++||++||++|+|||...
T Consensus        60 ~w~~~-~l~~~~~~~~l~~~~~v~Hd~~Hgs~~~~r~iNd~ig~l~~~~~~~p~~~-wR~~H~~HH~~t~~~~~d~~~~~  137 (343)
T COG3239          60 SWWLL-PLALLLAGLLLTGLFSVGHDCGHGSFFKNRWINDLIGHLAAALLLAPPVF-WRISHNQHHAHTNILDDDPETYV  137 (343)
T ss_pred             hHHHH-HHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHhcChhh-hhhhHHHhhcccCCCCCCHHHHH
Confidence            35544 44677777767899999999999999999999999999988888888985 99999999999999988866633


Q ss_pred             hh-H--H--HHHHHHHHHHHHHHHHHHHH---Hhh---hhccCCCCCcHH-HHHHHHHHHHHHHHHHHHhhhH--HHHHH
Q 020224          153 LT-E--T--RMVTNVVAKSIWVIFQLLFY---AFR---PVFLKPKPPGYW-EFINFSIQIALDITIVYFWGWK--SFAYL  218 (329)
Q Consensus       153 ~~-~--~--~~l~~~~~~~~~~~~~~~~~---~~r---~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~~--~l~~~  218 (329)
                      .. +  .  .+....+....+.++.....   .++   ..+.+..+.... ........+.+.+.+....+|.  ..+..
T Consensus       138 ~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~~~p~l~~  217 (343)
T COG3239         138 SYPEQLRRGPLRFQLIRLPWLAFGFGPRWALLHFELLEKLFKRSGKAPKAAALATLLAAIGLAALLALAFFWGLIPLLLV  217 (343)
T ss_pred             hCchhhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhhhccCCcccchHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHHH
Confidence            21 1  1  11111111111111100001   111   111111111111 1111111111111111122221  11111


Q ss_pred             HHHHHHhhhhhcccccccccccccCC-----CCccc-c--cccccchhhccccccccccCCCCCCccCHHHHhHhhHhhh
Q 020224          219 ILSTFVGGGMHPMAGHFISEHYVFNP-----DQETY-S--YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYY  290 (329)
Q Consensus       219 l~~~~~~~~l~~~~~h~~~eH~~~~~-----~~~t~-s--~~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~~  290 (329)
                      .++........+.+ ..+.++...+.     ..+++ +  .+.+++|+++|+|||+|||+||+||||+||++++.+++.+
T Consensus       218 ~~~~~~~~~~~h~~-~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~~l~~n~nyH~~HHl~P~vP~y~lp~~~~~~~~~~  296 (343)
T COG3239         218 GLWLVLVLFVHHTF-DLLPHHGLEDWQWSDRALNARSNVDAPPLLRFLTGNINYHVEHHLFPDVPWYRLPRAHRLIKEAL  296 (343)
T ss_pred             HHHHHHHHHhhccc-ccccccccccchHHHHHHhccCccCchHHHHHhcCCccccHhhhCCCCCchhhHHHHHHHHHHHc
Confidence            11112222211110 01222221111     11323 2  3346899999999999999999999999999999999988


Q ss_pred             hcC--CCCccHHHHH
Q 020224          291 QGL--ASYKSWSQVI  303 (329)
Q Consensus       291 ~~~--~~~~sy~~~l  303 (329)
                      ++.  .+.++|.+..
T Consensus       297 ~~~~~~~~~~y~~~~  311 (343)
T COG3239         297 GERGLTIYTGYREFK  311 (343)
T ss_pred             CcCCchhhhhhhhhh
Confidence            743  3446776654

>PLN03199 delta6-acyl-lipid desaturase-like protein; Provisional

Probab=99.97  E-value=3.7e-30  Score=252.52  Aligned_cols=261  Identities=18%  Similarity=0.249  Sum_probs=150.7

Q ss_pred             hhhCCCCCchHHHHHHHHHHHHHHHH--HhccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHHH-hc
Q 020224           43 ELFGPDPWAFPKVTVVVLLQLYTATL--LHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGIL-AN  119 (329)
Q Consensus        43 ~l~~~~~~~~~~~l~~~~~~~~~a~~--~~~~~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g~l-~~  119 (329)
                      ++|++++......++.+++.++++++  ....++|..+++++++|.. +..++.++||++|+++++++++|+++|.+ +.
T Consensus       125 g~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aillg~~-~~~~g~l~HDa~H~~~~~~~~~N~~~g~~~g~  203 (485)
T PLN03199        125 GMFKSNKMFYAYKCLFNMAIWAAACALVFYSDRFAMHIASALLLGLF-FQQCGWLAHDFLHHQVFKKRKHGDLGGIFWGD  203 (485)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhhCCchHHHHHHHHHHH
Confidence            88999988765544444333333332  2234555556667676665 56666789999999999999999999954 56


Q ss_pred             ccccCccChhhhHhhhhhhcCCCCC-------CCCCCCCChh----H-H---H---H--------HHHH-HHHHHHHHHH
Q 020224          120 LPVGVPMSVTFQKYHLEHHRFQGVD-------GIDMDIPSLT----E-T---R---M--------VTNV-VAKSIWVIFQ  172 (329)
Q Consensus       120 ~~~g~~~~~~wr~~H~~HH~~~~~~-------~~Dpd~~~~~----~-~---~---~--------l~~~-~~~~~~~~~~  172 (329)
                      ++.|.|..+ |+..|+.||++||..       +.|||+....    . .   .   .        +.+. ...+.+.+.+
T Consensus       204 l~~G~S~~w-W~~~Hn~HH~~tN~~~~~~~~~~~DPDI~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Qh~~~~p  282 (485)
T PLN03199        204 LMQGFSMQW-WKNKHNGHHAVPNLHCSSADAQDGDPDIDTMPLLAWSLKQAQSFREINADGKDSGFVKFAIKFQAFFYFP  282 (485)
T ss_pred             hccCCChHH-HHHHHhhhhcCcCcCccccCCCCCCCCCCCCceeeecHHHhhhHhhhhhhccccchhhHHHhhHHHHHHH
Confidence            788999997 999999999999973       5899995321    0 0   0   0        0011 1122221111


Q ss_pred             HHH--------HHhhhhccC-----C------CCCcH---HHHHHHHHHHHHHHHHHH-H--hhh-HHHHHHHHHHHHhh
Q 020224          173 LLF--------YAFRPVFLK-----P------KPPGY---WEFINFSIQIALDITIVY-F--WGW-KSFAYLILSTFVGG  226 (329)
Q Consensus       173 ~~~--------~~~r~~~~~-----~------~~~~~---~~~~~~~~~~~~~~~l~~-~--~g~-~~l~~~l~~~~~~~  226 (329)
                      ++.        .+++..+..     .      ++...   .|...+++++++.+++.. +  .++ ..+.++++..+++.
T Consensus       283 ~l~l~~l~w~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~~~~~~~~g  362 (485)
T PLN03199        283 ILLLARISWLNESFKCAFGLGAASENAALELEAKGLQYPLLEKAGILLHYAWMFTLSSGFGRFSFAYSAFYFFTATASCG  362 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHh
Confidence            111        111111110     0      01101   133333444333322221 2  122 23344444443333


Q ss_pred             h-hhcc--cccccccccccCC--C----C--cccccc-------cccchhhccccccccccCCCCCCccCHHHHhHhhHh
Q 020224          227 G-MHPM--AGHFISEHYVFNP--D----Q--ETYSYY-------GPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPE  288 (329)
Q Consensus       227 ~-l~~~--~~h~~~eH~~~~~--~----~--~t~s~~-------~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~  288 (329)
                      . +...  .+|...+-...+.  +    |  .|+++.       .+++|+++++|||+||||||+||++|||++.+++++
T Consensus       363 ~~l~~~f~l~H~~~~~~~~~~~~d~~~~Qv~TT~n~~~~~~~~s~~~~wf~GGLN~QIEHHLFP~mp~~~y~~i~piVk~  442 (485)
T PLN03199        363 FFLAIVFGLGHNGMATYDADARPDFWKLQVTTTRNIIGGHGFPQAFVDWFCGGLQYQVDHHLFPMLPRHNIAKCHALVES  442 (485)
T ss_pred             hHheEEEecCCccccccCCCCCccHHHHHHHhccCccCCCCCcchHHHHHhccchhhhhhhcCCCCchhhHHhhhHHHHH
Confidence            2 2111  1333222111011  1    2  344442       368999999999999999999999999999999999


Q ss_pred             hhh--cCCCC-ccHHHHHHH
Q 020224          289 YYQ--GLASY-KSWSQVIYM  305 (329)
Q Consensus       289 ~~~--~~~~~-~sy~~~l~~  305 (329)
                      +|+  ++||. .++++.++.
T Consensus       443 ~C~k~glpY~~~~~~~a~~~  462 (485)
T PLN03199        443 FCKEWGVKYHEADLVDGTME  462 (485)
T ss_pred             HHHHhCCCccccCHHHHHHH
Confidence            999  57886 456665544

>PLN02505 omega-6 fatty acid desaturase

Probab=99.97  E-value=8.6e-30  Score=240.91  Aligned_cols=272  Identities=14%  Similarity=0.100  Sum_probs=162.1

Q ss_pred             HHHHHHHhhChHHhhhhCCCCCchHHHHHHHHHHHHHHHHHh-----c-cch---HHHHHHHHHHHHHHHHHHHHHHHhh
Q 020224           29 SRRRQILSQYPQIKELFGPDPWAFPKVTVVVLLQLYTATLLH-----D-AGW---LKILATAYFFGSFLNHNLFLAIHEL   99 (329)
Q Consensus        29 ~r~~~i~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~a~~~~-----~-~~w---~~~~~~~~~l~~~~~~~~~~l~He~   99 (329)
                      .+.++|.++.|  +++|++|+++++..++.+++.+++++++.     . ..+   .++.+ .+++.|.++.++++++|||
T Consensus        31 ~tl~~ir~aiP--~~~f~~s~~rs~~~v~~d~~~i~~~~~~a~~~~~~~p~~~~~~l~~~-~~~~~G~~~~~l~vl~HDc  107 (381)
T PLN02505         31 FTLGDIKKAIP--PHCFKRSVLRSFSYLVYDLLIAALLYYVATNYIPLLPGPLSYVAWPL-YWAAQGCVLTGVWVIAHEC  107 (381)
T ss_pred             ccHHHHHHhCC--HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHH-HHHHHHHHHHHHHHHHHhh
Confidence            47789999999  89999999999888777755444333211     1 111   11112 2344455578999999999


Q ss_pred             ccccccCChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCCChh-HH-----HHHHHHHHHHHH----H
Q 020224          100 SHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLT-ET-----RMVTNVVAKSIW----V  169 (329)
Q Consensus       100 ~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~~~-~~-----~~l~~~~~~~~~----~  169 (329)
                      +|+++++++++|+++|.+++.+++.|+.. ||..|+.||++||+.++|++..+.. +.     ++.+..+.+...    .
T Consensus       108 gH~s~~~~~~lN~~vG~i~~~~ll~p~~~-Wr~~H~~HH~~tn~~~~D~~~~P~~~~~~~~~~~~~~~p~~~~~~~~~~~  186 (381)
T PLN02505        108 GHHAFSDYQWLDDTVGLVLHSALLVPYFS-WKYSHRRHHSNTGSLERDEVFVPKKKSALPWYSKYLNNPPGRLLHIVVQL  186 (381)
T ss_pred             cchhhhCChHHHHHHHHHHHHHHcCCHHH-HHHHHHHHhhccCCCCCCccccCcCHHHHhHHHHHhcChHHHHHHHHHHH
Confidence            99999999999999998877788999995 9999999999999999999864321 11     111222111111    1


Q ss_pred             HHH-HHHHHh----hh------hccCCC----CCcHHHH-HHHHHHHHHHHHHH---HHhhhHH-HHHHHHHHHHhhhhh
Q 020224          170 IFQ-LLFYAF----RP------VFLKPK----PPGYWEF-INFSIQIALDITIV---YFWGWKS-FAYLILSTFVGGGMH  229 (329)
Q Consensus       170 ~~~-~~~~~~----r~------~~~~~~----~~~~~~~-~~~~~~~~~~~~l~---~~~g~~~-l~~~l~~~~~~~~l~  229 (329)
                      .++ +++...    ++      -+....    ++.+..+ ...++.+++.+++.   ...|+.. +.++++|.++...+.
T Consensus       187 ~~G~p~yl~~~~~g~~~~~~~~hf~p~s~lf~~~er~~v~~S~~~i~~~~~~l~~~~~~~G~~~~l~~y~vP~lv~~~wl  266 (381)
T PLN02505        187 TLGWPLYLAFNVSGRPYDRFACHFDPYSPIFNDRERLQIYISDAGILAVSFGLYRLAAAKGLAWVLCVYGVPLLIVNAFL  266 (381)
T ss_pred             HhHHHHHHHhhhcCCCCCcccccCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence            111 222111    01      011110    1112221 11222222222222   2346533 445566666555442


Q ss_pred             cccccccccccc------------cCCCC-cc--cccccccchhhcccc-ccccccCCCCCCccCHHHHhHhhHhhhhcC
Q 020224          230 PMAGHFISEHYV------------FNPDQ-ET--YSYYGPLNFLTWHVG-YHNEHHDFPRIPGNKLHKVREVAPEYYQGL  293 (329)
Q Consensus       230 ~~~~h~~~eH~~------------~~~~~-~t--~s~~~~~~~l~~n~~-yH~eHHlfP~vP~~~Lp~l~~~~~~~~~~~  293 (329)
                      ..  -++.||..            +.+++ .|  +++ ++++++++||+ +|+.||++|+||+|||+++++.+++.+.+.
T Consensus       267 v~--itylqHt~~~ip~~~~~~W~~~rgAl~tvdr~y-g~~~~l~h~I~~~Hv~HHl~srIP~Y~l~eA~~aik~~lg~~  343 (381)
T PLN02505        267 VL--ITYLQHTHPALPHYDSSEWDWLRGALATVDRDY-GILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEY  343 (381)
T ss_pred             HH--HHHHhccCCCCCccCCCCcChhhccceeccCcc-hHHHHHHccCCcccchhhccCCCCCCCHHHHHHHHHHHhHHH
Confidence            11  12333322            11222 34  443 78999999997 999999999999999999999887755532


Q ss_pred             CC--CccHHHHHHHHH
Q 020224          294 AS--YKSWSQVIYMYI  307 (329)
Q Consensus       294 ~~--~~sy~~~l~~~v  307 (329)
                      -.  .+..++.+++..
T Consensus       344 y~~~~~~~~~~l~~~~  359 (381)
T PLN02505        344 YQFDGTPVYKALWREA  359 (381)
T ss_pred             hcCCCCcHHHHHHHHh
Confidence            11  133455555543

>cd03510 Rhizobitoxine-FADS-like This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins

Probab=99.97  E-value=2.4e-30  Score=221.59  Aligned_cols=155  Identities=26%  Similarity=0.411  Sum_probs=111.7

Q ss_pred             HHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHH-HhcccccCccChhhhHhhhhhhcCCCCCC
Q 020224           67 TLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGI-LANLPVGVPMSVTFQKYHLEHHRFQGVDG  145 (329)
Q Consensus        67 ~~~~~~~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g~-l~~~~~g~~~~~~wr~~H~~HH~~~~~~~  145 (329)
                      .+....+|++++++++++|+. +.++++++|||+|++++|++++|+++|. ++++++|.|+.. ||..|+.||+++|++ 
T Consensus        11 ~~~~~~~~~~~~l~~~~~g~~-~~~l~~l~Hea~H~~l~~~~~~N~~~g~~~~~~p~~~~~~~-~r~~H~~HH~~~~~~-   87 (175)
T cd03510          11 LALAWPNWLAYLLAVLLIGAR-QRALAILMHDAAHGLLFRNRRLNDFLGNWLAAVPIFQSLAA-YRRSHLKHHRHLGTE-   87 (175)
T ss_pred             HHHHhccHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcccccccHHHHHHHHHHHhhhhCCHHH-HHHHHHHHhCccCCC-
Confidence            334456787777766666655 8899999999999999999999999994 577899999995 999999999999995 


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Q 020224          146 IDMDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVG  225 (329)
Q Consensus       146 ~Dpd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~~~l~~~~~~  225 (329)
                      +|||..                                                             ..+.++++|.+++
T Consensus        88 ~Dpd~~-------------------------------------------------------------~~~~~W~~P~~~~  106 (175)
T cd03510          88 DDPDLA-------------------------------------------------------------LYLLLWLVPLLTV  106 (175)
T ss_pred             CCCcHH-------------------------------------------------------------HHHHHHHHHHHHH
Confidence            899963                                                             0001112222221


Q ss_pred             hhhhcccccccccccccCCC-----Cccccc-cccc-chhh--ccccccccccCCCCCCccCHHHHhHhh
Q 020224          226 GGMHPMAGHFISEHYVFNPD-----QETYSY-YGPL-NFLT--WHVGYHNEHHDFPRIPGNKLHKVREVA  286 (329)
Q Consensus       226 ~~l~~~~~h~~~eH~~~~~~-----~~t~s~-~~~~-~~l~--~n~~yH~eHHlfP~vP~~~Lp~l~~~~  286 (329)
                      .... ...+.++||.+.+.+     ++|||. .+++ +++.  .|+|||.|||++|+|||++||++|+.+
T Consensus       107 ~~~~-~~~~~~~eH~~~~~~~~~~~~~tr~~~~~~~~r~l~~p~~~~YH~eHHl~P~vP~~~Lp~~h~~l  175 (175)
T cd03510         107 FPLI-GRIREIAEHAGVPADEDPDARNTRTTFGGWIERLLFAPHNINYHLEHHLFPAVPFYNLPKAHRIL  175 (175)
T ss_pred             HHHH-HHHHHHHhccCCCCCCcchhhcCccccccHHHHHHHcccCCcHHHHHhCCcCCchhhHHHHHHhC
Confidence            1100 001246888875542     466663 3454 4554  699999999999999999999999863

Dihydrorhizobitoxine desaturase is reported to be involved in the final step of rhizobitoxine biosynthesis. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXX(X)HH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.

>cd03513 CrtW_beta-carotene-ketolase Beta-carotene ketolase/oxygenase (CrtW, also known as CrtO), the carotenoid astaxanthin biosynthetic enzyme, initially catalyzes the addition of two keto groups to carbons C4 and C4' of beta-carotene

Probab=99.96  E-value=2.5e-28  Score=215.93  Aligned_cols=189  Identities=23%  Similarity=0.293  Sum_probs=120.4

Q ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-CChhhHHHHHHHh-cccccCccChhhhHhhhhhhcCCCCCCCC
Q 020224           70 HDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAF-STPAYNRWLGILA-NLPVGVPMSVTFQKYHLEHHRFQGVDGID  147 (329)
Q Consensus        70 ~~~~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~-~~~~~N~~~g~l~-~~~~g~~~~~~wr~~H~~HH~~~~~~~~D  147 (329)
                      .+.+|+.++++++++.+.++.++++++|||+|++++ +++++|+++|.++ .++.|.|+.. |+..|..||+++|++ +|
T Consensus        24 ~~~~~~~~~~~~~~~~g~l~~glfi~~HDa~Hg~~~~~~~~~N~~iG~~~~~l~~g~~~~~-~~~~H~~HH~~~~~~-~D  101 (225)
T cd03513          24 RGSISLLLIAAVVLLQTFLHTGLFIIAHDAMHGSLAPGNPRLNRAIGRLCLFLYAGFSYDR-LLRKHHLHHRHPGTA-KD  101 (225)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCchHHHHHHHHHHHHhhcCCHHH-HHHHHHHHcCCCCCC-CC
Confidence            344555555566777788789999999999999999 7999999999776 5778999995 999999999999999 99


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcHHHHHHHHHHHHHHHHHHHHh--hh-HHHHHHHHHHHH
Q 020224          148 MDIPSLTETRMVTNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFW--GW-KSFAYLILSTFV  224 (329)
Q Consensus       148 pd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~-~~l~~~l~~~~~  224 (329)
                      ||.........+..+     ..++.      +.        .++...  +...+++.++....  +. ..+.++++|.++
T Consensus       102 pD~~~~~~~~~~~wy-----~~f~~------~y--------~~~~ql--i~l~ivw~~~l~~~~~~~~~~~~~~~~P~l~  160 (225)
T cd03513         102 PDFHKGNPSGFLPWY-----LHFMS------NY--------FGWRQL--AILAAVWLLLLGLGSAPLANLLLFWALPLIL  160 (225)
T ss_pred             CCCCCCCCCChHHHH-----HHHHH------hH--------hHHHHH--HHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence            999764211211100     01110      00        012222  11111111222222  22 455666677665


Q ss_pred             hhhhhcccccccccccc----cCCCCccccc--ccccchh-hccccccccccCCCCCCccCHHHH
Q 020224          225 GGGMHPMAGHFISEHYV----FNPDQETYSY--YGPLNFL-TWHVGYHNEHHDFPRIPGNKLHKV  282 (329)
Q Consensus       225 ~~~l~~~~~h~~~eH~~----~~~~~~t~s~--~~~~~~l-~~n~~yH~eHHlfP~vP~~~Lp~l  282 (329)
                      +......++ .+..|..    .++.++++|.  +++++++ |+|+|||.|||+||+||||+||++
T Consensus       161 ~~~~l~~f~-T~lpH~~~~~~~~~~~~a~~~~~~~~~~~l~c~~fgyH~eHH~fP~~Pw~~Lp~~  224 (225)
T cd03513         161 SSLQLFYFG-TWLPHRPGRGGFADRHRARSSRLSPVLSFLTCYHFGYHHEHHLSPSTPWWRLPEL  224 (225)
T ss_pred             HHHHHHHHH-hhcCCCCCCCCCCCcccceecCccHHHHHHHHHhcCcchhhccCCCCCcccCccc
Confidence            544311111 1223332    1222456663  4668886 589999999999999999999987

Carotenoids are important natural pigments produced by many microorganisms and plants. Astaxanthin is reported to be an antioxidant, an anti-cancer agent, and an immune system stimulant. A number of bacteria and green algae can convert beta-carotene into astaxanthin by using several ketocarotenoids as intermediates and CrtW and a beta-carotene hydroxylase (CrtZ). CrtW initially converts beta-carotene to canthaxanthin via echinenone, and CrtZ initially mediates the conversion of beta-carotene to zeaxanthin via beta-cryptoxanthin. After a few more intermediates are formed, CrtW and CrtZ act in combination to produce astaxanthin. Sequences of this domain family appear to be structurally related to membrane fatty acid desaturases and alkane hydroxylases. Th

>cd03506 Delta6-FADS-like The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria

Probab=99.95  E-value=4.9e-28  Score=212.83  Aligned_cols=183  Identities=22%  Similarity=0.302  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCCChhHHHHH
Q 020224           80 TAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLTETRMV  159 (329)
Q Consensus        80 ~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~~~~~~~l  159 (329)
                      +++++|.. ....+.++|||+|+++++++++|+++|.+++.++|.|+.+ |+..|+.||++||++++|||+........ 
T Consensus         3 ~ai~~g~~-~~~~~~~~Hd~~H~~~~~~~~~n~~~g~~~~~~~g~s~~~-w~~~H~~HH~~tn~~~~Dpd~~~~~~~~~-   79 (204)
T cd03506           3 LAILLGLF-WAQGGFLAHDAGHGQVFKNRWLNKLLGLTVGNLLGASAGW-WKNKHNVHHAYTNILGHDPDIDTLPLLAR-   79 (204)
T ss_pred             HHHHHHHH-HHHHHHHHHhccCccccCCchHHHHHHHHHHhccCCCHHH-HHHHHhhhcCcCCCCCCCCCCCcCceEEe-
Confidence            35555555 4577788999999999999999999998887799999996 99999999999999999999865210000 


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhccCCCCCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhhhcccccccccc
Q 020224          160 TNVVAKSIWVIFQLLFYAFRPVFLKPKPPGYWEFINFSIQIALDITIVYFWGWKSFAYLILSTFVGGGMHPMAGHFISEH  239 (329)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~~~l~~~~~~~~l~~~~~h~~~eH  239 (329)
                      ..                  .....+ +..++...   .+..++..++.+.    +..++++.+++..+...  .+..+|
T Consensus        80 ~~------------------~~~~~~-~~~~~~~~---~q~~~~~~~~~~~----~~~~~~~~~~~~~~l~~--~~~~~H  131 (204)
T cd03506          80 SE------------------PAFGKD-QKKRFLHR---YQHFYFFPLLALL----LLAFLVVQLAGGLWLAV--VFQLNH  131 (204)
T ss_pred             cc------------------cccccc-hHHHHHHH---HHHHHHHHHHHHH----HHHHHHHHHHHhhhhhe--Eeeccc
Confidence            00                  000000 00011111   1111111111110    12223343333322111  122333


Q ss_pred             cccC---------CC----C--ccccc--ccccchhhccccccccccCCCCCCccCHHHHhHhhHhhhhcC
Q 020224          240 YVFN---------PD----Q--ETYSY--YGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQGL  293 (329)
Q Consensus       240 ~~~~---------~~----~--~t~s~--~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~~~~~  293 (329)
                      ...+         .+    |  .|+++  +.+++|+++|+|||+|||+||+||+++||++++++++.|++.
T Consensus       132 ~~~~~~~~~~~~~~~w~~~q~~tt~~~~~~~~~~~l~ggln~qieHHLfP~ip~~~l~~~~~~v~~~~~~~  202 (204)
T cd03506         132 FGMPVEDPPGESKNDWLERQVLTTRNITGSPFLDWLHGGLNYQIEHHLFPTMPRHNYPKVAPLVRELCKKH  202 (204)
T ss_pred             ccccccCCCCCcccCHHHHHHhCcccCCCCCHHHHHhcchhhHHHHhcCCCchhhhHHHHHHHHHHHHHHh
Confidence            2111         01    1  23332  456999999999999999999999999999999999999863

These desaturases are required for the synthesis of highly unsaturated fatty acids (HUFAs), which are mainly esterified into phospholipids and contribute to maintaining membrane fluidity. While HUFAs may be required for cold tolerance in bacteria, plants and fish, the primary role of HUFAs in mammals is cell signaling. These enzymes are described as front-end desaturases because they introduce a double bond between the pre-exiting double bond and the carboxyl (front) end of the fatty acid. Various substrates are involved, with both acyl-coenzyme A (CoA) and acyl-lipid desaturases present in this CD. Acyl-lipid desaturases are localized in the membranes of cyanobacterial thylakoid, plant endoplasmic reticulum (ER), and plastid; an

>PF00487 FA_desaturase: Fatty acid desaturase This entry is only a subset of the Pfam family

Probab=99.95  E-value=5.5e-28  Score=216.71  Aligned_cols=211  Identities=23%  Similarity=0.349  Sum_probs=121.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCCChh--HH
Q 020224           79 ATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLT--ET  156 (329)
Q Consensus        79 ~~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~~~--~~  156 (329)
                      ++++++.+..+..++.++||++|+++++++++|+++|.+++.+++.|+.. ||..|+.||+++|++++|||.....  ..
T Consensus         7 ~~~~~~~~~~~~~~~~~~H~~~H~~~~~~~~~n~~l~~~~~~~~~~~~~~-wr~~H~~HH~~~~~~~~Dpd~~~~~~~~~   85 (257)
T PF00487_consen    7 LLALLLLGLSFARLFGLAHDAGHGAFFRSRWLNDLLGRLLGLPIGGPYSS-WRISHNRHHHYTNNPDRDPDSWTRRLPPH   85 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCcccChHHHHHHHHHHHHhcCCHhH-hheeeeccccccCCccccCccchhhhhhh
Confidence            34555556657888889999999999999999999999888889999985 9999999999999998899987640  00


Q ss_pred             HHHHHH--HHHHHHH-HHHHHH---HHh---hhhccCCCCCc-HH-HHHH---HHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 020224          157 RMVTNV--VAKSIWV-IFQLLF---YAF---RPVFLKPKPPG-YW-EFIN---FSIQIALDITIVYFWGWKSFAYLILST  222 (329)
Q Consensus       157 ~~l~~~--~~~~~~~-~~~~~~---~~~---r~~~~~~~~~~-~~-~~~~---~~~~~~~~~~l~~~~g~~~l~~~l~~~  222 (329)
                      ......  ....... ......   ...   +.......+.. .. ....   .++.+++.+++....++..++.++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (257)
T PF00487_consen   86 QPWRPLFSYRRFLFRFLLSLFFPIWYFIFFFRKRRMRRRRKRPRRYLILAALLLALLLALLAALFFFSPWWALLLFLLPF  165 (257)
T ss_pred             hhhhhhhhhhhccccccccccccchhhhhhccccccccccccchhHHHHHHHhhhhhhhhhhhhcccccccchhHHHHHH
Confidence            000000  0110000 000000   000   00000000111 00 0111   111111111112122233333333444


Q ss_pred             HHhhhhhcccccccccccccCC--C--Cc---------ccc--cccccchhhccccccccccCCCCCCccCHHHHhHhhH
Q 020224          223 FVGGGMHPMAGHFISEHYVFNP--D--QE---------TYS--YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAP  287 (329)
Q Consensus       223 ~~~~~l~~~~~h~~~eH~~~~~--~--~~---------t~s--~~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~  287 (329)
                      .++..+....  .+.||.+.+.  .  ..         +.+  ...+++++++|+|||+|||+||+||+++||++++.++
T Consensus       166 ~~~~~~~~~~--~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~HHl~P~vp~~~l~~~~~~~~  243 (257)
T PF00487_consen  166 LIGSFFLAFV--TYLEHYGLDPDDNEDTRDFYYRQLPGSSNVHNSWWLNWLTGGLNYHIEHHLFPGVPWYNLPEAHPILK  243 (257)
T ss_pred             hHHHHHHHHh--hHHhhhcccccccccccceecccccccccccCchhhhccccCCCChHHhCCCCCcCHHHHHHHHHHHH
Confidence            4433331111  2566776421  1  00         011  2345799999999999999999999999999999999


Q ss_pred             hhhhc
Q 020224          288 EYYQG  292 (329)
Q Consensus       288 ~~~~~  292 (329)
                      +.|++
T Consensus       244 ~~~~~  248 (257)
T PF00487_consen  244 EVCPE  248 (257)
T ss_pred             HHHHH
Confidence            98884

; InterPro: IPR005804 Fatty acid desaturases are enzymes that catalyse the insertion of a double bond at the delta position of fatty acids. There seem to be two distinct families of fatty acid desaturases which do not seem to be evolutionary related. Family 1 is composed of: Stearoyl-CoA desaturase (SCD) (1.14.19.1 from EC) []. Family 2 is composed of: Bacterial fatty acid desaturases. Plant stearoyl-acyl-carrier-protein desaturase (1.14.19.1 from EC) [], this enzyme catalyzes the introduction of a double bond at the delta(9) position of steraoyl-ACP to produce oleoyl-ACP. This enzyme is responsible for the conversion of saturated fatty acids to unsaturated fatty acids in the synthesis of vegetable oils. Cyanobacterial DesA [], an enzyme that can introduce a second cis double bond at the delta(12) position of fatty acid bound to membranes glycerolipids. DesA is involved in chilling tolerance; the phase transition temperature of lipids of cellular membranes being dependent on the degree of unsaturation of fatty acids of the membrane lipids. This entry contains fatty acid desaturases belonging to Family 1. ; GO: 0006629 lipid metabolic process

>cd03507 Delta12-FADS-like The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of organisms including higher plants, green algae, diatoms, nematodes, fungi, and bacteria

Probab=99.94  E-value=4e-26  Score=202.89  Aligned_cols=101  Identities=18%  Similarity=0.148  Sum_probs=76.3

Q ss_pred             chHHHHHHHHHHHHHHHHH--hccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHHHhcccccCccCh
Q 020224           51 AFPKVTVVVLLQLYTATLL--HDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSV  128 (329)
Q Consensus        51 ~~~~~l~~~~~~~~~a~~~--~~~~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~  128 (329)
                      +++..++..++..++++..  ...+|+..++ +.++.+.++.++++++|||+|+++++++++|+++|.+++.+++.|+..
T Consensus         5 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~l~~l~He~~H~~~~~~~~~N~~~g~~~~~~~~~p~~~   83 (222)
T cd03507           5 RSLSYLAPDILLLALLALAASLLLSWWLWPL-YWIVQGLFLTGLFVLGHDCGHGSFSDNRRLNDIVGHILHSPLLVPYHS   83 (222)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHHHHHHHHHhhccCCcccccchhHHHHHHHHHHHHHhCChHH
Confidence            3444444444333333322  3356665545 444555557899999999999999999999999999888999999995


Q ss_pred             hhhHhhhhhhcCCCCCCCCCCCCCh
Q 020224          129 TFQKYHLEHHRFQGVDGIDMDIPSL  153 (329)
Q Consensus       129 ~wr~~H~~HH~~~~~~~~Dpd~~~~  153 (329)
                       ||..|+.||+++|+.++|+|..+.
T Consensus        84 -w~~~H~~HH~~~~~~~~D~~~~p~  107 (222)
T cd03507          84 -WRISHNRHHAHTGNLEGDEVWVPV  107 (222)
T ss_pred             -HHHHHHHHHhccCCCCCCCcccCc
Confidence             999999999999999899998653

The expression of these proteins appears to be temperature dependent: decreases in temperature result in increased levels of fatty acid desaturation within membrane lipids subsequently altering cell membrane fluidity. An important enzyme for the production of polyunsaturates in plants is the oleate delta-12 desaturase (Arabidopsis FAD2) of the endoplasmic reticulum. This enzyme accepts l-acyl-2-oleoyl-sn-glycero-3-phosphocholine as substrate and requires NADH:cytochrome b oxidoreductase, cytochrome b, and oxygen for activity. FAD2 converts oleate(18:1) to linoleate (18:2) and is closely related to oleate 12-hydroxylase which cat

>KOG4232 consensus Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase [Lipid transport and metabolism]

Probab=99.93  E-value=1.5e-24  Score=201.51  Aligned_cols=257  Identities=19%  Similarity=0.184  Sum_probs=150.5

Q ss_pred             hhhhCCCCCchHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHH-HHhcc
Q 020224           42 KELFGPDPWAFPKVTVVVLLQLYTATLLHDAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLG-ILANL  120 (329)
Q Consensus        42 ~~l~~~~~~~~~~~l~~~~~~~~~a~~~~~~~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g-~l~~~  120 (329)
                      +++++.++.+++..++.+++.+++++.+...   ..++++++++. .++..+.++||.+|.+++|++++|+++. ++++.
T Consensus       111 ~gl~~~~~~ffl~~~l~~i~~~~~a~~~i~~---~~l~~a~Ll~~-a~~Qs~~l~Hd~gH~~i~~~~~wN~~~~~fv~n~  186 (430)
T KOG4232|consen  111 MGLMDLNKTFFLHLLLLIILYLVLAWLLIYL---LSLISAVLLGL-AWAQSGWLQHDYGHLSIFKNSKWNHLAQKFVGNH  186 (430)
T ss_pred             cCCCcchHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH-HHHHHHHHhcccccccccccccHHHHHHHHHhhh
Confidence            4678888877776666666555555544321   13455555544 4777778899999999999999999999 56789


Q ss_pred             cccCccChhhhHhhhhhhcCCCCCCCCCCCCChh----------HHHHHHHH---HH-------HHHHHHHHHHH-----
Q 020224          121 PVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPSLT----------ETRMVTNV---VA-------KSIWVIFQLLF-----  175 (329)
Q Consensus       121 ~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~~~----------~~~~l~~~---~~-------~~~~~~~~~~~-----  175 (329)
                      +.|.|..| |+..|+.||+++|..++|||+....          +....++.   ..       ...+.++...+     
T Consensus       187 L~G~sa~W-W~~~H~~HHa~pN~~~~DpDi~~~P~fl~g~~~~~~~~k~krk~~~~~~qh~yf~~~~~p~l~~~~~~~~~  265 (430)
T KOG4232|consen  187 LKGFSAAW-WKSHHNQHHAAPNSLDKDPDIDFEPAFLLGDPNSHEYGKKKRKYTPYPEQHLYFFLIGPPFLRLMWFQQSI  265 (430)
T ss_pred             cccccHHH-HHHHHhhhhccCccCCCCccccccchhhhCCCchhhhcccceeEeecccceEEEEeccchHHHHHHHHHHH
Confidence            99999997 9999999999999999999995511          11000000   00       00001111100     


Q ss_pred             -HHhh--hhccCCCC-CcHHHHHHHHHHHHHH-HHHHHHhhhHH-HHHHHHHHHHhhhhhcccccccccccccCC-----
Q 020224          176 -YAFR--PVFLKPKP-PGYWEFINFSIQIALD-ITIVYFWGWKS-FAYLILSTFVGGGMHPMAGHFISEHYVFNP-----  244 (329)
Q Consensus       176 -~~~r--~~~~~~~~-~~~~~~~~~~~~~~~~-~~l~~~~g~~~-l~~~l~~~~~~~~l~~~~~h~~~eH~~~~~-----  244 (329)
                       +...  ..+..... .+.++...+....... .++..+.+|.. +.+.....+++.+    +.|...|-+...+     
T Consensus       266 ~~~~~~~~~w~Dl~~~~~~~~~~~i~~~~~~~~~~~~~L~~w~~r~~~~~~s~~v~l~----~nH~~~~i~~~~~i~~dw  341 (430)
T KOG4232|consen  266 IFVQTNLLLWYDLYWPDRFYLRAFIYLHWGWGLLLLSCLPNWPIRFLFSSWSFWVTLT----MNHIDPEIYHEGDIRRDW  341 (430)
T ss_pred             HHHHhHHHHHHHhhhhhhHHHhhHHHhcchhhhHHHHhccCchHHHHHHHHHHHHHHh----hhccchhhccCCcchhhH
Confidence             0000  01111001 1112222222222221 22222334532 2222222223211    2333232221111     


Q ss_pred             --CC--cccc--cccccchhhccccccccccCCCCCCccCHHHHhHhhHhhhh--cCCCC-ccHHHHHHHHH
Q 020224          245 --DQ--ETYS--YYGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEYYQ--GLASY-KSWSQVIYMYI  307 (329)
Q Consensus       245 --~~--~t~s--~~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~~~--~~~~~-~sy~~~l~~~v  307 (329)
                        .|  .|++  ...+++|+.+++|+|+||||||+||+.||+++.+.++|+|+  ++||. +.|++.+.+-+
T Consensus       342 ~~~Q~~tT~n~~~~~f~dwl~ghln~qieHHLFPtmpr~nL~~v~P~Vke~c~k~~l~y~~~~~~~~~~~~~  413 (430)
T KOG4232|consen  342 FSLQLATTINVGPSKFSDWLSGHLNFQIEHHLFPTMPRHNLNKVAPLVKELCKKHGLPYREKPHFEALGDII  413 (430)
T ss_pred             HHHHHhhccccCchhHHHHHHhhhhhhHHhhcCCCCCccchHHHHHHHHHHHHHcCCccccchHHHHHHHHH
Confidence              12  3333  23568999999999999999999999999999999999999  57775 67777765544

>cd03512 Alkane-hydroxylase Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases

Probab=99.87  E-value=2e-21  Score=180.88  Aligned_cols=222  Identities=20%  Similarity=0.254  Sum_probs=132.0

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHhhccccccCChhhHHHHHHHhcccccCccChhhhHhh-hhhhcCCCCCCCCCC
Q 020224           71 DAGWLKILATAYFFGSFLNHNLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYH-LEHHRFQGVDGIDMD  149 (329)
Q Consensus        71 ~~~w~~~~~~~~~l~~~~~~~~~~l~He~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H-~~HH~~~~~~~~Dpd  149 (329)
                      ..+|+..+..++.+|..........+||++|    |++++|+++|.++..+.  ++.. |+..| ..||++++++ +|||
T Consensus        66 ~~~~~~~~~~~~~~G~~~g~i~~~~aHel~H----r~~~lnr~lg~~~~~~~--~~~~-~~~~H~~~HH~~v~tp-~DP~  137 (314)
T cd03512          66 DLSALEKVGLILSLGLLSGVIGINTAHELIH----RRSRLERWLGKLLLASL--LYGH-FAIEHVRGHHRYVATP-EDPA  137 (314)
T ss_pred             CCcHHHHHHHHHHHHHHHHHhhHHHHHhccC----CCChHHHHHHHHHHHHh--cccc-eeeeecccCCCCCCCC-CCcc
Confidence            5667765554444443322223445677777    77999999997655444  4553 88888 5899999998 8999


Q ss_pred             CCChhHH---HHHHHHHHHHHHHHHHHHHHHhhhhccC-CCCC--cHHH-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 020224          150 IPSLTET---RMVTNVVAKSIWVIFQLLFYAFRPVFLK-PKPP--GYWE-FINFSIQIALDITIVYFWGWKSFAYLILST  222 (329)
Q Consensus       150 ~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~--~~~~-~~~~~~~~~~~~~l~~~~g~~~l~~~l~~~  222 (329)
                      .....|.   .+++...+.     +...+..-.....+ .++.  .+-+ +..+++.+++.++++++.||..+.+++++.
T Consensus       138 tar~ge~~y~f~~r~~~g~-----~~~aw~~e~~rl~~~g~~~~~~~n~~l~~~~~~~a~~~~~~~~~g~~~l~~~l~~~  212 (314)
T cd03512         138 TARRGESFYRFLPRALVGS-----FRSAWKLEKKRLRRKGRSPWSPRNEVLRYLALAVALLALAAALGGLAGLLFLLIQA  212 (314)
T ss_pred             ccccCccHHHHHHHHHHHH-----HHHHHHHHHHHHHhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8653322   112222211     11111100111111 1111  1112 223445555556666677888888888888


Q ss_pred             HHhhhhhcccccccccccccCCCC--c----------cccc-ccccchhhccccccccccCCCCCCccCHHHHhHhhHhh
Q 020224          223 FVGGGMHPMAGHFISEHYVFNPDQ--E----------TYSY-YGPLNFLTWHVGYHNEHHDFPRIPGNKLHKVREVAPEY  289 (329)
Q Consensus       223 ~~~~~l~~~~~h~~~eH~~~~~~~--~----------t~s~-~~~~~~l~~n~~yH~eHHlfP~vP~~~Lp~l~~~~~~~  289 (329)
                      +++.++.  ..-++.||+|+.+..  +          +.+. ....|++++|++||.+||.+|++|++.|+..++.    
T Consensus       213 ~~g~~~l--~~~nY~EHyGL~r~~~~~gr~e~~~~~hSWNs~~~~~n~l~~nl~rHsdHH~~p~~~y~~L~~~~~~----  286 (314)
T cd03512         213 FYAKSLL--ELVNYIEHYGLLRKKLANGRYEPVGPRHSWNSNHIVSNLLLFNLQRHSDHHAHPTRPYQALRPFPEA----  286 (314)
T ss_pred             HHHHHHH--HHHHHHHhcCCccccCCCCccccCCCccCcCcCcHHHHHHHHhcchhhhhccCCCCchhhccCCccC----
Confidence            8877552  223689999975431  1          1111 2357999999999999999999999999988653    


Q ss_pred             hhcCCCC------ccHHHHHHHHHhCCCC
Q 020224          290 YQGLASY------KSWSQVIYMYIMDRTV  312 (329)
Q Consensus       290 ~~~~~~~------~sy~~~l~~~v~~~~~  312 (329)
                       +++|..      -++...+|.-++||++
T Consensus       287 -p~lP~~y~~m~~~al~P~lw~~~m~~r~  314 (314)
T cd03512         287 -PQLPSGYPVMALLALIPPLWRRVMDPRV  314 (314)
T ss_pred             -CCCCccHHHHHHHHHhhHHHHHhhccCC
Confidence             223311      2345556777778754

The alk genes in Pseudomonas oleovorans encode conversion of alkanes to acyl CoA. The alkane omega-hydroxylase (AlkB) system is responsible for the initial oxidation of inactivated alkanes. It is a three-component system comprising a soluble NADH-rubredoxin reductase (AlkT), a soluble rubredoxin (AlkG), and the integral membrane oxygenase (AlkB). AlkB utilizes the oxygen rebound mechanism to hydroxylate alkanes. This mechanism involves homolytic cleavage of the C-H bond by an electrophilic metal-oxo intermediate to generate a substrate-based radical. As with other members of this superfamily, this domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. The active

>cd01060 Membrane-FADS-like The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins

Probab=99.69  E-value=3.3e-17  Score=131.75  Aligned_cols=60  Identities=33%  Similarity=0.509  Sum_probs=54.6

Q ss_pred             HHHHHHHhhccccccCChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCC
Q 020224           91 NLFLAIHELSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIP  151 (329)
Q Consensus        91 ~~~~l~He~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~  151 (329)
                      +...++||++|+++++++++|++++.+++.+++.|+.. |+..|..||++++++++|||..
T Consensus        14 ~~~~~~H~~~H~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~H~~HH~~~~~~~~D~~~~   73 (122)
T cd01060          14 GLTVLAHELGHRSFFRSRWLNRLLGALLGLALGGSYGW-WRRSHRRHHRYTNTPGKDPDSA   73 (122)
T ss_pred             HHHHHHHHHhhhhhhccccHHHHHHHHHHHHHcCCHHH-HHHHHHHHhcCcCCCCCCCccc
Confidence            66777899999999999999999998877789999985 9999988999999998899974

They are present in all groups of organisms with the exception of archaea. Membrane FADSs are non-heme, iron-containing, oxygen-dependent enzymes involved in regioselective introduction of double bonds in fatty acyl aliphatic chains. They play an important role in the maintenance of the proper structure and functioning of biological membranes. Alkane hydroxylases are bacterial, integral-membrane di-iron enzymes that share a requirement for iron and oxygen for activity similar to that of membrane FADSs, and are involved in the initial oxidation of inactivated alkanes. Beta-carotene ketolase and beta-carotene hydroxylase are carotenoid biosynthetic enzymes for astaxanthin and zeaxanthin, respectively. This superfamily domain has extensive hydrophobic regions that would

>PF08557 Lipid_DES: Sphingolipid Delta4-desaturase (DES); InterPro: IPR013866 Sphingolipids are important membrane signalling molecules involved in many different cellular functions in eukaryotes

Probab=99.23  E-value=1.1e-11  Score=77.24  Aligned_cols=38  Identities=63%  Similarity=1.132  Sum_probs=36.1

Q ss_pred             ccCCCceecCCCCCcHHHHHHHHhhChHHhhhhCCCCC
Q 020224           13 VMAADFFWSYTDEPHASRRRQILSQYPQIKELFGPDPW   50 (329)
Q Consensus        13 ~~~~~~~~~~~~~~~~~r~~~i~~~~~~~~~l~~~~~~   50 (329)
                      ++++||+|++.++||+.||++|++++|||++|++++|.
T Consensus         1 v~~~DF~W~~~~ePH~~RRk~IL~k~PeIk~L~G~dp~   38 (39)
T PF08557_consen    1 VSRNDFEWVYTDEPHASRRKEILKKHPEIKKLMGPDPL   38 (39)
T ss_pred             CCccccEEeCCCCccHHHHHHHHHhChHHHHHhCCCCC
Confidence            46789999999999999999999999999999999986

Sphingolipid delta 4-desaturase catalyses the formation of (E)-sphing-4-enine []. Some proteins in this entry have bifunctional delta 4-desaturase/C-4-hydroxylase activity. Delta 4-desaturated sphingolipids may play a role in early signalling required for entry into meiotic and spermatid differentiation pathways during Drosophila spermatogenesis []. This small protein associates with FA_desaturase IPR005804 from INTERPRO and appears to be specific to sphingolipid delta 4-desaturase. ; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process, 0016021 integral to membrane

>COG1398 OLE1 Fatty-acid desaturase [Lipid metabolism]

Probab=99.02  E-value=3.1e-09  Score=94.37  Aligned_cols=55  Identities=24%  Similarity=0.240  Sum_probs=44.5

Q ss_pred             HHHHh-hccccccCChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCC
Q 020224           94 LAIHE-LSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDI  150 (329)
Q Consensus        94 ~l~He-~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~  150 (329)
                      +..|- .+|+++.-.+++..++....++.+..|.-+ |-..|..||+++.++ +||..
T Consensus        64 ~G~HRl~sHRa~~~~k~Le~~la~~g~l~~~G~~~~-W~~~HR~HHr~tDTd-~DPh~  119 (289)
T COG1398          64 LGLHRLWSHRAFKAHKWLEYVLAFWGALTTQGPAIE-WVGIHRKHHRKTDTD-QDPHY  119 (289)
T ss_pred             eehhhhhhhhhcccchHHHHHHHHHHHhhcCCCcee-HHHHHHHhhcccCCC-CCCCc
Confidence            44688 467787778899998888777777777775 999999999999887 79953

>PLN02220 delta-9 acyl-lipid desaturase

Probab=98.88  E-value=1.1e-07  Score=87.54  Aligned_cols=60  Identities=22%  Similarity=0.223  Sum_probs=45.8

Q ss_pred             HHHHHHHHh-hccccccCChhhHHHHHHHhcc-cccCccChhhhHhhhhhhcCCCCCCCCCCCCC
Q 020224           90 HNLFLAIHE-LSHNLAFSTPAYNRWLGILANL-PVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPS  152 (329)
Q Consensus        90 ~~~~~l~He-~~H~~~~~~~~~N~~~g~l~~~-~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~  152 (329)
                      .++.+..|- .+|+++.-++++..++..+.++ ..|.+.  .|-..|..||+++.++ +||-.+.
T Consensus        70 lGiT~GyHRl~sHrsfka~~~l~~~la~~g~~a~Qgs~~--~Wv~~HR~HH~~sDt~-~DPHsp~  131 (299)
T PLN02220         70 LSITFSYHRNLAHRSFKLPKWLEYPFAYSALFALQGDPI--DWVSTHRFHHQFTDSD-RDPHSPI  131 (299)
T ss_pred             HHHHHHHHHHHHhhcCcCcHHHHHHHHHHHHHHhCCCHH--HHHHHHHHHHHhcCCC-CCccccc
Confidence            345556787 7899987788888888766544 345555  4999999999999998 7998764

>cd03505 Delta9-FADS-like The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi

Probab=98.49  E-value=1.4e-06  Score=74.35  Aligned_cols=60  Identities=22%  Similarity=0.231  Sum_probs=46.0

Q ss_pred             HHHHHHHh-hccccccCChhhHHHHHHHhcccccCccChhhhHhhhhhhcCCCCCCCCCCCCC
Q 020224           91 NLFLAIHE-LSHNLAFSTPAYNRWLGILANLPVGVPMSVTFQKYHLEHHRFQGVDGIDMDIPS  152 (329)
Q Consensus        91 ~~~~l~He-~~H~~~~~~~~~N~~~g~l~~~~~g~~~~~~wr~~H~~HH~~~~~~~~Dpd~~~  152 (329)
                      +..+..|- ..|+++..++++..++..+.++....|.. .|...|..||+++.++ +||-.+.
T Consensus        18 git~G~HRl~aHrsfk~~~~l~~~l~~~g~~a~qgs~~-~W~~~HR~HH~~sDt~-~DPhs~~   78 (178)
T cd03505          18 GITAGYHRLWAHRSFKAPKPLRIFLAILGSLAGQGSPL-WWVADHRLHHRYSDTD-GDPHSPK   78 (178)
T ss_pred             HHHHHHHHHHhhccCcCcHHHHHHHHHHHHHHcCcCHH-HHHHHHHHhhcccCCC-CCCCCcc
Confidence            44445677 78999888999998888776554444444 4999999999999999 7998754

The delta-9 acyl-lipid desaturases are found in a wide range of bacteria. These enzymes play essential roles in fatty acid metabolism and the regulation of cell membrane fluidity. Acyl-CoA desaturases are the enzymes involved in the CoA-bound desaturation of fatty acids. Mammalian stearoyl-CoA delta-9 desaturase is a key enzyme in the biosynthesis of monounsaturated fatty acids, and in yeast, the delta-9 acyl-CoA desaturase (OLE1) reaction accounts for all de nova unsaturated fatty acid production in Saccharomyces cerevisiae. These non-heme, iron-containing, ER membrane-bound enzymes are part of a three-component enzyme system involving cytochrome b5, cytochrome b5 reductase, and the delta-9 fatty acid desaturase. This complex catalyzes the NADH- and oxygen-dependent i

>KOG1600 consensus Fatty acid desaturase [Lipid transport and metabolism]

Probab=98.48  E-value=8.1e-07  Score=80.82  Aligned_cols=79  Identities=22%  Similarity=0.302  Sum_probs=53.7

Q ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHh-hccccccCChhhHHHHHHHhc-ccccCccChhhhHhhhhhhcCCCCCCCC
Q 020224           70 HDAGWLKILATAYFFGSFLNHNLFLAIHE-LSHNLAFSTPAYNRWLGILAN-LPVGVPMSVTFQKYHLEHHRFQGVDGID  147 (329)
Q Consensus        70 ~~~~w~~~~~~~~~l~~~~~~~~~~l~He-~~H~~~~~~~~~N~~~g~l~~-~~~g~~~~~~wr~~H~~HH~~~~~~~~D  147 (329)
                      ....|..+++ ++++..+...++....|- -+|.++.-++++..++..... ...|-++  .|-..|..||+++.++ +|
T Consensus        62 ~~~~w~t~~~-~~~l~~v~glgITag~HRlwsHRSyKa~kpLr~fla~~~~~A~Qg~~~--~WvrdHR~HHk~tdTD-~D  137 (321)
T KOG1600|consen   62 FSAKWETLLF-AFFLYAVGGLGITAGYHRLWSHRSYKAPKPLRYFLAYCNTLAFQGDII--DWVRDHRVHHKFTDTD-AD  137 (321)
T ss_pred             ccchHHHHHH-HHHHHHHhhceeeeehhhhcccccccCCccHHHHHHHHHHHhccCChh--HHHhhhhhhccccccC-CC
Confidence            3445654433 334333322233344676 789998778888888886643 4567777  4999999999999999 89


Q ss_pred             CCCCC
Q 020224          148 MDIPS  152 (329)
Q Consensus       148 pd~~~  152 (329)
                      |..+.
T Consensus       138 Phn~~  142 (321)
T KOG1600|consen  138 PHNPR  142 (321)
T ss_pred             CCCcc
Confidence            99865

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00