Citrus Sinensis ID: 020301

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
MAKPVSIEVWNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKVI
ccccccccccccccccEEEEEccccHHHHHHHHHHcccEEEEEccccccccHHHHHHHHcccccEEEEcccccccHHHHHHcccccccEEEEcccccccccHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccccEEEEEcccHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHcccccccccccccccccccHHHHHHHccEEEECcccccHHHccccHHHHHccccccEEEEccccccccHHHHHHHHHcccccccccccccccccccccccccccEEEccccccccccc
******IEVWNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASA****
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MAKPVSIEVWNPNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKVI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Glycerate dehydrogenase HPR, peroxisomal Catalyzes the NADH-dependent reduction of hydroxypyruvate into glycerate in the photorespiratory core cycle. Mediates fatty acid beta-oxidation in germinating seeds when malate dehydrogenase is absent.confidentQ9C9W5
Glycerate dehydrogenase confidentP13443
Glyoxylate reductase probableC5A1V0

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.1.-.-Acting on the CH-OH group of donors.probable
1.1.1.-15-hydroxyprostaglandin dehydrogenase (NAD(+)).probable
1.1.1.29Glycerate dehydrogenase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2GCG, chain A
Confidence level:very confident
Coverage over the Query: 14-326
View the alignment between query and template
View the model in PyMOL