Citrus Sinensis ID: 020314

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
Protein Sequence
MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP
Secondary Structure (PSIPRED)
ccccccEEEEEEcccccccccEEEEEccccccccccEEEEEEEEcccHHHHHHHHcccccccccccccccccccEEEEEEEcccccccccccEEEEEcccccEEEEEEccccccccccccccHHHHHcccHHHHHHHHHHHHHHcccccccccccEEEEEccccccHHHHHHHHHHcccEEEEEcccccHHHHHHccccEEEcccccccccccccccccEEEEEEccccccHHccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHccccccEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEEcccccccEEEEEEccccccccccEEEEEEEEcccHHHHHHHcccccccccccccccccccEEEEEEEEcccccccccccEEEEEcccccEEEEEEEcHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHcccEEEEcccccHHEEEcccccccEEEEEccccHHHHHHHHHHccccEEEEEEccccccccccHHHHHHcccEEEEEEccccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHccccEEEEEEcc
Coil and Loop (DISEMBL)
MAGKAVMHAVQYdsygggvaglkhvevpvptpnkdeALLKVEAAsinpidwklqkgmlrpflprkfpfipasdvagEVIGLgsevknfkvGDKVVAVLSGGGLAEFAVAkesltvarpqevsaaegagipcaglTAHQALTQSlgvkldgsgqqkNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKslgadevldyktpdgaalkspsgrkydAVINCvtgipwstfepnlgttgkvidfnpsprVLLTFAWKKLtfskkqlvpfsvspkgenLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSisgratgkiivep
Flexible Loop (DISEMBL)
MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGsevknfkvGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTpdgaalkspsgrkyDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKqlvpfsvspkgenLDFLVKLVKEGKLktvidskhslskaedawaksisgratgkiivep
Low Complexity Region (SEG)
MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP
Disordered region (IsUnstruct)
******MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGA******GRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVID****************************
Disordered Region (DISOPRED)
****AVM*AVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP
Disordered Region (DISEMBL)
MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP
Disordered Region (DISPRO)
****AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	327	2.2.26 [Sep-21-2011]
Q9SV68	329	Putative quinone-oxidored	yes	no	0.996	0.990	0.742	1e-136
Q8H0M1	329	Quinone-oxidoreductase ho	N/A	no	0.996	0.990	0.715	1e-134
Q9ZUC1	386	Quinone oxidoreductase-li	no	no	0.899	0.761	0.320	2e-28
Q7T3C7	387	Reticulon-4-interacting p	yes	no	0.972	0.821	0.306	4e-28
Q0VC50	396	Reticulon-4-interacting p	yes	no	0.948	0.782	0.310	2e-26
Q8WWV3	396	Reticulon-4-interacting p	yes	no	0.951	0.785	0.305	6e-26
Q54II4	352	Reticulon-4-interacting p	yes	no	0.966	0.897	0.263	1e-25
O42909	347	Zinc-type alcohol dehydro	yes	no	0.868	0.818	0.327	6e-25
Q924D0	396	Reticulon-4-interacting p	yes	no	0.978	0.808	0.309	8e-25
O97764	330	Zeta-crystallin OS=Bos ta	no	no	0.935	0.927	0.299	1e-21

>sp|Q9SV68|QORH_ARATH Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1

 Score =  485 bits (1248), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/330 (74%), Positives = 277/330 (83%), Gaps = 4/330 (1%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           MAGK +MHA+QY+SYGGG AGL+HV+VPVPTP  +E  LK+EA S+NP+DWK+QKGM+RP
Sbjct: 1   MAGK-LMHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRP 59

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVAR 117
           FLPRKFP IPA+DVAGEV+ +GS VKNFK GDKVVAVLS   GGGLAEFAVA E LTV R
Sbjct: 60  FLPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLGGGGLAEFAVATEKLTVKR 119

Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG 177
           PQEV AAE A +P AGLTA QALT   G+KLDG+G++ NIL+TAASG VG YAVQLAKL 
Sbjct: 120 PQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLA 179

Query: 178 NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237
           N HVTATCGARNIE VKSLGADEVLDYKTP+GAALKSPSG+KYDAV++C  GIP+S FEP
Sbjct: 180 NAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEP 239

Query: 238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297
           NL   GKVID  P P  + T+A KK+T SKKQLVP  + PK ENL+F+V LVKEGK+KTV
Sbjct: 240 NLSENGKVIDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTV 299

Query: 298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           IDSKH LSKAEDAWAKSI G ATGKIIVEP
Sbjct: 300 IDSKHPLSKAEDAWAKSIDGHATGKIIVEP 329

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q8H0M1|QORH_SPIOL Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1

 Score =  478 bits (1230), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/330 (71%), Positives = 269/330 (81%), Gaps = 4/330 (1%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           MA K +MHA+QY  YGGG   LKHVEV VP P  DE LLK+EAA++NPIDWK+QKG+LRP
Sbjct: 1   MAAK-LMHAIQYSGYGGGTDALKHVEVAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRP 59

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVAR 117
            LPRKFP IP +DVAGEV+  GS V  FK GDKVVAVLS   GG LAE+AVAKE+LTVAR
Sbjct: 60  LLPRKFPTIPGTDVAGEVVQAGSAVNRFKTGDKVVAVLSHATGGALAEYAVAKENLTVAR 119

Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG 177
           P EVSAAEGA +P A LTAHQALTQ   +KLDGSG++KNILITAASG VG YAVQLAKLG
Sbjct: 120 PPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAKLG 179

Query: 178 NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237
           NTHVTATCGARN++ VK LGADEVLDYKTP+GA+L SPSG+KYD V++  +GIPWSTFEP
Sbjct: 180 NTHVTATCGARNLDFVKGLGADEVLDYKTPEGASLTSPSGKKYDYVVHGASGIPWSTFEP 239

Query: 238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297
           NL   GKVID  P P  ++TFAWKKLTFSKKQLVP  + PK  N +++V LVKE KLKTV
Sbjct: 240 NLSEAGKVIDLTPGPTAMMTFAWKKLTFSKKQLVPLLLIPKIPNFEYVVNLVKEKKLKTV 299

Query: 298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           IDSKH LSK EDAW++ + G ATGKII+EP
Sbjct: 300 IDSKHPLSKGEDAWSRIMGGHATGKIIIEP 329

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9ZUC1|QORL_ARATH Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2

 Score =  126 bits (316), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 158/334 (47%), Gaps = 40/334 (11%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A  Y  YGG         + VP   +D+ L+KV AA++NP+D K ++G  +       
Sbjct: 78  MKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKA-TDSPL 136

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG---------GGLAEFAVAKESLTVAR 117
           P +P  DVAG V+ +GS VK+ K GD+V A +S          G LAE+   +E L   +
Sbjct: 137 PTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALK 196

Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-- 175
           P+ +  A+ AG+P A  TA + L ++           K+IL+   +G VG   +QLAK  
Sbjct: 197 PKNIDFAQAAGLPLAIETADEGLVRT------EFSAGKSILVLNGAGGVGSLVIQLAKHV 250

Query: 176 LGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTF 235
            G + V AT     +ELV+SLGAD  +DY   +   L       +DA+  C   +     
Sbjct: 251 YGASKVAATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKV--- 307

Query: 236 EPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK 295
              +   GKV        V LT A     F       F V+  G+ L  L   ++ GK+K
Sbjct: 308 ---IKEGGKV--------VALTGAVTPPGFR------FVVTSNGDVLKKLNPYIESGKVK 350

Query: 296 TVIDSK--HSLSKAEDAWAKSISGRATGKIIVEP 327
            V+D K     S+  DA++   +  ATGK++V P
Sbjct: 351 PVVDPKGPFPFSRVADAFSYLETNHATGKVVVYP 384

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q7T3C7|RT4I1_DANRE Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2

 Score =  125 bits (315), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 170/362 (46%), Gaps = 44/362 (12%)

Query: 2   AGKAVMHAVQYDSYGGG--VAGLKHVEVPV-PTPNKDEALLKVEAASINPIDWKLQKGML 58
           A + VM A   D YG    +   K+  +P+   PN  E ++KV AA +NPID  ++ G  
Sbjct: 24  ARRTVMPAWVIDKYGKNDVLRFTKNAALPIIHYPN--EVVVKVHAAGLNPIDISMRGGYG 81

Query: 59  RPFLPRK------------FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL---SGGGL 103
              +  K            FP I   DV+GE++  G +VK FK GD+V A +     G L
Sbjct: 82  AATMAMKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIPPWKQGSL 141

Query: 104 AEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS 163
           AEF V   +    +P+ +   E A IP    TA  A+  + G+  D S + K +LI   S
Sbjct: 142 AEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAK-KRVLILGGS 200

Query: 164 GAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKT-PDGAALKSPSGRKYDA 222
           G VG +A+Q+ K    HVT TC      LV+ LGAD+V+DY   P    LK+    K+D 
Sbjct: 201 GGVGTFAIQMVKAWGAHVTVTCSQNAERLVRDLGADDVVDYTAGPVEKQLKNLE--KFDL 258

Query: 223 VINCVTG----------IPWS------TFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFS 266
           +++ + G           PWS         P L  T ++   +   +  +T   K +   
Sbjct: 259 ILDSIGGETEKWALDLLKPWSGAKFVTLITPFLQNTDRLGLADGMMQSAVTVGCKVVKNL 318

Query: 267 KKQLVPFS---VSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKI 323
           +K  V +     +P G  LD + ++V  GK++ V++   S ++  +A+ K   G A GK 
Sbjct: 319 RKG-VHYRWGFFAPSGSALDEVSEMVDAGKVRPVVEEVFSFAQVPEAFQKVEQGHARGKT 377

Query: 324 IV 325
           +V
Sbjct: 378 VV 379

May be a potent inhibitor of regeneration.

Danio rerio (taxid: 7955)

>sp|Q0VC50|RT4I1_BOVIN Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 174/364 (47%), Gaps = 54/364 (14%)

Query: 6   VMHAVQYDSYGGG--VAGLKHVEVP-VPTPNKDEALLKVEAASINPIDWKLQKG------ 56
           VM A   D YG    +   +++ +P +  PN  E ++KV AASINPID  ++ G      
Sbjct: 42  VMPAWVIDKYGSNEVLRFTQNMMIPMIHYPN--EVIIKVHAASINPIDVNMRSGYGATAL 99

Query: 57  -MLRPFLPRK-----FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL---SGGGLAEFA 107
            M R  L  K     FP     DV+G V+  G +V+ FK GD+V A +     G L+EF 
Sbjct: 100 NMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWKQGTLSEFV 159

Query: 108 VAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG 167
           V   +    +P+ ++  + A +P   LTA  A+ +  G+  D +   K +LI  ASG VG
Sbjct: 160 VVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLN-DRNCTGKRVLILGASGGVG 218

Query: 168 LYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCV 227
            +A+Q+ K  + HVTA C     ELV+ LGAD+V+DYK+ +  A +  S + +D +++ V
Sbjct: 219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEA-QLKSSKPFDFILDNV 277

Query: 228 TGIP----------WS---------TFEPNLGTTGKVID------FNPSPRVLLTFAWKK 262
            G            WS          F  N+   G + D           + L  F W+ 
Sbjct: 278 GGSTETWALKFLKKWSGATYVTLVTPFLLNMDRLG-IADGMLQTGVTVGSKTLKHF-WQG 335

Query: 263 LTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGK 322
           + +   +   F  S  G  LD + +LV+ GK++ VI+     SK  +A+ K   G A GK
Sbjct: 336 VHY---RWAFFMAS--GPCLDDIAELVEAGKIQPVIEKTFPFSKVPEAFLKVERGHARGK 390

Query: 323 IIVE 326
            ++ 
Sbjct: 391 TVIN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Bos taurus (taxid: 9913)

>sp|Q8WWV3|RT4I1_HUMAN Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2

 Score =  118 bits (296), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 171/363 (47%), Gaps = 52/363 (14%)

Query: 6   VMHAVQYDSYGGG--VAGLKHVEVPV-PTPNKDEALLKVEAASINPIDWKLQKG------ 56
           VM A   D YG    +   +++ +P+   PN  E ++KV AAS+NPID  ++ G      
Sbjct: 42  VMPAWVIDKYGKNEVLRFTQNMMMPIIHYPN--EVIVKVHAASVNPIDVNMRSGYGATAL 99

Query: 57  -MLRPFLPRK-----FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL---SGGGLAEFA 107
            M R  L  K     FP     DV+G V+  G +VK FK GD+V A +     G L+EF 
Sbjct: 100 NMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFV 159

Query: 108 VAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG 167
           V   +    +P+ ++  + A +P   LTA  A+ +  G+  D +   K +LI  ASG VG
Sbjct: 160 VVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLN-DKNCTGKRVLILGASGGVG 218

Query: 168 LYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCV 227
            +A+Q+ K  + HVTA C     ELV+ LGAD+V+DYK+      +  S + +D +++ V
Sbjct: 219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKS-GSVEEQLKSLKPFDFILDNV 277

Query: 228 TGIPWSTFEPNL--GTTGKVIDFNPSPRVL----------------------LTFAWKKL 263
            G    T+ P+     +G       +P +L                      L   WK +
Sbjct: 278 GGST-ETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGV 336

Query: 264 TFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKI 323
            +   +   F  S  G  LD + +LV  GK++ VI+     SK  +A+ K   G A GK 
Sbjct: 337 HY---RWAFFMAS--GPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKT 391

Query: 324 IVE 326
           ++ 
Sbjct: 392 VIN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Homo sapiens (taxid: 9606)

>sp|Q54II4|RT4I1_DICDI Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=rtn4ip1 PE=3 SV=1

 Score =  117 bits (294), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 163/353 (46%), Gaps = 37/353 (10%)

Query: 7   MHAVQYDSYGGGVAGLKH-VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF--LP 63
           M  +  + YG  +  L++  ++PVP P K + L+K+ + SINP+D  ++KG       L 
Sbjct: 1   MKGILLNGYGESLDLLEYKTDLPVPKPIKSQVLIKIHSTSINPLDNVMRKGYASSIVDLK 60

Query: 64  RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAV---LSGGGLAEFAVAKESLTVARPQE 120
            K P I   + +GE++ +G  V ++++GD+V +     S G   E+    ES    +P+ 
Sbjct: 61  LKLPIILGRECSGEIVEIGDSVWDYEIGDQVWSASPPFSMGSHCEYITVDESEISLKPKN 120

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK--LGN 178
           ++  + A IP A LTA  A+   L      +   K IL+   +G+VG + +QL K  L  
Sbjct: 121 LTHQQSASIPFASLTAWNAIYNVLPTNKKITTNTK-ILVNGGNGSVGFFILQLLKKHLNV 179

Query: 179 THVTATCGARNIELVKSLG-ADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237
             V+ TC  ++ E +K L   +E +DY   +   +      K+D + NC  G        
Sbjct: 180 NQVSTTCNIKHFEKLKKLTLVNETIDY---NNLKINDNDNNKFDLIFNCYDGGKNQNENE 236

Query: 238 N------------LGTTGKVIDFNPSPRVL----------LTFAWK-KLTFSKKQLVPFS 274
                        +G  G ++ F+    VL          L  + + K  +SK   + ++
Sbjct: 237 KKCIDALKDGGNLIGFNGPLVKFSDKDGVLSGLPMGMMNQLNSSERIKKQYSKNVHLDYA 296

Query: 275 V-SPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
           + SP G  L  + KL +   L   ID + +L++ +DA+    +  + GKII+ 
Sbjct: 297 IFSPSGSTLKQISKLYENNILIPNIDKQFNLNQIKDAYTCFENSNSNGKIIIN 349

Dictyostelium discoideum (taxid: 44689)

>sp|O42909|YBI2_SCHPO Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.02c PE=3 SV=1

 Score =  115 bits (287), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 140/308 (45%), Gaps = 24/308 (7%)

Query: 36  EALLKVEAASINPIDWKLQKG--MLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDK 93
           + L++V A SINP+D+KL     M+   L  K P IP  D AG V+ +GSEVK F    +
Sbjct: 45  DVLVEVVATSINPLDYKLMNTYQMIAKAL-FKLPNIPGYDFAGRVLAVGSEVKEFSATQR 103

Query: 94  VVAVLS-------GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGV 146
           V    S       GG  A   V  +      P  VS  EGAG   AGLTA + L + + V
Sbjct: 104 VWGCQSFPRAGRQGGSCATHIVTGDKDVWHLPDGVSFNEGAGFGIAGLTAWEVLVRQMKV 163

Query: 147 KLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKT 206
           K         ++I  ASG VG +AV LAK     VT      N++L KSLGA   LDYK 
Sbjct: 164 K-----PGTKLVIEGASGGVGTFAVALAKALECEVTTISSTENLDLCKSLGATHTLDYK- 217

Query: 207 PDGAALKSPSGRKYDAVINCVT-GIPW---STF-EPN---LGTTGKVIDFNPSPRVLLTF 258
            D    +      YD V +CV   + +   S F +P+    G  G +       R+  T 
Sbjct: 218 KDNLVERLADLGPYDFVFDCVNDNVLYRASSKFVKPDGAFFGIGGDITLSYVGSRLSRTL 277

Query: 259 AWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGR 318
             + L  S        +    E L   V  V +  +KTVIDS +      +A+ + ++ R
Sbjct: 278 RPRVLGGSSHSYYNILLHVDQEMLRDFVDFVMKHNIKTVIDSVYDFEDTVEAFNRLMTHR 337

Query: 319 ATGKIIVE 326
             GK+I++
Sbjct: 338 CKGKVIIK 345

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q924D0|RT4I1_MOUSE Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2

 Score =  114 bits (286), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 167/362 (46%), Gaps = 42/362 (11%)

Query: 2   AGKAVMHAVQYDSYGGG--VAGLKHVEVPV-PTPNKDEALLKVEAASINPIDWKLQKG-- 56
           A   VM A   D YG    +   +++ +P+   PN  E ++KV AAS+NPID  ++ G  
Sbjct: 38  ARSTVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPN--EVIIKVHAASVNPIDVNMRSGYG 95

Query: 57  -----MLRPFLPRK-----FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL---SGGGL 103
                M R  L  K     FP     DV+G V+  G +VK F+ GD+V A +     G L
Sbjct: 96  ATALNMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPWKQGTL 155

Query: 104 AEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS 163
           +EF V   +    +P+ ++  + A +P   LTA  A+ +  G+  D + + K  LI  AS
Sbjct: 156 SEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLS-DKNCKGKRALILGAS 214

Query: 164 GAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAV 223
           G VG +A+Q+ K    HVTA C     ELV+ LGADEV+DY T      +  S + +D +
Sbjct: 215 GGVGTFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDY-TLGSVEEQLKSLKLFDFI 273

Query: 224 INCVTGIP----------WS---------TFEPNLGTTGKVIDFNPSPRVLLTFAWKKLT 264
           ++ V G            WS          F  N+   G       +   + T A K L 
Sbjct: 274 LDNVGGSTETWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGMLQTGVTVGTKALKHLW 333

Query: 265 FSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKII 324
                   F ++  G  LD + +LV  GK++ VI+     S+  +A+ K   G A GK +
Sbjct: 334 QGVHYRWAFFMA-SGPYLDEIAELVDAGKIRPVIERTFPFSEVPEAFLKVERGHARGKTV 392

Query: 325 VE 326
           V 
Sbjct: 393 VN 394

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Mus musculus (taxid: 10090)

>sp|O97764|QOR_BOVIN Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2

 Score =  103 bits (258), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 159/341 (46%), Gaps = 35/341 (10%)

Query: 3   GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGM--LRP 60
           G+ +M A++   +GG        +V VP P   + L+KV+A  +NP+D  ++ G   ++P
Sbjct: 4   GQKLMRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHNIKP 63

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS-GGGLAEFAVAKESLTVARPQ 119
            L    P+ P  DVAG +  +G  V  FK GD+V    +  GG AE+A+A +      P+
Sbjct: 64  LL----PYTPGFDVAGIIEAVGESVSAFKKGDRVFTTRTISGGYAEYALAADHTVYTLPE 119

Query: 120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT 179
           ++   +GA I     TA++AL  S  VK       +++L+  ASG VG+ A Q+A+    
Sbjct: 120 KLDFKQGAAIGIPYFTAYRALLHSACVK-----PGESVLVHGASGGVGIAACQIARAYGL 174

Query: 180 HVTATCGARNIE-LVKSLGADEVLDYKTPDGA-ALKSPSGRK-YDAVINCVTGIPWSTFE 236
            V  T      + +V   GA +V ++K  D    +K   G K  D +I  +  +  S   
Sbjct: 175 KVLGTASTEEGQKIVLENGAHKVFNHKEADYIDKIKKSVGEKGVDVIIEMLANVNLSNDL 234

Query: 237 PNLGTTGKV--------IDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL 288
             L   G+V        I+ NP   +    + K +T        FS S K E   F   L
Sbjct: 235 NLLSHGGRVIVVGSRGTIEINPRDTMTKESSIKGVTL-------FS-STKEEFQQFAAAL 286

Query: 289 ---VKEGKLKTVIDSKHSLSKAEDAWAKSI-SGRATGKIIV 325
              ++ G L+ VI  ++ L KA  A    I S  ATGK+I+
Sbjct: 287 QAGMEIGWLRPVIGPQYLLEKATQAHENIIHSSGATGKMIL 327

Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding (By similarity). Has minimal or no quinone reductase activity. Binds strongly to single-stranded DNA.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
224060149	335	predicted protein [Populus trichocarpa]	0.996	0.973	0.758	1e-142
118488767	329	unknown [Populus trichocarpa]	0.996	0.990	0.757	1e-140
224121506	329	predicted protein [Populus trichocarpa]	0.996	0.990	0.760	1e-139
224056699	332	predicted protein [Populus trichocarpa]	0.993	0.978	0.754	1e-139
356567800	329	PREDICTED: putative quinone-oxidoreducta	0.990	0.984	0.746	1e-138
356527330	329	PREDICTED: putative quinone-oxidoreducta	0.990	0.984	0.743	1e-137
312283475	329	unnamed protein product [Thellungiella h	0.996	0.990	0.736	1e-136
77416923	329	ripening regulated protein-like [Solanum	0.996	0.990	0.754	1e-136
359494786	329	PREDICTED: putative quinone-oxidoreducta	0.996	0.990	0.775	1e-136
378405612	330	quinone oxidoreductase [Camellia sinensi	0.990	0.981	0.743	1e-135

>gi|224060149|ref|XP_002300061.1| predicted protein [Populus trichocarpa] gi|222847319|gb|EEE84866.1| predicted protein [Populus trichocarpa]

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 255/336 (75%), Positives = 282/336 (83%), Gaps = 10/336 (2%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           MAGK +MHAVQY +YGGG AGLKHVEVPVP+  +DE LLK+EA S+NP+DWK+QKG+LRP
Sbjct: 1   MAGK-LMHAVQYSTYGGGAAGLKHVEVPVPSAKRDEVLLKLEATSLNPVDWKMQKGLLRP 59

Query: 61  FLPRKFPFIP------ASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKE 111
            LPR+FP+IP       +DVAGEV+ +G  V NFK GDKVVA+LS   GGGLAEF VAK+
Sbjct: 60  LLPRRFPYIPETFVATGADVAGEVVEVGPGVTNFKTGDKVVAILSHISGGGLAEFVVAKK 119

Query: 112 SLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAV 171
           SL VARP EVSAAEGAG+P AGLTAHQA+TQS GVKLDGSG QKNILITAASG VG YAV
Sbjct: 120 SLPVARPPEVSAAEGAGLPVAGLTAHQAVTQSAGVKLDGSGNQKNILITAASGGVGHYAV 179

Query: 172 QLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP 231
           QLAKLGNTHVTATCGARNIE VKSLGADEVLDYKTP+GAALKSPSG+KYDAVI+C  GIP
Sbjct: 180 QLAKLGNTHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCAAGIP 239

Query: 232 WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE 291
           WSTFEPNL   GKVID  P P   +  A+KKLTFSKKQLVP  + P GENL++LV LVKE
Sbjct: 240 WSTFEPNLSANGKVIDITPGPSAFMASAFKKLTFSKKQLVPLLLIPNGENLNYLVNLVKE 299

Query: 292 GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           GKLKTVIDSKH LS+AEDAWAK I G ATGKIIVEP
Sbjct: 300 GKLKTVIDSKHPLSRAEDAWAKIIDGHATGKIIVEP 335

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488767|gb|ABK96194.1| unknown [Populus trichocarpa]

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 250/330 (75%), Positives = 278/330 (84%), Gaps = 4/330 (1%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           MAGK +MHAVQY +YGGG AGLKHVEVPVP+  +DE LLK+EA S+NP+DWK+Q G+LRP
Sbjct: 1   MAGK-LMHAVQYSTYGGGAAGLKHVEVPVPSAKRDEVLLKLEATSLNPVDWKMQNGLLRP 59

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVAR 117
            LP +FP++P +DVAGEV+ +G  V NFK GDKVVA+LS   GGGLAEF VAK+ L VAR
Sbjct: 60  LLPWRFPYVPGADVAGEVVEVGPGVTNFKTGDKVVAILSHISGGGLAEFVVAKKGLPVAR 119

Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG 177
           P EVSAAEGAG+P AGLTAHQA+TQS GVKLDGSG QKNILITAASG VG YAVQLAKLG
Sbjct: 120 PPEVSAAEGAGLPVAGLTAHQAVTQSAGVKLDGSGNQKNILITAASGGVGHYAVQLAKLG 179

Query: 178 NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237
           NTHVTATCGARNIE VKSLGADEVLDYKTP+GAALKSPSG+KYDAVI+C  GIPWSTFEP
Sbjct: 180 NTHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCAAGIPWSTFEP 239

Query: 238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297
           NL   GKVID  P     +  A+KKLTFSKKQLVP  + P GENL++LV LVKEGKLKTV
Sbjct: 240 NLSANGKVIDITPGLSAYMASAFKKLTFSKKQLVPLLLIPNGENLNYLVNLVKEGKLKTV 299

Query: 298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           IDSKH LS+AEDAWAK I G ATGKIIVEP
Sbjct: 300 IDSKHPLSRAEDAWAKIIDGHATGKIIVEP 329

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121506|ref|XP_002330717.1| predicted protein [Populus trichocarpa] gi|222872493|gb|EEF09624.1| predicted protein [Populus trichocarpa]

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 251/330 (76%), Positives = 282/330 (85%), Gaps = 4/330 (1%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           MAGK +MHA+QYDSYGGG AGLKHVEVPVP+  KDE LLK+EA S+NP D+++QKG++RP
Sbjct: 1   MAGK-LMHALQYDSYGGGAAGLKHVEVPVPSAKKDEVLLKLEATSLNPYDFRIQKGVVRP 59

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG---GGLAEFAVAKESLTVAR 117
           FLPR FP+IP  D+AGEV+ +G  V++FK GDKVVAVLSG   GGLAEFAVAK+SL+VAR
Sbjct: 60  FLPRSFPYIPGLDIAGEVVAVGPGVEDFKTGDKVVAVLSGSSGGGLAEFAVAKKSLSVAR 119

Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG 177
           P EVSAAE AG+P AGL A++ALTQ  GVKLDGSG QKNILITAASG VG YAVQLAKLG
Sbjct: 120 PPEVSAAEAAGLPIAGLAAYEALTQCAGVKLDGSGIQKNILITAASGGVGHYAVQLAKLG 179

Query: 178 NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237
           NT+VTATCGARNIE VK LGADEVLDYKTP+GAALKSPSG+KYDAVI+C  GIPWSTFEP
Sbjct: 180 NTYVTATCGARNIEFVKDLGADEVLDYKTPEGAALKSPSGKKYDAVIHCALGIPWSTFEP 239

Query: 238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297
           NL   GKVI  +P P  ++TFA KKLTFSKKQL+P  ++PKGENL  LV LVKEGKLKTV
Sbjct: 240 NLSENGKVIHLSPGPSAMITFAVKKLTFSKKQLMPLIITPKGENLKCLVNLVKEGKLKTV 299

Query: 298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           IDSKH LSKAEDAWAK I G ATGKIIVEP
Sbjct: 300 IDSKHPLSKAEDAWAKGIDGHATGKIIVEP 329

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056699|ref|XP_002298979.1| predicted protein [Populus trichocarpa] gi|222846237|gb|EEE83784.1| predicted protein [Populus trichocarpa]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 249/330 (75%), Positives = 282/330 (85%), Gaps = 5/330 (1%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           MAGK +MHA+QYDSY GG A LKHVEVP+P+P K E LLK+EA S+NPIDWK+QKG LRP
Sbjct: 3   MAGK-LMHAIQYDSYDGGPAALKHVEVPLPSPQKYEVLLKLEATSLNPIDWKIQKGKLRP 61

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVAR 117
           F PRKFP+IP +DVAGEV+ +G+EVKNFK+GD+VVA L    GGGLAE+AVAKESLTV R
Sbjct: 62  FFPRKFPYIPGTDVAGEVVEVGAEVKNFKIGDRVVAELGHLYGGGLAEYAVAKESLTVVR 121

Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG 177
           P EVSAAEGAG+  +G+TA+QALTQ  G+KLDGSGQQKNILITAASG VGLYAVQLAKLG
Sbjct: 122 PAEVSAAEGAGLLVSGITAYQALTQHGGIKLDGSGQQKNILITAASGGVGLYAVQLAKLG 181

Query: 178 NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237
           NTHVTATCGARNIELVKSLGADEVLDYKTP+GAALKSPSG+KYD V++C  GI WSTFEP
Sbjct: 182 NTHVTATCGARNIELVKSLGADEVLDYKTPEGAALKSPSGKKYDVVLHCALGISWSTFEP 241

Query: 238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVP-FSVSPKGENLDFLVKLVKEGKLKT 296
            L  +GKVID  P    ++TF  KKLTFSKKQLVP  +VSP  E+LD L+KLVKEGKLKT
Sbjct: 242 TLSESGKVIDITPGASAMMTFVLKKLTFSKKQLVPILTVSPSIESLDCLIKLVKEGKLKT 301

Query: 297 VIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
           +IDS+H L KAEDAWAKSI G ATGKI+VE
Sbjct: 302 IIDSRHPLRKAEDAWAKSIDGHATGKIVVE 331

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567800|ref|XP_003552103.1| PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic-like [Glycine max]

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/327 (74%), Positives = 279/327 (85%), Gaps = 3/327 (0%)

Query: 3   GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFL 62
           GK +MHAVQYDSYGGG AGLKHVEVP+PTP+KDE L+KVEAASINP DWK+QK ML P L
Sbjct: 2   GKKLMHAVQYDSYGGGPAGLKHVEVPIPTPSKDEVLIKVEAASINPFDWKVQKRMLWPLL 61

Query: 63  PRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAV---LSGGGLAEFAVAKESLTVARPQ 119
           PRKFP IP +D+ GEV  +G  V+ FK GDKVVA+    +GGGLAEFAVAKES+T +RP 
Sbjct: 62  PRKFPHIPGTDITGEVTEVGQGVQKFKPGDKVVAIVNPFNGGGLAEFAVAKESVTASRPS 121

Query: 120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT 179
           E SA+E A +P AGLTA QALT+S+G+KLDGSG++K+IL+TAASG VG YAVQLAKLGNT
Sbjct: 122 ETSASECAALPVAGLTALQALTKSIGIKLDGSGERKSILVTAASGGVGHYAVQLAKLGNT 181

Query: 180 HVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNL 239
           HVTATCGARNIELVKSLGADEV+DYKTPDGAALKSPSG+KYDAVI+C  G PWSTFEPNL
Sbjct: 182 HVTATCGARNIELVKSLGADEVIDYKTPDGAALKSPSGKKYDAVIHCAMGFPWSTFEPNL 241

Query: 240 GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVID 299
             TGKV+D  PS   +LTFA KKLTFSKKQLVP  + PKGE+L  L+ LVKEGKLKTV+D
Sbjct: 242 TVTGKVVDITPSSASMLTFALKKLTFSKKQLVPLLLFPKGEDLQHLIHLVKEGKLKTVVD 301

Query: 300 SKHSLSKAEDAWAKSISGRATGKIIVE 326
           SK+ L+KAEDAWAKSI+G ATGKII+E
Sbjct: 302 SKYPLTKAEDAWAKSITGHATGKIIIE 328

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527330|ref|XP_003532264.1| PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic-like [Glycine max]

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 243/327 (74%), Positives = 279/327 (85%), Gaps = 3/327 (0%)

Query: 3   GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFL 62
           GK +MHAVQYDSYGGG AGLKHVEVP+PTP+KDE L+KVEAA +NP DWK+QK ML P  
Sbjct: 2   GKKLMHAVQYDSYGGGPAGLKHVEVPLPTPSKDEVLIKVEAAGLNPFDWKVQKRMLWPLF 61

Query: 63  PRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAV---LSGGGLAEFAVAKESLTVARPQ 119
           P KFP+IP +D+ GEV+ +G  V+ FK GDKVVA     SGGGLAEFAVAKES+T +RP 
Sbjct: 62  PCKFPYIPGTDIVGEVMEVGQGVRKFKPGDKVVAFVNPFSGGGLAEFAVAKESITASRPS 121

Query: 120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT 179
           E SA+E AG+P AGLTA QALT+S+G+KLDGSG++KNIL+TAASG VG YAVQLAKLGNT
Sbjct: 122 ESSASECAGLPVAGLTALQALTKSIGIKLDGSGERKNILVTAASGGVGHYAVQLAKLGNT 181

Query: 180 HVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNL 239
           HVTATCGARNIELVKSLGADEV+DYKTPDGAALKSPSG+KYDAVI+CV G PWSTFEPNL
Sbjct: 182 HVTATCGARNIELVKSLGADEVIDYKTPDGAALKSPSGKKYDAVIHCVVGFPWSTFEPNL 241

Query: 240 GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVID 299
              GKV+D +PS   +LTFA KKLTFSKKQLVP  + PKGE+L +L+ LVKEGKLKTV+D
Sbjct: 242 TMNGKVVDISPSSASMLTFALKKLTFSKKQLVPLLLIPKGEDLQYLIDLVKEGKLKTVVD 301

Query: 300 SKHSLSKAEDAWAKSISGRATGKIIVE 326
           SK+ L+KAEDAWAKSI G ATGKII+E
Sbjct: 302 SKYPLTKAEDAWAKSIDGHATGKIIIE 328

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312283475|dbj|BAJ34603.1| unnamed protein product [Thellungiella halophila]

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 243/330 (73%), Positives = 277/330 (83%), Gaps = 4/330 (1%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           MAGK +MHA+QY+SYGGG A LKHV+VPVP+P  +E LLK+EA S+NP+DWK+QKGM+RP
Sbjct: 1   MAGK-LMHALQYESYGGGAAALKHVQVPVPSPMSNEVLLKLEATSLNPVDWKIQKGMIRP 59

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVAR 117
           FLPRKFP IPA+DVAGEV+ +GS VKNFK GDKVV+VLS   GGGLAEFAVA E LTV R
Sbjct: 60  FLPRKFPCIPATDVAGEVMEVGSGVKNFKAGDKVVSVLSHLTGGGLAEFAVASEKLTVRR 119

Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG 177
           P+EV  AE A +P AGLTA QALT   G+KLDG+G Q NIL+TAASG VG YAVQLAKLG
Sbjct: 120 PEEVGPAEAASLPVAGLTALQALTNPAGLKLDGTGHQANILVTAASGGVGHYAVQLAKLG 179

Query: 178 NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237
           N HVTATCGARNI+ VKSLGADEVLDYKTP+GAALKSPSG+KYDAVI+C  GIP+STFEP
Sbjct: 180 NAHVTATCGARNIDFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCANGIPFSTFEP 239

Query: 238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297
           NL   GKVID  P P  + T+A KK+T SKKQLVP  + PK ENL+F+V LVKEGK+KTV
Sbjct: 240 NLAANGKVIDITPGPSAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTV 299

Query: 298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           IDSKH LSKAE+AWAKSI G ATGKIIV+P
Sbjct: 300 IDSKHPLSKAEEAWAKSIDGHATGKIIVQP 329

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|77416923|gb|ABA81857.1| ripening regulated protein-like [Solanum tuberosum]

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/330 (75%), Positives = 277/330 (83%), Gaps = 4/330 (1%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           MAGK +M AVQYDSYGGG A LKHVEVPVPTP KDE L+KVEA SINP+D K+QKGM RP
Sbjct: 1   MAGK-IMQAVQYDSYGGGAAALKHVEVPVPTPTKDEVLVKVEATSINPLDCKIQKGMFRP 59

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVAR 117
            LP KFPFIPA+DVAGEV+ +GS VK+ K GDKVVA+LS   GGGLAE+AV KESLTV+R
Sbjct: 60  LLPPKFPFIPATDVAGEVVEVGSNVKSSKAGDKVVAMLSTKSGGGLAEYAVPKESLTVSR 119

Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG 177
           P EVSAAEGAG+  AGLTA QAL     VKLDG+G +KNIL+TAASG VG YAVQLAKLG
Sbjct: 120 PAEVSAAEGAGLLIAGLTALQALVNPAEVKLDGTGPRKNILVTAASGGVGHYAVQLAKLG 179

Query: 178 NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237
           N HVTATCGARN + VKSLGADE+LDYKTP+GAALKSPSG+KYDAVINC TGIPWSTFEP
Sbjct: 180 NAHVTATCGARNFDFVKSLGADEILDYKTPEGAALKSPSGQKYDAVINCTTGIPWSTFEP 239

Query: 238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297
           NL ++GKVID  P    + TFA KKLTFSKKQLVPF ++ K ENL+ LV+LVKEGKLKTV
Sbjct: 240 NLSSSGKVIDLTPGASSMWTFAVKKLTFSKKQLVPFLLNAKKENLELLVRLVKEGKLKTV 299

Query: 298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           IDSK  LSKAEDAW++SI G ATGKI VEP
Sbjct: 300 IDSKFPLSKAEDAWSRSIDGHATGKIFVEP 329

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494786|ref|XP_003634840.1| PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic [Vitis vinifera]

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/330 (77%), Positives = 284/330 (86%), Gaps = 4/330 (1%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           MA K +M AV+Y  YGGG AGL+H EVPVP P KDE LLK+EAAS+NP+DWK+QKGMLRP
Sbjct: 1   MAAK-LMRAVRYSGYGGGAAGLEHAEVPVPAPAKDEVLLKLEAASLNPVDWKIQKGMLRP 59

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVAR 117
             P KFP IP +DVAGEV+ +GS VK+FK GDKVV+VLS   GGGLAEFAVAK+++TV+R
Sbjct: 60  LFPCKFPHIPVTDVAGEVVEVGSGVKDFKAGDKVVSVLSHFSGGGLAEFAVAKKNITVSR 119

Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG 177
           P EVSAAEGAG+P AGLTAHQALTQ +G+ LDGSG QK+ILITAASG VG YAVQLAKLG
Sbjct: 120 PAEVSAAEGAGLPIAGLTAHQALTQVVGINLDGSGPQKSILITAASGGVGHYAVQLAKLG 179

Query: 178 NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237
           NTHVTATCGARNI+LVKSLGADEVLDYKTPDGAALKSPSGR +DAVI+C TGIPWSTFEP
Sbjct: 180 NTHVTATCGARNIDLVKSLGADEVLDYKTPDGAALKSPSGRTFDAVIHCATGIPWSTFEP 239

Query: 238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297
           NL T GKVID  P+   ++TFA KKLTFSKKQLVP  +SPK ENL+ LV LVKEGKLKTV
Sbjct: 240 NLSTNGKVIDITPNASAMVTFALKKLTFSKKQLVPLLLSPKKENLECLVGLVKEGKLKTV 299

Query: 298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           IDSKH LSKAEDAWAKSI G ATGKIIVEP
Sbjct: 300 IDSKHPLSKAEDAWAKSIDGHATGKIIVEP 329

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|378405612|gb|AFB82645.1| quinone oxidoreductase [Camellia sinensis]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 244/328 (74%), Positives = 275/328 (83%), Gaps = 4/328 (1%)

Query: 4   KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLP 63
           + +MHAVQYDSYGGG AGLKHVEVPVP P K E L+K+EAAS+NPIDWK+QKGMLRP  P
Sbjct: 3   RKLMHAVQYDSYGGGTAGLKHVEVPVPAPKKKEVLIKIEAASLNPIDWKIQKGMLRPLYP 62

Query: 64  RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVARPQE 120
            KFP +P +DVAGEV+ +GS V+NFK GDKVVA+LS   GGGLAEFAVAKESLTV RP+E
Sbjct: 63  WKFPHVPGTDVAGEVVEVGSGVENFKAGDKVVALLSDCTGGGLAEFAVAKESLTVPRPRE 122

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH 180
           VSAAEGAG+P A LTAH  LTQ LG+KLDG G +KN+L+TAASG VG YAVQLAKLGNTH
Sbjct: 123 VSAAEGAGLPLAALTAHHVLTQCLGIKLDGMGPRKNVLVTAASGGVGHYAVQLAKLGNTH 182

Query: 181 VTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLG 240
           VTATCGARN++ VKSLGADEVLDYKTPDGAAL+SPSG+KYD VI+  +GI WSTFEPNL 
Sbjct: 183 VTATCGARNMDFVKSLGADEVLDYKTPDGAALRSPSGQKYDVVIHGASGISWSTFEPNLN 242

Query: 241 TTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVP-FSVSPKGENLDFLVKLVKEGKLKTVID 299
             GKVI   PS   + TFA KKLTFSKKQ+ P   VS KGENLD+LVKLVKEGK+KT ID
Sbjct: 243 AKGKVIVLIPSASAMKTFALKKLTFSKKQMEPLLVVSKKGENLDYLVKLVKEGKIKTAID 302

Query: 300 SKHSLSKAEDAWAKSISGRATGKIIVEP 327
           SK+ L+KAEDAWAKSI G ATGKI+ EP
Sbjct: 303 SKYPLNKAEDAWAKSIDGHATGKILAEP 330

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
TAIR|locus:2123206	329	AT4G13010 [Arabidopsis thalian	0.996	0.990	0.742	2.8e-128
TIGR_CMR|BA_3566	332	BA_3566 "alcohol dehydrogenase	0.944	0.930	0.351	1.6e-40
TIGR_CMR|BA_3435	317	BA_3435 "alcohol dehydrogenase	0.938	0.968	0.318	1.2e-35
ZFIN|ZDB-GENE-040426-1314	387	rtn4ip1 "reticulon 4 interacti	0.681	0.576	0.352	3.8e-33
UNIPROTKB|Q0VC50	396	RTN4IP1 "Reticulon-4-interacti	0.669	0.553	0.358	1.6e-32
UNIPROTKB|F1RT47	396	LOC100627610 "Uncharacterized	0.669	0.553	0.358	5.5e-32
TIGR_CMR|CBU_1023	318	CBU_1023 "alcohol dehydrogenas	0.923	0.949	0.345	2e-31
UNIPROTKB|E2QRQ9	397	RTN4IP1 "Uncharacterized prote	0.669	0.551	0.352	4.8e-31
TAIR|locus:2034802	386	AOR "alkenal/one oxidoreductas	0.896	0.759	0.346	5.4e-31
UNIPROTKB|F1NL88	390	RTN4IP1 "Uncharacterized prote	0.584	0.489	0.375	2e-30

TAIR|locus:2123206 AT4G13010 [Arabidopsis thaliana (taxid:3702)]

 Score = 1259 (448.2 bits), Expect = 2.8e-128, P = 2.8e-128
 Identities = 245/330 (74%), Positives = 277/330 (83%)

Query:     1 MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
             MAGK +MHA+QY+SYGGG AGL+HV+VPVPTP  +E  LK+EA S+NP+DWK+QKGM+RP
Sbjct:     1 MAGK-LMHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRP 59

Query:    61 FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVAR 117
             FLPRKFP IPA+DVAGEV+ +GS VKNFK GDKVVAVLS   GGGLAEFAVA E LTV R
Sbjct:    60 FLPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLGGGGLAEFAVATEKLTVKR 119

Query:   118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG 177
             PQEV AAE A +P AGLTA QALT   G+KLDG+G++ NIL+TAASG VG YAVQLAKL 
Sbjct:   120 PQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLA 179

Query:   178 NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP 237
             N HVTATCGARNIE VKSLGADEVLDYKTP+GAALKSPSG+KYDAV++C  GIP+S FEP
Sbjct:   180 NAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEP 239

Query:   238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297
             NL   GKVID  P P  + T+A KK+T SKKQLVP  + PK ENL+F+V LVKEGK+KTV
Sbjct:   240 NLSENGKVIDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTV 299

Query:   298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
             IDSKH LSKAEDAWAKSI G ATGKIIVEP
Sbjct:   300 IDSKHPLSKAEDAWAKSIDGHATGKIIVEP 329

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0005794 "Golgi apparatus" evidence=RCA

TIGR_CMR|BA_3566 BA_3566 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 120/341 (35%), Positives = 178/341 (52%)

Query:     7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
             M A+  D YG     ++  EVP+P  N+ E L ++ AASINPID+K++ G ++  L  + 
Sbjct:     1 MKAMIIDKYGK--VPMRMAEVPIPEINEHEVLAEIHAASINPIDFKIRDGKVKMLLKYEM 58

Query:    67 PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG---GGLAEFAVAKESLTVARPQEVSA 123
             P I  +D AG +I +GS+V  FK+GD++ A       G  AE+    E     +P+ +S 
Sbjct:    59 PLILGNDFAGVIIKVGSKVTRFKIGDEIYARPRKNKIGTFAEYIAIHEDDIALKPKNLSF 118

Query:   124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA 183
              E A IP  GLT++QAL   + ++ D    QK ILI A SG VG +A+QLAK+    VT 
Sbjct:   119 EEAASIPLVGLTSYQALHDIMQLQKD----QK-ILIHAGSGGVGTFAIQLAKIMGATVTT 173

Query:   184 TCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243
             T      +LVKSLGAD++++YKT     +     + YDAV + + G         + + G
Sbjct:   174 TASEAGPDLVKSLGADQIINYKTEKFEEIL----KDYDAVFDTIGGTTLEKSFDIIKSGG 229

Query:   244 KVIDFN--PSPRV------------LLTFAWKKLT-FSKKQLVPFS---VSPKGENLDFL 285
              ++  +  P+ R             L + A KKLT   KK    +S   + P G+ L  +
Sbjct:   230 NIVSVSGIPNARFSKEFGSGFFKTFLFSLASKKLTALEKKHNAQYSFLFMKPSGDQLRTI 289

Query:   286 VKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
                ++ GK+K VID       A+ A   S +GRA GKIIV+
Sbjct:   290 ANYIEAGKIKPVIDRVFPFEDAQKAMEYSEAGRAKGKIIVK 330

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|BA_3435 BA_3435 "alcohol dehydrogenase, zinc-containing" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 104/327 (31%), Positives = 163/327 (49%)

Query:     7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
             M A+    YG     L+ +E+  P    ++ L++V AA +NP+DWK+++G+L+  +   F
Sbjct:     1 MKAIGLTQYGDKSV-LQEIEMQTPLLGDNDVLIEVYAAGVNPVDWKIREGLLQDVISYDF 59

Query:    67 PFIPASDVAGEVIGLGSEVKNFKVGDKVVA---VLSGGGLAEFAVAKESLTVARPQEVSA 123
             P +   DVAG V  +G  V  FKVGD+V +   +   G  AE+    E     +P+ +S 
Sbjct:    60 PLVLGWDVAGVVAAIGKNVTVFKVGDEVYSRPDIERNGTYAEYVAVDEKYVAKKPRNLSF 119

Query:   124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA 183
              E A IP  GLT+ Q+L +   V+    G +  +LI A SG +G +A+QLAK    HV  
Sbjct:   120 EEAASIPLVGLTSWQSLVKFANVQ---KGNK--VLIHAGSGGIGTFAIQLAKSFGAHVAT 174

Query:   184 TCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243
             T   +N++ VK LGAD V+DYKT D + L       +D +   V    +    PN    G
Sbjct:   175 TTSTKNMQFVKDLGADTVVDYKTEDFSLLLHNYNIVFDVLGGDVLKDSYKVLAPN----G 230

Query:   244 KVID-FNPSP-RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSK 301
             K+   + P    +  T   ++       +  F+  P G  L  + +L++ GK+K V+   
Sbjct:   231 KLASIYGPKGMEIPQTEISREKNIESDHI--FT-EPNGYELSLITELIEGGKIKPVVTHV 287

Query:   302 HSL--SKAEDAWAKSISGRATGKIIVE 326
               L     + A   S S RA GKI+++
Sbjct:   288 LPLHVEGVKKAHHISESERARGKIVLK 314

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

ZFIN|ZDB-GENE-040426-1314 rtn4ip1 "reticulon 4 interacting protein 1" [Danio rerio (taxid:7955)]

 Score = 298 (110.0 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
 Identities = 87/247 (35%), Positives = 125/247 (50%)

Query:     2 AGKAVMHAVQYDSYGGG--VAGLKHVEVPV-PTPNKDEALLKVEAASINPIDWKLQKG-- 56
             A + VM A   D YG    +   K+  +P+   PN  E ++KV AA +NPID  ++ G  
Sbjct:    24 ARRTVMPAWVIDKYGKNDVLRFTKNAALPIIHYPN--EVVVKVHAAGLNPIDISMRGGYG 81

Query:    57 -----MLRPFLP-----RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL---SGGGL 103
                  M R  L       +FP I   DV+GE++  G +VK FK GD+V A +     G L
Sbjct:    82 AATMAMKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIPPWKQGSL 141

Query:   104 AEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS 163
             AEF V   +    +P+ +   E A IP    TA  A+  + G+  D S + K +LI   S
Sbjct:   142 AEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAK-KRVLILGGS 200

Query:   164 GAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKT-PDGAALKSPSGRKYDA 222
             G VG +A+Q+ K    HVT TC      LV+ LGAD+V+DY   P    LK+    K+D 
Sbjct:   201 GGVGTFAIQMVKAWGAHVTVTCSQNAERLVRDLGADDVVDYTAGPVEKQLKNLE--KFDL 258

Query:   223 VINCVTG 229
             +++ + G
Sbjct:   259 ILDSIGG 265

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q0VC50 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 293 (108.2 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
 Identities = 87/243 (35%), Positives = 130/243 (53%)

Query:     6 VMHAVQYDSYGGG--VAGLKHVEVP-VPTPNKDEALLKVEAASINPIDWKLQKG------ 56
             VM A   D YG    +   +++ +P +  PN  E ++KV AASINPID  ++ G      
Sbjct:    42 VMPAWVIDKYGSNEVLRFTQNMMIPMIHYPN--EVIIKVHAASINPIDVNMRSGYGATAL 99

Query:    57 -MLRPFLPRK-----FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL---SGGGLAEFA 107
              M R  L  K     FP     DV+G V+  G +V+ FK GD+V A +     G L+EF 
Sbjct:   100 NMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWKQGTLSEFV 159

Query:   108 VAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG 167
             V   +    +P+ ++  + A +P   LTA  A+ +  G+  D +   K +LI  ASG VG
Sbjct:   160 VVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLN-DRNCTGKRVLILGASGGVG 218

Query:   168 LYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINC 226
              +A+Q+ K  + HVTA C     ELV+ LGAD+V+DYK+ +  A LKS   + +D +++ 
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKS--SKPFDFILDN 276

Query:   227 VTG 229
             V G
Sbjct:   277 VGG 279

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1RT47 LOC100627610 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 288 (106.4 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
 Identities = 87/243 (35%), Positives = 131/243 (53%)

Query:     6 VMHAVQYDSYGGG--VAGLKHVEVP-VPTPNKDEALLKVEAASINPIDWKLQKG------ 56
             VM A   D YG    +   +++ +P +  PN  E ++KV AASINPID  ++ G      
Sbjct:    42 VMPAWVIDKYGNNEVLRFTQNMMLPMIHYPN--EVVIKVHAASINPIDVNMRSGYGATAL 99

Query:    57 -MLR-PFLPR----KFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL---SGGGLAEFA 107
              M R P   R    +FP     DV+G V+  G +VK FK GD+V A +     G L+EF 
Sbjct:   100 NMKRDPLHIRIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFV 159

Query:   108 VAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG 167
             V   +    +P+ ++  + A +P   LTA  A+ +  G+  D + + K +LI  ASG VG
Sbjct:   160 VVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLN-DKNCRGKRVLILGASGGVG 218

Query:   168 LYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINC 226
              +A+Q+ K  + HVTA C     ELV+ LGAD+V+DYK+ +    LKS   + +D +++ 
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNMEEQLKS--FKPFDFILDN 276

Query:   227 VTG 229
             V G
Sbjct:   277 VGG 279

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

TIGR_CMR|CBU_1023 CBU_1023 "alcohol dehydrogenase, zinc-containing" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 113/327 (34%), Positives = 164/327 (50%)

Query:     7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKG--MLRPFLPR 64
             M A+Q+D +G     LK V+ P P   K++ L+KV AAS+NPID+K + G   +   L  
Sbjct:     4 MKAIQFDQFGPPKV-LKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKN 62

Query:    65 KFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGG----LAEFAVAKESLTVARPQE 120
               P     D +GEVI LGS+V N  +GDKV+ +          AE+  A     + + ++
Sbjct:    63 NLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEK 122

Query:   121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH 180
             +S  + A +P AGLTA QAL Q+  VK     Q   +LI A +G VG  A+QLAK   T 
Sbjct:   123 LSFLQAASLPTAGLTALQALNQA-EVK-----QGDVVLIHAGAGGVGHLAIQLAKQKGTT 176

Query:   181 VTATCGARNIELVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVINCVTGIPWSTFEPNL 239
             V  T   RN   +K+LGA++ ++Y   D   A+ +P     DAVI+ V G         L
Sbjct:   177 VITTASKRNHAFLKALGAEQCINYHEEDFLLAISTP----VDAVIDLVGGDVGIQSIDCL 232

Query:   240 GTTGKVIDFNP--SPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV 297
               TG ++      + RV+   A +K   +   L  F++    E L +L KLV E KL+  
Sbjct:   233 KETGCIVSVPTITAGRVI-EVAKQKHRRAFGLLKQFNI----EELHYLGKLVSEDKLRIE 287

Query:   298 IDSKHSLSKAEDAWAKSISGRATGKII 324
             I     LS+A  A     +G   GK++
Sbjct:   288 ISRIFQLSEAVTAHELLETGHVRGKLV 314

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

UNIPROTKB|E2QRQ9 RTN4IP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 275 (101.9 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
 Identities = 86/244 (35%), Positives = 129/244 (52%)

Query:     6 VMHAVQYDSYGGG--VAGLKHVEVPV-PTPNKDEALLKVEAASINPIDWKLQKG------ 56
             VM A   D YG    +   +++ +PV   PN  E ++KV AAS+NPID  ++ G      
Sbjct:    42 VMPAWVIDKYGKNEVLRFTQNMMIPVIHYPN--EVIIKVHAASVNPIDVNMRSGYGATAL 99

Query:    57 -MLRPFLPRK-----FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL---SGGGLAEFA 107
              M R  L  K     FP     DV+G V+  G +V+ FK GD+V A +     G L+EF 
Sbjct:   100 NMKRDPLHIKTKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWKQGTLSEFV 159

Query:   108 VAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG 167
             V   +    +P+ ++  + A +P   LTA  A+ +  G+  D +   K +LI  ASG VG
Sbjct:   160 VVNGNEVSLKPKSLTHTQAASLPYVALTAWSAINKVGGLN-DKNCTGKRVLILGASGGVG 218

Query:   168 LYAVQ-LAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVIN 225
              +A+Q + K  + HVTA C     ELV+ LGAD+V+DYK+ +    LKS   + +D +++
Sbjct:   219 TFAIQQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEEQLKSL--KPFDFILD 276

Query:   226 CVTG 229
              V G
Sbjct:   277 NVGG 280

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

TAIR|locus:2034802 AOR "alkenal/one oxidoreductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 116/335 (34%), Positives = 167/335 (49%)

Query:     7 MHAVQYDSYGGGVAGLK-HVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRK 65
             M A  Y  YGG V  LK    + VP   +D+ L+KV AA++NP+D K ++G  +      
Sbjct:    78 MKAWVYSDYGG-VDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKA-TDSP 135

Query:    66 FPFIPASDVAGEVIGLGSEVKNFKVGDKVVA-----VLSG----GGLAEFAVAKESLTVA 116
              P +P  DVAG V+ +GS VK+ K GD+V A      L G    G LAE+   +E L   
Sbjct:   136 LPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLAL 195

Query:   117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK- 175
             +P+ +  A+ AG+P A  TA + L     V+ + S   K+IL+   +G VG   +QLAK 
Sbjct:   196 KPKNIDFAQAAGLPLAIETADEGL-----VRTEFSAG-KSILVLNGAGGVGSLVIQLAKH 249

Query:   176 -LGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWST 234
               G + V AT     +ELV+SLGAD  +DY   +   L  P   KYD V + + G+    
Sbjct:   250 VYGASKVAATASTEKLELVRSLGADLAIDYTKENIEDL--PD--KYDVVFDAI-GMCDKA 304

Query:   235 FEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL 294
              +  +   GKV        V LT A     F       F V+  G+ L  L   ++ GK+
Sbjct:   305 VKV-IKEGGKV--------VALTGAVTPPGFR------FVVTSNGDVLKKLNPYIESGKV 349

Query:   295 KTVIDSK--HSLSKAEDAWAKSISGRATGKIIVEP 327
             K V+D K     S+  DA++   +  ATGK++V P
Sbjct:   350 KPVVDPKGPFPFSRVADAFSYLETNHATGKVVVYP 384

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA;IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0010319 "stromule" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0035671 "enone reductase activity" evidence=IDA

GO:0035798 "2-alkenal reductase (NADP+) activity" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

UNIPROTKB|F1NL88 RTN4IP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 268 (99.4 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
 Identities = 81/216 (37%), Positives = 114/216 (52%)

Query:    32 PNKDEALLKVEAASINPIDWKLQKG-------MLR-PF----LPRKFPFIPASDVAGEVI 79
             PN  E ++KV AAS+NPID  ++ G       M R P     +  +FP     D +G ++
Sbjct:    62 PN--EVIVKVHAASLNPIDLSMRSGYGATALNMKRDPLKIKSMDTEFPLTLGRDASGVIM 119

Query:    80 GLGSEVKNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTA 136
               G  V  FK GD+V A +     G L+EF VA  +    +P+ +S  E A +P  GLTA
Sbjct:   120 ECGLSVSYFKPGDEVWAAIPPWKQGTLSEFVVASANEVSFKPKCLSHVEAASLPYVGLTA 179

Query:   137 HQALTQSLGVKLDG-SGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKS 195
               A+ +  G+     SG  K +LI  ASG VG +AVQL K    HVTA C      L++ 
Sbjct:   180 WSAINKVGGLNQSNCSG--KRVLILGASGGVGTFAVQLVKAWGAHVTAVCSHDAGTLMRK 237

Query:   196 LGADEVLDYKTPD-GAALKS-PSGRKYDAVINCVTG 229
             LGAD+V+DYK+      LK+ PS   +D +++ V G
Sbjct:   238 LGADDVIDYKSGSLEQQLKTLPS---FDFILDNVGG 270

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7T3C7	RT4I1_DANRE	No assigned EC number	0.3066	0.9724	0.8217	yes	no
Q8H0M1	QORH_SPIOL	1, ., -, ., -, ., -	0.7151	0.9969	0.9908	N/A	no
Q924D0	RT4I1_MOUSE	No assigned EC number	0.3093	0.9785	0.8080	yes	no
Q9SV68	QORH_ARATH	1, ., -, ., -, ., -	0.7424	0.9969	0.9908	yes	no
O42909	YBI2_SCHPO	1, ., -, ., -, ., -	0.3279	0.8685	0.8184	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00012014 SubName- Full=Putative uncharacterized protein; (335 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	327
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	1e-120
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	1e-92
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	6e-73
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	9e-70
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-59
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	2e-56
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	5e-54
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	8e-50
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	9e-50
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	3e-45
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	8e-45
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	2e-44
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	1e-43
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-42
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-41
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	9e-40
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	2e-38
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	3e-38
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	6e-38
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-37
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	6e-35
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	7e-35
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	2e-34
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	2e-34
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	3e-33
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	4e-33
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-32
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	3e-30
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	2e-29
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	3e-29
smart00829	287	smart00829, PKS_ER, Enoylreductase	2e-28
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-27
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	4e-27
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	4e-27
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-26
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	6e-26
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-25
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	2e-25
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	7e-25
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	7e-25
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	1e-24
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	2e-24
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	1e-23
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	3e-22
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	5e-21
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-20
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	4e-20
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	6e-20
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	1e-19
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	3e-19
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	7e-19
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	2e-17
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	5e-17
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	6e-17
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	1e-16
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-16
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	6e-16
cd05281	341	cd05281, TDH, Threonine dehydrogenase	9e-16
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	3e-15
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-14
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	5e-14
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	6e-14
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	3e-13
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	7e-13
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-12
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	2e-12
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	3e-12
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	4e-12
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	4e-12
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	2e-11
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	4e-11
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	5e-11
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	6e-10
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	6e-10
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	7e-10
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	1e-09
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	3e-09
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	3e-09
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	5e-09
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	2e-08
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	2e-08
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	2e-08
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	2e-08
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	3e-08
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	8e-08
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	8e-08
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	3e-07
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	4e-07
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	7e-07
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-06
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-06
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	2e-06
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	1e-05
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	4e-05
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	5e-05
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	6e-05
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	2e-04
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-04
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	5e-04
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	0.001
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	0.001
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	0.001
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	0.003
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	0.004

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  348 bits (896), Expect = e-120
 Identities = 148/325 (45%), Positives = 189/325 (58%), Gaps = 15/325 (4%)

Query: 10  VQYDSYGGG-VAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPF 68
           V Y  YG   V  L  VEVP+PTP   E L+KV AAS+NP+DWKL++G  +  L R FP 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 69  IPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVARPQEVSAAE 125
           IP  D AGEV+ +GS V  FKVGD+V   L    GG LAE+ VA ES    +P+ VS  E
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEE 120

Query: 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC 185
            A +P AGLTA QAL  +  VK    GQ   +LI  ASG VG +AVQ+AK    HVT  C
Sbjct: 121 AAALPVAGLTALQALRDAGKVK---PGQ--RVLINGASGGVGTFAVQIAKALGAHVTGVC 175

Query: 186 GARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTT--G 243
             RN ELV+SLGADEV+DY T D  AL +  G KYD + + V   P+S +  +L     G
Sbjct: 176 STRNAELVRSLGADEVIDYTTEDFVAL-TAGGEKYDVIFDAVGNSPFSLYRASLALKPGG 234

Query: 244 KVIDFNPSPRVLLT---FAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDS 300
           + +     P  LL         L    ++L  F   P  E+L+ L +LV+EGKLK VIDS
Sbjct: 235 RYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDS 294

Query: 301 KHSLSKAEDAWAKSISGRATGKIIV 325
            + L  A +A+ +  SGRA GK+++
Sbjct: 295 VYPLEDAPEAYRRLKSGRARGKVVI 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  277 bits (711), Expect = 1e-92
 Identities = 120/322 (37%), Positives = 168/322 (52%), Gaps = 16/322 (4%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV+   YGG    L+  +VP P P   E L+KV AA +NP+D K+++G+L+   P   
Sbjct: 1   MKAVRIHEYGG-PEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTL 59

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVARPQEVSA 123
           P IP  DVAG V+ +G  V  FKVGD+V  +     GG  AE+ V        +P  +S 
Sbjct: 60  PLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSF 119

Query: 124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA 183
            E A +P AGLTA QAL +  G+K   +GQ   +LI  A+G VG +AVQLAK     V A
Sbjct: 120 EEAAALPLAGLTAWQALFELGGLK---AGQ--TVLIHGAAGGVGSFAVQLAKARGARVIA 174

Query: 184 TCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243
           T  A N + ++SLGADEV+DY   D     +P G   DAV++ V G   +     +   G
Sbjct: 175 TASAANADFLRSLGADEVIDYTKGDFERAAAPGG--VDAVLDTVGGETLARSLALVKPGG 232

Query: 244 KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHS 303
           +++     P      A +       +     V P GE L  L +LV+ GKL+ V+D    
Sbjct: 233 RLVSIAGPP-----PAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFP 287

Query: 304 LSKAEDAWAKSISGRATGKIIV 325
           L  A +A  +  SG A GK+++
Sbjct: 288 LEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  228 bits (582), Expect = 6e-73
 Identities = 119/337 (35%), Positives = 171/337 (50%), Gaps = 27/337 (8%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV  + +GG    LK VEVP P P   E L++V+AA +NPID  +++G+  P   R  
Sbjct: 1   MKAVVVEEFGGPEV-LKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPP--VRPL 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVA---VLSGGGLAEFAVAKESLTVARPQEVSA 123
           PFIP S+ AG V+ +GS V  FKVGD+V A   V   GG AE+ V      V  P  +S 
Sbjct: 58  PFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSF 117

Query: 124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHVT 182
            E A +P AGLTA  AL    G+K   +     +L+  A+G VG  A+QLAK LG T V 
Sbjct: 118 EEAAALPLAGLTAWLALFDRAGLKPGET-----VLVHGAAGGVGSAAIQLAKALGATVVA 172

Query: 183 ATCGARNIELVKSLGADEVLDYKTPD-GAALKSPS-GRKYDAVINCVTGIPWSTFEPN-- 238
               +  +EL+K LGAD V++Y+  D    ++  + G+  D V++ V G    TF  +  
Sbjct: 173 VVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGG---DTFAASLA 229

Query: 239 -LGTTGKVIDF-NPSPRVLLTFAWKKLTFSKKQLVPFSVSP-----KGENLDFLVKLVKE 291
            L   G+++     S    +      L   +  L   ++         E L  L  L+  
Sbjct: 230 ALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLAS 289

Query: 292 GKLKTVIDSKHSLSKAEDAWAKSIS-GRATGKIIVEP 327
           GKLK VID  + L++A  A A  +   R TGK++++ 
Sbjct: 290 GKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  220 bits (563), Expect = 9e-70
 Identities = 120/353 (33%), Positives = 167/353 (47%), Gaps = 38/353 (10%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNK-DEALLKVEAASINPIDWKLQKGMLRPFLPRK 65
           M A Q  SYGG  + L      +P   K ++ L+KV AAS+NPID  ++ G  R  L +K
Sbjct: 1   MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKK 60

Query: 66  ------------FPFIPASDVAGEVIGLGSEVKNFKVGDKV---VAVLSGGGLAEFAVAK 110
                       FP     D +G V+ +GS VK+F++GD+V   V   S G  AE+ V  
Sbjct: 61  RKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVP 120

Query: 111 ESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYA 170
           E+    +P+ +S  E A +P AGLTA  AL    G+    +   K +LI   SG VG +A
Sbjct: 121 ENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNA-AGKRVLILGGSGGVGTFA 179

Query: 171 VQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG- 229
           +QL K    HVT TC    I LVKSLGAD+V+DY   D     +  G K+D +++ V G 
Sbjct: 180 IQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERG-KFDVILDTVGGD 238

Query: 230 -IPWSTFEPNLGTTGKVIDFNPS----------PRVLLTFAWKKL-----TFSKKQLVPF 273
              W+     L   G  +                  +L  A   L     +  K     +
Sbjct: 239 TEKWAL--KLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRW 296

Query: 274 S-VSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
              SP G  LD L KLV++GK+K VID      +  +A+ K  SG A GK ++
Sbjct: 297 GFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVI 349

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  193 bits (493), Expect = 2e-59
 Identities = 111/348 (31%), Positives = 163/348 (46%), Gaps = 36/348 (10%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
             A      GGG+  L  V+VPVP P  DE L+KV+A ++NP+DWK Q     P     +
Sbjct: 1   QKAAVLTGPGGGL--LVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIP----SY 54

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG--------GGLAEFAVAKESLTVARP 118
           P I   D AG V+ +GS V  FKVGD+V   + G        G   E+ VA   LT   P
Sbjct: 55  PAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIP 114

Query: 119 QEVSAAEGAGIPCAGLTAHQALTQSLGVKLD-----GSGQQKNILITAASGAVGLYAVQL 173
             +S  E A +P   +TA  AL Q LG+ L       + + K +LI   S +VG  A+QL
Sbjct: 115 DNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQL 174

Query: 174 AKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPW 232
           AKL    V  T   +N +LVKSLGAD V DY  PD    +++ +G K    ++C++    
Sbjct: 175 AKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPES 234

Query: 233 STF-----EPNLGTTGKVIDFNPSP-----RVLLTFAWKKLTFSKKQLVPFSVSPKGENL 282
           +         + G  GK++   P P     R  +   +  L ++    +P          
Sbjct: 235 AQLCAEALGRSGG--GKLVSLLPVPEETEPRKGVKVKF-VLGYTVFGEIPEDREFGEVFW 291

Query: 283 DFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATG-KIIVEP 327
            +L +L++EGKLK   V   +  L   ++       G+ +G K++V  
Sbjct: 292 KYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  185 bits (472), Expect = 2e-56
 Identities = 88/228 (38%), Positives = 121/228 (53%), Gaps = 14/228 (6%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A      G  +  L   E+ +P P   E L+KV AA +NP+DWK+       +    +
Sbjct: 1   MKAWVLPKPGAALQ-LTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW---SY 56

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVV---AVLSGGGLAEFAVAKESLTVARPQEVSA 123
           P +P  D AG V+ +G++V  +KVGD+V    ++  GG  AE+ V      +  P  +S 
Sbjct: 57  PHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSF 116

Query: 124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA 183
            E A +PCAGLTA+QAL + L ++       + ILIT  +G VG +AVQLAK     V  
Sbjct: 117 EEAAALPCAGLTAYQALFKKLRIE-----AGRTILITGGAGGVGSFAVQLAKRAGLRVIT 171

Query: 184 TCGARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTG 229
           TC  RN E VKSLGAD V+DY   D      +   GR  DAV++ V G
Sbjct: 172 TCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGG 219

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  179 bits (456), Expect = 5e-54
 Identities = 101/340 (29%), Positives = 152/340 (44%), Gaps = 34/340 (10%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A++Y  +G     L+  ++PVPTP   E L++V A+ +NP+D  ++ G   P LP   
Sbjct: 1   MRAIRYHEFGAPDV-LRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGA-YPGLP-PL 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG-----GGLAEFAVAKESLTVARPQEV 121
           P++P SD AG V  +G  V   KVGD+V     G     G  AE+ V      V  P  V
Sbjct: 58  PYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGV 117

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV 181
           S  +GA +    LTA++AL    G K       + +L+   SGAVG  AVQLA+     V
Sbjct: 118 SFEQGAALGIPALTAYRALFHRAGAKAG-----ETVLVHGGSGAVGHAAVQLARWAGARV 172

Query: 182 TATCG-ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPN 238
            AT   A   ELV+  GAD V +Y+  D A   L + +G+  D +I             N
Sbjct: 173 IATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIE-------VLANVN 225

Query: 239 LGTTGKVIDFN------PSPRVLLTFAWKKLTFSKKQLVPFSVS-----PKGENLDFLVK 287
           L     V+          S  +  T     L   +  +    +       +    + +  
Sbjct: 226 LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAA 285

Query: 288 LVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
            + +G L+ VI  ++ L +A  A     SG A GK++++P
Sbjct: 286 GLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  168 bits (427), Expect = 8e-50
 Identities = 107/341 (31%), Positives = 158/341 (46%), Gaps = 40/341 (11%)

Query: 7   MHAVQYDSYGG-GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQ-KGMLRPFLPR 64
           M A+     GG  V  L+  EVP P P   E L++V AA +N  D  LQ +G+  P  P 
Sbjct: 1   MKAIVIKEPGGPEV--LELGEVPKPAPGPGEVLIRVAAAGVNRAD-LLQRQGLYPP--PP 55

Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAA 124
               I   +VAG V+ +G  V  +KVGD+V A+L+GGG AE+ V      +  P+ +S  
Sbjct: 56  GASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLV 115

Query: 125 EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTAT 184
           E A +P    TA Q L Q  G+K   +G+   +LI   +  VG  A+QLAK     V AT
Sbjct: 116 EAAALPEVFFTAWQNLFQLGGLK---AGE--TVLIHGGASGVGTAAIQLAKALGARVIAT 170

Query: 185 CG-ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNLGT 241
            G    +E  ++LGAD  ++Y+T D A    ++  GR  D +++ V G        NL  
Sbjct: 171 AGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGG---DYLARNLRA 227

Query: 242 -------------TGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVK- 287
                         G   + + +P  LL    K+LT +   L   S+  K        + 
Sbjct: 228 LAPDGRLVLIGLLGGAKAELDLAP--LLR---KRLTLTGSTLRSRSLEEKAALAAAFREH 282

Query: 288 ---LVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
              L   G+++ VID    L +A +A  +  S    GKI++
Sbjct: 283 VWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  168 bits (427), Expect = 9e-50
 Identities = 104/336 (30%), Positives = 157/336 (46%), Gaps = 27/336 (8%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A+  +S+GG     +  EVP P P   + L++V A+ +NP+D K+++G          
Sbjct: 1   MKALVLESFGGP-EVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGA--AARPPL 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG-----GGLAEFAVAKESLTVARPQEV 121
           P I   DVAG V  +G  V  F+VGD+V     G     G LAE+AV    L   +P  +
Sbjct: 58  PAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANL 117

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV 181
           S  E A +P  G+TA + L     V+   +GQ   +LI   +G VG  AVQLAK     V
Sbjct: 118 SMREAAALPLVGITAWEGLVDRAAVQ---AGQT--VLIHGGAGGVGHVAVQLAKAAGARV 172

Query: 182 TATCGARNIELVKSLGADEVLDYK-TPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLG 240
            AT  +      +SLGAD ++ Y+ T      +   GR +D V + V G    T + +  
Sbjct: 173 YATASSEKAAFARSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVGG---ETLDASFE 229

Query: 241 TT---GKVIDFNPSPRVLLTFAWKK-LTFS-----KKQLVPFSVSPKGENLDFLVKLVKE 291
                G+V+         L     +  T+S        L     +  GE L    +LV+ 
Sbjct: 230 AVALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVER 289

Query: 292 GKLKTVIDSKH-SLSKAEDAWAKSISGRATGKIIVE 326
           G+L+ ++D +   L +A  A A+  SG A GKI+++
Sbjct: 290 GQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVID 325

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  156 bits (396), Expect = 3e-45
 Identities = 107/344 (31%), Positives = 156/344 (45%), Gaps = 45/344 (13%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNK-DEALLKVEAASINPIDWKLQKGM--LRPFLP 63
           M AV     GG    L   EVP P P    E  ++VEAA +N  D  + +G   ++P   
Sbjct: 1   MKAVVCKELGG-PEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKP--- 55

Query: 64  RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSA 123
              PF+P S+VAG V  +G  V  FKVGD+VVA+   GG AE  V   +     P  +S 
Sbjct: 56  -PLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSF 114

Query: 124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA 183
            E A +P    TA+ AL +   ++    G+   +L+  A+G VGL AVQLAK     V A
Sbjct: 115 EEAAALPVTYGTAYHALVRRARLQ---PGE--TVLVLGAAGGVGLAAVQLAKALGARVIA 169

Query: 184 TCG-ARNIELVKSLGADEVLDYKTPD-GAALKSPSGRK-YDAVINCVTGIPWSTFEPNLG 240
                  + L ++LGAD V+DY+ PD    +K+ +G +  D V + V G     FE +L 
Sbjct: 170 AASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGG---DVFEASLR 226

Query: 241 TTGK-----VIDFN----PSPRVLLT---------FAWKKLTFSKKQLVPFSVSPKGENL 282
           +        VI F     P     L            W      + +L+         NL
Sbjct: 227 SLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELL-------RANL 279

Query: 283 DFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
             L  L+ EGK++  + +   L +A +A       +ATGK+++ 
Sbjct: 280 AELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  155 bits (395), Expect = 8e-45
 Identities = 103/356 (28%), Positives = 153/356 (42%), Gaps = 49/356 (13%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV    +GG    L++ ++P P P  DE L++V+AA++N +D  +++GM  P +    
Sbjct: 1   MKAVVIRGHGGPEV-LEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGM--PGIKLPL 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVV-----------AVLSG--------------- 100
           P I  SD AG V  +G  V N K G +VV             L+G               
Sbjct: 58  PHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHV 117

Query: 101 -GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI 159
            GG AE+        +  P  +S  E A  P   LTA   L     ++    G+   +L+
Sbjct: 118 DGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLR---PGET--VLV 172

Query: 160 TAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPS 216
             A   VG  A+Q+AKL    V AT G    +E  K LGAD V+DY+  D      +   
Sbjct: 173 HGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTG 232

Query: 217 GRKYDAVINCVTGIPWSTFEPNLGTTGKVIDF----NPSPRVLLTFA-WKKLTFSKKQLV 271
            R  D V+  V    W     +L   G+++           + L    W++L+     + 
Sbjct: 233 KRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMG 292

Query: 272 PFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
             +       LD  ++LV  GKLK VIDS   L +A +A  +  S    GKI++ P
Sbjct: 293 TKA------ELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  154 bits (391), Expect = 2e-44
 Identities = 104/335 (31%), Positives = 148/335 (44%), Gaps = 30/335 (8%)

Query: 8   HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFP 67
            AV+    GG    L++ +VPVP P   E L++  A  +N ID   + G+     P   P
Sbjct: 1   KAVRIHKTGG-PEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLY----PLPLP 55

Query: 68  FIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGA 127
           F+   + AG V  +G  V  FKVGD+V      G  AE+ V   S  V  P  +S    A
Sbjct: 56  FVLGVEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAA 115

Query: 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG- 186
            +   GLTAH  L ++  VK    G    +L+ AA+G VGL   Q AK     V  T   
Sbjct: 116 ALLLQGLTAHYLLRETYPVK---PGDT--VLVHAAAGGVGLLLTQWAKALGATVIGTVSS 170

Query: 187 ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNLGTT-- 242
               EL ++ GAD V++Y+  D      +   GR  D V + V      TFE +L +   
Sbjct: 171 EEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGK---DTFEGSLDSLRP 227

Query: 243 -GKVIDF-NPSPRV----LLTFAWKKLTFSKKQLVPFSVSPKGENLDF----LVKLVKEG 292
            G ++ F N S  V    LL  +   L  ++  L  +  +   E L      L   V  G
Sbjct: 228 RGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATR--EELLARAAELFDAVASG 285

Query: 293 KLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           KLK  I  ++ L+ A  A     S + TGK+++ P
Sbjct: 286 KLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  152 bits (386), Expect = 1e-43
 Identities = 94/336 (27%), Positives = 146/336 (43%), Gaps = 32/336 (9%)

Query: 17  GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAG 76
           GG+  LK  +  +P P+  E  ++VEA  +N  D   ++G+       K PF+P  + AG
Sbjct: 9   GGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAP--KPPFVPGFECAG 66

Query: 77  EVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTA 136
            V  +G  VK+FKVGD+V+ +   GG AE            P  +S  E A  P   LTA
Sbjct: 67  TVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTA 126

Query: 137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHVTATCGARNIELVKS 195
           + AL +   ++       +++L+ +A+G VGL A QL K + N  V  T  A   E +K 
Sbjct: 127 YYALFELGNLRPG-----QSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTASASKHEALKE 181

Query: 196 LGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDF------ 248
            G   V+DY+T D    +K  S    D V++ + G         L   G+++ +      
Sbjct: 182 NGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLV 241

Query: 249 NPSPRVLLTFAWKKLTFSKKQLV----------------PFSVSPKG-ENLDFLVKLVKE 291
               R     A K     K   +                 F       E +D L+KL +E
Sbjct: 242 TGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEE 301

Query: 292 GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           GK+K  IDS     +  +A  +  S +  GK+++ P
Sbjct: 302 GKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  147 bits (373), Expect = 2e-42
 Identities = 71/217 (32%), Positives = 96/217 (44%), Gaps = 33/217 (15%)

Query: 36  EALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVV 95
           E L++VEAA +   D  +++G   P  P K P I   + AG V+ +G  V   KVGD+VV
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPP--PPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVV 58

Query: 96  AVLSG-----------------------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCA 132
            + +                        GG AE+ V      V  P  +S  E A +P  
Sbjct: 59  VLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEP 118

Query: 133 GLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIE 191
             TA+ AL ++  +K         +L+  A G VGL A QLAK     V  T      +E
Sbjct: 119 LATAYHALRRAGVLKPG-----DTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLE 172

Query: 192 LVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCV 227
           L K LGAD V+DYK  D    L+   G   D VI+ V
Sbjct: 173 LAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAV 209

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  147 bits (373), Expect = 1e-41
 Identities = 112/353 (31%), Positives = 156/353 (44%), Gaps = 68/353 (19%)

Query: 16  GGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVA 75
           GGG+  LK VE PVP P   E L++V A S+N  D  +  G   P  P K P IP SD A
Sbjct: 9   GGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPP--PVKDPLIPLSDGA 66

Query: 76  GEVIGLGSEVKNFKVGDKVVA------------------VLSG---GGLAEFAVAKESLT 114
           GEV+ +G  V  FKVGD+VV                    L G   G LAE+ V  E   
Sbjct: 67  GEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGL 126

Query: 115 VARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLA 174
           V  P  +S  E A +PCAGLTA  AL     +K    G    +L+    G V L+A+Q A
Sbjct: 127 VRAPDHLSFEEAATLPCAGLTAWNALFGLGPLK---PGD--TVLVQGTGG-VSLFALQFA 180

Query: 175 KLGNTHVTATCG-ARNIELVKSLGADEVLDYKT-PD--GAALKSPSGRKYDAVINCVTGI 230
           K     V AT      +E  K+LGAD V++Y+T PD     LK   GR  D V+  V G 
Sbjct: 181 KAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVE-VGGP 239

Query: 231 PWSTFEPNL------GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENL-- 282
              T   ++      G    +I F              L+  +  ++   +  KG  L  
Sbjct: 240 --GTLAQSIKAVAPGGVIS-LIGF--------------LSGFEAPVLLLPLLTKGATLRG 282

Query: 283 -------DF--LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
                   F  + + ++  +++ VID      +A++A+    SG   GK+++ 
Sbjct: 283 IAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score =  142 bits (359), Expect = 9e-40
 Identities = 98/335 (29%), Positives = 146/335 (43%), Gaps = 26/335 (7%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A++    GG    L  VEVP+P P   E L++V AA +N  D   + G   P  P   
Sbjct: 1   MKAIEITEPGGPEV-LVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPP--PPGA 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEG 126
             I   +VAGEV+ +G  V  +KVGD+V A+++GGG AE+        +  P+ +S  E 
Sbjct: 58  SDILGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEA 117

Query: 127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186
           A +P    T    L Q  G+K   +G+   +LI   +  +G  A+QLAK     V  T G
Sbjct: 118 AALPETFFTVWSNLFQRGGLK---AGE--TVLIHGGASGIGTTAIQLAKAFGARVFTTAG 172

Query: 187 -ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243
                   ++LGAD  ++Y+  D          G+  D +++ V G   S    N+    
Sbjct: 173 SDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGG---SYLNRNIKALA 229

Query: 244 K-----VIDFNPSPRVLLTFA---WKKLTFSKKQLVPFSVSPKGENLDFLVK----LVKE 291
                  I F    +  L       K+LT +   L    V+ K      L +    L+  
Sbjct: 230 LDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLAS 289

Query: 292 GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
           G+++ VID    L  A  A A   SG   GKI++ 
Sbjct: 290 GRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLT 324

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  138 bits (350), Expect = 2e-38
 Identities = 96/352 (27%), Positives = 143/352 (40%), Gaps = 49/352 (13%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A     +G     L+  EVPVP P   E L+KVEA  +   D  + KG    +   K 
Sbjct: 4   MKAAVLKKFGQP---LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGD---WPVPKL 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVV------------AVLSG-------------- 100
           P IP  ++ G V+ +G  V   KVGD+V                SG              
Sbjct: 58  PLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYT 117

Query: 101 --GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNIL 158
             GG AE+ V      V  P+ +  AE A + CAG+T ++AL ++  VK    G+   + 
Sbjct: 118 TDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKA-NVK---PGKW--VA 171

Query: 159 ITAASGAVGLYAVQLAKLGNTHVTA-TCGARNIELVKSLGADEVLDYKTPD-GAALKSPS 216
           +  A G +G  AVQ AK     V A T     +EL K LGAD V++    D   A+K   
Sbjct: 172 VVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVK--- 227

Query: 217 GRKYDAVINCVTGIPWSTFEPNLGTTGK-VIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV 275
               DA+I+ V           L   G  V+   P    +       L   +  +V   V
Sbjct: 228 -EIADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLV 286

Query: 276 SPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
             + +  + L     EGK+K  I     L +  +A+ +   G+  G+ +++ 
Sbjct: 287 GTRADLEEAL-DFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDM 337

Length = 339

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  138 bits (349), Expect = 3e-38
 Identities = 102/335 (30%), Positives = 157/335 (46%), Gaps = 32/335 (9%)

Query: 14  SYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASD 73
           +  GG   LK VE  +P P   E ++KVEA+ ++  D ++++G L P  P   PF P  D
Sbjct: 7   TRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRG-LYPDQP-PLPFTPGYD 64

Query: 74  VAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAG 133
           + G V  LGS V  F+VGD+V A+   GG AE+        V  P+ V AAE   +    
Sbjct: 65  LVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNY 124

Query: 134 LTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELV 193
           +TA+Q L ++  V    +GQ   +LI  ASG VG   ++LA L    V  T   RN   +
Sbjct: 125 VTAYQMLHRAAKVL---TGQ--RVLIHGASGGVGQALLELALLAGAEVYGTASERNHAAL 179

Query: 194 KSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDF---- 248
           + LGA   +DY+T D   A+ +P G   D V + V G  +      L   G ++ +    
Sbjct: 180 RELGA-TPIDYRTKDWLPAMLTPGGV--DVVFDGVGGESYEESYAALAPGGTLVCYGGNS 236

Query: 249 ---------NPSPRVLLTFAWKKLTFSKKQLVPFSVS------PKG--ENLDFLVKLVKE 291
                         +L   A  KL  + ++   + V       PK   ++L  L+ L+ +
Sbjct: 237 SLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAK 296

Query: 292 GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
           GK++  I  +  LS+  +A     SG+  GKI++ 
Sbjct: 297 GKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVLL 331

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score =  137 bits (347), Expect = 6e-38
 Identities = 102/355 (28%), Positives = 150/355 (42%), Gaps = 54/355 (15%)

Query: 7   MHAVQYDSYGG--GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPR 64
           M A+ +           L  +E+P P P   + L++VEA S+NP+D K++ G        
Sbjct: 1   MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGG---APVP 57

Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKVV---AVLSGGGLAEFAVAKESLTVARPQEV 121
             P I   D +G V  +GSEV  FKVGD+V     +   G  AE+ +  E +   +P+ +
Sbjct: 58  GQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSL 117

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTH 180
           S AE A +P   LTA +AL   LG+  D   + K +LI   +G VG  A+QLAK L    
Sbjct: 118 SFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLT 177

Query: 181 VTATCGARN--IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCV-TGIPWSTFEP 237
           V AT  +R   I  VK LGAD V+++       L++      D +     T   W     
Sbjct: 178 VIAT-ASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAE 236

Query: 238 NLGTTGKV--IDFNPSPRVLLTFAWKKLTFS---------------KKQLVPFSVSPKGE 280
            +   G +  I     P  L     K  +F                 +Q          E
Sbjct: 237 LIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQ---------HE 287

Query: 281 NLDFLVKLVKEGKLKTVIDSKHSLSKAED---------AWAKSISGRATGKIIVE 326
            L+ +  L+  GKLKT      +L++            A A   SG+  GKI++E
Sbjct: 288 ILNEVADLLDAGKLKT------TLTETLGPINAENLREAHALLESGKTIGKIVLE 336

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  135 bits (343), Expect = 2e-37
 Identities = 97/338 (28%), Positives = 149/338 (44%), Gaps = 27/338 (7%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV++  +GG    L+  E+PVP P   E L++VEA  +N  D   ++G      P   
Sbjct: 1   MRAVRFHQFGG-PEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIE--PPPL 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS-----GGGLAEFAVAKESLTVARPQEV 121
           P     + AG V  +G+ V  F VGD+V  + +      G  AE+A+   +  V  P  +
Sbjct: 58  PARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGL 117

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV 181
           S  E A +    LTA+ AL +  G++    G    +LITAAS +VGL A+Q+A      V
Sbjct: 118 SFVEAAALWMQYLTAYGALVELAGLR---PGDS--VLITAASSSVGLAAIQIANAAGATV 172

Query: 182 TATC-GARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPN 238
            AT   +   + + +LGA  V+     D     L+   G+  D V + V G  ++     
Sbjct: 173 IATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADA 232

Query: 239 LGTTGKVI-----DFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLD----FLVKLV 289
           L   G ++        P+P  L     K LTF  +      ++   E       F++  +
Sbjct: 233 LAPGGTLVVYGALSGEPTPFPLKAALKKSLTF--RGYSLDEITLDPEARRRAIAFILDGL 290

Query: 290 KEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
             G LK V+D         +A     SG+  GKI+V P
Sbjct: 291 ASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score =  130 bits (328), Expect = 6e-35
 Identities = 92/340 (27%), Positives = 155/340 (45%), Gaps = 44/340 (12%)

Query: 25  VEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS 83
           +++P+P     +E ++KV AA++NP+D KL       F  ++       D +G ++ +GS
Sbjct: 18  IKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGL--GRDYSGVIVKVGS 75

Query: 84  EVKN-FKVGDKV----VAVLSG-GGLAEFAV--AKESLT--VARPQEVSAAEGAGIPCAG 133
            V + +KVGD+V         G G L+++ +   K+       +P+ +S  E A  P   
Sbjct: 76  NVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVL 135

Query: 134 LTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTH-VTATCGARNIE 191
            TA+Q L   LG KL   G    +L+   S +VG +A+QLAK   N   V  TC +R+ E
Sbjct: 136 GTAYQILE-DLGQKL---GPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAE 191

Query: 192 LVKSLGADEVLDYKTPDGAALKSP------SGRKYDAVINCVTG---IPWST-----FEP 237
           L K LGAD  +DY    G  L  P         K+D +++CV G    P           
Sbjct: 192 LNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSK 251

Query: 238 N---LGTTG-KVIDFN--PSPRVLLTFAWKKLTFSKKQLVPFS-----VSPKGENLDFLV 286
           N   +   G    ++            A  +  F    L  ++     + P  + ++   
Sbjct: 252 NGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCA 311

Query: 287 KLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
           +L+ +GK+K  IDS +     ++A+ +  S RA GK++++
Sbjct: 312 ELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score =  129 bits (326), Expect = 7e-35
 Identities = 109/339 (32%), Positives = 160/339 (47%), Gaps = 34/339 (10%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV    +GG V  LK  E P P P +++ L+KV AA +N  D   ++G   P  P   
Sbjct: 2   MRAVTLKGFGG-VDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGS 58

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEG 126
             I   +VAG V  +GS+VK FK GD+V+A+L GGG AE+AVA +   +  PQ  +  E 
Sbjct: 59  SEILGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEA 118

Query: 127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATC 185
           A IP A LTA Q L +   VK    GQ  ++LI A +  VG  A QLA+      +  T 
Sbjct: 119 AAIPEAFLTAWQLLKKHGDVK---KGQ--SVLIHAGASGVGTAAAQLAEKYGAATIITTS 173

Query: 186 GARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRK-YDAVINCVTGIPWSTFEPNLGTT 242
               ++  K L A  ++ Y   +G A  +K  +G K  + V++CV G   S     L   
Sbjct: 174 SEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVD 233

Query: 243 GKVI-----------DFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENL--DF---LV 286
           GK I            FN  P   L      + FS   L   S   K  +L   F   ++
Sbjct: 234 GKWIVYGFMGGAKVEKFNLLP---LLRKRASIIFST--LRSRSDEYK-ADLVASFEREVL 287

Query: 287 KLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
             ++EG++K ++D  + L +  +A       +  GK+++
Sbjct: 288 PYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVL 326

Length = 334

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  128 bits (323), Expect = 2e-34
 Identities = 108/361 (29%), Positives = 148/361 (40%), Gaps = 72/361 (19%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPR-K 65
           M A            L+  EVP P P   E L+KV+AA +   D    KG    F PR K
Sbjct: 1   MKAAILH---KPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKG----FFPRGK 53

Query: 66  FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAV-----------LSG-------------- 100
           +P I   ++ G V  +G  V+ FK GD+V+             LSG              
Sbjct: 54  YPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEE 113

Query: 101 --GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNIL 158
             GG AE+    E   V  P  VS    A   C   TA  AL      K  G  +   +L
Sbjct: 114 VDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL------KRAGVKKGDTVL 167

Query: 159 ITAASGAVGLYAVQLAK-LGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSG 217
           +T A G VG++A+QLAK LG   +  T     ++++K LGAD V+D        +K   G
Sbjct: 168 VTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSKF-SEDVKKLGG 226

Query: 218 RKYDAVINCVTGIPWSTFEPNLG-------------TTGKVIDFNPSPRVLLTFAWKKLT 264
              D VI  V G P  T E +L               T       P   +L         
Sbjct: 227 --ADVVIELV-GSP--TIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLIL--------- 272

Query: 265 FSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKII 324
             K+  +  S+S    +++  +KLVKEGK+K VID   SL    +A     SG+  G+I+
Sbjct: 273 --KEIRIIGSISATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIV 330

Query: 325 V 325
           +
Sbjct: 331 L 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  127 bits (321), Expect = 2e-34
 Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 20/328 (6%)

Query: 10  VQYDSYGGGVAG-LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPF 68
           V Y  +G  +   L+ V +P+P P   E L+++ AA INP D     G      P   P 
Sbjct: 1   VVYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPP--LPA 58

Query: 69  IPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAG 128
           +P ++  G V+ +GS V    VG +V+ +   G   E+ VA     +  P  +S  + A 
Sbjct: 59  VPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAM 118

Query: 129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA-TCGA 187
           +    LTA   LT+ L +          ++  AA+ AVG   +QLAKL            
Sbjct: 119 LYINPLTAWLMLTEYLKLP-----PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRD 173

Query: 188 RNIELVKSLGADEVLDYKTPD-GAALKS-PSGRKYDAVINCVTGIPWSTFEPNLGTTGKV 245
             +E +K+LGADEV+D    D    +K    G      ++ V G   +    +L   G +
Sbjct: 174 EQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTL 233

Query: 246 IDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP---------KGENLDFLVKLVKEGKLKT 296
           +++       + F      F    +  F +           K E    ++KLV+ G L T
Sbjct: 234 VNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTT 293

Query: 297 VIDSKHSLSKAEDAWAKSISGRATGKII 324
            + +K  L   E+A A +      GK++
Sbjct: 294 PVGAKFPLEDFEEAVAAAEQPGRGGKVL 321

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  124 bits (314), Expect = 3e-33
 Identities = 99/348 (28%), Positives = 145/348 (41%), Gaps = 53/348 (15%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A+ ++  G  +  LK  +V  P P   E L++V+ A +NP+D+ +         P   
Sbjct: 1   MKALVFEKSG--IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA--VKVKP--M 54

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVV---------------------------AVLS 99
           P IP ++ AG V  +G  VK  K GD+VV                            V+S
Sbjct: 55  PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVS 114

Query: 100 GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI 159
            GG AE+ V  E      P  +S    A +P A LTA+ AL      K  G G  + +++
Sbjct: 115 NGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL------KTAGLGPGETVVV 168

Query: 160 TAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKS-PSGR 218
             ASG  G++AVQLAK+    V A       + +K  GADEV+DY   D    K     +
Sbjct: 169 FGASGNTGIFAVQLAKMMGAEVIAVSRK---DWLKEFGADEVVDY---DEVEEKVKEITK 222

Query: 219 KYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV--S 276
             D VIN +    W      LG  G+++ F       LT    KL  S       S+  S
Sbjct: 223 MADVVINSLGSSFWDLSLSVLGRGGRLVTFG-----TLTGGEVKLDLSDLYSKQISIIGS 277

Query: 277 PKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKII 324
             G   + L  +     LK  +     L +A++A  +  S    G+I+
Sbjct: 278 TGGTRKELLELVKIAKDLKVKVWKTFKLEEAKEALKELFSKERDGRIL 325

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  125 bits (315), Expect = 4e-33
 Identities = 95/358 (26%), Positives = 150/358 (41%), Gaps = 45/358 (12%)

Query: 7   MHAVQYDSYGGGVAGLKHVE-VPVPTPNKDEALLKVEAASINPIDWKLQKG--------- 56
           M AV    +GG +  L + + VPVPTP   E L++V A  +N  D   ++G         
Sbjct: 1   MRAVLLTGHGG-LDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGA 59

Query: 57  --------MLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVV------------- 95
                            FP I  +D+ G V+ +G  V   ++G++V+             
Sbjct: 60  TDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDP 119

Query: 96  ----AVLSG--GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLD 149
                + S   GG AE+ V            +S  E A  PC+  TA   L +  GV   
Sbjct: 120 ADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLER-AGV--- 175

Query: 150 GSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDG 209
           G+G+   +L+T ASG VG   VQLAK     V A  GA   E V++LGAD V+    P  
Sbjct: 176 GAGET--VLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLL 233

Query: 210 AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQ 269
           A  K+  G   D V + V G  +      L   G+ +        ++    + L      
Sbjct: 234 ADAKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLT 293

Query: 270 LVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           L   ++  +      LV+ ++EG+++ V+     LS+  +A A+ +  R  GK+++ P
Sbjct: 294 LFGSTLGTREV-FRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  123 bits (310), Expect = 1e-32
 Identities = 108/323 (33%), Positives = 146/323 (45%), Gaps = 35/323 (10%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84
           V+VPVP P   E L+K     IN  D     G   P +  K PF    +  GEV+ +G  
Sbjct: 21  VDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGV--KPPFDCGFEGVGEVVAVGEG 78

Query: 85  VKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSL 144
           V +FKVGD V A +S G  AE+ V      V  P E+   E   +  +GLTA  AL +  
Sbjct: 79  VTDFKVGDAV-ATMSFGAFAEYQVVPARHAVPVP-ELKP-EVLPLLVSGLTASIALEEVG 135

Query: 145 GVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLD 203
            +K   SG  + +L+TAA+G  G +AVQLAKL   HV  TC +    E +KSLG D  ++
Sbjct: 136 EMK---SG--ETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPIN 190

Query: 204 YKTPD-GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDF-------------- 248
           YKT D G  LK    +  D V   V G  + T   NL   G++I                
Sbjct: 191 YKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSP 250

Query: 249 ---NPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSK--HS 303
                 P  LL    K  +      +P       ++LD L++L + GKL   +D      
Sbjct: 251 VKGATLPPKLL---AKSASVRGF-FLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRG 306

Query: 304 LSKAEDAWAKSISGRATGKIIVE 326
           L    DA     SG+  GK++VE
Sbjct: 307 LESVADAVDYLYSGKNIGKVVVE 329

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  115 bits (291), Expect = 3e-30
 Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 32/308 (10%)

Query: 35  DEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKV 94
           DE  ++V+AA +N  D  +  G+L              + +G V  +GS V   KVGD+V
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALGLLPGDETP-----LGLECSGIVTRVGSGVTGLKVGDRV 55

Query: 95  VAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQ 154
           +  L+ G  A        L V  P  +S  E A +P A LTA+ AL     ++    G+ 
Sbjct: 56  MG-LAPGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQ---KGE- 110

Query: 155 KNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLG--ADEVLDYKTPDGAA 211
            ++LI AA+G VG  A+QLA+     V AT G     E ++ LG   D +   +    A 
Sbjct: 111 -SVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFSSRDLSFAD 169

Query: 212 --LKSPSGRKYDAVINCVTGIP----WSTFEPNLGTTGKVI-----DFNPSPRVLLTFAW 260
             L++  GR  D V+N ++G      W    P     G+ +     D   + ++ +    
Sbjct: 170 GILRATGGRGVDVVLNSLSGELLRASWRCLAPF----GRFVEIGKRDILSNSKLGMRPFL 225

Query: 261 KKLTFSKKQLVPFSVSPK---GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISG 317
           + ++FS   L   +        E L  +++L++ G LK +  +    +   DA+    SG
Sbjct: 226 RNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSG 285

Query: 318 RATGKIIV 325
           +  GK+++
Sbjct: 286 KHIGKVVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score =  114 bits (287), Expect = 2e-29
 Identities = 91/324 (28%), Positives = 148/324 (45%), Gaps = 21/324 (6%)

Query: 20  AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVI 79
             L  +++P P P   + L++V+A S+NP+D K++  M         P I   D AG V+
Sbjct: 15  DALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARM---APEAGQPKILGWDAAGVVV 71

Query: 80  GLGSEVKNFKVGDKVV---AVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTA 136
            +G EV  FK GD+V     +   G  AEF +  E +   +P+ +S AE A +P   +TA
Sbjct: 72  AVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITA 131

Query: 137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHVTATCG-ARNIELVK 194
            + L   LG+    +G ++ +LI   +G VG   +QLA+ L    V AT     + E V 
Sbjct: 132 WELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL 191

Query: 195 SLGADEVLDYKTPDGAALKSPSGRKYDAVINCV-TGIPWSTFEPNLGTTGK--------V 245
            LGA  V+D+  P  A L+         V +   T   +      L   G+         
Sbjct: 192 ELGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPAE 251

Query: 246 IDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLS 305
           +D +P  R  ++  W +  F++       +  +   L+ + +LV  GK++T +       
Sbjct: 252 LDISPFKRKSISLHW-EFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTI 310

Query: 306 KAED---AWAKSISGRATGKIIVE 326
            A +   A A   SG+A GKI++E
Sbjct: 311 NAANLKRAHALIESGKARGKIVLE 334

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  113 bits (286), Expect = 3e-29
 Identities = 96/359 (26%), Positives = 147/359 (40%), Gaps = 59/359 (16%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A ++    G    L   EVPVP P   E L+KV+AA +   D  +  G +      K 
Sbjct: 1   MKAWRFH--KGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPT--LTKL 56

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAV-----------LSG--------------- 100
           P     ++AG V+ +G+ V NFKVGD+V                G               
Sbjct: 57  PLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGI 116

Query: 101 -GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI 159
            GG AE+ V      V  P  V  A+ A    A LT + A+ ++  VK  G      +L+
Sbjct: 117 DGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVK-PGE----TVLV 171

Query: 160 TAASGAVGLYAVQLAKLGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGAALKSPS-G 217
               G +GL AVQ+AK     V A       +EL K LGADEVL+         K+   G
Sbjct: 172 IGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLG 230

Query: 218 RKYDAVINCVTGIPWSTFEPNLGT---TGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFS 274
             +D + + V G    TFE         G++        V++     KLT     L+   
Sbjct: 231 GGFDVIFDFV-GTQ-PTFEDAQKAVKPGGRI--------VVVGLGRDKLTVDLSDLIARE 280

Query: 275 VSPKG------ENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           +   G      E+L  ++ L+ +GKL   +++   L +  +   +   G+  G++++ P
Sbjct: 281 LRIIGSFGGTPEDLPEVLDLIAKGKLDPQVET-RPLDEIPEVLERLHKGKVKGRVVLVP 338

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score =  110 bits (279), Expect = 2e-28
 Identities = 77/302 (25%), Positives = 130/302 (43%), Gaps = 32/302 (10%)

Query: 40  KVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS 99
           +V AA +N  D  +  G+     P +       + AG V  +G  V    VGD+V+ +  
Sbjct: 2   EVRAAGLNFRDVLIALGLY----PGEAVL--GGECAGVVTRVGPGVTGLAVGDRVMGLAP 55

Query: 100 GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI 159
           G   A   V    L V  P   S  E A +P   LTA+ AL     ++    G+  ++LI
Sbjct: 56  GA-FATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLR---PGE--SVLI 109

Query: 160 TAASGAVGLYAVQLAKLGNTHVTATCGARN-IELVKSLG--ADEVLDYKTPDGAA--LKS 214
            AA+G VG  A+QLA+     V AT G+    + +++LG   D +   +    A   L++
Sbjct: 110 HAAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFLRALGIPDDHIFSSRDLSFADEILRA 169

Query: 215 PSGRKYDAVINCVTG--IP--WSTFEPN-----LGTTGKVIDFNPSPRVLLTFAWKKLTF 265
             GR  D V+N ++G  +        P      +G      D   + ++ +      +++
Sbjct: 170 TGGRGVDVVLNSLSGEFLDASLRCLAPGGRFVEIGKR----DIRDNSQLAMAPFRPNVSY 225

Query: 266 SKKQLVPFSVSPK--GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKI 323
               L      P    E L  +++L  EG L+ +  +   +S AEDA+     G+  GK+
Sbjct: 226 HAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDAEDAFRYMQQGKHIGKV 285

Query: 324 IV 325
           ++
Sbjct: 286 VL 287

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score =  109 bits (273), Expect = 1e-27
 Identities = 84/310 (27%), Positives = 131/310 (42%), Gaps = 21/310 (6%)

Query: 29  VPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNF 88
           V  P   E  ++V A S+N  D    +G L P +P  +PF P  + +G V  +G  V   
Sbjct: 2   VAPPGPGEVRIQVRAFSLNFGDLLCVRG-LYPTMP-PYPFTPGFEASGVVRAVGPHVTRL 59

Query: 89  KVGDKVVAVLSG--GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGV 146
            VGD+V+A      GG A      E   V +P  +S  E   +P   LT   A  ++   
Sbjct: 60  AVGDEVIAGTGESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARA--- 116

Query: 147 KLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYK 205
              G  + ++ILI  A+G  GL AVQLA+L    + AT      +E +K LG   V++Y 
Sbjct: 117 ---GLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVINYV 173

Query: 206 TPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDF-----NPSPRVLLTF 258
             D     ++   GR  D VIN ++G         L   G+ ++        +P V L+ 
Sbjct: 174 EEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV 233

Query: 259 AWKKLTFSKKQLVPFSVSPKGENLDF---LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSI 315
                +F    L    +       D+   +V LV+EG+L+  +          +A+    
Sbjct: 234 LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLS 293

Query: 316 SGRATGKIIV 325
                GK++V
Sbjct: 294 DRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  108 bits (272), Expect = 4e-27
 Identities = 72/259 (27%), Positives = 104/259 (40%), Gaps = 54/259 (20%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A +   YG     L+  +VPVP P   + L++V  A +   D  +  G+    LP K 
Sbjct: 1   MKAARLYEYGKP---LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKL 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVV-----------AVLSG--------------- 100
           PF    + AG V  +GS V   K GD VV               G               
Sbjct: 58  PFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGT 117

Query: 101 -GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI 159
            GG AE+ +      V  P+ +   E A +  AGLTA+ A+ ++L     GS     +++
Sbjct: 118 DGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGS----TVVV 173

Query: 160 TAASGAVGLYAVQLAKLGNTHVTATCGARNI---------ELVKSLGADEVLDYKTPDGA 210
               G +G  AVQ+ +       A   A  I         +L + LGAD VL+  + D  
Sbjct: 174 IGV-GGLGHIAVQILR-------ALTPATVIAVDRSEEALKLAERLGADHVLN-ASDDVV 224

Query: 211 A--LKSPSGRKYDAVINCV 227
               +   GR  DAVI+ V
Sbjct: 225 EEVRELTGGRGADAVIDFV 243

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  108 bits (272), Expect = 4e-27
 Identities = 93/374 (24%), Positives = 145/374 (38%), Gaps = 77/374 (20%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGML------RP 60
           M A      G     L+ VE+  P P   E L+KV A  +   D  +  G          
Sbjct: 1   MKAAAVVEPG---KPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTM 57

Query: 61  FLPR---KFPFIPASDVAGEVIGLGSEVKNFKVGDKVVA--------------------- 96
            L     K P +   ++ GEV+ +G +  + KVGDKV+                      
Sbjct: 58  SLDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCA 117

Query: 97  ------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDG 150
                 +   GG AE+ +   S  +  P  +  A  A + C+GLTA+ A+      KL  
Sbjct: 118 KGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVK-----KLMP 172

Query: 151 SGQQKNILITAASGAVGLYAVQLAK-LGNTH-VTATCGARNIELVKSLGADEVLDYKTPD 208
               + ++I  A G +GL A+ L K LG  + +        +E  K+ GAD V++   PD
Sbjct: 173 LVADEPVVIIGA-GGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPD 231

Query: 209 GAA-LKSPSGRKYDAVINCVTGIPWSTF-EPNLGTTGKVI-------DFNPSPRVLLTFA 259
            A  +   +G   DAVI+ V     ++     L   GK++       +       L    
Sbjct: 232 AAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLP---LPLLP 288

Query: 260 WKKLTFSKKQLVPFSVSPKG------ENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAK 313
            + LT             +G      E L  LV L K GKLK +  ++  LS   DA   
Sbjct: 289 LRALTI------------QGSYVGSLEELRELVALAKAGKLKPIPLTERPLSDVNDALDD 336

Query: 314 SISGRATGKIIVEP 327
             +G+  G+ +++P
Sbjct: 337 LKAGKVVGRAVLKP 350

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score =  106 bits (266), Expect = 3e-26
 Identities = 95/347 (27%), Positives = 145/347 (41%), Gaps = 40/347 (11%)

Query: 9   AVQYDSYGGGVAGLKHVEVPVPTPN-KDEALLKVEAASINPIDWKLQKG--MLRPFLPRK 65
           A+ Y  +G     L+     +P P   +E L+K+ AA INP D    +G   ++P    +
Sbjct: 3   ALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPE 62

Query: 66  FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGL-AEFAVAKESLTVARPQEVSAA 124
            P +  ++  GEV+ +GS VK+ K GD V+ +  G G     AV      +  P +V   
Sbjct: 63  PPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPE 122

Query: 125 EGAGI---PCAGLTAHQALTQSLGVKLDGSGQQKN--ILITAASGAVGLYAVQLAKLGNT 179
           + A +   PC   TA++ L     VKL     Q    ++   A+ AVG   +QLAKL   
Sbjct: 123 QAATLSVNPC---TAYRLLEDF--VKL-----QPGDWVIQNGANSAVGQAVIQLAKLLGI 172

Query: 180 HVTATC--GARNIELV---KSLGADEVLDY----KTPDGAALKSPSGRKYDAVINCVTGI 230
                        EL    K+LGAD VL             LKS  G +    +NCV G 
Sbjct: 173 KTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGK 232

Query: 231 PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP--KGEN------- 281
             +     L   G ++ +       +T     L F    L  F ++   K  N       
Sbjct: 233 SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDM 292

Query: 282 LDFLVKLVKEGKLKTV---IDSKHSLSKAEDAWAKSISGRATGKIIV 325
           L+ L +L++EGKLK       +   L + +DA A ++ G   GK ++
Sbjct: 293 LEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  105 bits (264), Expect = 6e-26
 Identities = 72/251 (28%), Positives = 104/251 (41%), Gaps = 41/251 (16%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A   + +G      +  +VPVP P   E L+K+EA+ +   D     G        K 
Sbjct: 1   MKAAVVEEFGE--KPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPV--KPKL 56

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVV------------------------AVLSG-- 100
           P I   + AG V+ +G  V   KVGD+V                            SG  
Sbjct: 57  PLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYT 116

Query: 101 --GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNIL 158
             G  AE+A+A        P  +S  + A + CAG+T ++AL ++ G+K    G    ++
Sbjct: 117 VDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKA-GLK---PGD--WVV 170

Query: 159 ITAASGAVGLYAVQLAKLGNTHVTAT-CGARNIELVKSLGADEVLDYKTPD--GAALKSP 215
           I+ A G +G   VQ AK     V A   G   +EL K LGAD  +D+K  D   A  +  
Sbjct: 171 ISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELT 230

Query: 216 SGRKYDAVINC 226
            G    AV+  
Sbjct: 231 GGGGAHAVVVT 241

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 2e-25
 Identities = 105/345 (30%), Positives = 154/345 (44%), Gaps = 61/345 (17%)

Query: 21  GLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPR-KFPFIPASDVAGEVI 79
           G +  EVP P P KDE ++KV  A +   D  LQ   L+ F PR K+P I   +V G V 
Sbjct: 12  GYRIEEVPDPKPGKDEVVIKVNYAGLCYRDL-LQ---LQGFYPRMKYPVILGHEVVGTVE 67

Query: 80  GLGSEVKNFKVGDKVVAVL-----------SG----------------GGLAEFAVAKES 112
            +G  VK FK GD+V ++L           SG                G  AE+A  K +
Sbjct: 68  EVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVT 127

Query: 113 LTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ 172
             V  P  VS      +PC     ++ L      +  G  + + +L+T A G VG++A+Q
Sbjct: 128 SLVKVPPNVSDEGAVIVPCVTGMVYRGL------RRAGVKKGETVLVTGAGGGVGIHAIQ 181

Query: 173 LAK-LGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKY---DAVINCVT 228
           +AK LG   +  T      ++V    AD V+      G+   S   +K    D VI  V 
Sbjct: 182 VAKALGAKVIAVTSSESKAKIVSKY-ADYVI-----VGSKF-SEEVKKIGGADIVIETV- 233

Query: 229 GIPWSTFEP---NLGTTGKVI---DFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENL 282
           G P  T E    +L   GK+I   + +PSP   L          K   +   +S    ++
Sbjct: 234 GTP--TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLG---YIILKDIEIIGHISATKRDV 288

Query: 283 DFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           +  +KLV EGK+K VI ++ SLS+ + A  +       GKI+V+P
Sbjct: 289 EEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333

Length = 334

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  103 bits (258), Expect = 2e-25
 Identities = 96/327 (29%), Positives = 140/327 (42%), Gaps = 30/327 (9%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A+  D        L  V  P P P+  EAL++V A S+N        G L+    R  
Sbjct: 1   MRALVVDPDAPLRLRLGEVPDPQPAPH--EALVRVAAISLNR-------GELKFAAERPD 51

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEF-AVAKESLTVARPQEVSAAE 125
             +P  D AG V    ++     VG +VV + + G  AE  AV    L V  P  VS A+
Sbjct: 52  GAVPGWDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVL-PDGVSFAQ 110

Query: 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC 185
            A +P AG+TA +AL +       G    + +L+T ASG VG +AVQLA L   HV A  
Sbjct: 111 AATLPVAGVTALRALRRG------GPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVV 164

Query: 186 GA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK 244
           G+    E ++ LGA EV+             SG   D V++ V G   +     L   G 
Sbjct: 165 GSPARAEGLRELGAAEVV--VGGSEL-----SGAPVDLVVDSVGGPQLARALELLAPGGT 217

Query: 245 VIDFNPSPRVLLTFAWKKLTFS--KKQLVPF---SVSPKGENLDFLVKLVKEGKLKTVID 299
           V+    S      F           ++L  F      P   +L  L+ LV  G+L   I 
Sbjct: 218 VVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIG 277

Query: 300 SKHSLSKAEDAWAKSISGRATGKIIVE 326
            + S ++ ++A    ++ R  GK +++
Sbjct: 278 WRGSWTEIDEAAEALLARRFRGKAVLD 304

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score =  101 bits (255), Expect = 7e-25
 Identities = 92/353 (26%), Positives = 135/353 (38%), Gaps = 68/353 (19%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A+  +  GG    LK  E+P+P P     L++V+A  +N  +   ++G        KF
Sbjct: 1   MKAIVIEQPGGPEV-LKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGH---SPSVKF 56

Query: 67  PFIPASDVAGEVI-GLGSEVKNFKVGDKVVAVLSG------GGLAEFAVAKESLTVARPQ 119
           P +   +  GEV    G     F  G +V   + G      G  AE+ +       A   
Sbjct: 57  PRVLGIEAVGEVEEAPGGT---FTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDS 113

Query: 120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT 179
           ++S AE A +P    TA  +L +SLG++         +LI   + +VGL A++LAK    
Sbjct: 114 DLSWAELAALPETYYTAWGSLFRSLGLQ-----PGDTLLIRGGTSSVGLAALKLAKALGA 168

Query: 180 HVTATC-GARNIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAV-------------- 223
            VTAT        L+K LGADEV+ D          +P G  +D V              
Sbjct: 169 TVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGG--FDKVLELVGTATLKDSLR 226

Query: 224 ------INCVTGI---PWS--TFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVP 272
                 I C+TG+    W+   F P        +D  PS   L          S   +  
Sbjct: 227 HLRPGGIVCMTGLLGGQWTLEDFNP--------MDDIPSGVNLTLT-----GSSSGDVPQ 273

Query: 273 FSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
                    L  L   V  G L        +  +  +A A   S RA GK++V
Sbjct: 274 TP-------LQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score =  102 bits (255), Expect = 7e-25
 Identities = 66/205 (32%), Positives = 95/205 (46%), Gaps = 10/205 (4%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A++   +G     L   +VP P P   +  + V AA ++ +D +L+ G      P + 
Sbjct: 1   MRAIRLHEFGPP-EVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPEL 59

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL--SGGGLAEFAVAKESLTVARPQEVSAA 124
           P++P  +VAG V  +G  V    +G +VVA    +GGG AE AVA        P  +   
Sbjct: 60  PYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLE 119

Query: 125 EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHVTA 183
               +   G TA   L     +          +L+TAA+G +G   VQLAK  G T V A
Sbjct: 120 AAVAVVHDGRTA-LGLLDLATLTPG-----DVVLVTAAAGGLGSLLVQLAKAAGATVVGA 173

Query: 184 TCGARNIELVKSLGADEVLDYKTPD 208
             G     LV++LGAD  +DY  PD
Sbjct: 174 AGGPAKTALVRALGADVAVDYTRPD 198

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score =  101 bits (253), Expect = 1e-24
 Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 27/227 (11%)

Query: 17  GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAG 76
            G   L    +P+    + + L++V  +S+N  D     G     + R +P  P  D AG
Sbjct: 10  DGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATG--NGGVTRNYPHTPGIDAAG 67

Query: 77  EVIGLGSEVKNFKVGDKVVA------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIP 130
            V+   S+   F+ GD+V+       + + GG AE+        V  P+ +S  E   + 
Sbjct: 68  TVVS--SDDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILG 125

Query: 131 CAGLTAHQALTQSLGVKLDGSGQQKN---ILITAASGAVGLYAVQ-LAKLGNTHVTATCG 186
            AG TA  ++      +L+ +GQ      +L+T A+G VG  AV  LAKLG T V A  G
Sbjct: 126 TAGFTAALSVH-----RLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT-VVALTG 179

Query: 187 ARN-IELVKSLGADEVL---DYKTPDGAALKSPSGRKYDAVINCVTG 229
                + +KSLGA EVL   D        L      ++   I+ V G
Sbjct: 180 KEEQADYLKSLGASEVLDREDLLDESKKPLLK---ARWAGAIDTVGG 223

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  101 bits (253), Expect = 2e-24
 Identities = 89/329 (27%), Positives = 131/329 (39%), Gaps = 50/329 (15%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG--LG 82
            EV VP P + + LL+    S++P   + +      + P   P      + G  +   + 
Sbjct: 30  EEVDVPEPGEGQVLLRTLYLSLDP-YMRGRMSDAPSYAP---PVELGEVMVGGTVAKVVA 85

Query: 83  SEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTV---ARPQEVSAAEGA-GIPCAGLTAHQ 138
           S    F+ GD VV V    G  E+A++           P  +SA  G  G+P  GLTA+ 
Sbjct: 86  SNHPGFQPGDIVVGVS---GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMP--GLTAYF 140

Query: 139 ALTQSLGVKLDGSGQQKN---ILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK 194
            L           GQ K    ++++AA+GAVG    Q+AKL    V    G A   + + 
Sbjct: 141 GLLDI--------GQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLT 192

Query: 195 S-LGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI------ 246
             LG D  +DYK  D   ALK    +  D     V G       P L    ++       
Sbjct: 193 EELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAIS 252

Query: 247 DFN-----PSPRVLLTFAWKKLTFSKKQLVPFSVSPK-----GENLDFLVKLVKEGKLKT 296
            +N     P PR L     K+L      +  F V+        E L  L   VKEGK++ 
Sbjct: 253 QYNAPELPPGPRRLPLLMAKRLR-----VQGFIVASDYDQRFPEALRELGGWVKEGKIQY 307

Query: 297 VIDSKHSLSKAEDAWAKSISGRATGKIIV 325
                  L  A +A+   +SG+  GK++V
Sbjct: 308 RETIVDGLENAPEAFIGLLSGKNFGKLVV 336

Length = 340

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 98.3 bits (246), Expect = 1e-23
 Identities = 93/330 (28%), Positives = 134/330 (40%), Gaps = 52/330 (15%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG--LG 82
           VEVP+P     E L++    S++P      +G +        P      + G  +G  + 
Sbjct: 23  VEVPLPELKDGEVLVRTLYLSVDPY----MRGWMSDAKSYSPPVQLGEPMRGGGVGEVVE 78

Query: 83  SEVKNFKVGDKVVAVLSGGGLAEFAVAKES-----LTVARPQEVSAAEGA-GIPCAGLTA 136
           S   +FKVGD V   L   G  E+AV   +     L  +    +SA  G  G+   GLTA
Sbjct: 79  SRSPDFKVGDLVSGFL---GWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMT--GLTA 133

Query: 137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKS 195
           +  LT+    K    G+   ++++AA+GAVG    Q+AKL    V    G       +  
Sbjct: 134 YFGLTEIGKPK---PGE--TVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVE 188

Query: 196 -LGADEVLDYKTPD-GAALK--SPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI----- 246
            LG D  ++YKTPD   ALK  +P G   D   + V G         L   G++      
Sbjct: 189 ELGFDAAINYKTPDLAEALKEAAPDG--IDVYFDNVGGEILDAALTLLNKGGRIALCGAI 246

Query: 247 -----DFNPSPRVLLTFAWKKLT------FSKKQLVPFSVSPKGENLDFLVKLVKEGKLK 295
                   P P+ L     K+LT             P       E L  L K + EGKLK
Sbjct: 247 SQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFP-------EALAELAKWLAEGKLK 299

Query: 296 TVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
              D    L  A +A+    +G+ TGK++V
Sbjct: 300 YREDVVEGLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 94.9 bits (237), Expect = 3e-22
 Identities = 84/262 (32%), Positives = 109/262 (41%), Gaps = 53/262 (20%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A+ Y+    G   L+  EVPVP P  DE L+KV A  I   D  + +G    F     
Sbjct: 1   MKALVYE----GPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEG---EFGA-AP 52

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVA---------------------------VLS 99
           P +P  + AG V+ +GS+V  FKVGD+V                             V  
Sbjct: 53  PLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTR 112

Query: 100 GGGLAEFAVAKESLTVARPQEVSAAEGAGI-P--CAGLTAHQALTQSLGVKLDGSGQQKN 156
            GG AE+ V         P  +S  E A   P  CA    H       G+ L G     +
Sbjct: 113 NGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCA---VH-------GLDLLGIKPGDS 162

Query: 157 ILITAASGAVGLYAVQLAKL-GNTHVT-ATCGARNIELVKSLGADEVLDYKTPDGAALKS 214
           +L+  A G +GL   QL KL G + VT A      +EL K LGA E +D    D  A K 
Sbjct: 163 VLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKE 221

Query: 215 PSGRKYDAVINCVTGIPWSTFE 236
            +   +D VI   TG+P  T E
Sbjct: 222 DNPYGFDVVIEA-TGVP-KTLE 241

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 91.1 bits (227), Expect = 5e-21
 Identities = 71/230 (30%), Positives = 97/230 (42%), Gaps = 44/230 (19%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81
           L+  EVPVP P   E L+KVEA  +   D  + +G L    P K P IP  ++ G V  +
Sbjct: 17  LRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDL---PPPKLPLIPGHEIVGRVEAV 73

Query: 82  GSEVKNFKVGDKV-VAVL-----------SG----------------GGLAEFAVAKESL 113
           G  V  F VGD+V V  L           SG                GG AE+ VA E  
Sbjct: 74  GPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERF 133

Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
               P++    E A + CAG+  ++AL      KL G    + + +    GA    A+Q+
Sbjct: 134 AYPIPEDYDDEEAAPLLCAGIIGYRAL------KLAGLKPGQRLGLYGF-GASAHLALQI 186

Query: 174 AKLGNTHVTA-TCGARNIELVKSLGADEVLDYKTP-----DGAALKSPSG 217
           A+     V A T    + EL + LGAD   D         D A + +P G
Sbjct: 187 ARYQGAEVFAFTRSGEHQELARELGADWAGDSDDLPPEPLDAAIIFAPVG 236

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 90.5 bits (225), Expect = 1e-20
 Identities = 69/238 (28%), Positives = 102/238 (42%), Gaps = 46/238 (19%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81
           L+  EVPVP P   E L+K+EA  +   D    +G    +   K+P +P  ++ GEV+ +
Sbjct: 12  LEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGD---WGGSKYPLVPGHEIVGEVVEV 68

Query: 82  GSEVKNFKVGDKV------------------------VAVLSG----GGLAEFAVAKESL 113
           G+ V+  KVGD+V                         AV +G    GG AE+ VA    
Sbjct: 69  GAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEY 128

Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
           TV  P  +  A+ A + CAG+T + AL  +      G    + + +    G +G  AVQ 
Sbjct: 129 TVLLPDGLPLAQAAPLLCAGITVYSALRDA------GPRPGERVAVLGI-GGLGHLAVQY 181

Query: 174 AKLGNTHVTA-TCGARNIELVKSLGADEVLDYKT--PDGAALKSPSGRKYDAVINCVT 228
           A+       A T      EL + LGADEV+D      + AA         D ++  V 
Sbjct: 182 ARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGG-----ADVILVTVV 234

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 89.2 bits (222), Expect = 4e-20
 Identities = 85/366 (23%), Positives = 135/366 (36%), Gaps = 70/366 (19%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDW-KLQKGMLRPFLPRK 65
           M A+     G     L++ ++P P P   E L+KV+A  I   D  +             
Sbjct: 1   MKALVLTGPGD----LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-----AYH 51

Query: 66  FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAV-----------LSG-------------- 100
            P +   + +G V  +GS V +  VGD+V                G              
Sbjct: 52  PPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSR 111

Query: 101 --GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNIL 158
             G  AE+        +  P  V   E A I  A +  H        V+L G      ++
Sbjct: 112 RDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALH-------AVRLAGITLGDTVV 164

Query: 159 ITAASGAVGLYAVQLAK-LGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGAALKSP- 215
           +  A G +GL A+Q  K LG   V A       + + + LGAD+ ++ K  D   ++   
Sbjct: 165 VIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELT 223

Query: 216 SGRKYDAVINCVTGIPWSTFEPNLGTT---GKVIDF-NPSPRVLLTFAWKKLTFSK---K 268
            GR  D VI    G P +T E  L      GKV+    P   V L+    +  F K   K
Sbjct: 224 EGRGADLVIEAA-GSP-ATIEQALALARPGGKVVLVGIPYGDVTLS----EEAFEKILRK 277

Query: 269 QLV------PFSVSPKGENLDFLVKLVKEGKL--KTVIDSKHSLSKAEDAWAKSISGR-A 319
           +L        +S    G+     + L+  GK+  + +I  +  L     A+ +       
Sbjct: 278 ELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEF 337

Query: 320 TGKIIV 325
           +GK+++
Sbjct: 338 SGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 88.5 bits (220), Expect = 6e-20
 Identities = 87/351 (24%), Positives = 140/351 (39%), Gaps = 74/351 (21%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKL-QKGMLRPFLPRKFPFIPASDVAGEVIGLGS 83
            E PVP P   E LL+V+A+ +   D      G   P        IP  + AG V+ +G 
Sbjct: 15  REFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQ---GVIPGHEPAGVVVAVGP 71

Query: 84  EVKNFKVGDKVVAVLSG----------------------------GGLAEFAVAKESLTV 115
            V +F+VGD+V+                                 GG AE+ +  E   +
Sbjct: 72  GVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLI 131

Query: 116 ARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK 175
             P ++S A+GA + C   TA+ AL + +GV    +     +L+  A G VGL A+ LA+
Sbjct: 132 PLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDT-----VLVVGA-GPVGLGALMLAR 184

Query: 176 -LGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGAA-LKSPSGRKYDAVINCVTGI-- 230
            LG   V         +EL K+LGAD V++    D     +  SG   D  I C      
Sbjct: 185 ALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGNTAA 244

Query: 231 ---------PWST--FEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVP---FSVS 276
                    PW        +G  G++     S  ++           ++ L+    FSV 
Sbjct: 245 RRLALEAVRPWGRLVL---VGEGGEL-TIEVSNDLIRK---------QRTLIGSWYFSVP 291

Query: 277 PKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
              E  +FL +   + ++  ++  +  L +A +A+A    G  +GK++   
Sbjct: 292 DMEECAEFLAR--HKLEVDRLVTHRFGLDQAPEAYALFAQG-ESGKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 83.2 bits (206), Expect = 1e-19
 Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 9/134 (6%)

Query: 196 LGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT---TGKVIDFNPSP 252
           LGADEV+DY T D     +  G   D V++ V G    T    L      G+++      
Sbjct: 1   LGADEVIDYTTEDFEEATAGEG--VDVVLDTVGG---ETLLRALLALKPGGRLVSIGGPD 55

Query: 253 RVL-LTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAW 311
            +L +             L P S    G +L  L +LV+ GKL+ VID    L +A +A 
Sbjct: 56  LLLSVAAKAGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKLRPVIDRVFPLEEAAEAH 115

Query: 312 AKSISGRATGKIIV 325
               SGRA GK+++
Sbjct: 116 RYLESGRARGKVVL 129

Length = 129

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 86.5 bits (215), Expect = 3e-19
 Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 22/178 (12%)

Query: 64  RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVA------VLSGGGLAEFAVAKESLTVAR 117
           R +P IP  D AG V+   SE   F+ GD+V+       V   GG +++A       V  
Sbjct: 54  RSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPL 111

Query: 118 PQEVSAAEGAGIPCAGLTAH---QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ-L 173
           P+ +S  E   +  AG TA     AL ++ G+  +       +L+T A+G VG  AV  L
Sbjct: 112 PEGLSLREAMALGTAGFTAALSVMALERN-GLTPE----DGPVLVTGATGGVGSLAVAIL 166

Query: 174 AKLGNTHVTATCGARNIELVKSLGADEVLDYKT--PDGAALKSPSGRKYDAVINCVTG 229
           +KLG   V +T  A   + +K LGA EV+D +   P G  L+     ++   ++ V G
Sbjct: 167 SKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEK---ERWAGAVDTVGG 221

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 85.3 bits (212), Expect = 7e-19
 Identities = 63/236 (26%), Positives = 93/236 (39%), Gaps = 44/236 (18%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A  Y+ +G     L+  EVP P P  D  +++VEA  +   DW   +G          
Sbjct: 1   MRAAVYEEFG---EPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQG--HDPDV-TL 54

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG-------------------------- 100
           P +P  + AG V+ +G +V  ++VGD+V                                
Sbjct: 55  PHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTH 114

Query: 101 -GGLAEF-AV--AKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKN 156
            G  AE+ AV  A  +L V  P +V     AG+ C   TA +AL     VK    G+   
Sbjct: 115 PGSFAEYVAVPRADVNL-VRLPDDVDFVTAAGLGCRFATAFRALVHQARVK---PGE--- 167

Query: 157 ILITAASGAVGLYAVQLAK-LGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAA 211
            +     G VGL AV +A  LG   +        +EL + LGA   ++    +  A
Sbjct: 168 WVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVA 223

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 81.0 bits (201), Expect = 2e-17
 Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 33/204 (16%)

Query: 16  GGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGML---RPFLPRKFPFIPAS 72
           GG  A L+  E+      + +  ++V  +++N  D     G+    +  + R FP +P  
Sbjct: 11  GGTSAELR--ELDESDLPEGDVTVEVHYSTLNYKD-----GLAITGKGGIVRTFPLVPGI 63

Query: 73  DVAGEVIGLGSEVKNFKVGDKVVAVLSG--------GGLAEFAVAKESLTVARPQEVSAA 124
           D+AG V+   S    FK GD+VV  L+G        GG A+ A  K    V  P+ +SA 
Sbjct: 64  DLAGTVVE--SSSPRFKPGDRVV--LTGWGVGERHWGGYAQRARVKADWLVPLPEGLSAR 119

Query: 125 EGAGIPCAGLTAH---QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ-LAKLGNTH 180
           +   I  AG TA     AL    GV          +L+T A+G VG  AV  LA+LG   
Sbjct: 120 QAMAIGTAGFTAMLCVMALEDH-GVTPGDG----PVLVTGAAGGVGSVAVALLARLGY-E 173

Query: 181 VTATCG-ARNIELVKSLGADEVLD 203
           V A+ G     + ++SLGA E++D
Sbjct: 174 VVASTGRPEEADYLRSLGASEIID 197

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 80.4 bits (199), Expect = 5e-17
 Identities = 71/243 (29%), Positives = 101/243 (41%), Gaps = 43/243 (17%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
             AVQ    GG    L+ VE  VP P   E L+KVEA  +   D  +++G   P L   +
Sbjct: 1   YKAVQVTEPGGP---LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEG-AMPGL--SY 54

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGD----------------------------KVVAVL 98
           P +P  +V G +  +G  V  +KVGD                            KV  V 
Sbjct: 55  PRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVT 114

Query: 99  SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNIL 158
             GG AE+ +A        P ++ AAE A + CAG+T   AL  S         +  +++
Sbjct: 115 RDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNS-------GAKPGDLV 167

Query: 159 ITAASGAVGLYAVQLA-KLGNTHVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPS 216
                G +G  AVQ A K+G   V  + G+   +L + LGA   +D    D   AL+   
Sbjct: 168 AVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELG 227

Query: 217 GRK 219
           G K
Sbjct: 228 GAK 230

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 79.7 bits (197), Expect = 6e-17
 Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 21/208 (10%)

Query: 33  NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGD 92
            + + L++V  +S+N  D        +  + +++PFIP  D+AG V+   S    FK GD
Sbjct: 26  PEGDVLIRVAYSSVNYKDGLASIPGGK--IVKRYPFIPGIDLAGTVVE--SNDPRFKPGD 81

Query: 93  KVVA------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGV 146
           +V+       V   GG +E+A       V  P+ ++  E   +  AG TA      +L +
Sbjct: 82  EVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTA------ALSI 135

Query: 147 -KLDGSG---QQKNILITAASGAVGLYAVQ-LAKLGNTHVTATCGARNIELVKSLGADEV 201
            +L+ +G   +Q  +L+T A+G VG  AV  LAKLG   V +T  A   + +K LGA EV
Sbjct: 136 HRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEV 195

Query: 202 LDYKTPDGAALKSPSGRKYDAVINCVTG 229
           +  +     ++K    +++   ++ V G
Sbjct: 196 IPREELQEESIKPLEKQRWAGAVDPVGG 223

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 79.8 bits (197), Expect = 1e-16
 Identities = 63/241 (26%), Positives = 100/241 (41%), Gaps = 53/241 (21%)

Query: 7   MHA--VQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASIN-------------PIDW 51
           M+A  ++ + YG     ++  +VPVP     E L+ V AA +N                 
Sbjct: 13  MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAA 72

Query: 52  KLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG----------- 100
           + ++G   P+       I  SD +G V  +G  VKN+KVGD+VV   S            
Sbjct: 73  RQRRGRDEPY------HIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGG 126

Query: 101 -----------------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQS 143
                            G  A+FA+ + +  + +P+ +S  E A     G TA++ L   
Sbjct: 127 DPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLF-- 184

Query: 144 LGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHVTATCGARNIELVKSLGADEVL 202
            G   +      N+LI  ASG +G  A+QLA+  G   V         E  ++LGA+ V+
Sbjct: 185 -GWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVI 243

Query: 203 D 203
           +
Sbjct: 244 N 244

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 78.6 bits (194), Expect = 2e-16
 Identities = 84/382 (21%), Positives = 138/382 (36%), Gaps = 94/382 (24%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
             AV Y   GGG   L+    P+P P   + L++V A  I   D  + +G   PF+P   
Sbjct: 2   KAAVVY--VGGGDVRLEEPPPPIPGP--GDVLIRVTATGICGSDLHIYRGG-EPFVPPGD 56

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVA------------------------------ 96
             +   +  GEV+ +G  V+ FKVGD+VV                               
Sbjct: 57  IILG-HEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAG 114

Query: 97  --VLSGGGLAEFAVAKESLTVARPQE-VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQ 153
                 GG AE+        +A+  + +     A       TA+    +   V+  G+  
Sbjct: 115 LGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLA-TAYHGHAERAAVRPGGT-- 171

Query: 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNI----------ELVKSLGADEVLD 203
              +++  A G +GL A+ LAKL         GA  +          EL K  G  +V+ 
Sbjct: 172 ---VVVVGA-GPIGLLAIALAKLL--------GASVVIVVDRSPERLELAKEAGGADVVV 219

Query: 204 YKTPDGAALKS---PSGRKYDAVINCVTGIPWSTFEP------------NLGTTGKVIDF 248
             + D A  +      GR  D VI  V G P    +              +G  G     
Sbjct: 220 NPSEDDAGAEILELTGGRGADVVIEAV-GSP-PALDQALEALRPGGTVVVVGVYGGEDIP 277

Query: 249 NPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL--KTVIDSKHSLSK 306
            P+  V+     K+LT           S + +  +  + L+  GK+  + +I  +  L  
Sbjct: 278 LPAGLVV----SKELTL----RGSLRPSGRED-FERALDLLASGKIDPEKLITHRLPLDD 328

Query: 307 AEDAWAKSISGRAT-GKIIVEP 327
           A +A+      +    K++++P
Sbjct: 329 AAEAYELFADRKEEAIKVVLKP 350

Length = 350

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 77.5 bits (191), Expect = 6e-16
 Identities = 64/218 (29%), Positives = 90/218 (41%), Gaps = 46/218 (21%)

Query: 26  EVPVPTPNKDEALLKVEAASIN----------PIDWKLQKGMLRPFLPRKFPF-IPASDV 74
            VPVP     E L+ V AA +N          P+        LR +     PF I  SD 
Sbjct: 29  VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVS---TFAFLRKYGKLDLPFHIIGSDA 85

Query: 75  AGEVIGLGSEVKNFKVGDKVVA-----------------VLSG-----------GGLAEF 106
           +G V  +G  V  +KVGD+VVA                 +LS            G  AEF
Sbjct: 86  SGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQRIWGYETNFGSFAEF 145

Query: 107 AVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV 166
           A+ K+   + +P+ ++  E A     G TA++ L       +       N+LI  A+G +
Sbjct: 146 ALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPAAVK---PGDNVLIWGAAGGL 202

Query: 167 GLYAVQLAK-LGNTHVTATCGARNIELVKSLGADEVLD 203
           G YA QLA+  G   V         E  +SLGA+ V+D
Sbjct: 203 GSYATQLARAGGGNPVAVVSSPEKAEYCRSLGAEAVID 240

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 76.5 bits (189), Expect = 9e-16
 Identities = 64/220 (29%), Positives = 88/220 (40%), Gaps = 54/220 (24%)

Query: 21  GLKHVEVPVPTPNKDEALLKVEAASINPID--------WKLQKGMLRPFLPRKFPFIPAS 72
           G + VEVPVP P   E L+KV AASI   D        W   +         K P I   
Sbjct: 12  GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSR--------IKPPLIFGH 63

Query: 73  DVAGEVIGLGSEVKNFKVGDKVVA---------------------------VLSGGGLAE 105
           + AGEV+ +G  V   KVGD V A                           V + G  AE
Sbjct: 64  EFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAE 123

Query: 106 FAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA 165
           + V  E       +++     +     G   H  L   +      SG  K++LIT   G 
Sbjct: 124 YVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVLAGDV------SG--KSVLITGC-GP 174

Query: 166 VGLYAVQLAKL-GNTHVTAT-CGARNIELVKSLGADEVLD 203
           +GL A+ +AK  G + V A+      +EL K +GAD V++
Sbjct: 175 IGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVIN 214

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 74.9 bits (185), Expect = 3e-15
 Identities = 90/371 (24%), Positives = 130/371 (35%), Gaps = 107/371 (28%)

Query: 26  EVPVPTPNKDEALLKVEAASI----------NPIDWKLQKGMLRPFLP---------RKF 66
           EVP P     E  +KV    I           PI           F+P            
Sbjct: 16  EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPI-----------FIPTEGHPHLTGETA 64

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAV--------------------------LS- 99
           P     + +G V+ +GS V  FKVGD+VV                            L  
Sbjct: 65  PVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGG 124

Query: 100 -GGGLAEFAVAKESLTVARPQEVSAAEGAGI-PCAGLTAHQALTQSLGVKLDGSGQQKNI 157
            GGG AE+ V         P  V   E A + P A   A  A+ +S G K   +      
Sbjct: 125 GGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLA--VAWHAVRRS-GFKPGDT-----A 176

Query: 158 LITAASGAVGLYAVQLAK---LGNTHVTATCGARNIELVKSLGADEVLDYKTPD-GAALK 213
           L+  A G +GL  +   K        V+    AR  EL + LGA  VLD    D  A ++
Sbjct: 177 LVLGA-GPIGLLTILALKAAGASKIIVSEPSEAR-RELAEELGATIVLDPTEVDVVAEVR 234

Query: 214 SPSGRK-YDAVINCVTGIPWSTFEPNLGTT------------GKVIDFNPSPRVLLTFAW 260
             +G    D   +C  G+  +T +  +                K I FNP+    L    
Sbjct: 235 KLTGGGGVDVSFDC-AGVQ-ATLDTAIDALRPRGTAVNVAIWEKPISFNPN---DLVLKE 289

Query: 261 KKLTFSKKQLVPFSVSPKGENLDF--LVKLVKEGKL--KTVIDSKHSLSKA-EDAWAKSI 315
           K LT S         + +    DF  ++ L+  GK+  + +I S+  L    E  + + I
Sbjct: 290 KTLTGS------ICYTRE----DFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELI 339

Query: 316 SGRATG-KIIV 325
           + +    KI+V
Sbjct: 340 NDKEQHVKILV 350

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 72.6 bits (179), Expect = 2e-14
 Identities = 73/266 (27%), Positives = 94/266 (35%), Gaps = 69/266 (25%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A     +G     L+  EVPVP P   E L+KV A  I   D K  +G        K 
Sbjct: 1   MKAAVL--HGPNDVRLE--EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDL---KP 53

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVA---------------------------VLS 99
           P I   ++AGE++ +G  V  FKVGD+V                              L 
Sbjct: 54  PRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLY 113

Query: 100 GGGLAEFAV-----AKESLTVARPQEVSAAEGAGI-PCAGLTAHQALTQSLGVKLDGSGQ 153
            GG AE+        K    +  P  VS  E A + P A      A     G+K   +  
Sbjct: 114 DGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLA--CCINAQR-KAGIKPGDT-- 168

Query: 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNI----------ELVKSLGADEVLD 203
              +L+  A G +GL    LAK          GAR +          E  K LGAD  +D
Sbjct: 169 ---VLVIGA-GPIGLLHAMLAKA--------SGARKVIVSDLNEFRLEFAKKLGADYTID 216

Query: 204 YKTPDGAA--LKSPSGRKYDAVINCV 227
               D      +   GR  D VI   
Sbjct: 217 AAEEDLVEKVRELTDGRGADVVIVAT 242

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 71.1 bits (175), Expect = 5e-14
 Identities = 96/349 (27%), Positives = 145/349 (41%), Gaps = 58/349 (16%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVP---VPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLP 63
           M A+  + YG  +  +K + +P   VP P   E L+KVEAA INP D    KG       
Sbjct: 1   MKALLLEEYGKPLE-VKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQY--GST 57

Query: 64  RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG--GGLAEFAVAKESLTVARPQEV 121
           +  P  P  + +G V+  G       +  K VA L+G  G  AE+AVA     +  P  V
Sbjct: 58  KALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGV 117

Query: 122 SAAEGAGIPCA---GLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN 178
           S  +GA    +    LTA   + ++   + +G+   K ++ TAA+ A+G   V+L K   
Sbjct: 118 SFEQGA---SSFVNPLTA-LGMLET--AREEGA---KAVVHTAAASALGRMLVRLCKADG 168

Query: 179 THVTATC-GARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVI--NCVTGIPWST 234
             V         ++L+K +GA+ VL+   PD    LK     K +A I  + V G     
Sbjct: 169 IKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELI-AKLNATIFFDAVGG----- 222

Query: 235 FEPNLGTTGKVI-------------------DFNPSPRVLLTFAWKKLTFSKKQLVPFSV 275
                G TG+++                   D    P  L+        F    L  +  
Sbjct: 223 -----GLTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFW---LTTWLQ 274

Query: 276 SPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKII 324
               E +  L KLVK  +LKT   S++ L+   +A A      +TGK +
Sbjct: 275 KLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKL 322

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 71.6 bits (176), Expect = 6e-14
 Identities = 94/370 (25%), Positives = 142/370 (38%), Gaps = 88/370 (23%)

Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85
           E+PVP P + E L++V A  +   D  + KG L PF P   PF+   +++GEV+ +G  V
Sbjct: 17  EIPVPRPKEGEILIRVAACGVCHSDLHVLKGEL-PFPP---PFVLGHEISGEVVEVGPNV 72

Query: 86  KN---FKVGDKVV----------------------------------------------- 95
           +N     VGD+VV                                               
Sbjct: 73  ENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGG 132

Query: 96  --AVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQ 153
              + S GGLAE+AV   +     P+ +   E A + CAG TA+ AL  +         +
Sbjct: 133 PVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHA------ADVR 186

Query: 154 QKNILITAASGAVGLYAVQLAK-LGNTHVTATCGARN--IELVKSLGADEVLDYKTPD-- 208
               +     G VG  A+QLAK  G + + A    R+  +   K LGA   ++    D  
Sbjct: 187 PGETVAVIGVGGVGSSAIQLAKAFGASPIIAV-DVRDEKLAKAKELGATHTVNAAKEDAV 245

Query: 209 GAALKSPSGRKYDAVINCVTGIPWSTFEPNL---GTTGKVIDFNPSPRVLLTFAWKKLTF 265
            A  +   GR  D V+  + G P  TF+  L      G+ +       V L         
Sbjct: 246 AAIREITGGRGVDVVVEAL-GKP-ETFKLALDVVRDGGRAV------VVGLAPGGATAEI 297

Query: 266 SKKQLVPFSVSPKGE-------NLDFLVKLVKEGKL--KTVIDSKHSLSKAEDAWAKSIS 316
              +LV   +   G        +L  LV L   GKL  + ++  K+ L +  +A+     
Sbjct: 298 PITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRK 357

Query: 317 GRATGKIIVE 326
           G   G+ IVE
Sbjct: 358 GLIHGRAIVE 367

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 68.9 bits (169), Expect = 3e-13
 Identities = 58/225 (25%), Positives = 90/225 (40%), Gaps = 54/225 (24%)

Query: 7   MHA-VQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRK 65
           M A V+     G V   +  EVP P P   E L+KV AA I   D  + KG    + P +
Sbjct: 1   MKALVKTGPGPGNV---ELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKG---DYDPVE 54

Query: 66  FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG------------------------- 100
            P +   + +G ++ +G +V+ +KVGD+VV+  +                          
Sbjct: 55  TPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGT 114

Query: 101 ---GGLAEFAVAKESLTVARPQEVSAAEGAGI-PCAGLTAHQALTQSLGVKLDGSGQQKN 156
              GG AE+ +  E      P+ +S    A   P A   A  A+ +  G++   +     
Sbjct: 115 QADGGFAEYVLVPEESLHELPENLSLEAAALTEPLA--VAVHAVAERSGIRPGDT----- 167

Query: 157 ILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEV 201
            ++    G +GL A Q+AKL         GA  +  V     DEV
Sbjct: 168 -VVVFGPGPIGLLAAQVAKL--------QGATVV--VVGTEKDEV 201

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 67.8 bits (166), Expect = 7e-13
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 13/202 (6%)

Query: 10  VQYDSYGG-GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPF 68
           +++  +GG  V  L+ VE     P ++E  ++ +A  IN ID  ++ G+   + P   P 
Sbjct: 5   IEFHKHGGPEV--LQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGL---YPPPSLPS 59

Query: 69  IPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG-GGLAEFAVAKESLTVARPQEVSAAEGA 127
              ++ AG V  +GS VK+ KVGD+VV   S  G  +             P  +S  + A
Sbjct: 60  GLGTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAA 119

Query: 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG- 186
                GLT +  L ++  +K D     +  L  AA+G VGL A Q AK     +  T G 
Sbjct: 120 ASFLKGLTVYYLLRKTYEIKPD-----EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGS 174

Query: 187 ARNIELVKSLGADEVLDYKTPD 208
           A+  +  K  GA +V++Y+  +
Sbjct: 175 AQKAQRAKKAGAWQVINYREEN 196

Length = 327

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 66.8 bits (164), Expect = 2e-12
 Identities = 64/245 (26%), Positives = 99/245 (40%), Gaps = 44/245 (17%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81
           L+ V++P P P   E L++V+   I   D  +  G   PF    +P I   +++GEV+ +
Sbjct: 12  LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHG-RNPFA--SYPRILGHELSGEVVEV 68

Query: 82  GSEVKNFKVGDKVVA---------------------------VLSGGGLAEFAVAKESLT 114
           G  V   KVGD+VV                            V   GG AE+ V      
Sbjct: 69  GEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPADA- 127

Query: 115 VARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLA 174
           +  P+ +S  + A +    + AH        V+  G      +L+  A G +GL  +Q+A
Sbjct: 128 LLVPEGLSLDQAALVEPLAIGAH-------AVRRAGVTAGDTVLVVGA-GPIGLGVIQVA 179

Query: 175 KLGNTHVTATCGARN-IELVKSLGADEVLDYKTPDGAALKSP--SGRKYDAVINCVTGIP 231
           K     V         +E  + LGAD+ ++    D AA       G   D VI+  TG P
Sbjct: 180 KARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDA-TGNP 238

Query: 232 WSTFE 236
            ++ E
Sbjct: 239 -ASME 242

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 35 DEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKV 94
           E L++V+AA I   D  + +G      P K P I   + AG V  +G  V   KVGD+V
Sbjct: 2  GEVLVRVKAAGICGSDLHIYRGE---PPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRV 58

Query: 95 VA 96
          V 
Sbjct: 59 VV 60

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 66.0 bits (162), Expect = 3e-12
 Identities = 59/228 (25%), Positives = 89/228 (39%), Gaps = 70/228 (30%)

Query: 21  GLKHVEVPVPTPNKDEALLKVEAASI--------NPIDWKLQKGMLRPFLPRKFPFIPAS 72
           GL   +VPVP P  ++ L+KV+  +I        N  +W   +  +        P +   
Sbjct: 12  GLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWA--QKTIPV------PMVVGH 63

Query: 73  DVAGEVIGLGSEVKNFKVGDKV---------------------------VAVLSGGGLAE 105
           +  GEV+ +GSEV  FKVGD+V                           V V   G  AE
Sbjct: 64  EFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAE 123

Query: 106 FAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA 165
           + V         P ++     A     G   H AL+  L       G  +++LIT A G 
Sbjct: 124 YLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALSFDL------VG--EDVLITGA-GP 174

Query: 166 VGLYAVQLAKLGNTHVTATCGARNI----------ELVKSLGADEVLD 203
           +G+ A  +AK    HV    GAR++          EL + +GA   ++
Sbjct: 175 IGIMAAAVAK----HV----GARHVVITDVNEYRLELARKMGATRAVN 214

Length = 341

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 69/270 (25%), Positives = 96/270 (35%), Gaps = 33/270 (12%)

Query: 56  GMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTV 115
           G+         P  P     G V+ +GS V  FK GD+V      G  AE  V   +L V
Sbjct: 10  GLSTGTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVF---CFGPHAERVVVPANLLV 66

Query: 116 ARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK 175
             P  +     A      L A  AL    GV+       + + +    G VGL A QLAK
Sbjct: 67  PLPDGLPPERAA---LTAL-AATALN---GVRDAEPRLGERVAVVGL-GLVGLLAAQLAK 118

Query: 176 L-GNTHVTAT-CGARNIELVKSLG-ADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP- 231
             G   V      A   EL ++LG AD V               GR  D VI   +G P 
Sbjct: 119 AAGAREVVGVDPDAARRELAEALGPADPVAA------DTADEIGGRGADVVI-EASGSPS 171

Query: 232 -WSTFEPNLGTTGKVI------DFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKG----E 280
              T    L   G+V+                 F    +  S+   +     P+      
Sbjct: 172 ALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEAR 231

Query: 281 NLDFLVKLVKEGKLKTVIDSKHSLSKAEDA 310
           NL+  + L+ EG+L+ +I  +     A +A
Sbjct: 232 NLEEALDLLAEGRLEALITHRVPFEDAPEA 261

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 65.7 bits (161), Expect = 4e-12
 Identities = 66/257 (25%), Positives = 84/257 (32%), Gaps = 64/257 (24%)

Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85
           EVP+P       L++V  A +   D     G  RP +P   P I   +  G V+ LG  V
Sbjct: 17  EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGR-RPRVP--LPIILGHEGVGRVVALGGGV 73

Query: 86  KNF------KVGDKVV---AVLSG-------------------------------GGLAE 105
                    KVGD+V        G                               GG AE
Sbjct: 74  TTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAE 133

Query: 106 FAVAKESLTVAR-PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQ---KNILITA 161
                    + R P  V     A   CA  T   AL        D +G       +++  
Sbjct: 134 HIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAAL--------DRAGPVGAGDTVVVQG 185

Query: 162 ASGAVGLYAVQLAKL-GNTHVTATCG-ARNIELVKSLGADEVLDYKTPD-----GAALKS 214
           A G +GLYAV  AKL G   V    G    +EL +  GAD  +D                
Sbjct: 186 A-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDI 244

Query: 215 PSGRKYDAVINCVTGIP 231
             GR  D VI   +G P
Sbjct: 245 TGGRGADVVIEA-SGHP 260

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score = 63.8 bits (156), Expect = 2e-11
 Identities = 90/336 (26%), Positives = 129/336 (38%), Gaps = 61/336 (18%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81
            + VE  +P     E L +    S++P         +RP+  R         + G  +  
Sbjct: 21  FELVEEELPPLKDGEVLCEALFLSVDPY--------MRPYSKRLNEGDT---MIGTQVAK 69

Query: 82  GSEVKN--FKVGDKVVA--------VLSGGGLAEFAVAKESLTVARPQEVSAAEGA-GIP 130
             E KN  F VG  VVA        V  G    +       L    P   S A G  G+P
Sbjct: 70  VIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYKLPADLPDDLPP--SLALGVLGMP 127

Query: 131 CAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RN 189
             GLTA+  L +    K       + +++  A+GAVG    Q+AK+    V    G+   
Sbjct: 128 --GLTAYFGLLEICKPKAG-----ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDK 180

Query: 190 IELVKSLGADEVLDYKTPD-GAALK--SPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI 246
           +  +K LG D V +YKT     ALK  +P G   D   + V G   ST   ++   G+V 
Sbjct: 181 VAWLKELGFDAVFNYKTVSLEEALKEAAPDG--IDCYFDNVGGEFSSTVLSHMNDFGRVA 238

Query: 247 ------DFNPSPRVLLTFAWKKLTFSKKQLVP--FSVS------PKGENLDFLVKLVKEG 292
                  +N        +  + + F  KQL    F V       P+   L  L+K +KEG
Sbjct: 239 VCGSISTYNDKEPKKGPYVQETIIF--KQLKMEGFIVYRWQDRWPEA--LKQLLKWIKEG 294

Query: 293 KLK---TVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
           KLK    V +          A+   + G  TGK IV
Sbjct: 295 KLKYREHVTE---GFENMPQAFIGMLKGENTGKAIV 327

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 62.5 bits (153), Expect = 4e-11
 Identities = 60/227 (26%), Positives = 88/227 (38%), Gaps = 59/227 (25%)

Query: 63  PRKFPFIPASDVAGEVIGLGSEVKNFKVGDKV------------VAVLSG---------- 100
           P K+P +P  ++ G V+ +GS+V  FKVGD+V                SG          
Sbjct: 50  PTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVV 109

Query: 101 -------------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVK 147
                        GG A+  V  E      P+ + +A  A + CAG+T +  L +  GV 
Sbjct: 110 TYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKR-NGVG 168

Query: 148 LDGSGQQKNILITAASGAVGL-----YAVQLAK-LGNTHVTA-TCGARNIELVKSLGADE 200
                           G VG+      AV+ AK LG   VTA +      E    LGADE
Sbjct: 169 P-----------GKRVGVVGIGGLGHLAVKFAKALG-AEVTAFSRSPSKKEDALKLGADE 216

Query: 201 VLDYKTPDGAALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVI 246
            +   T D  A+K  +G   D +I+ V+       +   L   G ++
Sbjct: 217 FIA--TKDPEAMKKAAG-SLDLIIDTVSASHDLDPYLSLLKPGGTLV 260

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 62.5 bits (152), Expect = 5e-11
 Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 43/175 (24%)

Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKV-VAVLSG----------------------- 100
            +P +P  +V GEV+ +GS+V  F VGD V V V+ G                       
Sbjct: 62  NYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSY 121

Query: 101 -----------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLD 149
                      GG A   V  +   V  P+ ++  + A + CAG+T +  L+      L 
Sbjct: 122 NDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSH---FGLK 178

Query: 150 GSGQQKNILITAASGAVGLYAVQLAKLGNTHVT--ATCGARNIELVKSLGADEVL 202
            SG +  IL     G VG   V++AK    HVT  ++   +  E ++ LGAD+ L
Sbjct: 179 QSGLRGGIL---GLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYL 230

Length = 357

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 59.2 bits (143), Expect = 6e-10
 Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 44/230 (19%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81
           L+ VE PVP P   E L++V A  +   D  + +G L    PR     P  +V GEV G 
Sbjct: 15  LRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPR---VTPGHEVVGEVAGR 71

Query: 82  GSEVKNFKVGDKV-VAVL---------------------------SGGGLAEFAVAKESL 113
           G++   F VGD+V +A L                           + GG AE+     + 
Sbjct: 72  GADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAF 131

Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYA-VQ 172
               P      E A + CAG+  ++AL ++    L   G+   + +    G+  L A V 
Sbjct: 132 AYRLPTGYDDVELAPLLCAGIIGYRALLRA---SLPPGGR---LGLYGFGGSAHLTAQVA 185

Query: 173 LAKLGNTHVTATCGARNIELVKSLGADEVLD-YKTP----DGAALKSPSG 217
           LA+    HV  T GA    L  +LGA      Y TP    D A L +P+G
Sbjct: 186 LAQGATVHVM-TRGAAARRLALALGAASAGGAYDTPPEPLDAAILFAPAG 234

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 59.2 bits (144), Expect = 6e-10
 Identities = 96/365 (26%), Positives = 137/365 (37%), Gaps = 62/365 (16%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPR-K 65
           M A+ Y   G G  GL+ V  P      D A+++V A SI   D  + +G +    P  K
Sbjct: 1   MKALVY--LGPGKIGLEEVPDPKIQGPHD-AIVRVTATSICGSDLHIYRGGV----PGAK 53

Query: 66  FPFIPASDVAGEVIGLGSEVKNFKVGDKVV------------------AVLSGGGLAEFA 107
              I   +  GEV+ +GS+VK  K GD+V                   A    G      
Sbjct: 54  HGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKL 113

Query: 108 VAKESLTVARPQEVSAAEG--AGIPCAGLTAHQALTQS-------LGVKLDGSGQQKNIL 158
             +     A    V  A+   A IP  GL    AL  S        G +L G      + 
Sbjct: 114 GNRIDGGQAEYVRVPYADMNLAKIP-DGLPDEDALMLSDILPTGFHGAELAGIKPGSTVA 172

Query: 159 ITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIELVKSLGADEVLDYKTPDGAA--LKS 214
           +  A G VGL AV  A+L          +    ++L K  GA ++++ K  D     L+ 
Sbjct: 173 VIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILEL 231

Query: 215 PSGRKYDAVINCVTGIPWSTFE-------PNLGTTGKVIDF-NPSPRVLLTFAW-KKLTF 265
             GR  D VI  V G    TFE       P  GT   V  +  P P  LL   + K LTF
Sbjct: 232 TGGRGVDCVIEAV-GFE-ETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTF 288

Query: 266 SKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATG-K 322
                      P    +  L+ L++EGK+    +I  +  L     A+    +      K
Sbjct: 289 KTGL------VPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIK 342

Query: 323 IIVEP 327
           +++ P
Sbjct: 343 VVIRP 347

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 59.2 bits (144), Expect = 7e-10
 Identities = 55/239 (23%), Positives = 82/239 (34%), Gaps = 51/239 (21%)

Query: 26  EVPVPTPNKDEALLKVEAASINPID---WKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG 82
           E P P P   E  ++V A  I   D   +  Q G       R+ P +   +V+G V  +G
Sbjct: 13  ERPAPEPGPGEVRVRVAAGGICGSDLHYY--QHGGFGTVRLRE-PMVLGHEVSGVVEAVG 69

Query: 83  SEVKNFKVGDKVVAV------------LSG---------------------GGLAEFAVA 109
             V     G +V AV             +G                     GG  E+ V 
Sbjct: 70  PGVTGLAPGQRV-AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVV 128

Query: 110 KESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLY 169
             S  V  P  +S    A      +  H        V   G    K +L+T A G +G  
Sbjct: 129 DASQCVPLPDGLSLRRAALAEPLAVALH-------AVNRAGDLAGKRVLVTGA-GPIGAL 180

Query: 170 AVQLAKL-GNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINC 226
            V  A+  G   + AT      + + +++GADE ++      AA  +  G  +D V   
Sbjct: 181 VVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGD-FDVVFEA 238

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 55/177 (31%), Positives = 75/177 (42%), Gaps = 12/177 (6%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGM--LRPFLPR 64
           M A  +  +G     L+  EVP PTP   E L++   + I+  D    +G    +P LP 
Sbjct: 1   MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPA 60

Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAA 124
               I  S+  G V  +G  VK  +VG +V      G  AE+ VA     V  P  +S  
Sbjct: 61  ----IGGSEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDE 116

Query: 125 EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV 181
             A +    L+A   L   LGVK    GQ   ++  AA GAVG     LA     +V
Sbjct: 117 VAAQLIAMPLSALMLL-DFLGVK---PGQW--LIQNAAGGAVGKLVAMLAAARGINV 167

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 54.2 bits (131), Expect = 3e-09
 Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 165 AVGLYAVQLAK-LGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKY 220
            VGL AVQLAK LG   V A       +EL K LGAD V++Y+  D      +   GR  
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60

Query: 221 DAVINCV 227
           D VI+CV
Sbjct: 61  DVVIDCV 67

Length = 131

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 60/214 (28%), Positives = 82/214 (38%), Gaps = 19/214 (8%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84
            E P PTP   + L++VE   +   D          F+    P  P  +  G V+ LG  
Sbjct: 10  EEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPG 69

Query: 85  VKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCA-GLTAHQALTQS 143
           V+   VGD+ VA LSGG  AE+ +A     V  P  +      G P    L   +     
Sbjct: 70  VRGLAVGDR-VAGLSGGAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCALNVFRRGWIR 128

Query: 144 LGVKLDGSGQQKNILITAASGAVGLYAVQLAKL-GNTHVTATC--GARNIELVKSLGADE 200
            G         K + +  A G +GL  +QLA   G   V A     AR + L + LGA E
Sbjct: 129 AG---------KTVAVIGA-GFIGLLFLQLAAAAGARRVIAIDRRPAR-LALARELGATE 177

Query: 201 VLDYKTPDGAAL--KSPSGRKYDAVINCVTGIPW 232
           V+   +        +   G   D VI    G  W
Sbjct: 178 VVTDDSEAIVERVRELTGGAGADVVIE-AVGHQW 210

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 56.4 bits (136), Expect = 5e-09
 Identities = 93/357 (26%), Positives = 133/357 (37%), Gaps = 76/357 (21%)

Query: 21  GLKHVEVPVPTPNKDEALLKVEAASINPID--------WKLQKGMLRPFLPRKFPFIPAS 72
           G +  EVPVP P   E L+KV A SI   D        W   +         K P +   
Sbjct: 10  GAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSR--------IKPPQVVGH 61

Query: 73  DVAGEVIGLGSEVKNFKVGDKV---------------------------VAVLSGGGLAE 105
           +VAGEV+G+G  V+  KVGD V                             V + G  AE
Sbjct: 62  EVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAE 121

Query: 106 FAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA 165
           +AV         P+ +           G   H  L   +      SG  K++L+T A G 
Sbjct: 122 YAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVLAGPI------SG--KSVLVTGA-GP 172

Query: 166 VGLYAVQLAK-LGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGAALKSP--SGRKYD 221
           +GL A+ +AK  G   V  +      +EL K +GA  V++    D     +    G   D
Sbjct: 173 IGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVD 232

Query: 222 AVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRV-LLTFAWKKLTFSKKQLVPF-SVSPKG 279
             +  ++G P    E  L          P  RV LL     K+T      V F  ++  G
Sbjct: 233 VFLE-MSGAP-KALEQGLQAV------TPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYG 284

Query: 280 -------ENLDFLVKLVKEGK--LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
                  E    + +L++ GK  L  +I  K    K E  +    SG+ TGK+I+  
Sbjct: 285 ITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQ-TGKVILSL 340

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 59/226 (26%), Positives = 87/226 (38%), Gaps = 54/226 (23%)

Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLR----PFLPR--KFPFIPASDVAGEVI 79
           EVPVP P   E L+KVEA  I   D K   G          P   K P IP  +  G V+
Sbjct: 16  EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVV 75

Query: 80  GLGSEVKN--FKVGDKVVAV-----------------------LSG------GGLAEFAV 108
            LG   +    KVGD+V++                        L G      GG+AE+  
Sbjct: 76  ELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMR 135

Query: 109 -AKESLTVARPQEVSAAEGAGI---PCAGLTAHQALTQSLGVKLDGSGQQKNILITAASG 164
             KE++    P ++   +   I    CA     +A      +K D      ++++ A +G
Sbjct: 136 FPKEAIVHKVPDDIPPEDAILIEPLACALHAVDRA-----NIKFD------DVVVLAGAG 184

Query: 165 AVGLYAVQLAKLGN--THVTATCGARNIELVKSLGADEVLDYKTPD 208
            +GL  +  A+L N    +        + L +  GAD VL+    D
Sbjct: 185 PLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVD 230

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 54.8 bits (133), Expect = 2e-08
 Identities = 65/246 (26%), Positives = 95/246 (38%), Gaps = 54/246 (21%)

Query: 26  EVPVPTPNKDEALLKVEAASINPID---WKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG 82
           E P+P P   E L++V A  I   D   +K   G +  F+ ++ P +   + AG V+ +G
Sbjct: 14  ERPIPEPGPGEVLVRVRAVGICGSDVHYYK--HGRIGDFVVKE-PMVLGHESAGTVVAVG 70

Query: 83  SEVKNFKVGDKVV-----------AVLSG-----------------GGLAEFAVAKESLT 114
           S V + KVGD+V               SG                 G L  +        
Sbjct: 71  SGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFC 130

Query: 115 VARPQEVSAAEGAGI-PCA-GLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ 172
              P  VS  EGA + P + G+ A     +  GV+         +L+  A G +GL    
Sbjct: 131 HKLPDNVSLEEGALVEPLSVGVHA----CRRAGVRPG-----DTVLVFGA-GPIGLLTAA 180

Query: 173 LAK-LGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDG-----AALKSPSGRKYDAVIN 225
           +AK  G T V  T      +E  K LGA   ++ +T D         +   G+  D VI 
Sbjct: 181 VAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIE 240

Query: 226 CVTGIP 231
           C TG  
Sbjct: 241 C-TGAE 245

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 80/362 (22%), Positives = 117/362 (32%), Gaps = 105/362 (29%)

Query: 5   AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPR 64
           AV+H V      G    L+  EV +  P   E L+++ AA +   D  +  G L    P 
Sbjct: 4   AVLHEV------GKP--LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDL----PA 51

Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG------------------------ 100
             P +   + AG V  +G  V   K GD VV                             
Sbjct: 52  PLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILG 111

Query: 101 -----------------------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAH 137
                                  G  AE+ V  E+  V    ++     A + C   T  
Sbjct: 112 GQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGV 171

Query: 138 QALTQSLGVKLDGSGQQKNILITAA---SGAVGLYAVQLAKLGNTHVTATCGARNI---- 190
            A+  +  V+    G       T A    G VGL A+Q A++         GA  I    
Sbjct: 172 GAVVNTARVR---PGD------TVAVIGCGGVGLNAIQGARI--------AGASRIIAVD 214

Query: 191 ------ELVKSLGADEVLDYKTPDGAALKSP--SGRKYDAVINCVTGIPWSTFEPNLGTT 242
                 EL +  GA   ++    D          GR  D     V G   +T    L  T
Sbjct: 215 PVPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAV-GRA-ATIRQALAMT 272

Query: 243 GK----VIDFNPSPRVLLTFAWKKLTFSKKQLVPF---SVSPKGENLDF--LVKLVKEGK 293
            K    V+     P   ++    +L  S+K+L      S +P+    D   L+ L + G+
Sbjct: 273 RKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPR---RDIPRLLDLYRAGR 329

Query: 294 LK 295
           LK
Sbjct: 330 LK 331

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 90/342 (26%), Positives = 145/342 (42%), Gaps = 66/342 (19%)

Query: 22  LKHVEVP--VPTPNKDEALLKVEAASINP-IDWKLQKGMLRPFLPRKFPFIPASDVAGEV 78
           L+  ++   VP     + L+K    S +P +  +++      +LP   PF P   + G  
Sbjct: 23  LRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLP---PFKPGEVITGYG 79

Query: 79  IG--LGSEVKNFKVGDKVVAVLSGGGLAEFAVAK--ESLTVARPQEV--SAAEGA-GIPC 131
           +   + S   +FKVGD V       G  E+++    + L      +V  S   G  G+P 
Sbjct: 80  VAKVVDSGNPDFKVGDLVWGFT---GWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMP- 135

Query: 132 AGLTAHQALTQSLGVKLDGSGQQ-KNILITAASGAVGLYAVQLAKLGNTHVTATCGARN- 189
            GLTA+       G       ++ + + ++AASGAVG    QLAKL   +V  + G+   
Sbjct: 136 -GLTAY------AGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEK 188

Query: 190 IELVKS-LGADEVLDYKT-PD-GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI 246
           ++L+K+ LG D+  +YK  PD  AALK     +Y        GI    +  N+G  GK++
Sbjct: 189 VDLLKNKLGFDDAFNYKEEPDLDAALK-----RY-----FPNGI--DIYFDNVG--GKML 234

Query: 247 D-----FNPSPRVLL-------TFAWKKLTFSKKQLVPFSVSPKG-----------ENLD 283
           D      N   R+            W +   +   ++   V  +G           E L+
Sbjct: 235 DAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLE 294

Query: 284 FLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
            +   +KEGKLK V D    L  A +A+    +G   GK +V
Sbjct: 295 EMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVV 336

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 54.1 bits (130), Expect = 3e-08
 Identities = 63/247 (25%), Positives = 95/247 (38%), Gaps = 63/247 (25%)

Query: 26  EVPVPTPN-KDEALLKVEAASINPIDWKLQKGMLRPFLPRKF-------PFIPASDVAGE 77
           E P+P    +D+ L+KV ++           G+    +PR F       P     + +G 
Sbjct: 16  ESPIPEIKHQDDVLVKVASS-----------GLCGSDIPRIFKNGAHYYPITLGHEFSGY 64

Query: 78  VIGLGSEVKNFKVGDKVVAV---------------------------LSGGGLAEFAVAK 110
           V  +GS V +   GD V  V                              GG AE+ V K
Sbjct: 65  VEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVK 124

Query: 111 ESLTVARPQEVSAAEGAGIP--CAGLTA-HQALTQSLGVKLDGSGQQKNILITAASGAVG 167
                A P ++   +GA I     GL A H A             + KN++I  A G +G
Sbjct: 125 RKNLFALPTDMPIEDGAFIEPITVGLHAFHLA----------QGCEGKNVIIIGA-GTIG 173

Query: 168 LYAVQLAK-LGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGAALKSP-SGRKYDAVI 224
           L A+Q A  LG   VTA    +  + L KSLGA +  + +      ++S     ++D +I
Sbjct: 174 LLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLI 233

Query: 225 NCVTGIP 231
               G+P
Sbjct: 234 LETAGVP 240

Length = 347

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 53.0 bits (127), Expect = 8e-08
 Identities = 55/222 (24%), Positives = 87/222 (39%), Gaps = 51/222 (22%)

Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKV-VAVLSG----------------------- 100
           ++P +P  ++ G V  LG  VK FK GD+V V V+ G                       
Sbjct: 65  RYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTY 124

Query: 101 -----------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLD 149
                      GG ++  V  +   +  P  +    GA + CAG+T +  +      K  
Sbjct: 125 NSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPM------KYY 178

Query: 150 GSGQQKNILITAASGAVGLYAVQLAKLGNTHVT--ATCGARNIELVKSLGADEVLDYKTP 207
           G  +    L  A  G +G  AV++ K     VT  ++   +  E +  LGAD  L   + 
Sbjct: 179 GMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFL--VST 236

Query: 208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLG---TTGKVI 246
           D   +K+  G   D +I+ V+ +      P LG     GK+I
Sbjct: 237 DPEKMKAAIG-TMDYIIDTVSAV--HALGPLLGLLKVNGKLI 275

Length = 360

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 52.7 bits (127), Expect = 8e-08
 Identities = 51/243 (20%), Positives = 80/243 (32%), Gaps = 50/243 (20%)

Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKG---MLRPFLPRKF-----PFIPASDVAGE 77
           +VP P P   + L+KV A  I   D         M+               +   +  GE
Sbjct: 15  DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGE 74

Query: 78  VIGLGSEVKN-FKVGDKVVAV-----------------LSGGGLAEFAVAKESLTVARPQ 119
           V+  G   +   KVG +V ++                  + GG AE+ +  E+L +  P 
Sbjct: 75  VVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPD 134

Query: 120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDG----SGQQKNILITAASGAVGLYAVQLAK 175
            +S  +             ALT+ L V L            + +    G +GL  +   K
Sbjct: 135 GLSMEDA------------ALTEPLAVGLHAVRRARLTPGEVALVIGCGPIGLAVIAALK 182

Query: 176 LGNTH--VTATCGARNIELVKSLGADEVLDYKTPDGAALKSP-----SGRKYDAVINCVT 228
                  V +        L  ++GAD V+D       A  +       G K   +  CV 
Sbjct: 183 ARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECV- 241

Query: 229 GIP 231
           G P
Sbjct: 242 GAP 244

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 51.1 bits (123), Expect = 3e-07
 Identities = 69/252 (27%), Positives = 101/252 (40%), Gaps = 50/252 (19%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84
           +E P+P    ++A+++  A +    D     G        +   I   +  G V  +GSE
Sbjct: 15  IEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGA---PGERHGMILGHEAVGVVEEVGSE 71

Query: 85  VKNFKVGDKVVA-----------------VLSGGGLA--EFAVAKESLTVARPQEVSAAE 125
           VK+FK GD+V+                    SGG L   +F+  K+    A    V+ A+
Sbjct: 72  VKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDG-VFAEYFHVNDAD 130

Query: 126 G--AGIPCAGLTAHQAL------------TQSLGVKLDGSGQQKNILITAASGAVGLYAV 171
              A +P  GLT  QA+             +   +KL  +      +     G VGL AV
Sbjct: 131 ANLAPLP-DGLTDEQAVMLPDMMSTGFHGAELANIKLGDT------VAVFGIGPVGLMAV 183

Query: 172 QLAKL-GNTHVTATCGARN-IELVKSLGADEVLDYKT--PDGAALKSPSGRKYDAVINCV 227
             A+L G   + A     N +EL K  GA +++DYK        LK   G+  DAVI   
Sbjct: 184 AGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAG 243

Query: 228 TGIPWSTFEPNL 239
            G    TFE  L
Sbjct: 244 GGQ--DTFEQAL 253

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 50.5 bits (121), Expect = 4e-07
 Identities = 48/241 (19%), Positives = 67/241 (27%), Gaps = 76/241 (31%)

Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85
           E+ V  P   E  +KV A  +   D  +  G L    P   P I   + AG V  +G  V
Sbjct: 17  EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKL----PTPLPVILGHEGAGIVESIGPGV 72

Query: 86  KNFKVGDKVVAV-----------LSGGG-------------------------------- 102
              K GDKV+ +           L+                                   
Sbjct: 73  TTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHF 132

Query: 103 -----LAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNI 157
                 AE+ V  E        +    +   I C   T + A   +  V         + 
Sbjct: 133 LGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVT------PGST 186

Query: 158 LITAASGAVGLYAVQLAKLGNTHVTATCGARNI----------ELVKSLGADEVLDYKTP 207
                 G VGL  +   K          GA  I          E  K LGA E ++ +  
Sbjct: 187 CAVFGLGGVGLSVIMGCKA--------AGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238

Query: 208 D 208
           D
Sbjct: 239 D 239

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 49.9 bits (120), Expect = 7e-07
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)

Query: 7  MHAVQYDSYGGGVAGLKHV---EVPVPT-PNKDEALLKVEAASINPIDWKLQKGMLRPFL 62
          M AV +        G   V   EVP+P   +  +A++KV AA+I   D  + +G + P  
Sbjct: 1  MKAVVFK-------GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHI-PST 52

Query: 63 PRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVA 96
          P    F+   +  GEV+ +G EV+  KVGD+VV+
Sbjct: 53 P---GFVLGHEFVGEVVEVGPEVRTLKVGDRVVS 83

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 55/263 (20%), Positives = 80/263 (30%), Gaps = 78/263 (29%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84
            EV +  P   E L+++ A  +   D     G      P  FP +   + AG V  +G  
Sbjct: 18  EEVDLDPPRAGEVLVRITATGVCHTDAHTLSG----DDPEGFPAVLGHEGAGIVEAVGEG 73

Query: 85  VKNFKVGDKVVAV-------------------------------------LSGGG----- 102
           V + K GD V+ +                                     LSG G     
Sbjct: 74  VTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYH 133

Query: 103 ------LAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKN 156
                  AE+ V  E   V    +    +   + C   T   A+  +  V+   +     
Sbjct: 134 YLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDT----- 188

Query: 157 ILITAASGAVGLYAVQLAKLGNTHVTATCGARNI----------ELVKSLGADEVLDYKT 206
            +     G VGL A+Q AK          GA  I          EL K  GA   ++ K 
Sbjct: 189 -VAVFGLGGVGLAAIQGAKAA--------GAGRIIAVDINPEKLELAKKFGATHFVNPKE 239

Query: 207 PDGA--ALKSPSGRKYDAVINCV 227
            D    A+   +    D    CV
Sbjct: 240 VDDVVEAIVELTDGGADYAFECV 262

Length = 366

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 74/296 (25%), Positives = 110/296 (37%), Gaps = 74/296 (25%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A+ Y  +G G    +    P      D A++K+   +I   D  + KG          
Sbjct: 1   MKALVY--HGPGKISWEDRPKPTIQEPTD-AIVKMLKTTICGTDLHILKG--------DV 49

Query: 67  PFIPASDVAG-EVIG----LGSEVKNFKVGDKV-VAVLS-----------------GGGL 103
           P +    + G E +G    +GS V NFKVGD+V ++ +S                  GG 
Sbjct: 50  PTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGW 109

Query: 104 ----------AEFA---VAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDG 150
                     AE+     A  SL    P+ V       +     T ++    +  VK   
Sbjct: 110 ILGNLIDGTQAEYVRIPHADNSL-YKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGD 168

Query: 151 SGQQKNILITAASGAVGLYAVQLAKL---GNTHVTATCGARNIELVKSLGADEVLDYKTP 207
           +     + I  A G VGL A+  A+L       +      R +E+ K LGA   ++    
Sbjct: 169 T-----VAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNR-LEVAKKLGATHTVNSAKG 221

Query: 208 DGA--ALKSPSGRKYDAVINCVTGIPWSTFE------------PNLGTTGKVIDFN 249
           D     L+   GR  D VI  V GIP +TFE             N+G  GK +D +
Sbjct: 222 DAIEQVLELTDGRGVDVVIEAV-GIP-ATFELCQELVAPGGHIANVGVHGKPVDLH 275

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 26/174 (14%)

Query: 55  KGMLRPF----LPRKFPFIPASDVAGEVIG--LGSEVKNFKVGDKVVAVLSGGGLAEFAV 108
           +G +R F    LP   PF+P   + G  +   + S+  NFK GD +  +    G  E+++
Sbjct: 60  RGRMRDFHDSYLP---PFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGIT---GWEEYSL 113

Query: 109 AKESLTVARP----QEVSAAEGAGI-PCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS 163
            + S    R      ++  +   G+   AG TA+    +    K     +  ++ ++AAS
Sbjct: 114 IRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPK-----KGDSVFVSAAS 168

Query: 164 GAVGLYAVQLAKLGNTHVTATCGA-RNIELVKS-LGADEVLDYK-TPD-GAALK 213
           GAVG    QLAKL   +V  + G+ + ++L+K+ LG DE  +YK  PD  AALK
Sbjct: 169 GAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALK 222

Length = 348

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 45.8 bits (108), Expect = 1e-05
 Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 10/105 (9%)

Query: 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187
           G+P  GLTA+  L +  GVK    G+   +++ AA+GAVG    Q+AKL    V    G+
Sbjct: 120 GMP--GLTAYFGLLEICGVK---GGE--TVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGS 172

Query: 188 -RNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTG 229
              +  +K LG D   +YKT       LK  S   YD   + V G
Sbjct: 173 DEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGG 217

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 39/203 (19%)

Query: 76  GEVIGLGSEVKNFKVGDKV-VA-----------VLSG----------------GGLAEFA 107
           G V  +G  V + KVGD+V +A             +G                GG+AE  
Sbjct: 63  GIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQC 122

Query: 108 VAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG 167
           +      V  P+ +  A+ + I CAG+T ++A+  S G+K    GQ   I I  A G +G
Sbjct: 123 IVTADYAVKVPEGLDPAQASSITCAGVTTYKAIKVS-GIK---PGQW--IAIYGA-GGLG 175

Query: 168 LYAVQLAK-LGNTHVTATCGARN-IELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAV 223
             A+Q AK + N  V A     + + L K +GAD  ++ K  +  A  ++  +G  + AV
Sbjct: 176 NLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAHAAV 235

Query: 224 INCVTGIPWSTFEPNLGTTGKVI 246
           +  V    ++     +   G+V+
Sbjct: 236 VTAVAKAAFNQAVDAVRAGGRVV 258

Length = 338

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 30/148 (20%)

Query: 76  GEVIGLGSEVKNFKVGDKV---------VAVLSGGGLAEFAVAKESLTVARPQEVSAAEG 126
           G V    S+ + F VGD V          AVL G  L +            PQ V     
Sbjct: 80  GVVEE--SKHQKFAVGDIVTSFNWPWQTYAVLDGSSLEK----------VDPQLVDGHLS 127

Query: 127 AGIPCAGLTAHQALTQSLGVKLDG---SGQQKNILITAASGAVGLYAVQLAKL-GNTHVT 182
             +   GL     LT  +G++  G    G  + ++++ A+GA G  A Q+ +L G + V 
Sbjct: 128 YFLGAVGLPG---LTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVV 184

Query: 183 ATCGA--RNIELVKSLGADEVLDYKTPD 208
             CG+  +   L   LG D  ++YKT +
Sbjct: 185 GICGSDEKCQLLKSELGFDAAINYKTDN 212

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 43.9 bits (104), Expect = 6e-05
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85
           E+ V  P  +E  +K+ A S+   D    +G    F    FP I   + AG V  +G  V
Sbjct: 19  EIEVAPPKANEVRIKMLATSVCHTDILAIEG----FKATLFPVILGHEGAGIVESVGEGV 74

Query: 86  KNFKVGDKVVAVLSG 100
            N K GDKV+ +  G
Sbjct: 75  TNLKPGDKVIPLFIG 89

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 65/260 (25%), Positives = 90/260 (34%), Gaps = 79/260 (30%)

Query: 32  PNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVG 91
           P  DE L+++ A  I   D  ++ G L   LP     +   + AG V  +GS V   K G
Sbjct: 25  PRPDEVLVRIVATGICHTDLVVRDGGLPTPLPA----VLGHEGAGVVEAVGSAVTGLKPG 80

Query: 92  DKVV-----------------------AVLSGGG-------------------------- 102
           D VV                         L+  G                          
Sbjct: 81  DHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSS 140

Query: 103 LAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAA 162
            A +AV  E   V   ++V     A + C   T   A+   L  +   S     I +  A
Sbjct: 141 FATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSS-----IAVFGA 195

Query: 163 SGAVGLYAVQLAKLGNTHVTATCGARNI----------ELVKSLGADEVLDYKTPD-GAA 211
            GAVGL AV  AK+         G   I          EL K LGA  V++ K  D  AA
Sbjct: 196 -GAVGLAAVMAAKI--------AGCTTIIAVDIVDSRLELAKELGATHVINPKEEDLVAA 246

Query: 212 LKSPSGRKYDAVINCVTGIP 231
           ++  +G   D  ++  TG+P
Sbjct: 247 IREITGGGVDYALDT-TGVP 265

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 68/352 (19%), Positives = 113/352 (32%), Gaps = 96/352 (27%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84
            ++P P P   EAL++V  A I   D ++ KG         FP +P  +  G V      
Sbjct: 15  EDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA 68

Query: 85  VKNFKVGDKVVA-----------VLSG-----------------GGLAEFAVAKESLTVA 116
                VG +VV               G                 G  AE+          
Sbjct: 69  E---LVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHV 125

Query: 117 RPQEVSAAEGAGI-PCAGLTAHQALTQSLGVKLDGSGQQKNILITAA-----SGAVGLYA 170
            P  V   +     P A   A + L            +Q  I           G +GL  
Sbjct: 126 VPDLVPDEQAVFAEPLAA--ALEIL------------EQVPITPGDKVAVLGDGKLGLLI 171

Query: 171 VQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229
            Q+  L    V      +  + L + LG     +   PD A      G  +D V+   TG
Sbjct: 172 AQVLALTGPDVVLVGRHSEKLALARRLGV----ETVLPDEA---ESEGGGFDVVVEA-TG 223

Query: 230 IPWSTFEPNLG------------TTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP 277
            P S  E  L             T      F+ +  V+      ++T    +  PF    
Sbjct: 224 SP-SGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVV-----NEITLVGSRCGPF---- 273

Query: 278 KGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
                   ++L+++G +    +I + + L +A +A+ ++ +     K+++ P
Sbjct: 274 -----APALRLLRKGLVDVDPLITAVYPLEEALEAFERA-AEPGALKVLLRP 319

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 62/247 (25%), Positives = 85/247 (34%), Gaps = 73/247 (29%)

Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85
           EV +  P   E L+K+ AA +   D  +  G  RP   R  P     + AG V+ +G  V
Sbjct: 25  EVELDPPGPGEVLVKIAAAGLCHSDLSVING-DRP---RPLPMALGHEAAGVVVEVGEGV 80

Query: 86  KNFKVGDKVVAV-------------------------------LSGG------------- 101
            + +VGD VV V                               LSGG             
Sbjct: 81  TDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHH 140

Query: 102 ----GLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVK---------L 148
                 AE+AV      V   ++V     A   CA LT   A+  + GV+         L
Sbjct: 141 LGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL 200

Query: 149 DGSGQQKNILITAASGAVGLYAV-------QLAK-LGNTHVTATCGARNIELVKSL---G 197
            G G    +L   A+GA  + AV        LA+ LG T          +E V+ L   G
Sbjct: 201 GGVGLSA-LLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGG 259

Query: 198 ADEVLDY 204
            D   + 
Sbjct: 260 VDYAFEM 266

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKG-----MLRPFLPRKFPFIPASDVAGEVIG 80
           +VPVP    DE L++V+A  I   D  L +      +L P L   FP +   + +G V  
Sbjct: 43  DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTE-FPVVIGHEFSGVVEK 101

Query: 81  LGSEVKNFKVGDKVVA 96
            G  VKNF+ GD V A
Sbjct: 102 TGKNVKNFEKGDPVTA 117

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 48/202 (23%), Positives = 75/202 (37%), Gaps = 45/202 (22%)

Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKV-VAVLSG----------------------- 100
           ++P IP  ++ G    +G  V  FK GD+V V V+ G                       
Sbjct: 59  RYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTY 118

Query: 101 -----------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLD 149
                      GG ++  V      ++ P  + +  GA + CAG+T +  +      K  
Sbjct: 119 NSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKES 178

Query: 150 GSGQQKNILITAASGAVGLYAVQLAKLGNTHVT--ATCGARNIELVKSLGADEVLDYKTP 207
           G     N L     G +G  AV++ K     VT  +    +  E +  LGAD  L   T 
Sbjct: 179 GKRLGVNGL-----GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFL--VTT 231

Query: 208 DGAALKSPSGRKYDAVINCVTG 229
           D   +K   G   D +I+ V+ 
Sbjct: 232 DSQKMKEAVG-TMDFIIDTVSA 252

Length = 375

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 15 YGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKL-QKGMLRPFLPR---KFPFIP 70
          YG G   L+  E+P      DE L++V + S+    WKL  +G     +P    K P I 
Sbjct: 9  YGKGDLRLEKFELP--EIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVIL 66

Query: 71 ASDVAGEVIGLGSEVKN-FKVGDKVV 95
            + AG ++ +G + +  +K G + V
Sbjct: 67 GHEFAGTILKVGKKWQGKYKPGQRFV 92

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 39.1 bits (92), Expect = 0.003
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 24/99 (24%)

Query: 7  MHAVQYDSYGGGVAGLKHVEVP-VPTP---NKDEALLKVEAASINPIDWKLQKGMLRPFL 62
          M A+ +        G   V V  VP P   +  +A+++V A +I   D  L  G +    
Sbjct: 1  MKALVWH-------GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYI---- 49

Query: 63 PRKFPFIPASDV-----AGEVIGLGSEVKNFKVGDKVVA 96
              P +   D+      G V  +G EV+N KVGD+VV 
Sbjct: 50 ----PGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVV 84

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 45/222 (20%), Positives = 78/222 (35%), Gaps = 35/222 (15%)

Query: 21  GLKHVEVPVPTPNKDEALLKVEAASINPIDWKL-QKGMLRPFLPRKFPFIPASDVAGEVI 79
            L+ V +  P+P   + ++++  + I+    KL   G++ PF    +P +P  +  G V+
Sbjct: 14  ELREVTLTPPSPG--DLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVV 71

Query: 80  GLGSEVKNFKVGDKV----------VAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGI 129
             G +   F+ GD+V          V  L GG           +    P      +GA +
Sbjct: 72  EAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDP--ALGPQGALL 128

Query: 130 PCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN 189
             A    H          + G+  +    +    G +G    +L K       A      
Sbjct: 129 ALAATARH---------AVAGAEVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNP 179

Query: 190 IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP 231
                + G  EVLD   P+         R Y A+ +  +G P
Sbjct: 180 RRRDGATG-YEVLD---PEKDP-----RRDYRAIYD-ASGDP 211

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	327
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	100.0
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	100.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.78
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.66
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.58
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.35
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.26
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.19
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.17
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.11
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.02
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.02
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.89
PLN02494	477	adenosylhomocysteinase	97.7
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.67
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.58
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.52
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.47
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.34
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.3
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.29
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.26
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.25
PRK08324	681	short chain dehydrogenase; Validated	97.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.0
PRK12742	237	oxidoreductase; Provisional	96.98
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	96.91
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.9
PRK05993	277	short chain dehydrogenase; Provisional	96.77
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.74
PRK12367	245	short chain dehydrogenase; Provisional	96.73
PRK05693	274	short chain dehydrogenase; Provisional	96.7
PRK08177	225	short chain dehydrogenase; Provisional	96.63
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.52
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.46
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.46
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.43
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.4
PRK06139	330	short chain dehydrogenase; Provisional	96.4
PRK06182	273	short chain dehydrogenase; Validated	96.37
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.32
PRK07060	245	short chain dehydrogenase; Provisional	96.29
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.28
PRK09291	257	short chain dehydrogenase; Provisional	96.25
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.25
PRK06057	255	short chain dehydrogenase; Provisional	96.24
PRK08017	256	oxidoreductase; Provisional	96.2
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.18
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.17
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	96.16
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.13
PLN03209	576	translocon at the inner envelope of chloroplast su	96.13
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.13
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	96.13
PRK07806	248	short chain dehydrogenase; Provisional	96.12
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	96.12
PRK06196	315	oxidoreductase; Provisional	96.1
PRK05872	296	short chain dehydrogenase; Provisional	96.1
PRK05866	293	short chain dehydrogenase; Provisional	96.09
PRK06949	258	short chain dehydrogenase; Provisional	96.08
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.05
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.0
KOG1252	362	consensus Cystathionine beta-synthase and related	95.99
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	95.94
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.93
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	95.88
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	95.88
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	95.87
PRK07904	253	short chain dehydrogenase; Provisional	95.83
PRK08339	263	short chain dehydrogenase; Provisional	95.8
PRK06953	222	short chain dehydrogenase; Provisional	95.78
PRK07814	263	short chain dehydrogenase; Provisional	95.77
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.72
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.72
PRK05867	253	short chain dehydrogenase; Provisional	95.72
PRK12829	264	short chain dehydrogenase; Provisional	95.69
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.65
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.64
PRK09072	263	short chain dehydrogenase; Provisional	95.63
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.62
PRK06180	277	short chain dehydrogenase; Provisional	95.6
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.6
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.6
PRK07326	237	short chain dehydrogenase; Provisional	95.59
PRK07831	262	short chain dehydrogenase; Provisional	95.58
PRK06841	255	short chain dehydrogenase; Provisional	95.58
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.57
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.57
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.56
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.55
PRK07825	273	short chain dehydrogenase; Provisional	95.52
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	95.51
PRK06179	270	short chain dehydrogenase; Provisional	95.5
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.46
PRK06483	236	dihydromonapterin reductase; Provisional	95.43
PRK06194	287	hypothetical protein; Provisional	95.41
PRK12828	239	short chain dehydrogenase; Provisional	95.39
PRK08265	261	short chain dehydrogenase; Provisional	95.36
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.35
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.35
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.33
PRK06500	249	short chain dehydrogenase; Provisional	95.33
PRK06523	260	short chain dehydrogenase; Provisional	95.32
PRK07109	334	short chain dehydrogenase; Provisional	95.32
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.31
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.31
PRK07478	254	short chain dehydrogenase; Provisional	95.29
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.28
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.28
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.26
PRK07677	252	short chain dehydrogenase; Provisional	95.26
PRK08862	227	short chain dehydrogenase; Provisional	95.24
PRK07063	260	short chain dehydrogenase; Provisional	95.24
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.24
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	95.22
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.22
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.2
PLN02253	280	xanthoxin dehydrogenase	95.17
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.16
PRK08628	258	short chain dehydrogenase; Provisional	95.15
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.14
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	95.14
PRK07577	234	short chain dehydrogenase; Provisional	95.14
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	95.12
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	95.08
CHL00194	317	ycf39 Ycf39; Provisional	95.05
PRK08267	260	short chain dehydrogenase; Provisional	95.03
PRK04148	134	hypothetical protein; Provisional	95.03
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.01
PRK08264	238	short chain dehydrogenase; Validated	95.01
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.96
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	94.95
PRK06138	252	short chain dehydrogenase; Provisional	94.95
PRK06197	306	short chain dehydrogenase; Provisional	94.94
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	94.92
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.9
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	94.88
PRK12939	250	short chain dehydrogenase; Provisional	94.88
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.87
PRK08278	273	short chain dehydrogenase; Provisional	94.86
PRK05717	255	oxidoreductase; Validated	94.83
COG4122	219	Predicted O-methyltransferase [General function pr	94.83
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.81
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.8
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.79
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	94.78
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.77
PRK07023	243	short chain dehydrogenase; Provisional	94.76
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.75
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	94.73
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.69
PRK07454	241	short chain dehydrogenase; Provisional	94.68
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	94.67
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	94.66
PRK06484	520	short chain dehydrogenase; Validated	94.64
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.64
PRK06198	260	short chain dehydrogenase; Provisional	94.63
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	94.63
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	94.63
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	94.62
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.57
PRK05875	276	short chain dehydrogenase; Provisional	94.57
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.57
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	94.55
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.54
PRK06720	169	hypothetical protein; Provisional	94.51
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.5
PRK12938	246	acetyacetyl-CoA reductase; Provisional	94.49
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	94.49
PRK00536	262	speE spermidine synthase; Provisional	94.48
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.48
PRK07067	257	sorbitol dehydrogenase; Provisional	94.47
PRK05884	223	short chain dehydrogenase; Provisional	94.41
PRK06482	276	short chain dehydrogenase; Provisional	94.37
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	94.29
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.28
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	94.28
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	94.24
PRK08263	275	short chain dehydrogenase; Provisional	94.23
PRK07832	272	short chain dehydrogenase; Provisional	94.23
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.22
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.22
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.19
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.18
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.11
PLN02653	340	GDP-mannose 4,6-dehydratase	94.1
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.06
PRK07074	257	short chain dehydrogenase; Provisional	94.05
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.04
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	94.02
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.02
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	93.98
PRK06484	520	short chain dehydrogenase; Validated	93.97
PRK05854	313	short chain dehydrogenase; Provisional	93.95
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	93.95
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	93.94
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	93.93
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	93.92
PRK07097	265	gluconate 5-dehydrogenase; Provisional	93.92
PRK06701	290	short chain dehydrogenase; Provisional	93.89
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	93.88
PRK05650	270	short chain dehydrogenase; Provisional	93.87
PRK10538	248	malonic semialdehyde reductase; Provisional	93.86
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.83
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.83
PRK08589	272	short chain dehydrogenase; Validated	93.82
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	93.81
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	93.8
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	93.79
PLN02780	320	ketoreductase/ oxidoreductase	93.79
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	93.77
PRK07062	265	short chain dehydrogenase; Provisional	93.75
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	93.71
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.69
PRK13243	333	glyoxylate reductase; Reviewed	93.66
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	93.65
PRK06398	258	aldose dehydrogenase; Validated	93.65
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	93.62
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	93.59
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.57
PRK08219	227	short chain dehydrogenase; Provisional	93.56
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	93.56
PRK07985	294	oxidoreductase; Provisional	93.55
PRK09186	256	flagellin modification protein A; Provisional	93.55
PRK07576	264	short chain dehydrogenase; Provisional	93.54
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	93.53
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	93.53
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	93.51
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.39
PRK07523	255	gluconate 5-dehydrogenase; Provisional	93.36
TIGR00438	188	rrmJ cell division protein FtsJ.	93.34
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.29
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	93.29
PRK07035	252	short chain dehydrogenase; Provisional	93.28
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	93.28
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.28
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	93.27
PRK08213	259	gluconate 5-dehydrogenase; Provisional	93.24
PLN02695	370	GDP-D-mannose-3',5'-epimerase	93.23
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.18
PRK12746	254	short chain dehydrogenase; Provisional	93.16
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	93.15
KOG0725	270	consensus Reductases with broad range of substrate	93.11
PRK08703	239	short chain dehydrogenase; Provisional	93.1
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	93.1
PRK01581	374	speE spermidine synthase; Validated	93.07
PRK07856	252	short chain dehydrogenase; Provisional	93.07
PLN00016	378	RNA-binding protein; Provisional	93.07
PRK06172	253	short chain dehydrogenase; Provisional	93.05
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.05
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.03
PRK07574	385	formate dehydrogenase; Provisional	92.99
PRK07890	258	short chain dehydrogenase; Provisional	92.94
PRK06101	240	short chain dehydrogenase; Provisional	92.93
PRK06487	317	glycerate dehydrogenase; Provisional	92.93
PRK08226	263	short chain dehydrogenase; Provisional	92.93
PLN02928	347	oxidoreductase family protein	92.92
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.91
PRK08303	305	short chain dehydrogenase; Provisional	92.9
PLN02214	342	cinnamoyl-CoA reductase	92.89
PRK06128	300	oxidoreductase; Provisional	92.88
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.88
PRK06125	259	short chain dehydrogenase; Provisional	92.87
PLN02896	353	cinnamyl-alcohol dehydrogenase	92.87
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.86
PRK06114	254	short chain dehydrogenase; Provisional	92.85
PRK05876	275	short chain dehydrogenase; Provisional	92.84
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	92.84
PLN02366	308	spermidine synthase	92.8
PRK08655	437	prephenate dehydrogenase; Provisional	92.79
PRK14967	223	putative methyltransferase; Provisional	92.77
PRK08317	241	hypothetical protein; Provisional	92.76
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.74
PRK11207	197	tellurite resistance protein TehB; Provisional	92.73
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	92.69
PRK08643	256	acetoin reductase; Validated	92.68
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.67
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	92.64
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	92.64
PRK08085	254	gluconate 5-dehydrogenase; Provisional	92.63
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.62
PRK09242	257	tropinone reductase; Provisional	92.57
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	92.57
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	92.54
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	92.54
PRK10637	457	cysG siroheme synthase; Provisional	92.53
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	92.52
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	92.47
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	92.47
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	92.45
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	92.43
PRK00811	283	spermidine synthase; Provisional	92.42
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	92.39
PRK12743	256	oxidoreductase; Provisional	92.36
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.32
PRK06914	280	short chain dehydrogenase; Provisional	92.25
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	92.25
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	92.25
PRK07024	257	short chain dehydrogenase; Provisional	92.24
PLN00198	338	anthocyanidin reductase; Provisional	92.23
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	92.22
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.2
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	92.19
PLN03139	386	formate dehydrogenase; Provisional	92.18
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	92.17
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	92.14
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	92.12
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	92.12
PRK06181	263	short chain dehydrogenase; Provisional	92.11
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	92.09
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	92.09
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.08
PLN02240	352	UDP-glucose 4-epimerase	92.08
PRK07402	196	precorrin-6B methylase; Provisional	92.03
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	92.01
KOG1208	314	consensus Dehydrogenases with different specificit	92.01
PRK07774	250	short chain dehydrogenase; Provisional	92.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	92.0
PRK05855	582	short chain dehydrogenase; Validated	91.98
COG0569	225	TrkA K+ transport systems, NAD-binding component [	91.96
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	91.96
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	91.94
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	91.91
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	91.83
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	91.82
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	91.79
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.77
PLN03075	296	nicotianamine synthase; Provisional	91.76
PRK06124	256	gluconate 5-dehydrogenase; Provisional	91.74
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	91.72
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.66
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	91.64
PRK08251	248	short chain dehydrogenase; Provisional	91.62
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	91.61
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	91.61
PRK09135	249	pteridine reductase; Provisional	91.56
PRK12548	289	shikimate 5-dehydrogenase; Provisional	91.55
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	91.55
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	91.55
PRK07201	657	short chain dehydrogenase; Provisional	91.54
PRK07578	199	short chain dehydrogenase; Provisional	91.53
PLN02166	436	dTDP-glucose 4,6-dehydratase	91.5
PLN02583	297	cinnamoyl-CoA reductase	91.45
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	91.45
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	91.45
PRK12747	252	short chain dehydrogenase; Provisional	91.44
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	91.43
PRK14982	340	acyl-ACP reductase; Provisional	91.42
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	91.42
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	91.4
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	91.39
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	91.39
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	91.38
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.36
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	91.27
PLN02427	386	UDP-apiose/xylose synthase	91.26
smart00846	149	Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase,	91.24
PRK10258	251	biotin biosynthesis protein BioC; Provisional	91.24
PRK07102	243	short chain dehydrogenase; Provisional	91.22
PLN02476	278	O-methyltransferase	91.21
PRK07791	286	short chain dehydrogenase; Provisional	91.17
PRK06924	251	short chain dehydrogenase; Provisional	91.17
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	91.12
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	91.09
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.07
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	91.02
PRK12937	245	short chain dehydrogenase; Provisional	90.96
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	90.95
PRK11579	346	putative oxidoreductase; Provisional	90.95
PRK12935	247	acetoacetyl-CoA reductase; Provisional	90.91
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.87
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	90.82
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	90.8
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	90.77
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	90.75
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	90.74

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=3.5e-59  Score=397.25  Aligned_cols=306  Identities=29%  Similarity=0.428  Sum_probs=275.7

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      +++|||+++.+++++   +++++.+.|+|.++||+|+|+++|+|++|+|.++|.++..   .+|.+||||.+|+|+++|+
T Consensus         1 ~~~mkA~~~~~~~~p---l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~---~~P~ipGHEivG~V~~vG~   74 (339)
T COG1064           1 MMTMKAAVLKKFGQP---LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP---KLPLIPGHEIVGTVVEVGE   74 (339)
T ss_pred             CcceEEEEEccCCCC---ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC---CCCccCCcceEEEEEEecC
Confidence            578999999999987   9999999999999999999999999999999999998742   5899999999999999999


Q ss_pred             CCCCCCCCCEEEE-Ec---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHH
Q 020314           84 EVKNFKVGDKVVA-VL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLT  135 (327)
Q Consensus        84 ~~~~~~~Gd~V~~-~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t  135 (327)
                      +|+.|++||||.. +.                           .+|+|+||+++++.+++++|+++++++||.+.|++.|
T Consensus        75 ~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT  154 (339)
T COG1064          75 GVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGIT  154 (339)
T ss_pred             CCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeee
Confidence            9999999999977 33                           7899999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC-ccccc
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD-GAALK  213 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~-~~~~~  213 (327)
                      .|++|+ ..++     ++|++|+|+| .|++|.+++|+|+++|++|++++++ +|++.+++||++.+++.++.+ .+..+
T Consensus       155 ~y~alk-~~~~-----~pG~~V~I~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~  227 (339)
T COG1064         155 TYRALK-KANV-----KPGKWVAVVG-AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVK  227 (339)
T ss_pred             Eeeehh-hcCC-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhH
Confidence            999994 5777     9999999999 6799999999999999999999955 789999999999999977433 22222


Q ss_pred             CCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc-hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC
Q 020314          214 SPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG  292 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  292 (327)
                      .    .+|+++|+++...++.+++.|+++|+++.+|... .....++...+.++++.+.+ +....+.++++++++.++|
T Consensus       228 ~----~~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~G-S~~g~~~d~~e~l~f~~~g  302 (339)
T COG1064         228 E----IADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVG-SLVGTRADLEEALDFAAEG  302 (339)
T ss_pred             h----hCcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEE-EecCCHHHHHHHHHHHHhC
Confidence            1    2999999999555999999999999999999874 55455667778889999998 6667899999999999999


Q ss_pred             ceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          293 KLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       293 ~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++.+.+.++++++++|++.|++++..||.||++
T Consensus       303 ~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         303 KIKPEILETIPLDEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             CceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence            99999878999999999999999999999999864

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=8.8e-55  Score=379.68  Aligned_cols=313  Identities=36%  Similarity=0.545  Sum_probs=270.2

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||++++.+++.+ +.+++++.+.|.|.++||+|||.++|+|+.|.+.+.|..++  ...+|.++|.|++|+|+++|++++
T Consensus         1 mka~~~~~~g~~-~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~--~~~~P~i~G~d~aG~V~avG~~V~   77 (326)
T COG0604           1 MKAVVVEEFGGP-EVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPP--VRPLPFIPGSEAAGVVVAVGSGVT   77 (326)
T ss_pred             CeEEEEeccCCC-ceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCC--CCCCCCcccceeEEEEEEeCCCCC
Confidence            799999999984 44999999999999999999999999999999999997321  236899999999999999999999


Q ss_pred             CCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCC
Q 020314           87 NFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS  163 (327)
Q Consensus        87 ~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~  163 (327)
                      .+++||||+...   .+|+|+||..+|++.++++|+++|+++||+++..++|||+++.+..++     ++|++|||+||+
T Consensus        78 ~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l-----~~g~~VLV~gaa  152 (326)
T COG0604          78 GFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGL-----KPGETVLVHGAA  152 (326)
T ss_pred             CcCCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCEEEEecCC
Confidence            999999999986   689999999999999999999999999999999999999999988888     889999999999


Q ss_pred             ChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccC
Q 020314          164 GAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLG  240 (327)
Q Consensus       164 g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~  240 (327)
                      |++|.+++|+|+++|+++++++ ++++.++++++|+++++++.+.+  ..+.+.++++++|+|||++|++.+..++++|+
T Consensus       153 GgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~  232 (326)
T COG0604         153 GGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALA  232 (326)
T ss_pred             chHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhc
Confidence            9999999999999997666655 56777799999999999998876  34556788889999999999999999999999


Q ss_pred             CCcEEEeecCCc-hhHHHHhhhhccccceeeEEEEeCCC-----HHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314          241 TTGKVIDFNPSP-RVLLTFAWKKLTFSKKQLVPFSVSPK-----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS  314 (327)
Q Consensus       241 ~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~  314 (327)
                      ++|+++.+|... .....+....+..+.+...+.+....     .+.++++.+++++|.+++.+..+|++++..++....
T Consensus       233 ~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~  312 (326)
T COG0604         233 PGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHL  312 (326)
T ss_pred             cCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHH
Confidence            999999999876 33333444455555666666544434     567888999999999999999999999955555444


Q ss_pred             hc-CCCCccEEEeC
Q 020314          315 IS-GRATGKIIVEP  327 (327)
Q Consensus       315 ~~-~~~~gkvvv~~  327 (327)
                      .. ++..||+|+++
T Consensus       313 ~~~~~~~GKvvl~~  326 (326)
T COG0604         313 LLERRTTGKVVLKV  326 (326)
T ss_pred             HcccCCcceEEEeC
Confidence            43 58889999975

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=2.7e-53  Score=337.45  Aligned_cols=317  Identities=30%  Similarity=0.426  Sum_probs=284.3

Q ss_pred             CCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314            2 AGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         2 ~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      ++|+..|.++++++|. .+.+++++.+.|+|+|+|.+||..++|+|..|...+.|.+.   +...|.+||.|.+|+|+++
T Consensus         4 ~~p~~~k~i~v~e~Gg-ydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAv   79 (336)
T KOG1197|consen    4 ASPPLLKCIVVTEFGG-YDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAV   79 (336)
T ss_pred             CCCchheEEEEeccCC-cceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEe
Confidence            4789999999999996 79999999999999999999999999999999999999984   3478999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314           82 GSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      |++++++++||||+.....|.|+++..+|...++++|+.+++.+||++...++|||..+.+..++     ++|++||||.
T Consensus        80 G~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~v-----kpGhtVlvha  154 (336)
T KOG1197|consen   80 GEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNV-----KPGHTVLVHA  154 (336)
T ss_pred             cCCccccccccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCEEEEEe
Confidence            99999999999999988999999999999999999999999999999999999999999999999     9999999999


Q ss_pred             CCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccc
Q 020314          162 ASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPN  238 (327)
Q Consensus       162 ~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  238 (327)
                      |+|++|++++|+++..|++++++++ .+|++.+++.|+++.|+++.++  ..+.+.++++|+|+++|++|.+.+..++.+
T Consensus       155 AAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~  234 (336)
T KOG1197|consen  155 AAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAA  234 (336)
T ss_pred             ccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHH
Confidence            9999999999999999999999885 4899999999999999999888  456677899999999999999999999999


Q ss_pred             cCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe---CCCHHH----HHHHHHHHHCCceeEecceeeccccHHHHH
Q 020314          239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV---SPKGEN----LDFLVKLVKEGKLKTVIDSKHSLSKAEDAW  311 (327)
Q Consensus       239 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~  311 (327)
                      |++.|.+|++|..++...++.+..++-+.+.+..-+.   ...+..    ..+++.++.+|.|++.|.++||++++.+|+
T Consensus       235 Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~  314 (336)
T KOG1197|consen  235 LKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAH  314 (336)
T ss_pred             hccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHH
Confidence            9999999999988776555555555555544332221   122333    357888999999999999999999999999


Q ss_pred             HHHhcCCCCccEEEeC
Q 020314          312 AKSISGRATGKIIVEP  327 (327)
Q Consensus       312 ~~~~~~~~~gkvvv~~  327 (327)
                      .++++++..||+++.+
T Consensus       315 ~diesrktvGkvlLlp  330 (336)
T KOG1197|consen  315 ADIESRKTVGKVLLLP  330 (336)
T ss_pred             HHHHhhhccceEEEeC
Confidence            9999999999999854

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.7e-51  Score=336.10  Aligned_cols=312  Identities=26%  Similarity=0.384  Sum_probs=267.7

Q ss_pred             CCCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEe
Q 020314            1 MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG   80 (327)
Q Consensus         1 m~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   80 (327)
                      |++|.++++|.+..++. ...+++.+++.|++.++||+|++++||||++|+|.+.|.++.   ..+|.++|||.+|+|++
T Consensus         4 ~~~p~k~~g~~~~~~~G-~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~---s~~PlV~GHEiaG~Vvk   79 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSG-VLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL---SKYPLVPGHEIAGVVVK   79 (360)
T ss_pred             ccCchhhEEEEEECCCC-CCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc---ccCCccCCceeeEEEEE
Confidence            45899999999999876 455777999999999999999999999999999999999864   37899999999999999


Q ss_pred             cCCCCCCCCCCCEEEEEc-----------------------------------cCcccceeEeecCCceeeCCCCCChhh
Q 020314           81 LGSEVKNFKVGDKVVAVL-----------------------------------SGGGLAEFAVAKESLTVARPQEVSAAE  125 (327)
Q Consensus        81 vG~~~~~~~~Gd~V~~~~-----------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~  125 (327)
                      +|++|+.|++||||-.-.                                   .+|+|++|+++++.++++||++++.++
T Consensus        80 vGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~  159 (360)
T KOG0023|consen   80 VGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLAS  159 (360)
T ss_pred             ECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhh
Confidence            999999999999983322                                   667799999999999999999999999


Q ss_pred             hcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHHHHHhcCCCEEEe
Q 020314          126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIELVKSLGADEVLD  203 (327)
Q Consensus       126 aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~~~~~lg~~~v~~  203 (327)
                      ||.+.|++.|+|.+| ...++     ++|+++-|.| .|++|.+++|+||++|++|++++++  +|.+..+.||++..++
T Consensus       160 aAPlLCaGITvYspL-k~~g~-----~pG~~vgI~G-lGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~  232 (360)
T KOG0023|consen  160 AAPLLCAGITVYSPL-KRSGL-----GPGKWVGIVG-LGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVD  232 (360)
T ss_pred             ccchhhcceEEeehh-HHcCC-----CCCcEEEEec-CcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEE
Confidence            999999999999999 56677     8999999999 5669999999999999999999965  4566778899998888


Q ss_pred             CC-CCC-cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHH
Q 020314          204 YK-TPD-GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGEN  281 (327)
Q Consensus       204 ~~-~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (327)
                      .. +.+ .+....+-+.++|-+.+. ...++..++++++++|++|++|.+.. ...+....+.++++.+.+ +.-..+.+
T Consensus       233 ~~~d~d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~G-S~vG~~ke  309 (360)
T KOG0023|consen  233 STEDPDIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKG-SIVGSRKE  309 (360)
T ss_pred             ecCCHHHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEe-eccccHHH
Confidence            77 444 222222323345555544 34458999999999999999998876 566667777888888888 66678899


Q ss_pred             HHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          282 LDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       282 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .++++++.+++.+++.+. ..+++++++|+++|++++..+|.|+++
T Consensus       310 t~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~  354 (360)
T KOG0023|consen  310 TQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDV  354 (360)
T ss_pred             HHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEc
Confidence            999999999999998885 899999999999999999999999864

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.1e-50  Score=330.80  Aligned_cols=308  Identities=23%  Similarity=0.269  Sum_probs=262.5

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      .+|+|+++.+.++    +++++.+.|++ .|+||+|++.++|||++|+|.+........--+.|+++|||.+|+|.++|+
T Consensus         3 ~~~~A~vl~g~~d----i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~   78 (354)
T KOG0024|consen    3 ADNLALVLRGKGD----IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGD   78 (354)
T ss_pred             cccceeEEEccCc----eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcc
Confidence            4689999988776    99999999986 999999999999999999998876543211125799999999999999999


Q ss_pred             CCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHH
Q 020314           84 EVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLT  135 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t  135 (327)
                      .|+++++||||+.-+                            .+|++++|++.+++.++++|+++|++++|++.. +++
T Consensus        79 ~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~eP-LsV  157 (354)
T KOG0024|consen   79 EVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEP-LSV  157 (354)
T ss_pred             cccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccc-hhh
Confidence            999999999997755                            679999999999999999999999999998875 789


Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHHhcCCCEEEeCCCCC-c---
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVKSLGADEVLDYKTPD-G---  209 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~-~---  209 (327)
                      +|||. +++++     ++|.+|||+| +|++|+.+...||++|+ +|+.++ .+.|++.++++|++.+.+....+ .   
T Consensus       158 ~~HAc-r~~~v-----k~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~  230 (354)
T KOG0024|consen  158 GVHAC-RRAGV-----KKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQEL  230 (354)
T ss_pred             hhhhh-hhcCc-----ccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHH
Confidence            99999 78888     9999999999 79999999999999999 777776 67899999999999887665533 1   


Q ss_pred             -cccc-CCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHH
Q 020314          210 -AALK-SPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLV  286 (327)
Q Consensus       210 -~~~~-~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (327)
                       +..+ ..+...+|+.|||+|.+. ++.++..++.+|.++.+|+.... ..++...+..+++++.+. ..+....|..++
T Consensus       231 ~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~-~~fpi~~v~~kE~~~~g~-fry~~~~y~~ai  308 (354)
T KOG0024|consen  231 AELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEE-IQFPIIDVALKEVDLRGS-FRYCNGDYPTAI  308 (354)
T ss_pred             HHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCc-cccChhhhhhheeeeeee-eeeccccHHHHH
Confidence             2222 233356999999999766 99999999999999988876543 566777888999999994 445667899999


Q ss_pred             HHHHCCcee--EecceeeccccHHHHHHHHhcCCCC-ccEEEe
Q 020314          287 KLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRAT-GKIIVE  326 (327)
Q Consensus       287 ~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~-gkvvv~  326 (327)
                      +++++|+++  +++++.|+++++.+||+.+.+++.. -|+++.
T Consensus       309 ~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  309 ELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIIT  351 (354)
T ss_pred             HHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEe
Confidence            999999964  6999999999999999999988853 377764

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=1.8e-49  Score=330.49  Aligned_cols=308  Identities=20%  Similarity=0.241  Sum_probs=265.9

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      |++||.++.++++|   |+++++++++|+++||+||+.++|+|++|.+.++|..|    ..||.++|||.+|+|++||++
T Consensus         1 mk~~aAV~~~~~~P---l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p----~~~P~vLGHEgAGiVe~VG~g   73 (366)
T COG1062           1 MKTRAAVAREAGKP---LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP----EGFPAVLGHEGAGIVEAVGEG   73 (366)
T ss_pred             CCceEeeeecCCCC---eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCceecccccccEEEEecCC
Confidence            57899999999998   99999999999999999999999999999999999985    469999999999999999999


Q ss_pred             CCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCceee
Q 020314           85 VKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLTVA  116 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~~~  116 (327)
                      |+++++||+|+...                                                ..++|++|.++++.++++
T Consensus        74 Vt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vk  153 (366)
T COG1062          74 VTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVK  153 (366)
T ss_pred             ccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEE
Confidence            99999999998765                                                335999999999999999


Q ss_pred             CCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHH
Q 020314          117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVK  194 (327)
Q Consensus       117 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~  194 (327)
                      ++++.+++.++++.|..+|.+.+..+.+++     ++|++|.|+| .|++|++++|-|+..|+ ++++++ +++|+++++
T Consensus       154 i~~~~p~~~a~llGCgV~TG~Gav~nta~v-----~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~  227 (366)
T COG1062         154 IDPDAPLEKACLLGCGVTTGIGAVVNTAKV-----EPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK  227 (366)
T ss_pred             CCCCCCccceEEEeeeeccChHHhhhcccC-----CCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH
Confidence            999999999999999999999999899999     9999999999 89999999999999999 888888 678999999


Q ss_pred             hcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc-hhHHHHhhhhccccceee
Q 020314          195 SLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKLTFSKKQL  270 (327)
Q Consensus       195 ~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~  270 (327)
                      ++|+++++|..+..  .+.+....++|+|.+|||+|+.. ++++++++.++|+.+.+|... +...+.....+... ..+
T Consensus       228 ~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~  306 (366)
T COG1062         228 KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVW  306 (366)
T ss_pred             hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceE
Confidence            99999999988763  22333333459999999999766 999999999999999998442 22222333333333 667


Q ss_pred             EEEEeC--CCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          271 VPFSVS--PKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       271 ~~~~~~--~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++....  ..+.++..++++..+|+|+  .++++.++|+|++|||+.|.+|+.. |-||.+
T Consensus       307 ~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~~  366 (366)
T COG1062         307 KGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIRF  366 (366)
T ss_pred             EEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEecC
Confidence            775442  3467899999999999975  6999999999999999999999987 666643

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.9e-47  Score=343.22  Aligned_cols=308  Identities=22%  Similarity=0.294  Sum_probs=259.8

Q ss_pred             eEEEEEeccCCC-----ccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314            7 MHAVQYDSYGGG-----VAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         7 ~~a~~~~~~g~~-----~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      |||+++.++|.+     ++.+++++.+.|+|.++||+||+.++|||++|++.+.|.++    ..+|.++|||++|+|+++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~GhE~~G~V~~v   76 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP----RPLPMALGHEAAGVVVEV   76 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC----CCCCccCCccceeEEEEe
Confidence            799999998863     57899999999999999999999999999999999988753    356899999999999999


Q ss_pred             CCCCCCCCCCCEEEEEcc------------------------------------------------CcccceeEeecCCc
Q 020314           82 GSEVKNFKVGDKVVAVLS------------------------------------------------GGGLAEFAVAKESL  113 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~~------------------------------------------------~g~~a~~~~~~~~~  113 (327)
                      |++++++++||||++...                                                .|+|+||+.++++.
T Consensus        77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~  156 (371)
T cd08281          77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS  156 (371)
T ss_pred             CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence            999999999999986320                                                26899999999999


Q ss_pred             eeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHH
Q 020314          114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIE  191 (327)
Q Consensus       114 ~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~  191 (327)
                      ++++|+++++++|+.+++++.|||+++.+..++     +++++|||.| +|++|++++|+|+..|+ +|+++++ ++|++
T Consensus       157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i-----~~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~  230 (371)
T cd08281         157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGV-----RPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLA  230 (371)
T ss_pred             eEECCCCCChHHhhhhcchHHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence            999999999999999999999999998777777     8999999998 69999999999999999 6888874 57889


Q ss_pred             HHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCch-hHHHHhhhhccccc
Q 020314          192 LVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPR-VLLTFAWKKLTFSK  267 (327)
Q Consensus       192 ~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~  267 (327)
                      +++++|++.++++.+.+  ..+.+.+.+ ++|++|||+|.. .+..++++++++|+++.+|.... ....+....+..++
T Consensus       231 ~a~~~Ga~~~i~~~~~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  309 (371)
T cd08281         231 LARELGATATVNAGDPNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEE  309 (371)
T ss_pred             HHHHcCCceEeCCCchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcC
Confidence            99999999999876654  223333444 799999999965 58899999999999999986532 22233444566778


Q ss_pred             eeeEEEEeC--CCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          268 KQLVPFSVS--PKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       268 ~~~~~~~~~--~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      +++.+.+..  ...++++++++++++|+++.  +++++|+++|+++||+.+.+++..||+|+
T Consensus       310 ~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         310 RTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             CEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            888875432  23567899999999999864  67889999999999999999998888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=2.1e-46  Score=334.98  Aligned_cols=307  Identities=21%  Similarity=0.275  Sum_probs=257.7

Q ss_pred             ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      ||||+++.+++++   +++++.+.|++.++||+|||.++|+|++|++...|..+    ..+|.++|||++|+|+++|+++
T Consensus         1 ~mka~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v   73 (358)
T TIGR03451         1 TVRGVIARSKGAP---VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGV   73 (358)
T ss_pred             CcEEEEEccCCCC---CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCC
Confidence            6999999998875   88899999999999999999999999999999988753    2578899999999999999999


Q ss_pred             CCCCCCCEEEEEc----------------------------------------cCcccceeEeecCCceeeCCCCCChhh
Q 020314           86 KNFKVGDKVVAVL----------------------------------------SGGGLAEFAVAKESLTVARPQEVSAAE  125 (327)
Q Consensus        86 ~~~~~Gd~V~~~~----------------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~  125 (327)
                      +++++||||++..                                        ..|+|+||+.+++..++++|+++++++
T Consensus        74 ~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~  153 (358)
T TIGR03451        74 TDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAA  153 (358)
T ss_pred             cccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhH
Confidence            9999999998621                                        248999999999999999999999999


Q ss_pred             hcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEe
Q 020314          126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLD  203 (327)
Q Consensus       126 aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~  203 (327)
                      ++.+++++.++|+++.+..++     +++++|||+| +|++|++++|+|+..|+ +|+++++ ++|++.++++|++.+++
T Consensus       154 aa~l~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~  227 (358)
T TIGR03451       154 AGLLGCGVMAGLGAAVNTGGV-----KRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVN  227 (358)
T ss_pred             hhhhcccchhhHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence            999999999999988777777     8999999998 69999999999999999 4888874 57888999999999998


Q ss_pred             CCCCC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchh-HHHHhhhhccccceeeEEEEe--CC
Q 020314          204 YKTPD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRV-LLTFAWKKLTFSKKQLVPFSV--SP  277 (327)
Q Consensus       204 ~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~  277 (327)
                      +.+.+  ..+.+.+.+.++|++|||+|++ .+..++++++++|+++.+|..... ...+....+..++.++.+.+.  ..
T Consensus       228 ~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  307 (358)
T TIGR03451       228 SSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL  307 (358)
T ss_pred             CCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence            87654  2344455667899999999975 588899999999999999865321 122333344556666766432  12


Q ss_pred             CHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          278 KGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       278 ~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      ..+.++++++++++|++++  +++++|+++|+++||+.+++++.. |++++
T Consensus       308 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       308 PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            4678899999999999864  678999999999999999988776 77765

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=5.4e-46  Score=330.37  Aligned_cols=305  Identities=26%  Similarity=0.372  Sum_probs=254.1

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.+++    .+++++.+.|++.++||+||+.++|+|++|++.+.+.+..  +..+|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~   74 (339)
T cd08239           1 MRGAVFPGDR----TVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVT   74 (339)
T ss_pred             CeEEEEecCC----ceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCc
Confidence            7999998644    4999999999999999999999999999999988776432  124578999999999999999999


Q ss_pred             CCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           87 NFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        87 ~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      .+++||||+..+                            .+|+|++|+.++...++++|+++++++++.+++++.|||+
T Consensus        75 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  154 (339)
T cd08239          75 HFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH  154 (339)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence            999999998743                            2589999999999999999999999999999999999999


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCCc-ccccCC
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKTPDG-AALKSP  215 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~  215 (327)
                      ++ ...++     ++|++|||+| +|++|++++|+|+++|++ |+++++ ++|++.++++|++.++++++.+. .+.+.+
T Consensus       155 ~l-~~~~~-----~~g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~  227 (339)
T cd08239         155 AL-RRVGV-----SGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELT  227 (339)
T ss_pred             HH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHh
Confidence            99 45666     7899999998 599999999999999997 888874 47888899999999998765432 233345


Q ss_pred             CCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314          216 SGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL  294 (327)
Q Consensus       216 ~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  294 (327)
                      .++++|++|||+|++. +..++++++++|+++.+|........ ....+..+++++.+. .....++++++++++++|++
T Consensus       228 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~g~-~~~~~~~~~~~~~~~~~g~i  305 (339)
T cd08239         228 SGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIE-VSNDLIRKQRTLIGS-WYFSVPDMEECAEFLARHKL  305 (339)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccC-cHHHHHhCCCEEEEE-ecCCHHHHHHHHHHHHcCCC
Confidence            5568999999999876 57889999999999999865432111 123445677777774 33456789999999999998


Q ss_pred             e--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          295 K--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       295 ~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +  ++++++|+++++++||+.+++++ .||+|+++
T Consensus       306 ~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         306 EVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             ChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            6  47888999999999999998875 69999864

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=8e-46  Score=330.71  Aligned_cols=307  Identities=18%  Similarity=0.256  Sum_probs=250.5

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .|+++++|.+.+..+   .+++.+.+.|.+.++||+|||.++|||++|++.+.|.++.   ..+|.++|||++|+|+++|
T Consensus         9 ~~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG   82 (360)
T PLN02586          9 HPQKAFGWAARDPSG---VLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF---TRYPIVPGHEIVGIVTKLG   82 (360)
T ss_pred             chhheeEEEecCCCC---CceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC---CCCCccCCcceeEEEEEEC
Confidence            478888888866543   4888888888999999999999999999999998886531   2568999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc-----------------------------------cCcccceeEeecCCceeeCCCCCChhhhc
Q 020314           83 SEVKNFKVGDKVVAVL-----------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGA  127 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~-----------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa  127 (327)
                      ++++++++||||+..+                                   .+|+|+||++++++.++++|+++++++++
T Consensus        83 ~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa  162 (360)
T PLN02586         83 KNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGA  162 (360)
T ss_pred             CCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhh
Confidence            9999999999997421                                   15899999999999999999999999999


Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCc-HHHHHhcCCCEEEeCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARN-IELVKSLGADEVLDYK  205 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~-~~~~~~lg~~~v~~~~  205 (327)
                      .+++++.|+|+++.+...+     ++|++|||.| +|++|++++|+|+.+|+++++++. +++ .+.++++|++.++++.
T Consensus       163 ~l~~~~~ta~~al~~~~~~-----~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~  236 (360)
T PLN02586        163 PLLCAGITVYSPMKYYGMT-----EPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVST  236 (360)
T ss_pred             hhhcchHHHHHHHHHhccc-----CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCC
Confidence            9999999999999666656     7899999987 699999999999999999888764 344 4566899999998765


Q ss_pred             CCCcccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHH
Q 020314          206 TPDGAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF  284 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (327)
                      +.+ .+.+.+  .++|++||++|.. .+..++++++++|+++.+|..... ..+....+..+...+.+ +......++++
T Consensus       237 ~~~-~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~-~~~~~~~~~~~~~~i~g-~~~~~~~~~~~  311 (360)
T PLN02586        237 DPE-KMKAAI--GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKP-LELPIFPLVLGRKLVGG-SDIGGIKETQE  311 (360)
T ss_pred             CHH-HHHhhc--CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCC-CccCHHHHHhCCeEEEE-cCcCCHHHHHH
Confidence            432 222222  2599999999975 488899999999999999864322 22333344555666655 33345678999


Q ss_pred             HHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          285 LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       285 ~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++++|++++.+ ++|+++|+++||+.+.+++..||+|+.+
T Consensus       312 ~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        312 MLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             HHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            99999999998766 5899999999999999999889999864

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-45  Score=328.17  Aligned_cols=303  Identities=16%  Similarity=0.203  Sum_probs=245.2

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHh-cCCCCCCCCCCCeeecccceEEEEecCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQK-GMLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~-g~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      ..+++.++.++++    +++++.+.| +.++||+|||.++|||++|++++. |.++.. +..+|.++|||++|+|+++  
T Consensus         3 ~~~~~~~~~~~~~----~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~-~~~~p~v~GhE~~G~V~~v--   74 (343)
T PRK09880          3 VKTQSCVVAGKKD----VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNF-VIKAPMVLGHEVIGKIVHS--   74 (343)
T ss_pred             ccceEEEEecCCc----eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccc-cccCCcccCcccEEEEEEe--
Confidence            4678999987665    899999887 689999999999999999999875 433211 2257899999999999999  


Q ss_pred             CCCCCCCCCEEEEEc--------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCc
Q 020314           84 EVKNFKVGDKVVAVL--------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPC  131 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~--------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~  131 (327)
                      ++++|++||||+..+                                .+|+|+||++++++.++++|+++++++++ +..
T Consensus        75 ~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~  153 (343)
T PRK09880         75 DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAE  153 (343)
T ss_pred             cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhc
Confidence            788999999998531                                25999999999999999999999987665 445


Q ss_pred             hHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHHhcCCCEEEeCCCCCc
Q 020314          132 AGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVKSLGADEVLDYKTPDG  209 (327)
Q Consensus       132 ~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~  209 (327)
                      ++.++|+++.+ ...     .++++|+|+| +|++|++++|+|+++|+ +|++++ +++|+++++++|++.++++++.+.
T Consensus       154 ~~~~a~~al~~-~~~-----~~g~~VlV~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~  226 (343)
T PRK09880        154 PLAVAIHAAHQ-AGD-----LQGKRVFVSG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDL  226 (343)
T ss_pred             HHHHHHHHHHh-cCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccH
Confidence            67899999954 444     5799999998 59999999999999999 688777 457899999999999998876542


Q ss_pred             ccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHH
Q 020314          210 AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL  288 (327)
Q Consensus       210 ~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (327)
                      ....... +++|++|||+|++ .+..++++++++|+++.+|..... ..+....+..+++++.+...  ..+++++++++
T Consensus       227 ~~~~~~~-g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~g~~~--~~~~~~~~~~l  302 (343)
T PRK09880        227 DHYKAEK-GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAP-PEFPMMTLIVKEISLKGSFR--FTEEFNTAVSW  302 (343)
T ss_pred             HHHhccC-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHHhCCcEEEEEee--ccccHHHHHHH
Confidence            2221122 3699999999975 488999999999999999864322 23344455677777777443  24678999999


Q ss_pred             HHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          289 VKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       289 ~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++|++++  +++++|+++|+++||+.+.+++..||+++.+
T Consensus       303 ~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        303 LANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             HHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            99999875  6788999999999999999988889999875

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=3.2e-45  Score=323.15  Aligned_cols=297  Identities=22%  Similarity=0.269  Sum_probs=247.6

Q ss_pred             EEEEeccCCCc-cceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314            9 AVQYDSYGGGV-AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN   87 (327)
Q Consensus         9 a~~~~~~g~~~-~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   87 (327)
                      ||.+.++|.+. +.+++++.+.|.|.++||+||+.++|+|++|++.+.|.++.   ..+|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~   77 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGG   77 (329)
T ss_pred             CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcc
Confidence            46677776532 56999999999999999999999999999999999887642   234789999999999999999999


Q ss_pred             CCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           88 FKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        88 ~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      +++||||+..+                            .+|+|+||+.+++..++++|+++++++++.+++++.|||++
T Consensus        78 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~  157 (329)
T TIGR02822        78 FAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRA  157 (329)
T ss_pred             cCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHH
Confidence            99999997421                            25899999999999999999999999999999999999999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGR  218 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~  218 (327)
                      +. ..++     ++|++|||+|+ |++|++++|+|+..|++|+++++ ++|+++++++|++.++++.+..        .+
T Consensus       158 ~~-~~~~-----~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~--------~~  222 (329)
T TIGR02822       158 LL-RASL-----PPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP--------PE  222 (329)
T ss_pred             HH-hcCC-----CCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC--------cc
Confidence            94 5677     89999999995 99999999999999999988874 5789999999999998754321        23


Q ss_pred             cccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEe
Q 020314          219 KYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV  297 (327)
Q Consensus       219 ~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~  297 (327)
                      ++|+++++.+. ..+..++++++++|+++.+|...+....+....+.++++++.+. ....+.++.++++++++++++. 
T Consensus       223 ~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~-~~~~~~~~~~~~~l~~~g~i~~-  300 (329)
T TIGR02822       223 PLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSV-TSNTRADAREFLELAAQHGVRV-  300 (329)
T ss_pred             cceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEe-ecCCHHHHHHHHHHHHhCCCee-
Confidence            68999988874 44889999999999999998643222223334445667777763 3345677899999999999974 


Q ss_pred             cceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          298 IDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       298 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      ++++|+|+|+++||+.+.+++..||+|+
T Consensus       301 i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       301 TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            5789999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=4.1e-45  Score=328.95  Aligned_cols=311  Identities=20%  Similarity=0.221  Sum_probs=254.9

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .|++||++++.+++++   +++++.+.|.|.++||+||+.++|+|++|++.+.|.++.  ...+|.++|||++|+|+++|
T Consensus         7 ~~~~mka~~~~~~~~~---~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~~p~i~GhE~~G~V~~vG   81 (381)
T PLN02740          7 KVITCKAAVAWGPGEP---LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA--QRAYPRILGHEAAGIVESVG   81 (381)
T ss_pred             cceeeEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc--cCCCCccccccceEEEEEeC
Confidence            3678999999887654   788899999999999999999999999999999887531  12578999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc---------------------------------------------------cCcccceeEeecC
Q 020314           83 SEVKNFKVGDKVVAVL---------------------------------------------------SGGGLAEFAVAKE  111 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~---------------------------------------------------~~g~~a~~~~~~~  111 (327)
                      ++++.+++||||++..                                                   .+|+|+||++++.
T Consensus        82 ~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~  161 (381)
T PLN02740         82 EGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDS  161 (381)
T ss_pred             CCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEeh
Confidence            9999999999998642                                                   1489999999999


Q ss_pred             CceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCc
Q 020314          112 SLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARN  189 (327)
Q Consensus       112 ~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~  189 (327)
                      +.++++|+++++++++.+++++.|+|+++.+..++     ++|++|||+| +|++|++++|+|+.+|+ +|+++++ ++|
T Consensus       162 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r  235 (381)
T PLN02740        162 ACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANV-----QAGSSVAIFG-LGAVGLAVAEGARARGASKIIGVDINPEK  235 (381)
T ss_pred             HHeEECCCCCCHHHhhhhcccchhhHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHCCCCcEEEEcCChHH
Confidence            99999999999999999999999999998777777     8999999998 69999999999999999 6888874 578


Q ss_pred             HHHHHhcCCCEEEeCCCCC---c-ccccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCchhH-HHHhhhh
Q 020314          190 IELVKSLGADEVLDYKTPD---G-AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPRVL-LTFAWKK  262 (327)
Q Consensus       190 ~~~~~~lg~~~v~~~~~~~---~-~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~  262 (327)
                      ++.++++|++.++++.+.+   . .+.+.+.+ ++|++||++|++ .+..++.+++++ |+++.+|...... ..+....
T Consensus       236 ~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~  314 (381)
T PLN02740        236 FEKGKEMGITDFINPKDSDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPME  314 (381)
T ss_pred             HHHHHHcCCcEEEecccccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHH
Confidence            9999999999998876532   1 23333444 899999999975 588999999996 9999998654321 1111111


Q ss_pred             ccccceeeEEEEeC--CCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          263 LTFSKKQLVPFSVS--PKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       263 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                       .++++++.+....  ....+++++++++.+++++.  +++++|+++|+++|++.+.+++. .|++|++
T Consensus       315 -~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        315 -LFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             -HhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence             2346667664432  22467899999999999754  68899999999999999998876 4998864

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.8e-46  Score=304.16  Aligned_cols=311  Identities=17%  Similarity=0.176  Sum_probs=266.7

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .+.++||.+..++++|   |.++++..++|+.+||+||+.++++|++|.+.+.|..+   ...||.++|||.+|+|+++|
T Consensus         4 kvI~CKAAV~w~a~~P---L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~---~~~fP~IlGHEaaGIVESvG   77 (375)
T KOG0022|consen    4 KVITCKAAVAWEAGKP---LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP---EGLFPVILGHEAAGIVESVG   77 (375)
T ss_pred             CceEEeEeeeccCCCC---eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCc---cccCceEecccceeEEEEec
Confidence            4678999999999998   99999999999999999999999999999999999853   34789999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc-------------------------------------------------cCcccceeEeecCCc
Q 020314           83 SEVKNFKVGDKVVAVL-------------------------------------------------SGGGLAEFAVAKESL  113 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~-------------------------------------------------~~g~~a~~~~~~~~~  113 (327)
                      ++|+++++||+|+...                                                 ..++|+||.+++...
T Consensus        78 egV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~  157 (375)
T KOG0022|consen   78 EGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDIS  157 (375)
T ss_pred             CCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecce
Confidence            9999999999998765                                                 345899999999999


Q ss_pred             eeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHH
Q 020314          114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIE  191 (327)
Q Consensus       114 ~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~  191 (327)
                      +.+|++..+++.++++.+...|.|.|....+++     ++|+++.|+| .|++|+++++-|++.|+ ++++++ +++|.+
T Consensus       158 v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv-----~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~  231 (375)
T KOG0022|consen  158 VAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKV-----EPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFE  231 (375)
T ss_pred             eEecCCCCChhheeEeeccccccchhhhhhccc-----CCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHH
Confidence            999999999999999999999999999999999     9999999999 99999999999999998 999998 779999


Q ss_pred             HHHhcCCCEEEeCCCCC---cccccCCCCCcccEEEeCCCCCc-ccccccccCCC-cEEEeecCCc-hhHHHHhhhhccc
Q 020314          192 LVKSLGADEVLDYKTPD---GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTT-GKVIDFNPSP-RVLLTFAWKKLTF  265 (327)
Q Consensus       192 ~~~~lg~~~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~  265 (327)
                      .++++|++..+|+.+..   .+.+....+.|+|+-|||+|+.. +.+++.+...+ |.-+.+|... +...+..... .+
T Consensus       232 ~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~-l~  310 (375)
T KOG0022|consen  232 KAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQ-LV  310 (375)
T ss_pred             HHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhh-hc
Confidence            99999999999987433   22333333479999999999765 88999999988 9999988443 2222222222 23


Q ss_pred             cceeeEEEEe--CCCHHHHHHHHHHHHCCce--eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          266 SKKQLVPFSV--SPKGENLDFLVKLVKEGKL--KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       266 ~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .+..+.+..+  ...+.++..+.+...++++  +..+++++||+++++||+.|.+|+.. |.|+.+
T Consensus       311 ~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  311 TGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             cccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence            3555665443  3467889999998888885  57999999999999999999999988 888764

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=5.3e-45  Score=327.35  Aligned_cols=305  Identities=19%  Similarity=0.204  Sum_probs=253.6

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      ..|||+++.++++   .+++++.+.|.+.++||+|||.++|+|++|++.+.+..      .+|.++|||++|+|+++|++
T Consensus        11 ~~mka~~~~~~~~---~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~------~~p~i~GhE~~G~V~~vG~~   81 (378)
T PLN02827         11 ITCRAAVAWGAGE---ALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA------LFPRIFGHEASGIVESIGEG   81 (378)
T ss_pred             ceeEEEEEecCCC---CceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC------CCCeeecccceEEEEEcCCC
Confidence            4699999987654   38899999999999999999999999999999887642      46789999999999999999


Q ss_pred             CCCCCCCCEEEEEcc------------------------------------------------CcccceeEeecCCceee
Q 020314           85 VKNFKVGDKVVAVLS------------------------------------------------GGGLAEFAVAKESLTVA  116 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~~------------------------------------------------~g~~a~~~~~~~~~~~~  116 (327)
                      ++++++||||+....                                                +|+|+||+.+++..+++
T Consensus        82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~  161 (378)
T PLN02827         82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK  161 (378)
T ss_pred             CcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEE
Confidence            999999999987531                                                27999999999999999


Q ss_pred             CCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHH
Q 020314          117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVK  194 (327)
Q Consensus       117 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~  194 (327)
                      +|+++++++++.+++++.++|+++.+..++     ++|++|||+| +|++|++++|+|+++|+ .|++++ +++|.+.++
T Consensus       162 iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~-----~~g~~VlV~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~  235 (378)
T PLN02827        162 VDPLAPLHKICLLSCGVAAGLGAAWNVADV-----SKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK  235 (378)
T ss_pred             CCCCCCHHHhhhhcchhHhhHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence            999999999999999989999888676777     8999999998 69999999999999999 477776 457888999


Q ss_pred             hcCCCEEEeCCCC--C-cc-cccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCchhHHHHhh-hhccccc
Q 020314          195 SLGADEVLDYKTP--D-GA-ALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPRVLLTFAW-KKLTFSK  267 (327)
Q Consensus       195 ~lg~~~v~~~~~~--~-~~-~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~  267 (327)
                      ++|++.++++.+.  + .+ +.+.+.+ ++|++||++|.+ .+..+++.++++ |+++.+|..... ..+.. ..+.+++
T Consensus       236 ~lGa~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~  313 (378)
T PLN02827        236 TFGVTDFINPNDLSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSG  313 (378)
T ss_pred             HcCCcEEEcccccchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcC
Confidence            9999999987653  2 12 3333443 899999999976 488999999998 999999865432 12211 2455678


Q ss_pred             eeeEEEEeC--CCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          268 KQLVPFSVS--PKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       268 ~~~~~~~~~--~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++.+....  ....+++.+++++++|++++  +++++|+++++++|++.+.+++. +|+||++
T Consensus       314 ~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        314 RTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             ceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence            888775432  23567899999999999987  78899999999999999999887 5998864

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=1.1e-44  Score=319.90  Aligned_cols=309  Identities=27%  Similarity=0.315  Sum_probs=252.3

Q ss_pred             eEEEEEeccCCCc--cceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            7 MHAVQYDSYGGGV--AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         7 ~~a~~~~~~g~~~--~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      ||++++.+++++.  +.+++++.+.|.|.++||+||+.++|+|++|++...|.++.  ...+|.++|||++|+|+++|++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~   78 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGGG   78 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECCC
Confidence            7899999887532  56888899999999999999999999999999999887642  1256889999999999999999


Q ss_pred             CCC-CCCCCEEEEEcc-CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE-c
Q 020314           85 VKN-FKVGDKVVAVLS-GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT-A  161 (327)
Q Consensus        85 ~~~-~~~Gd~V~~~~~-~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~-g  161 (327)
                      +++ +++||+|++... +|+|++|+.++++.++++|+++++++++.++..+.|||.++ +..+.      ++++++|+ +
T Consensus        79 v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~------~~~~vlv~~~  151 (324)
T cd08291          79 PLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE------EGAKAVVHTA  151 (324)
T ss_pred             ccccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc------CCCcEEEEcc
Confidence            986 999999998643 39999999999999999999999999998888888997554 44443      45556666 7


Q ss_pred             CCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccc
Q 020314          162 ASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPN  238 (327)
Q Consensus       162 ~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  238 (327)
                      ++|++|++++|+|+++|++++++++ +++++.++++|++.++++...+  ..+.+.+.++++|++||++|+......+++
T Consensus       152 g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~  231 (324)
T cd08291         152 AASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLA  231 (324)
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHh
Confidence            8999999999999999999998885 4788889999999999887655  234445566789999999998887888999


Q ss_pred             cCCCcEEEeecCCchhHH-HHhhhhccccceeeEEEEeC-----CCHHHHHHHHHHHHCCceeEecceeeccccHHHHHH
Q 020314          239 LGTTGKVIDFNPSPRVLL-TFAWKKLTFSKKQLVPFSVS-----PKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWA  312 (327)
Q Consensus       239 l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~  312 (327)
                      ++++|+++.+|....... .+....+..++.++.++...     ...+.+++++++++ +.+++.+.++|+++|+++||+
T Consensus       232 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~  310 (324)
T cd08291         232 MPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIA  310 (324)
T ss_pred             hCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHH
Confidence            999999999985432211 12223344556666554321     23567888999988 899999999999999999999


Q ss_pred             HHhcCCCCccEEE
Q 020314          313 KSISGRATGKIIV  325 (327)
Q Consensus       313 ~~~~~~~~gkvvv  325 (327)
                      .+.+++..||+++
T Consensus       311 ~~~~~~~~Gkvv~  323 (324)
T cd08291         311 FYSKNMSTGKKLL  323 (324)
T ss_pred             HHHhCCCCCeEEe
Confidence            9999999999987

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2.4e-44  Score=322.51  Aligned_cols=306  Identities=20%  Similarity=0.233  Sum_probs=248.8

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||++++...++.   +++++.+.|+|.++||+|||.++|+|++|++.+.|.++.   ..+|.++|||++|+|+++|++++
T Consensus         2 ~~a~~~~~~~~~---l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~   75 (368)
T TIGR02818         2 SRAAVAWAAGQP---LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVT   75 (368)
T ss_pred             ceEEEEecCCCC---eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCc
Confidence            899999887654   889999999999999999999999999999999887642   25789999999999999999999


Q ss_pred             CCCCCCEEEEEcc------------------------------------------------CcccceeEeecCCceeeCC
Q 020314           87 NFKVGDKVVAVLS------------------------------------------------GGGLAEFAVAKESLTVARP  118 (327)
Q Consensus        87 ~~~~Gd~V~~~~~------------------------------------------------~g~~a~~~~~~~~~~~~ip  118 (327)
                      ++++||||++...                                                .|+|+||+++++..++++|
T Consensus        76 ~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP  155 (368)
T TIGR02818        76 SVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKIN  155 (368)
T ss_pred             cCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECC
Confidence            9999999987421                                                2689999999999999999


Q ss_pred             CCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhc
Q 020314          119 QEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSL  196 (327)
Q Consensus       119 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~l  196 (327)
                      +++++++++.+++++.|+|+++.+..++     ++|++|||+| +|++|++++|+|+++|+ +|+++++ ++|++.++++
T Consensus       156 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~-----~~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~  229 (368)
T TIGR02818       156 PAAPLEEVCLLGCGVTTGIGAVLNTAKV-----EEGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKL  229 (368)
T ss_pred             CCCCHHHhhhhcchhHHHHHHHHHhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh
Confidence            9999999999999999999998777777     8999999998 69999999999999999 7988874 5788999999


Q ss_pred             CCCEEEeCCCCC----cccccCCCCCcccEEEeCCCCCc-ccccccccCCC-cEEEeecCCch-hHHHHhhhhcccccee
Q 020314          197 GADEVLDYKTPD----GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTT-GKVIDFNPSPR-VLLTFAWKKLTFSKKQ  269 (327)
Q Consensus       197 g~~~v~~~~~~~----~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~  269 (327)
                      |++.++++.+.+    ..+.+.+.+ ++|++|||+|++. +..++++++++ |+++.+|.... ....+....+. ....
T Consensus       230 Ga~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~  307 (368)
T TIGR02818       230 GATDCVNPNDYDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRV  307 (368)
T ss_pred             CCCeEEcccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccce
Confidence            999999876422    123333444 8999999999754 88899999886 99999986431 11111111222 2223


Q ss_pred             eEEEEeC--CCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          270 LVPFSVS--PKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       270 ~~~~~~~--~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +.+....  ..+.+++++++++++++++  ++++++|+++|+++|++.+.+++. .|+++.+
T Consensus       308 ~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       308 WRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             EEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            4443221  2356789999999999975  578899999999999999988765 6998864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.4e-44  Score=322.15  Aligned_cols=307  Identities=18%  Similarity=0.248  Sum_probs=251.1

Q ss_pred             ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      ++||+.+...+. +..+++.+.+.|+|.++||+|||.++|+|++|++.+.|.++.   ..+|.++|||++|+|+++|+++
T Consensus         4 ~~~a~~~~~~~~-~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~---~~~p~i~GhE~aG~Vv~vG~~v   79 (375)
T PLN02178          4 QNKAFGWAANDE-SGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF---SRYPIIPGHEIVGIATKVGKNV   79 (375)
T ss_pred             cceeEEEEEccC-CCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC---CCCCcccCceeeEEEEEECCCC
Confidence            467777776664 356888888888999999999999999999999999887531   2468899999999999999999


Q ss_pred             CCCCCCCEEEEEc-----------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314           86 KNFKVGDKVVAVL-----------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP  130 (327)
Q Consensus        86 ~~~~~Gd~V~~~~-----------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~  130 (327)
                      +++++||||+..+                                   .+|+|+||+.++++.++++|+++++++++.++
T Consensus        80 ~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~  159 (375)
T PLN02178         80 TKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLL  159 (375)
T ss_pred             CccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhh
Confidence            9999999997421                                   15899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-C-cHHHHHhcCCCEEEeCCCCC
Q 020314          131 CAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-R-NIELVKSLGADEVLDYKTPD  208 (327)
Q Consensus       131 ~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~-~~~~~~~lg~~~v~~~~~~~  208 (327)
                      +++.|+|+++.+....    .+++++|+|.| +|++|++++|+|+++|++|+++++. + +.+.++++|++.++++.+. 
T Consensus       160 ~~~~ta~~al~~~~~~----~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~-  233 (375)
T PLN02178        160 CAGITVYSPMKYYGMT----KESGKRLGVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS-  233 (375)
T ss_pred             ccchHHHHHHHHhCCC----CCCCCEEEEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH-
Confidence            9999999998544321    15899999998 6999999999999999998888743 3 4677889999999876542 


Q ss_pred             cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHH
Q 020314          209 GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVK  287 (327)
Q Consensus       209 ~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (327)
                      ..+.+.+  .++|++|||+|.+ .+..++++++++|+++.+|..... ..+....+.++++++.+ +.....++++++++
T Consensus       234 ~~v~~~~--~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~-~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~  309 (375)
T PLN02178        234 QKMKEAV--GTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKP-LDLPIFPLVLGRKMVGG-SQIGGMKETQEMLE  309 (375)
T ss_pred             HHHHHhh--CCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCC-CccCHHHHHhCCeEEEE-eCccCHHHHHHHHH
Confidence            2222223  2699999999976 588999999999999999864322 23344455667777877 33345678999999


Q ss_pred             HHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          288 LVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       288 ~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++|++++.+ ++|+|+|+++||+.+.+++..||+|+.+
T Consensus       310 l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        310 FCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             HHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            99999998776 5799999999999999999889999864

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=8.5e-44  Score=319.20  Aligned_cols=307  Identities=20%  Similarity=0.225  Sum_probs=249.7

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      .+|||+++.+++++   +++++.+.|.|.++||+||+.++|+|++|++.+.|.++.   ..+|.++|||++|+|+++|++
T Consensus         1 ~~~~a~~~~~~~~~---~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~   74 (368)
T cd08300           1 ITCKAAVAWEAGKP---LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEG   74 (368)
T ss_pred             CcceEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCC
Confidence            36899999877654   889999999999999999999999999999999887542   257899999999999999999


Q ss_pred             CCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCceee
Q 020314           85 VKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLTVA  116 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~~~  116 (327)
                      ++++++||||++..                                                ..|+|+||+.+++..+++
T Consensus        75 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  154 (368)
T cd08300          75 VTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAK  154 (368)
T ss_pred             CccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEe
Confidence            99999999998741                                                135899999999999999


Q ss_pred             CCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHH
Q 020314          117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVK  194 (327)
Q Consensus       117 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~  194 (327)
                      +|+++++++++.+++++.|+|+++.+..++     +++++|||+| +|++|++++|+|+.+|+ +|+++++ ++|++.++
T Consensus       155 iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~-----~~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~  228 (368)
T cd08300         155 INPEAPLDKVCLLGCGVTTGYGAVLNTAKV-----EPGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAK  228 (368)
T ss_pred             CCCCCChhhhhhhccchhhhHHHHHHhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence            999999999999999999999998777777     8999999998 69999999999999999 6888874 57888999


Q ss_pred             hcCCCEEEeCCCCC----cccccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCch-hHHHHhhhhccccc
Q 020314          195 SLGADEVLDYKTPD----GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPR-VLLTFAWKKLTFSK  267 (327)
Q Consensus       195 ~lg~~~v~~~~~~~----~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~  267 (327)
                      ++|++.++++.+.+    ..+.+.+.+ ++|++||++|++ .+..++++++++ |+++.+|.... .........+. ..
T Consensus       229 ~lGa~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~  306 (368)
T cd08300         229 KFGATDCVNPKDHDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TG  306 (368)
T ss_pred             HcCCCEEEcccccchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hc
Confidence            99999999876542    123333444 899999999975 588899999886 99999986531 11111111111 22


Q ss_pred             eeeEEEEe--CCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          268 KQLVPFSV--SPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       268 ~~~~~~~~--~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      ..+.+...  ...++++++++++++++++++  +++++|+++|+++||+.+.+++. .|++++
T Consensus       307 ~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         307 RVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             CeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            33444332  235678899999999999874  67899999999999999988775 588874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=6.9e-44  Score=320.14  Aligned_cols=306  Identities=19%  Similarity=0.189  Sum_probs=251.7

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      ++|||+++.+++++   +++++.+.|++.++||+||+.++|+|++|++.+.|..+   ...+|.++|||++|+|+++|++
T Consensus         1 ~~~ka~~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~   74 (369)
T cd08301           1 ITCKAAVAWEAGKP---LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEG   74 (369)
T ss_pred             CccEEEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCC
Confidence            47999999887654   89999999999999999999999999999999988753   2357899999999999999999


Q ss_pred             CCCCCCCCEEEEEc-------------------------------------------------cCcccceeEeecCCcee
Q 020314           85 VKNFKVGDKVVAVL-------------------------------------------------SGGGLAEFAVAKESLTV  115 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~-------------------------------------------------~~g~~a~~~~~~~~~~~  115 (327)
                      ++++++||||+..+                                                 ..|+|+||..+++..++
T Consensus        75 v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  154 (369)
T cd08301          75 VTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVA  154 (369)
T ss_pred             CCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEE
Confidence            99999999998742                                                 13789999999999999


Q ss_pred             eCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHH
Q 020314          116 ARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELV  193 (327)
Q Consensus       116 ~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~  193 (327)
                      ++|+++++++++.+++++.|+|+++.+..++     ++|++|||+| +|++|++++|+|+.+|+ +|+++++ +++.+++
T Consensus       155 ~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~  228 (369)
T cd08301         155 KINPEAPLDKVCLLSCGVSTGLGAAWNVAKV-----KKGSTVAIFG-LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQA  228 (369)
T ss_pred             ECCCCCCHHHhhhhcchhhHHHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            9999999999999999999999998777777     8999999998 69999999999999999 7988884 5788899


Q ss_pred             HhcCCCEEEeCCCC--C-cc-cccCCCCCcccEEEeCCCCCc-ccccccccCCC-cEEEeecCCchh-HHHHhhhhcccc
Q 020314          194 KSLGADEVLDYKTP--D-GA-ALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTT-GKVIDFNPSPRV-LLTFAWKKLTFS  266 (327)
Q Consensus       194 ~~lg~~~v~~~~~~--~-~~-~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~  266 (327)
                      +++|++.++++.+.  . .+ +.+.+. +++|++||++|+.. +..++++++++ |+++.+|..... ...+.... .++
T Consensus       229 ~~~Ga~~~i~~~~~~~~~~~~v~~~~~-~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~-~~~  306 (369)
T cd08301         229 KKFGVTEFVNPKDHDKPVQEVIAEMTG-GGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMN-LLN  306 (369)
T ss_pred             HHcCCceEEcccccchhHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHH-Hhc
Confidence            99999998887652  2 12 223333 37999999999764 78889999996 999999865421 12222222 235


Q ss_pred             ceeeEEEEeC--CCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          267 KKQLVPFSVS--PKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       267 ~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      ++++.+....  ..+.+++++++++.++.++.  +++++|+++|+++||+.+.+++.. |+++
T Consensus       307 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         307 GRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             CCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence            6667764332  23567899999999998754  678899999999999999998875 8876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-44  Score=316.33  Aligned_cols=314  Identities=23%  Similarity=0.259  Sum_probs=249.6

Q ss_pred             CccceEEEEEeccCCC---ccceEEeec---cCC-CCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecc--c
Q 020314            3 GKAVMHAVQYDSYGGG---VAGLKHVEV---PVP-TPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPAS--D   73 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~---~~~l~~~~~---~~~-~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~--e   73 (327)
                      .+.++|.|++.+..++   +++|++++.   +.| ++.+||||||+.++++|+.|+..+.+....   ...|.++|+  |
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~---~~~p~~~G~~~~   81 (348)
T PLN03154          5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDS---YLPPFVPGQRIE   81 (348)
T ss_pred             ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCC---CCCCcCCCCeeE
Confidence            4677899999765421   466888874   554 357999999999999999998755442221   135788997  8


Q ss_pred             ceEEEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCc--ee--eCCCCCChh-hhcccCchHHHHHHHHHHhhCCcc
Q 020314           74 VAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESL--TV--ARPQEVSAA-EGAGIPCAGLTAHQALTQSLGVKL  148 (327)
Q Consensus        74 ~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~--~~--~ip~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~  148 (327)
                      ++|+|..+|++++++++||+|+++   |+|++|..++...  ++  ++|++++++ +++.+++++.|||+++.+..++  
T Consensus        82 ~~G~v~~vg~~v~~~~~Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~--  156 (348)
T PLN03154         82 GFGVSKVVDSDDPNFKPGDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSP--  156 (348)
T ss_pred             eeEEEEEEecCCCCCCCCCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCC--
Confidence            899999999999999999999874   6899999998753  54  459999986 6889999999999999777778  


Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-hcCCCEEEeCCCC-C-cccccCCCCCcccEEE
Q 020314          149 DGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-SLGADEVLDYKTP-D-GAALKSPSGRKYDAVI  224 (327)
Q Consensus       149 ~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~lg~~~v~~~~~~-~-~~~~~~~~~~~~d~v~  224 (327)
                         ++|++|||+|++|++|++++|+|+++|++|++++++ ++.+.++ ++|++.++++++. + .+.+....++++|++|
T Consensus       157 ---~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~  233 (348)
T PLN03154        157 ---KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYF  233 (348)
T ss_pred             ---CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEE
Confidence               899999999999999999999999999999988754 6788776 7999999998643 3 2222222235899999


Q ss_pred             eCCCCCcccccccccCCCcEEEeecCCchhHH-----HHhhhhccccceeeEEEEeCC----CHHHHHHHHHHHHCCcee
Q 020314          225 NCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLL-----TFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       225 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~  295 (327)
                      |++|+..+..++++++++|+++.+|.......     ......+.++++++.+++...    ..+.++++++++++|+++
T Consensus       234 d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~  313 (348)
T PLN03154        234 DNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIV  313 (348)
T ss_pred             ECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            99998788999999999999999986432211     112234556777777754321    245678899999999999


Q ss_pred             EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          296 TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       296 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +.+...|+|+++++||+.+++++..||+|+++
T Consensus       314 ~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~  345 (348)
T PLN03154        314 YIEDMSEGLESAPAALVGLFSGKNVGKQVIRV  345 (348)
T ss_pred             CceecccCHHHHHHHHHHHHcCCCCceEEEEe
Confidence            88878899999999999999999999999874

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.4e-43  Score=316.18  Aligned_cols=305  Identities=22%  Similarity=0.298  Sum_probs=252.6

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      ..+++|++.++++.   +++++.+.|++.++||+||+.++|+|++|++.+.|.++.   ..+|.++|||++|+|+++|++
T Consensus         8 ~~~~~~~~~~~~~~---~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~   81 (357)
T PLN02514          8 KKTTGWAARDPSGH---LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSD   81 (357)
T ss_pred             ceEEEEEEecCCCC---ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCC
Confidence            34899999988865   899999999999999999999999999999998886531   246889999999999999999


Q ss_pred             CCCCCCCCEEEEEc-----------------------------------cCcccceeEeecCCceeeCCCCCChhhhccc
Q 020314           85 VKNFKVGDKVVAVL-----------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGI  129 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~-----------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~  129 (327)
                      ++++++||+|+..+                                   .+|+|++|+.++...++++|+++++++++.+
T Consensus        82 v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  161 (357)
T PLN02514         82 VSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPL  161 (357)
T ss_pred             cccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhh
Confidence            99999999997421                                   2589999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCCC
Q 020314          130 PCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKTP  207 (327)
Q Consensus       130 ~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~  207 (327)
                      ++++.|||+++.+....     ++|++|+|+| +|++|++++|+|+++|++++++++. +++. .++++|++.++++.+.
T Consensus       162 ~~~~~ta~~al~~~~~~-----~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~  235 (357)
T PLN02514        162 LCAGVTVYSPLSHFGLK-----QSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA  235 (357)
T ss_pred             hhhHHHHHHHHHHcccC-----CCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh
Confidence            99999999999665555     7899999997 7999999999999999998888754 4544 4467999887765432


Q ss_pred             CcccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHH
Q 020314          208 DGAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLV  286 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (327)
                      . .+.+.+  .++|++||++|.. .+..++++++++|+++.+|..... ..+....+.++++++.+. ......++++++
T Consensus       236 ~-~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~-~~~~~~~~~~~~  310 (357)
T PLN02514        236 A-EMQEAA--DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTP-LQFVTPMLMLGRKVITGS-FIGSMKETEEML  310 (357)
T ss_pred             H-HHHHhc--CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCC-CcccHHHHhhCCcEEEEE-ecCCHHHHHHHH
Confidence            1 222222  3699999999964 588899999999999999965432 234445566777888874 344567899999


Q ss_pred             HHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          287 KLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       287 ~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++|++++.+ ++|+++|+.+||+.+.+++..||+++.+
T Consensus       311 ~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~  350 (357)
T PLN02514        311 EFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_pred             HHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence            999999998766 5899999999999999999889999864

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=8.8e-44  Score=317.84  Aligned_cols=308  Identities=20%  Similarity=0.245  Sum_probs=238.2

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++...+  ++ +++++.+.|+|.++||+|||.++|||++|++.+.|.++...+..+|.++|||++|+|+++|++ +
T Consensus         1 mka~~~~~~~--~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~   76 (355)
T cd08230           1 MKAIAVKPGK--PG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S   76 (355)
T ss_pred             CceeEecCCC--CC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-C
Confidence            6899997533  23 899999999999999999999999999999999987643222246899999999999999999 9


Q ss_pred             CCCCCCEEEEEc------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHH
Q 020314           87 NFKVGDKVVAVL------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTA  136 (327)
Q Consensus        87 ~~~~Gd~V~~~~------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  136 (327)
                      .|++||||+...                              .+|+|+||+.++++.++++|++++  +++++..++.++
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~  154 (355)
T cd08230          77 GLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVV  154 (355)
T ss_pred             CCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHHH
Confidence            999999998642                              248899999999999999999998  445555566666


Q ss_pred             HHHHHHhhCCc-cCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec----CCcHHHHHhcCCCEEEeCCCCCccc
Q 020314          137 HQALTQSLGVK-LDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG----ARNIELVKSLGADEVLDYKTPDGAA  211 (327)
Q Consensus       137 ~~al~~~~~~~-~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~----~~~~~~~~~lg~~~v~~~~~~~~~~  211 (327)
                      ++++.....+. ....+++++|+|+| +|++|++++|+|+..|++|+++++    ++|++.++++|++. +++.+.+...
T Consensus       155 ~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~~~  232 (355)
T cd08230         155 EKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPVAE  232 (355)
T ss_pred             HHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccchhh
Confidence            65553322110 00116899999998 699999999999999999998875    35788899999987 4554433211


Q ss_pred             ccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCch-hHHHHh----hhhccccceeeEEEEeCCCHHHHHHH
Q 020314          212 LKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPR-VLLTFA----WKKLTFSKKQLVPFSVSPKGENLDFL  285 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
                      ..  ...++|++|||+|++ .+..++++++++|+++.+|.... ....+.    ...+.++++++.+. .....++++++
T Consensus       233 ~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~-~~~~~~~~~~~  309 (355)
T cd08230         233 VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGS-VNANKRHFEQA  309 (355)
T ss_pred             hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEe-cCCchhhHHHH
Confidence            11  235799999999976 48899999999999999986543 112222    34567788888884 34456778899


Q ss_pred             HHHHHCCc------eeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          286 VKLVKEGK------LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       286 ~~~~~~g~------l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++.++.      +++.++++|+++|+++||+.+.++.  +|+++.+
T Consensus       310 ~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         310 VEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            99998776      5667889999999999999987654  5999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1e-43  Score=310.79  Aligned_cols=293  Identities=19%  Similarity=0.263  Sum_probs=231.8

Q ss_pred             ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeC-hhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASIN-PIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~-~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      +||++++.+++    .+++++.+.|+|.++||+||+.++||| .+|++.+.|.++......+|.++|||++|+|+++|++
T Consensus         1 ~~ka~~~~~~~----~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~   76 (308)
T TIGR01202         1 KTQAIVLSGPN----QIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD   76 (308)
T ss_pred             CceEEEEeCCC----eEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence            58999997644    499999999999999999999999996 6999998887643211257999999999999999999


Q ss_pred             CCCCCCCCEEEEEc---------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCC
Q 020314           85 VKNFKVGDKVVAVL---------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQK  155 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~---------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~  155 (327)
                      + ++++||||+...         ..|+|+||+.++++.++++|++++++. +.++ ++.|||+++.+ . .     .+++
T Consensus        77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~-----~~~~  146 (308)
T TIGR01202        77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-E-----VKVL  146 (308)
T ss_pred             C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-c-----cCCC
Confidence            8 699999998632         159999999999999999999999864 4444 46899999954 2 2     4678


Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEe-c-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-c
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATC-G-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-W  232 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~  232 (327)
                      +++|+| +|++|++++|+|+++|+++++++ . ++|++.+..   ..++|+.+.        .+.++|++|||+|++. +
T Consensus       147 ~vlV~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~~~i~~~~~--------~~~g~Dvvid~~G~~~~~  214 (308)
T TIGR01202       147 PDLIVG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---YEVLDPEKD--------PRRDYRAIYDASGDPSLI  214 (308)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---ccccChhhc--------cCCCCCEEEECCCCHHHH
Confidence            899998 79999999999999999755544 2 245554443   334544321        2357999999999865 7


Q ss_pred             cccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHH
Q 020314          233 STFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDA  310 (327)
Q Consensus       233 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a  310 (327)
                      ..++++++++|+++.+|..... ..+....+..+++++.+ +.....++++++++++++|++++  ++++.|+++|+++|
T Consensus       215 ~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A  292 (308)
T TIGR01202       215 DTLVRRLAKGGEIVLAGFYTEP-VNFDFVPAFMKEARLRI-AAEWQPGDLHAVRELIESGALSLDGLITHQRPASDAAEA  292 (308)
T ss_pred             HHHHHhhhcCcEEEEEeecCCC-cccccchhhhcceEEEE-ecccchhHHHHHHHHHHcCCCChhhccceeecHHHHHHH
Confidence            8999999999999999865332 23344455566677766 33445678999999999999864  78899999999999


Q ss_pred             HHHHhcCCCCccEEEe
Q 020314          311 WAKSISGRATGKIIVE  326 (327)
Q Consensus       311 ~~~~~~~~~~gkvvv~  326 (327)
                      ++.+.++...+|++++
T Consensus       293 ~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       293 YMTAFSDPDCLKMILD  308 (308)
T ss_pred             HHHHhcCcCceEEEeC
Confidence            9998877777899874

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=2.1e-43  Score=316.32  Aligned_cols=306  Identities=19%  Similarity=0.206  Sum_probs=250.4

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      ++|||+++.+.++.   +++++.+.|.+.++||+||+.++|+|++|++.+.|..+    ..+|.++|||++|+|+++|++
T Consensus         1 ~~~ka~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~   73 (365)
T cd08277           1 IKCKAAVAWEAGKP---LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEG   73 (365)
T ss_pred             CccEEEEEccCCCC---cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCC
Confidence            46899999876654   88999999999999999999999999999999988753    357899999999999999999


Q ss_pred             CCCCCCCCEEEEEc-----------------------------------------------cCcccceeEeecCCceeeC
Q 020314           85 VKNFKVGDKVVAVL-----------------------------------------------SGGGLAEFAVAKESLTVAR  117 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~-----------------------------------------------~~g~~a~~~~~~~~~~~~i  117 (327)
                      ++++++||||++..                                               ..|+|+||++++.+.++++
T Consensus        74 v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~l  153 (365)
T cd08277          74 VTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKI  153 (365)
T ss_pred             CccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEEC
Confidence            99999999998742                                               1478999999999999999


Q ss_pred             CCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHh
Q 020314          118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKS  195 (327)
Q Consensus       118 p~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~  195 (327)
                      |+++++++++.+++++.|||+++.+..++     ++|++|+|+| +|++|++++++|+++|+ +|+++++ ++|++.+++
T Consensus       154 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~-----~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~  227 (365)
T cd08277         154 DPAAPLEHVCLLGCGFSTGYGAAWNTAKV-----EPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE  227 (365)
T ss_pred             CCCCCHHHhhHhcchhHHHHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence            99999999999999999999998777777     8999999997 69999999999999999 7888875 478888999


Q ss_pred             cCCCEEEeCCCCC---c-ccccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCchhHHHHhhhhcccccee
Q 020314          196 LGADEVLDYKTPD---G-AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPRVLLTFAWKKLTFSKKQ  269 (327)
Q Consensus       196 lg~~~v~~~~~~~---~-~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~  269 (327)
                      +|++.++++.+.+   . .+.+.+. +++|++|||+|+. .+..++++++++ |+++.+|...+....+....+.. +++
T Consensus       228 ~ga~~~i~~~~~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~  305 (365)
T cd08277         228 FGATDFINPKDSDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRT  305 (365)
T ss_pred             cCCCcEeccccccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCE
Confidence            9999998876532   1 2333344 5899999999964 478899999885 99999986542212222222222 556


Q ss_pred             eEEEEeC--CCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          270 LVPFSVS--PKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       270 ~~~~~~~--~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      +.+.+..  .....+++++++++++.++  ++++++|+++|+++||+.+.+++. .|+++.
T Consensus       306 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~  365 (365)
T cd08277         306 WKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT  365 (365)
T ss_pred             EEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence            6664332  2356789999999998755  578899999999999999998874 588863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-43  Score=313.77  Aligned_cols=305  Identities=22%  Similarity=0.268  Sum_probs=246.6

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      |||+++++++.    +++++.+.|++ .++||+||+.++|+|++|++...+...    ..+|.++|||++|+|+++|+++
T Consensus         1 Mka~~~~~~~~----~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~----~~~p~i~G~e~~G~V~~vG~~v   72 (347)
T PRK10309          1 MKSVVNDTDGI----VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA----HYYPITLGHEFSGYVEAVGSGV   72 (347)
T ss_pred             CceEEEeCCCc----eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC----CCCCcccccceEEEEEEeCCCC
Confidence            79999987654    89999999987 589999999999999999975432211    1357899999999999999999


Q ss_pred             CCCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           86 KNFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        86 ~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      +++++||||++.+                           ..|+|++|+.++++.++++|+++++++++.+. +++++|+
T Consensus        73 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~  151 (347)
T PRK10309         73 DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH  151 (347)
T ss_pred             CCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence            9999999998753                           26899999999999999999999999998774 4566888


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCC-cccccCC
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKTPD-GAALKSP  215 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~  215 (327)
                      ++ +..++     +++++|+|+| +|++|++++|+|+.+|++ |+++++ +++++.++++|++.++++++.+ ..+.+.+
T Consensus       152 ~~-~~~~~-----~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~  224 (347)
T PRK10309        152 AF-HLAQG-----CEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVL  224 (347)
T ss_pred             HH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHh
Confidence            86 55666     7899999997 699999999999999996 677764 4788888999999998876544 2334445


Q ss_pred             CCCccc-EEEeCCCCC-cccccccccCCCcEEEeecCCchhH-H-HHhhhhccccceeeEEEEeCC----CHHHHHHHHH
Q 020314          216 SGRKYD-AVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVL-L-TFAWKKLTFSKKQLVPFSVSP----KGENLDFLVK  287 (327)
Q Consensus       216 ~~~~~d-~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  287 (327)
                      .+.++| ++|||+|++ .+..++++++++|+++.+|...... . ......+..+++++.+.+...    ..++++.+++
T Consensus       225 ~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  304 (347)
T PRK10309        225 RELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASR  304 (347)
T ss_pred             cCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHH
Confidence            556788 999999975 5889999999999999998643321 1 111224556777777744321    2578899999


Q ss_pred             HHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          288 LVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       288 ~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++|.++  +.++++|+++|+++|++.+.+++..||+|+++
T Consensus       305 ~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        305 LLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             HHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            99999974  67889999999999999999998889999875

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=3.5e-43  Score=316.05  Aligned_cols=304  Identities=18%  Similarity=0.212  Sum_probs=235.6

Q ss_pred             ceEEEEEeccCCCccceEEeeccCCCCC-------CCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEE
Q 020314            6 VMHAVQYDSYGGGVAGLKHVEVPVPTPN-------KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEV   78 (327)
Q Consensus         6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~-------~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V   78 (327)
                      -|||+++.++++    +++++.+.|+|.       ++||+|||.++|||++|++++.|.++    ..+|.++|||++|+|
T Consensus         2 ~mka~v~~~~~~----~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~----~~~p~i~GhE~~G~V   73 (393)
T TIGR02819         2 GNRGVVYLGPGK----VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT----APTGLVLGHEITGEV   73 (393)
T ss_pred             CceEEEEecCCc----eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC----CCCCccccceeEEEE
Confidence            489999987665    899999998874       68999999999999999999988653    256899999999999


Q ss_pred             EecCCCCCCCCCCCEEEEEc-------------------------------------cCcccceeEeecCC--ceeeCCC
Q 020314           79 IGLGSEVKNFKVGDKVVAVL-------------------------------------SGGGLAEFAVAKES--LTVARPQ  119 (327)
Q Consensus        79 ~~vG~~~~~~~~Gd~V~~~~-------------------------------------~~g~~a~~~~~~~~--~~~~ip~  119 (327)
                      +++|++++++++||||+..+                                     .+|+|+||+++++.  +++++|+
T Consensus        74 ~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~  153 (393)
T TIGR02819        74 IEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPD  153 (393)
T ss_pred             EEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCC
Confidence            99999999999999997631                                     24899999999964  7999999


Q ss_pred             CCCh----hhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-c-CCcHHHH
Q 020314          120 EVSA----AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-G-ARNIELV  193 (327)
Q Consensus       120 ~~~~----~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~-~~~~~~~  193 (327)
                      +++.    .+++.+.+++.++|+++. ..++     +++++|||.| +|++|++++|+|+++|++++.++ + ++|++++
T Consensus       154 ~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~-----~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a  226 (393)
T TIGR02819       154 RDQALEKIRDLTMLSDIFPTGYHGAV-TAGV-----GPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA  226 (393)
T ss_pred             cccccccccceeeeccHHHHHHHHHH-hcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH
Confidence            8653    356777888999999984 5666     8999999966 79999999999999999755543 3 4689999


Q ss_pred             HhcCCCEEEeCC-CCC--cccccCCCCCcccEEEeCCCCC---------------cccccccccCCCcEEEeecCCc-hh
Q 020314          194 KSLGADEVLDYK-TPD--GAALKSPSGRKYDAVINCVTGI---------------PWSTFEPNLGTTGKVIDFNPSP-RV  254 (327)
Q Consensus       194 ~~lg~~~v~~~~-~~~--~~~~~~~~~~~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~-~~  254 (327)
                      +++|++. +++. +.+  ..+.+.+.++++|++||++|.+               .++.++++++++|+++.+|... +.
T Consensus       227 ~~~Ga~~-v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~  305 (393)
T TIGR02819       227 RSFGCET-VDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTED  305 (393)
T ss_pred             HHcCCeE-EecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcc
Confidence            9999975 4443 223  2234445667899999999975               5889999999999999999652 11


Q ss_pred             HH-----------HHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE--ecc-eeeccccHHHHHHHHhcCCCC
Q 020314          255 LL-----------TFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VID-SKHSLSKAEDAWAKSISGRAT  320 (327)
Q Consensus       255 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~-~~~~~~~~~~a~~~~~~~~~~  320 (327)
                      ..           .+.......++.++.+ ......+.+.++++++++|+++.  +++ ++|+++++++||+.+.+++. 
T Consensus       306 ~~~~~~~~~~~~~~i~~~~~~~~~~~i~g-~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-  383 (393)
T TIGR02819       306 PGAVDAAAKTGSLSIRFGLGWAKSHSFHT-GQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-  383 (393)
T ss_pred             cccccccccccccccchHHhhccCceEEe-ccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-
Confidence            11           1112222333444443 22222244578999999999864  455 78999999999999998754 


Q ss_pred             ccEEEeC
Q 020314          321 GKIIVEP  327 (327)
Q Consensus       321 gkvvv~~  327 (327)
                      +|+++.+
T Consensus       384 ~Kvvi~~  390 (393)
T TIGR02819       384 KKFVIDP  390 (393)
T ss_pred             eEEEEeC
Confidence            7999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=8.6e-43  Score=308.04  Aligned_cols=312  Identities=24%  Similarity=0.321  Sum_probs=257.5

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.+++++++.+++++.+.|.+.++||+||+.++++|+.|++.+.|.++.  ...+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v~   78 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGVK   78 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCCC
Confidence            689999887764466899999999999999999999999999999998887642  124578999999999999999999


Q ss_pred             CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314           87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV  166 (327)
Q Consensus        87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~  166 (327)
                      ++++||+|++....|+|++|++++...++++|+++++++++.++..+.++|+++ ...++     +++++|||+|++|.+
T Consensus        79 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~-----~~g~~vlI~g~~g~i  152 (324)
T cd08292          79 GLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGV-----KPGQWLIQNAAGGAV  152 (324)
T ss_pred             CCCCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCC-----CCCCEEEEcccccHH
Confidence            999999999865589999999999999999999999999999998889999998 45677     899999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCc
Q 020314          167 GLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG  243 (327)
Q Consensus       167 G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G  243 (327)
                      |++++++|+++|++++++++. ++.+.++++|.+.++++.+.+  ..+.+.+.++++|++|||+|+.....++++++++|
T Consensus       153 g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g  232 (324)
T cd08292         153 GKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGG  232 (324)
T ss_pred             HHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCc
Confidence            999999999999999888754 666777778998888876654  23445567788999999999888889999999999


Q ss_pred             EEEeecCCchhHHHHhhhhccccceeeEEEEeC----C-----CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314          244 KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS----P-----KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS  314 (327)
Q Consensus       244 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~  314 (327)
                      +++.+|........+......+++..+.+....    .     ..+.++.+++++.+|.+++.+.+.|++++++++++.+
T Consensus       233 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~  312 (324)
T cd08292         233 TLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAAS  312 (324)
T ss_pred             EEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHH
Confidence            999998543221222222233455555543221    0     1356888999999999986667889999999999999


Q ss_pred             hcCCCCccEEEe
Q 020314          315 ISGRATGKIIVE  326 (327)
Q Consensus       315 ~~~~~~gkvvv~  326 (327)
                      .++...||+++.
T Consensus       313 ~~~~~~~kvvv~  324 (324)
T cd08292         313 MRPGRAGKVLLR  324 (324)
T ss_pred             HcCCCCceEEeC
Confidence            988888999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=8.5e-43  Score=282.47  Aligned_cols=317  Identities=26%  Similarity=0.312  Sum_probs=271.5

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .|...|++++.++|+|.+.+++++.++|+...++|+||.+++.|||+|+..++|.||.. | ++|.+-|+|++|+|+.+|
T Consensus        16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr-P-~~PAVgGnEGv~eVv~vG   93 (354)
T KOG0025|consen   16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR-P-ELPAVGGNEGVGEVVAVG   93 (354)
T ss_pred             cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCC-C-CCCcccCCcceEEEEEec
Confidence            35567999999999999999999999999888889999999999999999999999743 2 678999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc-cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314           83 SEVKNFKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      +++++|++||+|+... ..|.|++|.+.+++.++++++.++++.||++....+|||..|.+..++     .+|++|+-.|
T Consensus        94 s~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L-----~~GD~vIQNg  168 (354)
T KOG0025|consen   94 SNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQL-----NKGDSVIQNG  168 (354)
T ss_pred             CCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhc-----CCCCeeeecC
Confidence            9999999999999876 458999999999999999999999999999999999999999999999     8999999999


Q ss_pred             CCChHHHHHHHHHHhCCCeEEEEecCC-c----HHHHHhcCCCEEEeCCCCCc-ccc-cCCCCCcccEEEeCCCCCcccc
Q 020314          162 ASGAVGLYAVQLAKLGNTHVTATCGAR-N----IELVKSLGADEVLDYKTPDG-AAL-KSPSGRKYDAVINCVTGIPWST  234 (327)
Q Consensus       162 ~~g~~G~~~~~la~~~g~~v~~~~~~~-~----~~~~~~lg~~~v~~~~~~~~-~~~-~~~~~~~~d~v~d~~g~~~~~~  234 (327)
                      |.+++|++.+|+|+++|++-+-++|++ .    .+.++.+|+++|+..++... +.. .......+.+.|||+|+.....
T Consensus       169 anS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~  248 (354)
T KOG0025|consen  169 ANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATE  248 (354)
T ss_pred             cccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHH
Confidence            999999999999999999888888542 2    34567899999986544331 111 1123456899999999999889


Q ss_pred             cccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC-C-----CH----HHHHHHHHHHHCCceeEecceeecc
Q 020314          235 FEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS-P-----KG----ENLDFLVKLVKEGKLKTVIDSKHSL  304 (327)
Q Consensus       235 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~----~~~~~~~~~~~~g~l~~~~~~~~~~  304 (327)
                      ..+.|.++|.++.+|..+..+.......+.|+.+.++|++.. +     ++    +.+.++.++++.|+|..+..+..++
T Consensus       249 iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L  328 (354)
T KOG0025|consen  249 IARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPL  328 (354)
T ss_pred             HHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeec
Confidence            999999999999999998888888888999999999998652 1     12    3457888999999999988889999


Q ss_pred             ccHHHHHHHHhcCCC-CccEEEe
Q 020314          305 SKAEDAWAKSISGRA-TGKIIVE  326 (327)
Q Consensus       305 ~~~~~a~~~~~~~~~-~gkvvv~  326 (327)
                      ++-+.|++....... .||.++.
T Consensus       329 ~~~~tald~~L~~~~~~~Kq~i~  351 (354)
T KOG0025|consen  329 ADHKTALDAALSKFGKSGKQIIV  351 (354)
T ss_pred             hhhhHHHHHHHHHhccCCceEEE
Confidence            999988886654433 3566553

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=8.3e-43  Score=316.57  Aligned_cols=312  Identities=20%  Similarity=0.270  Sum_probs=243.2

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHH-hcCCCCCCC---CCCCeeecccceEEEEe
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQ-KGMLRPFLP---RKFPFIPASDVAGEVIG   80 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~-~g~~~~~~~---~~~p~~~G~e~~G~V~~   80 (327)
                      |+||+++++++++    +++++.+.|++.++||+|||.++|+|++|++.+ .|...+..+   ..+|.++|||++|+|++
T Consensus         1 m~~~a~~~~~~~~----l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~   76 (410)
T cd08238           1 MKTKAWRMYGKGD----LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILK   76 (410)
T ss_pred             CCcEEEEEEcCCc----eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEE
Confidence            5689999987654    999999999999999999999999999999976 454211100   14688999999999999


Q ss_pred             cCCCCC-CCCCCCEEEEEc----------------cCcccceeEeecCC----ceeeCCCCCChhhhcccCc-hH-HHHH
Q 020314           81 LGSEVK-NFKVGDKVVAVL----------------SGGGLAEFAVAKES----LTVARPQEVSAAEGAGIPC-AG-LTAH  137 (327)
Q Consensus        81 vG~~~~-~~~~Gd~V~~~~----------------~~g~~a~~~~~~~~----~~~~ip~~~~~~~aa~~~~-~~-~ta~  137 (327)
                      +|++++ ++++||||+..+                .+|+|+||++++++    .++++|+++++++++.+.. +. .+++
T Consensus        77 vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~  156 (410)
T cd08238          77 VGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAY  156 (410)
T ss_pred             eCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHh
Confidence            999998 699999998742                25999999999987    6899999999999886522 11 1234


Q ss_pred             HHH--------HHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC---eEEEEec-CCcHHHHHhc--------C
Q 020314          138 QAL--------TQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT---HVTATCG-ARNIELVKSL--------G  197 (327)
Q Consensus       138 ~al--------~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~---~v~~~~~-~~~~~~~~~l--------g  197 (327)
                      .++        .+..++     ++|++|+|+|++|++|++++|+|+++|+   +|+++++ ++|++.++++        |
T Consensus       157 ~a~~~~~~~~~~~~~~~-----~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~G  231 (410)
T cd08238         157 TANYHLQPGEYRHRMGI-----KPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRG  231 (410)
T ss_pred             hhcccccccchhhhcCC-----CCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccC
Confidence            332        234556     8899999999999999999999999764   7888874 4788888887        6


Q ss_pred             CC-EEEeCCC-CC--cccccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCC-ch-hHHHHhhhhccccceee
Q 020314          198 AD-EVLDYKT-PD--GAALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPS-PR-VLLTFAWKKLTFSKKQL  270 (327)
Q Consensus       198 ~~-~v~~~~~-~~--~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~-~~-~~~~~~~~~~~~~~~~~  270 (327)
                      ++ .++++.+ .+  ..+.+.+.++++|++||++|. ..+..++++++++|+++.++.. .. ....+....+.++++++
T Consensus       232 a~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i  311 (410)
T cd08238         232 IELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHY  311 (410)
T ss_pred             ceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEE
Confidence            66 4666543 22  223344566789999999985 4488999999999988776432 11 11234445667788888


Q ss_pred             EEEEeCCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          271 VPFSVSPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .+. .....++++++++++++|++++  +++++|+++|+++|++.+. ++..||+|+.+
T Consensus       312 ~g~-~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~  368 (410)
T cd08238         312 VGT-SGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT  368 (410)
T ss_pred             EEe-CCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence            873 3456678999999999999886  7889999999999999999 77789999864

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=8.2e-43  Score=309.40  Aligned_cols=299  Identities=16%  Similarity=0.164  Sum_probs=230.7

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCC-CCCCCeeecccceEEEEecCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFL-PRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~-~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      |..|+++++++++    +++++.+.|. .++||+|||.++|||++|++++.|.+.+.. ...+|.++|||++|+|+++|.
T Consensus         1 ~~~~~~~~~~~~~----~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~   75 (341)
T cd08237           1 MINQVYRLVRPKF----FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPT   75 (341)
T ss_pred             CcccceEEeccce----EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCC
Confidence            3568899987654    9999999985 999999999999999999999998753211 125799999999999999876


Q ss_pred             CCCCCCCCCEEEEEc------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           84 EVKNFKVGDKVVAVL------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      +  .|++||||+..+                        .+|+|+||+++++++++++|+++++++|+.+ .+++++|++
T Consensus        76 ~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a  152 (341)
T cd08237          76 G--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHA  152 (341)
T ss_pred             C--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHH
Confidence            4  799999998642                        2488999999999999999999999887755 477899999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHh-CC-CeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL-GN-THVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPS  216 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~-~g-~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  216 (327)
                      +.+..+.   ..++|++|||.| +|++|++++|++++ .| .+|+++++ ++|++.++..+++..++.         ...
T Consensus       153 ~~~~~~~---~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~---------~~~  219 (341)
T cd08237         153 ISRFEQI---AHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD---------IPE  219 (341)
T ss_pred             HHHHhhc---CCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh---------hhh
Confidence            8553322   117899999999 69999999999986 55 48888874 578888887666543321         011


Q ss_pred             CCcccEEEeCCCCC----cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC
Q 020314          217 GRKYDAVINCVTGI----PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG  292 (327)
Q Consensus       217 ~~~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  292 (327)
                      ..++|++||++|++    .+..++++++++|+++.+|.... ...+....+..+++++.+.. ....+++++++++++++
T Consensus       220 ~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~-~~~~~~~~~~~~~~~~~  297 (341)
T cd08237         220 DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY-PVPINTRMVLEKGLTLVGSS-RSTREDFERAVELLSRN  297 (341)
T ss_pred             ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC-CcccCHHHHhhCceEEEEec-ccCHHHHHHHHHHHHhC
Confidence            23699999999953    37889999999999999986432 22334445667888888743 34567899999999998


Q ss_pred             -----ceeEecceeeccc---cHHHHHHHHhcCCCCccEEEeC
Q 020314          293 -----KLKTVIDSKHSLS---KAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       293 -----~l~~~~~~~~~~~---~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                           .++++++++|+++   ++.++++.+.++ ..||+|+++
T Consensus       298 ~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~  339 (341)
T cd08237         298 PEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW  339 (341)
T ss_pred             CcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence                 4777888999986   455555555444 679999864

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=2e-42  Score=306.35  Aligned_cols=305  Identities=24%  Similarity=0.261  Sum_probs=246.2

Q ss_pred             ceEEEEEecc--CC-CccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            6 VMHAVQYDSY--GG-GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         6 ~~~a~~~~~~--g~-~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      +||+|++.++  |. +++.+++++.+.|+|.++||+|||.++|||+.|.+....      ...+|.++|+|++|+|++  
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~------~~~~p~v~G~e~~G~V~~--   73 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR------LNEGDTMIGTQVAKVIES--   73 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc------CCCCCcEecceEEEEEec--
Confidence            6999999993  44 348899999999999999999999999999987653211      114578999999999985  


Q ss_pred             CCCCCCCCCCEEEEEccCcccceeEeecCC---ceeeCCCCCC-----hhhhcccCchHHHHHHHHHHhhCCccCCCCCC
Q 020314           83 SEVKNFKVGDKVVAVLSGGGLAEFAVAKES---LTVARPQEVS-----AAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQ  154 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~---~~~~ip~~~~-----~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~  154 (327)
                       .++++++||||++.   ++|++|.+++.+   .++++|++++     ...+++++.++.|||+++.+..++     ++|
T Consensus        74 -~~~~~~~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~-----~~g  144 (329)
T cd08294          74 -KNSKFPVGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKP-----KAG  144 (329)
T ss_pred             -CCCCCCCCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCC-----CCC
Confidence             45689999999984   589999999999   9999999988     233356788999999999888888     899


Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCCCcc
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTGIPW  232 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~~~  232 (327)
                      ++|||+|++|++|++++|+|+.+|++|+++++ +++.+.++++|++.++++.+.+. +.++...++++|++||++|++.+
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~~~  224 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEFS  224 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHHHH
Confidence            99999999999999999999999999998885 47888999999999999876552 22222233689999999999778


Q ss_pred             cccccccCCCcEEEeecCCchh----H--HHHhhhhccccceeeEEEEeCC----CHHHHHHHHHHHHCCceeEecceee
Q 020314          233 STFEPNLGTTGKVIDFNPSPRV----L--LTFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKLKTVIDSKH  302 (327)
Q Consensus       233 ~~~~~~l~~~G~~v~~g~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~  302 (327)
                      ..++++++++|+++.+|.....    .  .......+.++++++.++....    ..+.++++++++++|++++.+...|
T Consensus       225 ~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~  304 (329)
T cd08294         225 STVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTE  304 (329)
T ss_pred             HHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCccccc
Confidence            9999999999999998743210    0  0112334566777777643321    1345778999999999987666779


Q ss_pred             ccccHHHHHHHHhcCCCCccEEEeC
Q 020314          303 SLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       303 ~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++++|++.+.+++..||+|+++
T Consensus       305 ~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         305 GFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             CHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            9999999999999999999999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=2.9e-42  Score=307.86  Aligned_cols=306  Identities=25%  Similarity=0.325  Sum_probs=251.4

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCC--------CCCCCCeeecccceEEE
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF--------LPRKFPFIPASDVAGEV   78 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~--------~~~~~p~~~G~e~~G~V   78 (327)
                      ||||++.++++    +++++.+.|++.++||+||+.++++|++|++...+.....        ....+|.++|||++|+|
T Consensus         1 mka~~~~~~~~----l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   76 (351)
T cd08233           1 MKAARYHGRKD----IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVV   76 (351)
T ss_pred             CceEEEecCCc----eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEE
Confidence            79999987554    8999999999999999999999999999998765431100        11236889999999999


Q ss_pred             EecCCCCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314           79 IGLGSEVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP  130 (327)
Q Consensus        79 ~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~  130 (327)
                      +++|++++++++||+|++..                            .+|+|++|+.++.+.++++|+++++++++.+ 
T Consensus        77 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-  155 (351)
T cd08233          77 VEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-  155 (351)
T ss_pred             EEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-
Confidence            99999999999999998632                            1589999999999999999999999998766 


Q ss_pred             chHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCCCC
Q 020314          131 CAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKTPD  208 (327)
Q Consensus       131 ~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~  208 (327)
                      .++.+||+++ ...++     +++++|+|+| +|++|++++|+|+.+|+ +|+++++ +++.++++++|++.++++.+.+
T Consensus       156 ~~~~ta~~~l-~~~~~-----~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~  228 (351)
T cd08233         156 EPLAVAWHAV-RRSGF-----KPGDTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVD  228 (351)
T ss_pred             cHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccC
Confidence            6778999999 77777     8999999998 69999999999999999 7888874 4678888899999999887655


Q ss_pred             --cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHH
Q 020314          209 --GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFL  285 (327)
Q Consensus       209 --~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
                        ..+.+.+.++++|++||++|+. .+..++++++++|+++.+|.... ...+....+..+++++.+.. ....++++++
T Consensus       229 ~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~-~~~~~~~~~~  306 (351)
T cd08233         229 VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK-PISFNPNDLVLKEKTLTGSI-CYTREDFEEV  306 (351)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC-CCccCHHHHHhhCcEEEEEe-ccCcchHHHH
Confidence              2234455666799999999854 58889999999999999986542 23344455566777777743 3346789999


Q ss_pred             HHHHHCCcee--EecceeeccccH-HHHHHHHhcCCCC-ccEEEe
Q 020314          286 VKLVKEGKLK--TVIDSKHSLSKA-EDAWAKSISGRAT-GKIIVE  326 (327)
Q Consensus       286 ~~~~~~g~l~--~~~~~~~~~~~~-~~a~~~~~~~~~~-gkvvv~  326 (327)
                      ++++++++++  +.+.++|+++|+ ++|++.+.+++.. ||+|+.
T Consensus       307 ~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         307 IDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             HHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999999995  467789999996 7899999999875 999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=3.7e-42  Score=305.49  Aligned_cols=309  Identities=25%  Similarity=0.284  Sum_probs=245.2

Q ss_pred             eEEEEEeccCCCccceEEeeccC----CCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccc--eEEEEe
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPV----PTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDV--AGEVIG   80 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~----~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~   80 (327)
                      +|+|...  ++++++|++++.++    |+|.++||||||+++|||+.|++...|.+..  ...+|.++|++.  .|++..
T Consensus         8 ~~~~~~~--~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~   83 (338)
T cd08295           8 LKAYVTG--FPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKV   83 (338)
T ss_pred             EecCCCC--CCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEE
Confidence            5566642  33467899999888    7799999999999999999999999885431  114577888754  455556


Q ss_pred             cCCCCCCCCCCCEEEEEccCcccceeEeecC-CceeeCC-CCCChh-hhcccCchHHHHHHHHHHhhCCccCCCCCCCeE
Q 020314           81 LGSEVKNFKVGDKVVAVLSGGGLAEFAVAKE-SLTVARP-QEVSAA-EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNI  157 (327)
Q Consensus        81 vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~-~~~~~ip-~~~~~~-~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~v  157 (327)
                      +|++++++++||+|+++   |+|+||+++++ ..++++| +++++. +++.+++++.|||+++.+..++     ++|++|
T Consensus        84 v~~~v~~~~vGd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~-----~~g~~V  155 (338)
T cd08295          84 VDSGNPDFKVGDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKP-----KKGETV  155 (338)
T ss_pred             EecCCCCCCCCCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCC-----CCCCEE
Confidence            77888899999999975   69999999999 7999995 678876 7999999999999999877888     899999


Q ss_pred             EEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHh-cCCCEEEeCCCC-C-cccccCCCCCcccEEEeCCCCCccc
Q 020314          158 LITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKS-LGADEVLDYKTP-D-GAALKSPSGRKYDAVINCVTGIPWS  233 (327)
Q Consensus       158 lV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~-lg~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g~~~~~  233 (327)
                      ||+|++|++|++++|+|+.+|++|+++++ +++.+.+++ +|++.++++.+. + .+.+....++++|++||++|+..+.
T Consensus       156 lI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~  235 (338)
T cd08295         156 FVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLD  235 (338)
T ss_pred             EEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHH
Confidence            99999999999999999999999998885 467888887 999999986543 3 2222222236899999999987789


Q ss_pred             ccccccCCCcEEEeecCCchhHH-----HHhhhhccccceeeEEEEeCCC----HHHHHHHHHHHHCCceeEecceeecc
Q 020314          234 TFEPNLGTTGKVIDFNPSPRVLL-----TFAWKKLTFSKKQLVPFSVSPK----GENLDFLVKLVKEGKLKTVIDSKHSL  304 (327)
Q Consensus       234 ~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~  304 (327)
                      .++++++++|+++.+|.......     ......+.+++.++.++.....    .+.++++++++.+|++++.+...|++
T Consensus       236 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l  315 (338)
T cd08295         236 AVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGL  315 (338)
T ss_pred             HHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCH
Confidence            99999999999999985432111     1122345566666666433221    34578899999999998877677999


Q ss_pred             ccHHHHHHHHhcCCCCccEEEeC
Q 020314          305 SKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       305 ~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++|++.+++++..||+|+++
T Consensus       316 ~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         316 ESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHHHHHhcCCCCceEEEEC
Confidence            99999999999999999999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=4.9e-42  Score=305.77  Aligned_cols=302  Identities=19%  Similarity=0.244  Sum_probs=246.2

Q ss_pred             EEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCC
Q 020314           10 VQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFK   89 (327)
Q Consensus        10 ~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   89 (327)
                      |++.+++++   +++++.+.|.+.++||+||+.++|+|++|++.+.+.+.+  ...+|.++|||++|+|+++|++++.+ 
T Consensus         2 ~~~~~~g~~---~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~-   75 (349)
T TIGR03201         2 WMMTEPGKP---MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT--NHALPLALGHEISGRVIQAGAGAASW-   75 (349)
T ss_pred             ceEecCCCC---ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCc--cCCCCeeccccceEEEEEeCCCcCCC-
Confidence            567777654   888999999999999999999999999999987544321  12568999999999999999999887 


Q ss_pred             CCCEEEEEc---------------------------cCcccceeEeecCCceeeCCC------CCChhhhcccCchHHHH
Q 020314           90 VGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQ------EVSAAEGAGIPCAGLTA  136 (327)
Q Consensus        90 ~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~------~~~~~~aa~~~~~~~ta  136 (327)
                      +||||+...                           .+|+|++|+.++++.++++|+      ++++++++.+++++.++
T Consensus        76 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta  155 (349)
T TIGR03201        76 IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP  155 (349)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence            999998621                           258999999999999999999      89999999999999999


Q ss_pred             HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC-----cc
Q 020314          137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD-----GA  210 (327)
Q Consensus       137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~-----~~  210 (327)
                      |+++. ..++     +++++|+|+|+ |++|++++++|++.|++|+++++ ++|++.++++|++.++++.+.+     ..
T Consensus       156 ~~a~~-~~~~-----~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~  228 (349)
T TIGR03201       156 YQAAV-QAGL-----KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKL  228 (349)
T ss_pred             HHHHH-hcCC-----CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHH
Confidence            99985 4666     88999999997 99999999999999999988874 5788899999999998876542     12


Q ss_pred             cccCCCCCccc----EEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHH
Q 020314          211 ALKSPSGRKYD----AVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFL  285 (327)
Q Consensus       211 ~~~~~~~~~~d----~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
                      +.+.+.++++|    ++|||+|+.. +..++++++++|+++.+|..... ..+....+..+..++.+.+ ....++++++
T Consensus       229 ~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~  306 (349)
T TIGR03201       229 IKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK-TEYRLSNLMAFHARALGNW-GCPPDRYPAA  306 (349)
T ss_pred             HHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC-cccCHHHHhhcccEEEEEe-cCCHHHHHHH
Confidence            33345666776    8999999765 77889999999999999965432 2223334444555666633 3356789999


Q ss_pred             HHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          286 VKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       286 ~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++++|++++  ++ +.|+++|+++||+.+++++..||+++++
T Consensus       307 ~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       307 LDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             HHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence            99999999864  44 4799999999999999999899999864

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=4.6e-42  Score=303.38  Aligned_cols=302  Identities=23%  Similarity=0.248  Sum_probs=243.6

Q ss_pred             EEEEEeccC---CCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            8 HAVQYDSYG---GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         8 ~a~~~~~~g---~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      |.|++.+..   ..++.+++++.+.|+|.+|||+|||.++|+|+.|+.   |.++.   ...|.++|+|++|+|+++|+ 
T Consensus         2 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~---~~~~~i~G~~~~g~v~~~~~-   74 (325)
T TIGR02825         2 KTWTLKKHFVGYPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRL---KEGDTMMGQQVARVVESKNV-   74 (325)
T ss_pred             cEEEEecCCCCCCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcC---CCCCcEecceEEEEEEeCCC-
Confidence            556776532   236779999999999999999999999999996543   33321   13478999999999999763 


Q ss_pred             CCCCCCCCEEEEEccCcccceeEeecCCceeeC----CCCCChhhh-cccCchHHHHHHHHHHhhCCccCCCCCCCeEEE
Q 020314           85 VKNFKVGDKVVAVLSGGGLAEFAVAKESLTVAR----PQEVSAAEG-AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI  159 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~i----p~~~~~~~a-a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV  159 (327)
                        ++++||||+++   ++|++|..++.+.+.++    |++++++++ +++++++.|||+++.+..++     ++|++|||
T Consensus        75 --~~~~GdrV~~~---~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~-----~~g~~VLI  144 (325)
T TIGR02825        75 --ALPKGTIVLAS---PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGV-----KGGETVMV  144 (325)
T ss_pred             --CCCCCCEEEEe---cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCC-----CCCCEEEE
Confidence              69999999985   47999999999888777    899999987 68899999999999888888     89999999


Q ss_pred             EcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCC-C-cccccCCCCCcccEEEeCCCCCcccccc
Q 020314          160 TAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTP-D-GAALKSPSGRKYDAVINCVTGIPWSTFE  236 (327)
Q Consensus       160 ~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~  236 (327)
                      +|++|++|++++|+|+..|++|+++++ +++.+.++++|++.++++++. + .+..+...++++|++||++|++.+..++
T Consensus       145 ~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~  224 (325)
T TIGR02825       145 NAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVI  224 (325)
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHH
Confidence            999999999999999999999998885 478888899999999998764 3 2333333456899999999988889999


Q ss_pred             cccCCCcEEEeecCCchh----HHH--HhhhhccccceeeEEEEeC-C----CHHHHHHHHHHHHCCceeEecceeeccc
Q 020314          237 PNLGTTGKVIDFNPSPRV----LLT--FAWKKLTFSKKQLVPFSVS-P----KGENLDFLVKLVKEGKLKTVIDSKHSLS  305 (327)
Q Consensus       237 ~~l~~~G~~v~~g~~~~~----~~~--~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~  305 (327)
                      ++++++|+++.+|.....    ...  .....+.++.+++.++... .    ..+.++++++++++|++++.+...|+++
T Consensus       225 ~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~  304 (325)
T TIGR02825       225 GQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFE  304 (325)
T ss_pred             HHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHH
Confidence            999999999999854321    011  1233455667777665421 1    2457889999999999988776789999


Q ss_pred             cHHHHHHHHhcCCCCccEEEe
Q 020314          306 KAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       306 ~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      ++++|++.+++++..||+|++
T Consensus       305 ~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       305 NMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HHHHHHHHHhcCCCCCeEEeC
Confidence            999999999999999999974

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=6.3e-42  Score=305.08  Aligned_cols=313  Identities=21%  Similarity=0.214  Sum_probs=236.5

Q ss_pred             eEEEEEeccC-----CCccceEEeeccCCCCC-CCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEe
Q 020314            7 MHAVQYDSYG-----GGVAGLKHVEVPVPTPN-KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG   80 (327)
Q Consensus         7 ~~a~~~~~~g-----~~~~~l~~~~~~~~~~~-~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   80 (327)
                      .|.+++.+..     ..++.+++++.+.|+|. ++||+|||.++|||+.|+..............+|.++|||++|+|++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~   82 (345)
T cd08293           3 NKRVVLNSRPGKNGNPVAENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVV   82 (345)
T ss_pred             ceEEEEecccCCCCCCCccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEE
Confidence            4667776533     12577999999999874 99999999999999999654322111000124678999999999999


Q ss_pred             cCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhh----hcccCchHHHHHHHHHHhhCCccCCCCCC--
Q 020314           81 LGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAE----GAGIPCAGLTAHQALTQSLGVKLDGSGQQ--  154 (327)
Q Consensus        81 vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~----aa~~~~~~~ta~~al~~~~~~~~~~~~~~--  154 (327)
                      +|++++++++||||++.  .++|++|++++++.++++|+++++++    +++++.++.|||+++.+..++     +++  
T Consensus        83 vG~~v~~~~~Gd~V~~~--~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~-----~~g~~  155 (345)
T cd08293          83 EESKHQKFAVGDIVTSF--NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHI-----TPGAN  155 (345)
T ss_pred             eccCCCCCCCCCEEEec--CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccC-----CCCCC
Confidence            99999999999999874  26899999999999999999864332    456778899999999777777     655  


Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHh-cCCCEEEeCCCCCc-c-cccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKS-LGADEVLDYKTPDG-A-ALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~-lg~~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~  229 (327)
                      ++|||+|++|++|++++|+|+++|+ +|++++++ ++.+.+++ +|++.++++.+.+. + +.+.+ ++++|++||++|+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~-~~gvd~vid~~g~  234 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELC-PEGVDVYFDNVGG  234 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHC-CCCceEEEECCCc
Confidence            9999999999999999999999999 89999854 67777765 99999998876552 2 33333 3689999999998


Q ss_pred             CcccccccccCCCcEEEeecCCchh--HH----HH--hhhhcc-ccceeeEEEEeCC----CHHHHHHHHHHHHCCceeE
Q 020314          230 IPWSTFEPNLGTTGKVIDFNPSPRV--LL----TF--AWKKLT-FSKKQLVPFSVSP----KGENLDFLVKLVKEGKLKT  296 (327)
Q Consensus       230 ~~~~~~~~~l~~~G~~v~~g~~~~~--~~----~~--~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~  296 (327)
                      +.+..++++++++|+++.+|.....  ..    ..  ....+. .+......+....    ..+.++.++++++++.+++
T Consensus       235 ~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~  314 (345)
T cd08293         235 EISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKV  314 (345)
T ss_pred             HHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccc
Confidence            8788999999999999998842210  00    00  000011 1122221211111    1345778889999999987


Q ss_pred             ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          297 VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       297 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .....++++++++|++.+.+++..||+|+++
T Consensus       315 ~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         315 KETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             eeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            6556679999999999999999899999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=7.1e-42  Score=309.65  Aligned_cols=318  Identities=26%  Similarity=0.288  Sum_probs=257.6

Q ss_pred             CccceEEEEEe--ccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCC-C-----CCC-CCCeeeccc
Q 020314            3 GKAVMHAVQYD--SYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP-F-----LPR-KFPFIPASD   73 (327)
Q Consensus         3 ~~~~~~a~~~~--~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~-----~~~-~~p~~~G~e   73 (327)
                      +|.+|||+++.  ++|.+.+.+++++.+.|++.++||+||+.++|+|++|++...|.... +     .+. ..+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            68999999986  34543456899999999999999999999999999999987775210 0     000 123588999


Q ss_pred             ceEEEEecCCCCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhh
Q 020314           74 VAGEVIGLGSEVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAE  125 (327)
Q Consensus        74 ~~G~V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~  125 (327)
                      ++|+|+++|++++.+++||+|++.+                            .+|+|++|++++...++++|+++++++
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~  168 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE  168 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence            9999999999999999999998864                            248999999999999999999999999


Q ss_pred             hcccCchHHHHHHHHHHh--hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEE
Q 020314          126 GAGIPCAGLTAHQALTQS--LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVL  202 (327)
Q Consensus       126 aa~~~~~~~ta~~al~~~--~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~  202 (327)
                      ++.+++++.|||+++...  +++     +++++|+|+|++|++|++++++|+++|++++++++ +++.+.++++|++.++
T Consensus       169 aa~l~~~~~tA~~al~~~~~~~~-----~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i  243 (393)
T cd08246         169 AAAYMLVGATAYRMLFGWNPNTV-----KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVI  243 (393)
T ss_pred             HhhhcccHHHHHHHHhhcccccC-----CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEE
Confidence            999999999999998654  566     78999999998899999999999999999888775 4788888999999988


Q ss_pred             eCCCCC------------------------cccccCCCCC-cccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHH
Q 020314          203 DYKTPD------------------------GAALKSPSGR-KYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLT  257 (327)
Q Consensus       203 ~~~~~~------------------------~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  257 (327)
                      ++++.+                        ..+.+.++++ ++|++||++|+..+..++++++++|+++.+|........
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  323 (393)
T cd08246         244 NRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHT  323 (393)
T ss_pred             cccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCC
Confidence            864421                        1122345555 899999999987788999999999999999854322122


Q ss_pred             HhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcC-CCCccEEEe
Q 020314          258 FAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISG-RATGKIIVE  326 (327)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~  326 (327)
                      +....+..++.++.+. .....+.++.++++++++.+.+.+.+.|++++++++++.+.++ +..||+++-
T Consensus       324 ~~~~~l~~~~~~i~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         324 YDNRYLWMRQKRIQGS-HFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             CcHHHHhhheeEEEec-ccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence            2333444566666653 3345678889999999999988777899999999999999998 788999863

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=2.1e-41  Score=303.48  Aligned_cols=306  Identities=24%  Similarity=0.320  Sum_probs=252.2

Q ss_pred             EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314            8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN   87 (327)
Q Consensus         8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   87 (327)
                      |++++.++++   .+++++.+.|.+.++||+||+.++++|++|++...|.++.   ..+|.++|||++|+|+++|+++++
T Consensus         2 ka~~~~~~~~---~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~   75 (361)
T cd08231           2 RAAVLTGPGK---PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTT   75 (361)
T ss_pred             eEEEEcCCCC---CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCccc
Confidence            7899998874   3999999999999999999999999999999999887641   257889999999999999999986


Q ss_pred             ------CCCCCEEEEEc----------------------------------cCcccceeEeecCC-ceeeCCCCCChhhh
Q 020314           88 ------FKVGDKVVAVL----------------------------------SGGGLAEFAVAKES-LTVARPQEVSAAEG  126 (327)
Q Consensus        88 ------~~~Gd~V~~~~----------------------------------~~g~~a~~~~~~~~-~~~~ip~~~~~~~a  126 (327)
                            +++||+|++..                                  ..|+|++|+.++++ .++++|++++..++
T Consensus        76 ~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~a  155 (361)
T cd08231          76 DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVA  155 (361)
T ss_pred             cccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHH
Confidence                  99999998862                                  25899999999996 79999999999999


Q ss_pred             cccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeC
Q 020314          127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDY  204 (327)
Q Consensus       127 a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~  204 (327)
                      +.+++++.|||+++.+....     +++++|||+| +|++|++++++|+.+|+ +|++++++ ++.++++++|++.++++
T Consensus       156 a~~~~~~~ta~~al~~~~~~-----~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~  229 (361)
T cd08231         156 APANCALATVLAALDRAGPV-----GAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDI  229 (361)
T ss_pred             HHhcCHHHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcC
Confidence            99989999999999766555     6899999997 79999999999999999 89888854 67788899999998887


Q ss_pred             CCCCc-----ccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCch-hHHHHhhhhccccceeeEEEEeCC
Q 020314          205 KTPDG-----AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPR-VLLTFAWKKLTFSKKQLVPFSVSP  277 (327)
Q Consensus       205 ~~~~~-----~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  277 (327)
                      +..+.     .+.+.++++++|++|||+|+. .+..++++++++|+++.+|.... ....+....+.+++..+.+.. ..
T Consensus       230 ~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  308 (361)
T cd08231         230 DELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVH-NY  308 (361)
T ss_pred             cccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcc-cC
Confidence            65431     244556677899999999864 48889999999999999986432 112233334566677666643 33


Q ss_pred             CHHHHHHHHHHHHCC--c--eeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          278 KGENLDFLVKLVKEG--K--LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       278 ~~~~~~~~~~~~~~g--~--l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .++.++++++++..+  .  +.+++.++|+++++++||+.+.+++. +|+|+.+
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         309 DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence            566788899999887  3  44577889999999999999988774 7999875

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=7.2e-42  Score=302.47  Aligned_cols=307  Identities=25%  Similarity=0.334  Sum_probs=242.0

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCe-eecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPF-IPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~~   85 (327)
                      |+++++...+..   .++++.+.|.+.|+||+|||.++|||++|++.++|..+..   ..|. ++|||++|+|+++| .+
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~---~~~~~i~GHE~~G~V~evG-~~   73 (350)
T COG1063           1 MKAAVVYVGGGD---VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV---PPGDIILGHEFVGEVVEVG-VV   73 (350)
T ss_pred             CceeEEEecCCc---cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC---CCCCcccCccceEEEEEec-cc
Confidence            567777665542   3366666666889999999999999999999999975422   3344 99999999999999 77


Q ss_pred             CCCCCCCEEEEEc--------------------------------cCcccceeEeecCCceee-CCCCCChhhhcccCch
Q 020314           86 KNFKVGDKVVAVL--------------------------------SGGGLAEFAVAKESLTVA-RPQEVSAAEGAGIPCA  132 (327)
Q Consensus        86 ~~~~~Gd~V~~~~--------------------------------~~g~~a~~~~~~~~~~~~-ip~~~~~~~aa~~~~~  132 (327)
                      +.+++||||+..+                                .+|+|+||+++|.++.++ +|+++ +.+++++..+
T Consensus        74 ~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~ep  152 (350)
T COG1063          74 RGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEP  152 (350)
T ss_pred             cCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcCh
Confidence            8899999998765                                258999999999765555 57888 6667777778


Q ss_pred             HHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHHh-cCCCEEEeCCCCC-
Q 020314          133 GLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVKS-LGADEVLDYKTPD-  208 (327)
Q Consensus       133 ~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~~-lg~~~v~~~~~~~-  208 (327)
                      +.++|++.......     +++.+|+|.| +|++|++++++++.+|+ +|++++ +++|++++++ .+++.+++...++ 
T Consensus       153 la~~~~~~a~~~~~-----~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~  226 (350)
T COG1063         153 LATAYHGHAERAAV-----RPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDA  226 (350)
T ss_pred             hhhhhhhhhhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccH
Confidence            88998775445444     5556999999 89999999999999998 677776 4589999988 6666666554433 


Q ss_pred             -cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHH
Q 020314          209 -GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLV  286 (327)
Q Consensus       209 -~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (327)
                       ....+.+.+.++|++|||+|... +..++++++++|+++.+|........+....+..+++++.+.........++.++
T Consensus       227 ~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~  306 (350)
T COG1063         227 GAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERAL  306 (350)
T ss_pred             HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHH
Confidence             23456677789999999999655 8899999999999999997654422445567778888888853345667899999


Q ss_pred             HHHHCCceeE--ecceeeccccHHHHHHHHhcCCC-CccEEEeC
Q 020314          287 KLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRA-TGKIIVEP  327 (327)
Q Consensus       287 ~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~  327 (327)
                      +++++|++++  ++++.+++++++++++.+.+.+. ..|+++.+
T Consensus       307 ~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         307 DLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             HHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            9999999864  66788999999999999998655 55888864

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.1e-41  Score=299.89  Aligned_cols=313  Identities=30%  Similarity=0.433  Sum_probs=255.8

Q ss_pred             eEEEEEeccCCCccceEEee-ccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCC-----------------CCCCCCCe
Q 020314            7 MHAVQYDSYGGGVAGLKHVE-VPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP-----------------FLPRKFPF   68 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~-~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-----------------~~~~~~p~   68 (327)
                      ||++++...+. ++.+.+.+ .+.|.+.+++|+||+.++++|++|++...|.++.                 .....+|.
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~   79 (350)
T cd08274           1 MRAVLLTGHGG-LDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPR   79 (350)
T ss_pred             CeEEEEeccCC-ccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCc
Confidence            68999987765 45566654 4677789999999999999999999988876431                 01235688


Q ss_pred             eecccceEEEEecCCCCCCCCCCCEEEEEc-------------------cCcccceeEeecCCceeeCCCCCChhhhccc
Q 020314           69 IPASDVAGEVIGLGSEVKNFKVGDKVVAVL-------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGI  129 (327)
Q Consensus        69 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~  129 (327)
                      ++|||++|+|+++|++++++++||||++.+                   .+|++++|+.++...++++|+++++.+++.+
T Consensus        80 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l  159 (350)
T cd08274          80 IQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATF  159 (350)
T ss_pred             ccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhc
Confidence            999999999999999999999999998742                   2489999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCc
Q 020314          130 PCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDG  209 (327)
Q Consensus       130 ~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~  209 (327)
                      ++++.|||+++ ...++     +++++|||+|++|++|++++++|+++|+++++++++++++.++++|++.+++......
T Consensus       160 ~~~~~ta~~~~-~~~~~-----~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~  233 (350)
T cd08274         160 PCSYSTAENML-ERAGV-----GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLL  233 (350)
T ss_pred             ccHHHHHHHHH-hhcCC-----CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCccH
Confidence            99999999998 67777     8999999999889999999999999999999888666788888999876665443332


Q ss_pred             ccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHH
Q 020314          210 AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLV  289 (327)
Q Consensus       210 ~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (327)
                      .....+.++++|++||++|++.+..++++++++|+++.+|........+....+..++..+.+.. ....+.++++++++
T Consensus       234 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~  312 (350)
T cd08274         234 ADAKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGST-LGTREVFRRLVRYI  312 (350)
T ss_pred             HHHHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEee-cCCHHHHHHHHHHH
Confidence            11445567789999999998888999999999999999985422212223333345555665533 34567899999999


Q ss_pred             HCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          290 KEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       290 ~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++++.+.+.|++++++++++.+.++...||+++.+
T Consensus       313 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         313 EEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             HCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            99999887788999999999999999988889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=5.1e-41  Score=293.04  Aligned_cols=317  Identities=38%  Similarity=0.518  Sum_probs=253.9

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCC-CCCCCeee---cccceEEEEe
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFL-PRKFPFIP---ASDVAGEVIG   80 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~-~~~~p~~~---G~e~~G~V~~   80 (327)
                      ++++.+.+..+.++.+....++.++|.|.+++++|++.++++|+.|+.++.|.+.+.. ...+|.+.   |.+.+|.+..
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~   82 (347)
T KOG1198|consen    3 KKIRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVES   82 (347)
T ss_pred             cccceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEec
Confidence            3455666666655566777788999999999999999999999999999999876432 12567444   4444455566


Q ss_pred             cC-CCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhh------CCccCCCCC
Q 020314           81 LG-SEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSL------GVKLDGSGQ  153 (327)
Q Consensus        81 vG-~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~------~~~~~~~~~  153 (327)
                      .| ..+..+..||++......|+|+||.++|...++++|+++++++||.++.++.|||.++....      ++     ++
T Consensus        83 ~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~-----~~  157 (347)
T KOG1198|consen   83 VGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKL-----SK  157 (347)
T ss_pred             cccccccceEeeeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhcccccccccc-----CC
Confidence            66 44567889999888889999999999999999999999999999999999999999998888      77     89


Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCcHHHHHhcCCCEEEeCCCCCc-c-cccCCCCCcccEEEeCCCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGN-THVTATCGARNIELVKSLGADEVLDYKTPDG-A-ALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~-~~~~~~~~~~d~v~d~~g~~  230 (327)
                      |++|||+||+|++|++++|+|++.| ++|+++++.++.++++++|++.++|+++.+. + ..+.+ +.+||+||||+|+.
T Consensus       158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYT-GKGVDVVLDCVGGS  236 (347)
T ss_pred             CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCCccEEEECCCCC
Confidence            9999999999999999999999999 5788888899999999999999999999772 3 33444 78999999999998


Q ss_pred             cccccccccCCCcEEEeecCCchhHHHH------------hhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEec
Q 020314          231 PWSTFEPNLGTTGKVIDFNPSPRVLLTF------------AWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVI  298 (327)
Q Consensus       231 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~  298 (327)
                      .......++...|+...++.........            .......+.............+.++.+.++++.++|++.+
T Consensus       237 ~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i  316 (347)
T KOG1198|consen  237 TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVI  316 (347)
T ss_pred             ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCc
Confidence            8888888888888654443211100000            0111112222222223456788999999999999999999


Q ss_pred             ceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          299 DSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       299 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .+.||++++++|++.+.++...||+++++
T Consensus       317 ~~~~p~~~~~ea~~~~~~~~~~GK~vl~~  345 (347)
T KOG1198|consen  317 DSVYPFSQAKEAFEKLEKSHATGKVVLEK  345 (347)
T ss_pred             ceeeeHHHHHHHHHHHhhcCCcceEEEEe
Confidence            99999999999999999999999999864

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=4.4e-41  Score=304.60  Aligned_cols=319  Identities=24%  Similarity=0.264  Sum_probs=258.3

Q ss_pred             CccceEEEEEec--cCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCC-------CCCCCCC-eeecc
Q 020314            3 GKAVMHAVQYDS--YGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP-------FLPRKFP-FIPAS   72 (327)
Q Consensus         3 ~~~~~~a~~~~~--~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-------~~~~~~p-~~~G~   72 (327)
                      .|++||||++..  ++++++.+++.+.+.|.+.++||+||+.++++|..|.+...+....       +.+...| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            478899999965  7776678999999999999999999999999999998876664210       0011233 37999


Q ss_pred             cceEEEEecCCCCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChh
Q 020314           73 DVAGEVIGLGSEVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAA  124 (327)
Q Consensus        73 e~~G~V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~  124 (327)
                      |++|+|+++|++++.+++||+|++.+                            .+|+|++|+.++.+.++++|++++++
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~  163 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE  163 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence            99999999999999999999998854                            25899999999999999999999999


Q ss_pred             hhcccCchHHHHHHHHHH--hhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEE
Q 020314          125 EGAGIPCAGLTAHQALTQ--SLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEV  201 (327)
Q Consensus       125 ~aa~~~~~~~ta~~al~~--~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v  201 (327)
                      +++.+..++.+||+++..  ..++     .++++|+|+|++|++|++++++|+++|++++++++ +++.+.++++|++.+
T Consensus       164 ~aa~~~~~~~ta~~al~~~~~~~~-----~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~  238 (398)
T TIGR01751       164 EAACPGLTGATAYRQLVGWNPATV-----KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAV  238 (398)
T ss_pred             HHhhccchHHHHHHHHhhhhccCC-----CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEE
Confidence            999999999999999854  3556     78999999998899999999999999999887764 467888889999999


Q ss_pred             EeCCCCC------------------------cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHH
Q 020314          202 LDYKTPD------------------------GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLT  257 (327)
Q Consensus       202 ~~~~~~~------------------------~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  257 (327)
                      +|+++.+                        ..+.+.+.++++|++|||+|...+..++++++++|+++.+|........
T Consensus       239 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  318 (398)
T TIGR01751       239 IDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHD  318 (398)
T ss_pred             ecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCC
Confidence            9875421                        0122334557899999999987788999999999999999865432222


Q ss_pred             HhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          258 FAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +....+..++..+.+ +.....+++++++++++++++.+.+.+++++++++++++.+.++...||+|+.+
T Consensus       319 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  387 (398)
T TIGR01751       319 YDNRYLWMRQKRIQG-SHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLV  387 (398)
T ss_pred             cCHHHHhhcccEEEc-cccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEe
Confidence            223333445555555 223345567889999999999887888999999999999999999999999853

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=8e-41  Score=296.36  Aligned_cols=302  Identities=26%  Similarity=0.387  Sum_probs=251.8

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.+++..   +++++.+.|++.++||+||+.++++|++|++.+.|..+.   ..+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~   74 (333)
T cd08296           1 YKAVQVTEPGGP---LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVS   74 (333)
T ss_pred             CeEEEEccCCCC---ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCc
Confidence            799999887433   899999999999999999999999999999998886531   25678999999999999999999


Q ss_pred             CCCCCCEEEEE----------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           87 NFKVGDKVVAV----------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        87 ~~~~Gd~V~~~----------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      ++++||+|++.                            ..+|++++|+.++...++++|+++++.+++.+++++.++|+
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~  154 (333)
T cd08296          75 RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN  154 (333)
T ss_pred             cCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence            99999999862                            12589999999999999999999999999999999999999


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc-ccccCCC
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG-AALKSPS  216 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~  216 (327)
                      ++... ++     .++++|||+| +|++|++++++|+++|++++++++. ++++.++++|++.++++.+.+. ..+... 
T Consensus       155 ~~~~~-~~-----~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~-  226 (333)
T cd08296         155 ALRNS-GA-----KPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQEL-  226 (333)
T ss_pred             HHHhc-CC-----CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhc-
Confidence            98544 77     8899999999 8999999999999999999988854 6888889999999988766542 222222 


Q ss_pred             CCcccEEEeCCC-CCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          217 GRKYDAVINCVT-GIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       217 ~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                       +++|+++|++| +..+..++++++++|+++.+|.... ...+....+..++.++.+.. ......++.+++++++++++
T Consensus       227 -~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~l~  303 (333)
T cd08296         227 -GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE-PVAVSPLQLIMGRKSIHGWP-SGTALDSEDTLKFSALHGVR  303 (333)
T ss_pred             -CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC-CCCcCHHHHhhcccEEEEeC-cCCHHHHHHHHHHHHhCCCC
Confidence             36999999987 4558889999999999999986542 12233334446677777743 34567888999999999988


Q ss_pred             EecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          296 TVIDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       296 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      +.+ ..|+++++.+||+.+.+++..||+|++
T Consensus       304 ~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         304 PMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             ceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            765 589999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=5.8e-41  Score=298.47  Aligned_cols=315  Identities=27%  Similarity=0.341  Sum_probs=255.3

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCC-CeEEEEEeEEeeChhhHHHHhcCCCCCCC--CCCCeeecccceEEEEecCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNK-DEALLKVEAASINPIDWKLQKGMLRPFLP--RKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~-~eV~V~v~~~~i~~~d~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG~   83 (327)
                      ||||++.+++.+++.+.+++.+.|++.+ ++|+||+.++|+|+.|++...|..+...+  ...|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            7999999988766778999999998887 99999999999999999998887542110  12577899999999999999


Q ss_pred             CCCCCCCCCEEEEEc-cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcC
Q 020314           84 EVKNFKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAA  162 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~  162 (327)
                      +++.+++||+|++.. ..|+|++|..++.+.++++|+++++++++.+++.+.|+|+++....++     +++++|||+|+
T Consensus        81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~-----~~g~~vlI~g~  155 (341)
T cd08290          81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKL-----QPGDWVIQNGA  155 (341)
T ss_pred             CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhccc-----CCCCEEEEccc
Confidence            999999999999864 369999999999999999999999999999999999999999777777     89999999999


Q ss_pred             CChHHHHHHHHHHhCCCeEEEEecC-----CcHHHHHhcCCCEEEeCCCC---C-cc-cccCCCCCcccEEEeCCCCCcc
Q 020314          163 SGAVGLYAVQLAKLGNTHVTATCGA-----RNIELVKSLGADEVLDYKTP---D-GA-ALKSPSGRKYDAVINCVTGIPW  232 (327)
Q Consensus       163 ~g~~G~~~~~la~~~g~~v~~~~~~-----~~~~~~~~lg~~~v~~~~~~---~-~~-~~~~~~~~~~d~v~d~~g~~~~  232 (327)
                      +|++|++++++|++.|+++++++++     ++.+.++++|++.+++++..   + .. +.....+ ++|++|||+|+...
T Consensus       156 ~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~  234 (341)
T cd08290         156 NSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGKSA  234 (341)
T ss_pred             hhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcHhH
Confidence            9999999999999999999988854     45777788999999887654   3 12 2233444 79999999998777


Q ss_pred             cccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC-----CCH----HHHHHHHHHHHCCceeEecceee-
Q 020314          233 STFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS-----PKG----ENLDFLVKLVKEGKLKTVIDSKH-  302 (327)
Q Consensus       233 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~~g~l~~~~~~~~-  302 (327)
                      ...+++++++|+++.+|........+.......++..+.+....     .++    +.++.+++++..+.+.+.....+ 
T Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  314 (341)
T cd08290         235 TELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVT  314 (341)
T ss_pred             HHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccc
Confidence            78899999999999998432211122222233445555543321     112    35788899999999887666667 


Q ss_pred             --ccccHHHHHHHHhcCCCCccEEEeC
Q 020314          303 --SLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       303 --~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                        ++++++++++.+.++...||+|+++
T Consensus       315 ~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         315 DDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             cCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence              9999999999999999899999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=1.5e-40  Score=295.62  Aligned_cols=308  Identities=27%  Similarity=0.370  Sum_probs=253.0

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||++++++++++   +++.+.+.|++.+++|+||+.++++|++|++...|.++...+..+|.++|+|++|+|+++|+++.
T Consensus         1 ~ka~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~   77 (340)
T cd05284           1 MKAARLYEYGKP---LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVD   77 (340)
T ss_pred             CeeeEeccCCCC---ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCC
Confidence            699999987654   88888898899999999999999999999999888765323456789999999999999999999


Q ss_pred             CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      ++++||+|++..                           .+|+|++|+.++.++++++|+++++++++.++..+.|||++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~  157 (340)
T cd05284          78 GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA  157 (340)
T ss_pred             cCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence            999999998753                           25899999999999999999999999999999999999999


Q ss_pred             HHHh-hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEec-CCcHHHHHhcCCCEEEeCCCCC-cccccCC
Q 020314          140 LTQS-LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN-THVTATCG-ARNIELVKSLGADEVLDYKTPD-GAALKSP  215 (327)
Q Consensus       140 l~~~-~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~  215 (327)
                      +.+. ..+     .++++|||+| +|++|++++++|+..| ++|+++++ +++.+.++++|.+++++++... ..+.+..
T Consensus       158 l~~~~~~~-----~~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~  231 (340)
T cd05284         158 VKKALPYL-----DPGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELT  231 (340)
T ss_pred             HHHhcccC-----CCCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCccHHHHHHHHh
Confidence            9765 356     7899999999 6779999999999999 79998875 4677888899999988876542 1233345


Q ss_pred             CCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314          216 SGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL  294 (327)
Q Consensus       216 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  294 (327)
                      .+.++|+++|++|+ ..+..++++++++|+++.+|....  ..+.......++..+.+. .......++.++++++++.+
T Consensus       232 ~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~l  308 (340)
T cd05284         232 GGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGS-LWGTRAELVEVVALAESGKV  308 (340)
T ss_pred             CCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEE-ecccHHHHHHHHHHHHhCCC
Confidence            55689999999996 458889999999999999985542  111112223455555553 23356778899999999998


Q ss_pred             eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          295 KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       295 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++ ..+.|++++++++++.+.+++..||+++.|
T Consensus       309 ~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         309 KV-EITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             Cc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            75 446799999999999999999999999875

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.7e-40  Score=296.37  Aligned_cols=307  Identities=21%  Similarity=0.262  Sum_probs=249.0

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.++++    +++++.+.|.+.++||+||+.++++|++|++...+.++.   ..+|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~~~~----~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~   73 (351)
T cd08285           1 MKAFAMLGIGK----VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVK   73 (351)
T ss_pred             CceEEEccCCc----cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcC
Confidence            79999988764    788888888899999999999999999999988876532   35688999999999999999999


Q ss_pred             CCCCCCEEEEEc------------------------------cCcccceeEeecCC--ceeeCCCCCChhhhcccCchHH
Q 020314           87 NFKVGDKVVAVL------------------------------SGGGLAEFAVAKES--LTVARPQEVSAAEGAGIPCAGL  134 (327)
Q Consensus        87 ~~~~Gd~V~~~~------------------------------~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~  134 (327)
                      ++++||+|++..                              .+|+|++|+.++.+  .++++|+++++++++.++.++.
T Consensus        74 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~  153 (351)
T cd08285          74 DFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS  153 (351)
T ss_pred             ccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence            999999999742                              26899999999974  8999999999999999999999


Q ss_pred             HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cc
Q 020314          135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPD--GA  210 (327)
Q Consensus       135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~  210 (327)
                      |+|+++ ...++     +++++|||+| +|++|++++|+|+++|+ .+++++++ ++.++++++|++.++++...+  ..
T Consensus       154 ta~~~~-~~~~~-----~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~  226 (351)
T cd08285         154 TGFHGA-ELANI-----KLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQ  226 (351)
T ss_pred             hHHHHH-HccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHH
Confidence            999997 66677     8999999997 79999999999999999 57777654 678888999999998876554  22


Q ss_pred             cccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchh-HHHHh--hhhccccceeeEEEEeCCCHHHHHHHH
Q 020314          211 ALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRV-LLTFA--WKKLTFSKKQLVPFSVSPKGENLDFLV  286 (327)
Q Consensus       211 ~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (327)
                      +.....++++|+++|++|++ .+..++++++++|+++.+|..... ...+.  .....++..++.+......++++++++
T Consensus       227 i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  306 (351)
T cd08285         227 ILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLA  306 (351)
T ss_pred             HHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHH
Confidence            33445567899999999975 588999999999999999865431 11111  111223344444433333567899999


Q ss_pred             HHHHCCceeE---ecceeeccccHHHHHHHHhcCCC-CccEEEeC
Q 020314          287 KLVKEGKLKT---VIDSKHSLSKAEDAWAKSISGRA-TGKIIVEP  327 (327)
Q Consensus       287 ~~~~~g~l~~---~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~  327 (327)
                      +++++|++++   .+.+.|+++++++|++.+++++. .+|+++.+
T Consensus       307 ~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         307 SLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             HHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            9999999886   44456999999999999999875 68999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=7.1e-40  Score=289.42  Aligned_cols=314  Identities=25%  Similarity=0.351  Sum_probs=254.3

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++++++. ++.+++.+.+.|.+.+++|+||+.++++|+.|++...|..+.......|.++|||++|+|+++|++++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~   79 (324)
T cd08244           1 MRAIRLHEFGP-PEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD   79 (324)
T ss_pred             CeEEEEcCCCC-ccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence            68999987765 56678878777778999999999999999999999888653211235578899999999999999999


Q ss_pred             CCCCCCEEEEEc--cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCC
Q 020314           87 NFKVGDKVVAVL--SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASG  164 (327)
Q Consensus        87 ~~~~Gd~V~~~~--~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g  164 (327)
                      ++++||+|++..  ..|+|++|+.++...++++|+++++++++.+++.+.||| ++....++     +++++|+|+|++|
T Consensus        80 ~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~-----~~~~~vlI~g~~~  153 (324)
T cd08244          80 PAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATL-----TPGDVVLVTAAAG  153 (324)
T ss_pred             CCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCC-----CCCCEEEEEcCCc
Confidence            999999999853  279999999999999999999999999999999999995 55567777     8899999999999


Q ss_pred             hHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314          165 AVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT  241 (327)
Q Consensus       165 ~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~  241 (327)
                      ++|++++++|+.+|++++++++. ++.+.++++|++.++++.+.+  ..+.+...++++|+++|++|+.....+++++++
T Consensus       154 ~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~  233 (324)
T cd08244         154 GLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAP  233 (324)
T ss_pred             hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhcc
Confidence            99999999999999999998854 677788899998888876554  234445566789999999998888889999999


Q ss_pred             CcEEEeecCCchhHHHHhhhhccccceeeEEEEeCC-----CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhc
Q 020314          242 TGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP-----KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSIS  316 (327)
Q Consensus       242 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~  316 (327)
                      +|+++.+|........+.......++..+.+.....     ..+.+++++++++++.+.+.+...|++++++++++.+.+
T Consensus       234 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~  313 (324)
T cd08244         234 GGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEA  313 (324)
T ss_pred             CcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHc
Confidence            999999986432211111112223344444322211     245678889999999998777789999999999999999


Q ss_pred             CCCCccEEEeC
Q 020314          317 GRATGKIIVEP  327 (327)
Q Consensus       317 ~~~~gkvvv~~  327 (327)
                      +...||+++.|
T Consensus       314 ~~~~~kvv~~~  324 (324)
T cd08244         314 RSTVGKVLLLP  324 (324)
T ss_pred             CCCCceEEEeC
Confidence            99999999875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=4.2e-40  Score=292.34  Aligned_cols=316  Identities=28%  Similarity=0.383  Sum_probs=246.2

Q ss_pred             EEEEEeccC--CCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            8 HAVQYDSYG--GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         8 ~a~~~~~~g--~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      |||++.+++  ++++.++..+.+.|++.++||+||+.++++|+.|++...|..+.   ..+|.++|+|++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v   77 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE---AGQPKILGWDAAGVVVAVGDEV   77 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC---CCCCcccceeeEEEEEEeCCCC
Confidence            588888872  33788999999999999999999999999999999988876431   2467899999999999999999


Q ss_pred             CCCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcC
Q 020314           86 KNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAA  162 (327)
Q Consensus        86 ~~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~  162 (327)
                      +.+++||+|+++.   ..|+|++|++++++.++++|+++++++++.+++++.|||+++....+++....+++++|||+|+
T Consensus        78 ~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga  157 (336)
T TIGR02817        78 TLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGG  157 (336)
T ss_pred             CCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcC
Confidence            9999999999853   2689999999999999999999999999999999999999998887772100112899999999


Q ss_pred             CChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-Cccccccccc
Q 020314          163 SGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-IPWSTFEPNL  239 (327)
Q Consensus       163 ~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l  239 (327)
                      +|++|++++|+|+.+ |++|+++++ +++.+.++++|+++++++.......++...++++|+++|++++ .....+++++
T Consensus       158 ~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l  237 (336)
T TIGR02817       158 AGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELL  237 (336)
T ss_pred             CcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHh
Confidence            999999999999998 999999985 4678888999999998865422222222455689999999864 5588999999


Q ss_pred             CCCcEEEeecCCchhHH-HHhhhhccccceeeE-EEEe-CC----CHHHHHHHHHHHHCCceeEecceeec---cccHHH
Q 020314          240 GTTGKVIDFNPSPRVLL-TFAWKKLTFSKKQLV-PFSV-SP----KGENLDFLVKLVKEGKLKTVIDSKHS---LSKAED  309 (327)
Q Consensus       240 ~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~-~~~~-~~----~~~~~~~~~~~~~~g~l~~~~~~~~~---~~~~~~  309 (327)
                      +++|+++.++....... .+....+.+....+. .... ..    ....++++++++.++.+++.+.+.++   ++++++
T Consensus       238 ~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~  317 (336)
T TIGR02817       238 APQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKR  317 (336)
T ss_pred             ccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHH
Confidence            99999998864321111 111111222221111 0000 00    12567889999999999876665554   689999


Q ss_pred             HHHHHhcCCCCccEEEe
Q 020314          310 AWAKSISGRATGKIIVE  326 (327)
Q Consensus       310 a~~~~~~~~~~gkvvv~  326 (327)
                      |++.+.+++..||++++
T Consensus       318 a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       318 AHALIESGKARGKIVLE  334 (336)
T ss_pred             HHHHHHcCCccceEEEe
Confidence            99999999999999874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=5.4e-40  Score=294.29  Aligned_cols=307  Identities=25%  Similarity=0.282  Sum_probs=248.8

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      |+|||+++.+++++   +++++.+.|.+.++||+||+.++|+|++|++...|.++    ...|.++|||++|+|+++|++
T Consensus         1 ~~~~a~~~~~~~~~---~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~   73 (365)
T cd08278           1 MKTTAAVVREPGGP---FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSA   73 (365)
T ss_pred             CccEEeeeccCCCc---ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCC
Confidence            58999999987654   78899999999999999999999999999999988763    246789999999999999999


Q ss_pred             CCCCCCCCEEEEE-------------------------------------------------ccCcccceeEeecCCcee
Q 020314           85 VKNFKVGDKVVAV-------------------------------------------------LSGGGLAEFAVAKESLTV  115 (327)
Q Consensus        85 ~~~~~~Gd~V~~~-------------------------------------------------~~~g~~a~~~~~~~~~~~  115 (327)
                      +.++++||+|++.                                                 ...|+|++|+.+++++++
T Consensus        74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~  153 (365)
T cd08278          74 VTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVV  153 (365)
T ss_pred             cccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEE
Confidence            9999999999852                                                 124889999999999999


Q ss_pred             eCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHH
Q 020314          116 ARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELV  193 (327)
Q Consensus       116 ~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~  193 (327)
                      ++|+++++++++.+++++.||++++....++     +++++|||+| +|++|++++++|++.|+ +++++++ +++.+.+
T Consensus       154 ~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~-----~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~  227 (365)
T cd08278         154 KVDKDVPLELLAPLGCGIQTGAGAVLNVLKP-----RPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA  227 (365)
T ss_pred             ECCCCCCHHHhhhhcchhhhhhHHHhhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            9999999999999999999999998777777     8899999997 69999999999999999 5777764 4678888


Q ss_pred             HhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCc-hhHHHHhhhhcccccee
Q 020314          194 KSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKLTFSKKQ  269 (327)
Q Consensus       194 ~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~  269 (327)
                      +++|++.++++++.+  ..+.+.+ ++++|+++||+|+. .+..++++++++|+++.+|... .....+....+..++..
T Consensus       228 ~~~g~~~~i~~~~~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  306 (365)
T cd08278         228 KELGATHVINPKEEDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKT  306 (365)
T ss_pred             HHcCCcEEecCCCcCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCce
Confidence            999999998876654  2233344 67899999999864 4889999999999999998642 11122233333344555


Q ss_pred             eEEEEeC--CCHHHHHHHHHHHHCCceeE-ecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          270 LVPFSVS--PKGENLDFLVKLVKEGKLKT-VIDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       270 ~~~~~~~--~~~~~~~~~~~~~~~g~l~~-~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      +.++...  ...+.++++++++.+++++. .+...|++++++++++.+.+++.. |+++.
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         307 IRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             EEEeecCCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence            5543321  22567788999999999854 244579999999999999987765 77763

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=7.2e-40  Score=289.75  Aligned_cols=313  Identities=24%  Similarity=0.329  Sum_probs=253.4

Q ss_pred             ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      +||+|++.++|. ++.+++++.+.|.+.++||+||+.++|+|++|++...|.++.   ...|.++|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v   76 (327)
T PRK10754          1 MAKRIEFHKHGG-PEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGV   76 (327)
T ss_pred             CceEEEEeccCC-hhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCC
Confidence            589999998885 688999999999999999999999999999999998887641   2457889999999999999999


Q ss_pred             CCCCCCCEEEEEc-cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCC
Q 020314           86 KNFKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASG  164 (327)
Q Consensus        86 ~~~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g  164 (327)
                      +.+++||+|+... ..|+|++|+.++.+.++++|+++++++++.++..+.++|+++.+..++     .++++|+|+|++|
T Consensus        77 ~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~-----~~g~~vlI~g~~g  151 (327)
T PRK10754         77 KHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEI-----KPDEQFLFHAAAG  151 (327)
T ss_pred             CCCCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCC-----CCCCEEEEEeCCc
Confidence            9999999998643 458999999999999999999999999999999999999998777777     8999999999999


Q ss_pred             hHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314          165 AVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT  241 (327)
Q Consensus       165 ~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~  241 (327)
                      .+|++++++|+.+|++++++++. ++.+.++++|.+.+++....+  ..+...+.++++|+++||+++.....+++++++
T Consensus       152 ~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~  231 (327)
T PRK10754        152 GVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQR  231 (327)
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhcc
Confidence            99999999999999999988854 677888899998888776544  234455667789999999998778889999999


Q ss_pred             CcEEEeecCCchhHHHHhhhh------ccccceeeEEEEeCC--CHHHHHHHHHHHHCCceeEe--cceeeccccHHHHH
Q 020314          242 TGKVIDFNPSPRVLLTFAWKK------LTFSKKQLVPFSVSP--KGENLDFLVKLVKEGKLKTV--IDSKHSLSKAEDAW  311 (327)
Q Consensus       242 ~G~~v~~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~a~  311 (327)
                      +|+++.+|........+....      .......+.+.....  ..+.++.+++++.+|.+++.  ..+.|+++++++++
T Consensus       232 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~  311 (327)
T PRK10754        232 RGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAH  311 (327)
T ss_pred             CCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHH
Confidence            999999985432111111111      111111122211111  12345678899999999853  46889999999999


Q ss_pred             HHHhcCCCCccEEEeC
Q 020314          312 AKSISGRATGKIIVEP  327 (327)
Q Consensus       312 ~~~~~~~~~gkvvv~~  327 (327)
                      +.+.++...||+|+.+
T Consensus       312 ~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        312 EILESRATQGSSLLIP  327 (327)
T ss_pred             HHHHcCCCcceEEEeC
Confidence            9999999999999864

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.1e-39  Score=288.40  Aligned_cols=309  Identities=27%  Similarity=0.395  Sum_probs=255.6

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.+++  +..+++++.+.|.+.++||+||+.++++|+.|++...|.++.  +...|..+|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~--~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~vG~~~~   76 (341)
T cd08297           1 MKAAVVEEFG--EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPV--KPKLPLIGGHEGAGVVVAVGPGVS   76 (341)
T ss_pred             CceEEeeccC--CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCc--CCCCCccCCcccceEEEEeCCCCC
Confidence            7999998877  345999999999999999999999999999999998887642  124567899999999999999999


Q ss_pred             CCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           87 NFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        87 ~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      .+++||+|+..+                            ..|++++|+.++.+.++++|+++++.+++.++..+.|||+
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~  156 (341)
T cd08297          77 GLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYK  156 (341)
T ss_pred             CCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHH
Confidence            999999998742                            2689999999999999999999999999999999999999


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCC
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSP  215 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~  215 (327)
                      ++.. .++     +++++|||+|+++.+|++++++|+++|++|++++++ ++.+.++++|.+.++++.+.+  ..+.+..
T Consensus       157 ~~~~-~~~-----~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~  230 (341)
T cd08297         157 ALKK-AGL-----KPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELT  230 (341)
T ss_pred             HHHh-cCC-----CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHh
Confidence            9865 466     889999999988889999999999999999999854 677788889999988877654  2344455


Q ss_pred             CCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314          216 SGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL  294 (327)
Q Consensus       216 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  294 (327)
                      .++++|+++|+.++ ..+..++++++++|+++.+|........+....+..++..+.+. .....+.++.++++++++.+
T Consensus       231 ~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l  309 (341)
T cd08297         231 GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGS-LVGTRQDLQEALEFAARGKV  309 (341)
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEe-ccCCHHHHHHHHHHHHcCCC
Confidence            66789999997764 55888999999999999998654322222233334556555552 22346889999999999998


Q ss_pred             eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          295 KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       295 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .+.+ ..|++++++++++.+.++...||+++++
T Consensus       310 ~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         310 KPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             ccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            7654 5799999999999999999999999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-39  Score=287.53  Aligned_cols=313  Identities=30%  Similarity=0.413  Sum_probs=254.8

Q ss_pred             ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      ||||+++.+.+. .+.+++++.+.|++.++||+||+.++|+|+.|.....|.++.  ...+|.++|+|++|+|+++|+++
T Consensus         1 ~m~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v   77 (334)
T PTZ00354          1 MMRAVTLKGFGG-VDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDV   77 (334)
T ss_pred             CcEEEEEEecCC-CcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCC
Confidence            699999998876 456788888888899999999999999999999998876532  12456789999999999999999


Q ss_pred             CCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCCh
Q 020314           86 KNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA  165 (327)
Q Consensus        86 ~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~  165 (327)
                      +++++||+|+++..+|++++|++++.+.++++|+++++.+++.++.++.+||+++.+..++     +++++|+|+|++|+
T Consensus        78 ~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~-----~~~~~vlI~ga~g~  152 (334)
T PTZ00354         78 KRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDV-----KKGQSVLIHAGASG  152 (334)
T ss_pred             CCCCCCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCEEEEEcCCch
Confidence            9999999999976679999999999999999999999999999999999999999777777     88999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC---cccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314          166 VGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD---GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT  241 (327)
Q Consensus       166 ~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~  241 (327)
                      +|++++++|+++|++++.+++ +++.+.+.++|.+.++++...+   ..+.+.+.++++|++||+++++.+..+++++++
T Consensus       153 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~  232 (334)
T PTZ00354        153 VGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAV  232 (334)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcc
Confidence            999999999999998777664 4677888889998888775533   233444556789999999998888899999999


Q ss_pred             CcEEEeecCCchhHHH-HhhhhccccceeeEEEEeCC-----C----HHHHHHHHHHHHCCceeEecceeeccccHHHHH
Q 020314          242 TGKVIDFNPSPRVLLT-FAWKKLTFSKKQLVPFSVSP-----K----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAW  311 (327)
Q Consensus       242 ~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~  311 (327)
                      +|+++.++........ +....+..+...+.+.....     .    .+.++.+++++.++.+.+.+.+.++++++++++
T Consensus       233 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  312 (334)
T PTZ00354        233 DGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAH  312 (334)
T ss_pred             CCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHH
Confidence            9999998754322211 22222233333444422211     1    134577889999999987777889999999999


Q ss_pred             HHHhcCCCCccEEEe
Q 020314          312 AKSISGRATGKIIVE  326 (327)
Q Consensus       312 ~~~~~~~~~gkvvv~  326 (327)
                      +.+.+++..||++++
T Consensus       313 ~~~~~~~~~~kvvv~  327 (334)
T PTZ00354        313 TFLEQNKNIGKVVLT  327 (334)
T ss_pred             HHHHhCCCCceEEEe
Confidence            999988888999985

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.7e-39  Score=282.46  Aligned_cols=299  Identities=30%  Similarity=0.366  Sum_probs=246.1

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||+|++.+.+  |..+++++.+.|.+.++||+||+.++++|+.|++...+.       ..|.++|+|++|+|+++|+++.
T Consensus         1 ~~~~~~~~~~--~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-------~~~~~~g~e~~G~v~~~G~~v~   71 (305)
T cd08270           1 MRALVVDPDA--PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-------PDGAVPGWDAAGVVERAAADGS   71 (305)
T ss_pred             CeEEEEccCC--CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-------CCCCcccceeEEEEEEeCCCCC
Confidence            6899998754  567888899999999999999999999999999876522       2356899999999999999999


Q ss_pred             CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314           87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV  166 (327)
Q Consensus        87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~  166 (327)
                      .+++||+|+++...|+|++|+.++.+.++++|+++++++++.+++.+.|||+++.+....      ++++++|+|++|++
T Consensus        72 ~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~------~~~~vli~g~~~~~  145 (305)
T cd08270          72 GPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL------LGRRVLVTGASGGV  145 (305)
T ss_pred             CCCCCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC------CCCEEEEECCCcHH
Confidence            999999999976689999999999999999999999999999999999999999665433      59999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEE
Q 020314          167 GLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKV  245 (327)
Q Consensus       167 G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~  245 (327)
                      |++++++|+..|++++.+++ +++.+.++++|++.+++....      .. ++++|+++|++|+..+..++++++++|++
T Consensus       146 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~-~~~~d~vl~~~g~~~~~~~~~~l~~~G~~  218 (305)
T cd08270         146 GRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGSE------LS-GAPVDLVVDSVGGPQLARALELLAPGGTV  218 (305)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecccc------cc-CCCceEEEECCCcHHHHHHHHHhcCCCEE
Confidence            99999999999999999885 467888888998766543221      11 24699999999988888999999999999


Q ss_pred             EeecCCchhHHHHhhhhccc--cceeeEEEEeC---CCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCC
Q 020314          246 IDFNPSPRVLLTFAWKKLTF--SKKQLVPFSVS---PKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRAT  320 (327)
Q Consensus       246 v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~  320 (327)
                      +.+|........+....+..  ++..+.++...   ...+.++.+++++.++++++.+.+.+++++++++++.+.+++..
T Consensus       219 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~  298 (305)
T cd08270         219 VSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFR  298 (305)
T ss_pred             EEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCC
Confidence            99985432212222222222  35555553322   12467888999999999987777899999999999999999999


Q ss_pred             ccEEEeC
Q 020314          321 GKIIVEP  327 (327)
Q Consensus       321 gkvvv~~  327 (327)
                      ||+|+++
T Consensus       299 gkvvi~~  305 (305)
T cd08270         299 GKAVLDV  305 (305)
T ss_pred             ceEEEeC
Confidence            9999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=2.1e-39  Score=286.54  Aligned_cols=312  Identities=23%  Similarity=0.279  Sum_probs=246.5

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||++++++++ ++.+++++.+.|.+.++||+||+.++|+|++|++...|.++.  ...+|.++|||++|+|+++  +++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~--~~~   75 (325)
T cd05280           1 FKALVVEEQDG-GVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV--TRNYPHTPGIDAAGTVVSS--DDP   75 (325)
T ss_pred             CceEEEcccCC-CCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC--CCCCCCccCcccEEEEEEe--CCC
Confidence            79999998875 456999999999999999999999999999999999887531  1245789999999999998  456


Q ss_pred             CCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCC-CCCeEEE
Q 020314           87 NFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSG-QQKNILI  159 (327)
Q Consensus        87 ~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~-~~~~vlV  159 (327)
                      .+++||+|++..      .+|+|++|++++.+.++++|+++++++++.+++.+.++|+++....+..   .. ++++|+|
T Consensus        76 ~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~---~~~~~~~vlI  152 (325)
T cd05280          76 RFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNG---QTPEDGPVLV  152 (325)
T ss_pred             CCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhcc---CCCCCCEEEE
Confidence            899999999853      3689999999999999999999999999999999999999986554321   13 4579999


Q ss_pred             EcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccc
Q 020314          160 TAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPN  238 (327)
Q Consensus       160 ~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  238 (327)
                      +|++|++|++++++|+.+|++|+++++ +++++.++++|++.+++..+......+...++++|+++|++|++.+..++++
T Consensus       153 ~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  232 (325)
T cd05280         153 TGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLKQ  232 (325)
T ss_pred             ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHHh
Confidence            999999999999999999999888885 4678888999999888765432222333444579999999999889999999


Q ss_pred             cCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC-C----CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHH
Q 020314          239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS-P----KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAK  313 (327)
Q Consensus       239 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~  313 (327)
                      ++++|+++.+|........+....+..++..+.+.... .    ..+.++.+.+++..+ +...+...|++++++++++.
T Consensus       233 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~  311 (325)
T cd05280         233 TKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPD-LLEIVVREISLEELPEAIDR  311 (325)
T ss_pred             hcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcC-CccceeeEecHHHHHHHHHH
Confidence            99999999998643221122223333455555553221 1    123455666666666 33456779999999999999


Q ss_pred             HhcCCCCccEEEeC
Q 020314          314 SISGRATGKIIVEP  327 (327)
Q Consensus       314 ~~~~~~~gkvvv~~  327 (327)
                      +.+++..||+|+++
T Consensus       312 ~~~~~~~gk~vv~~  325 (325)
T cd05280         312 LLAGKHRGRTVVKI  325 (325)
T ss_pred             HhcCCcceEEEEeC
Confidence            99999999999874

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=1.3e-39  Score=266.66  Aligned_cols=307  Identities=24%  Similarity=0.267  Sum_probs=247.7

Q ss_pred             eEEEEEeccCC---CccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccc----eEEEE
Q 020314            7 MHAVQYDSYGG---GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDV----AGEVI   79 (327)
Q Consensus         7 ~~a~~~~~~g~---~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~----~G~V~   79 (327)
                      .|.|++.....   .++.+++++.++|+|.++|||+|+.|.|++|..+-.++... ++   -.|+.+|...    +|+|+
T Consensus         9 ~~~~~la~rP~g~p~~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~-SY---~~P~~lG~~~~gg~V~~Vv   84 (340)
T COG2130           9 NRRIVLASRPEGAPVPDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAP-SY---APPVELGEVMVGGTVAKVV   84 (340)
T ss_pred             hheeeeccCCCCCCCCCCceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCc-cc---CCCcCCCceeECCeeEEEE
Confidence            36677755321   14669999999999999999999999999996554444332 22   2345555444    45555


Q ss_pred             ecCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCC--hhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeE
Q 020314           80 GLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVS--AAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNI  157 (327)
Q Consensus        80 ~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~--~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~v  157 (327)
                      +  |+..+|++||.|.+.   .+|++|..++...+.++++..-  ......+.++..|||.+|.+.++.     |+|++|
T Consensus        85 ~--S~~~~f~~GD~V~~~---~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqp-----k~Getv  154 (340)
T COG2130          85 A--SNHPGFQPGDIVVGV---SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQP-----KAGETV  154 (340)
T ss_pred             e--cCCCCCCCCCEEEec---ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCC-----CCCCEE
Confidence            5  678899999999986   4999999999999999986533  233456788899999999999988     999999


Q ss_pred             EEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHh-cCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCCCcccc
Q 020314          158 LITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKS-LGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWST  234 (327)
Q Consensus       158 lV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~-lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~  234 (327)
                      +|.+|+|++|..+.|+||..|++|++++ +++|.+++++ +|.|.++|++..+ .+.++..+..|+|++||++|++.++.
T Consensus       155 vVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~v~DA  234 (340)
T COG2130         155 VVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGEVLDA  234 (340)
T ss_pred             EEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCchHHHH
Confidence            9999999999999999999999999999 4589998876 9999999999888 45666778899999999999999999


Q ss_pred             cccccCCCcEEEeecCCch------hHHHHhhhhccccceeeEEEEeCC-----CHHHHHHHHHHHHCCceeEecceeec
Q 020314          235 FEPNLGTTGKVIDFNPSPR------VLLTFAWKKLTFSKKQLVPFSVSP-----KGENLDFLVKLVKEGKLKTVIDSKHS  303 (327)
Q Consensus       235 ~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~~~~~~~~~  303 (327)
                      .+..|+.++|++.+|.-+.      ...+-.+..+..++.++.|+....     .++.++++..++++|+|+...+.+-.
T Consensus       235 v~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dG  314 (340)
T COG2130         235 VLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDG  314 (340)
T ss_pred             HHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhh
Confidence            9999999999999984321      111223334455677888875521     24778999999999999988777778


Q ss_pred             cccHHHHHHHHhcCCCCccEEEeC
Q 020314          304 LSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       304 ~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++|+||..|.+|++.||+|+++
T Consensus       315 lEnaP~Af~gLl~G~N~GK~vvKv  338 (340)
T COG2130         315 LENAPEAFIGLLSGKNFGKLVVKV  338 (340)
T ss_pred             hhccHHHHHHHhcCCccceEEEEe
Confidence            999999999999999999999874

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-39  Score=291.65  Aligned_cols=307  Identities=28%  Similarity=0.388  Sum_probs=252.7

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||||++.+++.+   +++++.+.|.+.++||+||+.++++|+.|++...+.++    ..+|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~   73 (367)
T cd08263           1 MKAAVLKGPNPP---LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVE   73 (367)
T ss_pred             CeeEEEecCCCC---cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCC
Confidence            789999888654   88889999999999999999999999999999888764    35678999999999999999998


Q ss_pred             C---CCCCCEEEEE-------------------------------------------------ccCcccceeEeecCCce
Q 020314           87 N---FKVGDKVVAV-------------------------------------------------LSGGGLAEFAVAKESLT  114 (327)
Q Consensus        87 ~---~~~Gd~V~~~-------------------------------------------------~~~g~~a~~~~~~~~~~  114 (327)
                      +   +++||+|++.                                                 ...|+|++|+.++.+.+
T Consensus        74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  153 (367)
T cd08263          74 NPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATAL  153 (367)
T ss_pred             CCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhE
Confidence            8   9999999872                                                 13589999999999999


Q ss_pred             eeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHH
Q 020314          115 VARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIEL  192 (327)
Q Consensus       115 ~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~  192 (327)
                      +++|+++++.+++.++.+++|||+++.....+     .++++|||+| +|++|++++++|+.+|++ ++++++ +++.+.
T Consensus       154 ~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~-----~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~  227 (367)
T cd08263         154 APLPESLDYTESAVLGCAGFTAYGALKHAADV-----RPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAK  227 (367)
T ss_pred             EECCCCCCHHHHhHhcchHHHHHHHHHhcccC-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Confidence            99999999999999999999999999777777     7899999996 799999999999999997 877764 467778


Q ss_pred             HHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchh-HHHHhhhhccccce
Q 020314          193 VKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRV-LLTFAWKKLTFSKK  268 (327)
Q Consensus       193 ~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~  268 (327)
                      ++++|++.+++++..+  .++.+...++++|++||++++. .+..++++++++|+++.++..... ...+....+..++.
T Consensus       228 ~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  307 (367)
T cd08263         228 AKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGI  307 (367)
T ss_pred             HHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCe
Confidence            8889999998876554  2344445567899999999987 688899999999999999854321 11122222223444


Q ss_pred             eeEEEEeCCCHHHHHHHHHHHHCCceeEe--cceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          269 QLVPFSVSPKGENLDFLVKLVKEGKLKTV--IDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      .+.+.+.....+.++.+++++.++.+.+.  +.+.+++++++++++.+.+++..||+|++
T Consensus       308 ~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         308 KIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             EEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            44442222235788999999999998763  56789999999999999999989999985

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=5.3e-39  Score=285.57  Aligned_cols=302  Identities=20%  Similarity=0.238  Sum_probs=239.7

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.+++.    +++++.+.|++.++||+||+.++++|++|++...|.++.   ..+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~----~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~   73 (339)
T PRK10083          1 MKSIVIEKPNS----LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVD   73 (339)
T ss_pred             CeEEEEecCCe----eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCc
Confidence            68999987553    899999999999999999999999999999998887542   25689999999999999999999


Q ss_pred             CCCCCCEEEE---------------------------EccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVA---------------------------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~---------------------------~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      ++++||+|+.                           +..+|+|++|+.++...++++|+++++++++ +..++.++|++
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~  152 (339)
T PRK10083         74 AARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV  152 (339)
T ss_pred             cCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence            9999999983                           2236899999999999999999999998876 55677888865


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHh-CCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCCc-ccccCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL-GNTH-VTATCG-ARNIELVKSLGADEVLDYKTPDG-AALKSP  215 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~-~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~  215 (327)
                      . +..++     +++++|+|+| +|++|++++|+|+. +|++ ++++.+ +++.++++++|++.++++.+.+. +.+.. 
T Consensus       153 ~-~~~~~-----~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~-  224 (339)
T PRK10083        153 T-GRTGP-----TEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEE-  224 (339)
T ss_pred             H-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhc-
Confidence            4 66777     8999999999 79999999999996 6995 555554 46888899999999998765432 22211 


Q ss_pred             CCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314          216 SGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL  294 (327)
Q Consensus       216 ~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  294 (327)
                      .+.++|++||++|+. .+..++++++++|+++.+|..... ..+....+..+.+.+.+.  ....+.++.+++++.++++
T Consensus       225 ~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~l  301 (339)
T PRK10083        225 KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEP-SEIVQQGITGKELSIFSS--RLNANKFPVVIDWLSKGLI  301 (339)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-ceecHHHHhhcceEEEEE--ecChhhHHHHHHHHHcCCC
Confidence            233467999999964 588999999999999999865321 112222223344444432  2345778999999999998


Q ss_pred             eE--ecceeeccccHHHHHHHHhcCC-CCccEEEeC
Q 020314          295 KT--VIDSKHSLSKAEDAWAKSISGR-ATGKIIVEP  327 (327)
Q Consensus       295 ~~--~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~  327 (327)
                      ++  ++.+.|+++++++|++.+.+++ ..+|+++++
T Consensus       302 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        302 DPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             ChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence            86  4678999999999999998654 468999864

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.1e-39  Score=285.41  Aligned_cols=306  Identities=24%  Similarity=0.360  Sum_probs=253.3

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||||++.+++.+   +++++.+.|.+.+++|+||+.++++|+.|+....|..+.   ..+|.++|+|++|+|+.+|++++
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~   74 (345)
T cd08260           1 MRAAVYEEFGEP---LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVS   74 (345)
T ss_pred             CeeEEEecCCCC---cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCc
Confidence            799999887764   888999999999999999999999999999998887642   35688999999999999999999


Q ss_pred             CCCCCCEEEE---------------------------EccCcccceeEeecCC--ceeeCCCCCChhhhcccCchHHHHH
Q 020314           87 NFKVGDKVVA---------------------------VLSGGGLAEFAVAKES--LTVARPQEVSAAEGAGIPCAGLTAH  137 (327)
Q Consensus        87 ~~~~Gd~V~~---------------------------~~~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ta~  137 (327)
                      ++++||+|++                           +...|+|++|+.+++.  .++++|+++++++++.++.++.+||
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~  154 (345)
T cd08260          75 RWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAF  154 (345)
T ss_pred             cCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHH
Confidence            9999999986                           2236899999999985  8999999999999999999999999


Q ss_pred             HHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCC-CC--ccccc
Q 020314          138 QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKT-PD--GAALK  213 (327)
Q Consensus       138 ~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~-~~--~~~~~  213 (327)
                      +++....++     .++++|+|+| +|++|++++++|+..|++++++++ .++.+.++++|++.++++++ .+  ..+..
T Consensus       155 ~~l~~~~~~-----~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~  228 (345)
T cd08260         155 RALVHQARV-----KPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRD  228 (345)
T ss_pred             HHHHHccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHH
Confidence            999777777     7899999999 799999999999999999998874 46788888899999998876 33  22333


Q ss_pred             CCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhH--HHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHH
Q 020314          214 SPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVL--LTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVK  290 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (327)
                      ...+ ++|++|||+|+ ..+..++++++++|+++.+|......  ..+....+..++..+.+.. ....+.++.++++++
T Consensus       229 ~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~  306 (345)
T cd08260         229 LTGG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSH-GMPAHRYDAMLALIA  306 (345)
T ss_pred             HhCC-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCC-cCCHHHHHHHHHHHH
Confidence            3444 79999999985 45788999999999999998643221  1222333334555555532 245678899999999


Q ss_pred             CCceeEe--cceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          291 EGKLKTV--IDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       291 ~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      ++.+.+.  +.+.+++++++++++.+.++...||+|++
T Consensus       307 ~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         307 SGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             cCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            9998753  56789999999999999999999999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=5.6e-39  Score=289.60  Aligned_cols=306  Identities=23%  Similarity=0.265  Sum_probs=246.5

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      |||++++++    +.+++++.+.|.+ .+++|+||+.++++|++|++...|.++.   ..+|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~----~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v   73 (386)
T cd08283           1 MKALVWHGK----GDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEV   73 (386)
T ss_pred             CeeEEEecC----CCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCC
Confidence            789999754    3489999999888 4999999999999999999999998653   2568899999999999999999


Q ss_pred             CCCCCCCEEEEEc-----------------------------------------------cCcccceeEeecCC--ceee
Q 020314           86 KNFKVGDKVVAVL-----------------------------------------------SGGGLAEFAVAKES--LTVA  116 (327)
Q Consensus        86 ~~~~~Gd~V~~~~-----------------------------------------------~~g~~a~~~~~~~~--~~~~  116 (327)
                      +++++||+|++.+                                               ..|+|++|++++.+  .+++
T Consensus        74 ~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~  153 (386)
T cd08283          74 RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK  153 (386)
T ss_pred             CCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence            9999999998743                                               15899999999988  8999


Q ss_pred             CCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHH
Q 020314          117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVK  194 (327)
Q Consensus       117 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~  194 (327)
                      +|+++++++++.++..+.+||+++ +..++     .++++|||+| +|.+|++++++|++.|+ +++++++ +++.+.++
T Consensus       154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~-----~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~  226 (386)
T cd08283         154 IPDDLSDEKALFLSDILPTGYHAA-ELAEV-----KPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMAR  226 (386)
T ss_pred             CCCCCCHHHHhhhccchhhhHHHH-hhccC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence            999999999999999999999999 77777     8899999997 79999999999999998 5888874 57888888


Q ss_pred             hcCCCEEEeCCCCC---cccccCCCCCcccEEEeCCCCC----------------------cccccccccCCCcEEEeec
Q 020314          195 SLGADEVLDYKTPD---GAALKSPSGRKYDAVINCVTGI----------------------PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       195 ~lg~~~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~----------------------~~~~~~~~l~~~G~~v~~g  249 (327)
                      +++...++++...+   ..+...+.++++|++||++|++                      .+..++++++++|+++.+|
T Consensus       227 ~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g  306 (386)
T cd08283         227 SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIG  306 (386)
T ss_pred             HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEc
Confidence            88444677765542   2233445566899999999854                      3667889999999999998


Q ss_pred             CCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCC-CCccEEEe
Q 020314          250 PSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGR-ATGKIIVE  326 (327)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~  326 (327)
                      ........+.......+...+.+. .....+.++.++++++++++.+  .+.+.|+++++++|++.+.++. ..+|++++
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         307 VYGGTVNKFPIGAAMNKGLTLRMG-QTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             CCCCCcCccCHHHHHhCCcEEEec-cCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence            653321122222233445555542 2334677899999999999876  3567899999999999998877 45899987


Q ss_pred             C
Q 020314          327 P  327 (327)
Q Consensus       327 ~  327 (327)
                      +
T Consensus       386 ~  386 (386)
T cd08283         386 P  386 (386)
T ss_pred             C
Confidence            4

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=7.8e-39  Score=285.66  Aligned_cols=309  Identities=28%  Similarity=0.380  Sum_probs=252.2

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCC---------CCCCCCeeecccceEE
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF---------LPRKFPFIPASDVAGE   77 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~---------~~~~~p~~~G~e~~G~   77 (327)
                      |||+++...+++   +++++.+.|++.++||+||+.++++|++|++...|.++..         ....+|.++|+|++|+
T Consensus         1 ~~a~~~~~~~~~---~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~   77 (350)
T cd08240           1 MKAAAVVEPGKP---LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGE   77 (350)
T ss_pred             CeeEEeccCCCC---ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEE
Confidence            799999887764   8889999999999999999999999999999988865310         0124568899999999


Q ss_pred             EEecCCCCCCCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314           78 VIGLGSEVKNFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP  130 (327)
Q Consensus        78 V~~vG~~~~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~  130 (327)
                      |+++|++++++++||+|++++                           ..|++++|+.++.+.++++|+++++.+++.+.
T Consensus        78 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~  157 (350)
T cd08240          78 VVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLA  157 (350)
T ss_pred             EEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhh
Confidence            999999999999999998752                           46899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCCCC
Q 020314          131 CAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKTPD  208 (327)
Q Consensus       131 ~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~  208 (327)
                      +.+.|||+++.....+     +++++|+|+| +|++|++++|+|+..|+ +|+++++ +++.+.++++|.+.+++..+..
T Consensus       158 ~~~~tA~~~~~~~~~~-----~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~  231 (350)
T cd08240         158 CSGLTAYSAVKKLMPL-----VADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPD  231 (350)
T ss_pred             chhhhHHHHHHhcccC-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCcc
Confidence            9999999999766555     6889999996 79999999999999999 6777774 4678888999998888766544


Q ss_pred             c--ccccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHH
Q 020314          209 G--AALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFL  285 (327)
Q Consensus       209 ~--~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
                      .  .+.+...+ ++|++||++|. ..+..++++|+++|+++.+|..... .........+++..+.+.. ....+++..+
T Consensus       232 ~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~  308 (350)
T cd08240         232 AAKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSY-VGSLEELREL  308 (350)
T ss_pred             HHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcc-cCCHHHHHHH
Confidence            2  23333344 79999999985 4588999999999999998854332 1112222345666666532 3345788999


Q ss_pred             HHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          286 VKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       286 ~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++++.+++.....+++++++++++.+.+++..||+++.+
T Consensus       309 ~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         309 VALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             HHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence            999999998876667899999999999999999899999864

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-39  Score=284.05  Aligned_cols=304  Identities=30%  Similarity=0.402  Sum_probs=249.6

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.+++++   +++++.+.|.+.++||+||+.++++|+.|++...|..+.   ..+|..+|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~g~~~~   74 (334)
T PRK13771          1 MKAVILPGFKQG---YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR---MKYPVILGHEVVGTVEEVGENVK   74 (334)
T ss_pred             CeeEEEcCCCCC---cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC---CCCCeeccccceEEEEEeCCCCc
Confidence            789999888764   899999999999999999999999999999988886531   25678999999999999999998


Q ss_pred             CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      .+++||+|++..                           .+|+|++|+.++.+.++++|+++++.+++.+++++.++|++
T Consensus        75 ~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~  154 (334)
T PRK13771         75 GFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG  154 (334)
T ss_pred             cCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence            899999999863                           16899999999999999999999999999999999999999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGR  218 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~  218 (327)
                      +... ++     .++++|+|+|++|.+|++++++|+..|++++++++ +++.+.++++ ++.+++.......+.+ .  .
T Consensus       155 ~~~~-~~-----~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~-~--~  224 (334)
T PRK13771        155 LRRA-GV-----KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGSKFSEEVKK-I--G  224 (334)
T ss_pred             HHhc-CC-----CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCchhHHHHHHh-c--C
Confidence            8655 77     78999999999999999999999999999988875 4677777777 6666655411122222 2  2


Q ss_pred             cccEEEeCCCCCcccccccccCCCcEEEeecCCchhHH-HHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEe
Q 020314          219 KYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLL-TFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV  297 (327)
Q Consensus       219 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~  297 (327)
                      ++|+++||+|+..+..++++++++|+++.+|....... .........++..+.+. ....++.++.++++++++.+++.
T Consensus       225 ~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~  303 (334)
T PRK13771        225 GADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGH-ISATKRDVEEALKLVAEGKIKPV  303 (334)
T ss_pred             CCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEe-cCCCHHHHHHHHHHHHcCCCcce
Confidence            69999999998778899999999999999986432211 11111223455555553 23457889999999999999877


Q ss_pred             cceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       298 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +.+.|++++++++++.+.++...||+++.+
T Consensus       304 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        304 IGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             EeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            778999999999999999988889999864

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.1e-38  Score=281.30  Aligned_cols=300  Identities=23%  Similarity=0.348  Sum_probs=249.9

Q ss_pred             EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314            8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN   87 (327)
Q Consensus         8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   87 (327)
                      |+|+++..+.   .+++++.+.|++.++||+||+.++++|+.|++...|...   ...+|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~---~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~   74 (337)
T cd05283           1 KGYAARDASG---KLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTK   74 (337)
T ss_pred             CceEEecCCC---CceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcc
Confidence            5788887664   599999999999999999999999999999999988763   2356889999999999999999999


Q ss_pred             CCCCCEEEEE-----------------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCch
Q 020314           88 FKVGDKVVAV-----------------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCA  132 (327)
Q Consensus        88 ~~~Gd~V~~~-----------------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~  132 (327)
                      +++||+|+..                                   ...|+|++|+.++.+.++++|+++++++++.+.+.
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~  154 (337)
T cd05283          75 FKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA  154 (337)
T ss_pred             cCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhH
Confidence            9999999731                                   23689999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCccc
Q 020314          133 GLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAA  211 (327)
Q Consensus       133 ~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~  211 (327)
                      +.+||+++.+ .++     +++++++|.| .|++|++++++|+..|+++++++++ ++.+.++++|++.+++....+.. 
T Consensus       155 ~~ta~~~~~~-~~~-----~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~-  226 (337)
T cd05283         155 GITVYSPLKR-NGV-----GPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAM-  226 (337)
T ss_pred             HHHHHHHHHh-cCC-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhh-
Confidence            9999999854 456     7899999977 7999999999999999999888854 67788889999988876553321 


Q ss_pred             ccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHH
Q 020314          212 LKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVK  290 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (327)
                       + ..++++|++|||+|... +..++++++++|+++.+|...... .+....+..++..+.+.. ....+.++.+++++.
T Consensus       227 -~-~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~  302 (337)
T cd05283         227 -K-KAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPL-PVPPFPLIFGRKSVAGSL-IGGRKETQEMLDFAA  302 (337)
T ss_pred             -h-hccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCC-ccCHHHHhcCceEEEEec-ccCHHHHHHHHHHHH
Confidence             1 12467999999999875 889999999999999998653321 223333445677777643 346678999999999


Q ss_pred             CCceeEecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          291 EGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       291 ~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      ++++++.+ +.|+++++++||+.+.+++..||+|++
T Consensus       303 ~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         303 EHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             hCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence            99988754 689999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=9e-39  Score=282.62  Aligned_cols=314  Identities=22%  Similarity=0.281  Sum_probs=239.5

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||||++.++|+ ++.+++++.+.|.+.++||+||+.++++|+.|.....+...  ....+|.++|||++|+|++.|  ++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~V~~~~--~~   75 (326)
T cd08289           1 FQALVVEKDED-DVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK--IVKRYPFIPGIDLAGTVVESN--DP   75 (326)
T ss_pred             CeeEEEeccCC-cceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc--ccCCCCcCcccceeEEEEEcC--CC
Confidence            79999998875 56788999999999999999999999999999876643211  012457899999999999954  57


Q ss_pred             CCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE
Q 020314           87 NFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT  160 (327)
Q Consensus        87 ~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~  160 (327)
                      .+++||+|++..      ..|+|++|..++++.++++|+++++++++.+++++.|||+++....+...  ..++++|||+
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~--~~~~~~vlI~  153 (326)
T cd08289          76 RFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGL--TPEQGPVLVT  153 (326)
T ss_pred             CCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCC--CCCCCEEEEE
Confidence            799999999864      37999999999999999999999999999999999999998865433110  0457899999


Q ss_pred             cCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccccccccc
Q 020314          161 AASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNL  239 (327)
Q Consensus       161 g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l  239 (327)
                      |++|++|++++++|+++|++|+++++ +++.+.++++|++.+++.++.....+....++++|++||++|+..+..+++++
T Consensus       154 g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l  233 (326)
T cd08289         154 GATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTL  233 (326)
T ss_pred             cCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHHHh
Confidence            99999999999999999999998885 47888889999988887654322222222356799999999987788999999


Q ss_pred             CCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC-C----CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314          240 GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS-P----KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS  314 (327)
Q Consensus       240 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~  314 (327)
                      +++|+++.+|.......+.....+..++..+.+.... .    ..+.++.+...+....+...+.+.+++++++++|+.+
T Consensus       234 ~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~  313 (326)
T cd08289         234 QYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQI  313 (326)
T ss_pred             hcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHH
Confidence            9999999998643221121122333455555553211 1    1223333333333233333567899999999999999


Q ss_pred             hcCCCCccEEEeC
Q 020314          315 ISGRATGKIIVEP  327 (327)
Q Consensus       315 ~~~~~~gkvvv~~  327 (327)
                      .+++..||+++++
T Consensus       314 ~~~~~~gkvvv~~  326 (326)
T cd08289         314 LQGRVTGRTVVKL  326 (326)
T ss_pred             hcCcccceEEEeC
Confidence            9999999999874

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-38  Score=280.78  Aligned_cols=304  Identities=31%  Similarity=0.413  Sum_probs=249.1

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++..++   +.+.+++.+.|.+.+++|+|+++++++|+.|++...|.++.   ...|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~---~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~   74 (332)
T cd08259           1 MKAAILHKPN---KPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVE   74 (332)
T ss_pred             CeEEEEecCC---CceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCc
Confidence            6899998633   34889999999999999999999999999999998887542   25678999999999999999999


Q ss_pred             CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      .+++||+|+++.                           ..|+|++|++++...++++|+++++++++.++.++.+||++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~  154 (332)
T cd08259          75 RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA  154 (332)
T ss_pred             cCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence            999999999864                           16899999999999999999999999999999999999999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGR  218 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~  218 (327)
                      +.. .++     .++++++|+|++|++|++++++++..|+++++++++ ++.+.+++++.+.+++..+ ..+.+...  .
T Consensus       155 l~~-~~~-----~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~  225 (332)
T cd08259         155 LKR-AGV-----KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK-FSEDVKKL--G  225 (332)
T ss_pred             HHH-hCC-----CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH-HHHHHHhc--c
Confidence            966 777     789999999999999999999999999999988854 6677778888887776544 21222222  2


Q ss_pred             cccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEec
Q 020314          219 KYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVI  298 (327)
Q Consensus       219 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~  298 (327)
                      ++|+++|++|......++++++++|+++.++........+......+++..+.+. .......++.+++++.++.+++.+
T Consensus       226 ~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~  304 (332)
T cd08259         226 GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGS-ISATKADVEEALKLVKEGKIKPVI  304 (332)
T ss_pred             CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEe-cCCCHHHHHHHHHHHHcCCCccce
Confidence            6999999999888888999999999999988543221111111122344444442 234577889999999999998877


Q ss_pred             ceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          299 DSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       299 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      .+.|++++++++++.+.+++..||++++
T Consensus       305 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         305 DRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             eEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            7899999999999999999888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=1.3e-38  Score=284.02  Aligned_cols=306  Identities=23%  Similarity=0.283  Sum_probs=246.9

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      ||++++.+++.    +++.+.+.|.+ .++||+||+.++++|+.|++...|.++.   ..+|.++|+|++|+|+++|+++
T Consensus         1 ~ka~~~~~~~~----~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v   73 (347)
T cd05278           1 MKALVYLGPGK----IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDV   73 (347)
T ss_pred             CceEEEecCCc----eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCc
Confidence            68999987654    88899999888 8999999999999999999999887642   3568899999999999999999


Q ss_pred             CCCCCCCEEEEE------------------------------ccCcccceeEeecCC--ceeeCCCCCChhhhcccCchH
Q 020314           86 KNFKVGDKVVAV------------------------------LSGGGLAEFAVAKES--LTVARPQEVSAAEGAGIPCAG  133 (327)
Q Consensus        86 ~~~~~Gd~V~~~------------------------------~~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~  133 (327)
                      +++++||+|++.                              ..+|+|++|++++++  .++++|+++++++++.++.++
T Consensus        74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~  153 (347)
T cd05278          74 KRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL  153 (347)
T ss_pred             cccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence            999999999872                              135899999999987  899999999999999999999


Q ss_pred             HHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCCc--
Q 020314          134 LTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPDG--  209 (327)
Q Consensus       134 ~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~--  209 (327)
                      .|||+++ ...++     +++++|||.| +|++|++++|+|+.+|. +++++.++ ++.+.++++|++.++++++.+.  
T Consensus       154 ~ta~~~~-~~~~~-----~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~  226 (347)
T cd05278         154 PTGFHGA-ELAGI-----KPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVE  226 (347)
T ss_pred             hheeehh-hhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHH
Confidence            9999998 66777     8899999976 69999999999999997 78877644 5777888999999988776542  


Q ss_pred             ccccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHH
Q 020314          210 AALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL  288 (327)
Q Consensus       210 ~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (327)
                      .+...+.++++|++||++++ ..+..++++++++|+++.+|................++..+.+. .....+.++.++++
T Consensus       227 ~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  305 (347)
T cd05278         227 QILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTG-LVPVRARMPELLDL  305 (347)
T ss_pred             HHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEee-ccCchhHHHHHHHH
Confidence            23334555789999999987 46888999999999999988543321100111111234444332 22336788999999


Q ss_pred             HHCCceeEe--cceeeccccHHHHHHHHhcCCC-CccEEEeC
Q 020314          289 VKEGKLKTV--IDSKHSLSKAEDAWAKSISGRA-TGKIIVEP  327 (327)
Q Consensus       289 ~~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~  327 (327)
                      ++++.+++.  +...|++++++++++.+..++. .+|+++++
T Consensus       306 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         306 IEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             HHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence            999998763  4578999999999999988877 68999865

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=1.3e-38  Score=282.89  Aligned_cols=313  Identities=33%  Similarity=0.478  Sum_probs=250.6

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++..+|  +..+++++.+.|.+.++||+||+.++++|+.|++...+...    ...|.++|+|++|+|+.+|++++
T Consensus         1 m~a~~~~~~~--~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~vG~~v~   74 (339)
T cd08249           1 QKAAVLTGPG--GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI----PSYPAILGCDFAGTVVEVGSGVT   74 (339)
T ss_pred             CceEEeccCC--CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccc----cCCCceeeeeeeEEEEEeCCCcC
Confidence            7899998875  45689999999999999999999999999999987755531    13567999999999999999999


Q ss_pred             CCCCCCEEEEEcc--------CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCcc-----CCCCC
Q 020314           87 NFKVGDKVVAVLS--------GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKL-----DGSGQ  153 (327)
Q Consensus        87 ~~~~Gd~V~~~~~--------~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~-----~~~~~  153 (327)
                      .+++||+|+++..        +|+|++|++++.+.++++|+++++++++.+++++.+||+++.+..++..     ...++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~  154 (339)
T cd08249          75 RFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASK  154 (339)
T ss_pred             cCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCC
Confidence            9999999999754        5899999999999999999999999999999999999999866654310     01258


Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCC-Cc
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTG-IP  231 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~-~~  231 (327)
                      +++++|+|++|.+|++++++|+++|+++++++++++.+.++.+|++.++++.+.+. ..+....++++|++||++|+ ..
T Consensus       155 ~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~  234 (339)
T cd08249         155 GKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPES  234 (339)
T ss_pred             CCEEEEEcChhHHHHHHHHHHHHcCCeEEEEECcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchH
Confidence            89999999999999999999999999999888778888889999999988766542 22222334679999999997 66


Q ss_pred             ccccccccCC--CcEEEeecCCchhHHHHhhhhccccceeeEEEE------eCCCHHHHHHHHHHHHCCceeEecceeec
Q 020314          232 WSTFEPNLGT--TGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFS------VSPKGENLDFLVKLVKEGKLKTVIDSKHS  303 (327)
Q Consensus       232 ~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~l~~~~~~~~~  303 (327)
                      +..+++++++  +|+++.+|......  .................      .......++.+++++.++++.+.....++
T Consensus       235 ~~~~~~~l~~~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  312 (339)
T cd08249         235 AQLCAEALGRSGGGKLVSLLPVPEET--EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVE  312 (339)
T ss_pred             HHHHHHHHhccCCCEEEEecCCCccc--cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecC
Confidence            8899999999  99999998664332  11112222222211111      11223567889999999999876656788


Q ss_pred             --cccHHHHHHHHhcCC-CCccEEEeC
Q 020314          304 --LSKAEDAWAKSISGR-ATGKIIVEP  327 (327)
Q Consensus       304 --~~~~~~a~~~~~~~~-~~gkvvv~~  327 (327)
                        ++++++|++.+.+++ ..+|+|+++
T Consensus       313 ~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         313 GGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             CcHHHHHHHHHHHHCCCccceEEEEeC
Confidence              999999999999998 889999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=3.5e-38  Score=278.50  Aligned_cols=308  Identities=22%  Similarity=0.312  Sum_probs=243.5

Q ss_pred             EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314            8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN   87 (327)
Q Consensus         8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   87 (327)
                      ||+++.+.+. ++.+++++.+.|.+.++||+||+.++++|+.|++...|.++.  +...|.++|||++|+|+.  .+++.
T Consensus         1 ~a~~~~~~~~-~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~   75 (323)
T TIGR02823         1 KALVVEKEDG-KVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV--VRSYPMIPGIDAAGTVVS--SEDPR   75 (323)
T ss_pred             CeEEEccCCC-CcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC--CCCCCccceeeeEEEEEe--cCCCC
Confidence            6889988775 578999999999999999999999999999999998887632  124578999999999998  56778


Q ss_pred             CCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhC--CccCCCCCCC-eEE
Q 020314           88 FKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLG--VKLDGSGQQK-NIL  158 (327)
Q Consensus        88 ~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~--~~~~~~~~~~-~vl  158 (327)
                      +++||+|+++.      ..|++++|..++.+.++++|+++++++++.+++.+.++++++....+  +     .+++ +|+
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~-----~~~~~~vl  150 (323)
T TIGR02823        76 FREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGL-----TPEDGPVL  150 (323)
T ss_pred             CCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCC-----CCCCceEE
Confidence            99999999864      36899999999999999999999999999999999999988754433  4     7888 999


Q ss_pred             EEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccccccc
Q 020314          159 ITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP  237 (327)
Q Consensus       159 V~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  237 (327)
                      |+|++|.+|++++++|+++|++++++++ +++.+.++++|++.+++..+.+........ .++|+++||+|++.+..+++
T Consensus       151 I~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~d~vld~~g~~~~~~~~~  229 (323)
T TIGR02823       151 VTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEK-ERWAGAVDTVGGHTLANVLA  229 (323)
T ss_pred             EEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcC-CCceEEEECccHHHHHHHHH
Confidence            9999999999999999999999888774 466788899999888876543322222222 35999999999888889999


Q ss_pred             ccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC--C---CHHHHHHHHHHHHCCceeEecceeeccccHHHHHH
Q 020314          238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS--P---KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWA  312 (327)
Q Consensus       238 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~  312 (327)
                      +++++|+++.+|.............+..++..+.+....  .   ....++.+.+++..+.+... ...|+++++++|++
T Consensus       230 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~  308 (323)
T TIGR02823       230 QLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-TREITLEELPEALE  308 (323)
T ss_pred             HhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHH
Confidence            999999999998643221111112222444444443221  1   12345667777778877654 45899999999999


Q ss_pred             HHhcCCCCccEEEeC
Q 020314          313 KSISGRATGKIIVEP  327 (327)
Q Consensus       313 ~~~~~~~~gkvvv~~  327 (327)
                      .+.+++..||+|+++
T Consensus       309 ~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       309 QILAGQHRGRTVVDV  323 (323)
T ss_pred             HHhCCCccceEEEeC
Confidence            999999999999864

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=3.4e-38  Score=282.68  Aligned_cols=305  Identities=23%  Similarity=0.319  Sum_probs=249.6

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||||++.+++.+   +++++.+.|++.+++|+||+.++++|+.|+....|.++    ..+|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~---~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~   73 (363)
T cd08279           1 MRAAVLHEVGKP---LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVT   73 (363)
T ss_pred             CeEEEEecCCCC---ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCcc
Confidence            799999988754   88899999999999999999999999999999888763    35678999999999999999999


Q ss_pred             CCCCCCEEEEE-----------------------------------------------ccCcccceeEeecCCceeeCCC
Q 020314           87 NFKVGDKVVAV-----------------------------------------------LSGGGLAEFAVAKESLTVARPQ  119 (327)
Q Consensus        87 ~~~~Gd~V~~~-----------------------------------------------~~~g~~a~~~~~~~~~~~~ip~  119 (327)
                      .+++||+|++.                                               ...|+|++|+.++++.++++|+
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~  153 (363)
T cd08279          74 GVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDD  153 (363)
T ss_pred             ccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCC
Confidence            99999999983                                               2358999999999999999999


Q ss_pred             CCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHHHHHhcC
Q 020314          120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIELVKSLG  197 (327)
Q Consensus       120 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~~~~~lg  197 (327)
                      ++++++++.+++++.+||+++....++     +++++|||+| +|++|++++++|+..|++ |++++++ ++.+.++.+|
T Consensus       154 ~~~~~~aa~~~~~~~ta~~~~~~~~~~-----~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g  227 (363)
T cd08279         154 DIPLDRAALLGCGVTTGVGAVVNTARV-----RPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFG  227 (363)
T ss_pred             CCChHHeehhcchhHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhC
Confidence            999999999999999999998777777     8999999996 699999999999999996 8887754 6777888999


Q ss_pred             CCEEEeCCCCC--cccccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCch-hHHHHhhhhccccceeeEEE
Q 020314          198 ADEVLDYKTPD--GAALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPR-VLLTFAWKKLTFSKKQLVPF  273 (327)
Q Consensus       198 ~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~  273 (327)
                      ++.+++++..+  ..+.+...++++|+++|++++ ..+..++++++++|+++.++.... ....+....+.++...+.+.
T Consensus       228 ~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  307 (363)
T cd08279         228 ATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGS  307 (363)
T ss_pred             CeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEE
Confidence            98888876544  223344456779999999995 457899999999999999875431 22223333334444444443


Q ss_pred             Ee--CCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEE
Q 020314          274 SV--SPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKII  324 (327)
Q Consensus       274 ~~--~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv  324 (327)
                      ..  ....+.++.++++++++.+.+  .+.+.|++++++++++.+.+++..+.++
T Consensus       308 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         308 LYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             EecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            22  134678899999999999875  3667899999999999999888765544

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=3.2e-38  Score=280.48  Aligned_cols=302  Identities=24%  Similarity=0.357  Sum_probs=244.0

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||+++++++++.   ..+++.+.|.+.++||+||+.++++|++|++...|..+    ...|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~~~~~---~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~   73 (338)
T PRK09422          1 MKAAVVNKDHTG---DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVT   73 (338)
T ss_pred             CeEEEecCCCCC---ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCc
Confidence            799999987762   22788899999999999999999999999999888753    13467899999999999999999


Q ss_pred             CCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           87 NFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        87 ~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      .+++||+|++.+                            .+|++++|+.++.+.++++|+++++++++.++.++.|||+
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~  153 (338)
T PRK09422         74 SLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYK  153 (338)
T ss_pred             cCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHH
Confidence            999999998621                            2589999999999999999999999999999999999999


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEec-CCcHHHHHhcCCCEEEeCCC-CC-cccccC
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL-GNTHVTATCG-ARNIELVKSLGADEVLDYKT-PD-GAALKS  214 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~-~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~-~~-~~~~~~  214 (327)
                      ++ ...++     +++++|||+| +|++|++++++|++ .|++++++++ +++++.++++|++.++++.. .+ .+.+..
T Consensus       154 ~~-~~~~~-----~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~  226 (338)
T PRK09422        154 AI-KVSGI-----KPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQE  226 (338)
T ss_pred             HH-HhcCC-----CCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHH
Confidence            98 67777     8999999999 79999999999998 5999999875 47888889999999888754 22 222222


Q ss_pred             CCCCcccE-EEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCc
Q 020314          215 PSGRKYDA-VINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       215 ~~~~~~d~-v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  293 (327)
                      ..+ ++|. ++++.++..+..++++++++|+++.+|..... ..+......++...+.+. ....++.++.+++++.++.
T Consensus       227 ~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~  303 (338)
T PRK09422        227 KTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPES-MDLSIPRLVLDGIEVVGS-LVGTRQDLEEAFQFGAEGK  303 (338)
T ss_pred             hcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCC-ceecHHHHhhcCcEEEEe-cCCCHHHHHHHHHHHHhCC
Confidence            222 6884 45555556689999999999999999854321 122223344455555552 2235678999999999999


Q ss_pred             eeEecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          294 LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       294 l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      +.+.+. .+++++++++++.+.++...||+++.
T Consensus       304 l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~  335 (338)
T PRK09422        304 VVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVID  335 (338)
T ss_pred             CCccEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence            876554 68999999999999999999999985

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.2e-38  Score=279.00  Aligned_cols=303  Identities=23%  Similarity=0.350  Sum_probs=246.4

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||||++++++    .+++.+.+.|.+.++||+|||.++++|+.|+....+.++.   ..+|.++|+|++|+|+++|++++
T Consensus         1 ~~a~~~~~~~----~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~   73 (337)
T cd08261           1 MKALVCEKPG----RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVA   73 (337)
T ss_pred             CeEEEEeCCC----ceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCC
Confidence            6899998754    3899999999999999999999999999999998887542   24578899999999999999999


Q ss_pred             CCCCCCEEEEE---------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAV---------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~---------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      .+++||+|++.                           ...|+|++|..++++ ++++|+++++++++.+ ..+.+++++
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~  151 (337)
T cd08261          74 GLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHA  151 (337)
T ss_pred             CCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHH
Confidence            99999999872                           236899999999999 9999999999999877 577888988


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPS  216 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~  216 (327)
                      + ...++     .++++|||+| +|.+|.+++++|+.+|++|+++++ +++.++++++|+++++++...+  ..+.+.+.
T Consensus       152 ~-~~~~l-----~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~  224 (337)
T cd08261         152 V-RRAGV-----TAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTD  224 (337)
T ss_pred             H-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhC
Confidence            8 67777     8999999996 799999999999999999998874 4677788899999999877654  23334455


Q ss_pred             CCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          217 GRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       217 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      ++++|++||++|+. .+..++++++++|+++.++..... .......+..+...+.+. .....+.++.++++++++.++
T Consensus       225 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~i~  302 (337)
T cd08261         225 GEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGP-VTFPDPEFHKKELTILGS-RNATREDFPDVIDLLESGKVD  302 (337)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCC-CccCHHHHHhCCCEEEEe-ccCChhhHHHHHHHHHcCCCC
Confidence            67799999999864 578889999999999998754321 111122223333444432 234567889999999999998


Q ss_pred             E--ecceeeccccHHHHHHHHhcCC-CCccEEEeC
Q 020314          296 T--VIDSKHSLSKAEDAWAKSISGR-ATGKIIVEP  327 (327)
Q Consensus       296 ~--~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~  327 (327)
                      +  .+...+++++++++++.+.+++ ..+|+|+++
T Consensus       303 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         303 PEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             hhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            7  6667899999999999999884 778999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=9.8e-38  Score=278.71  Aligned_cols=317  Identities=36%  Similarity=0.504  Sum_probs=249.8

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCC------------CCCCCCCeeeccc
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRP------------FLPRKFPFIPASD   73 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~------------~~~~~~p~~~G~e   73 (327)
                      |||++++++|++.+.+++++.+.|.| .++||+||++++++|++|++...|....            +....+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            78999998887544588899999988 4999999999999999999988874210            0013568899999


Q ss_pred             ceEEEEecCCCCCCCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCC
Q 020314           74 VAGEVIGLGSEVKNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDG  150 (327)
Q Consensus        74 ~~G~V~~vG~~~~~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~  150 (327)
                      ++|+|+.+|++++++++||||+++.   ..|+|++|+.++++.++++|+++++++++.+++++.++|+++.+...+.. .
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-~  159 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNP-K  159 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCC-c
Confidence            9999999999999999999999864   36999999999999999999999999999999999999999977766510 0


Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCC
Q 020314          151 SGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       151 ~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .++|++|+|+|++|++|++++++|+++|++|++++++++.+.++.+|.+.+++....+. ..+  ...+++|++||++|+
T Consensus       160 ~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l--~~~~~vd~vi~~~g~  237 (350)
T cd08248         160 NAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEEL--TERGKFDVILDTVGG  237 (350)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCcchHHHHHHhCCceEEECCChhHHHHH--HhcCCCCEEEECCCh
Confidence            02499999999999999999999999999999888667777888999988887655332 111  123579999999998


Q ss_pred             CcccccccccCCCcEEEeecCCchh---H--H--HHhhhhcccccee---------eEEEEeCCCHHHHHHHHHHHHCCc
Q 020314          230 IPWSTFEPNLGTTGKVIDFNPSPRV---L--L--TFAWKKLTFSKKQ---------LVPFSVSPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       230 ~~~~~~~~~l~~~G~~v~~g~~~~~---~--~--~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~  293 (327)
                      +....++++++++|+++.+|.....   .  .  ......+.+....         +.........+.+.++++++.++.
T Consensus       238 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  317 (350)
T cd08248         238 DTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGK  317 (350)
T ss_pred             HHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCC
Confidence            8888999999999999998743210   0  0  0000111111111         111112345678999999999999


Q ss_pred             eeEecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          294 LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       294 l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      +.+.+.+.|++++++++++.+.++...+|+++.
T Consensus       318 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         318 IKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             EecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            988888899999999999999988888898863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=4.7e-38  Score=282.20  Aligned_cols=307  Identities=18%  Similarity=0.178  Sum_probs=242.8

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      .+||+.++.+.++.   +++++.+.|++.++||+||+.++|+|++|++...|.+.    ..+|.++|||++|+|+++|++
T Consensus         6 ~~~~a~~~~~~~~~---~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~   78 (373)
T cd08299           6 IKCKAAVLWEPKKP---FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV----TPFPVILGHEAAGIVESVGEG   78 (373)
T ss_pred             ceeEEEEEecCCCC---cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC----CCCCccccccceEEEEEeCCC
Confidence            45899999876553   88999999999999999999999999999999988752    356889999999999999999


Q ss_pred             CCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCceee
Q 020314           85 VKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLTVA  116 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~~~  116 (327)
                      ++.+++||+|+...                                                ..|+|++|.+++++.+++
T Consensus        79 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~  158 (373)
T cd08299          79 VTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAK  158 (373)
T ss_pred             CccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceee
Confidence            99999999998751                                                248899999999999999


Q ss_pred             CCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHH
Q 020314          117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVK  194 (327)
Q Consensus       117 ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~  194 (327)
                      +|+++++++++.+++++.++|+++.+..++     +++++|+|+| +|++|++++++|+.+|+ +|+++++ +++++.++
T Consensus       159 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~-----~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~  232 (373)
T cd08299         159 IDAAAPLEKVCLIGCGFSTGYGAAVNTAKV-----TPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAK  232 (373)
T ss_pred             CCCCCChHHhheeccchHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            999999999999999999999998777777     8999999996 79999999999999999 7988874 47888889


Q ss_pred             hcCCCEEEeCCCCC----cccccCCCCCcccEEEeCCCCCc-ccccccc-cCCCcEEEeecCCchh-HHHHhhhhccccc
Q 020314          195 SLGADEVLDYKTPD----GAALKSPSGRKYDAVINCVTGIP-WSTFEPN-LGTTGKVIDFNPSPRV-LLTFAWKKLTFSK  267 (327)
Q Consensus       195 ~lg~~~v~~~~~~~----~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~-l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~  267 (327)
                      ++|++.+++..+.+    ..+.+.+. +++|+++||+|++. +..++.. ++++|+++.+|..... ...+... ...+.
T Consensus       233 ~lGa~~~i~~~~~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~  310 (373)
T cd08299         233 ELGATECINPQDYKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTG  310 (373)
T ss_pred             HcCCceEecccccchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcC
Confidence            99999988876432    12223333 57999999999644 6665654 4679999999854321 1112111 12234


Q ss_pred             eeeEEEEeC--CCHHHHHHHHHHHHCCce--eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          268 KQLVPFSVS--PKGENLDFLVKLVKEGKL--KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       268 ~~~~~~~~~--~~~~~~~~~~~~~~~g~l--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ..+.+....  .+.+.+.++++.+.++.+  ++.+.+.|++++++++++.+.+++. .|+++.+
T Consensus       311 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         311 RTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             CeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            455553332  234677778787777754  4457789999999999999987765 4777754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=6.4e-38  Score=279.13  Aligned_cols=303  Identities=25%  Similarity=0.352  Sum_probs=248.6

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||+|++++++.    +.+++.+.|++.+++|+||+.++++|+.|+....|.++   +...|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~----~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~   73 (343)
T cd08235           1 MKAAVLHGPND----VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVT   73 (343)
T ss_pred             CeEEEEecCCc----eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCC
Confidence            68999988764    88999999999999999999999999999999888753   124577999999999999999999


Q ss_pred             CCCCCCEEEEEc---------------------------cCcccceeEeecCCc-----eeeCCCCCChhhhcccCchHH
Q 020314           87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESL-----TVARPQEVSAAEGAGIPCAGL  134 (327)
Q Consensus        87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~-----~~~ip~~~~~~~aa~~~~~~~  134 (327)
                      .+++||+|+++.                           ..|+|++|+.++...     ++++|+++++.+++.+ .++.
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~  152 (343)
T cd08235          74 GFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA  152 (343)
T ss_pred             CCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence            999999999852                           358999999999998     9999999999999876 7888


Q ss_pred             HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCCc--c
Q 020314          135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKTPDG--A  210 (327)
Q Consensus       135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~--~  210 (327)
                      +||+++. ..++     +++++|+|+| +|++|++++++|+..|++ ++++++ +++.+.+..+|.+.++++++.+.  .
T Consensus       153 ~a~~~l~-~~~~-----~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~  225 (343)
T cd08235         153 CCINAQR-KAGI-----KPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEK  225 (343)
T ss_pred             HHHHHHH-hcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHH
Confidence            9999994 4477     8999999997 799999999999999998 877764 46777778899998888776552  2


Q ss_pred             cccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchh-HHHHhhhhccccceeeEEEEeCCCHHHHHHHHHH
Q 020314          211 ALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRV-LLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL  288 (327)
Q Consensus       211 ~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (327)
                      +.....++++|+++||+++. .+..++++++++|+++.++..... ...+....+.++..++.+. .....+.++.++++
T Consensus       226 i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~l  304 (343)
T cd08235         226 VRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGS-YAASPEDYKEALEL  304 (343)
T ss_pred             HHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEE-ecCChhhHHHHHHH
Confidence            33445667799999999965 578889999999999998854321 1222234455677766653 33456788999999


Q ss_pred             HHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          289 VKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       289 ~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      ++.+.++  +.+...|++++++++++.+.+++ .||+|+.
T Consensus       305 ~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         305 IASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             HHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence            9999986  34556899999999999999999 8999873

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=5.4e-38  Score=277.28  Aligned_cols=308  Identities=26%  Similarity=0.378  Sum_probs=249.2

Q ss_pred             EeccCCC-ccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCC
Q 020314           12 YDSYGGG-VAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKV   90 (327)
Q Consensus        12 ~~~~g~~-~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   90 (327)
                      ++.++.+ ++.+++++.+.|++.+++|+||+.++++|+.|...+.|....  ...+|.++|+|++|+|+++|++++++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~   80 (323)
T cd05282           3 YTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLV   80 (323)
T ss_pred             eCcCCCCccceEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCC
Confidence            3445542 236888898999999999999999999999999988776532  1246789999999999999999999999


Q ss_pred             CCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHH
Q 020314           91 GDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYA  170 (327)
Q Consensus        91 Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~  170 (327)
                      ||+|++....|+|++|+.++...++++|+++++.+++.+++.+.++|+++....++     .++++|||+|++|.+|+++
T Consensus        81 Gd~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~-----~~~~~vlI~g~~~~vg~~~  155 (323)
T cd05282          81 GQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKL-----PPGDWVIQNAANSAVGRML  155 (323)
T ss_pred             CCEEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccC-----CCCCEEEEcccccHHHHHH
Confidence            99999965479999999999999999999999999999999999999999777777     7899999999999999999


Q ss_pred             HHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEe
Q 020314          171 VQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVID  247 (327)
Q Consensus       171 ~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~  247 (327)
                      +++|+++|++++++++ +++.+.++++|++.++++...+  ..+.+.+.++++|+++||+|+.....++++++++|+++.
T Consensus       156 ~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~  235 (323)
T cd05282         156 IQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVN  235 (323)
T ss_pred             HHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEE
Confidence            9999999999998875 4677888899999988876544  234455667789999999998877788999999999999


Q ss_pred             ecCCchhHHHHhhhhccccceeeEEEEeCC-----C----HHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCC
Q 020314          248 FNPSPRVLLTFAWKKLTFSKKQLVPFSVSP-----K----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGR  318 (327)
Q Consensus       248 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~  318 (327)
                      +|........+....+..++..+.+.....     .    .+.++.+++++.++.+.+.+.+.|++++++++++.+.+++
T Consensus       236 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~  315 (323)
T cd05282         236 YGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPG  315 (323)
T ss_pred             EccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCC
Confidence            885432211111111122344444322211     1    2467889999999999877778899999999999999988


Q ss_pred             CCccEEEe
Q 020314          319 ATGKIIVE  326 (327)
Q Consensus       319 ~~gkvvv~  326 (327)
                      ..||++++
T Consensus       316 ~~~kvv~~  323 (323)
T cd05282         316 RGGKVLLT  323 (323)
T ss_pred             CCceEeeC
Confidence            88999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.8e-37  Score=275.35  Aligned_cols=311  Identities=32%  Similarity=0.451  Sum_probs=258.2

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||||+++..+. ++.+++++.+.|.+.++|++|++.++++|+.|++...|.++..  ...|.++|||++|+|+++|++++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~   77 (336)
T cd08276           1 MKAWRLSGGGG-LDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP--VKDPLIPLSDGAGEVVAVGEGVT   77 (336)
T ss_pred             CeEEEEeccCC-CcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC--CCCCcccccceeEEEEEeCCCCc
Confidence            79999987753 4668888888888999999999999999999999988876421  13678899999999999999999


Q ss_pred             CCCCCCEEEEEcc---------------------CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhC
Q 020314           87 NFKVGDKVVAVLS---------------------GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLG  145 (327)
Q Consensus        87 ~~~~Gd~V~~~~~---------------------~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~  145 (327)
                      ++++||+|++...                     .|+|++|..++.+.++++|+++++.+++.+++++.+||+++....+
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~  157 (336)
T cd08276          78 RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGP  157 (336)
T ss_pred             CCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcC
Confidence            9999999998641                     6889999999999999999999999999999999999999977777


Q ss_pred             CccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC-CC--cccccCCCCCccc
Q 020314          146 VKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT-PD--GAALKSPSGRKYD  221 (327)
Q Consensus       146 ~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~-~~--~~~~~~~~~~~~d  221 (327)
                      +     +++++|+|+| +|++|+++++++++.|+++++++++ ++.+.+..+|.+.+++... .+  ..+...++++++|
T Consensus       158 ~-----~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d  231 (336)
T cd08276         158 L-----KPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVD  231 (336)
T ss_pred             C-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCc
Confidence            7     8999999996 8999999999999999999988854 6777787889998888765 33  2344456667899


Q ss_pred             EEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEeccee
Q 020314          222 AVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSK  301 (327)
Q Consensus       222 ~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~  301 (327)
                      +++|++++.....++++++++|+++.+|................++..+.+.. ......++++++++.++.+.+.....
T Consensus       232 ~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~l~~~~~~~  310 (336)
T cd08276         232 HVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIA-VGSRAQFEAMNRAIEAHRIRPVIDRV  310 (336)
T ss_pred             EEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEe-cCcHHHHHHHHHHHHcCCcccccCcE
Confidence            99999997778899999999999999986543221222334455666666643 23467888999999999888777788


Q ss_pred             eccccHHHHHHHHhcCCCCccEEEeC
Q 020314          302 HSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       302 ~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++++++++.+.+++..||+++++
T Consensus       311 ~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         311 FPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             EeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.1e-37  Score=274.86  Aligned_cols=307  Identities=27%  Similarity=0.299  Sum_probs=245.5

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||++++...+. ++.+++.+.+.|.+.++||+||+.++++|+.|++...|..+   ....|.++|||++|+|+++|.  .
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~   74 (320)
T cd08243           1 MKAIVIEQPGG-PEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--G   74 (320)
T ss_pred             CeEEEEcCCCC-ccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--C
Confidence            68999987664 45678888888889999999999999999999998888653   124578899999999999995  5


Q ss_pred             CCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE
Q 020314           87 NFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT  160 (327)
Q Consensus        87 ~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~  160 (327)
                      .+++||+|+++.      .+|+|++|+.++...++++|+++++++++.++.++.+||+++.+..++     +++++|||+
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~-----~~g~~vlV~  149 (320)
T cd08243          75 TFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGL-----QPGDTLLIR  149 (320)
T ss_pred             CCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCC-----CCCCEEEEE
Confidence            799999999864      248999999999999999999999999999999999999999877777     889999999


Q ss_pred             cCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccccccccc
Q 020314          161 AASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNL  239 (327)
Q Consensus       161 g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l  239 (327)
                      |++|++|++++++|++.|++|+++++ +++.+.++++|++.+++........+... ++++|+++|++|+..+..+++++
T Consensus       150 ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~~d~vl~~~~~~~~~~~~~~l  228 (320)
T cd08243         150 GGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAA-PGGFDKVLELVGTATLKDSLRHL  228 (320)
T ss_pred             cCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHh-CCCceEEEECCChHHHHHHHHHh
Confidence            99999999999999999999998885 46778888899988875432112222222 57899999999987788999999


Q ss_pred             CCCcEEEeecCCchhHH--HHhhhhc--cccceeeEEEEe-CCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314          240 GTTGKVIDFNPSPRVLL--TFAWKKL--TFSKKQLVPFSV-SPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS  314 (327)
Q Consensus       240 ~~~G~~v~~g~~~~~~~--~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~  314 (327)
                      +++|+++.+|.......  .......  ..++..+.+... ......++.++++++.+.+++.+.+.|++++++++++.+
T Consensus       229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~  308 (320)
T cd08243         229 RPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAYM  308 (320)
T ss_pred             ccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHHHHHHHHHHH
Confidence            99999999985321100  0000111  123333333221 122456888999999999987777889999999999999


Q ss_pred             hcCCCCccEEE
Q 020314          315 ISGRATGKIIV  325 (327)
Q Consensus       315 ~~~~~~gkvvv  325 (327)
                      .+++..||+++
T Consensus       309 ~~~~~~~kvvv  319 (320)
T cd08243         309 ESNRAFGKVVV  319 (320)
T ss_pred             HhCCCCCcEEe
Confidence            99988899886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=9.3e-38  Score=276.50  Aligned_cols=310  Identities=32%  Similarity=0.413  Sum_probs=248.7

Q ss_pred             ceEEEEEeccCCC-ccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            6 VMHAVQYDSYGGG-VAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         6 ~~~a~~~~~~g~~-~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      +||+|++.++++. ++.+++++.+.|.+.++||+||+.++|+|+.|++...|.++..  ..+|.++|+|++|+|+.+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~~   78 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGEG   78 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECCC
Confidence            5999999997752 4668899999999999999999999999999999988875321  256789999999999999999


Q ss_pred             CCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCC
Q 020314           85 VKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASG  164 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g  164 (327)
                      ++.+++||+|++. ..|+|++|++++.+.++++|++  ..+++.++.++.+||+++.+..++     +++++++|+|++|
T Consensus        79 v~~~~~Gd~V~~~-~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~-----~~~~~vlI~ga~g  150 (329)
T cd08250          79 VTDFKVGDAVATM-SFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEM-----KSGETVLVTAAAG  150 (329)
T ss_pred             CCCCCCCCEEEEe-cCcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCC-----CCCCEEEEEeCcc
Confidence            9999999999984 4689999999999999999997  356788899999999999877777     8999999999999


Q ss_pred             hHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCCCcccccccccCCC
Q 020314          165 AVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTT  242 (327)
Q Consensus       165 ~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~  242 (327)
                      .+|++++++|+..|+++++++++ ++.+.++++|++.+++....+. ..+....++++|++||++|+..+..++++++++
T Consensus       151 ~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~  230 (329)
T cd08250         151 GTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALK  230 (329)
T ss_pred             HHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccC
Confidence            99999999999999999988854 6777888899988887665442 222222346799999999987788999999999


Q ss_pred             cEEEeecCCchh----------HHHHhhhhccccceeeEEEEeCC----CHHHHHHHHHHHHCCceeEe--cceeecccc
Q 020314          243 GKVIDFNPSPRV----------LLTFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKLKTV--IDSKHSLSK  306 (327)
Q Consensus       243 G~~v~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~--~~~~~~~~~  306 (327)
                      |+++.+|.....          ...+ ......++..+.+.....    ..+.+..+++++.++.+.+.  ..+.+++++
T Consensus       231 g~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  309 (329)
T cd08250         231 GRLIVIGFISGYQSGTGPSPVKGATL-PPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLES  309 (329)
T ss_pred             CeEEEEecccCCcccCcccccccccc-cHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHH
Confidence            999999854321          0011 111223334444432211    24567889999999998863  345699999


Q ss_pred             HHHHHHHHhcCCCCccEEEe
Q 020314          307 AEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       307 ~~~a~~~~~~~~~~gkvvv~  326 (327)
                      +++|++.+.+++..||++++
T Consensus       310 ~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         310 VADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHcCCCCceEEeC
Confidence            99999999998888999874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.7e-38  Score=278.87  Aligned_cols=304  Identities=23%  Similarity=0.326  Sum_probs=241.3

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCC------CCCCCCeeecccceEEEEe
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF------LPRKFPFIPASDVAGEVIG   80 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~------~~~~~p~~~G~e~~G~V~~   80 (327)
                      |||+++.++++    +++++.+.|++.+++|+||+.++|+|+.|++...|.....      ....+|..+|||++|+|++
T Consensus         1 mka~~~~~~~~----~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~   76 (350)
T cd08256           1 MRAVVCHGPQD----YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE   76 (350)
T ss_pred             CeeEEEecCCc----eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEE
Confidence            68999986654    8999999999999999999999999999999888863110      0114577899999999999


Q ss_pred             cCCCCC--CCCCCCEEEEE--------------------------c---cCcccceeEeecCC-ceeeCCCCCChhhhcc
Q 020314           81 LGSEVK--NFKVGDKVVAV--------------------------L---SGGGLAEFAVAKES-LTVARPQEVSAAEGAG  128 (327)
Q Consensus        81 vG~~~~--~~~~Gd~V~~~--------------------------~---~~g~~a~~~~~~~~-~~~~ip~~~~~~~aa~  128 (327)
                      +|++++  ++++||+|++.                          .   ..|+|++|+.++++ .++++|+++++++++.
T Consensus        77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~  156 (350)
T cd08256          77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL  156 (350)
T ss_pred             eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence            999998  99999999872                          1   36899999999988 5789999999999998


Q ss_pred             cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCC
Q 020314          129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~  206 (327)
                      + .++.++|+++ +..++     +++++|+|.| +|++|++++++|+++|++ ++++++ +++.++++++|++.++++..
T Consensus       157 ~-~~~~ta~~a~-~~~~~-----~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~  228 (350)
T cd08256         157 I-EPLACALHAV-DRANI-----KFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPE  228 (350)
T ss_pred             h-hHHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCC
Confidence            8 8889999998 77777     8999999954 799999999999999985 455554 46778889999998888765


Q ss_pred             CC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhc-cccceeeEEEEeCCCHHHH
Q 020314          207 PD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKL-TFSKKQLVPFSVSPKGENL  282 (327)
Q Consensus       207 ~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  282 (327)
                      .+  ..+.+.+.+.++|++||++|+. .+..++++++++|+++.+|..... ..+....+ ..+++.+.+..  .....+
T Consensus       229 ~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~--~~~~~~  305 (350)
T cd08256         229 VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP-VTVDWSIIGDRKELDVLGSH--LGPYCY  305 (350)
T ss_pred             cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC-CccChhHhhcccccEEEEec--cCchhH
Confidence            44  2344455667899999999964 578899999999999999854321 11111111 23344444422  223468


Q ss_pred             HHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          283 DFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       283 ~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      ++++++++++.+++  .+.+.|+++++++|++.+++++..+|+++
T Consensus       306 ~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         306 PIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             HHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            88999999999986  36788999999999999999988888874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.4e-37  Score=276.34  Aligned_cols=308  Identities=28%  Similarity=0.406  Sum_probs=255.2

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||++++.+++++ . +.+++.+.|.+.+++|+|++.++++|+.|+....|.++.  ...+|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~~~~~g~~~~G~v~~~G~~v~   76 (338)
T cd08254           1 MKAWRFHKGSKG-L-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPT--LTKLPLTLGHEIAGTVVEVGAGVT   76 (338)
T ss_pred             CeeEEEecCCCC-c-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcc--cCCCCEeccccccEEEEEECCCCc
Confidence            799999988873 3 688888988999999999999999999999999887641  235678999999999999999999


Q ss_pred             CCCCCCEEEE------------------Ec---------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVA------------------VL---------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~------------------~~---------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      ++++||+|++                  ++         ..|+|++|+.++.+.++++|+++++.+++.++.++.+||++
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~  156 (338)
T cd08254          77 NFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHA  156 (338)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence            9999999986                  11         25899999999999999999999999999999999999999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc-ccccCCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG-AALKSPSG  217 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~  217 (327)
                      +.+..++     +++++|||.| +|++|++++++|+..|++|++++++ ++.+.++++|.+.+++..+... .......+
T Consensus       157 l~~~~~~-----~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  230 (338)
T cd08254         157 VVRAGEV-----KPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLG  230 (338)
T ss_pred             HHhccCC-----CCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcC
Confidence            9777777     8899999976 7999999999999999999888754 6777888899988887665442 22244566


Q ss_pred             CcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE
Q 020314          218 RKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT  296 (327)
Q Consensus       218 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~  296 (327)
                      +++|+++||+|.. .+..++++|+++|+++.+|..... ..+....+..++..+.+ +.....+.++.++++++++.+.+
T Consensus       231 ~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~~l~~  308 (338)
T cd08254         231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDK-LTVDLSDLIARELRIIG-SFGGTPEDLPEVLDLIAKGKLDP  308 (338)
T ss_pred             CCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCC-CccCHHHHhhCccEEEE-eccCCHHHHHHHHHHHHcCCCcc
Confidence            7899999999855 588899999999999999854321 11222344455555555 33445778899999999999886


Q ss_pred             ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          297 VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       297 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      . .+.+++++++++++.+.+++..||+|++|
T Consensus       309 ~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         309 Q-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             c-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            6 57899999999999999999999999876

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=6.6e-38  Score=280.79  Aligned_cols=302  Identities=20%  Similarity=0.225  Sum_probs=246.9

Q ss_pred             EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314            8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN   87 (327)
Q Consensus         8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   87 (327)
                      ||+++.+++..   +++++.+.|.+.+++|+||+.++++|+.|++...|.++    ..+|.++|||++|+|+++|+++++
T Consensus         2 ~a~~~~~~~~~---~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~   74 (365)
T cd05279           2 KAAVLWEKGKP---LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTT   74 (365)
T ss_pred             ceeEEecCCCC---cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCccc
Confidence            68888877654   88999999999999999999999999999999888753    346789999999999999999999


Q ss_pred             CCCCCEEEEEc------------------------------------------------cCcccceeEeecCCceeeCCC
Q 020314           88 FKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLTVARPQ  119 (327)
Q Consensus        88 ~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~~~ip~  119 (327)
                      +++||+|++..                                                ..|+|++|+.++++.++++|+
T Consensus        75 ~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~  154 (365)
T cd05279          75 LKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDP  154 (365)
T ss_pred             CCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCC
Confidence            99999998752                                                136899999999999999999


Q ss_pred             CCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEe-cCCcHHHHHhcC
Q 020314          120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATC-GARNIELVKSLG  197 (327)
Q Consensus       120 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~-~~~~~~~~~~lg  197 (327)
                      ++++++++.+.+++.++|+++....++     +++++|||+| +|++|++++++|+++|++ ++++. ++++.+.++++|
T Consensus       155 ~~~~~~a~~~~~~~~ta~~al~~~~~~-----~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g  228 (365)
T cd05279         155 DAPLEKVCLIGCGFSTGYGAAVNTAKV-----TPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLG  228 (365)
T ss_pred             CCCHHHhhHhccchhHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC
Confidence            999999999999999999998777777     8999999996 799999999999999995 66666 457888889999


Q ss_pred             CCEEEeCCCC--C--cccccCCCCCcccEEEeCCCC-CcccccccccC-CCcEEEeecCCc-hhHHHHhhhhccccceee
Q 020314          198 ADEVLDYKTP--D--GAALKSPSGRKYDAVINCVTG-IPWSTFEPNLG-TTGKVIDFNPSP-RVLLTFAWKKLTFSKKQL  270 (327)
Q Consensus       198 ~~~v~~~~~~--~--~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~  270 (327)
                      ++.+++..+.  +  ..+.+.+ ++++|+++|++|. ..+..++++++ ++|+++.+|... .....+....+ .+...+
T Consensus       229 ~~~~v~~~~~~~~~~~~l~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l  306 (365)
T cd05279         229 ATECINPRDQDKPIVEVLTEMT-DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTI  306 (365)
T ss_pred             CCeecccccccchHHHHHHHHh-CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeE
Confidence            9998887655  3  1233334 4689999999985 55888999999 999999988542 22233333344 455556


Q ss_pred             EEEEe--CCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          271 VPFSV--SPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       271 ~~~~~--~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      .+.+.  ....+.+..++++++++.++.  .+.++++++++++|++.+.+++.. |+++
T Consensus       307 ~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         307 KGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             EEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            55332  235678899999999999874  577889999999999999887664 6654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=9e-38  Score=278.27  Aligned_cols=303  Identities=23%  Similarity=0.315  Sum_probs=244.7

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCC-CCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPN-KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~-~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      ||+|++..++    .+++++.+.|+|. ++||+||+.++++|+.|++...|.++    ..+|.++|+|++|+|+++|+++
T Consensus         1 ~~a~~~~~~~----~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v   72 (344)
T cd08284           1 MKAVVFKGPG----DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEV   72 (344)
T ss_pred             CeeEEEecCC----CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCc
Confidence            6899997653    4999999999975 99999999999999999999888753    2457899999999999999999


Q ss_pred             CCCCCCCEEEEEc-------------------------------cCcccceeEeecCC--ceeeCCCCCChhhhcccCch
Q 020314           86 KNFKVGDKVVAVL-------------------------------SGGGLAEFAVAKES--LTVARPQEVSAAEGAGIPCA  132 (327)
Q Consensus        86 ~~~~~Gd~V~~~~-------------------------------~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa~~~~~  132 (327)
                      +++++||+|++..                               .+|++++|+.++++  .++++|+++++++++.++.+
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~  152 (344)
T cd08284          73 RTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI  152 (344)
T ss_pred             cccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence            9999999999753                               14899999999975  99999999999999999999


Q ss_pred             HHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCC--
Q 020314          133 GLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPD--  208 (327)
Q Consensus       133 ~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--  208 (327)
                      ++|||+++. ..++     .++++|||+| +|++|++++++|+.+|+ +++++++. ++.++++++|+. .++.+..+  
T Consensus       153 ~~ta~~~~~-~~~~-----~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~  224 (344)
T cd08284         153 LPTGYFGAK-RAQV-----RPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEPV  224 (344)
T ss_pred             hHHHHhhhH-hcCC-----ccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHH
Confidence            999999995 4666     7899999997 79999999999999997 88888644 677788889975 45554433  


Q ss_pred             cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHH
Q 020314          209 GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVK  287 (327)
Q Consensus       209 ~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (327)
                      ..+.+.+.++++|++||++++. .+..++++++++|+++.+|................++..+.. ......+.++.+++
T Consensus       225 ~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  303 (344)
T cd08284         225 ERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRF-GRCPVRSLFPELLP  303 (344)
T ss_pred             HHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEE-ecCCcchhHHHHHH
Confidence            2344455667899999999964 588999999999999999865422222222223334444443 22345678999999


Q ss_pred             HHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          288 LVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       288 ~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++.+.+  ++.+.+++++++++++.+.+++. ||+|+.+
T Consensus       304 ~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~~  344 (344)
T cd08284         304 LLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLDP  344 (344)
T ss_pred             HHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEecC
Confidence            999999875  46678999999999999998887 9999864

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=9.6e-38  Score=277.68  Aligned_cols=307  Identities=22%  Similarity=0.301  Sum_probs=241.4

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||+|++.++++   .+++.+.+.|.+.++||+||++++++|++|++++.+.........+|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~---~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~   77 (341)
T PRK05396          1 MKALVKLKAEP---GLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVT   77 (341)
T ss_pred             CceEEEecCCC---ceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCC
Confidence            68999987664   499999999999999999999999999999998766421111124577899999999999999999


Q ss_pred             CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      ++++||+|++..                           .+|+|++|+.++.+.++++|+++++++++.+ .++.+++++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~  156 (341)
T PRK05396         78 GFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHT  156 (341)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHH
Confidence            999999998752                           3689999999999999999999999888754 565666665


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSP  215 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~  215 (327)
                      +..  ..     .+|++|+|.| +|++|++++++|+++|+ +++++.+ +++.+.++++|++.++++++.+  ..+...+
T Consensus       157 ~~~--~~-----~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  228 (341)
T PRK05396        157 ALS--FD-----LVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELG  228 (341)
T ss_pred             HHc--CC-----CCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhc
Confidence            532  22     5899999987 79999999999999999 5777763 4677888999999998877654  2233445


Q ss_pred             CCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC-c
Q 020314          216 SGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG-K  293 (327)
Q Consensus       216 ~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~  293 (327)
                      .++++|++|||.|+. .+..++++++++|+++.+|..... ..+....+.++.+.+.++......+.+..+++++.++ +
T Consensus       229 ~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  307 (341)
T PRK05396        229 MTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD-MAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLD  307 (341)
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-CcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCC
Confidence            567899999999864 478899999999999999864321 1222356666777776643222334566788889888 4


Q ss_pred             eeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          294 LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       294 l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +.+.+.+.+++++++++++.+.+++ .||+++++
T Consensus       308 ~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        308 LSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             hhHheEEEEeHHHHHHHHHHHhcCC-CceEEEec
Confidence            5556668899999999999999877 79999863

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.3e-37  Score=275.71  Aligned_cols=305  Identities=23%  Similarity=0.281  Sum_probs=244.8

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      ||+++++++++    +++++.+.|+| .++||+||++++++|+.|+..+.|.++.   ..+|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~~~----~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v   73 (345)
T cd08286           1 MKALVYHGPGK----ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAV   73 (345)
T ss_pred             CceEEEecCCc----eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCc
Confidence            78999987654    89999999885 8999999999999999999999887642   2447899999999999999999


Q ss_pred             CCCCCCCEEEEEc----------------------------cCcccceeEeecCC--ceeeCCCCCChhhhcccCchHHH
Q 020314           86 KNFKVGDKVVAVL----------------------------SGGGLAEFAVAKES--LTVARPQEVSAAEGAGIPCAGLT  135 (327)
Q Consensus        86 ~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~t  135 (327)
                      +.+++||+|+...                            .+|+|++|+.++.+  .++++|++++..+++.++..+++
T Consensus        74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t  153 (345)
T cd08286          74 TNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT  153 (345)
T ss_pred             cccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence            9999999998743                            13889999999987  89999999999999999999999


Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--ccc
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNIELVKSLGADEVLDYKTPD--GAA  211 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~  211 (327)
                      ||+++....++     .++++|||.| +|.+|.+++|+|+.+| .+++++.++ ++.++++++|++.++++.+.+  ..+
T Consensus       154 a~~~~~~~~~~-----~~g~~vlI~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i  227 (345)
T cd08286         154 GYECGVLNGKV-----KPGDTVAIVG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQV  227 (345)
T ss_pred             HHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHH
Confidence            99987677777     8899999987 6999999999999999 688887644 577888899999998876544  223


Q ss_pred             ccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHH
Q 020314          212 LKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVK  290 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (327)
                      ...+.++++|++|||+|+. .+..++++++++|+++.+|..... ..+....+..++..+.+..  ...+.++.++++++
T Consensus       228 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  304 (345)
T cd08286         228 LELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKP-VDLHLEKLWIKNITITTGL--VDTNTTPMLLKLVS  304 (345)
T ss_pred             HHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCC-CCcCHHHHhhcCcEEEeec--CchhhHHHHHHHHH
Confidence            4445667899999999864 477888999999999999854321 2222222233444444321  12356888999999


Q ss_pred             CCceeE--ecceeeccccHHHHHHHHhcCCC--CccEEEeC
Q 020314          291 EGKLKT--VIDSKHSLSKAEDAWAKSISGRA--TGKIIVEP  327 (327)
Q Consensus       291 ~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~--~gkvvv~~  327 (327)
                      .+.+++  ++.++|++++++++++.+.....  ..|++|+|
T Consensus       305 ~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         305 SGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             cCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            999875  35688999999999999987643  34999875

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2e-37  Score=275.74  Aligned_cols=305  Identities=20%  Similarity=0.248  Sum_probs=243.4

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCC--------CCCCCCCeeecccceEEE
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP--------FLPRKFPFIPASDVAGEV   78 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~--------~~~~~~p~~~G~e~~G~V   78 (327)
                      |||+++.+.     .+++++.+.|++.++||+||+.++++|+.|++...|....        .....+|.++|+|++|+|
T Consensus         1 m~a~~~~~~-----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   75 (341)
T cd08262           1 MRAAVFRDG-----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV   75 (341)
T ss_pred             CceEEEeCC-----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEE
Confidence            689999754     3999999999999999999999999999999998873210        011245789999999999


Q ss_pred             EecCCCCCC-CCCCCEEEEEc-----------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHH
Q 020314           79 IGLGSEVKN-FKVGDKVVAVL-----------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQAL  140 (327)
Q Consensus        79 ~~vG~~~~~-~~~Gd~V~~~~-----------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al  140 (327)
                      +++|+++++ +++||+|++.+                 ..|+|++|+.++.+.++++|+++++++++ ++.++.+||+++
T Consensus        76 ~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~  154 (341)
T cd08262          76 VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV  154 (341)
T ss_pred             EEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH
Confidence            999999987 99999999863                 46899999999999999999999999877 667888999986


Q ss_pred             HHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeE-EEEe-cCCcHHHHHhcCCCEEEeCCCCCc-----cccc
Q 020314          141 TQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV-TATC-GARNIELVKSLGADEVLDYKTPDG-----AALK  213 (327)
Q Consensus       141 ~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v-~~~~-~~~~~~~~~~lg~~~v~~~~~~~~-----~~~~  213 (327)
                       ...++     +++++|||+| +|++|.+++|+|+.+|+++ +++. ++++.++++++|++.+++++..+.     ....
T Consensus       155 -~~~~~-----~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~  227 (341)
T cd08262         155 -RRARL-----TPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELA  227 (341)
T ss_pred             -HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHH
Confidence             77777     8999999997 6999999999999999974 4444 346788889999988888765431     1233


Q ss_pred             CCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC
Q 020314          214 SPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG  292 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  292 (327)
                      ...++++|+++|++|+. .+..++++++++|+++.+|....... .......+++.++.+ +.....+.+++++++++++
T Consensus       228 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g  305 (341)
T cd08262         228 RAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDN-IEPALAIRKELTLQF-SLGYTPEEFADALDALAEG  305 (341)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCc-cCHHHHhhcceEEEE-EecccHHHHHHHHHHHHcC
Confidence            45567899999999874 57888999999999999985422111 111111345555554 3334566889999999999


Q ss_pred             ceeE--ecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          293 KLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       293 ~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      .+.+  .+.+.+++++++++++.+.+++..||+|++
T Consensus       306 ~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         306 KVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             CCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            9875  446789999999999999999999999975

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=3.7e-37  Score=276.95  Aligned_cols=302  Identities=23%  Similarity=0.292  Sum_probs=240.5

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      ||+|++.+++    .+++++.++|.+ .++||+||+.++++|+.|++...|.++    ..+|.++|||++|+|+++|+++
T Consensus         1 m~~~~~~~~~----~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v   72 (375)
T cd08282           1 MKAVVYGGPG----NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAV   72 (375)
T ss_pred             CceEEEecCC----ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCC
Confidence            6899997654    499999999985 799999999999999999999988764    2468899999999999999999


Q ss_pred             CCCCCCCEEEEEc-------------------------------------cCcccceeEeecCC--ceeeCCCCCChh--
Q 020314           86 KNFKVGDKVVAVL-------------------------------------SGGGLAEFAVAKES--LTVARPQEVSAA--  124 (327)
Q Consensus        86 ~~~~~Gd~V~~~~-------------------------------------~~g~~a~~~~~~~~--~~~~ip~~~~~~--  124 (327)
                      +.+++||+|++..                                     .+|+|++|+.++..  .++++|++++++  
T Consensus        73 ~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~  152 (375)
T cd08282          73 ESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK  152 (375)
T ss_pred             CcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence            9999999998621                                     13889999999976  899999999998  


Q ss_pred             -hhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEE
Q 020314          125 -EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEV  201 (327)
Q Consensus       125 -~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v  201 (327)
                       +++.++.++.++|+++ ...++     ++|++|+|.| +|++|++++++|++.|+ +++++++ +++.++++++|++ .
T Consensus       153 ~~~a~~~~~~~ta~~a~-~~~~~-----~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~  224 (375)
T cd08282         153 DDYLMLSDIFPTGWHGL-ELAGV-----QPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-P  224 (375)
T ss_pred             hheeeecchHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-E
Confidence             5677888899999999 77777     8999999976 79999999999999998 7888764 4678888999984 5


Q ss_pred             EeCCCCC--cccccCCCCCcccEEEeCCCCCc------------ccccccccCCCcEEEeecCCchh------------H
Q 020314          202 LDYKTPD--GAALKSPSGRKYDAVINCVTGIP------------WSTFEPNLGTTGKVIDFNPSPRV------------L  255 (327)
Q Consensus       202 ~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~------------~  255 (327)
                      +++.+.+  ..+.+.+. +++|+++||+|++.            +..++++++++|+++.+|.....            .
T Consensus       225 v~~~~~~~~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~  303 (375)
T cd08282         225 IDFSDGDPVEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGE  303 (375)
T ss_pred             eccCcccHHHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCcc
Confidence            5665443  22333344 57999999999764            67888999999999877643211            0


Q ss_pred             HHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          256 LTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ..+....+..+...+.+ .....++.++.++++++++.+++  .+.+.|++++++++++.+.+++ .+|+|+++
T Consensus       304 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         304 LSFDFGLLWAKGLSFGT-GQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             ccccHHHHHhcCcEEEE-ecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            11122223333443433 22335677889999999999986  4778999999999999999988 89999864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=1.3e-36  Score=271.57  Aligned_cols=313  Identities=26%  Similarity=0.421  Sum_probs=242.7

Q ss_pred             eEEEEEeccCCCccceEEeeccCCC-CCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPT-PNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~-~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      .|+|++.+++++ ..++..+.+.|. +.+++|+||+.++++|+.|+....+....  ....|.++|+|++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~V~~vG~~v   77 (352)
T cd08247           1 YKALTFKNNTSP-LTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFH--FKVKEKGLGRDYSGVIVKVGSNV   77 (352)
T ss_pred             CceEEEecCCCc-ceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccc--cccCCCccCceeEEEEEEeCccc
Confidence            378999988864 444444444443 48999999999999999999887543211  11247789999999999999999


Q ss_pred             C-CCCCCCEEEEEc-----cCcccceeEeecCC----ceeeCCCCCChhhhcccCchHHHHHHHHHHhh-CCccCCCCCC
Q 020314           86 K-NFKVGDKVVAVL-----SGGGLAEFAVAKES----LTVARPQEVSAAEGAGIPCAGLTAHQALTQSL-GVKLDGSGQQ  154 (327)
Q Consensus        86 ~-~~~~Gd~V~~~~-----~~g~~a~~~~~~~~----~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~-~~~~~~~~~~  154 (327)
                      + .+++||+|+++.     ..|+|++|++++..    .++++|+++++.+++.++.++.|||+++.+.. ++     ++|
T Consensus        78 ~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~-----~~g  152 (352)
T cd08247          78 ASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKL-----GPD  152 (352)
T ss_pred             ccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhcc-----CCC
Confidence            8 899999999865     26899999999987    78999999999999999999999999997666 67     899


Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CC-eEEEEecCCcHHHHHhcCCCEEEeCCCCC-----cccccCCC-CCcccEEEeC
Q 020314          155 KNILITAASGAVGLYAVQLAKLG-NT-HVTATCGARNIELVKSLGADEVLDYKTPD-----GAALKSPS-GRKYDAVINC  226 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~-g~-~v~~~~~~~~~~~~~~lg~~~v~~~~~~~-----~~~~~~~~-~~~~d~v~d~  226 (327)
                      ++|+|+|+++++|++++++|+.. |. .++++.+.++.+.++++|++.+++.++.+     ...++... ++++|++|||
T Consensus       153 ~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~  232 (352)
T cd08247         153 SKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDC  232 (352)
T ss_pred             CeEEEECCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEEC
Confidence            99999999999999999999987 45 67777666666677899999888876543     12333333 6789999999


Q ss_pred             CCC-CcccccccccC---CCcEEEeecCCchh-----H----------HHHhhhhccccceeeEEEEeCCCHHHHHHHHH
Q 020314          227 VTG-IPWSTFEPNLG---TTGKVIDFNPSPRV-----L----------LTFAWKKLTFSKKQLVPFSVSPKGENLDFLVK  287 (327)
Q Consensus       227 ~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~-----~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (327)
                      +|+ .....++++++   ++|+++.++.....     .          .........+...++.........+.++.+++
T Consensus       233 ~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (352)
T cd08247         233 VGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAE  312 (352)
T ss_pred             CCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHH
Confidence            998 45778889999   99999987432110     0          01112233344444433222233467888999


Q ss_pred             HHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          288 LVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       288 ~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++.++.+++.+.+.+++++++++++.+++++..||+++++
T Consensus       313 ~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         313 LIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             HHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            9999999887778999999999999999999899999864

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.9e-36  Score=267.49  Aligned_cols=312  Identities=33%  Similarity=0.490  Sum_probs=256.7

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.++++ .+++++++.+.|++.+++|+||+.++++|+.|+....+....   ...|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~   76 (325)
T cd08271           1 MKAWVLPKPGA-ALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVT   76 (325)
T ss_pred             CeeEEEccCCC-cceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCC
Confidence            79999998773 345999999999999999999999999999999988776531   12367899999999999999999


Q ss_pred             CCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCC
Q 020314           87 NFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS  163 (327)
Q Consensus        87 ~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~  163 (327)
                      ++++||+|++..   ..|+|++|+.++.+.++++|+++++.+++.+.+++.++++++.+..++     +++++++|+|++
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~-----~~g~~vlI~g~~  151 (325)
T cd08271          77 GWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRI-----EAGRTILITGGA  151 (325)
T ss_pred             cCCCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCC-----CCCCEEEEECCc
Confidence            999999999864   478999999999999999999999999999999999999999887877     899999999988


Q ss_pred             ChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314          164 GAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT  241 (327)
Q Consensus       164 g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~  241 (327)
                      +++|++++++++..|++++.+.++++.+.+..+|.+.+++.....  ..+.....++++|++++++++.....+++++++
T Consensus       152 ~~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~  231 (325)
T cd08271         152 GGVGSFAVQLAKRAGLRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAF  231 (325)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEEcHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhcc
Confidence            999999999999999998887765677777889998888766544  223444556789999999998777778999999


Q ss_pred             CcEEEeecCCchh-HHHHhhhhccccceeeEEEEeCC-------CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHH
Q 020314          242 TGKVIDFNPSPRV-LLTFAWKKLTFSKKQLVPFSVSP-------KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAK  313 (327)
Q Consensus       242 ~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~  313 (327)
                      +|+++.++..... ........+.++...+.......       ..+.+..+++++.++.+.+...+.++++++.++++.
T Consensus       232 ~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~  311 (325)
T cd08271         232 NGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRA  311 (325)
T ss_pred             CCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHH
Confidence            9999998744221 11222345566666655432211       124567788999999998777788999999999999


Q ss_pred             HhcCCCCccEEEeC
Q 020314          314 SISGRATGKIIVEP  327 (327)
Q Consensus       314 ~~~~~~~gkvvv~~  327 (327)
                      +.++...+|+++++
T Consensus       312 ~~~~~~~~kiv~~~  325 (325)
T cd08271         312 LKDRHTRGKIVVTI  325 (325)
T ss_pred             HHcCCccceEEEEC
Confidence            99988889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.8e-37  Score=272.96  Aligned_cols=298  Identities=31%  Similarity=0.476  Sum_probs=238.4

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||++++..++  .+.+++++.+.|++.++||+||+.++++|++|++...+..    ...+|..+|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~   74 (325)
T cd08264           1 MKALVFEKSG--IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVK   74 (325)
T ss_pred             CeeEEeccCC--CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCC
Confidence            6899997655  3558888888888999999999999999999998876421    123577899999999999999999


Q ss_pred             CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      ++++||+|+...                           ..|+|++|.+++++.++++|+++++++++.+++++.+||++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  154 (325)
T cd08264          75 GVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA  154 (325)
T ss_pred             CCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHH
Confidence            999999998752                           35899999999999999999999999999999999999999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCc
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRK  219 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~  219 (327)
                      +.. .++     +++++|+|+|++|++|++++++|+++|++++++++   .+.++++|++.+++.++....+.+.+  ++
T Consensus       155 l~~-~~~-----~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~---~~~~~~~g~~~~~~~~~~~~~l~~~~--~~  223 (325)
T cd08264         155 LKT-AGL-----GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR---KDWLKEFGADEVVDYDEVEEKVKEIT--KM  223 (325)
T ss_pred             HHh-cCC-----CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH---HHHHHHhCCCeeecchHHHHHHHHHh--CC
Confidence            854 777     89999999998899999999999999999888763   36667899988887653211222223  57


Q ss_pred             ccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecc
Q 020314          220 YDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVID  299 (327)
Q Consensus       220 ~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~  299 (327)
                      +|+++|++|+..+..++++++++|+++.+|........+....+..+...+.+ .....++.++.+++++...+  ..+.
T Consensus       224 ~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~--~~~~  300 (325)
T cd08264         224 ADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIG-STGGTRKELLELVKIAKDLK--VKVW  300 (325)
T ss_pred             CCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEE-ccCCCHHHHHHHHHHHHcCC--ceeE
Confidence            99999999987789999999999999999853211122233333444445554 23345678899999996444  3455


Q ss_pred             eeeccccHHHHHHHHhcCCCCccEE
Q 020314          300 SKHSLSKAEDAWAKSISGRATGKII  324 (327)
Q Consensus       300 ~~~~~~~~~~a~~~~~~~~~~gkvv  324 (327)
                      +.|++++++++++.+.++...||++
T Consensus       301 ~~~~~~~~~~a~~~~~~~~~~~kv~  325 (325)
T cd08264         301 KTFKLEEAKEALKELFSKERDGRIL  325 (325)
T ss_pred             EEEcHHHHHHHHHHHHcCCCccccC
Confidence            7899999999999999888777753

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.8e-37  Score=271.09  Aligned_cols=312  Identities=31%  Similarity=0.433  Sum_probs=253.7

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++...+. +..+++++.+.|.+.+++|+||+.++++|++|++...|..+.  ....|..+|||++|+|+++|++++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~   77 (342)
T cd08266           1 MKAVVIRGHGG-PEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLPLPHILGSDGAGVVEAVGPGVT   77 (342)
T ss_pred             CeEEEEecCCC-ccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC--CCCCCeecccceEEEEEEeCCCCC
Confidence            68999986554 456888888888899999999999999999999998886531  124578999999999999999999


Q ss_pred             CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      ++++||+|++..                           ..|++++|+.++.+.++++|+++++++++.++.++.++|++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~  157 (342)
T cd08266          78 NVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM  157 (342)
T ss_pred             CCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence            999999999852                           25889999999999999999999999999999999999999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPS  216 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~  216 (327)
                      +.+..++     .++++++|+|+++++|++++++++..|++++.++++ ++.+.+..++.+.+++....+  ..+.....
T Consensus       158 l~~~~~~-----~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T cd08266         158 LVTRARL-----RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTG  232 (342)
T ss_pred             HHHhcCC-----CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhC
Confidence            8777777     889999999999999999999999999999888754 567777778887777655433  22333344


Q ss_pred             CCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE
Q 020314          217 GRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT  296 (327)
Q Consensus       217 ~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~  296 (327)
                      ++++|+++|++|+..+..++++++++|+++.++................++..+.+ ........+..++++++++.+.+
T Consensus       233 ~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~  311 (342)
T cd08266         233 KRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILG-STMGTKAELDEALRLVFRGKLKP  311 (342)
T ss_pred             CCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEE-EecCCHHHHHHHHHHHHcCCccc
Confidence            56799999999988788899999999999999855432111222122334444544 22345668889999999999988


Q ss_pred             ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          297 VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       297 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .+.+.|++++++++++.+.++...+|+++++
T Consensus       312 ~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         312 VIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            7778999999999999999888889999875

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=1.1e-36  Score=270.31  Aligned_cols=314  Identities=30%  Similarity=0.389  Sum_probs=247.4

Q ss_pred             eEEEEEeccCCCc--cceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            7 MHAVQYDSYGGGV--AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         7 ~~a~~~~~~g~~~--~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      |||+++.+++++.  ..+++++.+.|++.+++|+||+.++++|+.|++...+..+   ...+|.++|||++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~   77 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSE   77 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCC
Confidence            6899999988632  2477778888888999999999999999999998877653   1245678999999999999999


Q ss_pred             CCCCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314           85 VKNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      +..+++||+|++..   ..|+|++|+.++...++++|+++++++++.+++.+.++|+++.+..++.....+++++|+|+|
T Consensus        78 v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g  157 (336)
T cd08252          78 VTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIG  157 (336)
T ss_pred             CCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEc
Confidence            99999999999853   358999999999999999999999999999999999999998777777211112399999999


Q ss_pred             CCChHHHHHHHHHHhCC-CeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-Ccccccccc
Q 020314          162 ASGAVGLYAVQLAKLGN-THVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-IPWSTFEPN  238 (327)
Q Consensus       162 ~~g~~G~~~~~la~~~g-~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~  238 (327)
                      ++|++|++++++|+.+| ++++++++ +++.++++++|++.++++.......+....++++|+++|++|+ ..+..++++
T Consensus       158 ~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~  237 (336)
T cd08252         158 GAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAEL  237 (336)
T ss_pred             CCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHH
Confidence            99999999999999999 89999985 4788888999999888876422222223344689999999995 568899999


Q ss_pred             cCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-------C----CCHHHHHHHHHHHHCCceeEecc---eeecc
Q 020314          239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-------S----PKGENLDFLVKLVKEGKLKTVID---SKHSL  304 (327)
Q Consensus       239 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~g~l~~~~~---~~~~~  304 (327)
                      ++++|+++.+|....   .+....+..++..+.+...       .    ...+.++.+++++.++.+.+...   ..+++
T Consensus       238 l~~~g~~v~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  314 (336)
T cd08252         238 IAPQGHICLIVDPQE---PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA  314 (336)
T ss_pred             hcCCCEEEEecCCCC---cccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH
Confidence            999999999985421   1111122223333332111       0    11356788999999999986533   34799


Q ss_pred             ccHHHHHHHHhcCCCCccEEEe
Q 020314          305 SKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       305 ~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      ++++++++.+.+++..||++++
T Consensus       315 ~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         315 ENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHHHHHHHHHcCCccceEEeC
Confidence            9999999999999999999874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.3e-36  Score=269.20  Aligned_cols=298  Identities=27%  Similarity=0.371  Sum_probs=243.9

Q ss_pred             eEEEEEeccCCC-ccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGG-VAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~-~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      ||+|++.+.+++ ++.+++++.+.|.+.++||+||+.++++|++|++...|.++.   ..+|.++|||++|+|+++|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v   77 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGV   77 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCC
Confidence            789999887742 235888888888899999999999999999999998887642   2568899999999999999999


Q ss_pred             CCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHH
Q 020314           86 KNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAH  137 (327)
Q Consensus        86 ~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  137 (327)
                      +++++||+|++..                            .+|+|++|+.++...++++|+++++.+++.+++++.+||
T Consensus        78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~  157 (329)
T cd08298          78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGY  157 (329)
T ss_pred             CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHH
Confidence            9999999997621                            258999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCC
Q 020314          138 QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPS  216 (327)
Q Consensus       138 ~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~  216 (327)
                      +++ ..+++     +++++++|+| +|++|+++++++++.|++++++++ +++++.++++|++.+++.+..        .
T Consensus       158 ~~~-~~~~~-----~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~  222 (329)
T cd08298         158 RAL-KLAGL-----KPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL--------P  222 (329)
T ss_pred             HHH-HhhCC-----CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc--------C
Confidence            999 88888     8999999997 799999999999999999998885 467888899999887766432        2


Q ss_pred             CCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          217 GRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       217 ~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      ++++|+++++.+. ..+..++++++++|+++.+|........+.... .++...+.+ +.....+.++.++++++++.++
T Consensus       223 ~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~-~~~~~~~~~~~~~~l~~~~~l~  300 (329)
T cd08298         223 PEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRS-VANLTRQDGEEFLKLAAEIPIK  300 (329)
T ss_pred             CCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEE-ecCCCHHHHHHHHHHHHcCCCC
Confidence            3579999998764 458899999999999998874322111111111 234444444 2234567889999999999987


Q ss_pred             EecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          296 TVIDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       296 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      +. .+.|+++++++|++.+++++..||+|+
T Consensus       301 ~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         301 PE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             ce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            64 578999999999999999999999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-36  Score=269.06  Aligned_cols=309  Identities=30%  Similarity=0.408  Sum_probs=248.2

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      .|||.+.+.+. +..+++++.+.|.+.++||+|++.++++|+.|+.+..|..+..  ..+|.++|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~   77 (331)
T cd08273           1 NREVVVTRRGG-PEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVT   77 (331)
T ss_pred             CeeEEEccCCC-cccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCc
Confidence            48999998775 5679999999999999999999999999999999988875321  24678999999999999999999


Q ss_pred             CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314           87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV  166 (327)
Q Consensus        87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~  166 (327)
                      .+++||+|+++...|+|++|..++.+.++++|+++++++++.++.++.++|+++.+..++     .++++|+|+|++|++
T Consensus        78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~-----~~g~~vlI~g~~g~i  152 (331)
T cd08273          78 GFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKV-----LTGQRVLIHGASGGV  152 (331)
T ss_pred             cCCCCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCC-----CCCCEEEEECCCcHH
Confidence            999999999976569999999999999999999999999999999999999999777777     899999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEE
Q 020314          167 GLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI  246 (327)
Q Consensus       167 G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v  246 (327)
                      |++++++|+..|++|++++++++.+.++++|+.. ++....+.... ...++++|+++||+++.....++++++++|+++
T Consensus       153 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~-~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v  230 (331)
T cd08273         153 GQALLELALLAGAEVYGTASERNHAALRELGATP-IDYRTKDWLPA-MLTPGGVDVVFDGVGGESYEESYAALAPGGTLV  230 (331)
T ss_pred             HHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCeE-EcCCCcchhhh-hccCCCceEEEECCchHHHHHHHHHhcCCCEEE
Confidence            9999999999999999888755677788898654 44433331111 233357999999999888889999999999999


Q ss_pred             eecCCchhHH---HH----------hhhhccccceeeEEEEeC--------CCHHHHHHHHHHHHCCceeEecceeeccc
Q 020314          247 DFNPSPRVLL---TF----------AWKKLTFSKKQLVPFSVS--------PKGENLDFLVKLVKEGKLKTVIDSKHSLS  305 (327)
Q Consensus       247 ~~g~~~~~~~---~~----------~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~l~~~~~~~~~~~  305 (327)
                      .+|.......   .+          ..................        ...+.++.++++++++.+++.+.+.++++
T Consensus       231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  310 (331)
T cd08273         231 CYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLS  310 (331)
T ss_pred             EEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHH
Confidence            9985432211   00          000011111122221111        12367888999999999988777899999


Q ss_pred             cHHHHHHHHhcCCCCccEEE
Q 020314          306 KAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       306 ~~~~a~~~~~~~~~~gkvvv  325 (327)
                      +++++++.+.+++..||+|+
T Consensus       311 ~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         311 EVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHHHHHHcCCCcceEEe
Confidence            99999999999988899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=7.9e-37  Score=271.74  Aligned_cols=307  Identities=29%  Similarity=0.329  Sum_probs=241.7

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||+|++...+.   .+++.+.+.|.+.++|++||+.++++|+.|++++.+..........|..+|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~   77 (341)
T cd05281           1 MKAIVKTKAGP---GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVT   77 (341)
T ss_pred             CcceEEecCCC---ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCC
Confidence            68999987764   388999999999999999999999999999987654321111123567899999999999999999


Q ss_pred             CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      .+++||+|++++                           ..|+|++|++++.+.++++|++++++ +++++.++.+++++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~-~a~~~~~~~~a~~~  156 (341)
T cd05281          78 RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPE-IASIQEPLGNAVHT  156 (341)
T ss_pred             CCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHH-HhhhhhHHHHHHHH
Confidence            999999998841                           35899999999999999999999985 44666777888888


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCCCCc-ccccCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKTPDG-AALKSPS  216 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~  216 (327)
                      +.  ...     +++++|||.| +|++|++++++|+.+|+ +++++++ +++.+.++++|++.+++++..+. .+.+...
T Consensus       157 ~~--~~~-----~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  228 (341)
T cd05281         157 VL--AGD-----VSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTD  228 (341)
T ss_pred             HH--hcC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcC
Confidence            74  333     6899999987 69999999999999999 6888764 46778888999988887655432 3334456


Q ss_pred             CCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHh-hhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314          217 GRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFA-WKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL  294 (327)
Q Consensus       217 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  294 (327)
                      ++++|++|||+|+. .+..++++|+++|+++.+|..... .... ...+.+++..+.+.......+.++.+++++.++.+
T Consensus       229 ~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l  307 (341)
T cd05281         229 GTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP-VDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKV  307 (341)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC-cccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCC
Confidence            67899999999865 478889999999999998854321 1111 12355566666664433345677889999999997


Q ss_pred             e--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          295 K--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       295 ~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .  +.+...+++++++++++.+.+++ .||+|++|
T Consensus       308 ~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         308 DLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             ChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            5  45567899999999999999999 99999875

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.7e-37  Score=268.82  Aligned_cols=287  Identities=21%  Similarity=0.276  Sum_probs=232.0

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.+++    .+++++.+.|++.++||+||+.++++|+.|++...|.++      .|.++|||++|+|+++|++  
T Consensus         1 ~~a~~~~~~~----~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~------~~~~~G~e~~G~Vv~~G~~--   68 (319)
T cd08242           1 MKALVLDGGL----DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP------FPGVPGHEFVGIVEEGPEA--   68 (319)
T ss_pred             CeeEEEeCCC----cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC------CCCccCceEEEEEEEeCCC--
Confidence            6899998754    399999999999999999999999999999999888752      5678999999999999987  


Q ss_pred             CCCCCCEEEEE----------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           87 NFKVGDKVVAV----------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        87 ~~~~Gd~V~~~----------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                       +++||||...                            ..+|+|++|++++.+.++++|++++.++++.+ .+..++|.
T Consensus        69 -~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~  146 (319)
T cd08242          69 -ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE  146 (319)
T ss_pred             -CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence             6799999631                            12689999999999999999999999888864 44456665


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCC
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSG  217 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  217 (327)
                      ++ +..++     +++++|||+| +|.+|++++|+|+.+|++++++++ +++.+.++++|++.++++...       +.+
T Consensus       147 ~~-~~~~~-----~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~~  212 (319)
T cd08242         147 IL-EQVPI-----TPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE-------SEG  212 (319)
T ss_pred             HH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc-------ccC
Confidence            55 66777     8999999997 799999999999999999888874 578888888999887766432       345


Q ss_pred             CcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce--
Q 020314          218 RKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL--  294 (327)
Q Consensus       218 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l--  294 (327)
                      +++|+++||+|+. .+..++++++++|+++..+..... ..+....+.+++..+.+...    ..+++++++++++++  
T Consensus       213 ~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~l~~  287 (319)
T cd08242         213 GGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGP-ASFDLTKAVVNEITLVGSRC----GPFAPALRLLRKGLVDV  287 (319)
T ss_pred             CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-CccCHHHheecceEEEEEec----ccHHHHHHHHHcCCCCh
Confidence            6799999999874 488889999999999986643221 22233344556666655321    127889999999998  


Q ss_pred             eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          295 KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       295 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .+.+.+.|++++++++|+.+.++. .+|+|+++
T Consensus       288 ~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         288 DPLITAVYPLEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             hhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            456778999999999999999776 48999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=1.2e-36  Score=268.18  Aligned_cols=311  Identities=30%  Similarity=0.433  Sum_probs=250.4

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||++++.+.+. ++.+++++.+.|.+.+++|+||+.++++|+.|++...|.++.  +..+|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~   77 (323)
T cd05276           1 MKAIVIKEPGG-PEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP--PPGASDILGLEVAGVVVAVGPGVT   77 (323)
T ss_pred             CeEEEEecCCC-cccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC--CCCCCCcccceeEEEEEeeCCCCC
Confidence            79999988765 566888888888889999999999999999999988776531  224678999999999999999999


Q ss_pred             CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314           87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV  166 (327)
Q Consensus        87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~  166 (327)
                      .+++||+|+++..+|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.+...+     .++++|+|+|++|++
T Consensus        78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~-----~~~~~vlv~g~~~~i  152 (323)
T cd05276          78 GWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGL-----KAGETVLIHGGASGV  152 (323)
T ss_pred             CCCCCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCC-----CCCCEEEEEcCcChH
Confidence            999999999976679999999999999999999999999999999999999998777777     789999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCc
Q 020314          167 GLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG  243 (327)
Q Consensus       167 G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G  243 (327)
                      |++++++++..|+++++++++ ++.+.++.+|.+.+++....+  ..+.....++++|+++|+.|+..+..++++++++|
T Consensus       153 g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g  232 (323)
T cd05276         153 GTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDG  232 (323)
T ss_pred             HHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCC
Confidence            999999999999999888855 677777889988887766543  22333344568999999999877888899999999


Q ss_pred             EEEeecCCchhHHHHhhhhccccceeeEEEEeCC---------CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314          244 KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP---------KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS  314 (327)
Q Consensus       244 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~  314 (327)
                      +++.++.............+..++..+.+.....         ..+.++++++++.++.+.+.....|++++++++++.+
T Consensus       233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  312 (323)
T cd05276         233 RLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRM  312 (323)
T ss_pred             EEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHH
Confidence            9999875322111111111222344444432211         1234677888999999887777889999999999999


Q ss_pred             hcCCCCccEEE
Q 020314          315 ISGRATGKIIV  325 (327)
Q Consensus       315 ~~~~~~gkvvv  325 (327)
                      .++...||+++
T Consensus       313 ~~~~~~~kvv~  323 (323)
T cd05276         313 ESNEHIGKIVL  323 (323)
T ss_pred             HhCCCcceEeC
Confidence            98888888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.4e-36  Score=266.80  Aligned_cols=309  Identities=31%  Similarity=0.491  Sum_probs=251.6

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.+.+. ++.+++++.+.|.+.+++|+|++.++++|+.|++...+....  ...+|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~~~   77 (326)
T cd08272           1 MKALVLESFGG-PEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAA--RPPLPAILGCDVAGVVEAVGEGVT   77 (326)
T ss_pred             CeEEEEccCCC-chheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccccceeEEEEEeCCCCC
Confidence            69999988876 456888888888899999999999999999999988776531  123578899999999999999999


Q ss_pred             CCCCCCEEEEEc-----cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314           87 NFKVGDKVVAVL-----SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus        87 ~~~~Gd~V~~~~-----~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      ++++||+|+++.     ..|+|++|+.++...++++|+++++.+++.++..+.+||+++.+..++     +++++++|+|
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~-----~~~~~vli~g  152 (326)
T cd08272          78 RFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV-----QAGQTVLIHG  152 (326)
T ss_pred             CCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCC-----CCCCEEEEEc
Confidence            999999999864     368999999999999999999999999999999999999998888888     8999999999


Q ss_pred             CCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCCCcccccccccC
Q 020314          162 ASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWSTFEPNLG  240 (327)
Q Consensus       162 ~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~  240 (327)
                      +++++|++++++++..|+++++++++++.+.++.+|.+.+++..... ..+...+.++++|+++|++++.....++++++
T Consensus       153 ~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~  232 (326)
T cd08272         153 GAGGVGHVAVQLAKAAGARVYATASSEKAAFARSLGADPIIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVA  232 (326)
T ss_pred             CCCcHHHHHHHHHHHcCCEEEEEechHHHHHHHHcCCCEEEecchhHHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhc
Confidence            99999999999999999999988855777788889998887765432 12334455678999999999877888999999


Q ss_pred             CCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC----------CCHHHHHHHHHHHHCCceeEecc-eeeccccHHH
Q 020314          241 TTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS----------PKGENLDFLVKLVKEGKLKTVID-SKHSLSKAED  309 (327)
Q Consensus       241 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~l~~~~~-~~~~~~~~~~  309 (327)
                      ++|+++.++.....  ..  .....++..+.+....          ...+.+..+++++.++.+++.+. +.|+++++++
T Consensus       233 ~~g~~v~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~  308 (326)
T cd08272         233 LYGRVVSILGGATH--DL--APLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAA  308 (326)
T ss_pred             cCCEEEEEecCCcc--ch--hhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHH
Confidence            99999998755311  11  1111233333332211          12456788999999999987655 8999999999


Q ss_pred             HHHHHhcCCCCccEEEeC
Q 020314          310 AWAKSISGRATGKIIVEP  327 (327)
Q Consensus       310 a~~~~~~~~~~gkvvv~~  327 (327)
                      +++.+.+++..||+++++
T Consensus       309 ~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         309 AHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHHHHcCCcccEEEEEC
Confidence            999999888889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=9.5e-37  Score=271.45  Aligned_cols=301  Identities=24%  Similarity=0.333  Sum_probs=239.4

Q ss_pred             EEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcC-CCCCCCCCCCeeecccceEEEEecCCCCCCC
Q 020314           10 VQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGM-LRPFLPRKFPFIPASDVAGEVIGLGSEVKNF   88 (327)
Q Consensus        10 ~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~-~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   88 (327)
                      .++.++.    .+++++.+.|.+.++||+||+.++++|+.|++...+. ..... ..+|.++|+|++|+|+++|++++++
T Consensus         2 ~~~~~~~----~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~   76 (343)
T cd05285           2 AVLHGPG----DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFV-VKEPMVLGHESAGTVVAVGSGVTHL   76 (343)
T ss_pred             ceEecCC----ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccC-CCCCcccCcceeEEEEeeCCCCCCC
Confidence            4566553    3899999999999999999999999999999876432 21111 1356789999999999999999999


Q ss_pred             CCCCEEEEE------------------------c----cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHH
Q 020314           89 KVGDKVVAV------------------------L----SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQAL  140 (327)
Q Consensus        89 ~~Gd~V~~~------------------------~----~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al  140 (327)
                      ++||+|++.                        .    ..|+|++|++++++.++++|+++++++++.+ .++.+|++++
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~  155 (343)
T cd05285          77 KVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC  155 (343)
T ss_pred             CCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH
Confidence            999999861                        1    2589999999999999999999999999876 5778999997


Q ss_pred             HHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCCc-----cccc
Q 020314          141 TQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKTPDG-----AALK  213 (327)
Q Consensus       141 ~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~-----~~~~  213 (327)
                       ...++     +++++|||.| +|++|++++++|+++|++ |+++++ +++.++++++|++.+++++..+.     .+..
T Consensus       156 -~~~~~-----~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~  228 (343)
T cd05285         156 -RRAGV-----RPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAE  228 (343)
T ss_pred             -HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHH
Confidence             77777     8999999987 699999999999999997 777765 46778888899999988765442     2344


Q ss_pred             CCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC
Q 020314          214 SPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG  292 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  292 (327)
                      .+.++++|++|||+|+. .+..++++++++|+++.+|..... ..+......++...+.+...  ..+.++.++++++++
T Consensus       229 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~  305 (343)
T cd05285         229 LLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVFR--YANTYPTAIELLASG  305 (343)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEecc--ChHHHHHHHHHHHcC
Confidence            56667899999999976 588899999999999999854322 22222345556666665332  236788899999999


Q ss_pred             cee--EecceeeccccHHHHHHHHhcCC-CCccEEEe
Q 020314          293 KLK--TVIDSKHSLSKAEDAWAKSISGR-ATGKIIVE  326 (327)
Q Consensus       293 ~l~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~  326 (327)
                      .+.  +.+.+.|+++++.++++.+.++. ..+|++++
T Consensus       306 ~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  342 (343)
T cd05285         306 KVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIE  342 (343)
T ss_pred             CCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence            865  34567899999999999999885 45899874

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.1e-36  Score=271.09  Aligned_cols=303  Identities=23%  Similarity=0.311  Sum_probs=242.9

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||||++++++.    +.+++.+.|++.++||+||+.++++|+.|++...+.++    ...|.++|+|++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~----l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~----~~~~~~~g~~~~G~V~~~g~~v~   72 (343)
T cd08236           1 MKALVLTGPGD----LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA----YHPPLVLGHEFSGTVEEVGSGVD   72 (343)
T ss_pred             CeeEEEecCCc----eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC----CCCCcccCcceEEEEEEECCCCC
Confidence            79999988754    88999999999999999999999999999998887652    24568899999999999999999


Q ss_pred             CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      .+++||+|+++.                           ..|+|++|..++++.++++|+++++++++.+ .++.+||++
T Consensus        73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~  151 (343)
T cd08236          73 DLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA  151 (343)
T ss_pred             cCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence            999999999852                           3689999999999999999999999999887 677899999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHHHHHhcCCCEEEeCCCCC-cccccCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIELVKSLGADEVLDYKTPD-GAALKSPS  216 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~  216 (327)
                      +. ..++     +++++|+|+| +|.+|.+++++|+.+|++ +++++++ ++.++++++|.+.++++++.. ..+.....
T Consensus       152 l~-~~~~-----~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~  224 (343)
T cd08236         152 VR-LAGI-----TLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTE  224 (343)
T ss_pred             HH-hcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhC
Confidence            94 6676     8899999997 699999999999999997 8888754 667777889998888876543 22334455


Q ss_pred             CCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhH--HHHhhhhccccceeeEEEEeC----CCHHHHHHHHHHH
Q 020314          217 GRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVL--LTFAWKKLTFSKKQLVPFSVS----PKGENLDFLVKLV  289 (327)
Q Consensus       217 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  289 (327)
                      ++++|+++||+|+. .+..++++|+++|+++.+|......  .......+..++..+.+....    ...+.++.+++++
T Consensus       225 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (343)
T cd08236         225 GRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLL  304 (343)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHH
Confidence            66799999999864 4788999999999999998543210  111112223444555443221    1256788899999


Q ss_pred             HCCcee--EecceeeccccHHHHHHHHhc-CCCCccEEE
Q 020314          290 KEGKLK--TVIDSKHSLSKAEDAWAKSIS-GRATGKIIV  325 (327)
Q Consensus       290 ~~g~l~--~~~~~~~~~~~~~~a~~~~~~-~~~~gkvvv  325 (327)
                      +++.+.  +.+...+++++++++++.+.+ +...||+|+
T Consensus       305 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         305 ASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             HcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            999875  445678999999999999998 556788874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.2e-36  Score=271.15  Aligned_cols=303  Identities=24%  Similarity=0.301  Sum_probs=240.0

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      ||+|++.++++    +++++.+.|.| .++||+||+.++++|++|++...|.++    ...|.++|||++|+|+++|+++
T Consensus         1 m~~~~~~~~~~----~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v   72 (345)
T cd08287           1 MRATVIHGPGD----IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEV   72 (345)
T ss_pred             CceeEEecCCc----eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCC
Confidence            78999986554    89999999985 899999999999999999998888753    2457899999999999999999


Q ss_pred             CCCCCCCEEEEEc---------------------------cCcccceeEeecCC--ceeeCCCCCChhhhc-----ccCc
Q 020314           86 KNFKVGDKVVAVL---------------------------SGGGLAEFAVAKES--LTVARPQEVSAAEGA-----GIPC  131 (327)
Q Consensus        86 ~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa-----~~~~  131 (327)
                      ..+++||+|++..                           .+|+|++|..++.+  .++++|++++++.+.     ++..
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~  152 (345)
T cd08287          73 TSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD  152 (345)
T ss_pred             CccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence            9999999998721                           13889999999975  999999999873221     2235


Q ss_pred             hHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHHHHHhcCCCEEEeCCCCC-
Q 020314          132 AGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIELVKSLGADEVLDYKTPD-  208 (327)
Q Consensus       132 ~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~~~~~lg~~~v~~~~~~~-  208 (327)
                      .+.+||+++ ...++     +++++|+|.| +|++|++++++|++.|++ ++++++. ++.+.++++|++.++++...+ 
T Consensus       153 ~~~~a~~~~-~~~~~-----~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~  225 (345)
T cd08287         153 VMGTGHHAA-VSAGV-----RPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEA  225 (345)
T ss_pred             HHHHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccH
Confidence            678999998 46677     8899999976 899999999999999995 6666654 577888999999999887654 


Q ss_pred             -cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHH
Q 020314          209 -GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLV  286 (327)
Q Consensus       209 -~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (327)
                       ..+.+.+.+.++|+++|++|+. .+..++++++++|+++.+|..... ..+.......++..+.+ ......+.+++++
T Consensus       226 ~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  303 (345)
T cd08287         226 VARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG-VELDVRELFFRNVGLAG-GPAPVRRYLPELL  303 (345)
T ss_pred             HHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCC-CccCHHHHHhcceEEEE-ecCCcHHHHHHHH
Confidence             2344455667899999999864 488999999999999998855421 12222122345555554 3334567899999


Q ss_pred             HHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          287 KLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       287 ~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++.++.+++  .+.+.+++++++++++.+.++... |+++++
T Consensus       304 ~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~~  345 (345)
T cd08287         304 DDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLRP  345 (345)
T ss_pred             HHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeCC
Confidence            9999999875  356789999999999999877665 998864

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=1.2e-36  Score=269.41  Aligned_cols=309  Identities=26%  Similarity=0.274  Sum_probs=242.9

Q ss_pred             ceEEEEEeccCC---CccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            6 VMHAVQYDSYGG---GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         6 ~~~a~~~~~~g~---~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      +.|+|++.++++   +++.+++++.+.|++.+++|+||+.++++|+.|.....+......+...+.++|+|++|+|+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G   80 (329)
T cd05288           1 SNRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESR   80 (329)
T ss_pred             CCcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecC
Confidence            468999998875   57889999999999999999999999999998876665542111122235678999999999999


Q ss_pred             CCCCCCCCCCEEEEEccCcccceeEeecC-CceeeCCCCCC--hhhhcc-cCchHHHHHHHHHHhhCCccCCCCCCCeEE
Q 020314           83 SEVKNFKVGDKVVAVLSGGGLAEFAVAKE-SLTVARPQEVS--AAEGAG-IPCAGLTAHQALTQSLGVKLDGSGQQKNIL  158 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~-~~~~~ip~~~~--~~~aa~-~~~~~~ta~~al~~~~~~~~~~~~~~~~vl  158 (327)
                      ++  ++++||||+++   ++|++|+.++. +.++++|++++  +.+++. +++++.++|+++.+..++     .++++||
T Consensus        81 ~~--~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~-----~~~~~vl  150 (329)
T cd05288          81 SP--DFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKP-----KPGETVV  150 (329)
T ss_pred             CC--CCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCC-----CCCCEEE
Confidence            64  79999999985   58999999999 99999999985  445555 888999999999777777     7899999


Q ss_pred             EEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHh-cCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCcccc
Q 020314          159 ITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKS-LGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWST  234 (327)
Q Consensus       159 V~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~-lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~  234 (327)
                      |+|++|++|++++++|+..|++++++++. ++.+.+++ +|++.++++.+.+.  .+.... ++++|++|||+|+..+..
T Consensus       151 I~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~-~~~~d~vi~~~g~~~~~~  229 (329)
T cd05288         151 VSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAA-PDGIDVYFDNVGGEILDA  229 (329)
T ss_pred             EecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhc-cCCceEEEEcchHHHHHH
Confidence            99999999999999999999999988854 67778877 99998888766442  233333 367999999999877889


Q ss_pred             cccccCCCcEEEeecCCchhHHH-----HhhhhccccceeeEEEEeCCC----HHHHHHHHHHHHCCceeEecceeeccc
Q 020314          235 FEPNLGTTGKVIDFNPSPRVLLT-----FAWKKLTFSKKQLVPFSVSPK----GENLDFLVKLVKEGKLKTVIDSKHSLS  305 (327)
Q Consensus       235 ~~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~  305 (327)
                      ++++++++|+++.+|........     ........++..+.+......    .+.+.++++++.++.+++.....++++
T Consensus       230 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~  309 (329)
T cd05288         230 ALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLE  309 (329)
T ss_pred             HHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHH
Confidence            99999999999999854321110     112222344555554332222    356788899999999987656679999


Q ss_pred             cHHHHHHHHhcCCCCccEEE
Q 020314          306 KAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       306 ~~~~a~~~~~~~~~~gkvvv  325 (327)
                      +++++++.+.+++..||+++
T Consensus       310 ~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         310 NAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HHHHHHHHHhcCCCccceeC
Confidence            99999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=3e-36  Score=266.31  Aligned_cols=310  Identities=22%  Similarity=0.281  Sum_probs=243.4

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.++|+ ++.+++++.+.|++.++||+||+.++++|+.|.+...|.++.  ...+|..+|||++|+|++  ++++
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~   75 (324)
T cd08288           1 FKALVLEKDDG-GTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI--VRTFPLVPGIDLAGTVVE--SSSP   75 (324)
T ss_pred             CeeEEEeccCC-CcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc--cCCCCCccccceEEEEEe--CCCC
Confidence            79999998886 467999999999999999999999999999999988876531  113577899999999998  7778


Q ss_pred             CCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHh--hCCccCCCCCCCeEE
Q 020314           87 NFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQS--LGVKLDGSGQQKNIL  158 (327)
Q Consensus        87 ~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~--~~~~~~~~~~~~~vl  158 (327)
                      ++++||+|+++.      ..|+|++|.+++.+.++++|+++++++++.++.+++++++++...  .+..    +++++|+
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~----~~~~~vl  151 (324)
T cd08288          76 RFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVT----PGDGPVL  151 (324)
T ss_pred             CCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcC----CCCCEEE
Confidence            899999999853      368999999999999999999999999999999999998876422  2331    3678999


Q ss_pred             EEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccccccc
Q 020314          159 ITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEP  237 (327)
Q Consensus       159 V~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~  237 (327)
                      |+|++|++|++++++|+++|+++++++ ++++.+.++++|++.++++++....... ....++|.++|+++++.+...+.
T Consensus       152 I~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~  230 (324)
T cd08288         152 VTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRP-LQKERWAGAVDTVGGHTLANVLA  230 (324)
T ss_pred             EECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhh-hccCcccEEEECCcHHHHHHHHH
Confidence            999999999999999999999999887 4578888899999999887654332222 22335899999999866777888


Q ss_pred             ccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-----CCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHH
Q 020314          238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-----SPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWA  312 (327)
Q Consensus       238 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~  312 (327)
                      .++.+|+++.+|.............+..++..+.+...     ....+.++.+.+++..+.+.+ +.+.+++++++++++
T Consensus       231 ~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~  309 (324)
T cd08288         231 QTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-LTREIPLADVPDAAE  309 (324)
T ss_pred             HhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-cceeecHHHHHHHHH
Confidence            88999999998854211111111222234444444321     112456777888888888875 467999999999999


Q ss_pred             HHhcCCCCccEEEeC
Q 020314          313 KSISGRATGKIIVEP  327 (327)
Q Consensus       313 ~~~~~~~~gkvvv~~  327 (327)
                      .+.+++..||+++++
T Consensus       310 ~~~~~~~~~~vvv~~  324 (324)
T cd08288         310 AILAGQVRGRVVVDV  324 (324)
T ss_pred             HHhcCCccCeEEEeC
Confidence            999999999999874

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.9e-36  Score=263.68  Aligned_cols=308  Identities=45%  Similarity=0.676  Sum_probs=243.4

Q ss_pred             EEeccCCCccce--EEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCC
Q 020314           11 QYDSYGGGVAGL--KHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNF   88 (327)
Q Consensus        11 ~~~~~g~~~~~l--~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   88 (327)
                      +++.+++ ++++  ++++.+.|++.++||+|++.++++|+.|.+...|.++...+...|..+|||++|+|+++|+++.++
T Consensus         2 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~   80 (319)
T cd08267           2 VYTRYGS-PEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRF   80 (319)
T ss_pred             eeCCCCC-hhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCC
Confidence            3455665 3444  788889999999999999999999999999988765321122456789999999999999999999


Q ss_pred             CCCCEEEEEcc---CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCCh
Q 020314           89 KVGDKVVAVLS---GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA  165 (327)
Q Consensus        89 ~~Gd~V~~~~~---~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~  165 (327)
                      ++||+|++...   .|+|++|..++.+.++++|+++++++++.+++++.+||+++.+..++     +++++|+|+|++|+
T Consensus        81 ~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~g~~vli~g~~g~  155 (319)
T cd08267          81 KVGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKV-----KPGQRVLINGASGG  155 (319)
T ss_pred             CCCCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCC-----CCCCEEEEEcCCcH
Confidence            99999998753   58999999999999999999999999999999999999999777767     89999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc--ccccccccCCCc
Q 020314          166 VGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP--WSTFEPNLGTTG  243 (327)
Q Consensus       166 ~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--~~~~~~~l~~~G  243 (327)
                      +|++++++|+..|+++++++++++.+.++.+|.+.+++....+.. .....++++|+++||+++..  .......++++|
T Consensus       156 ~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g  234 (319)
T cd08267         156 VGTFAVQIAKALGAHVTGVCSTRNAELVRSLGADEVIDYTTEDFV-ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGG  234 (319)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCCEeecCCCCCcc-hhccCCCCCcEEEECCCchHHHHHHhhhccCCCC
Confidence            999999999999999998886677788889999888876554432 34455678999999998532  333444599999


Q ss_pred             EEEeecCCchhHHHHh---hhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCC
Q 020314          244 KVIDFNPSPRVLLTFA---WKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRAT  320 (327)
Q Consensus       244 ~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~  320 (327)
                      +++.+|..........   ..........+.........+.+.+++++++++.+++.+.+.|++++++++++.+.+++..
T Consensus       235 ~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~  314 (319)
T cd08267         235 RYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRAR  314 (319)
T ss_pred             EEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCC
Confidence            9999985532211110   0111122222222222334788999999999999988888899999999999999998888


Q ss_pred             ccEEE
Q 020314          321 GKIIV  325 (327)
Q Consensus       321 gkvvv  325 (327)
                      +|+++
T Consensus       315 ~~vvv  319 (319)
T cd08267         315 GKVVI  319 (319)
T ss_pred             CcEeC
Confidence            88874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=8.5e-36  Score=261.29  Aligned_cols=306  Identities=37%  Similarity=0.574  Sum_probs=249.4

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||++++...+. .+.+.+++.+.|.+.++||+||+.++++|+.|++...|..........|..+|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~   79 (309)
T cd05289           1 MKAVRIHEYGG-PEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT   79 (309)
T ss_pred             CceEEEcccCC-ccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence            78999987765 45567777777789999999999999999999998877652111234578999999999999999999


Q ss_pred             CCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCC
Q 020314           87 NFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS  163 (327)
Q Consensus        87 ~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~  163 (327)
                      ++++||+|+++.   ..|++++|+.++...++++|+++++..++.+++.+.++|+++.+...+     .++++++|+|++
T Consensus        80 ~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vlv~g~~  154 (309)
T cd05289          80 GFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGL-----KAGQTVLIHGAA  154 (309)
T ss_pred             CCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCC-----CCCCEEEEecCC
Confidence            999999999864   268999999999999999999999999999999999999999777667     789999999988


Q ss_pred             ChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCc
Q 020314          164 GAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG  243 (327)
Q Consensus       164 g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G  243 (327)
                      |.+|++++++++..|+++++++++++.+.++.+|.+.+++....+...  ...++++|+++|++++.....++++++++|
T Consensus       155 g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g  232 (309)
T cd05289         155 GGVGSFAVQLAKARGARVIATASAANADFLRSLGADEVIDYTKGDFER--AAAPGGVDAVLDTVGGETLARSLALVKPGG  232 (309)
T ss_pred             chHHHHHHHHHHHcCCEEEEEecchhHHHHHHcCCCEEEeCCCCchhh--ccCCCCceEEEECCchHHHHHHHHHHhcCc
Confidence            999999999999999999988855577777889988887765543221  345567999999999888889999999999


Q ss_pred             EEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccE
Q 020314          244 KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKI  323 (327)
Q Consensus       244 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkv  323 (327)
                      +++.+|.......     ....+......+...+..+.++.++++++++.+.+.+.+.|++++++++++.+.+++..+|+
T Consensus       233 ~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kv  307 (309)
T cd05289         233 RLVSIAGPPPAEQ-----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKV  307 (309)
T ss_pred             EEEEEcCCCcchh-----hhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhCCCCCcE
Confidence            9999986543211     11122222322222222678899999999999988888899999999999999998888888


Q ss_pred             EE
Q 020314          324 IV  325 (327)
Q Consensus       324 vv  325 (327)
                      ++
T Consensus       308 v~  309 (309)
T cd05289         308 VL  309 (309)
T ss_pred             eC
Confidence            74

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=2.8e-36  Score=267.60  Aligned_cols=300  Identities=27%  Similarity=0.379  Sum_probs=241.6

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.++++    +++++.+.|++.++||+||++++++|+.|++...|.++    ..+|.++|+|++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~----~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~   72 (334)
T cd08234           1 MKALVYEGPGE----LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVT   72 (334)
T ss_pred             CeeEEecCCCc----eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCC
Confidence            78999987664    89999999999999999999999999999999988764    24778999999999999999999


Q ss_pred             CCCCCCEEEEE------------------------c---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAV------------------------L---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~------------------------~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      ++++||+|++.                        .   ..|+|++|+.++.+.++++|+++++.+++.+ ..+.+++++
T Consensus        73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  151 (334)
T cd08234          73 GFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHG  151 (334)
T ss_pred             CCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHH
Confidence            99999999871                        1   3689999999999999999999999998766 777899999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSG  217 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~  217 (327)
                      + ...++     +++++|+|+| +|.+|.+++++|+..|++ ++++++ +++.+.++++|.+.++++...+....+.+.+
T Consensus       152 l-~~~~~-----~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  224 (334)
T cd08234         152 L-DLLGI-----KPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNP  224 (334)
T ss_pred             H-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcC
Confidence            8 77777     8999999997 699999999999999997 777764 4677778889988888776554211134456


Q ss_pred             CcccEEEeCCCCC-cccccccccCCCcEEEeecCCch-hHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          218 RKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPR-VLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       218 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      +++|++|||++.. .+..++++++++|+++.+|.... ....+....+..++..+.+.  ......++.++++++++++.
T Consensus       225 ~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~  302 (334)
T cd08234         225 YGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGS--FINPYTFPRAIALLESGKID  302 (334)
T ss_pred             CCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEe--ccCHHHHHHHHHHHHcCCCC
Confidence            7899999999854 47888999999999999985432 11111111222234444442  23456788999999999986


Q ss_pred             E--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          296 T--VIDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       296 ~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      +  .+...+++++++++++.+.+ ...||+|+
T Consensus       303 ~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         303 VKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             hhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            4  35678999999999999998 77889886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-36  Score=272.68  Aligned_cols=295  Identities=22%  Similarity=0.297  Sum_probs=233.5

Q ss_pred             eEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCC---C-CCCCCCeeecccceEEEEecCCCCCCCCCCCEEEE-
Q 020314           22 LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP---F-LPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVA-   96 (327)
Q Consensus        22 l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~---~-~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~-   96 (327)
                      +++++.+.|++.++||+||+.++|+|++|++...+....   + ....+|.++|||++|+|+++|++++++++||+|++ 
T Consensus        39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~  118 (384)
T cd08265          39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE  118 (384)
T ss_pred             EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence            999999999999999999999999999999987642110   0 01256789999999999999999999999999985 


Q ss_pred             --------------------------EccCcccceeEeecCCceeeCCCCC-------ChhhhcccCchHHHHHHHHHHh
Q 020314           97 --------------------------VLSGGGLAEFAVAKESLTVARPQEV-------SAAEGAGIPCAGLTAHQALTQS  143 (327)
Q Consensus        97 --------------------------~~~~g~~a~~~~~~~~~~~~ip~~~-------~~~~aa~~~~~~~ta~~al~~~  143 (327)
                                                +..+|+|++|+.++.+.++++|+.+       +.+ +++++.++++||+++...
T Consensus       119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~  197 (384)
T cd08265         119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR  197 (384)
T ss_pred             CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence                                      2236899999999999999999863       344 666777889999998655


Q ss_pred             -hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCCC---C--cccccCC
Q 020314          144 -LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKTP---D--GAALKSP  215 (327)
Q Consensus       144 -~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~~---~--~~~~~~~  215 (327)
                       .++     ++|++|+|+| +|++|++++++|+..|+ +++++++ +++.++++++|++.++++.+.   +  ..+.+.+
T Consensus       198 ~~~~-----~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~  271 (384)
T cd08265         198 GGGF-----RPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVT  271 (384)
T ss_pred             cCCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhc
Confidence             567     8999999996 79999999999999999 7888875 467888899999998887643   2  2345556


Q ss_pred             CCCcccEEEeCCCCC--cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCc
Q 020314          216 SGRKYDAVINCVTGI--PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       216 ~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  293 (327)
                      .++++|+++|++|++  .+..++++++++|+++.+|..... ..+......++...+.+.........+++++++++++.
T Consensus       272 ~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~  350 (384)
T cd08265         272 KGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATT-VPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGK  350 (384)
T ss_pred             CCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCC-CcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCC
Confidence            677899999999964  477889999999999999854321 12222334445555665433334557899999999999


Q ss_pred             eeE--ecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          294 LKT--VIDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       294 l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      +++  ++.+.|++++++++++.+.++ ..||+|+
T Consensus       351 l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         351 IDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             CChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            875  356789999999999997665 5788876

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=6.2e-36  Score=263.26  Aligned_cols=310  Identities=30%  Similarity=0.402  Sum_probs=248.2

Q ss_pred             EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314            8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN   87 (327)
Q Consensus         8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   87 (327)
                      |||.+...+. ++.+.+.+.+.+.+.++||+|++.++++|+.|++...+..+    ..+|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~   75 (320)
T cd05286           1 KAVRIHKTGG-PEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTG   75 (320)
T ss_pred             CeEEEecCCC-ccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCC
Confidence            4677765554 45677777777778999999999999999999999887653    245778999999999999999999


Q ss_pred             CCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHH
Q 020314           88 FKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG  167 (327)
Q Consensus        88 ~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G  167 (327)
                      +++||+|+++...|++++|+.++.+.++++|++++..+++.++..+.++|+++.+..++     .++++|+|+|++|++|
T Consensus        76 ~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~-----~~g~~vlI~g~~g~~g  150 (320)
T cd05286          76 FKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPV-----KPGDTVLVHAAAGGVG  150 (320)
T ss_pred             CCCCCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCC-----CCCCEEEEEcCCchHH
Confidence            99999999853378999999999999999999999999999999999999999877877     8899999999999999


Q ss_pred             HHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcE
Q 020314          168 LYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK  244 (327)
Q Consensus       168 ~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~  244 (327)
                      ++++++++.+|+++++++++ ++.+.++++|++.+++....+  ..+...+.++++|+++||+++.....++++++++|+
T Consensus       151 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~  230 (320)
T cd05286         151 LLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGT  230 (320)
T ss_pred             HHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcE
Confidence            99999999999999998854 677888889998888766543  234444566789999999998778899999999999


Q ss_pred             EEeecCCchhHHHHhhhhccccceeeEEEE---eCCC----HHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcC
Q 020314          245 VIDFNPSPRVLLTFAWKKLTFSKKQLVPFS---VSPK----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISG  317 (327)
Q Consensus       245 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~  317 (327)
                      ++.+|........+....+..+...+....   ....    .+.++.+++++.++.+.+...+.|++++++++++.+.++
T Consensus       231 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~  310 (320)
T cd05286         231 LVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESR  310 (320)
T ss_pred             EEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcC
Confidence            999985432111111111112222222211   1112    244567888999999887777889999999999999999


Q ss_pred             CCCccEEEeC
Q 020314          318 RATGKIIVEP  327 (327)
Q Consensus       318 ~~~gkvvv~~  327 (327)
                      ...||+++.|
T Consensus       311 ~~~~~vv~~~  320 (320)
T cd05286         311 KTTGKLLLIP  320 (320)
T ss_pred             CCCceEEEeC
Confidence            8889999875

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=9.1e-36  Score=262.85  Aligned_cols=312  Identities=29%  Similarity=0.465  Sum_probs=251.9

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||+++++++++ ++.+++.+.+.|.+.+++|+|++.++++|+.|++...|..+.  ....|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~   77 (325)
T cd08253           1 MRAIRYHEFGA-PDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVD   77 (325)
T ss_pred             CceEEEcccCC-cccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCC
Confidence            68999987764 566888899999999999999999999999999988776532  125688999999999999999999


Q ss_pred             CCCCCCEEEEEc-----cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314           87 NFKVGDKVVAVL-----SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus        87 ~~~~Gd~V~~~~-----~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      ++++||+|++..     ..|++++|+.++.+.++++|+++++.+++.+++++.+||+++....++     .++++++|+|
T Consensus        78 ~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~-----~~g~~vlI~g  152 (325)
T cd08253          78 GLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGA-----KAGETVLVHG  152 (325)
T ss_pred             CCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCC-----CCCCEEEEEc
Confidence            999999999865     368999999999999999999999999999999999999999877888     8899999999


Q ss_pred             CCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccc
Q 020314          162 ASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPN  238 (327)
Q Consensus       162 ~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  238 (327)
                      +++++|++++++++..|++++++++. ++.+.+.++|.+.+++....+  ......+.++++|+++||+++......+++
T Consensus       153 ~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  232 (325)
T cd08253         153 GSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDV  232 (325)
T ss_pred             CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHh
Confidence            99999999999999999999998864 677777889998888776544  223334455689999999998777888899


Q ss_pred             cCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-CCC----HHHHHHHHHHHHCCceeEecceeeccccHHHHHHH
Q 020314          239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-SPK----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAK  313 (327)
Q Consensus       239 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~  313 (327)
                      ++++|+++.++.... ........+..+...+.+... ...    .+.++.+.+++.++.+++.....+++++++++++.
T Consensus       233 l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  311 (325)
T cd08253         233 LAPGGRIVVYGSGGL-RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEA  311 (325)
T ss_pred             hCCCCEEEEEeecCC-cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHH
Confidence            999999999885431 111111122223333333221 112    23456677788888888777788999999999999


Q ss_pred             HhcCCCCccEEEeC
Q 020314          314 SISGRATGKIIVEP  327 (327)
Q Consensus       314 ~~~~~~~gkvvv~~  327 (327)
                      +.++...||+++++
T Consensus       312 ~~~~~~~~kvv~~~  325 (325)
T cd08253         312 VESGGAIGKVVLDP  325 (325)
T ss_pred             HHcCCCcceEEEeC
Confidence            99998899999874

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=5.4e-36  Score=266.28  Aligned_cols=301  Identities=26%  Similarity=0.313  Sum_probs=235.0

Q ss_pred             eccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCC
Q 020314           13 DSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGD   92 (327)
Q Consensus        13 ~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   92 (327)
                      ++++.+   +++++.+.|.+.++||+||+.++++|+.|+.++.+..........|.++|+|++|+|+++|++++++++||
T Consensus         5 ~~~~~~---~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   81 (340)
T TIGR00692         5 TKPGYG---AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGD   81 (340)
T ss_pred             ccCCCC---cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCC
Confidence            344544   88999999999999999999999999999998765421111123567899999999999999999999999


Q ss_pred             EEEEE---------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhC
Q 020314           93 KVVAV---------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLG  145 (327)
Q Consensus        93 ~V~~~---------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~  145 (327)
                      +|++.                           ...|+|++|.+++++.++++|++++.+.+ +++.++.++++++  ...
T Consensus        82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~  158 (340)
T TIGR00692        82 YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAG  158 (340)
T ss_pred             EEEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--Hcc
Confidence            99872                           24689999999999999999999998654 5677888998876  334


Q ss_pred             CccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCccc
Q 020314          146 VKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYD  221 (327)
Q Consensus       146 ~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d  221 (327)
                      +     +++++++|.| +|++|.+++++|+.+|++ |+++.++ ++.+.++++|++.++++...+  ..+.+...++++|
T Consensus       159 ~-----~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d  232 (340)
T TIGR00692       159 P-----ISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVD  232 (340)
T ss_pred             C-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCC
Confidence            4     7899999976 799999999999999996 7777543 577788899998888776544  2233445567899


Q ss_pred             EEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHH-hhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee--Ee
Q 020314          222 AVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTF-AWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK--TV  297 (327)
Q Consensus       222 ~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~  297 (327)
                      +++||+|+. .+...+++++++|+++.+|..... ... ....+.++...+.+.......+.+.+++++++++.++  +.
T Consensus       233 ~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~  311 (340)
T TIGR00692       233 VFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-VTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPI  311 (340)
T ss_pred             EEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-cccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHh
Confidence            999998864 478889999999999999864321 111 1224556666666544333445678899999999986  45


Q ss_pred             cceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          298 IDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       298 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +.+.+++++++++++.+.+++. ||+|+++
T Consensus       312 ~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       312 ITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             eeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            6788999999999999998874 9999874

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.9e-36  Score=261.55  Aligned_cols=295  Identities=22%  Similarity=0.263  Sum_probs=236.2

Q ss_pred             cceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHH-hcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEc
Q 020314           20 AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQ-KGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL   98 (327)
Q Consensus        20 ~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~   98 (327)
                      +.+++++.+.|++.++||+||+.++++|+.|++.. .|..... ...+|.++|+|++|+|+++|++++++++||+|+++ 
T Consensus         5 ~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-   82 (312)
T cd08269           5 GRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL-   82 (312)
T ss_pred             CeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe-
Confidence            45999999999999999999999999999999987 6654211 11347899999999999999999999999999985 


Q ss_pred             cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC
Q 020314           99 SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN  178 (327)
Q Consensus        99 ~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g  178 (327)
                      ..|+|++|+.++.+.++++|+++  ..++....++.++++++. ..++     +++++|+|+| +|++|.+++++|+.+|
T Consensus        83 ~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~-----~~~~~vlI~g-~g~vg~~~~~la~~~g  153 (312)
T cd08269          83 SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWI-----RAGKTVAVIG-AGFIGLLFLQLAAAAG  153 (312)
T ss_pred             cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence            36899999999999999999988  233332377889999985 7777     8999999997 7999999999999999


Q ss_pred             Ce-EEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCch
Q 020314          179 TH-VTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       179 ~~-v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  253 (327)
                      ++ ++++++. ++.++++++|++.+++....+  ..+.+.+.+.++|+++||+|+. .+..++++++++|+++.+|....
T Consensus       154 ~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~  233 (312)
T cd08269         154 ARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQD  233 (312)
T ss_pred             CcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC
Confidence            98 8888754 577788899998888765443  2344455667899999999865 47889999999999999985532


Q ss_pred             hHHHHhhhhccccceeeEEEEeC---CCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCC-CccEEE
Q 020314          254 VLLTFAWKKLTFSKKQLVPFSVS---PKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRA-TGKIIV  325 (327)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv  325 (327)
                      ....+....+.+++..+.++...   ...+.++.++++++++.+.+  ++.+.|++++++++++.+.+++. .+|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         234 GPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             CCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            22233334566777776654322   12468899999999999886  35678999999999999999875 578876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=2.1e-35  Score=261.51  Aligned_cols=300  Identities=26%  Similarity=0.385  Sum_probs=242.3

Q ss_pred             EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314            8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN   87 (327)
Q Consensus         8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   87 (327)
                      |++++.+.|.   .+++++.+.|.+.+++|+|++.++++|+.|++...|.++   ...+|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~---~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~~g~~~~~   74 (330)
T cd08245           1 KAAVVHAAGG---PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG---GSKYPLVPGHEIVGEVVEVGAGVEG   74 (330)
T ss_pred             CeEEEecCCC---CceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC---CCCCCcccCccceEEEEEECCCCcc
Confidence            6888987753   399999999999999999999999999999999888753   2256789999999999999999999


Q ss_pred             CCCCCEEEEE----------------------------ccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           88 FKVGDKVVAV----------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        88 ~~~Gd~V~~~----------------------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      +++||+|+..                            ...|+|++|+.++...++++|+++++.+++.+++.+.+||++
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~  154 (330)
T cd08245          75 RKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA  154 (330)
T ss_pred             cccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence            9999999842                            136899999999999999999999999999999999999999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGR  218 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~  218 (327)
                      +.. .++     +++++|||+| +|++|++++++|+..|.+|++++++ ++.+.++++|++.+++....+....  . .+
T Consensus       155 l~~-~~~-----~~~~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~-~~  224 (330)
T cd08245         155 LRD-AGP-----RPGERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQA--A-AG  224 (330)
T ss_pred             HHh-hCC-----CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHh--c-cC
Confidence            854 667     8899999997 6889999999999999999988854 6778888899888877654332111  2 24


Q ss_pred             cccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEe
Q 020314          219 KYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTV  297 (327)
Q Consensus       219 ~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~  297 (327)
                      ++|+++|++++ .....++++++++|+++.++.............+..++.++.+.. ......++.+++++.++.+.+ 
T Consensus       225 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~~l~~-  302 (330)
T cd08245         225 GADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGST-HGGRADLQEALDFAAEGKVKP-  302 (330)
T ss_pred             CCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEec-cCCHHHHHHHHHHHHcCCCcc-
Confidence            69999999875 457889999999999999985432212111222334455555432 234678889999999999876 


Q ss_pred             cceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          298 IDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       298 ~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      ..+.+++++++++++.+.++...||+|+
T Consensus       303 ~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         303 MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            4468999999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=2.8e-35  Score=261.70  Aligned_cols=295  Identities=21%  Similarity=0.284  Sum_probs=231.3

Q ss_pred             cceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHh-cCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEc
Q 020314           20 AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQK-GMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL   98 (327)
Q Consensus        20 ~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~-g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~   98 (327)
                      +.+++++.++|++.++||+||+.++++|+.|++... +.++.. ...+|.++|+|++|+|+++|++++++++||+|++..
T Consensus         7 ~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~-~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~   85 (339)
T cd08232           7 GDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTV-RLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNP   85 (339)
T ss_pred             CceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcc-cccCCeecCccceEEEEeeCCCCCcCCCCCEEEEcc
Confidence            349999999999999999999999999999998763 333211 124578999999999999999999999999998621


Q ss_pred             --------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCC
Q 020314           99 --------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGV  146 (327)
Q Consensus        99 --------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~  146 (327)
                                                      .+|+|++|+.++.+.++++|++++.++++. ..++.++|+++.+. ..
T Consensus        86 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~-~~  163 (339)
T cd08232          86 SRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRA-GD  163 (339)
T ss_pred             CCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhc-CC
Confidence                                            258999999999999999999999999876 57888999998543 33


Q ss_pred             ccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314          147 KLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       147 ~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                           .++++|||.| +|++|++++++|+++|+ ++++++++ ++.++++++|.+.+++++..+.... ....+++|+++
T Consensus       164 -----~~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~-~~~~~~vd~vl  236 (339)
T cd08232         164 -----LAGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAY-AADKGDFDVVF  236 (339)
T ss_pred             -----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhh-hccCCCccEEE
Confidence                 4789999987 79999999999999999 78888754 5667888999999888765431111 11234699999


Q ss_pred             eCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE--eccee
Q 020314          225 NCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VIDSK  301 (327)
Q Consensus       225 d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~  301 (327)
                      |+.|+ ..+..++++|+++|+++.+|..... .........+++..+.+..  ...+.++.++++++.+.+++  .+.+.
T Consensus       237 d~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~  313 (339)
T cd08232         237 EASGAPAALASALRVVRPGGTVVQVGMLGGP-VPLPLNALVAKELDLRGSF--RFDDEFAEAVRLLAAGRIDVRPLITAV  313 (339)
T ss_pred             ECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-ccCcHHHHhhcceEEEEEe--cCHHHHHHHHHHHHcCCCCchhheeEE
Confidence            99986 4588899999999999999854311 1111222244555555533  23567889999999998863  35678


Q ss_pred             eccccHHHHHHHHhcCCCCccEEEeC
Q 020314          302 HSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       302 ~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      |++++++++++.+.++...||+|+++
T Consensus       314 ~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         314 FPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             ecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            99999999999999888899999864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=2.2e-35  Score=264.68  Aligned_cols=307  Identities=22%  Similarity=0.253  Sum_probs=235.0

Q ss_pred             ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      +|++.+++.+    +.+++++.+.|.+.++||+||+.++++|++|++...+.........+|.++|||++|+|+++|+++
T Consensus        17 ~~~~~~~~~~----~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
T PLN02702         17 ENMAAWLVGV----NTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEV   92 (364)
T ss_pred             ccceEEEecC----CceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCC
Confidence            3444555443    348888888888999999999999999999999887632110011357799999999999999999


Q ss_pred             CCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHH
Q 020314           86 KNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAH  137 (327)
Q Consensus        86 ~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  137 (327)
                      +++++||+|++.+                            .+|+|++|+.++...++++|+++++++++.. .++.+++
T Consensus        93 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~  171 (364)
T PLN02702         93 KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGV  171 (364)
T ss_pred             CCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHH
Confidence            9999999998621                            1589999999999999999999999988753 3445688


Q ss_pred             HHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEec-CCcHHHHHhcCCCEEEeCCC--CCc--cc
Q 020314          138 QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCG-ARNIELVKSLGADEVLDYKT--PDG--AA  211 (327)
Q Consensus       138 ~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~-~~~~~~~~~lg~~~v~~~~~--~~~--~~  211 (327)
                      +++ +..++     .++++|+|+| +|++|++++++|+.+|++ ++++.+ +++.++++++|++.++++..  .+.  .+
T Consensus       172 ~~~-~~~~~-----~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  244 (364)
T PLN02702        172 HAC-RRANI-----GPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEV  244 (364)
T ss_pred             HHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHH
Confidence            887 67777     7899999997 799999999999999996 555553 36778889999998876542  221  11


Q ss_pred             c--cCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHH
Q 020314          212 L--KSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL  288 (327)
Q Consensus       212 ~--~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (327)
                      .  ....++++|++||++|+ ..+..++++++++|+++.+|..... .......+.++++++.+.+.  ....++.++++
T Consensus       245 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~  321 (364)
T PLN02702        245 EEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNE-MTVPLTPAAAREVDVVGVFR--YRNTWPLCLEF  321 (364)
T ss_pred             HHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC-CcccHHHHHhCccEEEEecc--ChHHHHHHHHH
Confidence            1  11334579999999995 4589999999999999999854321 22233445667777776432  24578889999


Q ss_pred             HHCCcee--Eecceeecc--ccHHHHHHHHhcCCCCccEEEeC
Q 020314          289 VKEGKLK--TVIDSKHSL--SKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       289 ~~~g~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++.+.  +.+.+.|++  +++++|++.+.+++..+|+++.+
T Consensus       322 ~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~~  364 (364)
T PLN02702        322 LRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL  364 (364)
T ss_pred             HHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEeC
Confidence            9999875  345677555  79999999999888889999863

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=4.5e-35  Score=258.49  Aligned_cols=313  Identities=28%  Similarity=0.418  Sum_probs=250.1

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||++.+...+. +..+++++.+.+.+.+++++||+.++++|+.|+....+.++.  +..+|..+|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~   77 (325)
T TIGR02824         1 MKAIEITEPGG-PEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPP--PPGASDILGLEVAGEVVAVGEGVS   77 (325)
T ss_pred             CceEEEccCCC-cccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCCCccceeEEEEEEeCCCCC
Confidence            68889877664 566777777777789999999999999999999988776531  124578999999999999999999


Q ss_pred             CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314           87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV  166 (327)
Q Consensus        87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~  166 (327)
                      ++++||+|+++..+|++++|+.++...++++|+++++.+++.++.++.++|+++.+...+     +++++++|+|++|++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~-----~~~~~vlv~g~~~~~  152 (325)
T TIGR02824        78 RWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGL-----KAGETVLIHGGASGI  152 (325)
T ss_pred             CCCCCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCC-----CCCCEEEEEcCcchH
Confidence            999999999976669999999999999999999999999999999999999998778888     889999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCc
Q 020314          167 GLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG  243 (327)
Q Consensus       167 G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G  243 (327)
                      |.+++++++..|+++++++++ ++.+.++.+|.+.+++....+  ..+.....++++|+++|++|+..+..++++++++|
T Consensus       153 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g  232 (325)
T TIGR02824       153 GTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDG  232 (325)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCc
Confidence            999999999999999988854 566777888988777665443  22333445567999999999877888899999999


Q ss_pred             EEEeecCCchhHHHHhhhhccccceeeEEEEeCC---------CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314          244 KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP---------KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS  314 (327)
Q Consensus       244 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~  314 (327)
                      +++.+|........+....+..++..+.+.....         ..+.+..++++++++.+.+...+.+++++++++++.+
T Consensus       233 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  312 (325)
T TIGR02824       233 RIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALM  312 (325)
T ss_pred             EEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHH
Confidence            9999875331111112222223444444432211         1234567888999999887777889999999999999


Q ss_pred             hcCCCCccEEEeC
Q 020314          315 ISGRATGKIIVEP  327 (327)
Q Consensus       315 ~~~~~~gkvvv~~  327 (327)
                      .++...||+++++
T Consensus       313 ~~~~~~~~~v~~~  325 (325)
T TIGR02824       313 ESGDHIGKIVLTV  325 (325)
T ss_pred             HhCCCcceEEEeC
Confidence            9988889999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.8e-35  Score=255.20  Aligned_cols=272  Identities=24%  Similarity=0.375  Sum_probs=224.0

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||+|++++.+  +..+++++.+.|++.++||+||+.++++|+.|++...|.+.   +...|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~~--~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~   75 (306)
T cd08258           1 MKALVKTGPG--PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVE   75 (306)
T ss_pred             CeeEEEecCC--CCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcC
Confidence            5899987643  45699999999999999999999999999999998888753   234578999999999999999999


Q ss_pred             CCCCCCEEEEEcc----------------------------CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           87 NFKVGDKVVAVLS----------------------------GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        87 ~~~~Gd~V~~~~~----------------------------~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      .+++||+|++...                            .|+|++|++++...++++|+++++++++ +..++.++|+
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~  154 (306)
T cd08258          76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH  154 (306)
T ss_pred             cCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence            9999999988531                            4899999999999999999999999887 6777889999


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-C--CcHHHHHhcCCCEEEeCCCCCc--cccc
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-A--RNIELVKSLGADEVLDYKTPDG--AALK  213 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~--~~~~~~~~lg~~~v~~~~~~~~--~~~~  213 (327)
                      ++....++     +++++|+|.| +|++|.+++++|+..|++|+++.+ +  ++.++++++|++.+ ++...+.  .+..
T Consensus       155 ~l~~~~~~-----~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~  227 (306)
T cd08258         155 AVAERSGI-----RPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNE  227 (306)
T ss_pred             HHHHhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHH
Confidence            99888887     8899999976 799999999999999999887742 2  36677889999877 7655442  2334


Q ss_pred             CCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCC
Q 020314          214 SPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG  292 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  292 (327)
                      ...++++|+++|++|+ ..+..++++++++|+++.+|........+....+.++++++.+.. ....++++++++++++|
T Consensus       228 ~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~-~~~~~~~~~~~~~~~~~  306 (306)
T cd08258         228 ITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSR-SSTPASWETALRLLASG  306 (306)
T ss_pred             HcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEe-cCchHhHHHHHHHHhcC
Confidence            4556789999999975 457888999999999999987653333444556667899998844 45677899999998875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.1e-34  Score=256.24  Aligned_cols=313  Identities=29%  Similarity=0.414  Sum_probs=247.3

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||+|++...+. ++.+++++.+.|.+.+++++|++.++++|+.|.....+.....  ...|..+|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~   77 (328)
T cd08268           1 MRAVRFHQFGG-PEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVT   77 (328)
T ss_pred             CeEEEEeccCC-cceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCC
Confidence            68999987664 5668888888888999999999999999999999887765321  23477899999999999999999


Q ss_pred             CCCCCCEEEEEc-----cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314           87 NFKVGDKVVAVL-----SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus        87 ~~~~Gd~V~~~~-----~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      ++++||+|+++.     ..|++++|+.++.+.++++|+++++.+++.++.++.++|+++.....+     .++++++|+|
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vli~g  152 (328)
T cd08268          78 GFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGL-----RPGDSVLITA  152 (328)
T ss_pred             cCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCC-----CCCCEEEEec
Confidence            999999999864     348999999999999999999999999999999999999999777777     7899999999


Q ss_pred             CCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccc
Q 020314          162 ASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPN  238 (327)
Q Consensus       162 ~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  238 (327)
                      ++|++|++++++++..|++++.++++ ++.+.+..+|.+.+++....+  ..+.....++++|++++++++.....++++
T Consensus       153 ~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  232 (328)
T cd08268         153 ASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADA  232 (328)
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHh
Confidence            99999999999999999999988854 567777788888887766543  223334455679999999998778888999


Q ss_pred             cCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC---CCH----HHHHHHHHHHHCCceeEecceeeccccHHHHH
Q 020314          239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS---PKG----ENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAW  311 (327)
Q Consensus       239 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~  311 (327)
                      ++++|+++.+|................++..+.+....   .++    ..++.+.+++..+.+.+.....|+++++.+++
T Consensus       233 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (328)
T cd08268         233 LAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAH  312 (328)
T ss_pred             hccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHH
Confidence            99999999987542211111111122233333332211   122    34455666777888877777889999999999


Q ss_pred             HHHhcCCCCccEEEeC
Q 020314          312 AKSISGRATGKIIVEP  327 (327)
Q Consensus       312 ~~~~~~~~~gkvvv~~  327 (327)
                      +.+.++...||+++++
T Consensus       313 ~~~~~~~~~~~vv~~~  328 (328)
T cd08268         313 RYLESGQQIGKIVVTP  328 (328)
T ss_pred             HHHHcCCCCceEEEeC
Confidence            9999988889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1e-33  Score=251.26  Aligned_cols=311  Identities=31%  Similarity=0.425  Sum_probs=242.6

Q ss_pred             EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314            8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN   87 (327)
Q Consensus         8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   87 (327)
                      |++.+...+. ++.+++++.+.|++.+++|+||+.++++|+.|++...|..+.  ....|..+|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~   77 (337)
T cd08275           1 RAVVLTGFGG-LDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKD   77 (337)
T ss_pred             CeEEEcCCCC-ccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcC
Confidence            4677766654 456888888888899999999999999999999988876532  1145778999999999999999999


Q ss_pred             CCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHH
Q 020314           88 FKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG  167 (327)
Q Consensus        88 ~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G  167 (327)
                      +++||+|+++...|++++|..++.+.++++|+++++.+++.+++++.++|+++.+..++     +++++|+|+|++|++|
T Consensus        78 ~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vli~g~~g~~g  152 (337)
T cd08275          78 FKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL-----RPGQSVLVHSAAGGVG  152 (337)
T ss_pred             CCCCCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC-----CCCCEEEEEcCcchHH
Confidence            99999999976669999999999999999999999999999999999999999888887     8999999999889999


Q ss_pred             HHHHHHHHhC-CCeEEEEecCCcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCcccccccccCCCcE
Q 020314          168 LYAVQLAKLG-NTHVTATCGARNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK  244 (327)
Q Consensus       168 ~~~~~la~~~-g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~  244 (327)
                      ++++++|+.. +..++...++++.+.++.+|.+.+++....+.  .+...+ ++++|+++||+|+.....++++++++|+
T Consensus       153 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~v~~~~g~~~~~~~~~~l~~~g~  231 (337)
T cd08275         153 LAAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKIS-PEGVDIVLDALGGEDTRKSYDLLKPMGR  231 (337)
T ss_pred             HHHHHHHHHccCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHh-CCCceEEEECCcHHHHHHHHHhhccCcE
Confidence            9999999988 33332222234677778899988887765442  222233 4679999999998778889999999999


Q ss_pred             EEeecCCchh---HHH-------------HhhhhccccceeeEEEEe----CCC---HHHHHHHHHHHHCCceeEeccee
Q 020314          245 VIDFNPSPRV---LLT-------------FAWKKLTFSKKQLVPFSV----SPK---GENLDFLVKLVKEGKLKTVIDSK  301 (327)
Q Consensus       245 ~v~~g~~~~~---~~~-------------~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~g~l~~~~~~~  301 (327)
                      ++.+|.....   ...             ........++..+.+...    ...   ...+.++++++.++.+.+.....
T Consensus       232 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (337)
T cd08275         232 LVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSV  311 (337)
T ss_pred             EEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeE
Confidence            9998854311   000             000122233333333221    111   23467888999999988777788


Q ss_pred             eccccHHHHHHHHhcCCCCccEEEeC
Q 020314          302 HSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       302 ~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      |++++++++++.+.++...||+++++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         312 FPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             EcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            99999999999999998889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=3.7e-34  Score=250.27  Aligned_cols=289  Identities=27%  Similarity=0.412  Sum_probs=234.4

Q ss_pred             CCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEc--cCccccee
Q 020314           29 VPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL--SGGGLAEF  106 (327)
Q Consensus        29 ~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~--~~g~~a~~  106 (327)
                      .|++.+++|+||+.++++|+.|++...+.++..  ..+|.++|+|++|+|+++|++++++++||+|+++.  ..|+|++|
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~   79 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTM--PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATL   79 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCC--CCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeE
Confidence            467889999999999999999999988876421  24678999999999999999999999999999864  35899999


Q ss_pred             EeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          107 AVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       107 ~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +.++.+.++++|+++++++++.++.++.++|+++ +..++     +++++++|+++++++|++++++++++|++++++++
T Consensus        80 ~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~-----~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~  153 (303)
T cd08251          80 VTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGL-----AKGEHILIQTATGGTGLMAVQLARLKGAEIYATAS  153 (303)
T ss_pred             EEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCC-----CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcC
Confidence            9999999999999999999999999999999998 56677     89999999999999999999999999999999885


Q ss_pred             C-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchh-----HHHH
Q 020314          187 A-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRV-----LLTF  258 (327)
Q Consensus       187 ~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~  258 (327)
                      . ++.+.++.+|.+.+++....+  ..+...+.++++|+++|++++.....++++++++|+++.++.....     ....
T Consensus       154 ~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~  233 (303)
T cd08251         154 SDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV  233 (303)
T ss_pred             CHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhH
Confidence            4 677788899999888876654  2244455667899999999877788889999999999998743211     1111


Q ss_pred             hhhhccccceeeEEEEeC---CCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          259 AWKKLTFSKKQLVPFSVS---PKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      ...+..++...+......   ...+.+.+++++++++.+++...+.|++++++++++.+.+++..||+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         234 LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            222333344333321111   1234577888999999998777788999999999999999988888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=2.8e-33  Score=246.75  Aligned_cols=311  Identities=32%  Similarity=0.448  Sum_probs=246.6

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCC-CCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPN-KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~-~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      |+|+++...+. ++.+++.+.+ |.+. +++++|++.++++|+.|++...|.+..  ....|..+|+|++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~   76 (323)
T cd08241           1 MKAVVCKELGG-PEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGV   76 (323)
T ss_pred             CeEEEEecCCC-cceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCC
Confidence            68999886654 4567777777 6656 499999999999999999988776531  11335689999999999999999


Q ss_pred             CCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCCh
Q 020314           86 KNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA  165 (327)
Q Consensus        86 ~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~  165 (327)
                      +.+++||+|+++...|++++++.++.+.++++|++++..+++.+..++.+||+++.+..++     +++++|+|+|++|+
T Consensus        77 ~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~vli~g~~~~  151 (323)
T cd08241          77 TGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARL-----QPGETVLVLGAAGG  151 (323)
T ss_pred             CCCCCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCC-----CCCCEEEEEcCCch
Confidence            9999999999965478999999999999999999999999999999999999998777777     88999999998899


Q ss_pred             HHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCC
Q 020314          166 VGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTT  242 (327)
Q Consensus       166 ~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~  242 (327)
                      +|++++++++..|++++.++++ ++.+.++++|.+.+++....+  ..+...+.++++|.++|++|+.....++++++++
T Consensus       152 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~  231 (323)
T cd08241         152 VGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWG  231 (323)
T ss_pred             HHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccC
Confidence            9999999999999999988854 677778888988887766544  2233445566899999999987788899999999


Q ss_pred             cEEEeecCCchhHHHHhhhhccccceeeEEEEeC----C----CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314          243 GKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS----P----KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS  314 (327)
Q Consensus       243 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~  314 (327)
                      |+++.+|........+.......++..+.+....    .    ..+.++.+++++.++.+.+.....|++++++++++.+
T Consensus       232 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (323)
T cd08241         232 GRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRAL  311 (323)
T ss_pred             CEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHH
Confidence            9999988532211101111122334444443211    1    1356788999999999887777889999999999999


Q ss_pred             hcCCCCccEEEe
Q 020314          315 ISGRATGKIIVE  326 (327)
Q Consensus       315 ~~~~~~gkvvv~  326 (327)
                      .++...||++++
T Consensus       312 ~~~~~~~~vvv~  323 (323)
T cd08241         312 ADRKATGKVVLT  323 (323)
T ss_pred             HhCCCCCcEEeC
Confidence            988888898864

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=3e-32  Score=222.60  Aligned_cols=311  Identities=23%  Similarity=0.267  Sum_probs=241.1

Q ss_pred             ceEEEEEeccCCC---ccceEEee--ccC-CCCCCCeEEEEEeEEeeChhhHHHHhcCCCC-CCCCCCC--eeecccceE
Q 020314            6 VMHAVQYDSYGGG---VAGLKHVE--VPV-PTPNKDEALLKVEAASINPIDWKLQKGMLRP-FLPRKFP--FIPASDVAG   76 (327)
Q Consensus         6 ~~~a~~~~~~g~~---~~~l~~~~--~~~-~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~p--~~~G~e~~G   76 (327)
                      +.+.|++..+-.+   ..++.+.+  .++ .++.+++|+||++|.+.+|.....++...+. +.+.-.|  .+.| ..+|
T Consensus         3 ~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~   81 (343)
T KOG1196|consen    3 TNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVA   81 (343)
T ss_pred             cccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceE
Confidence            4677888763221   23455443  333 3478889999999999999987766543332 1111011  2344 6789


Q ss_pred             EEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCc--eeeCC--CCCChhh-hcccCchHHHHHHHHHHhhCCccCCC
Q 020314           77 EVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESL--TVARP--QEVSAAE-GAGIPCAGLTAHQALTQSLGVKLDGS  151 (327)
Q Consensus        77 ~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~--~~~ip--~~~~~~~-aa~~~~~~~ta~~al~~~~~~~~~~~  151 (327)
                      +|++  ++.+++++||.|.+..   +|.+|.+++...  .++++  .++++.- ..++.++..|||-++.+....     
T Consensus        82 kVi~--S~~~~~~~GD~v~g~~---gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p-----  151 (343)
T KOG1196|consen   82 KVID--SGHPNYKKGDLVWGIV---GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP-----  151 (343)
T ss_pred             EEEe--cCCCCCCcCceEEEec---cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC-----
Confidence            9999  6778899999999975   999999997653  33433  4444444 455678899999999988888     


Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHH-HhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELV-KSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~-~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~  227 (327)
                      ++|++|+|.||+|.+|+.+.|+|+.+|++|++++ +.+|.+++ .++|.|..+||.++.  .+.++....+|+|+.||++
T Consensus       152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV  231 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV  231 (343)
T ss_pred             CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence            9999999999999999999999999999999999 55888877 488999999999874  4567778889999999999


Q ss_pred             CCCcccccccccCCCcEEEeecCCch-----hHHHHhhhhccccceeeEEEEeCC----CHHHHHHHHHHHHCCceeEec
Q 020314          228 TGIPWSTFEPNLGTTGKVIDFNPSPR-----VLLTFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKLKTVI  298 (327)
Q Consensus       228 g~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~  298 (327)
                      |+..++..+..|+..||++.+|.-+.     ...--.+..+.++++++.++....    ..+.++.+..++++|+|+..-
T Consensus       232 GG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~e  311 (343)
T KOG1196|consen  232 GGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVE  311 (343)
T ss_pred             CcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEeh
Confidence            99999999999999999999985331     111224467788999998865422    356678899999999999877


Q ss_pred             ceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          299 DSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       299 ~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +-.-.+++.|.||..|.+|++.||.++.+
T Consensus       312 di~~Glen~P~A~vglf~GkNvGKqiv~v  340 (343)
T KOG1196|consen  312 DIADGLENGPSALVGLFHGKNVGKQLVKV  340 (343)
T ss_pred             hHHHHHhccHHHHHHHhccCcccceEEEe
Confidence            76678999999999999999999999864

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.4e-33  Score=243.80  Aligned_cols=231  Identities=19%  Similarity=0.237  Sum_probs=187.4

Q ss_pred             eecccceEEEEecCCCCC------CCCCCCEEEEEc----------------------------------cCcccceeEe
Q 020314           69 IPASDVAGEVIGLGSEVK------NFKVGDKVVAVL----------------------------------SGGGLAEFAV  108 (327)
Q Consensus        69 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~----------------------------------~~g~~a~~~~  108 (327)
                      ++|||++|+|+++|++++      ++++||||+..+                                  .+|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            479999999999999999      899999997632                                  1489999999


Q ss_pred             ecCC-ceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEe-
Q 020314          109 AKES-LTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATC-  185 (327)
Q Consensus       109 ~~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~-  185 (327)
                      ++++ .++++|+++++++++.+++.+.|+|+++. ....     .++++|||+| +|++|++++|+|+++|++ |++++ 
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~-----~~g~~VlV~G-~G~vG~~~~~~ak~~G~~~Vi~~~~  153 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGD-----LKGRRVLVVG-AGMLGLTAAAAAAAAGAARVVAADP  153 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC
Confidence            9997 79999999999999999999999999984 4444     6899999998 599999999999999996 77776 


Q ss_pred             cCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc-hhHHHHhhhhc
Q 020314          186 GARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKL  263 (327)
Q Consensus       186 ~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~  263 (327)
                      +++|+++++++|++.++++.+......+.+.+.++|++||++|.+. +..++++++++|+++.+|... .....+....+
T Consensus       154 ~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~  233 (280)
T TIGR03366       154 SPDRRELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV  233 (280)
T ss_pred             CHHHHHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHH
Confidence            4478889999999998876543222334455678999999999765 889999999999999999543 22234445667


Q ss_pred             cccceeeEEEEeCCCHHHHHHHHHHHHCC--ce--eEecceeeccccH
Q 020314          264 TFSKKQLVPFSVSPKGENLDFLVKLVKEG--KL--KTVIDSKHSLSKA  307 (327)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~l--~~~~~~~~~~~~~  307 (327)
                      .++++++.+ +.....++++++++++.++  ++  +.+++++|+++|+
T Consensus       234 ~~~~~~i~g-~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       234 VRRWLTIRG-VHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             HhCCcEEEe-cCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            778888887 3445667899999999974  43  3578889999873

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=100.00  E-value=3e-32  Score=236.58  Aligned_cols=280  Identities=28%  Similarity=0.360  Sum_probs=225.9

Q ss_pred             CeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCce
Q 020314           35 DEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLT  114 (327)
Q Consensus        35 ~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~  114 (327)
                      +||+||+.++++|++|++...|..+     .+|.++|||++|+|+++|++++++++||+|+++ ..|+|++|+.++.+.+
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~-----~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-~~g~~~~~~~~~~~~~   74 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLP-----GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL-APGAFATHVRVDARLV   74 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCC-----CCCCccceeeeEEEEeecCCccCCCCCCEEEEE-ecCcccceEEechhhe
Confidence            5899999999999999999887642     457899999999999999999999999999985 3689999999999999


Q ss_pred             eeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH
Q 020314          115 VARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV  193 (327)
Q Consensus       115 ~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~  193 (327)
                      +++|+++++.+++.+++++.++|+++.+..++     ++|++|+|+|++|++|++++++++.+|+++++++++ ++.+.+
T Consensus        75 ~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  149 (293)
T cd05195          75 VKIPDSLSFEEAATLPVAYLTAYYALVDLARL-----QKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFL  149 (293)
T ss_pred             EeCCCCCCHHHHhhchHHHHHHHHHHHHHhcc-----CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            99999999999999999999999999777777     899999999999999999999999999999988865 677777


Q ss_pred             HhcC--CCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchh-----HHHHhhhhcc
Q 020314          194 KSLG--ADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRV-----LLTFAWKKLT  264 (327)
Q Consensus       194 ~~lg--~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~  264 (327)
                      +.++  ++.+++....+  ..+.+.+.++++|+++|++|+..+..++++++++|+++.+|.....     ........+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~  229 (293)
T cd05195         150 RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFLRNVS  229 (293)
T ss_pred             HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhhhccCCe
Confidence            7777  67777765433  2334445567899999999988888999999999999998854321     1111112233


Q ss_pred             ccceeeEEEEeC---CCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          265 FSKKQLVPFSVS---PKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       265 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      ++...+..+...   ...+.+..++++++++++++.....+++++++++++.+..++..||+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         230 FSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             EEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            333322221111   1134678888999999998888888999999999999999888888764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=100.00  E-value=1.9e-31  Score=231.21  Aligned_cols=275  Identities=27%  Similarity=0.382  Sum_probs=219.1

Q ss_pred             EEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCC
Q 020314           39 LKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARP  118 (327)
Q Consensus        39 V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip  118 (327)
                      ||+.++++|+.|++...|.++      .|.++|||++|+|+++|++++.+++||+|+++ ..|+|++|+.++.+.++++|
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~------~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~-~~g~~~~~~~~~~~~~~~~p   74 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP------GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL-APGSFATYVRTDARLVVPIP   74 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC------CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE-cCCceeeEEEccHHHeEECC
Confidence            899999999999999887642      35789999999999999999999999999985 35899999999999999999


Q ss_pred             CCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcC
Q 020314          119 QEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLG  197 (327)
Q Consensus       119 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg  197 (327)
                      +++++.+++.+++++.++|+++.+...+     .++++|+|+|++|.+|++++++++..|++|+++++ +++.+.++++|
T Consensus        75 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g  149 (288)
T smart00829       75 DGLSFEEAATVPVVFLTAYYALVDLARL-----RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELG  149 (288)
T ss_pred             CCCCHHHHHhchHHHHHHHHHHHHHhCC-----CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC
Confidence            9999999999999999999998777777     89999999999999999999999999999999884 46788888999


Q ss_pred             C--CEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCch---hHHH--Hhhhhccccce
Q 020314          198 A--DEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPR---VLLT--FAWKKLTFSKK  268 (327)
Q Consensus       198 ~--~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~--~~~~~~~~~~~  268 (327)
                      +  +.++++...+  ..+.....++++|+++|++++..+..++++++++|+++.+|....   ....  ...+.+.++..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  229 (288)
T smart00829      150 IPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAPFRRNVSYHAV  229 (288)
T ss_pred             CChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhhhcCCceEEEE
Confidence            8  6777765544  223344555679999999997778889999999999999985431   1111  01122222222


Q ss_pred             eeEEEEeCC--CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          269 QLVPFSVSP--KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       269 ~~~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      .+......+  ..+.+..++++++.+++.+...+.|++++++++++.+..+...||+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      230 DLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             EHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            221111011  124567788999999887666678999999999999999887788764

Enoylreductase in Polyketide synthases.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=100.00  E-value=1.5e-32  Score=256.34  Aligned_cols=293  Identities=22%  Similarity=0.275  Sum_probs=245.7

Q ss_pred             ccceEEeeccCC---CCCCCeEEEEEeEEeeChhhHHHHhcCCCC-CCCC---CCCeeecccceEEEEecCCCCCCCCCC
Q 020314           19 VAGLKHVEVPVP---TPNKDEALLKVEAASINPIDWKLQKGMLRP-FLPR---KFPFIPASDVAGEVIGLGSEVKNFKVG   91 (327)
Q Consensus        19 ~~~l~~~~~~~~---~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-~~~~---~~p~~~G~e~~G~V~~vG~~~~~~~~G   91 (327)
                      ...++|.+.+..   +..++.=+-.|.|+++|..|+.+..|+.++ .+|.   ...+.+|-||+|+          .+-|
T Consensus      1426 lsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~G 1495 (2376)
T KOG1202|consen 1426 LSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASG 1495 (2376)
T ss_pred             ccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCC
Confidence            566777776654   245666688899999999999999999864 3333   2347899999997          4669


Q ss_pred             CEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHH
Q 020314           92 DKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAV  171 (327)
Q Consensus        92 d~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~  171 (327)
                      .||+++....++++.+.++.++++.+|++..+++|+..|+.|.|+||||..+++.     ++|+++|||+|+|++|++++
T Consensus      1496 rRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~m-----kkGekiLIHaGsGGVGQAAI 1570 (2376)
T KOG1202|consen 1496 RRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQM-----KKGEKILIHAGSGGVGQAAI 1570 (2376)
T ss_pred             cEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccc-----cCCcEEEEecCCCchhHHHH
Confidence            9999999889999999999999999999999999999999999999999999988     99999999999999999999


Q ss_pred             HHHHhCCCeEEEEec-CCcHHHHH----hcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCcccccccccCCCcE
Q 020314          172 QLAKLGNTHVTATCG-ARNIELVK----SLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK  244 (327)
Q Consensus       172 ~la~~~g~~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~  244 (327)
                      .+|.++|++||.++. .+|++++.    ++....+-|+++.++  .++..+.|+|+|+|+|+...+.++.+++||+.+||
T Consensus      1571 aiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GR 1650 (2376)
T KOG1202|consen 1571 AIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGR 1650 (2376)
T ss_pred             HHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCe
Confidence            999999999999994 57887664    444556667766664  36677899999999999999999999999999999


Q ss_pred             EEeec-----CCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHC----CceeEecceeeccccHHHHHHHHh
Q 020314          245 VIDFN-----PSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE----GKLKTVIDSKHSLSKAEDAWAKSI  315 (327)
Q Consensus       245 ~v~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~l~~~~~~~~~~~~~~~a~~~~~  315 (327)
                      +..+|     ..+...+...+++.+|+++.+.. ......+.|+++..++++    |..+|+.+++|+-.++++||++|.
T Consensus      1651 FLEIGKfDLSqNspLGMavfLkNvsfHGiLLDs-vmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMa 1729 (2376)
T KOG1202|consen 1651 FLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDS-VMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMA 1729 (2376)
T ss_pred             eeeecceecccCCcchhhhhhcccceeeeehhh-hhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHh
Confidence            98887     33445566677777777776655 334566777877777765    457899999999999999999999


Q ss_pred             cCCCCccEEEeC
Q 020314          316 SGRATGKIIVEP  327 (327)
Q Consensus       316 ~~~~~gkvvv~~  327 (327)
                      +|++.||||+++
T Consensus      1730 sGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1730 SGKHIGKVVIKV 1741 (2376)
T ss_pred             ccCccceEEEEE
Confidence            999999999863

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.6e-30  Score=223.61  Aligned_cols=243  Identities=31%  Similarity=0.408  Sum_probs=197.0

Q ss_pred             eEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEc-----------------
Q 020314           36 EALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL-----------------   98 (327)
Q Consensus        36 eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-----------------   98 (327)
                      ||+|++.++++|+.|++...|..+  ....+|.++|+|++|+|+++|++++.+++||+|++..                 
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~   78 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGG   78 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCC
Confidence            689999999999999999988753  1125678999999999999999999999999999865                 


Q ss_pred             ------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHH
Q 020314           99 ------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ  172 (327)
Q Consensus        99 ------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~  172 (327)
                            ..|++++|..++.+.++++|+++++++++.++.++.+||+++.....+     +++++|||+|+++ +|+++++
T Consensus        79 ~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~-----~~~~~vli~g~~~-~G~~~~~  152 (271)
T cd05188          79 GILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVL-----KPGDTVLVLGAGG-VGLLAAQ  152 (271)
T ss_pred             CEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCC-----CCCCEEEEECCCH-HHHHHHH
Confidence                  268999999999999999999999999999999999999999877776     7899999999766 9999999


Q ss_pred             HHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEee
Q 020314          173 LAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       173 la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  248 (327)
                      +++..|.+|++++++ ++.+.++.+|.+.++++...+.  .+. ...++++|+++|++++ .....++++++++|+++.+
T Consensus       153 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~  231 (271)
T cd05188         153 LAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVV  231 (271)
T ss_pred             HHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEE
Confidence            999999999999855 6777888899888887665442  222 4455789999999998 6688899999999999999


Q ss_pred             cCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHH
Q 020314          249 NPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL  288 (327)
Q Consensus       249 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (327)
                      +................++..+.+.. .....++++++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  270 (271)
T cd05188         232 GGTSGGPPLDDLRRLLFKELTIIGST-GGTREDFEEALDL  270 (271)
T ss_pred             ccCCCCCCcccHHHHHhcceEEEEee-cCCHHHHHHHHhh
Confidence            86543222212334455666776643 3455567666654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=3.3e-28  Score=210.22  Aligned_cols=245  Identities=25%  Similarity=0.314  Sum_probs=189.2

Q ss_pred             CCCCeeecccceEEEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHh
Q 020314           64 RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQS  143 (327)
Q Consensus        64 ~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~  143 (327)
                      -.+|.++|||++|+|+++|++++++++||+|+++   +.|++|+.++.+.++++|+++++.+++.+ .++.+||+++. .
T Consensus        18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~   92 (277)
T cd08255          18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVR-D   92 (277)
T ss_pred             CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-h
Confidence            3578999999999999999999999999999985   47999999999999999999999999888 78999999984 6


Q ss_pred             hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHHHHHhcC-CCEEEeCCCCCcccccCCCCCcc
Q 020314          144 LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIELVKSLG-ADEVLDYKTPDGAALKSPSGRKY  220 (327)
Q Consensus       144 ~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~~~~~lg-~~~v~~~~~~~~~~~~~~~~~~~  220 (327)
                      .++     +++++++|+| +|.+|++++++|+++|++ |++++++ ++.+.++++| ++.+++..+      ..+.++++
T Consensus        93 ~~~-----~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~  160 (277)
T cd08255          93 AEP-----RLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA------DEIGGRGA  160 (277)
T ss_pred             cCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch------hhhcCCCC
Confidence            777     8999999997 799999999999999998 9888854 6778888898 455443322      11245679


Q ss_pred             cEEEeCCCCC-cccccccccCCCcEEEeecCCchhH----HHHhhhhccccceeeEEEEe------CCCHHHHHHHHHHH
Q 020314          221 DAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVL----LTFAWKKLTFSKKQLVPFSV------SPKGENLDFLVKLV  289 (327)
Q Consensus       221 d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~  289 (327)
                      |++||+++.. ....++++++++|+++.+|......    ..+..+.+.+....+.....      ....+.++++++++
T Consensus       161 d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  240 (277)
T cd08255         161 DVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL  240 (277)
T ss_pred             CEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence            9999998854 4788899999999999998643321    01111111222222111100      01235789999999


Q ss_pred             HCCceeEecceeeccccHHHHHHHHhcC-CCCccEEE
Q 020314          290 KEGKLKTVIDSKHSLSKAEDAWAKSISG-RATGKIIV  325 (327)
Q Consensus       290 ~~g~l~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv  325 (327)
                      +++.+++.+.+.|++++++++++.+.++ ....|+++
T Consensus       241 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         241 AEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             HcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            9999988778899999999999999877 23456653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.78  E-value=1.9e-18  Score=127.27  Aligned_cols=82  Identities=38%  Similarity=0.557  Sum_probs=70.2

Q ss_pred             CCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCCCCCCCEEEEEc---------------
Q 020314           34 KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL---------------   98 (327)
Q Consensus        34 ~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~---------------   98 (327)
                      |+||+||+.++|||++|++.+.|...  ....+|.++|||++|+|+++|+++++|++||||+...               
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~   78 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPP--PPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP   78 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSS--STSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccc--cCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence            68999999999999999999999521  1347899999999999999999999999999998855               


Q ss_pred             ------------cCcccceeEeecCCceeeC
Q 020314           99 ------------SGGGLAEFAVAKESLTVAR  117 (327)
Q Consensus        99 ------------~~g~~a~~~~~~~~~~~~i  117 (327)
                                  .+|+|+||+.+++++++++
T Consensus        79 ~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   79 NLCPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             ccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence                        5799999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.66  E-value=9.3e-17  Score=122.43  Aligned_cols=126  Identities=30%  Similarity=0.396  Sum_probs=106.7

Q ss_pred             hHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCC-CCcccccccccC
Q 020314          165 AVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVT-GIPWSTFEPNLG  240 (327)
Q Consensus       165 ~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~  240 (327)
                      ++|++++|+|++.|++|++++++ +|+++++++|++.++++++.+  ..+.+.++++++|++|||+| ++.++.++++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~   80 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR   80 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence            68999999999999999999965 689999999999999998876  34555566679999999999 555999999999


Q ss_pred             CCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHC
Q 020314          241 TTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE  291 (327)
Q Consensus       241 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (327)
                      ++|+++.+|........++...+.++++++.+ +....+++++++++++++
T Consensus        81 ~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   81 PGGRIVVVGVYGGDPISFNLMNLMFKEITIRG-SWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             EEEEEEEESSTSTSEEEEEHHHHHHTTEEEEE-ESSGGHHHHHHHHHHHH-
T ss_pred             cCCEEEEEEccCCCCCCCCHHHHHhCCcEEEE-EccCCHHHHHHHHHHhcC
Confidence            99999999987755566677888899999998 445568899999988864

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.58  E-value=4.6e-15  Score=112.56  Aligned_cols=120  Identities=32%  Similarity=0.406  Sum_probs=80.0

Q ss_pred             cCCCEEEeCCCCCcccccCCCCCcccEEEeCCC--CCcc-cccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEE
Q 020314          196 LGADEVLDYKTPDGAALKSPSGRKYDAVINCVT--GIPW-STFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVP  272 (327)
Q Consensus       196 lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  272 (327)
                      ||++.++|++..+.     +..+++|+|||++|  ++.+ ..+.++| ++|+++.++. .........   .....+...
T Consensus         1 LGAd~vidy~~~~~-----~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~~~~~~~~~---~~~~~~~~~   70 (127)
T PF13602_consen    1 LGADEVIDYRDTDF-----AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-DLPSFARRL---KGRSIRYSF   70 (127)
T ss_dssp             CT-SEEEETTCSHH-----HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-HHHHHHHHH---HCHHCEEEC
T ss_pred             CCcCEEecCCCccc-----cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-cccchhhhh---cccceEEEE
Confidence            69999999985444     44678999999999  5554 7888899 9999999985 111111101   111222222


Q ss_pred             EEe-CC---CHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          273 FSV-SP---KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       273 ~~~-~~---~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      +.. ..   ..+.++.+.+++.+|+|++.+.++||++++++|++.+++++..||+||
T Consensus        71 ~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   71 LFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             CC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             EEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            221 11   345699999999999999999999999999999999999999999996

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.35  E-value=6.7e-12  Score=111.99  Aligned_cols=173  Identities=12%  Similarity=0.038  Sum_probs=126.2

Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCCcccccC
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      .+.++.+..++.    .+|++|+|.| .|.+|+.+++.++.+|++|+++. ++.|.+.++.+|++.+ +..    +..  
T Consensus       188 ~~~~i~r~t~~~----l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~~~----e~v--  255 (413)
T cd00401         188 LIDGIKRATDVM----IAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-TME----EAV--  255 (413)
T ss_pred             hHHHHHHhcCCC----CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-cHH----HHH--
Confidence            345555554442    5899999999 89999999999999999998877 4578888889998533 211    111  


Q ss_pred             CCCCcccEEEeCCCCCc-cccc-ccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHH--HHHHHHH
Q 020314          215 PSGRKYDAVINCVTGIP-WSTF-EPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLD--FLVKLVK  290 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  290 (327)
                         .++|+||+|+|.+. +... ++.++++|+++.+|...   ..+....+..+.+++.+.........++  ..+++++
T Consensus       256 ---~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~---~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa  329 (413)
T cd00401         256 ---KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFD---VEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLA  329 (413)
T ss_pred             ---cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCC---CccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhh
Confidence               35799999999766 6655 89999999999999652   3344555566676676643322222455  7899999


Q ss_pred             CCce---eEeccee-----eccc-cHHHHHHHHhcCCCC-ccEEEe
Q 020314          291 EGKL---KTVIDSK-----HSLS-KAEDAWAKSISGRAT-GKIIVE  326 (327)
Q Consensus       291 ~g~l---~~~~~~~-----~~~~-~~~~a~~~~~~~~~~-gkvvv~  326 (327)
                      +|++   .+.+++.     ++|+ |+.+++..+.+++.. -|+++.
T Consensus       330 ~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~  375 (413)
T cd00401         330 EGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFL  375 (413)
T ss_pred             CcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence            9987   5677777     8999 999999999876542 466654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.26  E-value=4.8e-11  Score=109.21  Aligned_cols=144  Identities=17%  Similarity=0.165  Sum_probs=102.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEE-EeCCCCCc--c--cccCC---------
Q 020314          151 SGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEV-LDYKTPDG--A--ALKSP---------  215 (327)
Q Consensus       151 ~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v-~~~~~~~~--~--~~~~~---------  215 (327)
                      ..++++|+|.| +|++|+++++.|+.+|++|++++ ++++++.++++|++.+ ++..+.+.  .  ..+.+         
T Consensus       162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            46899999999 79999999999999999999888 5689999999999854 55433210  0  00111         


Q ss_pred             --C--CCcccEEEeCCCCC------c-ccccccccCCCcEEEeecCCchh--HHHHhhhhccc-cceeeEEEEeCCCHHH
Q 020314          216 --S--GRKYDAVINCVTGI------P-WSTFEPNLGTTGKVIDFNPSPRV--LLTFAWKKLTF-SKKQLVPFSVSPKGEN  281 (327)
Q Consensus       216 --~--~~~~d~v~d~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~  281 (327)
                        .  .+++|++|+|++.+      . .+.+++.++++|++++++...+.  ........+.. +++++.+.+..+ .+.
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P-~~~  319 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP-SRL  319 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc-hhH
Confidence              1  14799999999953      2 38899999999999999875332  22333344454 778888755333 344


Q ss_pred             HHHHHHHHHCCceeE
Q 020314          282 LDFLVKLVKEGKLKT  296 (327)
Q Consensus       282 ~~~~~~~~~~g~l~~  296 (327)
                      .+...+++.++.++.
T Consensus       320 p~~As~lla~~~i~l  334 (509)
T PRK09424        320 PTQSSQLYGTNLVNL  334 (509)
T ss_pred             HHHHHHHHHhCCccH
Confidence            446888888887653

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.19  E-value=3.7e-06  Score=72.37  Aligned_cols=164  Identities=15%  Similarity=0.099  Sum_probs=90.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEec-CCcHHHHHh----cCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT--HVTATCG-ARNIELVKS----LGADEVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~-~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      +++++||..| +|. |..+.++++..|.  +|++++. ++.++.+++    ++.+.+. ....+...+. ...+.||+|+
T Consensus        76 ~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d~~~l~-~~~~~fD~Vi  151 (272)
T PRK11873         76 KPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGEIEALP-VADNSVDVII  151 (272)
T ss_pred             CCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcchhhCC-CCCCceeEEE
Confidence            8999999999 566 8888888887764  6888884 455555543    4443221 1111111111 1234799998


Q ss_pred             eCCC-----C--CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHC-Cc--e
Q 020314          225 NCVT-----G--IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE-GK--L  294 (327)
Q Consensus       225 d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~--l  294 (327)
                      .+..     +  ..+..+.+.|+++|+++..+..........    ..+...+..... ......+++.+++++ |-  +
T Consensus       152 ~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~e~~~~l~~aGf~~v  226 (272)
T PRK11873        152 SNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGELPEE----IRNDAELYAGCV-AGALQEEEYLAMLAEAGFVDI  226 (272)
T ss_pred             EcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCCCHH----HHHhHHHHhccc-cCCCCHHHHHHHHHHCCCCce
Confidence            5432     1  237788899999999988653221111000    001111111000 011123344555555 32  3


Q ss_pred             eEecceeeccccHHHHHHHH--hcCCCCccEE
Q 020314          295 KTVIDSKHSLSKAEDAWAKS--ISGRATGKII  324 (327)
Q Consensus       295 ~~~~~~~~~~~~~~~a~~~~--~~~~~~gkvv  324 (327)
                      .......+++++..++++.+  ..+...++.+
T Consensus       227 ~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        227 TIQPKREYRIPDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             EEEeccceecccHHHHHHHhccccccccCceE
Confidence            34455678899999999998  5555555554

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.17  E-value=6e-05  Score=64.75  Aligned_cols=167  Identities=16%  Similarity=0.159  Sum_probs=103.3

Q ss_pred             eeecccceEEEEecCCCCCCCCCCCEEEEEcc---------------------------CcccceeEeecCCceeeCCCC
Q 020314           68 FIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---------------------------GGGLAEFAVAKESLTVARPQE  120 (327)
Q Consensus        68 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~---------------------------~g~~a~~~~~~~~~~~~ip~~  120 (327)
                      .+|--.+ ++|++  |++.++.+|.||+++..                           .-.|.+|.++..+..+.    
T Consensus        32 ~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~----  104 (314)
T PF11017_consen   32 IVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD----  104 (314)
T ss_pred             ccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC----
Confidence            4454455 68888  89999999999999771                           11233333333222221    


Q ss_pred             CChhh-hcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHH-hC-CCeEEEEecCCcHHHHHhcC
Q 020314          121 VSAAE-GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LG-NTHVTATCGARNIELVKSLG  197 (327)
Q Consensus       121 ~~~~~-aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~-~~-g~~v~~~~~~~~~~~~~~lg  197 (327)
                      -+.+. -+++-..+.|.|. |.+...-.  +.-..+.|+|..|++-+++.++.+++ .. +.+++++++....+..+++|
T Consensus       105 ~~~e~~~~LlrPLf~Tsfl-l~d~l~~~--~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~Fve~lg  181 (314)
T PF11017_consen  105 PEREDWQMLLRPLFITSFL-LDDFLFDN--DFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVAFVESLG  181 (314)
T ss_pred             cchhHHHHHHHHHHHHHHH-HHHHhccc--ccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchhhhhccC
Confidence            01222 3444445566663 33332211  11456789999999999999998888 44 45999999998888999999


Q ss_pred             C-CEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCc-EEEeec
Q 020314          198 A-DEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTG-KVIDFN  249 (327)
Q Consensus       198 ~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G-~~v~~g  249 (327)
                      + |.++.|++.+.     .....--+++|..|+.. ....-++++..= ..+.+|
T Consensus       182 ~Yd~V~~Yd~i~~-----l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG  231 (314)
T PF11017_consen  182 CYDEVLTYDDIDS-----LDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVG  231 (314)
T ss_pred             CceEEeehhhhhh-----ccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEE
Confidence            7 67887766431     11133468899999866 444445554432 344555

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.11  E-value=5.6e-06  Score=76.14  Aligned_cols=101  Identities=19%  Similarity=0.217  Sum_probs=74.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEE-eCCCCC------c---------ccccC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVL-DYKTPD------G---------AALKS  214 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~-~~~~~~------~---------~~~~~  214 (327)
                      .++.+|+|.| .|.+|++++++++.+|++|++.+ +.++++.++.+|++.+. +..+..      .         ...+.
T Consensus       162 vp~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            4678999999 79999999999999999988887 45788899999988643 221100      0         00000


Q ss_pred             C--CCCcccEEEeCC---CC--C--cccccccccCCCcEEEeecCCch
Q 020314          215 P--SGRKYDAVINCV---TG--I--PWSTFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       215 ~--~~~~~d~v~d~~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~  253 (327)
                      .  ..+++|++|+|+   |.  +  ..+..++.+++++.+|+++...+
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G  288 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG  288 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence            1  125699999999   53  2  25677899999999999975543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.02  E-value=2.7e-05  Score=67.51  Aligned_cols=94  Identities=15%  Similarity=0.245  Sum_probs=70.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      .+.+++|.| .|.+|+.+++.++.+|++|++..+. ++.+.++.+|...+ ...+. .+.+     ..+|+||++++...
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~~~l-~~~l-----~~aDiVI~t~p~~~  222 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HLSEL-AEEV-----GKIDIIFNTIPALV  222 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cHHHH-HHHh-----CCCCEEEECCChhh
Confidence            688999999 7999999999999999999988855 56677778886543 21110 1111     35899999987554


Q ss_pred             -ccccccccCCCcEEEeecCCchh
Q 020314          232 -WSTFEPNLGTTGKVIDFNPSPRV  254 (327)
Q Consensus       232 -~~~~~~~l~~~G~~v~~g~~~~~  254 (327)
                       ....++.+++++.+++++..++.
T Consensus       223 i~~~~l~~~~~g~vIIDla~~pgg  246 (296)
T PRK08306        223 LTKEVLSKMPPEALIIDLASKPGG  246 (296)
T ss_pred             hhHHHHHcCCCCcEEEEEccCCCC
Confidence             45667789999999999876543

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.02  E-value=2.4e-05  Score=70.64  Aligned_cols=103  Identities=12%  Similarity=0.011  Sum_probs=74.4

Q ss_pred             HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCccccc
Q 020314          135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALK  213 (327)
Q Consensus       135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~  213 (327)
                      ..|+++.+..++.    -.|++|+|.| .|.+|..+++.++.+|++|+++..+ .+...+...|+. +.+.    .+.. 
T Consensus       197 s~~~ai~rat~~~----l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~l----~eal-  265 (425)
T PRK05476        197 SLLDGIKRATNVL----IAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMTM----EEAA-  265 (425)
T ss_pred             hhHHHHHHhccCC----CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecCH----HHHH-
Confidence            3456665443441    3899999999 7999999999999999999888744 455455555654 2211    1111 


Q ss_pred             CCCCCcccEEEeCCCCCc-cc-ccccccCCCcEEEeecCCc
Q 020314          214 SPSGRKYDAVINCVTGIP-WS-TFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~  252 (327)
                          .++|++++++|... +. ..+..+++++.++.+|...
T Consensus       266 ----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        266 ----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             ----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence                35899999999765 54 6788999999999998654

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.89  E-value=6.2e-05  Score=67.55  Aligned_cols=102  Identities=13%  Similarity=0.019  Sum_probs=73.6

Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCCcccccC
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      ++.++.+..++.    ..|++|+|.| .|.+|..+++.++.+|++|+++. ++.+...+...|+. +.+.    .+..  
T Consensus       181 ~~~~i~r~t~~~----l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~l----eeal--  248 (406)
T TIGR00936       181 TIDGILRATNLL----IAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMTM----EEAA--  248 (406)
T ss_pred             HHHHHHHhcCCC----CCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCCH----HHHH--
Confidence            344554443331    5899999999 89999999999999999999887 44555555666653 2221    1111  


Q ss_pred             CCCCcccEEEeCCCCCc-cc-ccccccCCCcEEEeecCCc
Q 020314          215 PSGRKYDAVINCVTGIP-WS-TFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~  252 (327)
                         .+.|++|+++|... +. ..+..+++++.++.+|...
T Consensus       249 ---~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       249 ---KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             ---hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence               34799999999766 54 4888999999999998654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02494 adenosylhomocysteinase

Probab=97.70  E-value=0.00015  Score=65.80  Aligned_cols=100  Identities=14%  Similarity=0.035  Sum_probs=74.5

Q ss_pred             HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCC
Q 020314          137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSP  215 (327)
Q Consensus       137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~  215 (327)
                      +.++.+..++.    -.|++|+|.| .|.+|..+++.++.+|++|+++..+ .+...+...|... ++.    .+.+   
T Consensus       241 ~d~i~r~t~i~----LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~v-v~l----eEal---  307 (477)
T PLN02494        241 PDGLMRATDVM----IAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQV-LTL----EDVV---  307 (477)
T ss_pred             HHHHHHhcCCc----cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCee-ccH----HHHH---
Confidence            55665554442    4799999999 8999999999999999999888754 4555566666642 211    1112   


Q ss_pred             CCCcccEEEeCCCCCc--ccccccccCCCcEEEeecCC
Q 020314          216 SGRKYDAVINCVTGIP--WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       216 ~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~  251 (327)
                        ...|++++++|...  ....++.+++++.++.+|..
T Consensus       308 --~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        308 --SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             --hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence              24799999999765  37899999999999999974

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.67  E-value=0.00022  Score=67.98  Aligned_cols=94  Identities=18%  Similarity=0.170  Sum_probs=64.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC----------------------CcHHHHHhcCCCEEEeCCC-CC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA----------------------RNIELVKSLGADEVLDYKT-PD  208 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~----------------------~~~~~~~~lg~~~v~~~~~-~~  208 (327)
                      ++|++|+|.| +|++|+++++.++..|++|+++...                      .+++.++++|.+..++... .+
T Consensus       135 ~~g~~V~VIG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~  213 (564)
T PRK12771        135 DTGKRVAVIG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGED  213 (564)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCc
Confidence            6899999999 7999999999999999998887631                      2345677899877665432 22


Q ss_pred             cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEee
Q 020314          209 GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       209 ~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~  248 (327)
                      ... ... ..++|++|+++|... ....+......|.+..+
T Consensus       214 ~~~-~~~-~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~  252 (564)
T PRK12771        214 ITL-EQL-EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV  252 (564)
T ss_pred             CCH-HHH-HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence            111 111 135999999999754 44455555555555433

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.58  E-value=0.00081  Score=54.28  Aligned_cols=112  Identities=20%  Similarity=0.206  Sum_probs=76.2

Q ss_pred             hhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc-----HHHHHhcCCC
Q 020314          125 EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN-----IELVKSLGAD  199 (327)
Q Consensus       125 ~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~-----~~~~~~lg~~  199 (327)
                      ..-.+..+.+.|. .+ +...+     +++++||-.|  +|.|+.++-+++..| +|+.+.+.+.     ++.++.+|..
T Consensus        51 ~gqtis~P~~vA~-m~-~~L~~-----~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~  120 (209)
T COG2518          51 CGQTISAPHMVAR-ML-QLLEL-----KPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYE  120 (209)
T ss_pred             CCceecCcHHHHH-HH-HHhCC-----CCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCC
Confidence            3344444444444 22 55666     8999999998  578999999999888 9998886432     3456788886


Q ss_pred             EEEeCCCCCcccccCCCCCcccEEEeCCCCCcc-cccccccCCCcEEEee
Q 020314          200 EVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW-STFEPNLGTTGKVIDF  248 (327)
Q Consensus       200 ~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~  248 (327)
                      .+.....+...  .......||.|+-+.+.+.+ ...++.|+++|+++.-
T Consensus       121 nV~v~~gDG~~--G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P  168 (209)
T COG2518         121 NVTVRHGDGSK--GWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP  168 (209)
T ss_pred             ceEEEECCccc--CCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence            65433332221  12233579999988876664 5778999999999764

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.52  E-value=0.0008  Score=57.08  Aligned_cols=141  Identities=18%  Similarity=0.202  Sum_probs=85.0

Q ss_pred             CCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCCh
Q 020314           86 KNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA  165 (327)
Q Consensus        86 ~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~  165 (327)
                      +.+.+||+++..+   +|.++.. +...++.+++++++-.+. .+... .....+...  .     .++++||-.| +|.
T Consensus        65 ~p~~~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~-~~l~~l~~~--~-----~~~~~VLDiG-cGs  130 (250)
T PRK00517         65 HPIRIGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTTR-LCLEALEKL--V-----LPGKTVLDVG-CGS  130 (250)
T ss_pred             CCEEEcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHHH-HHHHHHHhh--c-----CCCCEEEEeC-CcH
Confidence            3477898887754   5666644 677889999888776544 22111 122223211  2     6788999999 555


Q ss_pred             HHHHHHHHHHhCCC-eEEEEec-CCcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc----cccc
Q 020314          166 VGLYAVQLAKLGNT-HVTATCG-ARNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP----WSTF  235 (327)
Q Consensus       166 ~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~~  235 (327)
                       |..++.+++ .|+ +|++++. +...+.++    ..+....+.       ..  .+...||+|+.+...+.    +..+
T Consensus       131 -G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~-------~~--~~~~~fD~Vvani~~~~~~~l~~~~  199 (250)
T PRK00517        131 -GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVY-------LP--QGDLKADVIVANILANPLLELAPDL  199 (250)
T ss_pred             -HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEE-------Ec--cCCCCcCEEEEcCcHHHHHHHHHHH
Confidence             877776555 566 6998884 44444443    222210010       00  11115999997765432    4567


Q ss_pred             ccccCCCcEEEeecCC
Q 020314          236 EPNLGTTGKVIDFNPS  251 (327)
Q Consensus       236 ~~~l~~~G~~v~~g~~  251 (327)
                      .+.|+++|+++..|..
T Consensus       200 ~~~LkpgG~lilsgi~  215 (250)
T PRK00517        200 ARLLKPGGRLILSGIL  215 (250)
T ss_pred             HHhcCCCcEEEEEECc
Confidence            7889999999987644

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.47  E-value=0.00093  Score=60.95  Aligned_cols=101  Identities=11%  Similarity=0.010  Sum_probs=72.1

Q ss_pred             HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCC
Q 020314          137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSP  215 (327)
Q Consensus       137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~  215 (327)
                      +.++.+..+..    -.|++|+|.| .|.+|..+++.++.+|++|+++.+. .+...+...|+.. .+.    .+..   
T Consensus       241 ~d~~~R~~~~~----LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~-~~l----eell---  307 (476)
T PTZ00075        241 IDGIFRATDVM----IAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQV-VTL----EDVV---  307 (476)
T ss_pred             HHHHHHhcCCC----cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCcee-ccH----HHHH---
Confidence            35554554442    4899999999 7999999999999999998887644 3433344455432 111    1111   


Q ss_pred             CCCcccEEEeCCCCCc-cc-ccccccCCCcEEEeecCCc
Q 020314          216 SGRKYDAVINCVTGIP-WS-TFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       216 ~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~  252 (327)
                        +..|+|+.++|... +. ..++.+++++.++.+|...
T Consensus       308 --~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        308 --ETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             --hcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence              35899999998655 54 7899999999999998764

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.34  E-value=0.00079  Score=60.40  Aligned_cols=97  Identities=14%  Similarity=0.167  Sum_probs=63.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC--
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT--  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g--  228 (327)
                      ++.+|+|.| +|.+|+.+++.++.+|++|+++++. ++.+.+ ..++........+.. ...+..  ..+|++|+|++  
T Consensus       166 ~~~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~-~l~~~l--~~aDvVI~a~~~~  241 (370)
T TIGR00518       166 EPGDVTIIG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAY-EIEDAV--KRADLLIGAVLIP  241 (370)
T ss_pred             CCceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHH-HHHHHH--ccCCEEEEccccC
Confidence            455699998 6999999999999999998888754 555544 455543222221111 111111  35899999983  


Q ss_pred             -C--Cc--ccccccccCCCcEEEeecCCch
Q 020314          229 -G--IP--WSTFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       229 -~--~~--~~~~~~~l~~~G~~v~~g~~~~  253 (327)
                       .  +.  ....++.+++++.+++++...+
T Consensus       242 g~~~p~lit~~~l~~mk~g~vIvDva~d~G  271 (370)
T TIGR00518       242 GAKAPKLVSNSLVAQMKPGAVIVDVAIDQG  271 (370)
T ss_pred             CCCCCcCcCHHHHhcCCCCCEEEEEecCCC
Confidence             2  22  3567778999999999875443

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.30  E-value=0.00066  Score=55.88  Aligned_cols=77  Identities=25%  Similarity=0.282  Sum_probs=53.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC----EEEeCCCCC--ccccc-CC-CCCcccE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD----EVLDYKTPD--GAALK-SP-SGRKYDA  222 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~----~v~~~~~~~--~~~~~-~~-~~~~~d~  222 (327)
                      +++.++|+||++|+|.+.++.+...|++|+.+.|. ++++ ++.+++..    ..+|-.+..  .+.++ .. .-+.+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            55789999999999999999999999999999965 6776 45678731    223433332  11111 11 1135999


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      .+|+.|-
T Consensus        85 LvNNAGl   91 (246)
T COG4221          85 LVNNAGL   91 (246)
T ss_pred             EEecCCC
Confidence            9999984

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.29  E-value=0.00047  Score=58.14  Aligned_cols=78  Identities=23%  Similarity=0.266  Sum_probs=53.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-----EEE--eCCCCC--cccccC--CCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-----EVL--DYKTPD--GAALKS--PSGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-----~v~--~~~~~~--~~~~~~--~~~~  218 (327)
                      ..+.+++|+||++|+|...+..+...|++++.+.|+ +|++ +++++.-.     .++  |..+.+  ..+...  ..+.
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            578899999999999999999999999999999976 5654 33333321     132  333333  122221  2334


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      .+|+.+|+.|-
T Consensus        84 ~IdvLVNNAG~   94 (265)
T COG0300          84 PIDVLVNNAGF   94 (265)
T ss_pred             cccEEEECCCc
Confidence            79999999983

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.26  E-value=0.0014  Score=56.61  Aligned_cols=94  Identities=14%  Similarity=0.210  Sum_probs=65.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      .+++++|.| .|.+|.++++.++.+|++|++..++ ++.+.+...|...+ ...+. .+..     ..+|+|+++++...
T Consensus       150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~~~~l-~~~l-----~~aDiVint~P~~i  221 (287)
T TIGR02853       150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-PLNKL-EEKV-----AEIDIVINTIPALV  221 (287)
T ss_pred             CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-cHHHH-HHHh-----ccCCEEEECCChHH
Confidence            678999999 7999999999999999999888765 44555555554322 11110 1111     35899999997554


Q ss_pred             -ccccccccCCCcEEEeecCCchh
Q 020314          232 -WSTFEPNLGTTGKVIDFNPSPRV  254 (327)
Q Consensus       232 -~~~~~~~l~~~G~~v~~g~~~~~  254 (327)
                       -...++.++++..+++++..++.
T Consensus       222 i~~~~l~~~k~~aliIDlas~Pg~  245 (287)
T TIGR02853       222 LTADVLSKLPKHAVIIDLASKPGG  245 (287)
T ss_pred             hCHHHHhcCCCCeEEEEeCcCCCC
Confidence             23566778888888998876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.25  E-value=0.0019  Score=49.08  Aligned_cols=92  Identities=20%  Similarity=0.196  Sum_probs=58.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcH-HHHHhcCCC--EEEeCCCCCcccccCCCCCcccEEEeCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNI-ELVKSLGAD--EVLDYKTPDGAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~-~~~~~lg~~--~v~~~~~~~~~~~~~~~~~~~d~v~d~~  227 (327)
                      ++.+++|.| +|++|.+++..+...|++ ++.+.|+ +|. ++++.++..  .++..++.. ...     ..+|+|++|+
T Consensus        11 ~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~-~~~-----~~~DivI~aT   83 (135)
T PF01488_consen   11 KGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLE-EAL-----QEADIVINAT   83 (135)
T ss_dssp             TTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHC-HHH-----HTESEEEE-S
T ss_pred             CCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHH-HHH-----hhCCeEEEec
Confidence            788999999 699999999999999995 7776666 443 355666433  233333221 111     3589999999


Q ss_pred             CCCcccccccccCCC----cEEEeecCC
Q 020314          228 TGIPWSTFEPNLGTT----GKVIDFNPS  251 (327)
Q Consensus       228 g~~~~~~~~~~l~~~----G~~v~~g~~  251 (327)
                      +..........+...    +-+++++.+
T Consensus        84 ~~~~~~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   84 PSGMPIITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             STTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred             CCCCcccCHHHHHHHHhhhhceeccccC
Confidence            866533222333333    577788754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08324 short chain dehydrogenase; Validated

Probab=97.00  E-value=0.00084  Score=65.45  Aligned_cols=112  Identities=15%  Similarity=0.051  Sum_probs=66.8

Q ss_pred             cccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe
Q 020314          101 GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH  180 (327)
Q Consensus       101 g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~  180 (327)
                      -++++|..+++..++.+ +..+.+++...            +....   ...+++++||+||+|++|.++++.+...|++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~------------~~~~~---~~l~gk~vLVTGasggIG~~la~~L~~~Ga~  448 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQ------------RMPKP---KPLAGKVALVTGAAGGIGKATAKRLAAEGAC  448 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhh------------cCCCC---cCCCCCEEEEecCCCHHHHHHHHHHHHCcCE
Confidence            35666776776666666 45555555321            11011   1147889999999999999999999999999


Q ss_pred             EEEEecC-CcHH-HHHhcCC--C-EE--EeCCCCC--cccccC--CCCCcccEEEeCCC
Q 020314          181 VTATCGA-RNIE-LVKSLGA--D-EV--LDYKTPD--GAALKS--PSGRKYDAVINCVT  228 (327)
Q Consensus       181 v~~~~~~-~~~~-~~~~lg~--~-~v--~~~~~~~--~~~~~~--~~~~~~d~v~d~~g  228 (327)
                      |+.++++ ++.+ ..+.++.  . ..  .|-.+.+  ...++.  ...+++|++|++.|
T Consensus       449 Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        449 VVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             EEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            9988865 3433 2334443  1 11  2222222  111111  11236999999998

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.00  E-value=0.0023  Score=53.59  Aligned_cols=35  Identities=17%  Similarity=0.192  Sum_probs=32.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++|+|+|++|++|..+++.+...|++|+.++++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~   38 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRN   38 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            56789999999999999999999999999999865

>PRK12742 oxidoreductase; Provisional

Probab=96.98  E-value=0.0026  Score=53.30  Aligned_cols=75  Identities=20%  Similarity=0.206  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHH-HHHhcCCCEE-EeCCCCC--cccccCCCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIE-LVKSLGADEV-LDYKTPD--GAALKSPSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~-~~~~lg~~~v-~~~~~~~--~~~~~~~~~~~~d~v~d~  226 (327)
                      +++++||+||+|++|..+++.+...|++|+.+.+.  ++.+ +..+++...+ .|..+..  .+..+.  .+++|+++++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~li~~   82 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRK--SGALDILVVN   82 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHH--hCCCcEEEEC
Confidence            57889999999999999999999899998877542  2332 3344554332 2222211  112221  1358999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        83 ag~   85 (237)
T PRK12742         83 AGI   85 (237)
T ss_pred             CCC
Confidence            874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=96.91  E-value=0.0025  Score=50.97  Aligned_cols=77  Identities=18%  Similarity=0.134  Sum_probs=52.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCC---EEEeCCCCC--cccccC--CCCCcccEEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGAD---EVLDYKTPD--GAALKS--PSGRKYDAVI  224 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~---~v~~~~~~~--~~~~~~--~~~~~~d~v~  224 (327)
                      .|.+|||+||++|+|++.++-...+|-+|+..-+. ++++.++..-.+   .+.|-.+.+  .+..++  ..-...++++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            57889999999999999999999999999988765 677777644432   233333322  111111  1223479999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      +|.|-
T Consensus        84 NNAGI   88 (245)
T COG3967          84 NNAGI   88 (245)
T ss_pred             ecccc
Confidence            99984

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.90  E-value=0.0014  Score=57.44  Aligned_cols=109  Identities=17%  Similarity=0.204  Sum_probs=72.0

Q ss_pred             ceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-Cc-
Q 020314          113 LTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RN-  189 (327)
Q Consensus       113 ~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~-  189 (327)
                      ..+++|+.+..+.+.... +.+.++.++...... .+. -++.+|+|.| +|.+|..+++.++..|+ +|+++.++ ++ 
T Consensus       140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~-~~~-l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra  215 (311)
T cd05213         140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKI-FGN-LKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERA  215 (311)
T ss_pred             HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHH-hCC-ccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            567788888888776664 345677776433221 110 2688999999 69999999999998876 66666655 44 


Q ss_pred             HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcc
Q 020314          190 IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW  232 (327)
Q Consensus       190 ~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~  232 (327)
                      .++++++|.. +++.++. .+..     ..+|+||.|++.+..
T Consensus       216 ~~la~~~g~~-~~~~~~~-~~~l-----~~aDvVi~at~~~~~  251 (311)
T cd05213         216 EELAKELGGN-AVPLDEL-LELL-----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHHHcCCe-EEeHHHH-HHHH-----hcCCEEEECCCCCch
Confidence            4677888874 3332211 1111     247999999997654

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.0041  Score=53.59  Aligned_cols=77  Identities=29%  Similarity=0.472  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCC--cccccC---CCCCcccEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEV-LDYKTPD--GAALKS---PSGRKYDAVIN  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~--~~~~~~---~~~~~~d~v~d  225 (327)
                      .+++++|+||+|++|.+.++.+...|++|++++++ ++.+.+...+...+ .|..+..  ....+.   ..++.+|++++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~   82 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN   82 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence            45689999999999999998888889999998865 45554444444322 2333222  111111   11246899999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      +.|.
T Consensus        83 ~Ag~   86 (277)
T PRK05993         83 NGAY   86 (277)
T ss_pred             CCCc
Confidence            9873

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.74  E-value=0.017  Score=44.91  Aligned_cols=103  Identities=13%  Similarity=0.045  Sum_probs=65.1

Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccC
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      .+.++.+..++.    -.|++++|.| =|-+|.-.++.++.+|++|+++.. +.+.-.+..-|.. +...    .+..  
T Consensus         9 ~~d~i~r~t~~~----l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~-v~~~----~~a~--   76 (162)
T PF00670_consen    9 LVDGIMRATNLM----LAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFE-VMTL----EEAL--   76 (162)
T ss_dssp             HHHHHHHHH-S------TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-E-EE-H----HHHT--
T ss_pred             HHHHHHhcCcee----eCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcE-ecCH----HHHH--
Confidence            344555555553    5899999999 899999999999999999999984 4444344444443 2211    1111  


Q ss_pred             CCCCcccEEEeCCCCCc-c-cccccccCCCcEEEeecCCch
Q 020314          215 PSGRKYDAVINCVTGIP-W-STFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~-~~~~~~l~~~G~~v~~g~~~~  253 (327)
                         ...|+++.++|... + ..-++.|+++..+..+|....
T Consensus        77 ---~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~  114 (162)
T PF00670_consen   77 ---RDADIFVTATGNKDVITGEHFRQMKDGAILANAGHFDV  114 (162)
T ss_dssp             ---TT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred             ---hhCCEEEECCCCccccCHHHHHHhcCCeEEeccCcCce
Confidence               34799999999866 3 477889999999998887654

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.0071  Score=51.14  Aligned_cols=73  Identities=23%  Similarity=0.180  Sum_probs=46.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHHHHHhcCCCEEE--eCCCCCcccccCCCCCcccEEEeCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIELVKSLGADEVL--DYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~~~~~lg~~~v~--~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .+++++|+||+|++|.+.++.+...|++|+.+.+..  +.+.... +....+  |-.+.+ ......  +.+|+++++.|
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~-~~~~~~--~~iDilVnnAG   88 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEE-SLDKQL--ASLDVLILNHG   88 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHH-HHHHhc--CCCCEEEECCc
Confidence            567899999999999999998888999999888543  2221111 111222  222211 111112  35999999998


Q ss_pred             C
Q 020314          229 G  229 (327)
Q Consensus       229 ~  229 (327)
                      .
T Consensus        89 ~   89 (245)
T PRK12367         89 I   89 (245)
T ss_pred             c
Confidence            4

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.0042  Score=53.36  Aligned_cols=75  Identities=23%  Similarity=0.208  Sum_probs=48.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCC--cccccCC--CCCcccEEEeCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEV-LDYKTPD--GAALKSP--SGRKYDAVINCVT  228 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~--~~~~~~~--~~~~~d~v~d~~g  228 (327)
                      +++||+||+|++|...++.+...|++|+++++. ++.+.+...+...+ .|..+.+  .+..+..  ..+++|+++++.|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   81 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG   81 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            469999999999999999988899999998865 44444444444322 3433322  1111111  1246899999998


Q ss_pred             C
Q 020314          229 G  229 (327)
Q Consensus       229 ~  229 (327)
                      .
T Consensus        82 ~   82 (274)
T PRK05693         82 Y   82 (274)
T ss_pred             C
Confidence            4

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.0097  Score=49.47  Aligned_cols=75  Identities=23%  Similarity=0.244  Sum_probs=48.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEE--eCCCCC--cccccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVL--DYKTPD--GAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~--~~~~~~--~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      ++++|+|++|++|...++.+...|++|++++++ ++.+.++.++....+  |-.+.+  .+..+....+++|+++.+.|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~   81 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI   81 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence            469999999999999888888889999998864 444444444322222  222221  122232333479999998874

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.52  E-value=0.017  Score=47.25  Aligned_cols=92  Identities=11%  Similarity=-0.025  Sum_probs=55.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      .+.+|||.| +|.+|...++.+...|++|+++....  ....+..-+.-. ..........     =.++|+||-+++++
T Consensus         9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~-~~~~~~~~~~-----l~~adlViaaT~d~   81 (202)
T PRK06718          9 SNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIR-WKQKEFEPSD-----IVDAFLVIAATNDP   81 (202)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEE-EEecCCChhh-----cCCceEEEEcCCCH
Confidence            678999999 69999998888888899988876432  222111112111 1111111111     14589999999988


Q ss_pred             cccccccccCCCcEEEeecCC
Q 020314          231 PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .++..+...+..+.++.....
T Consensus        82 elN~~i~~~a~~~~lvn~~d~  102 (202)
T PRK06718         82 RVNEQVKEDLPENALFNVITD  102 (202)
T ss_pred             HHHHHHHHHHHhCCcEEECCC
Confidence            766555544444566665543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.46  E-value=0.0097  Score=54.58  Aligned_cols=145  Identities=14%  Similarity=0.162  Sum_probs=89.5

Q ss_pred             eeecccceEEEEecCCCCCCCCCCCEEEEEc-----------------cCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314           68 FIPASDVAGEVIGLGSEVKNFKVGDKVVAVL-----------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP  130 (327)
Q Consensus        68 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-----------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~  130 (327)
                      ..-|+|+++-+.+|+++.+..-+|+.=+..-                 .++.|++        .+++|+.+..+.+ ...
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~--------a~~~~k~v~~~t~-i~~  160 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQK--------AFSVAKRVRTETG-IGA  160 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHhhHhhhcC-CCC
Confidence            3569999999999999988766666633111                 1122222        2445554444333 233


Q ss_pred             chHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-Cc-HHHHHhcCCCEEEeCCCC
Q 020314          131 CAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RN-IELVKSLGADEVLDYKTP  207 (327)
Q Consensus       131 ~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~-~~~~~~lg~~~v~~~~~~  207 (327)
                      .+..+++.++...... ++ ..++.+|+|.| +|.+|.++++.++..|+ +++++.++ ++ .++++.+|.+ +++..+.
T Consensus       161 ~~~Sv~~~Av~~a~~~-~~-~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~~~  236 (423)
T PRK00045        161 GAVSVASAAVELAKQI-FG-DLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLDEL  236 (423)
T ss_pred             CCcCHHHHHHHHHHHh-hC-CccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHHHH
Confidence            3445667777433221 00 14778999999 79999999999999998 67777655 44 3466777754 3332111


Q ss_pred             CcccccCCCCCcccEEEeCCCCCc
Q 020314          208 DGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                       ....     .++|+||+|++.+.
T Consensus       237 -~~~l-----~~aDvVI~aT~s~~  254 (423)
T PRK00045        237 -PEAL-----AEADIVISSTGAPH  254 (423)
T ss_pred             -HHHh-----ccCCEEEECCCCCC
Confidence             1111     35899999999654

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.46  E-value=0.025  Score=44.19  Aligned_cols=90  Identities=11%  Similarity=0.048  Sum_probs=55.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW  232 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~  232 (327)
                      .|.+|+|.| .|.+|.--++.+...|++|+++. ++..+.+..++.-. .....     .+..+=.++|+|+-+++++..
T Consensus        12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIs-p~~~~~l~~l~~i~-~~~~~-----~~~~dl~~a~lViaaT~d~e~   83 (157)
T PRK06719         12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVS-PEICKEMKELPYIT-WKQKT-----FSNDDIKDAHLIYAATNQHAV   83 (157)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEc-CccCHHHHhccCcE-EEecc-----cChhcCCCceEEEECCCCHHH
Confidence            688999999 69999988888888899998774 33333333444211 11111     111112458999999988776


Q ss_pred             cccccccCCCcEEEeecC
Q 020314          233 STFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       233 ~~~~~~l~~~G~~v~~g~  250 (327)
                      +..+...+..+.++....
T Consensus        84 N~~i~~~a~~~~~vn~~d  101 (157)
T PRK06719         84 NMMVKQAAHDFQWVNVVS  101 (157)
T ss_pred             HHHHHHHHHHCCcEEECC
Confidence            655554443344554433

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.43  E-value=0.0087  Score=54.01  Aligned_cols=106  Identities=14%  Similarity=0.100  Sum_probs=67.2

Q ss_pred             hHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCCcc
Q 020314          132 AGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGA  210 (327)
Q Consensus       132 ~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~  210 (327)
                      +....+..+.+..++     +++++||-.|+  |.|..+..+++..|++|++++ +++..+.+++.....-++....+..
T Consensus       151 Aq~~k~~~l~~~l~l-----~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~  223 (383)
T PRK11705        151 AQEAKLDLICRKLQL-----KPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYR  223 (383)
T ss_pred             HHHHHHHHHHHHhCC-----CCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchh
Confidence            344555556566677     89999999993  578888899998899999998 4566666654322111111111111


Q ss_pred             cccCCCCCcccEEEeC-----CCCC----cccccccccCCCcEEEee
Q 020314          211 ALKSPSGRKYDAVINC-----VTGI----PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       211 ~~~~~~~~~~d~v~d~-----~g~~----~~~~~~~~l~~~G~~v~~  248 (327)
                         .. .+.+|.|+..     +|..    .+..+.+.|+|+|+++..
T Consensus       224 ---~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~  266 (383)
T PRK11705        224 ---DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLH  266 (383)
T ss_pred             ---hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEE
Confidence               11 2468988743     3322    256777899999999864

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.40  E-value=0.0064  Score=51.83  Aligned_cols=78  Identities=23%  Similarity=0.212  Sum_probs=50.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcH----HHHHhcCCCE-EE----eCCCCC--ccccc--CCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNI----ELVKSLGADE-VL----DYKTPD--GAALK--SPSG  217 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~----~~~~~lg~~~-v~----~~~~~~--~~~~~--~~~~  217 (327)
                      -.++.|+|+||++|+|.+.+.-.-..|++++.+++ .+++    +.+++.+... ++    |-.+.+  .+.++  ...-
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            36888999999999999988888888998888874 3444    3444555443 32    212221  11110  0122


Q ss_pred             CcccEEEeCCCC
Q 020314          218 RKYDAVINCVTG  229 (327)
Q Consensus       218 ~~~d~v~d~~g~  229 (327)
                      +++|+.+|+.|-
T Consensus        90 g~vDvLVNNAG~  101 (282)
T KOG1205|consen   90 GRVDVLVNNAGI  101 (282)
T ss_pred             CCCCEEEecCcc
Confidence            569999999983

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.0076  Score=53.38  Aligned_cols=77  Identities=19%  Similarity=0.264  Sum_probs=50.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--cccccC--CCCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--GAALKS--PSGRKY  220 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~~~~~--~~~~~~  220 (327)
                      +++++||+||++++|.+.++.+...|++|+.++++ ++++    .++..|.+.. +  |-.+.+  .+..+.  ...+++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            57889999999999999999999999999988865 3332    2334555432 2  322221  111110  111469


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |++|++.|.
T Consensus        86 D~lVnnAG~   94 (330)
T PRK06139         86 DVWVNNVGV   94 (330)
T ss_pred             CEEEECCCc
Confidence            999999984

>PRK06182 short chain dehydrogenase; Validated

Probab=96.37  E-value=0.01  Score=50.90  Aligned_cols=77  Identities=23%  Similarity=0.269  Sum_probs=49.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCC--cccccC--CCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEV-LDYKTPD--GAALKS--PSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~--~~~~~~--~~~~~~d~v~d~  226 (327)
                      ++++++|+|++|++|...++.+...|++|+++++. ++.+.+...+...+ .|-.+.+  .+..+.  ....++|+++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~   81 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN   81 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            35789999999999999999888889999998865 44443333333322 2333322  111111  112469999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        82 ag~   84 (273)
T PRK06182         82 AGY   84 (273)
T ss_pred             CCc
Confidence            984

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.32  E-value=0.012  Score=47.03  Aligned_cols=89  Identities=15%  Similarity=0.103  Sum_probs=59.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHH-HHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIEL-VKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-  229 (327)
                      -.|++|.|+| .|.+|...++.++.+|++|++..+..+... ....+..    ..+. .+.+     ...|+|+.+... 
T Consensus        34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~----~~~l-~ell-----~~aDiv~~~~plt  102 (178)
T PF02826_consen   34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE----YVSL-DELL-----AQADIVSLHLPLT  102 (178)
T ss_dssp             STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE----ESSH-HHHH-----HH-SEEEE-SSSS
T ss_pred             cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce----eeeh-hhhc-----chhhhhhhhhccc
Confidence            3789999999 899999999999999999999997655433 4444431    1111 1122     237899887763 


Q ss_pred             Cc-----ccccccccCCCcEEEeecCC
Q 020314          230 IP-----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       230 ~~-----~~~~~~~l~~~G~~v~~g~~  251 (327)
                      +.     -...++.++++..+|.++..
T Consensus       103 ~~T~~li~~~~l~~mk~ga~lvN~aRG  129 (178)
T PF02826_consen  103 PETRGLINAEFLAKMKPGAVLVNVARG  129 (178)
T ss_dssp             TTTTTSBSHHHHHTSTTTEEEEESSSG
T ss_pred             cccceeeeeeeeeccccceEEEeccch
Confidence            21     22556788888888877654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.011  Score=49.75  Aligned_cols=75  Identities=24%  Similarity=0.374  Sum_probs=49.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-EeCCCCC--cccccCCCCCcccEEEeCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-LDYKTPD--GAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~~~~~~~--~~~~~~~~~~~~d~v~d~~  227 (327)
                      ++++++|+|++|++|...++.+...|++|+.+.++ ++.+ ..+..+...+ .|..+.+  ......  ..++|++|++.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a   85 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA   85 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence            56789999999999999999999999999888865 3433 3344444322 2332221  111221  24689999999


Q ss_pred             CC
Q 020314          228 TG  229 (327)
Q Consensus       228 g~  229 (327)
                      |.
T Consensus        86 g~   87 (245)
T PRK07060         86 GI   87 (245)
T ss_pred             CC
Confidence            84

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.28  E-value=0.031  Score=45.72  Aligned_cols=92  Identities=14%  Similarity=0.161  Sum_probs=57.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      .|.+|||.| .|.+|..-++.+...|++|++++...  ....+...|.-..+. .+.....+     .++|+||-+++.+
T Consensus         8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~~~dl-----~~~~lVi~at~d~   80 (205)
T TIGR01470         8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLA-RCFDADIL-----EGAFLVIAATDDE   80 (205)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEe-CCCCHHHh-----CCcEEEEECCCCH
Confidence            577999999 79999999999999999999887542  233222333212221 11111111     3589999999877


Q ss_pred             cc-cccccccCCCcEEEeecCC
Q 020314          231 PW-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      .+ .......+..|..+.+...
T Consensus        81 ~ln~~i~~~a~~~~ilvn~~d~  102 (205)
T TIGR01470        81 ELNRRVAHAARARGVPVNVVDD  102 (205)
T ss_pred             HHHHHHHHHHHHcCCEEEECCC
Confidence            43 3444455566777765443

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.25  E-value=0.014  Score=49.40  Aligned_cols=74  Identities=20%  Similarity=0.164  Sum_probs=46.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH----HhcCCC-EE--EeCCCCCcccccCCCCCcccEEEe
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV----KSLGAD-EV--LDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~----~~lg~~-~v--~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      +.++||+||+|++|..+++.+...|++|+++++. ++.+.+    +..+.. .+  .|..+.. . .......++|++|+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~-~~~~~~~~id~vi~   79 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAI-D-RAQAAEWDVDVLLN   79 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHH-H-HHHHhcCCCCEEEE
Confidence            3579999999999999999999999999998864 222222    223322 11  2222221 1 11111237999999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      +.|.
T Consensus        80 ~ag~   83 (257)
T PRK09291         80 NAGI   83 (257)
T ss_pred             CCCc
Confidence            9873

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.25  E-value=0.0059  Score=44.53  Aligned_cols=90  Identities=16%  Similarity=0.174  Sum_probs=55.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHH-hCCCeEEEEe-cCCcHHHHHh----cCC-CEE-EeCCCCCcccccCCCCCcccEEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAK-LGNTHVTATC-GARNIELVKS----LGA-DEV-LDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~-~~g~~v~~~~-~~~~~~~~~~----lg~-~~v-~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      |+.+||-.|  .|.|..++.+++ ..++++++++ +++..+.+++    .+. +.+ +...+  . .........||+|+
T Consensus         1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d--~-~~~~~~~~~~D~v~   75 (112)
T PF12847_consen    1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGD--A-EFDPDFLEPFDLVI   75 (112)
T ss_dssp             TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC--C-HGGTTTSSCEEEEE
T ss_pred             CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc--c-ccCcccCCCCCEEE
Confidence            578899998  456888888888 5788999999 4444444431    122 222 11111  1 11222335699999


Q ss_pred             eCC-CCC-c---------ccccccccCCCcEEEe
Q 020314          225 NCV-TGI-P---------WSTFEPNLGTTGKVID  247 (327)
Q Consensus       225 d~~-g~~-~---------~~~~~~~l~~~G~~v~  247 (327)
                      ... ... .         ++.+.+.|+|+|+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence            877 321 1         4567779999999875

...

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.011  Score=50.21  Aligned_cols=77  Identities=16%  Similarity=0.099  Sum_probs=49.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-EeCCCCC--cccccCC--CCCcccEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-LDYKTPD--GAALKSP--SGRKYDAVIN  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~~~~~~~--~~~~~~~--~~~~~d~v~d  225 (327)
                      ++++|+|+||+|++|...++.+...|++|+.+++. .+.+ ....++...+ .|..+.+  ....+..  ...++|++++
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57899999999999999999998899999988865 3333 3344443222 2333322  1111110  1135899999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      +.|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            8874

>PRK08017 oxidoreductase; Provisional

Probab=96.20  E-value=0.019  Score=48.64  Aligned_cols=75  Identities=27%  Similarity=0.352  Sum_probs=49.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCC--cccc---cCCCCCcccEEEeCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEV-LDYKTPD--GAAL---KSPSGRKYDAVINCV  227 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~--~~~~---~~~~~~~~d~v~d~~  227 (327)
                      ++++|+|++|++|.++++.+...|++|+++.++ ++.+.++..+...+ .|..+.+  ....   ....+..+|.++.+.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a   82 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA   82 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            469999999999999999999889999888864 55665566665433 2332221  1111   111224688999887


Q ss_pred             CC
Q 020314          228 TG  229 (327)
Q Consensus       228 g~  229 (327)
                      |.
T Consensus        83 g~   84 (256)
T PRK08017         83 GF   84 (256)
T ss_pred             CC
Confidence            73

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.18  E-value=0.01  Score=55.01  Aligned_cols=78  Identities=18%  Similarity=0.215  Sum_probs=50.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---H-HHHHhcCCCEE-EeCCCCC--cccccCC--CCCcccE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN---I-ELVKSLGADEV-LDYKTPD--GAALKSP--SGRKYDA  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~-~~~~~lg~~~v-~~~~~~~--~~~~~~~--~~~~~d~  222 (327)
                      .+++++||+|++|++|...++.+...|++|+.+.++..   . +..++++...+ .|..+.+  .......  ...++|+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            36789999999999999999999989999998875422   2 23344554322 2333322  1111111  1136899


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      +|++.|.
T Consensus       288 vi~~AG~  294 (450)
T PRK08261        288 VVHNAGI  294 (450)
T ss_pred             EEECCCc
Confidence            9999983

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.17  E-value=0.1  Score=41.21  Aligned_cols=96  Identities=20%  Similarity=0.126  Sum_probs=58.7

Q ss_pred             cccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCCh-HHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeC
Q 020314          127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA-VGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDY  204 (327)
Q Consensus       127 a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~-~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~  204 (327)
                      ...|+....+...+.....-     -.+.+|+|.|+ |. +|..++..++..|++|+.+.+.. ++.  +          
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~-----l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~--~----------   83 (168)
T cd01080          22 GFIPCTPAGILELLKRYGID-----LAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTKNLK--E----------   83 (168)
T ss_pred             CccCChHHHHHHHHHHcCCC-----CCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCchhHH--H----------
Confidence            44455444445444333211     48899999995 65 69989999998999877666432 111  0          


Q ss_pred             CCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          205 KTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       205 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                            .+     ..+|+||.+++.+.+ .-.+.++++-.+++++.+.
T Consensus        84 ------~l-----~~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr  119 (168)
T cd01080          84 ------HT-----KQADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             ------HH-----hhCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence                  01     237888888887652 2223456666667777654

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=96.16  E-value=0.027  Score=45.92  Aligned_cols=93  Identities=18%  Similarity=0.160  Sum_probs=58.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHH----HHhcC-CCEEEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIEL----VKSLG-ADEVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~----~~~lg-~~~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      .++++|+-.| +|. |..++.+++..+  .+|++++.+ +..+.    ++.++ .+.+.....+..+..... ...+|.|
T Consensus        39 ~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~-~~~~D~V  115 (198)
T PRK00377         39 RKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTI-NEKFDRI  115 (198)
T ss_pred             CCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhc-CCCCCEE
Confidence            7899999999 555 899999888754  589999854 44443    34555 333221111111111111 2469999


Q ss_pred             EeCCCCC----cccccccccCCCcEEEe
Q 020314          224 INCVTGI----PWSTFEPNLGTTGKVID  247 (327)
Q Consensus       224 ~d~~g~~----~~~~~~~~l~~~G~~v~  247 (327)
                      |...+..    .+..+.+.|+++|+++.
T Consensus       116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        116 FIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             EECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            9865532    26677789999999875

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.13  E-value=0.092  Score=42.57  Aligned_cols=96  Identities=16%  Similarity=0.100  Sum_probs=54.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhc----CCCEE-EeCCCCCcccccCCCCCcccEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSL----GADEV-LDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~l----g~~~v-~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      ++.+++|+|++|++|...+..+...|++|+.+.+. ++.+ ..+.+    +.... .+..+. ....+..  .++|+||.
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~--~~~diVi~  103 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDD-AARAAAI--KGADVVFA  103 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCH-HHHHHHH--hcCCEEEE
Confidence            67899999999999998888888888898888755 3332 22323    22211 111111 1111111  35899999


Q ss_pred             CCCCCcc--cccccccCCCcEEEeecCC
Q 020314          226 CVTGIPW--STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       226 ~~g~~~~--~~~~~~l~~~G~~v~~g~~  251 (327)
                      +++....  .......+++-.++++..+
T Consensus       104 at~~g~~~~~~~~~~~~~~~vv~D~~~~  131 (194)
T cd01078         104 AGAAGVELLEKLAWAPKPLAVAADVNAV  131 (194)
T ss_pred             CCCCCceechhhhcccCceeEEEEccCC
Confidence            8875542  1222233332245665543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.13  E-value=0.018  Score=54.09  Aligned_cols=36  Identities=19%  Similarity=0.159  Sum_probs=33.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.|++|||+||+|++|..+++.+...|++|+++++.
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn  113 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            789999999999999999999888889999998865

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.13  E-value=0.097  Score=44.92  Aligned_cols=96  Identities=21%  Similarity=0.270  Sum_probs=65.9

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........+ +..++.    -.|++|+|.|.+..+|.-++.++...|++|+...+.. .++  +            
T Consensus       137 ~~PcTp~ai~~ll-~~~~i~----l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~--~------------  197 (286)
T PRK14175        137 FVPCTPLGIMEIL-KHADID----LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMA--S------------  197 (286)
T ss_pred             CCCCcHHHHHHHH-HHcCCC----CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH--H------------
Confidence            4565555555555 444442    4899999999777799999999999999998776432 111  0            


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                          ..     +..|++|.++|.+.+-. -+.++++..+|++|...
T Consensus       198 ----~~-----~~ADIVIsAvg~p~~i~-~~~vk~gavVIDvGi~~  233 (286)
T PRK14175        198 ----YL-----KDADVIVSAVGKPGLVT-KDVVKEGAVIIDVGNTP  233 (286)
T ss_pred             ----HH-----hhCCEEEECCCCCcccC-HHHcCCCcEEEEcCCCc
Confidence                00     34799999998775322 25678888888998654

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=96.13  E-value=0.018  Score=49.90  Aligned_cols=93  Identities=14%  Similarity=0.103  Sum_probs=55.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHH----hcCCC-EEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVK----SLGAD-EVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~----~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      +++++||-.| +|. |..++.+++ .|+ +|++++.+ ...+.++    ..+.. .+......   . .......||+|+
T Consensus       158 ~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~---~-~~~~~~~fDlVv  230 (288)
T TIGR00406       158 LKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY---L-EQPIEGKADVIV  230 (288)
T ss_pred             CCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc---c-ccccCCCceEEE
Confidence            5788999999 455 777777666 465 89999843 4333332    22221 11111110   1 111235799999


Q ss_pred             eCCCCC----cccccccccCCCcEEEeecCC
Q 020314          225 NCVTGI----PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       225 d~~g~~----~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .+....    .+..+.+.|+++|.++..|..
T Consensus       231 an~~~~~l~~ll~~~~~~LkpgG~li~sgi~  261 (288)
T TIGR00406       231 ANILAEVIKELYPQFSRLVKPGGWLILSGIL  261 (288)
T ss_pred             EecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            765433    245667899999999877654

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.12  E-value=0.025  Score=47.65  Aligned_cols=35  Identities=20%  Similarity=0.279  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|++|++|...++.+...|++|+++.+.
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~   39 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ   39 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            56789999999999999999888889999888754

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.12  E-value=0.04  Score=44.48  Aligned_cols=78  Identities=23%  Similarity=0.283  Sum_probs=51.7

Q ss_pred             CCCeEEEEcC-CChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCC-EEEeCCCCC-----cccccCCCCCcccEE
Q 020314          153 QQKNILITAA-SGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGAD-EVLDYKTPD-----GAALKSPSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~-~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~-~v~~~~~~~-----~~~~~~~~~~~~d~v  223 (327)
                      ..+.|||+|+ .||+|.+.+.-....|+.|+++++. ++.+.+ .+.|.. .-+|-+.++     .........+..|+.
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            4566888764 5889999988888899999999965 666544 366643 223333332     112222244679999


Q ss_pred             EeCCCCC
Q 020314          224 INCVTGI  230 (327)
Q Consensus       224 ~d~~g~~  230 (327)
                      +|+.|.+
T Consensus        86 ~NNAG~~   92 (289)
T KOG1209|consen   86 YNNAGQS   92 (289)
T ss_pred             EcCCCCC
Confidence            9988854

>PRK06196 oxidoreductase; Provisional

Probab=96.10  E-value=0.015  Score=51.20  Aligned_cols=77  Identities=21%  Similarity=0.262  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEE--eCCCCC--cccccC--CCCCcccEEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVL--DYKTPD--GAALKS--PSGRKYDAVI  224 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~--~~~~~~--~~~~~~--~~~~~~d~v~  224 (327)
                      .+.+++|+||+|++|.++++.+...|++|+.++++ ++.+ ....+..-..+  |-.+.+  .+....  ....++|+++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            56789999999999999998888889999998865 3332 22233211222  222221  111111  1124689999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.|.
T Consensus       105 ~nAg~  109 (315)
T PRK06196        105 NNAGV  109 (315)
T ss_pred             ECCCC
Confidence            99873

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.012  Score=51.29  Aligned_cols=77  Identities=18%  Similarity=0.157  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-EE----EeCCCCC--cccccC--CCCCccc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-EV----LDYKTPD--GAALKS--PSGRKYD  221 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-~v----~~~~~~~--~~~~~~--~~~~~~d  221 (327)
                      +++++||+||+|++|.++++.+...|++|+.+.++ ++.+ ..+.++.. .+    .|-.+.+  ....+.  ..-+.+|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            67899999999999999999999999999888865 3433 33445421 11    2322221  111111  0113589


Q ss_pred             EEEeCCCC
Q 020314          222 AVINCVTG  229 (327)
Q Consensus       222 ~v~d~~g~  229 (327)
                      +++++.|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999984

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.017  Score=50.20  Aligned_cols=35  Identities=29%  Similarity=0.274  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+||+|++|.+.++.+...|++|++++++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~   73 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARR   73 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            56789999999999999998888889999998865

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.012  Score=49.88  Aligned_cols=36  Identities=22%  Similarity=0.187  Sum_probs=32.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++++|+||+|++|..+++.+...|++|+++.++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~   42 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRR   42 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            367899999999999999999998899999988864

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.05  E-value=0.017  Score=47.42  Aligned_cols=97  Identities=18%  Similarity=0.180  Sum_probs=60.3

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCCc-----HHHHHhcCCCEEEeCCCCCcccccC
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT--HVTATCGARN-----IELVKSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~~~-----~~~~~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      +...+     ++|++||-.|  +|.|+.++-+++..|-  +|+++...+.     .+.++.++.+.+.-...+...-  .
T Consensus        66 ~~L~l-----~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g--~  136 (209)
T PF01135_consen   66 EALDL-----KPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEG--W  136 (209)
T ss_dssp             HHTTC------TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGT--T
T ss_pred             HHHhc-----CCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhc--c
Confidence            55567     8999999998  5678888888887664  6888775432     2344566665432211111111  1


Q ss_pred             CCCCcccEEEeCCCCCc-ccccccccCCCcEEEe
Q 020314          215 PSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVID  247 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~  247 (327)
                      .....||.|+-+.+-+. -...++.|+++|++|.
T Consensus       137 ~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~  170 (209)
T PF01135_consen  137 PEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVA  170 (209)
T ss_dssp             GGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEE
T ss_pred             ccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEE
Confidence            12346999998877555 4577889999999986

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.00  E-value=0.044  Score=48.10  Aligned_cols=92  Identities=20%  Similarity=0.167  Sum_probs=59.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC-CcHH----HHHhcCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT--HVTATCGA-RNIE----LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~-~~~~----~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      +++++||..| +| .|..++.+++..+.  +|++++.+ +..+    .++..|.+.+.....+..+...  ....+|+|+
T Consensus        79 ~~g~~VLDIG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~--~~~~fD~Ii  154 (322)
T PRK13943         79 DKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVP--EFAPYDVIF  154 (322)
T ss_pred             CCCCEEEEEe-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhccc--ccCCccEEE
Confidence            7889999999 44 69999999997763  68888744 3332    3345666544322221111111  114599999


Q ss_pred             eCCCCCc-ccccccccCCCcEEEe
Q 020314          225 NCVTGIP-WSTFEPNLGTTGKVID  247 (327)
Q Consensus       225 d~~g~~~-~~~~~~~l~~~G~~v~  247 (327)
                      .+.+.+. .....+.|+++|+++.
T Consensus       155 ~~~g~~~ip~~~~~~LkpgG~Lvv  178 (322)
T PRK13943        155 VTVGVDEVPETWFTQLKEGGRVIV  178 (322)
T ss_pred             ECCchHHhHHHHHHhcCCCCEEEE
Confidence            8877443 4567789999999876

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=95.99  E-value=0.33  Score=42.13  Aligned_cols=51  Identities=27%  Similarity=0.341  Sum_probs=44.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec----CCcHHHHHhcCCCEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG----ARNIELVKSLGADEVL  202 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~----~~~~~~~~~lg~~~v~  202 (327)
                      ++|.++||-.-+|.+|...+..|...|++++.+..    .+|...++.+|+.-+.
T Consensus       101 ~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~  155 (362)
T KOG1252|consen  101 TPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIIL  155 (362)
T ss_pred             cCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence            89999999999999999999999999999998873    2678888999988654

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=95.94  E-value=0.055  Score=46.53  Aligned_cols=147  Identities=16%  Similarity=0.177  Sum_probs=83.9

Q ss_pred             CCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHH
Q 020314           88 FKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG  167 (327)
Q Consensus        88 ~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G  167 (327)
                      .++|+|.+..+   +|.++..-.....+++.+++.+    ......+|++ ++...-+..    +++.+||=+|  .|.|
T Consensus       109 ~rig~~f~I~P---sw~~~~~~~~~~~i~lDPGlAF----GTG~HpTT~l-cL~~Le~~~----~~g~~vlDvG--cGSG  174 (300)
T COG2264         109 VRIGERFVIVP---SWREYPEPSDELNIELDPGLAF----GTGTHPTTSL-CLEALEKLL----KKGKTVLDVG--CGSG  174 (300)
T ss_pred             EEeeeeEEECC---CCccCCCCCCceEEEEcccccc----CCCCChhHHH-HHHHHHHhh----cCCCEEEEec--CChh
Confidence            67788877744   5555432224556666666533    3444444444 332222221    6899999998  3457


Q ss_pred             HHHHHHHHhCCC-eEEEEec-CC----cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc----cccccc
Q 020314          168 LYAVQLAKLGNT-HVTATCG-AR----NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP----WSTFEP  237 (327)
Q Consensus       168 ~~~~~la~~~g~-~v~~~~~-~~----~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~~~~  237 (327)
                      .+++..++ +|+ ++++++. +-    .++.++..+.+...  ............++.+|+|+-+.=...    ......
T Consensus       175 ILaIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~--~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~  251 (300)
T COG2264         175 ILAIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLV--QAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKR  251 (300)
T ss_pred             HHHHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhh--hcccccchhhcccCcccEEEehhhHHHHHHHHHHHHH
Confidence            77776666 566 7999984 32    23334444433210  001111122223357999998774332    556777


Q ss_pred             ccCCCcEEEeecCC
Q 020314          238 NLGTTGKVIDFNPS  251 (327)
Q Consensus       238 ~l~~~G~~v~~g~~  251 (327)
                      +++|+|++++.|-.
T Consensus       252 ~lkpgg~lIlSGIl  265 (300)
T COG2264         252 LLKPGGRLILSGIL  265 (300)
T ss_pred             HcCCCceEEEEeeh
Confidence            99999999988844

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.93  E-value=0.11  Score=44.68  Aligned_cols=78  Identities=17%  Similarity=0.148  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      -+|++|+|.|+++.+|...+.++...|++|+..-+ +..++.+.+                     +.+|++++++|.+.
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~-~t~~L~~~~---------------------~~aDIvI~AtG~~~  214 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS-RTQNLPELV---------------------KQADIIVGAVGKPE  214 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC-CchhHHHHh---------------------ccCCEEEEccCCCC
Confidence            48889999996555999999999999996654443 211222211                     34899999998555


Q ss_pred             ccccccccCCCcEEEeecCCc
Q 020314          232 WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       232 ~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      + .-.+.++++..++++|...
T Consensus       215 ~-v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        215 L-IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             c-CCHHHcCCCCEEEEEEEee
Confidence            2 2235688888888888553

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=95.88  E-value=0.095  Score=43.21  Aligned_cols=96  Identities=18%  Similarity=0.140  Sum_probs=59.8

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHH----HHHhcCCCEE--EeCCCCCcccc
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIE----LVKSLGADEV--LDYKTPDGAAL  212 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~----~~~~lg~~~v--~~~~~~~~~~~  212 (327)
                      ...++     +++++||-.|  .|.|..+..+++..+  .+|+++... +-.+    .++..|...+  +..+..  .. 
T Consensus        70 ~~l~~-----~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~--~~-  139 (212)
T PRK13942         70 ELLDL-----KEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT--LG-  139 (212)
T ss_pred             HHcCC-----CCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc--cC-
Confidence            45556     8999999998  456778888888765  589998854 3222    3334554322  211111  11 


Q ss_pred             cCCCCCcccEEEeCCCC-CcccccccccCCCcEEEee
Q 020314          213 KSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       213 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~  248 (327)
                       ......||+|+-.... .......+.|+++|+++..
T Consensus       140 -~~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        140 -YEENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             -CCcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence             1123569999755443 3356777899999998764

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=95.88  E-value=0.027  Score=45.06  Aligned_cols=88  Identities=23%  Similarity=0.219  Sum_probs=55.7

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCCCc---
Q 020314          157 ILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTGIP---  231 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~~---  231 (327)
                      |+|.||+|.+|..+++.+...|.+|++++++ ++.+.  ..+.+ ++..+-.+. .+.+..  .++|.||++.|...   
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~~~~~~al--~~~d~vi~~~~~~~~~~   75 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVE-IIQGDLFDPDSVKAAL--KGADAVIHAAGPPPKDV   75 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEE-EEESCTTCHHHHHHHH--TTSSEEEECCHSTTTHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccc-cceeeehhhhhhhhhh--hhcchhhhhhhhhcccc
Confidence            7899999999999999999999999999976 44443  33333 333332222 122222  26999999998422   


Q ss_pred             --ccccccccCCCc--EEEeec
Q 020314          232 --WSTFEPNLGTTG--KVIDFN  249 (327)
Q Consensus       232 --~~~~~~~l~~~G--~~v~~g  249 (327)
                        ....++.++..|  +++.++
T Consensus        76 ~~~~~~~~a~~~~~~~~~v~~s   97 (183)
T PF13460_consen   76 DAAKNIIEAAKKAGVKRVVYLS   97 (183)
T ss_dssp             HHHHHHHHHHHHTTSSEEEEEE
T ss_pred             cccccccccccccccccceeee
Confidence              334444443333  676655

...

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=95.87  E-value=0.0099  Score=50.94  Aligned_cols=98  Identities=20%  Similarity=0.281  Sum_probs=56.0

Q ss_pred             HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHH----HHhcCCC-EE-EeCCCCCc
Q 020314          137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIEL----VKSLGAD-EV-LDYKTPDG  209 (327)
Q Consensus       137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~----~~~lg~~-~v-~~~~~~~~  209 (327)
                      +..+.+.+++     ++|++||-.| +| -|..+..+++..|++|++++.+ +..++    +++.|.. .+ +...  +.
T Consensus        51 ~~~~~~~~~l-----~~G~~vLDiG-cG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~--D~  121 (273)
T PF02353_consen   51 LDLLCEKLGL-----KPGDRVLDIG-CG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ--DY  121 (273)
T ss_dssp             HHHHHTTTT-------TT-EEEEES--T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES---G
T ss_pred             HHHHHHHhCC-----CCCCEEEEeC-CC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe--ec
Confidence            3345567777     9999999999 44 7888888999889999999844 44433    3455542 11 1111  11


Q ss_pred             ccccCCCCCcccEEEe-----CCCCCc----ccccccccCCCcEEEe
Q 020314          210 AALKSPSGRKYDAVIN-----CVTGIP----WSTFEPNLGTTGKVID  247 (327)
Q Consensus       210 ~~~~~~~~~~~d~v~d-----~~g~~~----~~~~~~~l~~~G~~v~  247 (327)
                      .   ... ..||.|+.     .+|.+.    ++.+-+.|+|+|+++.
T Consensus       122 ~---~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~l  164 (273)
T PF02353_consen  122 R---DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVL  164 (273)
T ss_dssp             G---G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEE
T ss_pred             c---ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEE
Confidence            1   111 26888764     454322    5566679999999974

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.035  Score=47.11  Aligned_cols=36  Identities=17%  Similarity=0.235  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~  187 (327)
                      .++++|||+||+|++|.+.++.+... |++|+.++++
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~   42 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALP   42 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCC
Confidence            67889999999999999988776655 5899998864

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.80  E-value=0.025  Score=48.31  Aligned_cols=35  Identities=17%  Similarity=0.154  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|+++++|.+.++.+...|++|+.+.++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~   41 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRN   41 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999999899999988854

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.034  Score=46.05  Aligned_cols=75  Identities=25%  Similarity=0.308  Sum_probs=47.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCE-EEeCCCCC--cccccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADE-VLDYKTPD--GAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~-v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      ++++|+|++|++|...++.+...|++|+.+++. ++.+.++..+... ..|..+.+  ........+.++|+++.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            369999999999999888777789999988854 4444444444321 22322222  111112233469999998875

>PRK07814 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.026  Score=48.13  Aligned_cols=35  Identities=11%  Similarity=0.101  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|++|++|...++.+...|++|+.++++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~   43 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAART   43 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999888899999988865

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.72  E-value=0.054  Score=46.51  Aligned_cols=76  Identities=22%  Similarity=0.255  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCCc----HH-HHHhcCCCEEE--eCCCCC--cccccCC--CCCc
Q 020314          153 QQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGARN----IE-LVKSLGADEVL--DYKTPD--GAALKSP--SGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~~~----~~-~~~~lg~~~v~--~~~~~~--~~~~~~~--~~~~  219 (327)
                      +++.+||+||++  ++|.+.++.+...|++|+.+.+.++    .+ ..+++|....+  |-.+.+  ...++..  .-+.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            578899999886  9999999888889999988775421    12 22344543222  222221  1111110  1136


Q ss_pred             ccEEEeCCC
Q 020314          220 YDAVINCVT  228 (327)
Q Consensus       220 ~d~v~d~~g  228 (327)
                      +|+++++.|
T Consensus        86 iD~lVnnAG   94 (271)
T PRK06505         86 LDFVVHAIG   94 (271)
T ss_pred             CCEEEECCc
Confidence            899999988

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.72  E-value=0.028  Score=47.92  Aligned_cols=77  Identities=16%  Similarity=0.140  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-hcCCC-EEE--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-SLGAD-EVL--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~lg~~-~v~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      ++++++|+||+|++|...++.+...|++|+.+.+. ++.+.+. ..+.. ..+  |..+.+  .+.++..  .-+.+|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            57889999999999999998888899999988764 3333332 23322 112  222211  1111110  11358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        84 i~~Ag~   89 (262)
T TIGR03325        84 IPNAGI   89 (262)
T ss_pred             EECCCC
Confidence            999873

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.72  E-value=0.027  Score=47.74  Aligned_cols=35  Identities=23%  Similarity=0.189  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|+++++|.+.++.+...|++|+.+.++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~   42 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARH   42 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            57889999999999999999988899999988854

>PRK12829 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.03  Score=47.59  Aligned_cols=36  Identities=11%  Similarity=0.080  Sum_probs=32.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++.++||+||+|++|..+++.+...|++|+.+.++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~   44 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS   44 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            467899999999999999999988899999888865

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.65  E-value=0.035  Score=51.98  Aligned_cols=71  Identities=11%  Similarity=0.053  Sum_probs=50.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      .++++|+|.| .|..|++++++++..|++|++.+.. .+.+.++++|...+ .... ....+     ..+|+|+.+.|-+
T Consensus        10 ~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~-~~~~-~~~~l-----~~~D~VV~SpGi~   81 (488)
T PRK03369         10 LPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATV-STSD-AVQQI-----ADYALVVTSPGFR   81 (488)
T ss_pred             cCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEE-cCcc-hHhHh-----hcCCEEEECCCCC
Confidence            6788999999 8999999999999999999997743 44445666776432 2111 11111     2479999999854

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.64  E-value=0.031  Score=51.84  Aligned_cols=79  Identities=11%  Similarity=0.022  Sum_probs=53.8

Q ss_pred             CCCCeEE----EEcCCChHHHHHHHHHHhCCCeEEEEecCCc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNIL----ITAASGAVGLYAVQLAKLGNTHVTATCGARN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vl----V~g~~g~~G~~~~~la~~~g~~v~~~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      ++|+++|    ++||+|++|.+++++++..|++|+++.+..+ ....+..+.+.                     +++|.
T Consensus        32 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~---------------------~~~d~   90 (450)
T PRK08261         32 RPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGA---------------------LVFDA   90 (450)
T ss_pred             CCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccE---------------------EEEEC
Confidence            7888888    8999999999999999999999998875432 21111122221                     33444


Q ss_pred             CCCC----------cccccccccCCCcEEEeecCC
Q 020314          227 VTGI----------PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       227 ~g~~----------~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .+-.          .+...++.|.++|+++.++..
T Consensus        91 ~~~~~~~~l~~~~~~~~~~l~~l~~~griv~i~s~  125 (450)
T PRK08261         91 TGITDPADLKALYEFFHPVLRSLAPCGRVVVLGRP  125 (450)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhccCCCEEEEEccc
Confidence            3321          234566788889999988754

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.033  Score=47.45  Aligned_cols=35  Identities=20%  Similarity=0.298  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.++||+||+|++|...++.+...|++|++++++
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~   38 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRN   38 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence            46789999999999999998888889999998865

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.62  E-value=0.2  Score=42.99  Aligned_cols=91  Identities=13%  Similarity=0.089  Sum_probs=55.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH-HHHHhcC---CCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI-ELVKSLG---ADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~-~~~~~lg---~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      .++++++|.| +|++|.+++..+...|+++++..++ ++. ++++.+.   ........+        ..-..+|+|++|
T Consensus       115 ~~~k~vliiG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~--------~~~~~~DivIna  185 (270)
T TIGR00507       115 RPNQRVLIIG-AGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDE--------LPLHRVDLIINA  185 (270)
T ss_pred             ccCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhh--------hcccCccEEEEC
Confidence            4578899999 5899999988888889888877755 333 3334332   212221111        011358999999


Q ss_pred             CCCCc---cc---ccccccCCCcEEEeecCC
Q 020314          227 VTGIP---WS---TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       227 ~g~~~---~~---~~~~~l~~~G~~v~~g~~  251 (327)
                      ++...   ..   .....++++..++++...
T Consensus       186 tp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~  216 (270)
T TIGR00507       186 TSAGMSGNIDEPPVPAEKLKEGMVVYDMVYN  216 (270)
T ss_pred             CCCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence            98542   11   123456677777777544

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.037  Score=47.65  Aligned_cols=77  Identities=19%  Similarity=0.093  Sum_probs=47.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHh-cCCC-EEE--eCCCCC--cccccC--CCCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKS-LGAD-EVL--DYKTPD--GAALKS--PSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~-lg~~-~v~--~~~~~~--~~~~~~--~~~~~~d~v  223 (327)
                      .++++||+||+|++|.+.++.+...|++|++++++ ++.+.+.. .+.. ..+  |..+.+  ...++.  ..-+++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            35679999999999999999888889999998865 44433332 2221 111  222221  111110  001358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999985

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.60  E-value=0.042  Score=46.81  Aligned_cols=77  Identities=12%  Similarity=0.124  Sum_probs=48.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCC----cHHHHHhcCCC--EEEeCCCCC-----cccccCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GAR----NIELVKSLGAD--EVLDYKTPD-----GAALKSPSGRK  219 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~----~~~~~~~lg~~--~v~~~~~~~-----~~~~~~~~~~~  219 (327)
                      -+|+.|||+||++|+|.+.++-...+|++++..+ +.+    -.+..++.|..  ++.|-++.+     .+..++.. +.
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G~  114 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-GD  114 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence            4889999999999999987766666788776665 332    23344554522  233433332     12222222 36


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++|++|-
T Consensus       115 V~ILVNNAGI  124 (300)
T KOG1201|consen  115 VDILVNNAGI  124 (300)
T ss_pred             ceEEEecccc
Confidence            9999999984

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.60  E-value=0.032  Score=47.29  Aligned_cols=77  Identities=16%  Similarity=0.083  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---HHHHHhcCCCE-E--EeCCCCC--cccccC--CCCCcccE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN---IELVKSLGADE-V--LDYKTPD--GAALKS--PSGRKYDA  222 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~~~~~~lg~~~-v--~~~~~~~--~~~~~~--~~~~~~d~  222 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.+.+.   .+..+..+... .  .|-.+.+  .+.++.  ..-+++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5788999999999999999988889999988765421   22334444332 1  2222222  111111  01135899


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus        87 lv~~ag~   93 (251)
T PRK12481         87 LINNAGI   93 (251)
T ss_pred             EEECCCc
Confidence            9999873

>PRK07326 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.034  Score=46.46  Aligned_cols=35  Identities=23%  Similarity=0.209  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+++|+||+|++|..+++.+...|++|+++.+.
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~   39 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARD   39 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCC
Confidence            46789999999999999998888789999998864

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.58  E-value=0.023  Score=48.38  Aligned_cols=36  Identities=25%  Similarity=0.191  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCCC-hHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASG-AVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g-~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++++|+||+| ++|.++++.+...|++|+.+++.
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~   51 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIH   51 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCC
Confidence            4678999999986 89999999999999998887754

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.58  E-value=0.021  Score=48.30  Aligned_cols=36  Identities=14%  Similarity=0.148  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      +++++||+||+|++|...++.+...|++|+.+.++.
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~   49 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSE   49 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence            577899999999999999988888899999888653

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.57  E-value=0.03  Score=47.76  Aligned_cols=77  Identities=16%  Similarity=0.148  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCC-EEE--eCCCCC--cccccC--CCCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGAD-EVL--DYKTPD--GAALKS--PSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~-~v~--~~~~~~--~~~~~~--~~~~~~d~v  223 (327)
                      +++++||+||++++|...++.+...|++|+.+.++ ++.+.+ ..++.. ..+  |-.+..  ...++.  ..-+.+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            57789999999999999998888899999988865 344333 334322 122  222211  111110  011358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        85 i~~ag~   90 (263)
T PRK06200         85 VGNAGI   90 (263)
T ss_pred             EECCCC
Confidence            999883

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.57  E-value=0.039  Score=46.51  Aligned_cols=77  Identities=18%  Similarity=0.137  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---HHHHHhcCCC-EEE--eCCCCC--cccccC--CCCCcccE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN---IELVKSLGAD-EVL--DYKTPD--GAALKS--PSGRKYDA  222 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~~~~~~lg~~-~v~--~~~~~~--~~~~~~--~~~~~~d~  222 (327)
                      +++++||+|++|++|.+.++.+...|++|+.++++..   .+..+.++.. ..+  |..+.+  ...++.  ...+++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999888889999998886432   1233344432 122  222221  111111  11135899


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus        84 li~~ag~   90 (248)
T TIGR01832        84 LVNNAGI   90 (248)
T ss_pred             EEECCCC
Confidence            9999874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.56  E-value=0.027  Score=47.52  Aligned_cols=35  Identities=14%  Similarity=0.120  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|++|++|..+++.+...|++|+.++++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~   38 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN   38 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57789999999999999999988899999888754

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.55  E-value=0.058  Score=45.92  Aligned_cols=76  Identities=14%  Similarity=0.174  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCc----HH-HHHhcCCCEEEeCC--CCC--cccccCC--CCCc
Q 020314          153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGARN----IE-LVKSLGADEVLDYK--TPD--GAALKSP--SGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~~----~~-~~~~lg~~~v~~~~--~~~--~~~~~~~--~~~~  219 (327)
                      +++.+||+||+  +++|.+.++.+...|++|+.+.+.++    .+ ..++++....+..+  +.+  .+.++..  .-+.
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            67899999988  49999999888889999988875432    12 22344433333222  211  1111110  1135


Q ss_pred             ccEEEeCCC
Q 020314          220 YDAVINCVT  228 (327)
Q Consensus       220 ~d~v~d~~g  228 (327)
                      +|+++++.|
T Consensus        89 ld~lv~nAg   97 (258)
T PRK07533         89 LDFLLHSIA   97 (258)
T ss_pred             CCEEEEcCc
Confidence            899999987

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.051  Score=46.59  Aligned_cols=77  Identities=18%  Similarity=0.095  Sum_probs=48.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEE--eCCCCC--cccccCC--CCCcccEEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVL--DYKTPD--GAALKSP--SGRKYDAVI  224 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~--~~~~~~--~~~~~~~--~~~~~d~v~  224 (327)
                      .+.++||+||+|++|...++.+...|++|+.+.++ ++.+ ..+.++....+  |..+.+  ...++..  .-+++|+++
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV   83 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46789999999999999998888889998888754 3433 33444422222  322222  1111110  114689999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.|.
T Consensus        84 ~~ag~   88 (273)
T PRK07825         84 NNAGV   88 (273)
T ss_pred             ECCCc
Confidence            99884

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=95.51  E-value=0.054  Score=46.39  Aligned_cols=77  Identities=18%  Similarity=0.236  Sum_probs=54.6

Q ss_pred             CCCCeEEEEcCCChHHHHHH-HHHHhCCCeEEEEecC-CcHH-----HHHhcCCC---EEEeCCCCC---cccccCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAV-QLAKLGNTHVTATCGA-RNIE-----LVKSLGAD---EVLDYKTPD---GAALKSPSGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~-~la~~~g~~v~~~~~~-~~~~-----~~~~lg~~---~v~~~~~~~---~~~~~~~~~~  218 (327)
                      +.|++.+|+||+.++|.+-+ ++|+ .|.+|+.+.|+ +|++     ..++.+..   .++|+...+   .++.+.+.+-
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~  125 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL  125 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence            46689999999999999755 5555 89999988876 5553     33455532   346766655   2355666777


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      .+-+.+||+|-
T Consensus       126 ~VgILVNNvG~  136 (312)
T KOG1014|consen  126 DVGILVNNVGM  136 (312)
T ss_pred             ceEEEEecccc
Confidence            78889999983

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.037  Score=47.33  Aligned_cols=35  Identities=23%  Similarity=0.203  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+||+|++|...++.+...|++|++++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~   37 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN   37 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            35679999999999999998888889999988864

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.46  E-value=0.042  Score=49.92  Aligned_cols=36  Identities=19%  Similarity=0.302  Sum_probs=32.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ..+.+|||+||+|.+|..+++.+...|.+|++++++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~   93 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE   93 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec
Confidence            567789999999999999999888889999999864

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.43  E-value=0.044  Score=45.79  Aligned_cols=76  Identities=21%  Similarity=0.215  Sum_probs=47.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-c-HHHHHhcCCCEE-EeCCCCC--cccccCC--CCCcccEEEeC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-N-IELVKSLGADEV-LDYKTPD--GAALKSP--SGRKYDAVINC  226 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~-~~~~~~lg~~~v-~~~~~~~--~~~~~~~--~~~~~d~v~d~  226 (327)
                      ++++||+|+++++|.+.++.+...|++|+.+.++. + .+.++..+...+ .|..+.+  ...+...  .-+++|+++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            35799999999999999998888999999988543 2 233344453221 2222221  1111110  11358999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        82 ag~   84 (236)
T PRK06483         82 ASD   84 (236)
T ss_pred             Ccc
Confidence            874

>PRK06194 hypothetical protein; Provisional

Probab=95.41  E-value=0.039  Score=47.64  Aligned_cols=35  Identities=17%  Similarity=0.118  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.++||+||+|++|..+++.+...|++|+.+++.
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~   39 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ   39 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46789999999999999998888889999888854

>PRK12828 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.044  Score=45.74  Aligned_cols=35  Identities=20%  Similarity=0.171  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|++|++|..+++.+...|++|+.+.+.
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~   40 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRG   40 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCC
Confidence            57889999999999999998888889999988864

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.36  E-value=0.048  Score=46.45  Aligned_cols=77  Identities=16%  Similarity=0.154  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccC--CCCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKS--PSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~d~v  223 (327)
                      ++++++|+||++++|.+.++.+...|++|+.++++ ++.+ ..+.++... .+  |..+.+  .+.++.  ..-+.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            56789999999999999999888899999998865 3333 334544321 22  222221  111111  011358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        85 v~~ag~   90 (261)
T PRK08265         85 VNLACT   90 (261)
T ss_pred             EECCCC
Confidence            999874

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.35  E-value=0.17  Score=42.19  Aligned_cols=94  Identities=18%  Similarity=0.196  Sum_probs=61.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEe-cCCcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN-THVTATC-GARNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~-~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      ++|++||=+|  +|+|-.+..+++..| ++|++++ ++.-++.++    +.+... +.+-..+.+.+- ..+..||++.-
T Consensus        50 ~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LP-f~D~sFD~vt~  125 (238)
T COG2226          50 KPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDAENLP-FPDNSFDAVTI  125 (238)
T ss_pred             CCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEechhhCC-CCCCccCEEEe
Confidence            6899999876  678999999999887 4999998 445455443    333222 221111222222 23456888877


Q ss_pred             CCCC-------CcccccccccCCCcEEEeec
Q 020314          226 CVTG-------IPWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       226 ~~g~-------~~~~~~~~~l~~~G~~v~~g  249 (327)
                      +.|-       ..+.++.+.|+|+|+++.+.
T Consensus       126 ~fglrnv~d~~~aL~E~~RVlKpgG~~~vle  156 (238)
T COG2226         126 SFGLRNVTDIDKALKEMYRVLKPGGRLLVLE  156 (238)
T ss_pred             eehhhcCCCHHHHHHHHHHhhcCCeEEEEEE
Confidence            6662       13778889999999988765

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.35  E-value=0.12  Score=47.07  Aligned_cols=93  Identities=14%  Similarity=0.174  Sum_probs=56.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-Cc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .+.+|+|.| +|++|.+++..+...|+ +++.+.++ ++ .++++.++...++.+++. ...+     ..+|+||+|++.
T Consensus       180 ~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l-~~~l-----~~aDiVI~aT~a  252 (414)
T PRK13940        180 SSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSEL-PQLI-----KKADIIIAAVNV  252 (414)
T ss_pred             cCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHH-HHHh-----ccCCEEEECcCC
Confidence            678899999 79999999999998997 55555555 34 345566652223322211 1111     248999999997


Q ss_pred             CcccccccccCCCc-EEEeecCCc
Q 020314          230 IPWSTFEPNLGTTG-KVIDFNPSP  252 (327)
Q Consensus       230 ~~~~~~~~~l~~~G-~~v~~g~~~  252 (327)
                      +..--..+.++... -+++++.+.
T Consensus       253 ~~~vi~~~~~~~~~~~~iDLavPR  276 (414)
T PRK13940        253 LEYIVTCKYVGDKPRVFIDISIPQ  276 (414)
T ss_pred             CCeeECHHHhCCCCeEEEEeCCCC
Confidence            65222222232222 356777553

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.33  E-value=0.046  Score=46.35  Aligned_cols=77  Identities=14%  Similarity=0.120  Sum_probs=46.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-C-cHHHHHhcCCCEE-EeCCCCC--cccccC--CCCCcccEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-R-NIELVKSLGADEV-LDYKTPD--GAALKS--PSGRKYDAVIN  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~-~~~~~~~lg~~~v-~~~~~~~--~~~~~~--~~~~~~d~v~d  225 (327)
                      .+++++|+||+|++|.+.++.+...|++|+.+.+. + ..+.++..+...+ .|-.+..  .+..+.  ..-+++|++++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~   85 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN   85 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            56889999999999999998888889998877643 2 2233333232211 2222221  111111  01135899999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      +.|.
T Consensus        86 ~ag~   89 (255)
T PRK06463         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9874

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.33  E-value=0.047  Score=45.98  Aligned_cols=77  Identities=23%  Similarity=0.213  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccC--CCCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKS--PSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~d~v  223 (327)
                      ++++++|+||+|++|...++.+...|++|+.++++ ++.+ ..++++... .+  |..+..  ....+.  ...+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            56789999999999999999999899999988865 3332 334555432 12  222211  011110  011358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        85 i~~ag~   90 (249)
T PRK06500         85 FINAGV   90 (249)
T ss_pred             EECCCC
Confidence            999874

>PRK06523 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.019  Score=48.85  Aligned_cols=37  Identities=22%  Similarity=0.221  Sum_probs=32.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      -+++++||+|++|++|...++.+...|++|+.+++..
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~   43 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSR   43 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCCh
Confidence            3678999999999999999988888899999988653

>PRK07109 short chain dehydrogenase; Provisional

Probab=95.32  E-value=0.049  Score=48.34  Aligned_cols=77  Identities=18%  Similarity=0.206  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE---EeCCCCC--cccccC--CCCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV---LDYKTPD--GAALKS--PSGRKY  220 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v---~~~~~~~--~~~~~~--~~~~~~  220 (327)
                      ++++++|+||+|++|..+++.+...|++|+.++++ ++.+    .++..|....   .|..+.+  .+..+.  ..-+++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            56789999999999999999888899999988865 3332    2234454322   2222221  111110  011358


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |+++++.|.
T Consensus        87 D~lInnAg~   95 (334)
T PRK07109         87 DTWVNNAMV   95 (334)
T ss_pred             CEEEECCCc
Confidence            999999984

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.31  E-value=0.51  Score=36.84  Aligned_cols=97  Identities=21%  Similarity=0.240  Sum_probs=56.8

Q ss_pred             cccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCC
Q 020314          127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYK  205 (327)
Q Consensus       127 a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~  205 (327)
                      ...|+.....+..| +..++.    -.|++|+|.|.+..+|.-+..++...|+.|+..-+. +..+..-           
T Consensus        14 ~~~PcTp~aii~lL-~~~~~~----l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~-----------   77 (160)
T PF02882_consen   14 GFVPCTPLAIIELL-EYYGID----LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT-----------   77 (160)
T ss_dssp             SS--HHHHHHHHHH-HHTT-S----TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH-----------
T ss_pred             CCcCCCHHHHHHHH-HhcCCC----CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee-----------
Confidence            34454444444455 444542    489999999999999999999999999998875432 2222110           


Q ss_pred             CCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          206 TPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                                  +..|+|+-++|.+.+- -.+.++++..++++|...
T Consensus        78 ------------~~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~~~  111 (160)
T PF02882_consen   78 ------------RRADIVVSAVGKPNLI-KADWIKPGAVVIDVGINY  111 (160)
T ss_dssp             ------------TTSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEE
T ss_pred             ------------eeccEEeeeecccccc-ccccccCCcEEEecCCcc
Confidence                        2368888888876532 245778888888888654

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.31  E-value=0.043  Score=46.47  Aligned_cols=77  Identities=19%  Similarity=0.138  Sum_probs=47.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---HHHHHhcCCCE-EE--eCCCCC--cccccC--CCCCcccE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN---IELVKSLGADE-VL--DYKTPD--GAALKS--PSGRKYDA  222 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~~~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~d~  222 (327)
                      +++++||+|+++++|.+.++.+...|++|+.+.+.+.   .+.++.++... .+  |-.+.+  ...++.  ...+.+|+
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5778999999999999999999889999987764322   22233444321 12  222111  111111  11136899


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus        89 li~~Ag~   95 (253)
T PRK08993         89 LVNNAGL   95 (253)
T ss_pred             EEECCCC
Confidence            9999984

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.29  E-value=0.052  Score=45.97  Aligned_cols=35  Identities=26%  Similarity=0.246  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+||++++|...++.+...|++|+.++++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~   39 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARR   39 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            46789999999999999998888899999998864

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.28  E-value=0.075  Score=48.68  Aligned_cols=142  Identities=13%  Similarity=0.175  Sum_probs=86.0

Q ss_pred             eeecccceEEEEecCCCCCCCCCCCEEEEE-----------------ccCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314           68 FIPASDVAGEVIGLGSEVKNFKVGDKVVAV-----------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIP  130 (327)
Q Consensus        68 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~-----------------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~  130 (327)
                      ..-|.|+++.+.+|+++++..-+|+.=+.-                 ..++.|++++.++. .+.. -..++       .
T Consensus        88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~-~t~i~-------~  158 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRT-ETDIS-------A  158 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhh-hcCCC-------C
Confidence            356889999999999998876666654310                 14556777666655 2221 00111       1


Q ss_pred             chHHHHHHHHH---HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-Cc-HHHHHhcCCCEEEeC
Q 020314          131 CAGLTAHQALT---QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RN-IELVKSLGADEVLDY  204 (327)
Q Consensus       131 ~~~~ta~~al~---~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~-~~~~~~lg~~~v~~~  204 (327)
                      .+...++.++.   +..+.     .++++|+|+| +|.+|..+++.++..|+ +|+++.++ ++ .++++.++.. .++.
T Consensus       159 ~~vSv~~~Av~la~~~~~~-----l~~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~  231 (417)
T TIGR01035       159 GAVSISSAAVELAERIFGS-----LKGKKALLIG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF  231 (417)
T ss_pred             CCcCHHHHHHHHHHHHhCC-----ccCCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH
Confidence            11122333321   22222     4788999999 69999999999999995 77777765 44 3466777764 2322


Q ss_pred             CCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          205 KTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       205 ~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      .+. .+..     .++|+||+|++.+.
T Consensus       232 ~~l-~~~l-----~~aDvVi~aT~s~~  252 (417)
T TIGR01035       232 EDL-EEYL-----AEADIVISSTGAPH  252 (417)
T ss_pred             HHH-HHHH-----hhCCEEEECCCCCC
Confidence            211 1111     35899999998654

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.28  E-value=0.051  Score=46.21  Aligned_cols=32  Identities=22%  Similarity=0.303  Sum_probs=28.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++||+|+++++|.+.++.+...|++|+.+.++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~   33 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRN   33 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence            58999999999999998888889999888865

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.26  E-value=0.29  Score=42.18  Aligned_cols=93  Identities=18%  Similarity=0.059  Sum_probs=56.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      ..+.+++|.| +|++|.+++..+...|+ +|+++.++ ++.+ +++.++....+.. ..+.  ..  .-..+|+|++|++
T Consensus       121 ~~~k~vlVlG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~--~~--~~~~~DivInaTp  194 (278)
T PRK00258        121 LKGKRILILG-AGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLEL--QE--ELADFDLIINATS  194 (278)
T ss_pred             CCCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccc--hh--ccccCCEEEECCc
Confidence            3677899999 69999999999999994 88888765 4433 3344432110111 0000  01  1145899999997


Q ss_pred             CCcc------cccccccCCCcEEEeecC
Q 020314          229 GIPW------STFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       229 ~~~~------~~~~~~l~~~G~~v~~g~  250 (327)
                      ....      ......+.+...++++-.
T Consensus       195 ~g~~~~~~~~~~~~~~l~~~~~v~DivY  222 (278)
T PRK00258        195 AGMSGELPLPPLPLSLLRPGTIVYDMIY  222 (278)
T ss_pred             CCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence            5432      122355667777776654

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.039  Score=46.68  Aligned_cols=34  Identities=21%  Similarity=0.202  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++|+|+++++|...++.+...|++|+.+++.
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~   34 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRT   34 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4679999999999999999998899999988854

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.088  Score=43.88  Aligned_cols=35  Identities=17%  Similarity=0.026  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+|+++++|.+.+..+...|++|+.+.++
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~   38 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQD   38 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence            57889999999999999888888899999888754

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.044  Score=46.58  Aligned_cols=35  Identities=17%  Similarity=0.078  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+|+++++|.++++.+...|++|+.+++.
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~   40 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLD   40 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999888899999988864

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.24  E-value=0.042  Score=48.46  Aligned_cols=35  Identities=34%  Similarity=0.523  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+||+|++|..+++.+...|++|+.++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~   39 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRN   39 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            57789999999999999998888889999998865

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=95.22  E-value=0.15  Score=43.48  Aligned_cols=99  Identities=15%  Similarity=0.224  Sum_probs=66.9

Q ss_pred             HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHH----HHHhcCCC-EE----EeC
Q 020314          135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIE----LVKSLGAD-EV----LDY  204 (327)
Q Consensus       135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~----~~~~lg~~-~v----~~~  204 (327)
                      .++..+.+..++     ++|++||=+| + |=|.+++.+|+..|++|++++ +.+..+    .+++.|.. .+    .|+
T Consensus        59 ~k~~~~~~kl~L-----~~G~~lLDiG-C-GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~  131 (283)
T COG2230          59 AKLDLILEKLGL-----KPGMTLLDIG-C-GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDY  131 (283)
T ss_pred             HHHHHHHHhcCC-----CCCCEEEEeC-C-ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccc
Confidence            455566678888     9999999998 3 357889999999999999999 444433    33456655 21    111


Q ss_pred             CCCCcccccCCCCCcccEEE-----eCCCCCc----ccccccccCCCcEEEeec
Q 020314          205 KTPDGAALKSPSGRKYDAVI-----NCVTGIP----WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       205 ~~~~~~~~~~~~~~~~d~v~-----d~~g~~~----~~~~~~~l~~~G~~v~~g  249 (327)
                      .+        .. +.||-|+     +.+|.+.    +..+-++|+++|++++..
T Consensus       132 rd--------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~  176 (283)
T COG2230         132 RD--------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHS  176 (283)
T ss_pred             cc--------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEE
Confidence            11        11 2277665     4666532    566778999999998653

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.22  E-value=0.14  Score=42.33  Aligned_cols=93  Identities=9%  Similarity=-0.002  Sum_probs=56.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      -++.+|||+| .|.++.-=+..+...|++|++++..  +....+...+.-..+. .......+     .++++||-++.+
T Consensus        23 ~~~~~VLVVG-GG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~-r~~~~~dl-----~g~~LViaATdD   95 (223)
T PRK05562         23 SNKIKVLIIG-GGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIK-GNYDKEFI-----KDKHLIVIATDD   95 (223)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChHHh-----CCCcEEEECCCC
Confidence            3677899999 6999988777888899999988754  3333222233222221 11111111     468999999988


Q ss_pred             CcccccccccC-CCcEEEeecCC
Q 020314          230 IPWSTFEPNLG-TTGKVIDFNPS  251 (327)
Q Consensus       230 ~~~~~~~~~l~-~~G~~v~~g~~  251 (327)
                      +.++..+...+ ..+.++.....
T Consensus        96 ~~vN~~I~~~a~~~~~lvn~vd~  118 (223)
T PRK05562         96 EKLNNKIRKHCDRLYKLYIDCSD  118 (223)
T ss_pred             HHHHHHHHHHHHHcCCeEEEcCC
Confidence            77665554443 44666655433

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.20  E-value=0.29  Score=41.94  Aligned_cols=97  Identities=16%  Similarity=0.094  Sum_probs=65.6

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTP  207 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~  207 (327)
                      ..||........| +..++.    -.|++|+|.|.+..+|.-++.++...|+.|+..-+. ..++.+.            
T Consensus       136 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~-t~~l~~~------------  197 (285)
T PRK14191        136 FVPATPMGVMRLL-KHYHIE----IKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL-TKDLSFY------------  197 (285)
T ss_pred             CCCCcHHHHHHHH-HHhCCC----CCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC-cHHHHHH------------
Confidence            4455554455445 555553    379999999988899999999999999998765322 1111110            


Q ss_pred             CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                          .     +..|+++-++|.+.+- -.+.++++..++++|...
T Consensus       198 ----~-----~~ADIvV~AvG~p~~i-~~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        198 ----T-----QNADIVCVGVGKPDLI-KASMVKKGAVVVDIGINR  232 (285)
T ss_pred             ----H-----HhCCEEEEecCCCCcC-CHHHcCCCcEEEEeeccc
Confidence                0     3478999999877642 245778898999998643

>PLN02253 xanthoxin dehydrogenase

Probab=95.17  E-value=0.055  Score=46.57  Aligned_cols=35  Identities=20%  Similarity=0.121  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|.+.++.+...|++|+.+.+.
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~   51 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ   51 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            57789999999999999998888889999988754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.16  E-value=0.067  Score=45.42  Aligned_cols=35  Identities=14%  Similarity=0.074  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|++|++|..+++.+...|++|+.+.++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~   40 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLN   40 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence            57889999999999999999888899999988764

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.15  E-value=0.061  Score=45.60  Aligned_cols=36  Identities=8%  Similarity=0.013  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -+++++||+||+|++|...++.+...|++++.++++
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~   40 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS   40 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC
Confidence            367789999999999999998888889998888754

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.14  E-value=0.48  Score=36.12  Aligned_cols=96  Identities=17%  Similarity=0.125  Sum_probs=66.7

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..++........+ +..+++    -+|++|+|+|.+..+|.-++.++...|++|+...+. ...+..             
T Consensus         7 ~~p~t~~a~~~ll-~~~~~~----~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~-------------   68 (140)
T cd05212           7 FVSPVAKAVKELL-NKEGVR----LDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSK-------------   68 (140)
T ss_pred             ccccHHHHHHHHH-HHcCCC----CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHH-------------
Confidence            3444444444444 444553    489999999999999999999999999998877643 222110             


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                           .     +..|+++-++|.+.+ .-.+.++++-.++++|...
T Consensus        69 -----v-----~~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          69 -----V-----HDADVVVVGSPKPEK-VPTEWIKPGATVINCSPTK  103 (140)
T ss_pred             -----H-----hhCCEEEEecCCCCc-cCHHHcCCCCEEEEcCCCc
Confidence                 0     347899999987642 3356789999999888665

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=95.14  E-value=0.076  Score=48.27  Aligned_cols=35  Identities=23%  Similarity=0.291  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+||+|++|.+.++.+...|++|+++++.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~  211 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSN  211 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57789999999999999998888889999988854

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.14  E-value=0.011  Score=49.45  Aligned_cols=36  Identities=17%  Similarity=0.193  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      .+++++|+||+|++|...++.+...|.+|+.+.+..
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~   37 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSA   37 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc
Confidence            356799999999999999998888999999988653

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=95.12  E-value=0.22  Score=41.08  Aligned_cols=98  Identities=17%  Similarity=0.127  Sum_probs=58.3

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHH----HHHhcCCCEEEeCCCCCcccccC
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIE----LVKSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~----~~~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      +..++     +++++||-.|  .|.|..+..+++..+  .+|++++.. +-.+    .++.++.+.+.-...+.....  
T Consensus        71 ~~l~~-----~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~--  141 (215)
T TIGR00080        71 ELLEL-----KPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGW--  141 (215)
T ss_pred             HHhCC-----CCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCC--
Confidence            44556     7899999998  456777788888765  368888844 3222    334555443211111111111  


Q ss_pred             CCCCcccEEEeCCCCC-cccccccccCCCcEEEee
Q 020314          215 PSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~  248 (327)
                      .....||+|+-+.... ......+.|+++|+++..
T Consensus       142 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       142 EPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             cccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            1124699988544333 355777899999998754

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.08  E-value=0.099  Score=44.97  Aligned_cols=77  Identities=19%  Similarity=0.215  Sum_probs=47.6

Q ss_pred             CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCC----cHH-HHHhcCCCEEE--eCCCCC--cccccCC--CCCc
Q 020314          153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGAR----NIE-LVKSLGADEVL--DYKTPD--GAALKSP--SGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~----~~~-~~~~lg~~~v~--~~~~~~--~~~~~~~--~~~~  219 (327)
                      .++.+||+||+  +++|.++++.+...|++|+.+.+.+    +.+ ..++++....+  |-.+.+  ....+..  .-+.
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57889999987  7999999988888999998877543    222 22344533222  322222  1111110  1146


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        84 iDilVnnAG~   93 (274)
T PRK08415         84 IDFIVHSVAF   93 (274)
T ss_pred             CCEEEECCcc
Confidence            8999999983

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.05  E-value=0.074  Score=46.79  Aligned_cols=71  Identities=25%  Similarity=0.340  Sum_probs=45.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|+|+||+|-+|..+++.+...|.+|.+.+++ ++.......+.+.+. |..+.. .+....  .++|+||++++.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~-~l~~al--~g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPE-TLPPSF--KGVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHH-HHHHHH--CCCCEEEECCCC
Confidence            59999999999999998888889999999865 333333344543322 222211 111111  358999998763

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.03  E-value=0.074  Score=45.18  Aligned_cols=75  Identities=25%  Similarity=0.247  Sum_probs=46.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcC-CC-EE--EeCCCCC--cccccCC---CCCcccEE
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLG-AD-EV--LDYKTPD--GAALKSP---SGRKYDAV  223 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg-~~-~v--~~~~~~~--~~~~~~~---~~~~~d~v  223 (327)
                      +++||+||+|++|...++.+...|++|+.+.++ ++.+.+ ..++ .. ..  .|-.+.+  .+.+...   ..+.+|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            469999999999999998888889999988854 444333 3332 11 12  2322222  1111111   03468999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            999984

>PRK04148 hypothetical protein; Provisional

Probab=95.03  E-value=0.079  Score=39.86  Aligned_cols=73  Identities=16%  Similarity=0.176  Sum_probs=48.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCC-CCCcccccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYK-TPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~-~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .++.++++.| .| .|...+..+...|.+|++++ +++..+.++..+.+.+.+.- +.+.++.     +++|+|+..-..
T Consensus        15 ~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y-----~~a~liysirpp   87 (134)
T PRK04148         15 GKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIY-----KNAKLIYSIRPP   87 (134)
T ss_pred             ccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHH-----hcCCEEEEeCCC
Confidence            4668899999 67 88766666667899999999 45667777777765544321 1111211     357888877765


Q ss_pred             Cc
Q 020314          230 IP  231 (327)
Q Consensus       230 ~~  231 (327)
                      +.
T Consensus        88 ~e   89 (134)
T PRK04148         88 RD   89 (134)
T ss_pred             HH
Confidence            54

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.01  E-value=0.044  Score=46.43  Aligned_cols=37  Identities=16%  Similarity=0.083  Sum_probs=31.7

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          152 GQQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       152 ~~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      -.+++++|+||+  +++|.+.++.+...|++|+.+.+++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~   43 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND   43 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch
Confidence            367899999998  7999999988888999999887653

>PRK08264 short chain dehydrogenase; Validated

Probab=95.01  E-value=0.065  Score=44.80  Aligned_cols=72  Identities=22%  Similarity=0.239  Sum_probs=46.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCC-cHHHHHhcCCC-EEE--eCCCCC--cccccCCCCCcccEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGAR-NIELVKSLGAD-EVL--DYKTPD--GAALKSPSGRKYDAVIN  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~~-~~~~~~~lg~~-~v~--~~~~~~--~~~~~~~~~~~~d~v~d  225 (327)
                      .+.+++|+||+|++|..+++.+...|+ +|+.+.++. +.+.   .+.. ..+  |..+.+  ....+..  ..+|++|.
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~   79 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILVN   79 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence            567899999999999999998888999 888888653 3221   2222 122  222211  1122221  34899999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      +.|.
T Consensus        80 ~ag~   83 (238)
T PRK08264         80 NAGI   83 (238)
T ss_pred             CCCc
Confidence            9886

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.96  E-value=0.055  Score=44.67  Aligned_cols=95  Identities=19%  Similarity=0.195  Sum_probs=59.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCC--EEEeCCCCCcccccCCCCCcccEEEe----
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGAD--EVLDYKTPDGAALKSPSGRKYDAVIN----  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~--~v~~~~~~~~~~~~~~~~~~~d~v~d----  225 (327)
                      +|.+||=.|+.||  ++..-+| ..|++|++++ +++-.+.++.-...  --++|.....+.+... ++.||+|++    
T Consensus        59 ~g~~vLDvGCGgG--~Lse~mA-r~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~~-~~~FDvV~cmEVl  134 (243)
T COG2227          59 PGLRVLDVGCGGG--ILSEPLA-RLGASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLASA-GGQFDVVTCMEVL  134 (243)
T ss_pred             CCCeEEEecCCcc--HhhHHHH-HCCCeeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHhc-CCCccEEEEhhHH
Confidence            7788999996554  4444444 4689999999 44555555422111  1145554433222222 267999985    


Q ss_pred             -CCCCCc--ccccccccCCCcEEEeecCC
Q 020314          226 -CVTGIP--WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       226 -~~g~~~--~~~~~~~l~~~G~~v~~g~~  251 (327)
                       .+..+.  +..+.++++|+|.++.....
T Consensus       135 EHv~dp~~~~~~c~~lvkP~G~lf~STin  163 (243)
T COG2227         135 EHVPDPESFLRACAKLVKPGGILFLSTIN  163 (243)
T ss_pred             HccCCHHHHHHHHHHHcCCCcEEEEeccc
Confidence             555444  66788999999999876544

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.95  E-value=0.11  Score=44.57  Aligned_cols=77  Identities=18%  Similarity=0.176  Sum_probs=47.2

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCC----cHH-HHHhcCCCEEE--eCCCCC--cccccC--CCCC
Q 020314          152 GQQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGAR----NIE-LVKSLGADEVL--DYKTPD--GAALKS--PSGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~----~~~-~~~~lg~~~v~--~~~~~~--~~~~~~--~~~~  218 (327)
                      -.++++||+||+  +++|.+.++.+...|++|+.+.+.+    +.+ +.++++....+  |-.+..  .+..+.  ..-+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            467889999986  7999999988888999998776542    222 22344532222  222211  111111  1113


Q ss_pred             cccEEEeCCC
Q 020314          219 KYDAVINCVT  228 (327)
Q Consensus       219 ~~d~v~d~~g  228 (327)
                      .+|+++++.|
T Consensus        88 ~iD~lv~nAG   97 (272)
T PRK08159         88 KLDFVVHAIG   97 (272)
T ss_pred             CCcEEEECCc
Confidence            5899999987

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.95  E-value=0.065  Score=45.19  Aligned_cols=35  Identities=14%  Similarity=0.174  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+++|+||+|++|...++.+...|++|+.+.+.
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~   38 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRD   38 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC
Confidence            56789999999999999998877789999988865

>PRK06197 short chain dehydrogenase; Provisional

Probab=94.94  E-value=0.064  Score=46.91  Aligned_cols=35  Identities=14%  Similarity=0.184  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+||+|++|..+++.+...|++|+.+++.
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~   49 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN   49 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999998888889999888864

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=94.92  E-value=0.16  Score=40.38  Aligned_cols=95  Identities=17%  Similarity=0.115  Sum_probs=61.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-CcHH----HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGA-RNIE----LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~-~~~~----~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      ++++.++=+|+  +.|...++++... .++|+++.++ ++.+    .++++|.+.+..-...-.+.+....  .+|.+|=
T Consensus        33 ~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~--~~daiFI  108 (187)
T COG2242          33 RPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP--SPDAIFI  108 (187)
T ss_pred             CCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC--CCCEEEE
Confidence            89997777774  4577888888543 4699999965 4443    3457887754333332222222221  4888885


Q ss_pred             CCCCC---cccccccccCCCcEEEeecC
Q 020314          226 CVTGI---PWSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       226 ~~g~~---~~~~~~~~l~~~G~~v~~g~  250 (327)
                      .=|..   .++.++..|+++|++|.-..
T Consensus       109 GGg~~i~~ile~~~~~l~~ggrlV~nai  136 (187)
T COG2242         109 GGGGNIEEILEAAWERLKPGGRLVANAI  136 (187)
T ss_pred             CCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence            44422   28889999999999986543

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.90  E-value=0.46  Score=40.78  Aligned_cols=95  Identities=20%  Similarity=0.178  Sum_probs=66.4

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||.....+..+ +..++.    -.|++++|.|.+..+|.-...++...|++|+..-+. ..++.              
T Consensus       138 ~~PcTp~av~~ll-~~~~i~----l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~--------------  198 (285)
T PRK10792        138 LRPCTPRGIMTLL-ERYGID----TYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH--------------  198 (285)
T ss_pred             CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH--------------
Confidence            3466555555555 455552    379999999988889999999999999988766532 21110              


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                          ..     +..|+++.++|.+.+-. .+.++++..++++|..
T Consensus       199 ----~~-----~~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin  233 (285)
T PRK10792        199 ----HV-----RNADLLVVAVGKPGFIP-GEWIKPGAIVIDVGIN  233 (285)
T ss_pred             ----HH-----hhCCEEEEcCCCccccc-HHHcCCCcEEEEcccc
Confidence                00     34799999999776322 3788899999999854

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=94.88  E-value=0.11  Score=41.52  Aligned_cols=75  Identities=19%  Similarity=0.200  Sum_probs=50.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHHHHHhcCC--CE-EEeC---CCCCc----ccccCCCCCccc
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIELVKSLGA--DE-VLDY---KTPDG----AALKSPSGRKYD  221 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~~~~~lg~--~~-v~~~---~~~~~----~~~~~~~~~~~d  221 (327)
                      .+..+|+||++++|.+..+.+...|++|.+.+.+  ...+.++.++.  ++ .+..   +..+.    +...+.- +..+
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~-g~ps   92 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL-GTPS   92 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc-CCCc
Confidence            4458999999999999999999999999988833  34556677775  22 2221   11121    1111122 2689


Q ss_pred             EEEeCCCC
Q 020314          222 AVINCVTG  229 (327)
Q Consensus       222 ~v~d~~g~  229 (327)
                      ++++|.|-
T Consensus        93 vlVncAGI  100 (256)
T KOG1200|consen   93 VLVNCAGI  100 (256)
T ss_pred             EEEEcCcc
Confidence            99999994

>PRK12939 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.076  Score=44.65  Aligned_cols=35  Identities=20%  Similarity=0.184  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+++|+|++|++|...+..+...|++++.+.+.
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~   40 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL   40 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence            57889999999999999999888899999888754

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.87  E-value=0.31  Score=41.70  Aligned_cols=96  Identities=24%  Similarity=0.248  Sum_probs=64.6

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTP  207 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~  207 (327)
                      ..||........| +..++.    -.|++|+|.|.+..+|.=...++...|+.|+ ++.+...++.+.            
T Consensus       136 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVt-i~hs~T~~l~~~------------  197 (281)
T PRK14183        136 FVPCTPLGVMELL-EEYEID----VKGKDVCVVGASNIVGKPMAALLLNANATVD-ICHIFTKDLKAH------------  197 (281)
T ss_pred             CCCCcHHHHHHHH-HHcCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEE-EeCCCCcCHHHH------------
Confidence            3455544444444 455553    4899999999999999999999998899887 443321111110            


Q ss_pred             CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314          208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                          .     +..|+++-++|.+.+ .-.+.++++..++++|..
T Consensus       198 ----~-----~~ADIvV~AvGkp~~-i~~~~vk~gavvIDvGin  231 (281)
T PRK14183        198 ----T-----KKADIVIVGVGKPNL-ITEDMVKEGAIVIDIGIN  231 (281)
T ss_pred             ----H-----hhCCEEEEecCcccc-cCHHHcCCCcEEEEeecc
Confidence                0     347899988887664 335678888888898854

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.86  E-value=0.098  Score=44.90  Aligned_cols=35  Identities=23%  Similarity=0.295  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+||+|++|...++.+...|++|++++++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKT   39 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            56789999999999999998888889999988854

>PRK05717 oxidoreductase; Validated

Probab=94.83  E-value=0.15  Score=43.10  Aligned_cols=78  Identities=17%  Similarity=0.139  Sum_probs=48.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-E--EeCCCCC--cccccCC--CCCcccE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-V--LDYKTPD--GAALKSP--SGRKYDA  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v--~~~~~~~--~~~~~~~--~~~~~d~  222 (327)
                      .++++++|+|++|++|..+++.+...|++|+.+.+. ++.+ ..+.++... .  .|-.+.+  ...++..  .-+.+|+
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            467899999999999999998888889999888754 3322 334444321 1  1222211  0111110  1135899


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus        88 li~~ag~   94 (255)
T PRK05717         88 LVCNAAI   94 (255)
T ss_pred             EEECCCc
Confidence            9999884

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=94.83  E-value=0.093  Score=43.12  Aligned_cols=94  Identities=19%  Similarity=0.160  Sum_probs=62.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHH----HHHhcCCCEEEeCCC-CC-cccccCCCCCcccE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIE----LVKSLGADEVLDYKT-PD-GAALKSPSGRKYDA  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~----~~~~lg~~~v~~~~~-~~-~~~~~~~~~~~~d~  222 (327)
                      ++.++||=.|  +.+|+.++++|..+.  .+++++..+ ++.+    ..++.|.+..+..-. .+ ...+.....+.||+
T Consensus        58 ~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~fDl  135 (219)
T COG4122          58 SGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGSFDL  135 (219)
T ss_pred             cCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCCccE
Confidence            6778899988  678999999999775  478888754 4433    345777765322211 12 22233233467999


Q ss_pred             EE-eCCCCC---cccccccccCCCcEEEe
Q 020314          223 VI-NCVTGI---PWSTFEPNLGTTGKVID  247 (327)
Q Consensus       223 v~-d~~g~~---~~~~~~~~l~~~G~~v~  247 (327)
                      || |+.-..   .++.++++|+++|-+|.
T Consensus       136 iFIDadK~~yp~~le~~~~lLr~GGliv~  164 (219)
T COG4122         136 VFIDADKADYPEYLERALPLLRPGGLIVA  164 (219)
T ss_pred             EEEeCChhhCHHHHHHHHHHhCCCcEEEE
Confidence            96 666532   28899999999998874

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.81  E-value=0.47  Score=40.76  Aligned_cols=96  Identities=22%  Similarity=0.230  Sum_probs=66.1

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........| +..++.    -.|++|+|.|.+..+|.-.+.++...|++|+...+. ..+.               
T Consensus       137 ~~PcTp~aii~lL-~~~~i~----l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~---------------  196 (285)
T PRK14189        137 FRPCTPYGVMKML-ESIGIP----LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLA---------------  196 (285)
T ss_pred             CcCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHH---------------
Confidence            3455544445445 455553    489999999988888999999999999998864321 1111               


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                         +..     +..|+++-++|.+.+-. .+.++++..++++|...
T Consensus       197 ---~~~-----~~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~  233 (285)
T PRK14189        197 ---AHT-----RQADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR  233 (285)
T ss_pred             ---HHh-----hhCCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence               001     34789999998665322 27899999999998653

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.80  E-value=0.094  Score=46.82  Aligned_cols=35  Identities=20%  Similarity=0.123  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+|||+||+|.+|..+++.+...|.+|+++.+.
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~   37 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLD   37 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCC
Confidence            46789999999999999999998889999988754

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.79  E-value=0.08  Score=44.57  Aligned_cols=35  Identities=14%  Similarity=0.140  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|...++.+...|++|+.++++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~   36 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN   36 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence            46789999999999999999888899999888754

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=94.78  E-value=0.53  Score=36.39  Aligned_cols=93  Identities=15%  Similarity=0.055  Sum_probs=56.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcH-HHHHhcCCCE-EEeCCCCCcccccCCCCCcccEEEeCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNI-ELVKSLGADE-VLDYKTPDGAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~-~~~~~lg~~~-v~~~~~~~~~~~~~~~~~~~d~v~d~~  227 (327)
                      .++.+++|.| .|.+|...++.+...| .++++..++ ++. +.++.++... ..+..+. .+.     -.++|+|+.|+
T Consensus        17 ~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~Dvvi~~~   89 (155)
T cd01065          17 LKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL-EEL-----LAEADLIINTT   89 (155)
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch-hhc-----cccCCEEEeCc
Confidence            3578899999 5999999998888876 567777654 333 3445555421 0111111 111     24689999999


Q ss_pred             CCCcc-----cccccccCCCcEEEeecCC
Q 020314          228 TGIPW-----STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       228 g~~~~-----~~~~~~l~~~G~~v~~g~~  251 (327)
                      +....     ......++++..+++++..
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~v~D~~~~  118 (155)
T cd01065          90 PVGMKPGDELPLPPSLLKPGGVVYDVVYN  118 (155)
T ss_pred             CCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence            86542     1112345666677776543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.77  E-value=0.08  Score=45.49  Aligned_cols=35  Identities=17%  Similarity=0.123  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+||+|++|.+.++.+...|++|+.+.++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~   43 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRN   43 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999888899999888864

>PRK07023 short chain dehydrogenase; Provisional

Probab=94.76  E-value=0.13  Score=43.18  Aligned_cols=33  Identities=15%  Similarity=0.141  Sum_probs=29.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      ++||+||+|++|..+++.+...|++|+.++++.
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~   35 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSR   35 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCc
Confidence            599999999999999988888899999888653

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.75  E-value=0.27  Score=42.14  Aligned_cols=64  Identities=14%  Similarity=0.159  Sum_probs=42.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .+++++|.| +||.+.+++..+...|+ +++.+.++ +|.+ +++.++...    ..   . .   ....+|+|+||++
T Consensus       121 ~~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~~---~-~---~~~~~dlvINaTp  187 (272)
T PRK12550        121 PDLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----RP---D-L---GGIEADILVNVTP  187 (272)
T ss_pred             CCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----hh---h-c---ccccCCEEEECCc
Confidence            456899999 79999999999988998 57777765 3433 444553211    00   0 0   1134899999986

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=94.73  E-value=0.12  Score=44.31  Aligned_cols=94  Identities=17%  Similarity=0.092  Sum_probs=56.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH-HHHhcCCCEE-EeCCCCCcccccCCCCC-cccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE-LVKSLGADEV-LDYKTPDGAALKSPSGR-KYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~-~~~~lg~~~v-~~~~~~~~~~~~~~~~~-~~d~v~d~  226 (327)
                      .++++++|.| +||.+.+++..+...|+ +++++-|+ +|.+ +++.++.... +....     ....... .+|+++|+
T Consensus       124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~-----~~~~~~~~~~dliINa  197 (283)
T COG0169         124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA-----LADLEGLEEADLLINA  197 (283)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc-----ccccccccccCEEEEC
Confidence            4689999999 79999999999999997 67777765 4533 4444442211 00000     0001111 48999999


Q ss_pred             CCCCccc------ccccccCCCcEEEeecCC
Q 020314          227 VTGIPWS------TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       227 ~g~~~~~------~~~~~l~~~G~~v~~g~~  251 (327)
                      ++-....      ....++++.-.+.++-..
T Consensus       198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~  228 (283)
T COG0169         198 TPVGMAGPEGDSPVPAELLPKGAIVYDVVYN  228 (283)
T ss_pred             CCCCCCCCCCCCCCcHHhcCcCCEEEEeccC
Confidence            9743211      113456666666665433

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.69  E-value=0.082  Score=44.87  Aligned_cols=37  Identities=14%  Similarity=0.114  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN  189 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~  189 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+.++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~   50 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTN   50 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcH
Confidence            5789999999999999999998889999998886543

>PRK07454 short chain dehydrogenase; Provisional

Probab=94.68  E-value=0.098  Score=43.84  Aligned_cols=36  Identities=17%  Similarity=0.123  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++++|+|++|++|..+++.+...|++|++++++
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~   39 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARS   39 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            456789999999999999999888899999998865

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.67  E-value=0.096  Score=44.29  Aligned_cols=35  Identities=20%  Similarity=0.146  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|++|++|...++.+...|++|+.+.+.
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~   37 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLN   37 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            46789999999999999998888889999998864

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=94.66  E-value=0.21  Score=40.29  Aligned_cols=93  Identities=17%  Similarity=0.215  Sum_probs=55.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEecC-CcHHH----HHhcCCCEEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKL-GNTHVTATCGA-RNIEL----VKSLGADEVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~-~g~~v~~~~~~-~~~~~----~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      +++.+||-.|+  |.|..++.+++. .+++|++++.+ +..+.    ++..+.+.+ .....+......  .+.+|+|+-
T Consensus        44 ~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~d~~~~~~--~~~fDlV~~  118 (187)
T PRK00107         44 PGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHGRAEEFGQ--EEKFDVVTS  118 (187)
T ss_pred             CCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEeccHhhCCC--CCCccEEEE
Confidence            55888999884  345666666654 46799999854 33333    334554432 111111111111  357999996


Q ss_pred             CCCCC---cccccccccCCCcEEEeec
Q 020314          226 CVTGI---PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       226 ~~g~~---~~~~~~~~l~~~G~~v~~g  249 (327)
                      .....   .+..+.+.|+++|+++.+-
T Consensus       119 ~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        119 RAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             ccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            44322   2667788999999998764

>PRK06484 short chain dehydrogenase; Validated

Probab=94.64  E-value=0.079  Score=50.11  Aligned_cols=78  Identities=21%  Similarity=0.256  Sum_probs=50.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE---EEeCCCCC--cccccCC--CCCcccE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE---VLDYKTPD--GAALKSP--SGRKYDA  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~---v~~~~~~~--~~~~~~~--~~~~~d~  222 (327)
                      .+++++||+|+++++|.+.++.+...|++|+.+.+. ++.+ ..++++...   ..|-.+.+  ...++..  .-+.+|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            467899999999999999999999999999998854 4443 344555432   12322222  1111111  1135899


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus        83 li~nag~   89 (520)
T PRK06484         83 LVNNAGV   89 (520)
T ss_pred             EEECCCc
Confidence            9999874

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.64  E-value=0.57  Score=40.55  Aligned_cols=95  Identities=21%  Similarity=0.193  Sum_probs=64.5

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||.....+..| +..++.    -.|++|+|+|.++.+|.-.+.++...|+.|++.. ++...+.              
T Consensus       137 ~~PcTp~ai~~ll-~~~~i~----~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e--------------  197 (296)
T PRK14188        137 LVPCTPLGCMMLL-RRVHGD----LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPA--------------  197 (296)
T ss_pred             CcCCCHHHHHHHH-HHhCCC----CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHH--------------
Confidence            4565554555445 444442    4899999999999999999999988899888774 3322110              


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~  252 (327)
                          ..     +..|+|+-++|.+. +...  .++++..++++|...
T Consensus       198 ----~~-----~~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~  233 (296)
T PRK14188        198 ----VC-----RRADILVAAVGRPEMVKGD--WIKPGATVIDVGINR  233 (296)
T ss_pred             ----HH-----hcCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence                00     23688888888765 3332  388888889988653

>PRK06198 short chain dehydrogenase; Provisional

Probab=94.63  E-value=0.052  Score=46.09  Aligned_cols=77  Identities=17%  Similarity=0.175  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHH----HHHhcCCCEE---EeCCCCC--cccccCC--CCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIE----LVKSLGADEV---LDYKTPD--GAALKSP--SGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~----~~~~lg~~~v---~~~~~~~--~~~~~~~--~~~~  219 (327)
                      ++++++|+|++|++|..+++.+...|++ |+.+.+. ++..    .++..+....   .|..+.+  .+.++..  .-++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6788999999999999999999989998 8887754 3322    2233343321   2322221  1111111  0135


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|.++++.|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            8999999984

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=94.63  E-value=0.12  Score=44.76  Aligned_cols=74  Identities=12%  Similarity=0.047  Sum_probs=45.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcH-HHHHhcCCCE-EEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNI-ELVKSLGADE-VLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~-~~~~~lg~~~-v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      ++++++|.| +|+++.+++..+...|+ +++.+.|+ +|. ++++.++... +...... .......  ..+|+|++|++
T Consensus       124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~-~~~~~~~--~~~DiVInaTp  199 (282)
T TIGR01809       124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGD-SGGLAIE--KAAEVLVSTVP  199 (282)
T ss_pred             CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccch-hhhhhcc--cCCCEEEECCC
Confidence            578899999 79999999999989998 67776665 443 3445544221 1111100 0000111  35899999997


Q ss_pred             CC
Q 020314          229 GI  230 (327)
Q Consensus       229 ~~  230 (327)
                      ..
T Consensus       200 ~g  201 (282)
T TIGR01809       200 AD  201 (282)
T ss_pred             CC
Confidence            43

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.63  E-value=0.13  Score=43.92  Aligned_cols=35  Identities=20%  Similarity=0.185  Sum_probs=29.5

Q ss_pred             CCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAA--SGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~--~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++.+||+||  ++++|.+.++.+...|++|+...+.
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~   41 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVV   41 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCc
Confidence            5778999996  6799999998888899999887643

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.62  E-value=0.16  Score=39.61  Aligned_cols=79  Identities=20%  Similarity=0.220  Sum_probs=56.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHHHHHhcCCCEEEeCCCC----C-cccc--cCCCCCcccE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIELVKSLGADEVLDYKTP----D-GAAL--KSPSGRKYDA  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~~~~~lg~~~v~~~~~~----~-~~~~--~~~~~~~~d~  222 (327)
                      .+|-..||+|+++++|.+++.-+...|+.++..+-+  .-.+.++++|-.-++...+.    + ...+  .+..-+..|+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            466678999999999999999988899998888733  45678899998777654332    2 1111  1111235899


Q ss_pred             EEeCCCCC
Q 020314          223 VINCVTGI  230 (327)
Q Consensus       223 v~d~~g~~  230 (327)
                      .++|.|..
T Consensus        87 ~vncagia   94 (260)
T KOG1199|consen   87 LVNCAGIA   94 (260)
T ss_pred             eeecccee
Confidence            99999853

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.57  E-value=0.088  Score=40.66  Aligned_cols=94  Identities=19%  Similarity=0.271  Sum_probs=58.8

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC----cccccC--CCCCcccEEEeCCCCC
Q 020314          157 ILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD----GAALKS--PSGRKYDAVINCVTGI  230 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~----~~~~~~--~~~~~~d~v~d~~g~~  230 (327)
                      |+|.| +|.+|...+..++..|.+|..+.+..+.+..++.|..... .....    ......  .....+|++|-|+-..
T Consensus         1 I~I~G-~GaiG~~~a~~L~~~g~~V~l~~r~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~   78 (151)
T PF02558_consen    1 ILIIG-AGAIGSLYAARLAQAGHDVTLVSRSPRLEAIKEQGLTITG-PDGDETVQPPIVISAPSADAGPYDLVIVAVKAY   78 (151)
T ss_dssp             EEEES-TSHHHHHHHHHHHHTTCEEEEEESHHHHHHHHHHCEEEEE-TTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred             CEEEC-cCHHHHHHHHHHHHCCCceEEEEccccHHhhhheeEEEEe-cccceecccccccCcchhccCCCcEEEEEeccc
Confidence            68899 7999998888887799999999876665656655543221 11111    011111  1345799999999765


Q ss_pred             c----ccccccccCCCcEEEeecCCc
Q 020314          231 P----WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       231 ~----~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .    ++.+...+.++..++.+.+..
T Consensus        79 ~~~~~l~~l~~~~~~~t~iv~~qNG~  104 (151)
T PF02558_consen   79 QLEQALQSLKPYLDPNTTIVSLQNGM  104 (151)
T ss_dssp             GHHHHHHHHCTGEETTEEEEEESSSS
T ss_pred             chHHHHHHHhhccCCCcEEEEEeCCC
Confidence            4    344455666667777775543

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK05875 short chain dehydrogenase; Provisional

Probab=94.57  E-value=0.081  Score=45.39  Aligned_cols=35  Identities=14%  Similarity=0.121  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|++|++|..+++.+...|++|+.++++
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~   40 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN   40 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence            56889999999999999999999899999988864

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.57  E-value=0.1  Score=44.26  Aligned_cols=34  Identities=6%  Similarity=0.032  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++||+|++|++|...++.+...|++|+.++++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~   35 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADIN   35 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            4579999999999999998888889999888854

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.55  E-value=0.16  Score=49.37  Aligned_cols=75  Identities=19%  Similarity=0.221  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC----------------------cHHHHHhcCCCEEEeCCC-CCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR----------------------NIELVKSLGADEVLDYKT-PDG  209 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~----------------------~~~~~~~lg~~~v~~~~~-~~~  209 (327)
                      .+++|+|+| +|+.|+.++..+...|.+|+++.+..                      +.++++.+|.+..++..- .+.
T Consensus       309 ~~kkVaIIG-~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIG-AGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            589999999 79999999999999999988887432                      235567788776555431 111


Q ss_pred             ccccCCCCCcccEEEeCCCCC
Q 020314          210 AALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       210 ~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      .....  ..++|.+|.++|..
T Consensus       388 ~~~~l--~~~~DaV~latGa~  406 (639)
T PRK12809        388 TFSDL--TSEYDAVFIGVGTY  406 (639)
T ss_pred             CHHHH--HhcCCEEEEeCCCC
Confidence            11111  13589999999864

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.54  E-value=0.12  Score=43.20  Aligned_cols=35  Identities=23%  Similarity=0.155  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.++||+|++|++|...++.+...|.+|+.+.++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~   38 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSN   38 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46789999999999999998888889998888865

>PRK06720 hypothetical protein; Provisional

Probab=94.51  E-value=0.17  Score=40.02  Aligned_cols=35  Identities=17%  Similarity=0.081  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++..++|+||++++|...+..+...|++|+.+.++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~   49 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDID   49 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            57789999999999999998888889999888754

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.50  E-value=0.11  Score=44.16  Aligned_cols=36  Identities=28%  Similarity=0.167  Sum_probs=30.3

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -+++.++|+||++  ++|.+.++.+...|++|+...++
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~   43 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS   43 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc
Confidence            3678899999987  89999988888889998887754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=94.49  E-value=0.14  Score=42.95  Aligned_cols=33  Identities=24%  Similarity=0.334  Sum_probs=29.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      +++.++|+|++|++|...++.+...|++++...
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~   34 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGC   34 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEc
Confidence            357899999999999999999998999988765

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=94.49  E-value=0.32  Score=35.76  Aligned_cols=92  Identities=18%  Similarity=0.210  Sum_probs=56.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcHHH----HHhcCCCEE--EeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNIEL----VKSLGADEV--LDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~~~----~~~lg~~~v--~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      .++++|+-.| +| .|..+..+++..+ .++++++.+ ...+.    ++.++...+  +..+...  ... .....+|.|
T Consensus        18 ~~~~~vldlG-~G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~D~v   92 (124)
T TIGR02469        18 RPGDVLWDIG-AG-SGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPE--ALE-DSLPEPDRV   92 (124)
T ss_pred             CCCCEEEEeC-CC-CCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccc--cCh-hhcCCCCEE
Confidence            5678899998 44 4999999999764 589999844 33333    334443322  2111110  011 112469999


Q ss_pred             EeCCCCC----cccccccccCCCcEEEee
Q 020314          224 INCVTGI----PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       224 ~d~~g~~----~~~~~~~~l~~~G~~v~~  248 (327)
                      +...+..    .++.+.+.|+++|+++..
T Consensus        93 ~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        93 FIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             EECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            8755422    267788899999998754

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK00536 speE spermidine synthase; Provisional

Probab=94.48  E-value=0.064  Score=45.51  Aligned_cols=95  Identities=21%  Similarity=0.115  Sum_probs=59.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCCccc---ccCCCCCcccEEE-eC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGAA---LKSPSGRKYDAVI-NC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~---~~~~~~~~~d~v~-d~  226 (327)
                      .+.++|||.|  ||=|.++-+++|+-. +|+.+. +.+-.+.++++-....-..+++..++   ......+.||+|| |+
T Consensus        71 ~~pk~VLIiG--GGDGg~~REvLkh~~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs  147 (262)
T PRK00536         71 KELKEVLIVD--GFDLELAHQLFKYDT-HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ  147 (262)
T ss_pred             CCCCeEEEEc--CCchHHHHHHHCcCC-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence            5678999998  566788899999864 888887 44445555542221100112222111   1122235699986 65


Q ss_pred             CCCCc-ccccccccCCCcEEEeec
Q 020314          227 VTGIP-WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       227 ~g~~~-~~~~~~~l~~~G~~v~~g  249 (327)
                      +-.+. ++...++|+++|.++.-+
T Consensus       148 ~~~~~fy~~~~~~L~~~Gi~v~Qs  171 (262)
T PRK00536        148 EPDIHKIDGLKRMLKEDGVFISVA  171 (262)
T ss_pred             CCChHHHHHHHHhcCCCcEEEECC
Confidence            54444 778889999999998654

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.48  E-value=0.68  Score=39.77  Aligned_cols=95  Identities=17%  Similarity=0.139  Sum_probs=65.8

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||.....+..+ +..++.    -.|++|+|.|.+..+|.-.+.++...|++|+..-+. +.+..              
T Consensus       143 ~~PcTp~av~~ll-~~~~i~----l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~--------------  203 (287)
T PRK14176        143 LVPCTPHGVIRAL-EEYGVD----IEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKK--------------  203 (287)
T ss_pred             CCCCcHHHHHHHH-HHcCCC----CCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHH--------------
Confidence            4465554555455 444552    389999999988889999999999999988765532 22210              


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                          .   +  +..|+++.++|-+.+- -.+.++++..++++|..
T Consensus       204 ----~---~--~~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin  238 (287)
T PRK14176        204 ----Y---T--LDADILVVATGVKHLI-KADMVKEGAVIFDVGIT  238 (287)
T ss_pred             ----H---H--hhCCEEEEccCCcccc-CHHHcCCCcEEEEeccc
Confidence                0   0  3478999999876632 34588888899999864

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=94.47  E-value=0.11  Score=44.09  Aligned_cols=77  Identities=16%  Similarity=0.110  Sum_probs=47.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      .++++||+|++|++|...++.+...|++|+.++++ ++.+ ..+.++... .+  |-.+.+  ....+..  .-..+|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46789999999999999999988889999988865 3333 333443221 12  222211  1111110  11358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            998873

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.41  E-value=0.083  Score=43.86  Aligned_cols=72  Identities=19%  Similarity=0.258  Sum_probs=45.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-EeCCCCC--cccccCCCCCcccEEEeCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-LDYKTPD--GAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~~~~~~~--~~~~~~~~~~~~d~v~d~~g  228 (327)
                      +++|+||++++|.+.++.+...|++|+.+.+. ++.+ ..+.++...+ .|-.+.+  .+..+... ..+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence            48999999999999999888889999988754 3433 2344443322 2222221  11121111 25899999875

>PRK06482 short chain dehydrogenase; Provisional

Probab=94.37  E-value=0.12  Score=44.34  Aligned_cols=75  Identities=23%  Similarity=0.198  Sum_probs=46.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-hcCCC-EE--EeCCCCC--cccccC--CCCCcccEEEe
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-SLGAD-EV--LDYKTPD--GAALKS--PSGRKYDAVIN  225 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~lg~~-~v--~~~~~~~--~~~~~~--~~~~~~d~v~d  225 (327)
                      +++||+||+|++|...++.+...|++|+++.++ ++.+.++ ..+.. ..  .|..+.+  ...+..  ....++|++|+
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            469999999999999998888889999988865 3444332 22322 11  2222221  111110  11245899999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      +.|.
T Consensus        83 ~ag~   86 (276)
T PRK06482         83 NAGY   86 (276)
T ss_pred             CCCC
Confidence            9874

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=94.29  E-value=0.42  Score=39.14  Aligned_cols=90  Identities=19%  Similarity=0.089  Sum_probs=56.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHH----HHHhcCCC---EEEeCCCCCcccccCCCCCccc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIE----LVKSLGAD---EVLDYKTPDGAALKSPSGRKYD  221 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~----~~~~lg~~---~v~~~~~~~~~~~~~~~~~~~d  221 (327)
                      +++++||-.|  .|.|..+..+++..+  .+|++++.. +-.+    .++..+..   .++..+..  ....  ....||
T Consensus        71 ~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~--~~~~--~~~~fD  144 (205)
T PRK13944         71 RPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGK--RGLE--KHAPFD  144 (205)
T ss_pred             CCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcc--cCCc--cCCCcc
Confidence            7889999998  356888888888764  589999854 3222    22344432   22222211  1111  124699


Q ss_pred             EEEeCCCCCc-ccccccccCCCcEEEe
Q 020314          222 AVINCVTGIP-WSTFEPNLGTTGKVID  247 (327)
Q Consensus       222 ~v~d~~g~~~-~~~~~~~l~~~G~~v~  247 (327)
                      .|+-+..... .....+.|+++|+++.
T Consensus       145 ~Ii~~~~~~~~~~~l~~~L~~gG~lvi  171 (205)
T PRK13944        145 AIIVTAAASTIPSALVRQLKDGGVLVI  171 (205)
T ss_pred             EEEEccCcchhhHHHHHhcCcCcEEEE
Confidence            9987655433 5577789999999875

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.28  E-value=0.18  Score=42.47  Aligned_cols=34  Identities=15%  Similarity=0.217  Sum_probs=29.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .++++||+||+|++|...+..+...|++|+...+
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~   37 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH   37 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence            4568999999999999999988888999887653

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=94.28  E-value=0.13  Score=47.93  Aligned_cols=76  Identities=18%  Similarity=0.197  Sum_probs=51.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC----------------------cHHHHHhcCCCEEEeCCCC-C
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR----------------------NIELVKSLGADEVLDYKTP-D  208 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~----------------------~~~~~~~lg~~~v~~~~~~-~  208 (327)
                      ..+++|+|.| +|+.|+.++..++..|.+|+......                      ..++++++|.+..++..-. +
T Consensus       139 ~~~~~V~IIG-~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  217 (467)
T TIGR01318       139 PTGKRVAVIG-AGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRD  217 (467)
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCc
Confidence            3678999999 79999999999999999988776321                      2356678887655443211 1


Q ss_pred             cccccCCCCCcccEEEeCCCCC
Q 020314          209 GAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       209 ~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      .......  ..+|.+|.++|..
T Consensus       218 ~~~~~~~--~~~D~vilAtGa~  237 (467)
T TIGR01318       218 ISLDDLL--EDYDAVFLGVGTY  237 (467)
T ss_pred             cCHHHHH--hcCCEEEEEeCCC
Confidence            0100101  3599999999964

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=94.24  E-value=0.071  Score=45.19  Aligned_cols=73  Identities=8%  Similarity=-0.045  Sum_probs=46.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|||.||+|- |..++..+...|.+|++++.+ ...+.+...|...+....-............++|+|+|++..
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence            5999998776 988887777789999988854 455555555544444222111222233344678888888764

This enzyme was found to be a monomer by gel filtration.

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.23  E-value=0.12  Score=44.30  Aligned_cols=76  Identities=24%  Similarity=0.156  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCC-EEE--eCCCCC--cccccC--CCCCcccEEE
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGAD-EVL--DYKTPD--GAALKS--PSGRKYDAVI  224 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~-~v~--~~~~~~--~~~~~~--~~~~~~d~v~  224 (327)
                      +.++||+||+|++|..+++.+...|.+|+.++++ ++.+.. +.++.. ..+  |..+..  ......  ..-.++|.++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4579999999999999998888889999988865 333322 333322 122  222211  011110  0113589999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.|.
T Consensus        83 ~~ag~   87 (275)
T PRK08263         83 NNAGY   87 (275)
T ss_pred             ECCCC
Confidence            99984

>PRK07832 short chain dehydrogenase; Provisional

Probab=94.23  E-value=0.18  Score=43.26  Aligned_cols=32  Identities=13%  Similarity=0.085  Sum_probs=28.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++|+||+|++|..+++.+...|++|+.+.++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~   33 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRD   33 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            58999999999999999888899998887754

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.22  E-value=0.62  Score=40.01  Aligned_cols=96  Identities=20%  Similarity=0.193  Sum_probs=65.8

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........| +..++.    -.|++|+|.|.+..+|.-+..++...++.|+...+. ..++  +            
T Consensus       137 ~~PcTp~av~~lL-~~~~i~----l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~--~------------  197 (284)
T PRK14190        137 FLPCTPHGILELL-KEYNID----ISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLA--E------------  197 (284)
T ss_pred             CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHH--H------------
Confidence            3455544444444 455553    489999999999999999999999999988864322 1111  0            


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                          ..     +..|+++-++|.+.+ --.+.++++..++++|...
T Consensus       198 ----~~-----~~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~~  233 (284)
T PRK14190        198 ----LT-----KQADILIVAVGKPKL-ITADMVKEGAVVIDVGVNR  233 (284)
T ss_pred             ----HH-----HhCCEEEEecCCCCc-CCHHHcCCCCEEEEeeccc
Confidence                00     347889988887663 3345778898999998653

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.22  E-value=0.17  Score=44.32  Aligned_cols=34  Identities=15%  Similarity=0.002  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      ++++++|+||++++|...++.+...|++|+..++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~   44 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDV   44 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence            6789999999999999998888888999888774

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.19  E-value=0.19  Score=42.52  Aligned_cols=76  Identities=18%  Similarity=0.149  Sum_probs=46.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-h-cCCCEE-EeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-S-LGADEV-LDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~-lg~~~v-~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .+.+|||+||+|.+|..+++.+...|.+|++..+. ++..... . .+...+ .|..+......+.. +.++|++|.+.|
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~-~~~~d~vi~~~g   94 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAI-GDDSDAVICATG   94 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHh-hcCCCEEEECCC
Confidence            45789999999999999998888789999988865 3322211 1 112211 23322111111211 136899998877


Q ss_pred             C
Q 020314          229 G  229 (327)
Q Consensus       229 ~  229 (327)
                      .
T Consensus        95 ~   95 (251)
T PLN00141         95 F   95 (251)
T ss_pred             C
Confidence            4

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.18  E-value=0.099  Score=38.80  Aligned_cols=91  Identities=20%  Similarity=0.170  Sum_probs=54.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEEe-cCC-c-HHHHHhcC----CCEEEeCCCCCcccccCCCCCcccEEEeCC
Q 020314          156 NILITAASGAVGLYAVQLAKLG-NTHVTATC-GAR-N-IELVKSLG----ADEVLDYKTPDGAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~-~~~-~-~~~~~~lg----~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~  227 (327)
                      +|.|+|++|-+|..+++++... .++++.+. ++. . ..+...++    ...+ ...+.+...+     ..+|++|.|+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~Dvvf~a~   74 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDL-SVEDADPEEL-----SDVDVVFLAL   74 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEE-BEEETSGHHH-----TTESEEEE-S
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccce-eEeecchhHh-----hcCCEEEecC
Confidence            5899999999999988888854 56777666 333 1 22333222    1111 1111111111     4699999999


Q ss_pred             CCCc-ccccccccCCCcEEEeecCCc
Q 020314          228 TGIP-WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       228 g~~~-~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      +... .+..-..++.+-++++.+...
T Consensus        75 ~~~~~~~~~~~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   75 PHGASKELAPKLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             CHHHHHHHHHHHHHTTSEEEESSSTT
T ss_pred             chhHHHHHHHHHhhCCcEEEeCCHHH
Confidence            9765 344444567777899887653

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.11  E-value=0.14  Score=43.54  Aligned_cols=77  Identities=19%  Similarity=0.229  Sum_probs=46.1

Q ss_pred             CCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEecC----CcHH-HHHhcCCCEEE--eCCCCC--cccccCC--CCCc
Q 020314          153 QQKNILITAA--SGAVGLYAVQLAKLGNTHVTATCGA----RNIE-LVKSLGADEVL--DYKTPD--GAALKSP--SGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~--~g~~G~~~~~la~~~g~~v~~~~~~----~~~~-~~~~lg~~~v~--~~~~~~--~~~~~~~--~~~~  219 (327)
                      +++++||+||  ++++|.+.++.+...|++|+.+.+.    ++.+ +.++++....+  |-.+.+  .+.++..  .-+.
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            5778999996  5799999988888899999877532    2222 22344432222  222222  1111111  1146


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        85 iD~lvnnAG~   94 (260)
T PRK06997         85 LDGLVHSIGF   94 (260)
T ss_pred             CcEEEEcccc
Confidence            9999999873

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=94.10  E-value=0.12  Score=45.97  Aligned_cols=35  Identities=23%  Similarity=0.232  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+|||+||+|.+|...++.+...|.+|+++++.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~   39 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRR   39 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecc
Confidence            57889999999999999999999899999998753

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.06  E-value=0.23  Score=43.69  Aligned_cols=36  Identities=33%  Similarity=0.373  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ..+++|||+||+|.+|...++.+...|.+|++++++
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRD   38 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            357899999999999999998888889999888754

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.05  E-value=0.13  Score=43.54  Aligned_cols=34  Identities=21%  Similarity=0.196  Sum_probs=29.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++||+||+|++|...+..+...|++|+.++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~   35 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDID   35 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4579999999999999988888889999988854

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.04  E-value=0.13  Score=43.22  Aligned_cols=35  Identities=20%  Similarity=0.147  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.++||+||+|++|..+++.+...|++|++++++
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~   38 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRN   38 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            56789999999999999998888889999999865

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=94.02  E-value=0.15  Score=41.79  Aligned_cols=93  Identities=14%  Similarity=0.176  Sum_probs=59.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .+.+|||+| +|.+|.-=+.++...|++|++++.+.  +.. +....... .+. ...+...   .  ..+++||-++++
T Consensus        11 ~~k~VlvvG-gG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~-~~~-~~~~~~~---~--~~~~lviaAt~d   82 (210)
T COG1648          11 EGKKVLVVG-GGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIK-WIE-REFDAED---L--DDAFLVIAATDD   82 (210)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcc-hhh-cccChhh---h--cCceEEEEeCCC
Confidence            678899999 69999999999999999999988442  332 22332211 111 1111111   1  238899999988


Q ss_pred             Cccc-ccccccCCCcEEEeecCCch
Q 020314          230 IPWS-TFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       230 ~~~~-~~~~~l~~~G~~v~~g~~~~  253 (327)
                      +.++ .........+.++.+...+.
T Consensus        83 ~~ln~~i~~~a~~~~i~vNv~D~p~  107 (210)
T COG1648          83 EELNERIAKAARERRILVNVVDDPE  107 (210)
T ss_pred             HHHHHHHHHHHHHhCCceeccCCcc
Confidence            7744 45556666677777765544

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.02  E-value=0.1  Score=43.57  Aligned_cols=70  Identities=24%  Similarity=0.287  Sum_probs=48.8

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---HHHHHhcCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCC
Q 020314          157 ILITAASGAVGLYAVQLAKLGNTHVTATCGARN---IELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      |+|+||+|.+|...++.+...+.+|.+.+|+.+   ...++..|+..+ .-+-.+ ..+.+..  +|+|.||.+++.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~~~~l~~al--~g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EADYDDPESLVAAL--KGVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT-HHHHHHHH--TTCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ecccCCHHHHHHHH--cCCceEEeecCc
Confidence            789999999999999999988889999998643   344567787644 222222 2222212  479999998883

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=93.98  E-value=0.21  Score=44.01  Aligned_cols=35  Identities=26%  Similarity=0.311  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++|||+||+|.+|..+++.+...|++|++++++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~   38 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRD   38 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcC
Confidence            57889999999999999999888889999887643

>PRK06484 short chain dehydrogenase; Validated

Probab=93.97  E-value=0.14  Score=48.50  Aligned_cols=78  Identities=12%  Similarity=0.132  Sum_probs=50.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHH-HHhcCCCEE---EeCCCCC--cccccCC--CCCcccE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIEL-VKSLGADEV---LDYKTPD--GAALKSP--SGRKYDA  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~-~~~lg~~~v---~~~~~~~--~~~~~~~--~~~~~d~  222 (327)
                      ..++.+||+||++++|.+.++.+...|++|+.+.++ ++.+. .+.++....   .|..+.+  ...++..  .-+.+|+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            467899999999999999998888899999998864 34433 344443321   2322222  1111111  1135899


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus       347 li~nAg~  353 (520)
T PRK06484        347 LVNNAGI  353 (520)
T ss_pred             EEECCCC
Confidence            9999873

>PRK05854 short chain dehydrogenase; Provisional

Probab=93.95  E-value=0.13  Score=45.15  Aligned_cols=35  Identities=20%  Similarity=0.203  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+||++++|.++++.+...|++|+.++++
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~   47 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN   47 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999998888889999998865

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=93.95  E-value=0.39  Score=43.03  Aligned_cols=33  Identities=18%  Similarity=0.180  Sum_probs=27.6

Q ss_pred             CCCCeEEEEcCCChHHHH--HHHHHHhCCCeEEEEe
Q 020314          152 GQQKNILITAASGAVGLY--AVQLAKLGNTHVTATC  185 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~--~~~la~~~g~~v~~~~  185 (327)
                      ..++++||+|+++++|++  .++.+ ..|++++++.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~   73 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVF   73 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEe
Confidence            457899999999999999  55666 8899888776

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=93.94  E-value=0.17  Score=42.40  Aligned_cols=77  Identities=21%  Similarity=0.231  Sum_probs=46.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-EEEeCCCCCc----ccccC--CCCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-EVLDYKTPDG----AALKS--PSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-~v~~~~~~~~----~~~~~--~~~~~~d~v  223 (327)
                      ++.++||+|++|++|..+++.+...|+.|+...+. ++.+ ....++.. ..+..+-.+.    .....  ..-.++|.+
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            56789999999999999998888889988776643 3433 22334432 1222211111    11110  011358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        85 i~~ag~   90 (245)
T PRK12936         85 VNNAGI   90 (245)
T ss_pred             EECCCC
Confidence            999884

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.93  E-value=0.29  Score=41.76  Aligned_cols=35  Identities=17%  Similarity=0.183  Sum_probs=29.4

Q ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+||++  ++|.++++.+...|++|+...++
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~   41 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN   41 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence            567899999875  89999888888889998877654

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=93.92  E-value=0.2  Score=49.04  Aligned_cols=35  Identities=14%  Similarity=0.201  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|.+.++.+...|++|+.++++
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~  447 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN  447 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            57899999999999999998888889999988854

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=93.92  E-value=0.17  Score=43.06  Aligned_cols=35  Identities=20%  Similarity=0.108  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+|+++++|...+..+...|++|+.+.++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~   43 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDIN   43 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            56789999999999999888888889998888754

>PRK06701 short chain dehydrogenase; Provisional

Probab=93.89  E-value=0.21  Score=43.37  Aligned_cols=36  Identities=17%  Similarity=0.101  Sum_probs=31.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -++.++||+|++|++|...++.+...|++|+.+.+.
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~   79 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD   79 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            357889999999999999988888889999888753

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=93.88  E-value=1.4  Score=35.84  Aligned_cols=79  Identities=15%  Similarity=0.136  Sum_probs=50.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      -+|.+++|.| .|.+|..+++.+...|++|++.++. ++.+.+ +.+++. .++..+    +.    ...+|+++-|..+
T Consensus        26 l~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~----l~----~~~~Dv~vp~A~~   95 (200)
T cd01075          26 LEGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPEE----IY----SVDADVFAPCALG   95 (200)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcchh----hc----cccCCEEEecccc
Confidence            3778999999 7999999999999999999977754 444433 455643 223211    11    1248888866654


Q ss_pred             Cc-ccccccccC
Q 020314          230 IP-WSTFEPNLG  240 (327)
Q Consensus       230 ~~-~~~~~~~l~  240 (327)
                      .. -...++.++
T Consensus        96 ~~I~~~~~~~l~  107 (200)
T cd01075          96 GVINDDTIPQLK  107 (200)
T ss_pred             cccCHHHHHHcC
Confidence            33 334445553

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK05650 short chain dehydrogenase; Provisional

Probab=93.87  E-value=0.18  Score=43.07  Aligned_cols=32  Identities=13%  Similarity=0.030  Sum_probs=28.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++|+||+|++|...++.+...|++|+.++++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~   33 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVN   33 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            59999999999999998888889999988854

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=93.86  E-value=0.15  Score=42.99  Aligned_cols=74  Identities=20%  Similarity=0.211  Sum_probs=45.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCCE-EE--eCCCCC--cccccCC--CCCcccEEEeC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGADE-VL--DYKTPD--GAALKSP--SGRKYDAVINC  226 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~~-v~--~~~~~~--~~~~~~~--~~~~~d~v~d~  226 (327)
                      +++|+|++|++|.+.++.+...|++|+.+++. ++.+.+ ..++... .+  |-.+.+  .+.++..  ..+++|.++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            58999999999999999988899999988865 343332 3334321 12  222211  1111110  11358999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            874

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.83  E-value=1.1  Score=38.95  Aligned_cols=94  Identities=19%  Similarity=0.122  Sum_probs=63.6

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc-HHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN-IELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~-~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........| +..++.    -.|++|.|.|.++.+|.-.+.++...|++|++..+..+ .+.              
T Consensus       138 ~~PcTp~aii~lL-~~~~i~----l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e--------------  198 (301)
T PRK14194        138 LTPCTPSGCLRLL-EDTCGD----LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA--------------  198 (301)
T ss_pred             CCCCcHHHHHHHH-HHhCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH--------------
Confidence            4465544455445 444553    48999999997789999999999999999887753321 110              


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCC
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~  251 (327)
                          ..     +..|+|+-++|.+. +...  .++++..+|++|..
T Consensus       199 ----~~-----~~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin  233 (301)
T PRK14194        199 ----LC-----RQADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN  233 (301)
T ss_pred             ----HH-----hcCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence                00     23688888888665 3322  38888888888854

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.83  E-value=1.1  Score=38.41  Aligned_cols=96  Identities=23%  Similarity=0.274  Sum_probs=66.2

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||.....+..| +..++.    -.|++++|.|.+..+|.=+..++...|+.|+..-+. ..+...             
T Consensus       137 ~~PcTp~av~~lL-~~~~i~----l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~-------------  198 (278)
T PRK14172        137 FLPCTPNSVITLI-KSLNID----IEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEV-------------  198 (278)
T ss_pred             CcCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence            3455544555455 444552    489999999999999999999999889888755422 222110             


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                           .     +..|+++-++|.+.+ .-.+.++++..+|++|-..
T Consensus       199 -----~-----~~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin~  233 (278)
T PRK14172        199 -----C-----KKADILVVAIGRPKF-IDEEYVKEGAIVIDVGTSS  233 (278)
T ss_pred             -----H-----hhCCEEEEcCCCcCc-cCHHHcCCCcEEEEeeccc
Confidence                 0     337899999987764 3356788999999998654

>PRK08589 short chain dehydrogenase; Validated

Probab=93.82  E-value=0.15  Score=43.68  Aligned_cols=37  Identities=24%  Similarity=0.124  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN  189 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~  189 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.++++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~   41 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEA   41 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHH
Confidence            5789999999999999999888888999999886543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=93.81  E-value=0.18  Score=42.46  Aligned_cols=36  Identities=17%  Similarity=0.101  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      +++++||+|++|++|...++.+...|++|+.+.+..
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~   42 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF   42 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence            567899999999999999998888899999988544

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=93.80  E-value=0.2  Score=44.83  Aligned_cols=93  Identities=14%  Similarity=0.184  Sum_probs=62.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC--CCeEEEEe-cC--CcH-HHHHhcCCCEEEeCCCCCcc------------------
Q 020314          155 KNILITAASGAVGLYAVQLAKLG--NTHVTATC-GA--RNI-ELVKSLGADEVLDYKTPDGA------------------  210 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~-~~--~~~-~~~~~lg~~~v~~~~~~~~~------------------  210 (327)
                      ++|.|.|++|.+|..+++..+..  ..+|++.+ +.  +++ +.++++++..+...++....                  
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            46999999999999999988765  46888887 33  333 46678888877654432110                  


Q ss_pred             -cccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEe
Q 020314          211 -ALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVID  247 (327)
Q Consensus       211 -~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~  247 (327)
                       ..+......+|+|+++.++.. +...+.+++.+-++++
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence             011112235899999998764 7777788876655544

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=93.79  E-value=0.64  Score=40.19  Aligned_cols=90  Identities=13%  Similarity=-0.011  Sum_probs=51.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH-HHHhcCC----CEEEeCCCCCcccccCCCCCcccEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE-LVKSLGA----DEVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~-~~~~lg~----~~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      .+++|+|.| +|++|.+++..+...|+ +++.+.++ +|.+ +++.++.    ..+...++. ...     -..+|+|++
T Consensus       126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~-~~~-----~~~aDiVIn  198 (284)
T PRK12549        126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDL-AAA-----LAAADGLVH  198 (284)
T ss_pred             cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccch-Hhh-----hCCCCEEEE
Confidence            567899999 79999999999999998 67766655 3433 3343321    122111110 001     134899999


Q ss_pred             CCCCCc-----ccccccccCCCcEEEeec
Q 020314          226 CVTGIP-----WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       226 ~~g~~~-----~~~~~~~l~~~G~~v~~g  249 (327)
                      |++..+     .......+.+...++++-
T Consensus       199 aTp~Gm~~~~~~~~~~~~l~~~~~v~Div  227 (284)
T PRK12549        199 ATPTGMAKHPGLPLPAELLRPGLWVADIV  227 (284)
T ss_pred             CCcCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence            975221     111123455555555554

>PLN02780 ketoreductase/ oxidoreductase

Probab=93.79  E-value=0.13  Score=45.30  Aligned_cols=35  Identities=9%  Similarity=-0.017  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .|++++|+||++++|.+.++.+...|++|+.++++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~   86 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARN   86 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECC
Confidence            58899999999999999888777789999998865

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=93.77  E-value=0.17  Score=45.03  Aligned_cols=33  Identities=24%  Similarity=0.214  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++|||+||+|.+|..+++.+...|.+|+++++.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~   33 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRR   33 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecC
Confidence            369999999999999999998889999998854

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK07062 short chain dehydrogenase; Provisional

Probab=93.75  E-value=0.16  Score=43.19  Aligned_cols=35  Identities=20%  Similarity=0.266  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+||++++|.+.++.+...|++|+.+.++
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~   41 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRD   41 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            57889999999999999999998899999988864

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=93.71  E-value=0.11  Score=45.33  Aligned_cols=73  Identities=16%  Similarity=0.135  Sum_probs=42.1

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCcHHHHHhcCCCEEEe-CCCCC-cccccCCCCCcccEEEeCCCC
Q 020314          157 ILITAASGAVGLYAVQLAKLGNT-HVTATCGARNIELVKSLGADEVLD-YKTPD-GAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~~~~~~~~~lg~~~v~~-~~~~~-~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      |||+||+|.+|..+++.+...|. +|+++.+..+......++...+.+ .+... .+.+....-.++|+|+++.+.
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~   76 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGAC   76 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccc
Confidence            68999999999999999998897 677766443322222222221211 11111 111111011469999998863

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.69  E-value=0.22  Score=41.95  Aligned_cols=34  Identities=12%  Similarity=0.151  Sum_probs=29.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .+.++||+||+|++|...++.+...|++++...+
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~   38 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK   38 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            4678999999999999999888889999877664

>PRK13243 glyoxylate reductase; Reviewed

Probab=93.66  E-value=0.2  Score=44.40  Aligned_cols=88  Identities=22%  Similarity=0.095  Sum_probs=58.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-  231 (327)
                      .|++|.|+| .|.+|...++.++.+|++|++..+..+.......+...    .+ ..+.+     ...|+|+-++.... 
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~----~~-l~ell-----~~aDiV~l~lP~t~~  217 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAEY----RP-LEELL-----RESDFVSLHVPLTKE  217 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEe----cC-HHHHH-----hhCCEEEEeCCCChH
Confidence            688999999 89999999999999999999887543333333444321    11 01111     23688888776321 


Q ss_pred             ----c-cccccccCCCcEEEeecCC
Q 020314          232 ----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 ----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                          + ...++.++++..+|.++..
T Consensus       218 T~~~i~~~~~~~mk~ga~lIN~aRg  242 (333)
T PRK13243        218 TYHMINEERLKLMKPTAILVNTARG  242 (333)
T ss_pred             HhhccCHHHHhcCCCCeEEEECcCc
Confidence                2 2556788888888887644

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=93.65  E-value=1.2  Score=35.84  Aligned_cols=96  Identities=19%  Similarity=0.043  Sum_probs=62.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCC--CC-c-ccccCCCCCcccEEEeCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKT--PD-G-AALKSPSGRKYDAVINCV  227 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~--~~-~-~~~~~~~~~~~d~v~d~~  227 (327)
                      -.|++|+|.|.+..+|.=+..++...|++|+....+.-.... ..+..  -.+..  .+ . .+.+.+  +..|+++-++
T Consensus        60 l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~-~~~~~--~hs~t~~~~~~~~l~~~~--~~ADIVIsAv  134 (197)
T cd01079          60 LYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFT-RGESI--RHEKHHVTDEEAMTLDCL--SQSDVVITGV  134 (197)
T ss_pred             CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccc-ccccc--ccccccccchhhHHHHHh--hhCCEEEEcc
Confidence            489999999999999999999999999999966422111000 00000  00000  01 0 011111  4589999999


Q ss_pred             CCCcccccccccCCCcEEEeecCCc
Q 020314          228 TGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       228 g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      |.+.+.--.+.++++..+|++|...
T Consensus       135 G~~~~~i~~d~ik~GavVIDVGi~~  159 (197)
T cd01079         135 PSPNYKVPTELLKDGAICINFASIK  159 (197)
T ss_pred             CCCCCccCHHHcCCCcEEEEcCCCc
Confidence            9887644577899999999999653

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK06398 aldose dehydrogenase; Validated

Probab=93.65  E-value=0.15  Score=43.34  Aligned_cols=35  Identities=20%  Similarity=0.143  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+|+++++|.+.++.+...|++|+.+.++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~   39 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK   39 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            57889999999999999999999999999988854

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=93.62  E-value=0.15  Score=45.80  Aligned_cols=91  Identities=20%  Similarity=0.173  Sum_probs=56.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcHHHHHhcC---CC-EEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNIELVKSLG---AD-EVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~~~~~~lg---~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .+|||.| +|++|..+++.+.+.| .+|+..+++ ++.+.+....   .. ..+|-.+.+ +..+..  +++|+||++.+
T Consensus         2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~-al~~li--~~~d~VIn~~p   77 (389)
T COG1748           2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVD-ALVALI--KDFDLVINAAP   77 (389)
T ss_pred             CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChH-HHHHHH--hcCCEEEEeCC
Confidence            4699999 5999999999988777 699999976 6666554332   11 223322222 222222  23599999998


Q ss_pred             CCcccccc-cccCCCcEEEeec
Q 020314          229 GIPWSTFE-PNLGTTGKVIDFN  249 (327)
Q Consensus       229 ~~~~~~~~-~~l~~~G~~v~~g  249 (327)
                      ...-..++ .|++.+=.+++..
T Consensus        78 ~~~~~~i~ka~i~~gv~yvDts   99 (389)
T COG1748          78 PFVDLTILKACIKTGVDYVDTS   99 (389)
T ss_pred             chhhHHHHHHHHHhCCCEEEcc
Confidence            76533333 4444444555554

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=93.59  E-value=0.14  Score=40.49  Aligned_cols=98  Identities=16%  Similarity=0.152  Sum_probs=60.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeC-CCC---------------C--cccc-
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDY-KTP---------------D--GAAL-  212 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~-~~~---------------~--~~~~-  212 (327)
                      +..+|+|.| +|.+|+.|+++++.+|++++..+. .++.+..+.++...+... ...               .  ...+ 
T Consensus        19 ~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            446789999 899999999999999999998884 456666677766544321 110               0  0011 


Q ss_pred             cCCCCCcccEEEeC-C--CC--Cc--ccccccccCCCcEEEeecCCch
Q 020314          213 KSPSGRKYDAVINC-V--TG--IP--WSTFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       213 ~~~~~~~~d~v~d~-~--g~--~~--~~~~~~~l~~~G~~v~~g~~~~  253 (327)
                      +..  ..+|+++.+ .  +.  +.  ....++.|+++..++++....+
T Consensus        98 ~~i--~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g  143 (168)
T PF01262_consen   98 EFI--APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG  143 (168)
T ss_dssp             HHH--HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred             HHH--hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence            111  246888852 2  21  11  4467778999999998875443

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.57  E-value=1.3  Score=38.09  Aligned_cols=96  Identities=19%  Similarity=0.246  Sum_probs=67.1

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||.....+..| +..++.    -.|++|+|.|.+..+|.-+..++...|+.|+..-+. ..++..             
T Consensus       138 ~~PcTp~avi~ll-~~y~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~-------------  199 (284)
T PRK14177        138 YLPCTPYGMVLLL-KEYGID----VTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSI-------------  199 (284)
T ss_pred             CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence            3455544444444 444553    489999999999999999999999999988855422 222210             


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                           .     +..|+++-++|.+.+ .-.+.++++..++++|...
T Consensus       200 -----~-----~~ADIvIsAvGk~~~-i~~~~ik~gavVIDvGin~  234 (284)
T PRK14177        200 -----V-----RQADIIVGAVGKPEF-IKADWISEGAVLLDAGYNP  234 (284)
T ss_pred             -----H-----hhCCEEEEeCCCcCc-cCHHHcCCCCEEEEecCcc
Confidence                 0     347899999987764 3367889999999999754

>PRK08219 short chain dehydrogenase; Provisional

Probab=93.56  E-value=0.18  Score=41.59  Aligned_cols=72  Identities=15%  Similarity=0.136  Sum_probs=43.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-hcCCCEEEeCCCCCc----ccccCCCCCcccEEEeCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-SLGADEVLDYKTPDG----AALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~lg~~~v~~~~~~~~----~~~~~~~~~~~d~v~d~~g  228 (327)
                      .++||+||+|.+|...+..+... .+|+++.++ ++.+.+. .+....++..+-.+.    +.....  .++|.++.+.|
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~ag   80 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNAG   80 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            57999999999999888777666 899988865 3333222 221122222221111    111111  26899999988


Q ss_pred             C
Q 020314          229 G  229 (327)
Q Consensus       229 ~  229 (327)
                      .
T Consensus        81 ~   81 (227)
T PRK08219         81 V   81 (227)
T ss_pred             c
Confidence            4

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.56  E-value=0.23  Score=42.20  Aligned_cols=35  Identities=6%  Similarity=0.082  Sum_probs=30.0

Q ss_pred             CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+||+  +++|.++++.+...|++|+.+.+.
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~   42 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAG   42 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCc
Confidence            57889999987  899999998888899999887643

>PRK07985 oxidoreductase; Provisional

Probab=93.55  E-value=0.17  Score=44.03  Aligned_cols=34  Identities=15%  Similarity=0.173  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.+
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~   81 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYL   81 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence            5678999999999999999888889999988764

>PRK09186 flagellin modification protein A; Provisional

Probab=93.55  E-value=0.19  Score=42.49  Aligned_cols=35  Identities=31%  Similarity=0.240  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|++|++|...+..+...|++|+.+.++
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~   37 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADID   37 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecC
Confidence            57889999999999999999998899999988854

>PRK07576 short chain dehydrogenase; Provisional

Probab=93.54  E-value=0.16  Score=43.39  Aligned_cols=35  Identities=14%  Similarity=0.232  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|...++.+...|++|+.+++.
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~   42 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS   42 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            67889999999999999999888899999998854

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=93.53  E-value=0.39  Score=35.06  Aligned_cols=93  Identities=18%  Similarity=0.190  Sum_probs=58.9

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc----
Q 020314          157 ILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP----  231 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----  231 (327)
                      |+|.| .|.+|...++.++..+.++++++.+ ++.+.++..|.. ++..+..+...++..+-..++.++-+++++.    
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~   78 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENLL   78 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHH
T ss_pred             eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHHH
Confidence            57888 6999999999999966688888855 667777777744 5555544444444444456788887777554    


Q ss_pred             ccccccccCCCcEEEeecCC
Q 020314          232 WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 ~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ....++.+.+..+++.....
T Consensus        79 ~~~~~r~~~~~~~ii~~~~~   98 (116)
T PF02254_consen   79 IALLARELNPDIRIIARVND   98 (116)
T ss_dssp             HHHHHHHHTTTSEEEEEESS
T ss_pred             HHHHHHHHCCCCeEEEEECC
Confidence            22233445555666554443

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=93.53  E-value=0.19  Score=42.60  Aligned_cols=36  Identities=17%  Similarity=0.139  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+.+.+
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~   42 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE   42 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence            578899999999999999998888899999887653

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=93.51  E-value=0.094  Score=39.20  Aligned_cols=89  Identities=13%  Similarity=0.192  Sum_probs=55.4

Q ss_pred             EEEEcCCChHHHHHHHHHHhCC--CeEEEEec-C--CcH-HHHHhcCCCEEEeCCCCCcc--------------------
Q 020314          157 ILITAASGAVGLYAVQLAKLGN--THVTATCG-A--RNI-ELVKSLGADEVLDYKTPDGA--------------------  210 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~-~--~~~-~~~~~lg~~~v~~~~~~~~~--------------------  210 (327)
                      |.|.|++|.+|..++++.+...  .+|++.+- +  +++ +.++++.+..+.-.++....                    
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            5789999999999999999887  58888873 2  333 45578888877655432110                    


Q ss_pred             -cccCCCCCcccEEEeCCCCCc-ccccccccCCCcEE
Q 020314          211 -ALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKV  245 (327)
Q Consensus       211 -~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~  245 (327)
                       +.+......+|+++++..+-. +.-.+..++.+-++
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~i  117 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDI  117 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeE
Confidence             111112246888888776654 66666666655443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.39  E-value=0.88  Score=39.33  Aligned_cols=97  Identities=23%  Similarity=0.281  Sum_probs=63.6

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC----CCeEEEEecCCcHHHHHhcCCCEEEe
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG----NTHVTATCGARNIELVKSLGADEVLD  203 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~----g~~v~~~~~~~~~~~~~~lg~~~v~~  203 (327)
                      ..||........| +..++.    -.|++|+|.|.+..+|.=++.++...    ++.|+. |.+...++.+.        
T Consensus       136 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtv-chs~T~~l~~~--------  201 (297)
T PRK14167        136 FKPCTPHGIQKLL-AAAGVD----TEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTV-CHSRTDDLAAK--------  201 (297)
T ss_pred             CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEE-eCCCCCCHHHH--------
Confidence            3455544445445 455553    48999999999999999888888766    676665 43221111100        


Q ss_pred             CCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          204 YKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       204 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                              .     +..|+++-++|-+.+-. .+.++++..+|++|-..
T Consensus       202 --------~-----~~ADIvIsAvGkp~~i~-~~~ik~gaiVIDvGin~  236 (297)
T PRK14167        202 --------T-----RRADIVVAAAGVPELID-GSMLSEGATVIDVGINR  236 (297)
T ss_pred             --------H-----hhCCEEEEccCCcCccC-HHHcCCCCEEEEccccc
Confidence                    0     34789999998766322 37888999999999543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=93.36  E-value=0.17  Score=42.81  Aligned_cols=35  Identities=14%  Similarity=0.148  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|...++.+...|++|+.+.++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~   43 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRD   43 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCC
Confidence            57899999999999999998888889999888765

>TIGR00438 rrmJ cell division protein FtsJ

Probab=93.34  E-value=0.34  Score=39.05  Aligned_cols=94  Identities=14%  Similarity=0.098  Sum_probs=51.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCCcHHHHHhcCCCEE-EeCCCCC--cccccCCCCCcccEEEe-C
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN-THVTATCGARNIELVKSLGADEV-LDYKTPD--GAALKSPSGRKYDAVIN-C  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~~~~~~~~~lg~~~v-~~~~~~~--~~~~~~~~~~~~d~v~d-~  226 (327)
                      +++++||..| +|.-+++.....+..+ .++++++.++.+   +..+...+ .|..+..  ..+.+...+.++|+|+. .
T Consensus        31 ~~g~~VLDiG-~GtG~~~~~l~~~~~~~~~v~~vDis~~~---~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~V~~~~  106 (188)
T TIGR00438        31 KPGDTVLDLG-AAPGGWSQVAVEQVGGKGRVIAVDLQPMK---PIENVDFIRGDFTDEEVLNKIRERVGDDKVDVVMSDA  106 (188)
T ss_pred             CCCCEEEEec-CCCCHHHHHHHHHhCCCceEEEEeccccc---cCCCceEEEeeCCChhHHHHHHHHhCCCCccEEEcCC
Confidence            7899999999 5555544433333333 489999844322   11222211 1222111  11122234557999995 2


Q ss_pred             C----CC-------------CcccccccccCCCcEEEeec
Q 020314          227 V----TG-------------IPWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       227 ~----g~-------------~~~~~~~~~l~~~G~~v~~g  249 (327)
                      .    |.             ..+..+.++|+++|+++...
T Consensus       107 ~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       107 APNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             CCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            2    21             12456678999999998754

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.29  E-value=0.89  Score=39.06  Aligned_cols=95  Identities=23%  Similarity=0.228  Sum_probs=63.9

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........| +..++.    -.|++|.|.|.++.+|.-.+.++...|++|++.-+. +..+               
T Consensus       137 ~~PcTp~avi~lL-~~~~i~----l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~---------------  196 (284)
T PRK14179        137 MIPCTPAGIMEMF-REYNVE----LEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLA---------------  196 (284)
T ss_pred             CcCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHH---------------
Confidence            3455544445445 444553    489999999999999999999999899988865221 1111               


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~  252 (327)
                         +..     +..|+++-++|.+. +..  ..++++..+|++|...
T Consensus       197 ---~~~-----~~ADIVI~avg~~~~v~~--~~ik~GavVIDvgin~  233 (284)
T PRK14179        197 ---EVA-----RKADILVVAIGRGHFVTK--EFVKEGAVVIDVGMNR  233 (284)
T ss_pred             ---HHH-----hhCCEEEEecCccccCCH--HHccCCcEEEEeccee
Confidence               000     34789999898766 332  3588888889888553

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=93.29  E-value=0.37  Score=46.99  Aligned_cols=75  Identities=21%  Similarity=0.220  Sum_probs=49.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC----------------------cHHHHHhcCCCEEEeCCC-CC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR----------------------NIELVKSLGADEVLDYKT-PD  208 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~----------------------~~~~~~~lg~~~v~~~~~-~~  208 (327)
                      ..+++|+|+| +|+.|+.++..+...|.+|+++.+..                      +.+.++++|.+...+..- .+
T Consensus       325 ~~~~~VaIIG-aGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIG-AGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence            3688999999 79999999999999999988887432                      134556777654333211 11


Q ss_pred             cccccCCCCCcccEEEeCCCC
Q 020314          209 GAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       209 ~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      ......  ...+|.+|.++|.
T Consensus       404 i~~~~~--~~~~DavilAtGa  422 (654)
T PRK12769        404 ISLESL--LEDYDAVFVGVGT  422 (654)
T ss_pred             CCHHHH--HhcCCEEEEeCCC
Confidence            110010  1358999998885

>PRK07035 short chain dehydrogenase; Provisional

Probab=93.28  E-value=0.21  Score=42.14  Aligned_cols=35  Identities=26%  Similarity=0.270  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+++|+||+|++|.+.++.+...|++|+.+.+.
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~   41 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRK   41 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56789999999999999999998899999988864

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=93.28  E-value=0.36  Score=42.50  Aligned_cols=95  Identities=15%  Similarity=0.121  Sum_probs=56.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC----CeEEEEecC---CcHHHHHhcCCCE------E------EeCCCCCccccc---
Q 020314          156 NILITAASGAVGLYAVQLAKLGN----THVTATCGA---RNIELVKSLGADE------V------LDYKTPDGAALK---  213 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g----~~v~~~~~~---~~~~~~~~lg~~~------v------~~~~~~~~~~~~---  213 (327)
                      +|.|.|. |.+|..+.+.+...+    .+++++..-   +-++++.++...+      +      +..++.......   
T Consensus         1 ~IaInGf-GrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGF-GRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            3789995 999999999887653    577777532   2334443333210      0      000111111110   


Q ss_pred             --C--CCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCC
Q 020314          214 --S--PSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       214 --~--~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~  251 (327)
                        .  -...++|+||+|+|... .+.+..++..|++.|.++.+
T Consensus        80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP  122 (325)
T TIGR01532        80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP  122 (325)
T ss_pred             hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence              0  02357999999999765 66777788888888877644

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.28  E-value=1.5  Score=37.57  Aligned_cols=96  Identities=18%  Similarity=0.150  Sum_probs=66.0

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........| +..++.    -.|++|+|.|.+..+|.=+..++...|+.|+..-+. ..++..             
T Consensus       135 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~-------------  196 (282)
T PRK14169        135 VVASTPYGIMALL-DAYDID----VAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQL-------------  196 (282)
T ss_pred             CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHH-------------
Confidence            3455544444444 444552    488999999999999999999999889988755322 222110             


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                           .     +..|+++-++|.+.+ --.+.++++..++++|...
T Consensus       197 -----~-----~~ADIvI~AvG~p~~-i~~~~vk~GavVIDvGin~  231 (282)
T PRK14169        197 -----T-----KEADILVVAVGVPHF-IGADAVKPGAVVIDVGISR  231 (282)
T ss_pred             -----H-----hhCCEEEEccCCcCc-cCHHHcCCCcEEEEeeccc
Confidence                 0     337899999987764 3356888999999998653

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=93.27  E-value=0.31  Score=37.62  Aligned_cols=71  Identities=23%  Similarity=0.218  Sum_probs=47.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC--------cccccCCCCCcccEEEeC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD--------GAALKSPSGRKYDAVINC  226 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~--------~~~~~~~~~~~~d~v~d~  226 (327)
                      .+|+|+|+-|.+|.++++..++.++-|.-++-.+..+    .....+++.+...        .+.-..+.++.+|.||+-
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CV   79 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCV   79 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEEEe
Confidence            4699999999999999999999999888776322111    0111233332221        122345677889999987


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|+
T Consensus        80 AGG   82 (236)
T KOG4022|consen   80 AGG   82 (236)
T ss_pred             ecc
Confidence            764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=93.24  E-value=0.21  Score=42.34  Aligned_cols=35  Identities=20%  Similarity=0.237  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.++||+||+|++|...++.+...|++|+.++++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~   45 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARK   45 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            57889999999999999998888899999888864

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=93.23  E-value=0.3  Score=44.04  Aligned_cols=36  Identities=19%  Similarity=0.122  Sum_probs=32.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ..+.+|||+||+|-+|..++..+...|.+|+++++.
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~   54 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWK   54 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEec
Confidence            567899999999999999999999899999999854

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.18  E-value=1.1  Score=38.61  Aligned_cols=95  Identities=22%  Similarity=0.212  Sum_probs=63.3

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........| +..++.    -.|++++|.|.+..+|.=...++...++.|+..-+. ..+...             
T Consensus       138 ~~PcTp~av~~lL-~~y~i~----l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~-------------  199 (288)
T PRK14171        138 FIPCTALGCLAVI-KKYEPN----LTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSI-------------  199 (288)
T ss_pred             CcCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence            3455544444444 555553    479999999999999999999999889888743322 222110             


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                           .     +..|+++-++|.+.+ --.+.++++..++++|-.
T Consensus       200 -----~-----~~ADIvV~AvGkp~~-i~~~~vk~GavVIDvGin  233 (288)
T PRK14171        200 -----T-----SKADIVVAAIGSPLK-LTAEYFNPESIVIDVGIN  233 (288)
T ss_pred             -----H-----hhCCEEEEccCCCCc-cCHHHcCCCCEEEEeecc
Confidence                 0     237888888886541 224678888888888854

>PRK12746 short chain dehydrogenase; Provisional

Probab=93.16  E-value=0.3  Score=41.20  Aligned_cols=33  Identities=21%  Similarity=0.130  Sum_probs=28.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      ++.+++|+|++|++|..+++.+...|++|+...
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~   37 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHY   37 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEc
Confidence            457899999999999999988888899887754

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=93.15  E-value=0.27  Score=46.48  Aligned_cols=86  Identities=19%  Similarity=0.108  Sum_probs=57.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-  231 (327)
                      .|++|.|+| .|.+|...++.++.+|++|++.++....+....++...+ +.    .+.+     ...|+|+-+++... 
T Consensus       139 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~-~l----~ell-----~~aDiV~l~lP~t~~  207 (526)
T PRK13581        139 YGKTLGIIG-LGRIGSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELV-SL----DELL-----ARADFITLHTPLTPE  207 (526)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEE-cH----HHHH-----hhCCEEEEccCCChH
Confidence            688999999 899999999999999999999885433333444554322 11    1111     23677877776321 


Q ss_pred             ----c-cccccccCCCcEEEeec
Q 020314          232 ----W-STFEPNLGTTGKVIDFN  249 (327)
Q Consensus       232 ----~-~~~~~~l~~~G~~v~~g  249 (327)
                          + ...+..++++..+|.++
T Consensus       208 t~~li~~~~l~~mk~ga~lIN~a  230 (526)
T PRK13581        208 TRGLIGAEELAKMKPGVRIINCA  230 (526)
T ss_pred             hhcCcCHHHHhcCCCCeEEEECC
Confidence                2 24566778877777665

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=93.11  E-value=0.24  Score=42.51  Aligned_cols=36  Identities=22%  Similarity=0.159  Sum_probs=33.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -.++.+||+|++.++|.+.+..+...|++|+.+.++
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~   41 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRS   41 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            478899999999999999999999999999999865

>PRK08703 short chain dehydrogenase; Provisional

Probab=93.10  E-value=0.2  Score=41.94  Aligned_cols=35  Identities=23%  Similarity=0.241  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+|++|++|...++.+...|++|+.+++.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~   39 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARH   39 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence            56789999999999999998888899999988865

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=93.10  E-value=0.24  Score=42.04  Aligned_cols=34  Identities=15%  Similarity=0.211  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.+
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~   40 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN   40 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            6789999999999999999888889999887764

>PRK01581 speE spermidine synthase; Validated

Probab=93.07  E-value=0.35  Score=43.00  Aligned_cols=96  Identities=20%  Similarity=0.207  Sum_probs=55.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEe---CCCC-------C-cccccCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLD---YKTP-------D-GAALKSPSGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~---~~~~-------~-~~~~~~~~~~  218 (327)
                      .+.++|||.|  ||.|.++..++++.+. +|+++.- ++-.+.++.+..-.-++   ..++       + ...+.. ...
T Consensus       149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~  225 (374)
T PRK01581        149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSS  225 (374)
T ss_pred             CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCC
Confidence            4567999999  4567777888887654 8888874 45566666421100000   0011       1 111122 235


Q ss_pred             cccEEEeCCCCC------------cccccccccCCCcEEEeecC
Q 020314          219 KYDAVINCVTGI------------PWSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       219 ~~d~v~d~~g~~------------~~~~~~~~l~~~G~~v~~g~  250 (327)
                      .||+||--...+            .+..+.+.|+++|.++.-..
T Consensus       226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~  269 (374)
T PRK01581        226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN  269 (374)
T ss_pred             CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence            699997543322            24566779999999876543

>PRK07856 short chain dehydrogenase; Provisional

Probab=93.07  E-value=0.2  Score=42.34  Aligned_cols=35  Identities=11%  Similarity=0.129  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|...++.+...|++|+.+++.
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~   39 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR   39 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999998888899999988865

>PLN00016 RNA-binding protein; Provisional

Probab=93.07  E-value=0.26  Score=44.55  Aligned_cols=94  Identities=15%  Similarity=0.152  Sum_probs=55.7

Q ss_pred             CCCeEEEE----cCCChHHHHHHHHHHhCCCeEEEEecCC-cHHH-----------HHhcCCCEEEeCCCCCcccccCCC
Q 020314          153 QQKNILIT----AASGAVGLYAVQLAKLGNTHVTATCGAR-NIEL-----------VKSLGADEVLDYKTPDGAALKSPS  216 (327)
Q Consensus       153 ~~~~vlV~----g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~-----------~~~lg~~~v~~~~~~~~~~~~~~~  216 (327)
                      ...+|||+    ||+|-+|..++..+...|.+|+++++.. +...           +...+...+. .+-.+  ......
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~D~~d--~~~~~~  127 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-GDPAD--VKSKVA  127 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-ecHHH--HHhhhc
Confidence            44679999    9999999999988888899999998653 2111           1122332221 11111  111122


Q ss_pred             CCcccEEEeCCCCCc--ccccccccCCC--cEEEeec
Q 020314          217 GRKYDAVINCVTGIP--WSTFEPNLGTT--GKVIDFN  249 (327)
Q Consensus       217 ~~~~d~v~d~~g~~~--~~~~~~~l~~~--G~~v~~g  249 (327)
                      ..++|+|+++.+.+.  ....++.++..  .++|.++
T Consensus       128 ~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~S  164 (378)
T PLN00016        128 GAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCS  164 (378)
T ss_pred             cCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEc
Confidence            357999999987532  33444444433  3777654

>PRK06172 short chain dehydrogenase; Provisional

Probab=93.05  E-value=0.24  Score=41.83  Aligned_cols=35  Identities=14%  Similarity=0.105  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+|++|++|...++.+...|++|+.++++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~   40 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRD   40 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            57889999999999999998888889999988865

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.05  E-value=1.8  Score=37.22  Aligned_cols=96  Identities=20%  Similarity=0.156  Sum_probs=66.9

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||.....+..| +..++.    -.|++|+|.|.+..+|.=++.++...|++|+..-+. ..+...             
T Consensus       137 ~~PcTp~aii~lL-~~y~i~----l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~-------------  198 (282)
T PRK14180        137 LESCTPKGIMTML-REYGIK----TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSH-------------  198 (282)
T ss_pred             cCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHH-------------
Confidence            4565555555555 444442    479999999999999999999999889988655432 222110             


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                           .     +..|+++-++|.+.+ .-.+.++++..++++|...
T Consensus       199 -----~-----k~ADIvIsAvGkp~~-i~~~~vk~gavVIDvGin~  233 (282)
T PRK14180        199 -----T-----TKADILIVAVGKPNF-ITADMVKEGAVVIDVGINH  233 (282)
T ss_pred             -----h-----hhcCEEEEccCCcCc-CCHHHcCCCcEEEEecccc
Confidence                 0     347999999997765 2347888999999998653

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.03  E-value=1.3  Score=37.93  Aligned_cols=95  Identities=18%  Similarity=0.174  Sum_probs=65.0

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~  206 (327)
                      ..|+.....+..| +..++.    -.|.+|+|.|.+..+|.-...++...|++|+...+.. .+.  +.           
T Consensus       131 ~~PcTp~av~~ll-~~~~i~----l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~--~~-----------  192 (279)
T PRK14178        131 FAPCTPNGIMTLL-HEYKIS----IAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLK--AE-----------  192 (279)
T ss_pred             CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHH--HH-----------
Confidence            3455544445445 445553    4889999999888999999999999999888766432 111  10           


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                           .     +..|+++.++|.+.+ -.-+.++++..++++|..
T Consensus       193 -----~-----~~ADIvI~Avgk~~l-v~~~~vk~GavVIDVgi~  226 (279)
T PRK14178        193 -----L-----RQADILVSAAGKAGF-ITPDMVKPGATVIDVGIN  226 (279)
T ss_pred             -----H-----hhCCEEEECCCcccc-cCHHHcCCCcEEEEeecc
Confidence                 0     347899999985542 223457899999999865

>PRK07574 formate dehydrogenase; Provisional

Probab=92.99  E-value=0.47  Score=42.84  Aligned_cols=90  Identities=14%  Similarity=0.121  Sum_probs=60.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      .|.+|.|+| .|.+|...++.++.+|++|++..+.. ..+..+.++....   .+ ..+.+     ...|+|+-+.....
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~---~~-l~ell-----~~aDvV~l~lPlt~  260 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYH---VS-FDSLV-----SVCDVVTIHCPLHP  260 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceec---CC-HHHHh-----hcCCEEEEcCCCCH
Confidence            678899999 89999999999999999999988543 3333344443211   11 01122     34789988887322


Q ss_pred             -----c-cccccccCCCcEEEeecCCc
Q 020314          232 -----W-STFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       232 -----~-~~~~~~l~~~G~~v~~g~~~  252 (327)
                           + ...+..|+++..+|.++...
T Consensus       261 ~T~~li~~~~l~~mk~ga~lIN~aRG~  287 (385)
T PRK07574        261 ETEHLFDADVLSRMKRGSYLVNTARGK  287 (385)
T ss_pred             HHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence                 2 25667889988888887543

>PRK07890 short chain dehydrogenase; Provisional

Probab=92.94  E-value=0.21  Score=42.24  Aligned_cols=35  Identities=11%  Similarity=0.145  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+||++++|...++.+...|++|+.++++
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~   38 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART   38 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence            56789999999999999999888999999988864

>PRK06101 short chain dehydrogenase; Provisional

Probab=92.93  E-value=0.24  Score=41.47  Aligned_cols=39  Identities=18%  Similarity=0.120  Sum_probs=31.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV  193 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~  193 (327)
                      .+++|+||+|++|...++.+...|++|+.++++ ++.+.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~   41 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDEL   41 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            469999999999999888888889999988865 444433

>PRK06487 glycerate dehydrogenase; Provisional

Probab=92.93  E-value=0.19  Score=44.19  Aligned_cols=83  Identities=13%  Similarity=-0.031  Sum_probs=53.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-Cc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-IP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~  231 (327)
                      .|++|.|+| .|.+|...++.++.+|++|++..+..+...     ..    ..+ -.+++     ...|+|..+..- +.
T Consensus       147 ~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~~~~~~-----~~----~~~-l~ell-----~~sDiv~l~lPlt~~  210 (317)
T PRK06487        147 EGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLPGRPAR-----PD----RLP-LDELL-----PQVDALTLHCPLTEH  210 (317)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCCccc-----cc----ccC-HHHHH-----HhCCEEEECCCCChH
Confidence            678999999 899999999999999999998875422110     00    000 01111     225777766652 11


Q ss_pred             -----ccccccccCCCcEEEeecCC
Q 020314          232 -----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -----~~~~~~~l~~~G~~v~~g~~  251 (327)
                           -...++.|+++..+|.++..
T Consensus       211 T~~li~~~~~~~mk~ga~lIN~aRG  235 (317)
T PRK06487        211 TRHLIGARELALMKPGALLINTARG  235 (317)
T ss_pred             HhcCcCHHHHhcCCCCeEEEECCCc
Confidence                 23556788888888877644

>PRK08226 short chain dehydrogenase; Provisional

Probab=92.93  E-value=0.25  Score=41.93  Aligned_cols=36  Identities=17%  Similarity=0.051  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      ++.+++|+|++|++|...++.+...|++|+.+.+++
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~   40 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISP   40 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH
Confidence            567899999999999999998888899998888653

>PLN02928 oxidoreductase family protein

Probab=92.92  E-value=0.58  Score=41.74  Aligned_cols=93  Identities=18%  Similarity=0.172  Sum_probs=59.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcC--C---CEEEeC--CCCC-cccccCCCCCcccEEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLG--A---DEVLDY--KTPD-GAALKSPSGRKYDAVI  224 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg--~---~~v~~~--~~~~-~~~~~~~~~~~~d~v~  224 (327)
                      .|+++.|+| .|.+|..+++.++.+|++|++..+..+.+....++  .   ....+.  ...+ .+.+     ...|+|+
T Consensus       158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell-----~~aDiVv  231 (347)
T PLN02928        158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFA-----GEADIVV  231 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHH-----hhCCEEE
Confidence            688999999 89999999999999999999987542222111111  0   000100  0001 1122     2379999


Q ss_pred             eCCCCC-----c-ccccccccCCCcEEEeecCC
Q 020314          225 NCVTGI-----P-WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       225 d~~g~~-----~-~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .+....     . -...+..|+++..+|.++..
T Consensus       232 l~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG  264 (347)
T PLN02928        232 LCCTLTKETAGIVNDEFLSSMKKGALLVNIARG  264 (347)
T ss_pred             ECCCCChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence            887632     1 23666799999999988754

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.91  E-value=1.8  Score=37.33  Aligned_cols=96  Identities=18%  Similarity=0.193  Sum_probs=65.8

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........| +..++.    -.|++|+|.|.+..+|.=+..++...++.|+..-+. ..++..             
T Consensus       134 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~-------------  195 (287)
T PRK14173        134 LEPCTPAGVVRLL-KHYGIP----LAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAV-------------  195 (287)
T ss_pred             CCCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence            3455544444444 455552    379999999999999999999999889988755432 222110             


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                           .     +..|+++-++|.+.+- --+.++++..++++|...
T Consensus       196 -----~-----~~ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin~  230 (287)
T PRK14173        196 -----T-----RRADVLVVAVGRPHLI-TPEMVRPGAVVVDVGINR  230 (287)
T ss_pred             -----H-----hhCCEEEEecCCcCcc-CHHHcCCCCEEEEccCcc
Confidence                 0     2378899888876643 356788888999998653

>PRK08303 short chain dehydrogenase; Provisional

Probab=92.90  E-value=0.21  Score=43.74  Aligned_cols=35  Identities=17%  Similarity=0.076  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+||++++|.++++.+...|++|+.+++.
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            57889999999999999999988899999988753

>PLN02214 cinnamoyl-CoA reductase

Probab=92.89  E-value=0.37  Score=42.88  Aligned_cols=36  Identities=19%  Similarity=0.230  Sum_probs=31.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++.+|||+||+|.+|...++.+...|.+|+++++.
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~   43 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRN   43 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence            356789999999999999999888889999998864

>PRK06128 oxidoreductase; Provisional

Probab=92.88  E-value=0.26  Score=42.93  Aligned_cols=34  Identities=18%  Similarity=0.158  Sum_probs=30.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .++++||+||++++|.++++.+...|++|+.+.+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~   87 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYL   87 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence            5678999999999999999888889999887764

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.88  E-value=1.9  Score=37.04  Aligned_cols=96  Identities=18%  Similarity=0.193  Sum_probs=66.2

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||.....+..| +..++.    -.|++|+|.|.+..+|.=+..++...++.|+..-+. ..++..             
T Consensus       136 ~~PcTp~avi~lL-~~y~i~----l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~-------------  197 (282)
T PRK14166        136 FLPCTPLGVMKLL-KAYEID----LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLY-------------  197 (282)
T ss_pred             CcCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence            4565554555455 444552    489999999999999999999999889888854322 222110             


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                           .     +..|+++-++|.+.+ --.+.++++..++++|-..
T Consensus       198 -----~-----~~ADIvIsAvGkp~~-i~~~~vk~GavVIDvGin~  232 (282)
T PRK14166        198 -----T-----RQADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR  232 (282)
T ss_pred             -----H-----hhCCEEEEcCCCcCc-cCHHHcCCCCEEEEecccc
Confidence                 0     347899999987764 3345788999999998543

>PRK06125 short chain dehydrogenase; Provisional

Probab=92.87  E-value=0.26  Score=41.85  Aligned_cols=35  Identities=26%  Similarity=0.291  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+|+++++|...++.+...|++|+.+.++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~   40 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD   40 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            57899999999999999998888889999988864

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=92.87  E-value=0.4  Score=42.87  Aligned_cols=36  Identities=25%  Similarity=0.267  Sum_probs=31.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ..+.+|||+||+|.+|..+++.+...|.+|+++.+.
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~   43 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRD   43 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            356789999999999999999888889999988754

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.86  E-value=1.8  Score=37.43  Aligned_cols=96  Identities=19%  Similarity=0.138  Sum_probs=66.1

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........| +..++.    -.|++|+|.|.+..+|.=...++...+++|+..-+. ..+...             
T Consensus       139 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~-------------  200 (294)
T PRK14187        139 LIPCTPKGCLYLI-KTITRN----LSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADY-------------  200 (294)
T ss_pred             ccCcCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHH-------------
Confidence            3455544445455 444553    489999999999999999999999999988855432 222110             


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                           .     +..|+++-++|.+.+ --.+.++++..+|++|-..
T Consensus       201 -----~-----~~ADIvVsAvGkp~~-i~~~~ik~gaiVIDVGin~  235 (294)
T PRK14187        201 -----C-----SKADILVAAVGIPNF-VKYSWIKKGAIVIDVGINS  235 (294)
T ss_pred             -----H-----hhCCEEEEccCCcCc-cCHHHcCCCCEEEEecccc
Confidence                 0     347899999987664 3346788888889998543

>PRK06114 short chain dehydrogenase; Provisional

Probab=92.85  E-value=0.32  Score=41.14  Aligned_cols=35  Identities=11%  Similarity=0.008  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+|+++++|.++++.+...|++|+.+.++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~   41 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLR   41 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57789999999999999999888899999988854

>PRK05876 short chain dehydrogenase; Provisional

Probab=92.84  E-value=0.22  Score=42.82  Aligned_cols=35  Identities=14%  Similarity=0.082  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|++|++|.+.++.+...|++|+.+.++
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~   39 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVD   39 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999888899998888754

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=92.84  E-value=0.33  Score=42.49  Aligned_cols=91  Identities=15%  Similarity=0.191  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNT--HVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      ..+|.|+| .|.+|.+.+..++..|.  +|++..++ ++.+.+++.|....... + ..+..     ...|+|+.|+...
T Consensus         6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~-~-~~~~~-----~~aDvViiavp~~   77 (307)
T PRK07502          6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTT-S-AAEAV-----KGADLVILCVPVG   77 (307)
T ss_pred             CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecC-C-HHHHh-----cCCCEEEECCCHH
Confidence            35799999 89999999888887774  77777754 56666667765321111 1 11111     3589999999864


Q ss_pred             c----ccccccccCCCcEEEeecCCc
Q 020314          231 P----WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       231 ~----~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .    +......++++..+++++...
T Consensus        78 ~~~~v~~~l~~~l~~~~iv~dvgs~k  103 (307)
T PRK07502         78 ASGAVAAEIAPHLKPGAIVTDVGSVK  103 (307)
T ss_pred             HHHHHHHHHHhhCCCCCEEEeCccch
Confidence            4    233334567777777776543

>PLN02366 spermidine synthase

Probab=92.80  E-value=0.32  Score=42.54  Aligned_cols=96  Identities=20%  Similarity=0.184  Sum_probs=53.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCC--EEEeCCC-----CC-cccccCCCCCccc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGAD--EVLDYKT-----PD-GAALKSPSGRKYD  221 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~--~v~~~~~-----~~-~~~~~~~~~~~~d  221 (327)
                      .+.++||+.|+ | -|.++..++++.+. +|+++.-+ +-.+.+++.-..  ..++...     .+ ...++...++.+|
T Consensus        90 ~~pkrVLiIGg-G-~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD  167 (308)
T PLN02366         90 PNPKKVLVVGG-G-DGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD  167 (308)
T ss_pred             CCCCeEEEEcC-C-ccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence            56789999994 3 36677888888765 77777743 334444432110  0010000     01 1112222245799


Q ss_pred             EEEeCCCCC-----------cccccccccCCCcEEEeec
Q 020314          222 AVINCVTGI-----------PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       222 ~v~d~~g~~-----------~~~~~~~~l~~~G~~v~~g  249 (327)
                      +|+--...+           .++.+.++|+++|.++.-+
T Consensus       168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~  206 (308)
T PLN02366        168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA  206 (308)
T ss_pred             EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence            998533321           1556678999999997543

>PRK08655 prephenate dehydrogenase; Provisional

Probab=92.79  E-value=0.27  Score=45.39  Aligned_cols=86  Identities=21%  Similarity=0.256  Sum_probs=55.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-Cc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc--
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP--  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--  231 (327)
                      +|.|.||.|.+|.+.+..++..|.+|++..++ ++ .+.+..+|....   .+ .....     ...|+|+-|+....  
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~---~~-~~e~~-----~~aDvVIlavp~~~~~   72 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYA---ND-NIDAA-----KDADIVIISVPINVTE   72 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeec---cC-HHHHh-----ccCCEEEEecCHHHHH
Confidence            48899988999999999999999998888854 33 245566665311   11 01111     24688888887543  


Q ss_pred             --ccccccccCCCcEEEeecC
Q 020314          232 --WSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       232 --~~~~~~~l~~~G~~v~~g~  250 (327)
                        +......++++..+++++.
T Consensus        73 ~vl~~l~~~l~~~~iViDvsS   93 (437)
T PRK08655         73 DVIKEVAPHVKEGSLLMDVTS   93 (437)
T ss_pred             HHHHHHHhhCCCCCEEEEccc
Confidence              3333445666677777765

>PRK14967 putative methyltransferase; Provisional

Probab=92.77  E-value=0.35  Score=40.14  Aligned_cols=68  Identities=26%  Similarity=0.271  Sum_probs=40.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHH----HhcCCC-EEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELV----KSLGAD-EVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~----~~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      +++++||-.| +|. |..++.+++. ++ ++++++.+ +..+.+    +..+.. .+++.+-  ...   .....||+|+
T Consensus        35 ~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~--~~~---~~~~~fD~Vi  106 (223)
T PRK14967         35 GPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDW--ARA---VEFRPFDVVV  106 (223)
T ss_pred             CCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECch--hhh---ccCCCeeEEE
Confidence            6788999998 554 8888888875 55 89888844 434333    233332 2222111  111   1235699999


Q ss_pred             eCC
Q 020314          225 NCV  227 (327)
Q Consensus       225 d~~  227 (327)
                      .+.
T Consensus       107 ~np  109 (223)
T PRK14967        107 SNP  109 (223)
T ss_pred             ECC
Confidence            754

>PRK08317 hypothetical protein; Provisional

Probab=92.76  E-value=0.48  Score=39.46  Aligned_cols=99  Identities=20%  Similarity=0.201  Sum_probs=58.7

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHHHHhc---CCCEEEeCCCCCcccccCC
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIELVKSL---GADEVLDYKTPDGAALKSP  215 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~~~~l---g~~~v~~~~~~~~~~~~~~  215 (327)
                      +..++     +++++||-.| +| .|..+..+++..+  .++++++.+ +..+.+++.   ....+ .....+..... .
T Consensus        13 ~~~~~-----~~~~~vLdiG-~G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~-~~~~~d~~~~~-~   83 (241)
T PRK08317         13 ELLAV-----QPGDRVLDVG-CG-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNV-EFVRGDADGLP-F   83 (241)
T ss_pred             HHcCC-----CCCCEEEEeC-CC-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCce-EEEecccccCC-C
Confidence            44555     7889999999 44 3888889988763  589998844 445555433   11111 11111111111 1


Q ss_pred             CCCcccEEEeCC-----CCC--cccccccccCCCcEEEeec
Q 020314          216 SGRKYDAVINCV-----TGI--PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       216 ~~~~~d~v~d~~-----g~~--~~~~~~~~l~~~G~~v~~g  249 (327)
                      ....+|+|+...     ...  .+..+.++|+++|.++...
T Consensus        84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            224689887532     221  2677888999999998654

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.74  E-value=1.9  Score=36.98  Aligned_cols=96  Identities=18%  Similarity=0.200  Sum_probs=66.0

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........| +..++.    -.|++|+|.|.+..+|.=...++...+++|+..-+. ..++.              
T Consensus       136 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~--------------  196 (284)
T PRK14170        136 FVPCTPAGIIELI-KSTGTQ----IEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQ--------------  196 (284)
T ss_pred             CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH--------------
Confidence            3465554445445 455553    479999999999999999999999889888755322 22210              


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                          ..     +..|+++-++|.+.+ ---+.++++..++++|...
T Consensus       197 ----~~-----~~ADIvI~AvG~~~~-i~~~~vk~GavVIDvGin~  232 (284)
T PRK14170        197 ----VA-----KEADILVVATGLAKF-VKKDYIKPGAIVIDVGMDR  232 (284)
T ss_pred             ----HH-----hhCCEEEEecCCcCc-cCHHHcCCCCEEEEccCcc
Confidence                00     337899988887664 3356788888999998653

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=92.73  E-value=0.15  Score=41.45  Aligned_cols=91  Identities=16%  Similarity=0.048  Sum_probs=52.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH----HhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      .++.+||-.|+  |.|..+..+++. |.+|++++.+ +-.+.+    +..+...+ .....+.....  -...||+|+.+
T Consensus        29 ~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~~~~~--~~~~fD~I~~~  102 (197)
T PRK11207         29 VKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDLNNLT--FDGEYDFILST  102 (197)
T ss_pred             CCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecChhhCC--cCCCcCEEEEe
Confidence            56678999983  447778888875 7899999843 333332    23232211 11101111111  12459999875


Q ss_pred             CCC---------CcccccccccCCCcEEEee
Q 020314          227 VTG---------IPWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       227 ~g~---------~~~~~~~~~l~~~G~~v~~  248 (327)
                      ..-         ..+..+.+.|+++|.++.+
T Consensus       103 ~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~  133 (197)
T PRK11207        103 VVLMFLEAKTIPGLIANMQRCTKPGGYNLIV  133 (197)
T ss_pred             cchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            431         1255677799999996544

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=92.69  E-value=0.13  Score=38.42  Aligned_cols=78  Identities=22%  Similarity=0.246  Sum_probs=46.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-C-CcHHHH-HhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCG-A-RNIELV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~-~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      --+|-|.| +|.+|..+...++..|.+|..+.+ + ++.+.+ ..++...+.+..+    ..     ...|++|=++.++
T Consensus        10 ~l~I~iIG-aGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~----~~-----~~aDlv~iavpDd   79 (127)
T PF10727_consen   10 RLKIGIIG-AGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE----IL-----RDADLVFIAVPDD   79 (127)
T ss_dssp             --EEEEEC-TSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG----GG-----CC-SEEEE-S-CC
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc----cc-----ccCCEEEEEechH
Confidence            34689999 799999999999999999988863 3 344444 3445444333211    11     3489999999988


Q ss_pred             cccccccccCC
Q 020314          231 PWSTFEPNLGT  241 (327)
Q Consensus       231 ~~~~~~~~l~~  241 (327)
                      .+....+.|..
T Consensus        80 aI~~va~~La~   90 (127)
T PF10727_consen   80 AIAEVAEQLAQ   90 (127)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHHH
Confidence            77766655543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK08643 acetoin reductase; Validated

Probab=92.68  E-value=0.29  Score=41.39  Aligned_cols=34  Identities=18%  Similarity=0.098  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++||+|++|++|...++.+...|++|+.++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~   35 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN   35 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4679999999999999999888899999988854

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.67  E-value=1.4  Score=37.96  Aligned_cols=96  Identities=20%  Similarity=0.216  Sum_probs=64.2

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC----CCeEEEEecC-CcHHHHHhcCCCEEE
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG----NTHVTATCGA-RNIELVKSLGADEVL  202 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~----g~~v~~~~~~-~~~~~~~~lg~~~v~  202 (327)
                      ..||.....+..| +..++.    -.|++|+|.|.+..+|.=...++...    ++.|+..-+. ..++.          
T Consensus       132 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~----------  196 (287)
T PRK14181        132 FIPCTPAGIIELL-KYYEIP----LHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTE----------  196 (287)
T ss_pred             CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHH----------
Confidence            4565555555455 455553    47999999999999999888888877    6666643221 11110          


Q ss_pred             eCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          203 DYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                              ..     +..|+++-++|.+.+ --.+.++++..++++|...
T Consensus       197 --------~~-----~~ADIvV~AvG~p~~-i~~~~ik~GavVIDvGin~  232 (287)
T PRK14181        197 --------IL-----KTADIIIAAIGVPLF-IKEEMIAEKAVIVDVGTSR  232 (287)
T ss_pred             --------HH-----hhCCEEEEccCCcCc-cCHHHcCCCCEEEEecccc
Confidence                    00     347899999987653 3356888999999998653

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=92.64  E-value=0.43  Score=40.54  Aligned_cols=33  Identities=15%  Similarity=0.144  Sum_probs=28.6

Q ss_pred             CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEe
Q 020314          153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      .+++++|+||+  +++|.+.++.+...|++|+.+.
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~   39 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITY   39 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEe
Confidence            57889999975  7999999988888999988775

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=92.64  E-value=0.18  Score=45.46  Aligned_cols=95  Identities=21%  Similarity=0.217  Sum_probs=54.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcc
Q 020314          155 KNILITAASGAVGLYAVQLAKLG-NTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW  232 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~  232 (327)
                      .+|.|.||+|-+|...++++..+ ..++..+.+.+ ..+....... .+...+.......+...-.++|+||-+.+....
T Consensus        39 ~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~-~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~s  117 (381)
T PLN02968         39 KRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFP-HLITQDLPNLVAVKDADFSDVDAVFCCLPHGTT  117 (381)
T ss_pred             cEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCc-cccCccccceecCCHHHhcCCCEEEEcCCHHHH
Confidence            47999999999999999998876 56888877532 1111111111 011101000000110001358999999987665


Q ss_pred             cccccccCCCcEEEeecC
Q 020314          233 STFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       233 ~~~~~~l~~~G~~v~~g~  250 (327)
                      ......+..+-++|+++.
T Consensus       118 ~~i~~~~~~g~~VIDlSs  135 (381)
T PLN02968        118 QEIIKALPKDLKIVDLSA  135 (381)
T ss_pred             HHHHHHHhCCCEEEEcCc
Confidence            555555566667888763

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=92.63  E-value=0.24  Score=41.82  Aligned_cols=35  Identities=20%  Similarity=0.162  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+.
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~   42 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDIT   42 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCC
Confidence            57789999999999999998888889999988864

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.62  E-value=0.43  Score=44.28  Aligned_cols=70  Identities=20%  Similarity=0.207  Sum_probs=46.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cH----HHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NI----ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~----~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      .+++|+|+| .|.+|+.+++.+...|++|++++...  ..    +.+.++|.. ++..+..+ .     ..+++|+|+.+
T Consensus         4 ~~k~v~iiG-~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~~~-~-----~~~~~d~vv~~   75 (450)
T PRK14106          4 KGKKVLVVG-AGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIE-LVLGEYPE-E-----FLEGVDLVVVS   75 (450)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCcch-h-----HhhcCCEEEEC
Confidence            578899999 56699999999999999999888542  22    223344544 22111111 1     11358999999


Q ss_pred             CCCC
Q 020314          227 VTGI  230 (327)
Q Consensus       227 ~g~~  230 (327)
                      +|..
T Consensus        76 ~g~~   79 (450)
T PRK14106         76 PGVP   79 (450)
T ss_pred             CCCC
Confidence            8853

>PRK09242 tropinone reductase; Provisional

Probab=92.57  E-value=0.3  Score=41.37  Aligned_cols=35  Identities=23%  Similarity=0.138  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+|+++++|...++.+...|++|+.+.++
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~   42 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARD   42 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence            57899999999999999999998899999988864

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=92.57  E-value=0.93  Score=39.27  Aligned_cols=34  Identities=6%  Similarity=0.079  Sum_probs=27.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~  187 (327)
                      ++++++|.| +|+.+.+++..+...|+ +++.+.|+
T Consensus       123 ~~k~vlvlG-aGGaarAi~~~l~~~g~~~i~i~nRt  157 (288)
T PRK12749        123 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRR  157 (288)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence            567899999 68889987777777887 77777765

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=92.54  E-value=0.2  Score=41.57  Aligned_cols=72  Identities=25%  Similarity=0.201  Sum_probs=44.8

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHH-HHH-hcCCCEE-EeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          157 ILITAASGAVGLYAVQLAKLGNTHVTATCGARNIE-LVK-SLGADEV-LDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~-~~~-~lg~~~v-~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      |||+||+|-+|..++..+...|.+|++..+..+.. ... ....... .|..+.+ ...+......+|.||++.+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~-~~~~~~~~~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKE-QLEKLLEKANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHH-HHHHHHHHHTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccc-cccccccccCceEEEEeecc
Confidence            79999999999999999999999999888654333 222 2222111 2222211 11111112258999998885

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=92.54  E-value=0.34  Score=37.84  Aligned_cols=33  Identities=27%  Similarity=0.267  Sum_probs=25.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNT-HVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~  187 (327)
                      ++++|+||++++|...++.+...|+ +|+.+.++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~   34 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRS   34 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeec
Confidence            3699999999999988877777777 55555555

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK10637 cysG siroheme synthase; Provisional

Probab=92.53  E-value=0.78  Score=42.63  Aligned_cols=93  Identities=12%  Similarity=0.068  Sum_probs=56.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      .+.+|||.| .|.++.-=++.+...|++|++++..  +....+...|.-..+. .+.....+     .++++||-+++++
T Consensus        11 ~~~~vlvvG-gG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~-~~~~~~dl-----~~~~lv~~at~d~   83 (457)
T PRK10637         11 RDRDCLLVG-GGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVE-GPFDESLL-----DTCWLAIAATDDD   83 (457)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChHHh-----CCCEEEEECCCCH
Confidence            688999999 6888887677777789999888743  2333232223222221 11111111     3588999999887


Q ss_pred             cccccc-cccCCCcEEEeecCCc
Q 020314          231 PWSTFE-PNLGTTGKVIDFNPSP  252 (327)
Q Consensus       231 ~~~~~~-~~l~~~G~~v~~g~~~  252 (327)
                      .++..+ ...+..|.++.+...+
T Consensus        84 ~~n~~i~~~a~~~~~lvN~~d~~  106 (457)
T PRK10637         84 AVNQRVSEAAEARRIFCNVVDAP  106 (457)
T ss_pred             HHhHHHHHHHHHcCcEEEECCCc
Confidence            755443 4444567777766543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.52  E-value=0.31  Score=41.40  Aligned_cols=35  Identities=20%  Similarity=0.257  Sum_probs=30.4

Q ss_pred             CCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAA--SGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~--~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+|+  ++++|.+.++.+...|++|+.+.++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~   42 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFG   42 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCc
Confidence            5678999998  7999999998888899999888754

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=92.47  E-value=2.2  Score=36.98  Aligned_cols=96  Identities=21%  Similarity=0.205  Sum_probs=65.8

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||.....+..| +..++.    -.|++|+|.|.+..+|.=+..++...|++|+..-+. ..++.              
T Consensus       146 ~~PcTp~avi~lL-~~~~i~----l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~--------------  206 (299)
T PLN02516        146 FLPCTPKGCLELL-SRSGIP----IKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPES--------------  206 (299)
T ss_pred             CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH--------------
Confidence            4566655555555 444553    479999999999999999999999889988766432 22211              


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                          ..     +..|+++-++|.+. -.-.+.++++..++++|...
T Consensus       207 ----~~-----~~ADIvv~AvGk~~-~i~~~~vk~gavVIDvGin~  242 (299)
T PLN02516        207 ----IV-----READIVIAAAGQAM-MIKGDWIKPGAAVIDVGTNA  242 (299)
T ss_pred             ----HH-----hhCCEEEEcCCCcC-ccCHHHcCCCCEEEEeeccc
Confidence                00     34788888888653 22246788898999998653

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=92.47  E-value=0.44  Score=39.44  Aligned_cols=98  Identities=16%  Similarity=0.184  Sum_probs=55.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-------CcH--HHHHhcCCCEE---------EeCC-------C
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-------RNI--ELVKSLGADEV---------LDYK-------T  206 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-------~~~--~~~~~lg~~~v---------~~~~-------~  206 (327)
                      +...|+|.| -||+|.+++..+-..|. ++..++-+       .|+  ++....|..++         +|+.       .
T Consensus        29 ~~~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~  107 (263)
T COG1179          29 KQAHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND  107 (263)
T ss_pred             hhCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence            456799999 89999999999999997 66665421       221  22223332211         1111       0


Q ss_pred             CC-cccccCCCCCcccEEEeCCCCCc--ccccccccCCCcEEEeecCC
Q 020314          207 PD-GAALKSPSGRKYDAVINCVTGIP--WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       207 ~~-~~~~~~~~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .- .+..+..-..++|+|+||.-+-.  ...+..|.+..=.+|..+..
T Consensus       108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Ga  155 (263)
T COG1179         108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGA  155 (263)
T ss_pred             hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccc
Confidence            00 11222233458999999997543  33333455555566666543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=92.45  E-value=0.26  Score=41.42  Aligned_cols=36  Identities=19%  Similarity=0.115  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++.+++|+|++|++|...++.+...|++|+.+++.
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~   45 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRT   45 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence            578899999999999999888888889999988864

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=92.43  E-value=0.057  Score=46.69  Aligned_cols=141  Identities=18%  Similarity=0.136  Sum_probs=73.8

Q ss_pred             CCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHH--HHHHHhhCCccCCCCCCCeEEEEcCCCh
Q 020314           88 FKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAH--QALTQSLGVKLDGSGQQKNILITAASGA  165 (327)
Q Consensus        88 ~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~--~al~~~~~~~~~~~~~~~~vlV~g~~g~  165 (327)
                      +++|+|.+..+   .|.++-.-+...++.+.+++.+=.    ...-+|..  ..|.+.  .     +++++||=.|  .|
T Consensus       108 ~~vg~~~~I~P---~w~~~~~~~~~~~I~idPg~AFGT----G~H~TT~lcl~~l~~~--~-----~~g~~vLDvG--~G  171 (295)
T PF06325_consen  108 IRVGDRLVIVP---SWEEYPEPPDEIVIEIDPGMAFGT----GHHPTTRLCLELLEKY--V-----KPGKRVLDVG--CG  171 (295)
T ss_dssp             EEECTTEEEEE---TT----SSTTSEEEEESTTSSS-S----SHCHHHHHHHHHHHHH--S-----STTSEEEEES---T
T ss_pred             EEECCcEEEEC---CCcccCCCCCcEEEEECCCCcccC----CCCHHHHHHHHHHHHh--c-----cCCCEEEEeC--Cc
Confidence            66788666544   555552234455666666544322    22222222  233223  2     6889999888  34


Q ss_pred             HHHHHHHHHHhCCC-eEEEEec-CCc----HHHHHhcCCC-EEEeCCCCCcccccCCCCCcccEEEeCCCCCc----ccc
Q 020314          166 VGLYAVQLAKLGNT-HVTATCG-ARN----IELVKSLGAD-EVLDYKTPDGAALKSPSGRKYDAVINCVTGIP----WST  234 (327)
Q Consensus       166 ~G~~~~~la~~~g~-~v~~~~~-~~~----~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~----~~~  234 (327)
                      .|.+++..++ +|+ +|++++. +..    ++.++..+.. .+......      ......||+|+-+.-.+.    ...
T Consensus       172 SGILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~------~~~~~~~dlvvANI~~~vL~~l~~~  244 (295)
T PF06325_consen  172 SGILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE------DLVEGKFDLVVANILADVLLELAPD  244 (295)
T ss_dssp             TSHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS------CTCCS-EEEEEEES-HHHHHHHHHH
T ss_pred             HHHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec------ccccccCCEEEECCCHHHHHHHHHH
Confidence            5666666555 477 8999984 422    2222222221 22111111      111267999998776543    445


Q ss_pred             cccccCCCcEEEeecCC
Q 020314          235 FEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       235 ~~~~l~~~G~~v~~g~~  251 (327)
                      ..++++++|.++..|-.
T Consensus       245 ~~~~l~~~G~lIlSGIl  261 (295)
T PF06325_consen  245 IASLLKPGGYLILSGIL  261 (295)
T ss_dssp             CHHHEEEEEEEEEEEEE
T ss_pred             HHHhhCCCCEEEEcccc
Confidence            66789999999987744

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK00811 spermidine synthase; Provisional

Probab=92.42  E-value=0.29  Score=42.32  Aligned_cols=92  Identities=18%  Similarity=0.180  Sum_probs=53.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhc----C--C--C---EEEeCCCCCcccccCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSL----G--A--D---EVLDYKTPDGAALKSPSGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~l----g--~--~---~v~~~~~~~~~~~~~~~~~  218 (327)
                      .+.++||+.|  +|.|..+..++++.+. +|+++.- ++-.+.+++.    +  .  +   .++..+.  ...+.. ..+
T Consensus        75 ~~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da--~~~l~~-~~~  149 (283)
T PRK00811         75 PNPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDG--IKFVAE-TEN  149 (283)
T ss_pred             CCCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECch--HHHHhh-CCC
Confidence            4667899999  3457778888887665 7888874 4444444432    1  1  1   1111111  111221 345


Q ss_pred             cccEEEeCCCCC-----------cccccccccCCCcEEEee
Q 020314          219 KYDAVINCVTGI-----------PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       219 ~~d~v~d~~g~~-----------~~~~~~~~l~~~G~~v~~  248 (327)
                      .+|+|+--...+           .++.+.+.|+++|.++.-
T Consensus       150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            799998543221           135667899999999864

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=92.39  E-value=0.35  Score=42.25  Aligned_cols=31  Identities=10%  Similarity=0.163  Sum_probs=29.0

Q ss_pred             CCCeEEEEcC--CChHHHHHHHHHHhCCCeEEE
Q 020314          153 QQKNILITAA--SGAVGLYAVQLAKLGNTHVTA  183 (327)
Q Consensus       153 ~~~~vlV~g~--~g~~G~~~~~la~~~g~~v~~  183 (327)
                      .|+++||+|+  ++++|.+.++.+...|++|+.
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~   40 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV   40 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE
Confidence            6889999999  799999999999999999988

>PRK12743 oxidoreductase; Provisional

Probab=92.36  E-value=0.37  Score=40.82  Aligned_cols=33  Identities=15%  Similarity=0.161  Sum_probs=29.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      ++++||+||++++|..+++.+...|++|+.+.+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~   34 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWH   34 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            457999999999999999999889999988763

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.32  E-value=0.64  Score=43.56  Aligned_cols=70  Identities=17%  Similarity=0.117  Sum_probs=47.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--c----HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--N----IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~----~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      ..+++|+|.| .|++|+.++.+++..|.+|+++...+  .    .+.+++.|.........   .     ....+|+|+-
T Consensus        14 ~~~~~v~viG-~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~-----~~~~~D~Vv~   84 (480)
T PRK01438         14 WQGLRVVVAG-LGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGP---T-----LPEDTDLVVT   84 (480)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c-----ccCCCCEEEE
Confidence            3567899999 79999999999999999998887332  1    23455667554332211   1     1134899998


Q ss_pred             CCCCC
Q 020314          226 CVTGI  230 (327)
Q Consensus       226 ~~g~~  230 (327)
                      +.|-+
T Consensus        85 s~Gi~   89 (480)
T PRK01438         85 SPGWR   89 (480)
T ss_pred             CCCcC
Confidence            88854

>PRK06914 short chain dehydrogenase; Provisional

Probab=92.25  E-value=0.3  Score=41.95  Aligned_cols=34  Identities=26%  Similarity=0.195  Sum_probs=30.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++||+||+|++|...++.+...|++|++++++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~   36 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRN   36 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCC
Confidence            5679999999999999998888889999998864

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=92.25  E-value=0.46  Score=41.94  Aligned_cols=35  Identities=20%  Similarity=0.227  Sum_probs=28.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~  187 (327)
                      ++.+|||+||+|.+|...++.+...|  .+|++.++.
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~   39 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRD   39 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence            46789999999999999888777665  578877754

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=92.25  E-value=0.28  Score=41.23  Aligned_cols=35  Identities=14%  Similarity=0.086  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+.++||+||+|.+|...+..+...|++|++++++
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~   39 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC   39 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            56789999999999999998888889999998865

>PRK07024 short chain dehydrogenase; Provisional

Probab=92.24  E-value=0.35  Score=40.94  Aligned_cols=34  Identities=15%  Similarity=0.129  Sum_probs=29.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.+++|+||+|++|...++.+...|++|+.+.+.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~   35 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARR   35 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3579999999999999998888889999988854

>PLN00198 anthocyanidin reductase; Provisional

Probab=92.23  E-value=0.56  Score=41.59  Aligned_cols=35  Identities=14%  Similarity=0.156  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+.+|||+||+|-+|...++.+...|++|++++++
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~   42 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRD   42 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECC
Confidence            47789999999999999999888889999887754

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=92.22  E-value=0.34  Score=43.14  Aligned_cols=92  Identities=18%  Similarity=0.038  Sum_probs=53.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-CcH-HHHHhcC-CCEE--EeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLG-NTHVTATCGA-RNI-ELVKSLG-ADEV--LDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~-~~~-~~~~~lg-~~~v--~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      -+|+|.|++|.+|...++++... +.+++++++. ++. .+.+..+ ....  ...++.+.  .   ...++|+||-|++
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~--~---~~~~vD~Vf~alP   77 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDP--E---ILAGADVVFLALP   77 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCH--H---HhcCCCEEEECCC
Confidence            36999999999999888877755 6788887753 221 1222221 0000  01111111  1   1135899999998


Q ss_pred             CCc-ccccccccCCCcEEEeecCC
Q 020314          229 GIP-WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       229 ~~~-~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ... .+.+..+++.+-.+|+.+..
T Consensus        78 ~~~~~~~v~~a~~aG~~VID~S~~  101 (343)
T PRK00436         78 HGVSMDLAPQLLEAGVKVIDLSAD  101 (343)
T ss_pred             cHHHHHHHHHHHhCCCEEEECCcc
Confidence            766 44444555555578887643

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.20  E-value=2.5  Score=36.57  Aligned_cols=96  Identities=15%  Similarity=0.100  Sum_probs=64.7

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........| +..++.    -.|++|+|.|.+..+|.=+..++...|++|+..-+. ..++..             
T Consensus       137 ~~PcTp~aii~lL-~~~~i~----l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~-------------  198 (297)
T PRK14186        137 LRSCTPAGVMRLL-RSQQID----IAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASI-------------  198 (297)
T ss_pred             CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH-------------
Confidence            3455544444444 444552    478999999999999999999999899988765432 222110             


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                           .     +..|+++-++|.+.+ .-.+.++++..+|++|...
T Consensus       199 -----~-----~~ADIvIsAvGkp~~-i~~~~ik~gavVIDvGin~  233 (297)
T PRK14186        199 -----T-----READILVAAAGRPNL-IGAEMVKPGAVVVDVGIHR  233 (297)
T ss_pred             -----H-----hhCCEEEEccCCcCc-cCHHHcCCCCEEEEecccc
Confidence                 0     237888888886653 2256788888888888553

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=92.19  E-value=0.22  Score=42.98  Aligned_cols=66  Identities=24%  Similarity=0.125  Sum_probs=41.9

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          157 ILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      |||+||+|-+|..+++.+...|.+|+++++. .+.......   .+.+....  ......  .++|+||++.+.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~--~~~~~~--~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE---GYKPWAPL--AESEAL--EGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce---eeeccccc--chhhhc--CCCCEEEECCCC
Confidence            6899999999999999888889999999864 332211111   11111111  111111  458999999974

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN03139 formate dehydrogenase; Provisional

Probab=92.18  E-value=0.36  Score=43.52  Aligned_cols=89  Identities=18%  Similarity=0.110  Sum_probs=60.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      .|++|.|+| .|.+|...++.++.+|++|++..+.. ..+..+..|....   .+ -.+.+     ...|+|+.+.....
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~---~~-l~ell-----~~sDvV~l~lPlt~  267 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE---ED-LDAML-----PKCDVVVINTPLTE  267 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec---CC-HHHHH-----hhCCEEEEeCCCCH
Confidence            788999999 89999999999999999998877543 3344444553321   11 01122     23688887776321


Q ss_pred             -----c-cccccccCCCcEEEeecCC
Q 020314          232 -----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                           + ...+..|+++..+|.++..
T Consensus       268 ~T~~li~~~~l~~mk~ga~lIN~aRG  293 (386)
T PLN03139        268 KTRGMFNKERIAKMKKGVLIVNNARG  293 (386)
T ss_pred             HHHHHhCHHHHhhCCCCeEEEECCCC
Confidence                 1 2466788888888887754

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=92.17  E-value=2.2  Score=37.62  Aligned_cols=95  Identities=24%  Similarity=0.232  Sum_probs=65.9

Q ss_pred             cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCC
Q 020314          129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTP  207 (327)
Q Consensus       129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~  207 (327)
                      .||........| +..++.    -.|++++|.|-+..+|.=+..++...++.|+..-+. ..++.               
T Consensus       194 ~PCTp~avi~LL-~~~~i~----l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~---------------  253 (345)
T PLN02897        194 VSCTPKGCVELL-IRSGVE----IAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQ---------------  253 (345)
T ss_pred             cCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHH---------------
Confidence            455544444444 444542    479999999999999999999999889988655432 22211               


Q ss_pred             CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                         ..     +..|+++-++|.+.+ --.+.++++..+|++|-..
T Consensus       254 ---~~-----~~ADIvIsAvGkp~~-v~~d~vk~GavVIDVGin~  289 (345)
T PLN02897        254 ---IT-----RKADIVIAAAGIPNL-VRGSWLKPGAVVIDVGTTP  289 (345)
T ss_pred             ---HH-----hhCCEEEEccCCcCc-cCHHHcCCCCEEEEccccc
Confidence               00     347999999997764 3356889999999999653

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=92.14  E-value=0.32  Score=41.00  Aligned_cols=33  Identities=21%  Similarity=0.226  Sum_probs=29.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++||+|++|++|...+..+...|++|+++++.
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~   34 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLG   34 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence            479999999999999998888889999998865

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=92.12  E-value=0.25  Score=42.56  Aligned_cols=32  Identities=34%  Similarity=0.328  Sum_probs=28.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +|||+||+|.+|..+++.+...|.+|+++++.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~   32 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS   32 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence            48999999999999999998889999988753

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=92.12  E-value=0.33  Score=41.31  Aligned_cols=35  Identities=26%  Similarity=0.237  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+|++|++|.+.++.+...|++|+.+++.
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~   42 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH   42 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            56789999999999999999998899999988754

>PRK06181 short chain dehydrogenase; Provisional

Probab=92.11  E-value=0.3  Score=41.45  Aligned_cols=33  Identities=18%  Similarity=0.184  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++||+||+|++|..+++.+...|++|++++++
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~   34 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARN   34 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            469999999999999999888889999998865

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=92.09  E-value=0.27  Score=43.85  Aligned_cols=47  Identities=26%  Similarity=0.189  Sum_probs=36.8

Q ss_pred             HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      |||.-+.....+      ++.+|||+||+|=+|..++..+...|.+|+++++.
T Consensus         2 ~~~~~~~~~~~~------~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~   48 (348)
T PRK15181          2 TAYEELRTKLVL------APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNF   48 (348)
T ss_pred             chhhhhhhcccc------cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            456555333333      56789999999999999999999889999999853

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=92.09  E-value=0.3  Score=43.34  Aligned_cols=88  Identities=17%  Similarity=0.131  Sum_probs=49.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC---eEEEEecCCc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNT---HVTATCGARN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~---~v~~~~~~~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      -+|+|.||+|-+|...++++...+.   ++.+.++.+. -+...-.+.+..+.  +.+...+     .++|+||.|+|..
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~--d~~~~~~-----~~vDvVf~A~g~g   74 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVE--DLTTFDF-----SGVDIALFSAGGS   74 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEe--eCCHHHH-----cCCCEEEECCChH
Confidence            3699999999999999999987543   5566664321 11111112221221  1110111     3589999999865


Q ss_pred             c-ccccccccCCCcEEEeec
Q 020314          231 P-WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       231 ~-~~~~~~~l~~~G~~v~~g  249 (327)
                      . .+.+-+++..+..+|+++
T Consensus        75 ~s~~~~~~~~~~G~~VIDlS   94 (334)
T PRK14874         75 VSKKYAPKAAAAGAVVIDNS   94 (334)
T ss_pred             HHHHHHHHHHhCCCEEEECC
Confidence            4 333334445555666654

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.08  E-value=2.4  Score=36.49  Aligned_cols=96  Identities=16%  Similarity=0.167  Sum_probs=64.7

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHh----CCCeEEEEecC-CcHHHHHhcCCCEEE
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL----GNTHVTATCGA-RNIELVKSLGADEVL  202 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~----~g~~v~~~~~~-~~~~~~~~lg~~~v~  202 (327)
                      ..||.....+..| +..++.    -.|++++|.|.+..+|.=...++..    .+++|+...+. ..+..  .       
T Consensus       136 ~~PcTp~av~~lL-~~~~i~----l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~--~-------  201 (286)
T PRK14184        136 FRPCTPAGVMTLL-ERYGLS----PAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAE--E-------  201 (286)
T ss_pred             CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHH--H-------
Confidence            3465555555455 555653    4789999999999999988888887    77888765532 22211  0       


Q ss_pred             eCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          203 DYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                               .     +..|+++-++|.+.+ -.-+.++++..+|++|...
T Consensus       202 ---------~-----~~ADIVI~AvG~p~l-i~~~~vk~GavVIDVGi~~  236 (286)
T PRK14184        202 ---------C-----READFLFVAIGRPRF-VTADMVKPGAVVVDVGINR  236 (286)
T ss_pred             ---------H-----HhCCEEEEecCCCCc-CCHHHcCCCCEEEEeeeec
Confidence                     0     237888888887664 2235678888999988543

>PLN02240 UDP-glucose 4-epimerase

Probab=92.08  E-value=0.45  Score=42.36  Aligned_cols=34  Identities=24%  Similarity=0.275  Sum_probs=30.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .+++|||+||+|.+|...++.+...|.+|+++++
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~   37 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDN   37 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            4678999999999999999888888999998874

>PRK07402 precorrin-6B methylase; Provisional

Probab=92.03  E-value=1.2  Score=36.15  Aligned_cols=95  Identities=16%  Similarity=0.162  Sum_probs=52.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHH----HhcCCCE--EEeCCCCCcccccCCCCCcccE-
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELV----KSLGADE--VLDYKTPDGAALKSPSGRKYDA-  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~----~~lg~~~--v~~~~~~~~~~~~~~~~~~~d~-  222 (327)
                      +++++||=.|  .|.|..++.+++.. +.+|++++. ++..+.+    +.++.+.  ++..+..  ....... ..+|. 
T Consensus        39 ~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~--~~~~~~~-~~~d~v  113 (196)
T PRK07402         39 EPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAP--ECLAQLA-PAPDRV  113 (196)
T ss_pred             CCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchH--HHHhhCC-CCCCEE
Confidence            6788887776  44566667777654 569999985 4443333    3455433  2221111  1111111 12344 


Q ss_pred             EEeCCCC--CcccccccccCCCcEEEeecCC
Q 020314          223 VINCVTG--IPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       223 v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      +++....  ..+..+.+.|+++|+++.....
T Consensus       114 ~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~  144 (196)
T PRK07402        114 CIEGGRPIKEILQAVWQYLKPGGRLVATASS  144 (196)
T ss_pred             EEECCcCHHHHHHHHHHhcCCCeEEEEEeec
Confidence            4443222  2267778899999999877654

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=92.01  E-value=0.7  Score=40.37  Aligned_cols=45  Identities=27%  Similarity=0.366  Sum_probs=36.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-Cc---HHHHHhcC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RN---IELVKSLG  197 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~---~~~~~~lg  197 (327)
                      .+..|+|+||+|=+|...+..+...|++|.+++|+ ++   .+.++++.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~   53 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLE   53 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcc
Confidence            56789999999999999999999999999999964 32   23455554

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=92.01  E-value=0.37  Score=42.22  Aligned_cols=37  Identities=24%  Similarity=0.363  Sum_probs=33.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      -.+.+++|+|+++|+|..++..+...|++|+.++++.
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~   69 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNE   69 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCH
Confidence            3667899999999999999999999999999999763

>PRK07774 short chain dehydrogenase; Provisional

Probab=92.00  E-value=0.34  Score=40.69  Aligned_cols=35  Identities=17%  Similarity=0.174  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+.+++|+|++|++|...++.+...|++|+.+.+.
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~   39 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADIN   39 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            56789999999999999998888889999998865

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=92.00  E-value=0.44  Score=40.42  Aligned_cols=35  Identities=17%  Similarity=0.134  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|...++.+...|++++.+.+.
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~   40 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS   40 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999999999999988877653

>PRK05855 short chain dehydrogenase; Validated

Probab=91.98  E-value=0.31  Score=46.65  Aligned_cols=36  Identities=17%  Similarity=0.063  Sum_probs=31.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ..+.++||+||+|++|...++.+...|++|+.++++
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~  348 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDID  348 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            356789999999999999998888899999888865

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=91.96  E-value=0.32  Score=40.47  Aligned_cols=79  Identities=18%  Similarity=0.155  Sum_probs=56.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHH-HH-hcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIEL-VK-SLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW  232 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~-~~-~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~  232 (327)
                      +++|.| .|.+|...++.+...|..|+.+... ++.+. +. .+.. +++..+..+.+.++..+-..+|.++-++|.+..
T Consensus         2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~   79 (225)
T COG0569           2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDATDEDVLEEAGIDDADAVVAATGNDEV   79 (225)
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH
Confidence            478888 8999999999999999999999855 45444 22 3444 344455555556666666779999999998654


Q ss_pred             cccc
Q 020314          233 STFE  236 (327)
Q Consensus       233 ~~~~  236 (327)
                      +..+
T Consensus        80 N~i~   83 (225)
T COG0569          80 NSVL   83 (225)
T ss_pred             HHHH
Confidence            4333

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=91.96  E-value=0.28  Score=43.09  Aligned_cols=71  Identities=21%  Similarity=0.267  Sum_probs=43.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|+|+|++|.+|..+++.+...|.+|+++.+. ++.......+...+. |..+.+ .+.+..  .++|+||++.+.
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~l~~~~--~~~d~vi~~a~~   74 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPA-SLRKAV--AGCRALFHVAAD   74 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHH-HHHHHH--hCCCEEEEecee
Confidence            59999999999999999888889999999864 332222222322221 222211 111111  247999988753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=91.94  E-value=2.3  Score=35.20  Aligned_cols=34  Identities=15%  Similarity=0.075  Sum_probs=30.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      -.+.+|+|.| .|.+|..+++++...|++++++++
T Consensus        21 l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD   54 (217)
T cd05211          21 LEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSD   54 (217)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEc
Confidence            3788999999 899999999999999998888774

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=91.91  E-value=0.54  Score=41.25  Aligned_cols=90  Identities=14%  Similarity=0.111  Sum_probs=59.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      -.+++|.|+| .|.+|...++.++.+|++|++..+..+..    -+........+ -.+.+     ...|+|+.+.....
T Consensus       134 l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~----~~~~~~~~~~~-l~e~l-----~~aDvvv~~lPlt~  202 (312)
T PRK15469        134 REDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW----PGVQSFAGREE-LSAFL-----SQTRVLINLLPNTP  202 (312)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC----CCceeeccccc-HHHHH-----hcCCEEEECCCCCH
Confidence            3788999999 89999999999999999999887532211    01111110000 01111     24789988887432


Q ss_pred             -----c-cccccccCCCcEEEeecCCc
Q 020314          232 -----W-STFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       232 -----~-~~~~~~l~~~G~~v~~g~~~  252 (327)
                           + ...++.|+++..+|.++...
T Consensus       203 ~T~~li~~~~l~~mk~ga~lIN~aRG~  229 (312)
T PRK15469        203 ETVGIINQQLLEQLPDGAYLLNLARGV  229 (312)
T ss_pred             HHHHHhHHHHHhcCCCCcEEEECCCcc
Confidence                 1 24677899999999887553

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=91.83  E-value=2.5  Score=37.51  Aligned_cols=95  Identities=22%  Similarity=0.264  Sum_probs=65.8

Q ss_pred             cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCC
Q 020314          129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTP  207 (327)
Q Consensus       129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~  207 (327)
                      .||........| +..++.    -.|++|+|.|.+..+|.=+..++...++.|+..-+. ..++.               
T Consensus       211 ~PCTp~avielL-~~y~i~----l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~---------------  270 (364)
T PLN02616        211 VPCTPKGCIELL-HRYNVE----IKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEE---------------  270 (364)
T ss_pred             CCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHH---------------
Confidence            455544444444 444552    389999999999999999999999889888765422 22211               


Q ss_pred             CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                         ..     +..|+++-++|.+.+ --.+.++++..+|++|-..
T Consensus       271 ---~~-----r~ADIVIsAvGkp~~-i~~d~vK~GAvVIDVGIn~  306 (364)
T PLN02616        271 ---IT-----READIIISAVGQPNM-VRGSWIKPGAVVIDVGINP  306 (364)
T ss_pred             ---HH-----hhCCEEEEcCCCcCc-CCHHHcCCCCEEEeccccc
Confidence               00     347899999987764 3356788999999999653

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=91.82  E-value=0.36  Score=42.29  Aligned_cols=31  Identities=23%  Similarity=0.264  Sum_probs=27.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +|||+||+|.+|..+++.+...|.+|+++.+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~   31 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDN   31 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeC
Confidence            4899999999999999988888999887764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=91.79  E-value=2.5  Score=35.18  Aligned_cols=89  Identities=15%  Similarity=0.163  Sum_probs=55.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCe---EEEEecC-----Cc--------HHHHHhcCCCEEEeCCCCCc-ccccCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTH---VTATCGA-----RN--------IELVKSLGADEVLDYKTPDG-AALKSP  215 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~---v~~~~~~-----~~--------~~~~~~lg~~~v~~~~~~~~-~~~~~~  215 (327)
                      ++++++|.| +|+.|.+++..+...|++   ++.+.+.     +|        .++++.++... .+   .+. +.+   
T Consensus        24 ~~~rvlvlG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~l~~~l---   95 (226)
T cd05311          24 EEVKIVING-AGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GTLKEAL---   95 (226)
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CCHHHHH---
Confidence            678999999 799999999888888975   7766654     23        22344443211 11   111 111   


Q ss_pred             CCCcccEEEeCCCCCcc-cccccccCCCcEEEeecCC
Q 020314          216 SGRKYDAVINCVTGIPW-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       216 ~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~  251 (327)
                        .++|+++++++...+ ...++.+.++..+..+..+
T Consensus        96 --~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsnP  130 (226)
T cd05311          96 --KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALANP  130 (226)
T ss_pred             --hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCCC
Confidence              238999999984333 3556667677666655543

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.77  E-value=0.38  Score=40.16  Aligned_cols=35  Identities=26%  Similarity=0.198  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+++|+|++|++|..++..+...|++|+.++++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~   40 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLART   40 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            45789999999999999998888899999998865

>PLN03075 nicotianamine synthase; Provisional

Probab=91.76  E-value=0.38  Score=41.56  Aligned_cols=96  Identities=16%  Similarity=0.169  Sum_probs=58.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHHHHHhc-----CCCEEEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIELVKSL-----GADEVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~~~~~l-----g~~~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      .++++|+-.| +|+.|+.++.+++.+  +.+++.++.+ +..+.+++.     +...-+.....+.... ....+.||+|
T Consensus       122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~-~~~l~~FDlV  199 (296)
T PLN03075        122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDV-TESLKEYDVV  199 (296)
T ss_pred             CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhc-ccccCCcCEE
Confidence            3778899999 899999888888644  4588898844 444444432     2221112211111111 1112569999


Q ss_pred             EeCC------CCC--cccccccccCCCcEEEeec
Q 020314          224 INCV------TGI--PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       224 ~d~~------g~~--~~~~~~~~l~~~G~~v~~g  249 (327)
                      |-.+      ..+  .+....+.|+++|.++.-.
T Consensus       200 F~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        200 FLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             EEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            8764      121  2678888999999998654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=91.74  E-value=0.38  Score=40.66  Aligned_cols=35  Identities=14%  Similarity=0.167  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++++|+|+++++|...++.+...|++|+.+.+.
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~   44 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRN   44 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCC
Confidence            68899999999999999998888889999998865

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=91.72  E-value=0.36  Score=40.99  Aligned_cols=91  Identities=18%  Similarity=0.154  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH----hcCCC---EEEeCCCCCcccccCCCCCcccEEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK----SLGAD---EVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~----~lg~~---~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      ++.+||=.|  .|.|..+..+++. |.+|++++. ++..+.++    ..|..   .++..+.   ........+.+|+|+
T Consensus        44 ~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~---~~l~~~~~~~fD~V~  117 (255)
T PRK11036         44 RPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAA---QDIAQHLETPVDLIL  117 (255)
T ss_pred             CCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCH---HHHhhhcCCCCCEEE
Confidence            556888887  4567788888875 789999984 44444443    33321   1221111   111111235699998


Q ss_pred             eCCC-----CC--cccccccccCCCcEEEeec
Q 020314          225 NCVT-----GI--PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       225 d~~g-----~~--~~~~~~~~l~~~G~~v~~g  249 (327)
                      ....     .+  .+..+.+.|+|+|+++.+-
T Consensus       118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            5432     22  2677888999999997654

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=91.66  E-value=0.39  Score=40.16  Aligned_cols=34  Identities=21%  Similarity=0.205  Sum_probs=29.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      ++.++||+|++|++|...++.+...|++|+++.+
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~   37 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYA   37 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            4578999999999999999999888999877764

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=91.64  E-value=0.55  Score=41.41  Aligned_cols=88  Identities=15%  Similarity=0.083  Sum_probs=57.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHH-hCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-C
Q 020314          153 QQKNILITAASGAVGLYAVQLAK-LGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-I  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~-~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~  230 (327)
                      .|+++.|+| .|.+|...++.++ .+|++|++..+..+.+....++....    + -.+++     ...|+|.-+..- +
T Consensus       144 ~gktvGIiG-~G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~----~-l~ell-----~~sDvv~lh~plt~  212 (323)
T PRK15409        144 HHKTLGIVG-MGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYC----D-LDTLL-----QESDFVCIILPLTD  212 (323)
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEec----C-HHHHH-----HhCCEEEEeCCCCh
Confidence            788999999 8999999999998 89999997765433332233443211    1 01122     236788776652 2


Q ss_pred             c----c-cccccccCCCcEEEeecCC
Q 020314          231 P----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      .    + ...++.|+++..+|.++..
T Consensus       213 ~T~~li~~~~l~~mk~ga~lIN~aRG  238 (323)
T PRK15409        213 ETHHLFGAEQFAKMKSSAIFINAGRG  238 (323)
T ss_pred             HHhhccCHHHHhcCCCCeEEEECCCc
Confidence            1    2 2566788888888887644

>PRK08251 short chain dehydrogenase; Provisional

Probab=91.62  E-value=0.44  Score=39.99  Aligned_cols=34  Identities=21%  Similarity=0.206  Sum_probs=29.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++|+||+|++|...++.+...|++|+.+.+.
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~   35 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARR   35 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            4579999999999999888887789999888754

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=91.61  E-value=1.6  Score=35.85  Aligned_cols=92  Identities=16%  Similarity=0.086  Sum_probs=51.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      +++++||-.|+  |.|..+..+++.. .++++++.. +..+    .++..+...+--...+.....  ...+.||+|+-.
T Consensus        77 ~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~I~~~  151 (212)
T PRK00312         77 KPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGW--PAYAPFDRILVT  151 (212)
T ss_pred             CCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCC--CcCCCcCEEEEc
Confidence            78899999984  3455555566553 488888743 3222    233445432211111111111  112469998865


Q ss_pred             CCC-CcccccccccCCCcEEEee
Q 020314          227 VTG-IPWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       227 ~g~-~~~~~~~~~l~~~G~~v~~  248 (327)
                      ..- .......+.|+++|+++..
T Consensus       152 ~~~~~~~~~l~~~L~~gG~lv~~  174 (212)
T PRK00312        152 AAAPEIPRALLEQLKEGGILVAP  174 (212)
T ss_pred             cCchhhhHHHHHhcCCCcEEEEE
Confidence            443 2355677899999998754

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=91.61  E-value=1.4  Score=39.70  Aligned_cols=56  Identities=23%  Similarity=0.253  Sum_probs=40.4

Q ss_pred             hhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       124 ~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .+|.+....+++- .++. ..+..    -+|.+|.|.| .|.+|..+++.+...|++|++++.
T Consensus       183 ~~aTg~Gv~~~~~-~a~~-~~g~~----l~G~rVaVQG-~GNVg~~aa~~l~~~GAkvva~sd  238 (411)
T COG0334         183 SEATGYGVFYAIR-EALK-ALGDD----LEGARVAVQG-FGNVGQYAAEKLHELGAKVVAVSD  238 (411)
T ss_pred             CcccceehHHHHH-HHHH-HcCCC----cCCCEEEEEC-ccHHHHHHHHHHHHcCCEEEEEEc
Confidence            3454455454444 4553 33321    2899999999 899999999999988999999874

>PRK09135 pteridine reductase; Provisional

Probab=91.56  E-value=0.39  Score=40.22  Aligned_cols=35  Identities=17%  Similarity=0.147  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+|++|++|..+++.+...|++|+.+++.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~   39 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR   39 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            45789999999999999998888889999998854

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=91.55  E-value=1.3  Score=38.47  Aligned_cols=34  Identities=15%  Similarity=0.119  Sum_probs=28.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~  187 (327)
                      ++++++|+|+ |++|.+++..+...|++ |+.+.++
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~  159 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIK  159 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCC
Confidence            5788999995 89999998888888985 8777764

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=91.55  E-value=0.62  Score=30.97  Aligned_cols=34  Identities=21%  Similarity=0.187  Sum_probs=22.9

Q ss_pred             CCCCeEEEEcCCChHHHHHH-HHHHhCCCeEEEEe
Q 020314          152 GQQKNILITAASGAVGLYAV-QLAKLGNTHVTATC  185 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~-~la~~~g~~v~~~~  185 (327)
                      ...++|||.|++++.|++.- .+|-..|+..+.+.
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~   71 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVS   71 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEe
Confidence            44588999999999999753 44446677888776

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=91.55  E-value=0.46  Score=41.84  Aligned_cols=89  Identities=17%  Similarity=0.027  Sum_probs=61.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC-CCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT-GIP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-~~~  231 (327)
                      .|+++-|.| .|.+|.+.++.++.+|++|....+..+.+..+.+++.++-    . .+.+     ...|++.-+.+ .+.
T Consensus       145 ~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~----l-~ell-----~~sDii~l~~Plt~~  213 (324)
T COG1052         145 RGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVD----L-DELL-----AESDIISLHCPLTPE  213 (324)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceecc----H-HHHH-----HhCCEEEEeCCCChH
Confidence            689999999 9999999999999999999999876553333445444331    1 1122     23577765444 322


Q ss_pred             -----ccccccccCCCcEEEeecCCc
Q 020314          232 -----WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       232 -----~~~~~~~l~~~G~~v~~g~~~  252 (327)
                           -...++.|++++.+|.++...
T Consensus       214 T~hLin~~~l~~mk~ga~lVNtaRG~  239 (324)
T COG1052         214 TRHLINAEELAKMKPGAILVNTARGG  239 (324)
T ss_pred             HhhhcCHHHHHhCCCCeEEEECCCcc
Confidence                 235667899999999887543

>PRK07201 short chain dehydrogenase; Provisional

Probab=91.54  E-value=0.42  Score=46.68  Aligned_cols=35  Identities=23%  Similarity=0.168  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+||+|++|..+++.+...|++|+++++.
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~  404 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARN  404 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            46789999999999999998888889999998864

>PRK07578 short chain dehydrogenase; Provisional

Probab=91.53  E-value=0.52  Score=38.15  Aligned_cols=31  Identities=26%  Similarity=0.296  Sum_probs=25.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++|+|+++++|...+..+... .+|+.+.++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~   32 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRS   32 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecC
Confidence            5899999999999888776655 888888754

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=91.50  E-value=0.86  Score=42.09  Aligned_cols=36  Identities=19%  Similarity=0.132  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++..+|||+||+|-+|..++..+...|.+|+++++.
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~  153 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF  153 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            566789999999999999999888889999998853

>PLN02583 cinnamoyl-CoA reductase

Probab=91.45  E-value=0.42  Score=41.63  Aligned_cols=36  Identities=25%  Similarity=0.285  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++|||+||+|.+|..+++.+...|++|+++.++
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~   39 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK   39 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence            456789999999999999999998899999998863

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=91.45  E-value=1.2  Score=40.48  Aligned_cols=92  Identities=17%  Similarity=0.220  Sum_probs=59.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cC-Cc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GA-RN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~-~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      ++.++||.| +|-+|..++..+...|.+-+.++ ++ +| .++++++|... +..++...    ..  ..+|+||.+++.
T Consensus       177 ~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~l~el~~----~l--~~~DvVissTsa  248 (414)
T COG0373         177 KDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VALEELLE----AL--AEADVVISSTSA  248 (414)
T ss_pred             ccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ecHHHHHH----hh--hhCCEEEEecCC
Confidence            788999999 79999999999999998666666 55 33 45788999443 22222111    11  248999999987


Q ss_pred             Cc--c--cccccccCCCc--EEEeecCCc
Q 020314          230 IP--W--STFEPNLGTTG--KVIDFNPSP  252 (327)
Q Consensus       230 ~~--~--~~~~~~l~~~G--~~v~~g~~~  252 (327)
                      +.  +  ......++..-  -+++++.+.
T Consensus       249 ~~~ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         249 PHPIITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             CccccCHHHHHHHHhcccCeEEEEecCCC
Confidence            64  1  12233444333  356777654

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=91.45  E-value=1.5  Score=41.67  Aligned_cols=92  Identities=14%  Similarity=0.048  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      ++++++|.| +|++|.+++..+...|++++.+.++ ++.+ +++.++.. .+...+.     ........|+++++++-.
T Consensus       378 ~~k~vlIlG-aGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~~-----~~~~~~~~diiINtT~vG  450 (529)
T PLN02520        378 AGKLFVVIG-AGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLADL-----ENFHPEEGMILANTTSVG  450 (529)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhHh-----hhhccccCeEEEecccCC
Confidence            567899999 5899999999999999988877654 3433 44455432 2222111     001112478999988633


Q ss_pred             ccc------ccccccCCCcEEEeecCC
Q 020314          231 PWS------TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~~~------~~~~~l~~~G~~v~~g~~  251 (327)
                      ...      .....+++.+.++++-..
T Consensus       451 m~~~~~~~pl~~~~l~~~~~v~D~vY~  477 (529)
T PLN02520        451 MQPNVDETPISKHALKHYSLVFDAVYT  477 (529)
T ss_pred             CCCCCCCCcccHhhCCCCCEEEEeccC
Confidence            211      112345566666666543

>PRK12747 short chain dehydrogenase; Provisional

Probab=91.44  E-value=0.52  Score=39.73  Aligned_cols=33  Identities=21%  Similarity=0.162  Sum_probs=29.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      .+++++|+|+++++|.++++.+...|++|+...
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~   35 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHY   35 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence            467899999999999999999988999988764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=91.43  E-value=0.4  Score=41.83  Aligned_cols=31  Identities=23%  Similarity=0.237  Sum_probs=25.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC--CeEEEEec
Q 020314          156 NILITAASGAVGLYAVQLAKLGN--THVTATCG  186 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~  186 (327)
                      +|+|+||+|.+|..+++.+...|  .+|++..+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~   33 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDK   33 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecC
Confidence            48999999999999998777655  67887764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK14982 acyl-ACP reductase; Provisional

Probab=91.42  E-value=0.52  Score=41.70  Aligned_cols=91  Identities=14%  Similarity=0.143  Sum_probs=56.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHH-hCCC-eEEEEecC-CcHHH-HHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAK-LGNT-HVTATCGA-RNIEL-VKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~-~~g~-~v~~~~~~-~~~~~-~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .+++|+|+||+|.+|..+++.+. ..|. +++.+.++ ++.+. ..+++...+.+.    .+.+     ...|+|+.+++
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l----~~~l-----~~aDiVv~~ts  224 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSL----EEAL-----PEADIVVWVAS  224 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhH----HHHH-----ccCCEEEECCc
Confidence            67899999999999998887775 4565 77766654 34433 334432211110    1111     24899999888


Q ss_pred             CCc-ccccccccCCCcEEEeecCCc
Q 020314          229 GIP-WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       229 ~~~-~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .+. +..-.+.+++.-.+++++.+.
T Consensus       225 ~~~~~~I~~~~l~~~~~viDiAvPR  249 (340)
T PRK14982        225 MPKGVEIDPETLKKPCLMIDGGYPK  249 (340)
T ss_pred             CCcCCcCCHHHhCCCeEEEEecCCC
Confidence            644 223334667777778888654

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=91.42  E-value=1.5  Score=37.96  Aligned_cols=34  Identities=9%  Similarity=0.052  Sum_probs=27.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~  187 (327)
                      ++++++|.| +||.+.+++..+...|+ +++.+.++
T Consensus       126 ~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~  160 (283)
T PRK14027        126 KLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLD  160 (283)
T ss_pred             CCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            578899999 79999999988888998 66666655

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=91.40  E-value=1.8  Score=29.71  Aligned_cols=34  Identities=18%  Similarity=0.143  Sum_probs=26.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~  186 (327)
                      -.+++++|.| .|.+|..+++.+...+. ++....+
T Consensus        21 ~~~~~v~i~G-~G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLG-AGEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3678899999 59999999998888754 5554433

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=91.39  E-value=0.73  Score=43.63  Aligned_cols=87  Identities=16%  Similarity=0.065  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-c
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-P  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~  231 (327)
                      .|++|.|+| .|.+|...++.++.+|++|++.++....+....+|...+ +  + ..+.+     ...|+|+-+++.. .
T Consensus       137 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~-~--~-l~ell-----~~aDvV~l~lPlt~~  206 (525)
T TIGR01327       137 YGKTLGVIG-LGRIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELV-D--D-LDELL-----ARADFITVHTPLTPE  206 (525)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEc-C--C-HHHHH-----hhCCEEEEccCCChh
Confidence            678999999 899999999999999999999885433333444553211 0  0 01111     2367777776632 1


Q ss_pred             ----c-cccccccCCCcEEEeec
Q 020314          232 ----W-STFEPNLGTTGKVIDFN  249 (327)
Q Consensus       232 ----~-~~~~~~l~~~G~~v~~g  249 (327)
                          + ...++.|+++..+|.++
T Consensus       207 T~~li~~~~l~~mk~ga~lIN~a  229 (525)
T TIGR01327       207 TRGLIGAEELAKMKKGVIIVNCA  229 (525)
T ss_pred             hccCcCHHHHhcCCCCeEEEEcC
Confidence                1 24456777777777665

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=91.39  E-value=1.5  Score=37.90  Aligned_cols=53  Identities=19%  Similarity=0.269  Sum_probs=43.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec----CCcHHHHHhcCCCEEEeCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG----ARNIELVKSLGADEVLDYK  205 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~----~~~~~~~~~lg~~~v~~~~  205 (327)
                      ++|. .+|-+.+|.+|.+.+.+|..+|++++.+..    .+|+++++.+|+.-+....
T Consensus        60 ~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          60 KPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             CCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence            7887 677788999999999999999998888763    2678899999998766544

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=91.38  E-value=0.13  Score=46.71  Aligned_cols=73  Identities=25%  Similarity=0.282  Sum_probs=46.9

Q ss_pred             CCCeEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC--cccccC
Q 020314          153 QQKNILITAA----------------SGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD--GAALKS  214 (327)
Q Consensus       153 ~~~~vlV~g~----------------~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~  214 (327)
                      +|.+|||+||                +|.+|.+.++.+...|++|+.+.++...+.  ..+. ..++..+..  .+....
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~--~~~~-~~~dv~~~~~~~~~v~~  263 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPT--PAGV-KRIDVESAQEMLDAVLA  263 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccC--CCCc-EEEccCCHHHHHHHHHH
Confidence            7889999999                666999999999999999999886542211  1111 223333222  111111


Q ss_pred             CCCCcccEEEeCCCC
Q 020314          215 PSGRKYDAVINCVTG  229 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~  229 (327)
                      .. +.+|+++.+.+-
T Consensus       264 ~~-~~~DilI~~Aav  277 (399)
T PRK05579        264 AL-PQADIFIMAAAV  277 (399)
T ss_pred             hc-CCCCEEEEcccc
Confidence            11 358999999884

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.36  E-value=3.4  Score=35.47  Aligned_cols=96  Identities=16%  Similarity=0.153  Sum_probs=64.9

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||........| +..++.    -.|++|+|.|.+..+|.=...++...+++|+..-+. ..++.              
T Consensus       136 ~~PcTp~avi~ll-~~~~i~----l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~--------------  196 (282)
T PRK14182        136 PRPCTPAGVMRML-DEARVD----PKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAG--------------  196 (282)
T ss_pred             CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH--------------
Confidence            3565554555455 555553    489999999999999999999999889877754322 22210              


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                          ..     +..|+++-++|.+.+ ---+.++++..++++|...
T Consensus       197 ----~~-----~~ADIvI~AvGk~~~-i~~~~ik~gaiVIDvGin~  232 (282)
T PRK14182        197 ----EV-----GRADILVAAIGKAEL-VKGAWVKEGAVVIDVGMNR  232 (282)
T ss_pred             ----HH-----hhCCEEEEecCCcCc-cCHHHcCCCCEEEEeecee
Confidence                00     347888888886542 2246788888889988553

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=91.27  E-value=0.37  Score=41.47  Aligned_cols=211  Identities=20%  Similarity=0.141  Sum_probs=107.7

Q ss_pred             CCCeEEEEEeEEee-ChhhHHHHhcCCCCCCCCCCCeeec-ccceEEEEec-CCCCCCCCCCCEEEEEcc---Cccccee
Q 020314           33 NKDEALLKVEAASI-NPIDWKLQKGMLRPFLPRKFPFIPA-SDVAGEVIGL-GSEVKNFKVGDKVVAVLS---GGGLAEF  106 (327)
Q Consensus        33 ~~~eV~V~v~~~~i-~~~d~~~~~g~~~~~~~~~~p~~~G-~e~~G~V~~v-G~~~~~~~~Gd~V~~~~~---~g~~a~~  106 (327)
                      ..+||+|+.-+..- ...|.......... .+ .--..++ .|.+=.|.+- -++..-|+.|+..+.+.+   .....+-
T Consensus        29 ~GheVlVe~gAG~gsg~~D~~Y~~aGA~I-v~-ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~~~lt~~  106 (371)
T COG0686          29 HGHEVLVETGAGAGSGFDDDDYEAAGAKI-VA-TAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAASPELTEA  106 (371)
T ss_pred             CCcEEEEecCCcCCCCCChHHHHHcCCEE-ec-CHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCChHHHHH
Confidence            34589998876543 33444433322110 00 0001333 5555555541 122334999999887661   1111110


Q ss_pred             -----EeecCCceeeCCCC-C----ChhhhcccCchHHHHHHHHHHhhCC--c---cCCCCCCCeEEEEcCCChHHHHHH
Q 020314          107 -----AVAKESLTVARPQE-V----SAAEGAGIPCAGLTAHQALTQSLGV--K---LDGSGQQKNILITAASGAVGLYAV  171 (327)
Q Consensus       107 -----~~~~~~~~~~ip~~-~----~~~~aa~~~~~~~ta~~al~~~~~~--~---~~~~~~~~~vlV~g~~g~~G~~~~  171 (327)
                           +..-+.-.+..|++ +    ++.+.|.-...-..|++..+...+-  -   .++. +...|.|.| .|.+|.-++
T Consensus       107 l~~~gvtaIayETV~~~~g~lPlLaPMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV-~~~kv~iiG-GGvvgtnaA  184 (371)
T COG0686         107 LLKSGVTAIAYETVQLPDGNLPLLAPMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGV-LPAKVVVLG-GGVVGTNAA  184 (371)
T ss_pred             HHHcCcceEEEEEEEcCCCCCcccchHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCC-CCccEEEEC-CccccchHH
Confidence                 00011122333442 1    2333333333334555533222111  0   1122 333477778 699999999


Q ss_pred             HHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEe-CCCCCcccccCCCCCcccEEEeCC---CC--Cc--ccccccccCCC
Q 020314          172 QLAKLGNTHVTATCG-ARNIELVKSLGADEVLD-YKTPDGAALKSPSGRKYDAVINCV---TG--IP--WSTFEPNLGTT  242 (327)
Q Consensus       172 ~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~-~~~~~~~~~~~~~~~~~d~v~d~~---g~--~~--~~~~~~~l~~~  242 (327)
                      .+|.-+|++|+..+. .+|+..++.+-...+.. ++... .+.+..  ...|+++.++   |.  +.  .+..++.|+|+
T Consensus       185 kiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~-~iee~v--~~aDlvIgaVLIpgakaPkLvt~e~vk~MkpG  261 (371)
T COG0686         185 KIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPS-NIEEAV--KKADLVIGAVLIPGAKAPKLVTREMVKQMKPG  261 (371)
T ss_pred             HHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHH-HHHHHh--hhccEEEEEEEecCCCCceehhHHHHHhcCCC
Confidence            999999999999984 47887776443333221 22211 111111  3578888765   22  11  56778999999


Q ss_pred             cEEEeecC
Q 020314          243 GKVIDFNP  250 (327)
Q Consensus       243 G~~v~~g~  250 (327)
                      +.+|++..
T Consensus       262 sVivDVAi  269 (371)
T COG0686         262 SVIVDVAI  269 (371)
T ss_pred             cEEEEEEE
Confidence            99998853

>PLN02427 UDP-apiose/xylose synthase

Probab=91.26  E-value=0.75  Score=41.69  Aligned_cols=35  Identities=17%  Similarity=0.047  Sum_probs=28.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~  187 (327)
                      +..+|||+||+|-+|..+++.+... |.+|+++++.
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~   48 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVY   48 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecC
Confidence            4457999999999999888888776 5799988854

>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

Probab=91.24  E-value=1.2  Score=34.42  Aligned_cols=96  Identities=13%  Similarity=0.128  Sum_probs=53.3

Q ss_pred             eEEEEcCCChHHHHHHHHHH-hCCCeEEEEecC---CcHHHHHh----cCCC-EEEeCCCC-------CcccccCC----
Q 020314          156 NILITAASGAVGLYAVQLAK-LGNTHVTATCGA---RNIELVKS----LGAD-EVLDYKTP-------DGAALKSP----  215 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~-~~g~~v~~~~~~---~~~~~~~~----lg~~-~v~~~~~~-------~~~~~~~~----  215 (327)
                      +|.|+| .|.+|...++.+. ..+.+++++...   +-..++-+    .|.- .-+..++.       ...+....    
T Consensus         2 kv~I~G-~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~   80 (149)
T smart00846        2 KVGING-FGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN   80 (149)
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence            488999 5999998888777 456788887643   22333321    2210 00111110       00111111    


Q ss_pred             ---CCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc
Q 020314          216 ---SGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       216 ---~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~  252 (327)
                         ...++|+|+||+|.-. .+.+..++..+.+-|.++.+.
T Consensus        81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~  121 (149)
T smart00846       81 LPWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPA  121 (149)
T ss_pred             CcccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCC
Confidence               2347899999998644 344556787776666666554

GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=91.24  E-value=6.5  Score=33.16  Aligned_cols=91  Identities=14%  Similarity=0.085  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCC-CEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGA-DEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .++.+||-.|+ |. |..+..+++ .|.++++++. ++..+.++.... ...+..+-..   .. .....+|+|+.+..-
T Consensus        41 ~~~~~vLDiGc-G~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~---~~-~~~~~fD~V~s~~~l  113 (251)
T PRK10258         41 RKFTHVLDAGC-GP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIES---LP-LATATFDLAWSNLAV  113 (251)
T ss_pred             cCCCeEEEeeC-CC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCccc---Cc-CCCCcEEEEEECchh
Confidence            45678999984 43 555555554 5789999984 455666654332 2222111111   11 123469999875431


Q ss_pred             -------CcccccccccCCCcEEEeec
Q 020314          230 -------IPWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       230 -------~~~~~~~~~l~~~G~~v~~g  249 (327)
                             ..+..+.+.|+++|.++...
T Consensus       114 ~~~~d~~~~l~~~~~~Lk~gG~l~~~~  140 (251)
T PRK10258        114 QWCGNLSTALRELYRVVRPGGVVAFTT  140 (251)
T ss_pred             hhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence                   12667778999999998764

>PRK07102 short chain dehydrogenase; Provisional

Probab=91.22  E-value=0.43  Score=40.01  Aligned_cols=33  Identities=15%  Similarity=0.162  Sum_probs=29.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++|+||+|++|...++.+...|++|+++.+.
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~   34 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARD   34 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence            469999999999999998888889999998865

>PLN02476 O-methyltransferase

Probab=91.21  E-value=0.57  Score=40.15  Aligned_cols=94  Identities=13%  Similarity=0.107  Sum_probs=57.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHH----HHHhcCCCEEEeCCCCC-ccccc----CCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIE----LVKSLGADEVLDYKTPD-GAALK----SPSGRK  219 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~----~~~~lg~~~v~~~~~~~-~~~~~----~~~~~~  219 (327)
                      .+.++||=.|  +.+|..++.+|+.+  +.+++++..+ +..+    .+++.|...-+.....+ .+.+.    ......
T Consensus       117 ~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~~~~~~  194 (278)
T PLN02476        117 LGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQNGEGSS  194 (278)
T ss_pred             cCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcccCCC
Confidence            6788999998  57788888888876  3578888744 4433    33566654222211111 11111    111246


Q ss_pred             ccEEE-eCCCC---CcccccccccCCCcEEEe
Q 020314          220 YDAVI-NCVTG---IPWSTFEPNLGTTGKVID  247 (327)
Q Consensus       220 ~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~  247 (327)
                      ||+|| |+--.   ..++.++++|+++|.++.
T Consensus       195 FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~  226 (278)
T PLN02476        195 YDFAFVDADKRMYQDYFELLLQLVRVGGVIVM  226 (278)
T ss_pred             CCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence            99987 44432   127788899999999873

>PRK07791 short chain dehydrogenase; Provisional

Probab=91.17  E-value=0.45  Score=41.18  Aligned_cols=35  Identities=14%  Similarity=0.125  Sum_probs=30.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      -+++++||+||++++|.+.++.+...|++|+.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~   38 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI   38 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeC
Confidence            36789999999999999999888889999888763

>PRK06924 short chain dehydrogenase; Provisional

Probab=91.17  E-value=0.55  Score=39.51  Aligned_cols=34  Identities=21%  Similarity=0.231  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      ++++|+||+|++|...++.+...|++|+.+++..
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~   35 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE   35 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence            3699999999999999988888899999888643

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=91.12  E-value=0.47  Score=40.10  Aligned_cols=35  Identities=17%  Similarity=0.092  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||++++|...++.+...|++++.+++.
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~   44 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN   44 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            57899999999999999999888899999888754

>TIGR00477 tehB tellurite resistance protein TehB

Probab=91.09  E-value=0.22  Score=40.40  Aligned_cols=90  Identities=16%  Similarity=0.051  Sum_probs=50.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      .++.+||-.|+  |.|..+..+++ .|.+|++++- +.-.+.+    +..+..  +.....+..... . ...+|+|+.+
T Consensus        29 ~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~d~~~~~-~-~~~fD~I~~~  101 (195)
T TIGR00477        29 VAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAYDINAAA-L-NEDYDFIFST  101 (195)
T ss_pred             CCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEeccchhcc-c-cCCCCEEEEe
Confidence            45668998883  56777888887 4789999984 3333322    222322  111000100011 1 2359999865


Q ss_pred             CC-----C----CcccccccccCCCcEEEee
Q 020314          227 VT-----G----IPWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       227 ~g-----~----~~~~~~~~~l~~~G~~v~~  248 (327)
                      ..     .    ..+..+.++|+++|.++.+
T Consensus       102 ~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~  132 (195)
T TIGR00477       102 VVFMFLQAGRVPEIIANMQAHTRPGGYNLIV  132 (195)
T ss_pred             cccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence            32     1    1255677799999996544

Part of a tellurite-reducing operon tehA and tehB

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.07  E-value=3.9  Score=35.22  Aligned_cols=95  Identities=17%  Similarity=0.181  Sum_probs=63.5

Q ss_pred             cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHh--CCCeEEEEecC-CcHHHHHhcCCCEEEeCC
Q 020314          129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL--GNTHVTATCGA-RNIELVKSLGADEVLDYK  205 (327)
Q Consensus       129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~--~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~  205 (327)
                      .||.....+..| +..++.    -.|++++|.|.+..+|.=...++..  .++.|+..-+. ..++.             
T Consensus       138 ~PcTp~av~~ll-~~~~i~----l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~-------------  199 (284)
T PRK14193        138 LPCTPRGIVHLL-RRYDVE----LAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAA-------------  199 (284)
T ss_pred             CCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHH-------------
Confidence            455555555555 455552    3799999999999999988888876  67777644322 11110             


Q ss_pred             CCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          206 TPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                           ..     +..|+++-++|.+.+ --.+.++++..+|++|...
T Consensus       200 -----~~-----k~ADIvV~AvGkp~~-i~~~~ik~GavVIDvGin~  235 (284)
T PRK14193        200 -----HT-----RRADIIVAAAGVAHL-VTADMVKPGAAVLDVGVSR  235 (284)
T ss_pred             -----HH-----HhCCEEEEecCCcCc-cCHHHcCCCCEEEEccccc
Confidence                 00     347899988887653 3356788888999998654

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=91.02  E-value=0.13  Score=35.70  Aligned_cols=82  Identities=20%  Similarity=0.234  Sum_probs=47.0

Q ss_pred             ChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-------ccccc
Q 020314          164 GAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-------PWSTF  235 (327)
Q Consensus       164 g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-------~~~~~  235 (327)
                      .|.|..+..+++..+.++++++.+ +..+.+++.....-.+....+...+ ....+.+|+|+....-.       .+..+
T Consensus         5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~l-~~~~~sfD~v~~~~~~~~~~~~~~~l~e~   83 (95)
T PF08241_consen    5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAEDL-PFPDNSFDVVFSNSVLHHLEDPEAALREI   83 (95)
T ss_dssp             -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTSS-SS-TT-EEEEEEESHGGGSSHHHHHHHHH
T ss_pred             CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHHhC-ccccccccccccccceeeccCHHHHHHHH
Confidence            347888888888866799999954 5555555433322111111111111 12345799998644321       25677


Q ss_pred             ccccCCCcEEE
Q 020314          236 EPNLGTTGKVI  246 (327)
Q Consensus       236 ~~~l~~~G~~v  246 (327)
                      .+.|+++|+++
T Consensus        84 ~rvLk~gG~l~   94 (95)
T PF08241_consen   84 YRVLKPGGRLV   94 (95)
T ss_dssp             HHHEEEEEEEE
T ss_pred             HHHcCcCeEEe
Confidence            88999999886

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>PRK12937 short chain dehydrogenase; Provisional

Probab=90.96  E-value=0.48  Score=39.66  Aligned_cols=35  Identities=17%  Similarity=0.134  Sum_probs=30.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .++.+++|+|++|++|...++.+...|++++.+.+
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~   37 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYA   37 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC
Confidence            36788999999999999999999989999887764

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=90.95  E-value=0.79  Score=35.94  Aligned_cols=89  Identities=20%  Similarity=0.166  Sum_probs=54.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc---
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP---  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~---  231 (327)
                      +|-+.| .|.+|...++-+...|.+|++..+. ++.+.+.+.|+... ++.   .+..     ...|+||-|+.+..   
T Consensus         3 ~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-~s~---~e~~-----~~~dvvi~~v~~~~~v~   72 (163)
T PF03446_consen    3 KIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-DSP---AEAA-----EQADVVILCVPDDDAVE   72 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-SSH---HHHH-----HHBSEEEE-SSSHHHHH
T ss_pred             EEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-hhh---hhHh-----hcccceEeecccchhhh
Confidence            588899 8999999888888889999988854 56666665563322 111   1111     23589999888632   


Q ss_pred             --ccc--cccccCCCcEEEeecCCchh
Q 020314          232 --WST--FEPNLGTTGKVIDFNPSPRV  254 (327)
Q Consensus       232 --~~~--~~~~l~~~G~~v~~g~~~~~  254 (327)
                        +..  .+..+.++..+|+++..+..
T Consensus        73 ~v~~~~~i~~~l~~g~iiid~sT~~p~   99 (163)
T PF03446_consen   73 AVLFGENILAGLRPGKIIIDMSTISPE   99 (163)
T ss_dssp             HHHHCTTHGGGS-TTEEEEE-SS--HH
T ss_pred             hhhhhhHHhhccccceEEEecCCcchh
Confidence              223  56677788888888765443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK11579 putative oxidoreductase; Provisional

Probab=90.95  E-value=4  Score=36.39  Aligned_cols=132  Identities=11%  Similarity=0.068  Sum_probs=71.9

Q ss_pred             eEEEEcCCChHHH-HHHHH-HHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-c
Q 020314          156 NILITAASGAVGL-YAVQL-AKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-W  232 (327)
Q Consensus       156 ~vlV~g~~g~~G~-~~~~l-a~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~  232 (327)
                      +|.|.| .|.+|. ..+.. .+.-+++++++++.......+.++...+.  .+. .+.+   ....+|+|+-|+.... .
T Consensus         6 rvgiiG-~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~--~~~-~ell---~~~~vD~V~I~tp~~~H~   78 (346)
T PRK11579          6 RVGLIG-YGYASKTFHAPLIAGTPGLELAAVSSSDATKVKADWPTVTVV--SEP-QHLF---NDPNIDLIVIPTPNDTHF   78 (346)
T ss_pred             eEEEEC-CCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHHhhCCCCcee--CCH-HHHh---cCCCCCEEEEcCCcHHHH
Confidence            689999 798986 44444 44457899998854322222334322221  111 1222   2346999999998665 7


Q ss_pred             cccccccCCCcEEEeecCC-c--hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          233 STFEPNLGTTGKVIDFNPS-P--RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       233 ~~~~~~l~~~G~~v~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      +.+..++..+-. |++.-+ .  ............-+++.+.-.+.......++.+-+++++|.|.
T Consensus        79 ~~~~~al~aGkh-Vl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~g~iG  143 (346)
T PRK11579         79 PLAKAALEAGKH-VVVDKPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAEGVLG  143 (346)
T ss_pred             HHHHHHHHCCCe-EEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhcCCCC
Confidence            788888876544 445422 1  1111111112222333333223333445678888889998764

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=90.91  E-value=0.66  Score=38.92  Aligned_cols=34  Identities=12%  Similarity=0.123  Sum_probs=29.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      ++++++|+|++|++|...++.+...|++|+.+.+
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~   38 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYN   38 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcC
Confidence            4788999999999999999888888999887653

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.87  E-value=0.48  Score=39.42  Aligned_cols=35  Identities=23%  Similarity=0.249  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++|+|+++++|...+..+...|++|+.+.++
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~   38 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQ   38 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            56789999999999999998888889999888754

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=90.82  E-value=0.12  Score=42.17  Aligned_cols=95  Identities=18%  Similarity=0.166  Sum_probs=58.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHHHH----HhcCCCEEEeCCCCC-cc----cccCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIELV----KSLGADEVLDYKTPD-GA----ALKSPSGRK  219 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~~~----~~lg~~~v~~~~~~~-~~----~~~~~~~~~  219 (327)
                      .+.++||-.|  +.+|+.++.+|+.+  +++++.+..+ ++.+.+    +..|...-+.....+ .+    .......+.
T Consensus        44 ~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~~~~~  121 (205)
T PF01596_consen   44 TRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDGEEGQ  121 (205)
T ss_dssp             HT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTTTTTS
T ss_pred             cCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhccCCCc
Confidence            5677899998  67899999999876  5799988854 444333    455543212211111 11    111111246


Q ss_pred             ccEEE-eCCCCC---cccccccccCCCcEEEee
Q 020314          220 YDAVI-NCVTGI---PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       220 ~d~v~-d~~g~~---~~~~~~~~l~~~G~~v~~  248 (327)
                      ||+|| |+.-..   .+..++++|+++|.++.=
T Consensus       122 fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D  154 (205)
T PF01596_consen  122 FDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD  154 (205)
T ss_dssp             EEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence            99986 665432   266788899999988743

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=90.80  E-value=0.57  Score=41.83  Aligned_cols=31  Identities=23%  Similarity=0.318  Sum_probs=26.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      .+|||+||+|.+|..+++.+...|.+++++.
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~   32 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVV   32 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEE
Confidence            3699999999999999999998898755443

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=90.77  E-value=3.1  Score=34.68  Aligned_cols=33  Identities=21%  Similarity=0.254  Sum_probs=30.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .+.+|+|.| .|.+|..+++++...|++|+++++
T Consensus        30 ~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D   62 (227)
T cd01076          30 AGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSD   62 (227)
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC
Confidence            678999999 899999999999999999997764

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=90.75  E-value=0.93  Score=37.35  Aligned_cols=95  Identities=12%  Similarity=0.037  Sum_probs=54.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHH-HhcCCCEEE------e-CCCCCc-----ccccCC--
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELV-KSLGADEVL------D-YKTPDG-----AALKSP--  215 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~-~~lg~~~v~------~-~~~~~~-----~~~~~~--  215 (327)
                      .++.+||+.|+  |.|.-++.+|. .|.+|++++ ++.-.+.+ ++.+.....      . +.....     ......  
T Consensus        33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            46678999983  56788888876 699999999 44434432 222221100      0 000000     011111  


Q ss_pred             CCCcccEEEeCCCC---------CcccccccccCCCcEEEeec
Q 020314          216 SGRKYDAVINCVTG---------IPWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       216 ~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g  249 (327)
                      ....+|.|+|+..-         ..+..+.++|+|+|+++.++
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~  152 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLIT  152 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence            12358999997541         12557778999999876654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=90.74  E-value=1.2  Score=37.85  Aligned_cols=89  Identities=10%  Similarity=0.038  Sum_probs=56.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC-
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT-  228 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-  228 (327)
                      +++++||=.|+  |.|..+..+++.. +.+|++++.+ .-.+.+++.+.+.+. .+.   ...  .....||+|+.... 
T Consensus        28 ~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~~-~d~---~~~--~~~~~fD~v~~~~~l   99 (255)
T PRK14103         28 ERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDART-GDV---RDW--KPKPDTDVVVSNAAL   99 (255)
T ss_pred             CCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEEE-cCh---hhC--CCCCCceEEEEehhh
Confidence            67889999984  3467777888765 6799999854 455566554443221 111   111  12346999987543 


Q ss_pred             ----C--CcccccccccCCCcEEEee
Q 020314          229 ----G--IPWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       229 ----~--~~~~~~~~~l~~~G~~v~~  248 (327)
                          .  ..+..+.+.|+|+|+++..
T Consensus       100 ~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103        100 QWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             hhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence                1  1256777899999999764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	327
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		2e-30
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		7e-27
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		1e-21
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		4e-21
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		6e-21
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		3e-18
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		3e-18
3b6z_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Comple		8e-18
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		1e-17
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		2e-17
3gqv_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant		3e-17
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		6e-17
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-16
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-16
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		2e-16
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		2e-15
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		6e-15
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		1e-14
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		2e-14
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		4e-13
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		6e-13
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		2e-12
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		1e-11
3hzz_A	467	2.4 Angstrom Crystal Structure Of Streptomyces Coll		7e-11
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		4e-10
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		8e-10
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		2e-09
1o89_A	345	Crystal Structure Of E. Coli K-12 Yhdh Length = 345		7e-09
4a0s_A	447	Structure Of The 2-Octenoyl-Coa Carboxylase Reducta		1e-08
1xa0_A	328	Crystal Structure Of Mcsg Target Apc35536 From Baci		1e-08
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		2e-08
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		2e-08
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		3e-08
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		3e-08
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		3e-08
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		5e-08
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		5e-08
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		5e-08
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		7e-08
4eye_A	342	Crystal Structure Of A Probable Oxidoreductase From		1e-07
2cf2_D	295	Architecture Of Mammalian Fatty Acid Synthase Lengt		7e-07
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		7e-07
1iyz_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		7e-07
3nx4_A	324	Crystal Structure Of The Yhdh Oxidoreductase From S		9e-07
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		1e-06
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		1e-06
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		1e-06
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		2e-06
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		3e-06
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		6e-06
1tt7_A	330	Crystal Structure Of Bacillus Subtilis Protein Yhfp		8e-06
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		1e-05
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		2e-05
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		7e-05
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		7e-05
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		9e-05
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-04
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-04
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		2e-04
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		5e-04

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/324 (33%), Positives = 161/324 (49%), Gaps = 23/324 (7%)
Query: 9   AVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKG--MLRPFLPRKF 66
           A+Q+D +G     LK V+ P P   K++ L+KV AAS+NPID+K + G   +   L    
Sbjct: 9   AIQFDQFGPPKV-LKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67
Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL----SGGGLAEFAVAKESLTVARPQEVS 122
           P     D +GEVI LGS+V N  +GDKV  +          AE+  A     + + +++S
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCCYAEYVCASPDTIIQKLEKLS 127
Query: 123 AAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVT 182
             + A +P AGLTA QAL Q+  VK     Q   +LI A +G VG  A+QLAK   T V 
Sbjct: 128 FLQAASLPTAGLTALQALNQA-EVK-----QGDVVLIHAGAGGVGHLAIQLAKQKGTTVI 181
Query: 183 ATCGARNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTGIPWSTFEPNLGT 241
            T   RN   +K+LGA++ ++Y   D   A+ +P     DAVI+ V G         L  
Sbjct: 182 TTASKRNHAFLKALGAEQCINYHEEDFLLAISTP----VDAVIDLVGGDVGIQSIDCLKE 237
Query: 242 TGKVIDF-NPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDS 300
           TG ++     +   ++  A +K   +   L  F++    E L +L KLV E KL+  I  
Sbjct: 238 TGCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNI----EELHYLGKLVSEDKLRIEISR 293
Query: 301 KHSLSKAEDAWAKSISGRATGKII 324
              LS+A  A     +G   GK++
Sbjct: 294 IFQLSEAVTAHELLETGHVRGKLV 317

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score =  117 bits (294), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 157/331 (47%), Gaps = 47/331 (14%)
Query: 35  DEALLKVEAASINPIDWKLQKG-------MLRPFLPRK-----FPFIPASDVAGEVIGLG 82
           +E ++KV AAS+NPID  ++ G       M R  L  K     FP     DV+G V+  G
Sbjct: 51  NEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECG 110
Query: 83  SEVKNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139
            +VK FK GD+V A +     G L+EF V   +    +P+ ++  + A +P   LTA  A
Sbjct: 111 LDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSA 170
Query: 140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGAD 199
           + +  G+  D +   K +LI  ASG VG +A+Q+ K  + HVTA C     ELV+ LGAD
Sbjct: 171 INKVGGLN-DKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGAD 229
Query: 200 EVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNL--GTTGKVIDFNPSPRVL-- 255
           +V+DYK+      +  S + +D +++ V G    T+ P+     +G       +P +L  
Sbjct: 230 DVIDYKS-GSVEEQLKSLKPFDFILDNVGGST-ETWAPDFLKKWSGATYVTLVTPFLLNM 287
Query: 256 --------------------LTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK 295
                               L   WK + +   +   F  S  G  LD + +LV  GK++
Sbjct: 288 DRLGIADGMLQTGVTVGSKALKHFWKGVHY---RWAFFMAS--GPCLDDIAELVDAGKIR 342
Query: 296 TVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
            VI+     SK  +A+ K   G A GK ++ 
Sbjct: 343 PVIEQTFPFSKVPEAFLKVERGHARGKTVIN 373

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 158/341 (46%), Gaps = 35/341 (10%)
Query: 3   GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGML--RP 60
           G+ +M AV+   +GG        ++ VP P   + L+KV A  +NP++  ++ G    +P
Sbjct: 26  GQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKP 85
Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS-GGGLAEFAVAKESLTVARPQ 119
            L    P+ P SDVAG +  +G     FK GD+V    +  GG AE+A+A +      P+
Sbjct: 86  LL----PYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPE 141
Query: 120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT 179
           ++   +GA I     TA++AL  S  VK       +++L+  ASG VGL A Q+A+    
Sbjct: 142 KLDFKQGAAIGIPYFTAYRALIHSACVKAG-----ESVLVHGASGGVGLAACQIARAYGL 196
Query: 180 HVTATCGARNIE-LVKSLGADEVLDYKTPDGA-ALKSPSGRK-YDAVINCVTGIPWSTFE 236
            +  T G    + +V   GA EV +++  +    +K   G K  D +I  +  +  S   
Sbjct: 197 KILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDL 256
Query: 237 PNLGTTGKV--------IDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL 288
             L   G+V        I+ NP   +    +   +T        FS S K E   +   L
Sbjct: 257 SLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTL-------FS-STKEEFQQYAAAL 308
Query: 289 ---VKEGKLKTVIDSKHSLSKAEDAWAKSISGR-ATGKIIV 325
              ++ G LK VI S++ L K  +A    I G  ATGK+I+
Sbjct: 309 QAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMIL 349

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 39/350 (11%)
Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV   + GG    L+  ++PVP P   E  ++++AA++N +D  ++KG+  P LP   
Sbjct: 1   MRAVVMRARGGPEV-LEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLP--L 57
Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVV-----------AVLSG--------------- 100
           P +  +D +G V  +G  V+ F  GD+VV             L+G               
Sbjct: 58  PHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHR 117
Query: 101 -GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI 159
            G  AE+ V  E+    +P+ +S  E A IP   LTA Q +   LGV+        ++L+
Sbjct: 118 HGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVR-----PGDDVLV 172
Query: 160 TAASGAVGLYAVQLAKLGNTHVTATCGARN-IELVKSLGADEVLDYKTPD--GAALKSPS 216
            AA   V + A+Q+AKL    V AT G+ + +   K+LGADE ++Y  PD      +   
Sbjct: 173 MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTG 232
Query: 217 GRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS 276
           G+  D V++    + +          G++     S     T  +  + + +  ++  +++
Sbjct: 233 GKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMA 292
Query: 277 PKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
            K      L + V+EGKLK V+     L  A +        R  GK++++
Sbjct: 293 SKSRLFPIL-RFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQ 341

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 23/325 (7%)
Query: 20  AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVI 79
           A L  +E+P P P   + L++V+A S+NP+D+K+++         K   +   D AG V 
Sbjct: 38  ASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWK---VIGYDAAGIVS 94
Query: 80  GLGSEVKNFKVGDKVV---AVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTA 136
            +G +V  F+ GD+V    +++  G  AEF +  E +   +P+ +  AE A +P   +TA
Sbjct: 95  AVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITA 154
Query: 137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIELVK 194
            +A    L V     G    ILI   +G VG  AVQ+A+           +R    E VK
Sbjct: 155 WEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK 214
Query: 195 SLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFE--PNLGTTGK--VIDFNP 250
           SLGA  V+D+  P  A + +  G    A +   T       E    +   G+  +ID +P
Sbjct: 215 SLGAHHVIDHSKPLAAEVAA-LGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLID-DP 272
Query: 251 SPRVLLTFAWK------KLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSL 304
           S   +  F  K      +L F++        S +G  L+ + +LV EG+L+T + ++ S 
Sbjct: 273 SAFDIXLFKRKAVSIHHELXFTRPXFGTPDXSEQGRLLNDVSRLVDEGRLRTTLTNRLSP 332
Query: 305 SKAED---AWAKSISGRATGKIIVE 326
             A +   A A   SG A GK+++E
Sbjct: 333 INAANLKQAHALVESGTARGKVVIE 357

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 153/345 (44%), Gaps = 41/345 (11%)
Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV +D   GG   L   EV  P+P + E LLKV A+++N  D   ++G   P  P   
Sbjct: 7   MLAVHFDK-PGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGA 63
Query: 67  PFIPASDVAGEVIGLGSEVK-NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAE 125
             I   + +G V  LG   + ++K+GD  +A+L GGG A++    E L +  P+ ++  +
Sbjct: 64  SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQ 123
Query: 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKN-ILITAASGAVGLYAVQLAKLGNTHVTAT 184
            A IP A LTA Q L       L G+ Q  + +LI A    VG  A+QL ++       T
Sbjct: 124 AAAIPEAWLTAFQLL------HLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVT 177
Query: 185 CGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT 241
            G+ + +++ + LGA    +YK  D   A LK   G   + +++C+ G  W      L  
Sbjct: 178 AGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLAL 237
Query: 242 TGKVI--------DFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENL----------D 283
            G+ +        D N          + KL F +  L+   +  +               
Sbjct: 238 DGRWVLYGLMGGGDINGP-------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQ 290
Query: 284 FLVKLVKEG--KLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
            L     EG  +L  V+D  + +++ ++A     + +  GKI++E
Sbjct: 291 ILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLE 335

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 153/345 (44%), Gaps = 41/345 (11%)
Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV +D   GG   L   EV  P+P + E LLKV A+++N  D   ++G   P  P   
Sbjct: 23  MLAVHFDK-PGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGA 79
Query: 67  PFIPASDVAGEVIGLGSEVK-NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAE 125
             I   + +G V  LG   + ++K+GD  +A+L GGG A++    E L +  P+ ++  +
Sbjct: 80  SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQ 139
Query: 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKN-ILITAASGAVGLYAVQLAKLGNTHVTAT 184
            A IP A LTA Q L       L G+ Q  + +LI A    VG  A+QL ++       T
Sbjct: 140 AAAIPEAWLTAFQLL------HLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVT 193
Query: 185 CGA-RNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT 241
            G+ + +++ + LGA    +YK  D   A LK   G   + +++C+ G  W      L  
Sbjct: 194 AGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLAL 253
Query: 242 TGKVI--------DFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENL----------D 283
            G+ +        D N          + KL F +  L+   +  +               
Sbjct: 254 DGRWVLYGLMGGGDINGP-------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQ 306
Query: 284 FLVKLVKEG--KLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
            L     EG  +L  V+D  + +++ ++A     + +  GKI++E
Sbjct: 307 ILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLE 351

>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371

Iteration: 1
 Score = 87.8 bits (216), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Query: 28  PVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN 87
           P P   +D+  ++VEA +INP D K++     P+      F+  +D AG V+ +GS+V +
Sbjct: 30  PCPMLPRDQVYVRVEAVAINPSDTKMRGQFATPWA-----FL-GTDYAGTVVAVGSDVTH 83
Query: 88  FKVGDKVVAVLS--------GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139
            +VGD+V    +         G  +++ V +  +    P+ +S  + A +P AG++    
Sbjct: 84  IQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALP-AGISTAGL 142
Query: 140 LTQSLGVKLDGSGQQK--------NILITAASGAVGLYAVQLAKLGNTHVTATCGARNIE 191
             + LG+ L      +         +L+   S A     +Q+ +L      ATC   N +
Sbjct: 143 AMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFD 202
Query: 192 LVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVINCVTGIPWSTF-EPNLGTT-GKVIDF 248
           L KS GA+EV DY+ P+ A  +++ +       ++C+T +  +TF    +G   G  +  
Sbjct: 203 LAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSL 262
Query: 249 NPSP-----RVLLTFAW 260
           NP P     R ++T  W
Sbjct: 263 NPFPEHAATRKMVTTDW 279

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 12/190 (6%)
Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81
            K   + +P P   E L+K+++ S+NP+D K Q+ M     PR   F    D  G V  +
Sbjct: 20  FKTFNLDIPEPKVHEILVKIQSISVNPVDTK-QRLMDVSKAPRVLGF----DAIGVVESV 74
Query: 82  GSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ 138
           G+EV  F  GD V    S    G  AE+ +  E L    P+ +SA +   +P  G+TA++
Sbjct: 75  GNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYE 134
Query: 139 ALTQSLGVKLDGSGQQ-KNILITAASGAVGLYAVQLAKLGNTHVTATCGARN--IELVKS 195
            L    G+  + +  + K +LI   +G VG  A Q+AK     V  T  +RN  IE  K 
Sbjct: 135 TLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTA-SRNETIEWTKK 193
Query: 196 LGADEVLDYK 205
           +GAD VL++K
Sbjct: 194 MGADIVLNHK 203

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 18/290 (6%)
Query: 30  PTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFK 89
           P P   + L+++EA+  NP+D K++ G   P   +  P I   D+AG V+ +G EV +F+
Sbjct: 28  PQPAPGQVLVQIEASGTNPLDAKIRAGEA-PHAQQPLPAILGXDLAGTVVAVGPEVDSFR 86
Query: 90  VGDKVVAVLSG-GGL----AEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSL 144
           VGD V  +  G GGL    A+FA     L  ++P  ++  + + +P   +TA + L    
Sbjct: 87  VGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTXRQASVLPLVFITAWEGLVDRA 146
Query: 145 GVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDY 204
            V+ DG    + +LI    G VG  A+Q+A      V AT    ++E V+ LGA  +   
Sbjct: 147 QVQ-DG----QTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLEYVRDLGATPIDAS 201
Query: 205 KTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVID-FNPSPRVLLTFAWKKL 263
           + P+  A +  +G+ +D V + + G         +   G V+         L   ++K+ 
Sbjct: 202 REPEDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWGTHKLAPLSFKQA 261
Query: 264 TFS-----KKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAE 308
           T+S        L    ++  GE L     LV+ GKL   +D + + S AE
Sbjct: 262 TYSGVFTLHTLLANEGLAHFGEXLREADALVQTGKLAPRLDPR-TFSIAE 310

>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 31/257 (12%)
Query: 28  PVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN 87
           P P   +D+  ++VEA +INP D  ++     P+      F+  +D AG V+ +GS+V +
Sbjct: 30  PCPMLPRDQVYVRVEAVAINPSDTSMRGQFATPWA-----FL-GTDYAGTVVAVGSDVTH 83
Query: 88  FKVGDKVVAVLS--------GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA 139
            +VGD+V    +         G  +++ V +  +    P+ +S  + A +P AG++    
Sbjct: 84  IQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALP-AGISTAGL 142
Query: 140 LTQSLGVKLDGSGQQK--------NILITAASGAVGLYAVQLAKLGNTHVTATCGARNIE 191
             + LG+ L      +         +L+   S A     +Q+ +L      ATC   N +
Sbjct: 143 AMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFD 202
Query: 192 LVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVINCVTGIPWSTF-EPNLGTT-GKVIDF 248
           L KS GA+EV DY+ P+ A  +++ +       ++C+T +  +TF    +G   G  +  
Sbjct: 203 LAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSL 262
Query: 249 NPSP-----RVLLTFAW 260
           NP P     R ++T  W
Sbjct: 263 NPFPEHAATRKMVTTDW 279

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 140/316 (44%), Gaps = 35/316 (11%)
Query: 28  PVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN 87
           P+P   + E L++ EA  +N  D   ++G   P  P+    I   +++GE++G+G  V  
Sbjct: 49  PLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP--PKDASPILGLELSGEIVGVGPGVSG 106
Query: 88  FKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVK 147
           + VGDKV  + +GG  AE+ +      +  P+   A + A +P    T    L Q  G+ 
Sbjct: 107 YAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQXAGLT 166
Query: 148 LDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKT 206
                + +++LI   +  +G  A+QLA+     V AT G+    E  + LGA   ++Y++
Sbjct: 167 -----EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRS 221
Query: 207 PDGAA-LKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK-----VIDF---------NPS 251
            D AA +K+ +G+  D +++ +     + FE N+ +  K     +I F         N S
Sbjct: 222 EDFAAVIKAETGQGVDIILDXIGA---AYFERNIASLAKDGCLSIIAFLGGAVAEKVNLS 278
Query: 252 PRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVK----LVKEGKLKTVIDSKHSLSKA 307
           P        K+LT +     P +   K    D L+     L++ G +  VI    +    
Sbjct: 279 P-----IXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDV 333
Query: 308 EDAWAKSISGRATGKI 323
            DA      G   GK+
Sbjct: 334 ADAHRLLEEGSHVGKV 349

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 13/224 (5%)
Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG-SE 84
           + PVP P   + L++     +N  D     G   P +  K PF    +  GEV+ LG S 
Sbjct: 24  DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSV--KPPFDIGFEGIGEVVALGLSA 81
Query: 85  VKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSL 144
              + VG + VA ++ G  AE+ V   S  +A P      E   +  +G TA+ +L +  
Sbjct: 82  SARYTVG-QAVAYMAPGSFAEYTVVPAS--IATPVPSVKPEYLTLLVSGTTAYISLKE-- 136
Query: 145 GVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLD 203
              L G  + K +L+TAA+G  G +A+QL+K    HV  TC +      +KSLG D  ++
Sbjct: 137 ---LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPIN 193
Query: 204 YKT-PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI 246
           YKT P G  LK       D V   V G  +      L T G++I
Sbjct: 194 YKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLI 237

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 13/224 (5%)
Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG-SE 84
           + PVP P   + L++     +N  D     G   P +  K PF    +  GEV+ LG S 
Sbjct: 53  DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSV--KPPFDIGFEGIGEVVALGLSA 110
Query: 85  VKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSL 144
              + VG + VA ++ G  AE+ V   S  +A P      E   +  +G TA+ +L +  
Sbjct: 111 SARYTVG-QAVAYMAPGSFAEYTVVPAS--IATPVPSVKPEYLTLLVSGTTAYISLKE-- 165
Query: 145 GVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLD 203
              L G  + K +L+TAA+G  G +A+QL+K    HV  TC +      +KSLG D  ++
Sbjct: 166 ---LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPIN 222
Query: 204 YKT-PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI 246
           YKT P G  LK       D V   V G  +      L T G++I
Sbjct: 223 YKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLI 266

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 104/224 (46%), Gaps = 13/224 (5%)
Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG-SE 84
           + PVP P   + L++     +N  D     G   P +  K PF    +  GEV+ LG S 
Sbjct: 45  DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSV--KPPFDIGFEGIGEVVALGLSA 102
Query: 85  VKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSL 144
              + VG + VA ++ G  AE+ V   S  +A P      E   +  +G TA+ +L +  
Sbjct: 103 SARYTVG-QAVAYMAPGSFAEYTVVPAS--IATPVPSVKPEYLTLLVSGTTAYISLKE-- 157
Query: 145 GVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLD 203
              L G  + K +L+TAA+G  G +A+QL+K    HV  TC +      +KSLG D  ++
Sbjct: 158 ---LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPIN 214
Query: 204 YKT-PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI 246
           YKT P G  LK       D V   V G  +      L T G++I
Sbjct: 215 YKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLI 258

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 35/213 (16%)
Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPID-WKLQKGMLRPFLPRKFPFIPASDVAGEVIG 80
           LK  E PVP   + + +++  A S+N  D   L+ G     L   FPF+PASD +G V  
Sbjct: 41  LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGX---GLDLAFPFVPASDXSGVVEA 97
Query: 81  LGSEVKNFKVGDKVVAVLSGGG------------------------LAEFAVAKESLTVA 116
           +G  V  F+ GD+V++  + G                         L+E+ V  E   VA
Sbjct: 98  VGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVA 157
Query: 117 RPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL 176
            P+ + AAE + +PCAGLTA  AL +       G  +  + ++   +G V L+ +Q+AK 
Sbjct: 158 APKSLDAAEASTLPCAGLTAWFALVEK------GHLRAGDRVVVQGTGGVALFGLQIAKA 211
Query: 177 GNTHVTATCGARN-IELVKSLGADEVLDYKTPD 208
               V  T  +R  ++   +LGAD  ++    D
Sbjct: 212 TGAEVIVTSSSREKLDRAFALGADHGINRLEED 244

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 144/332 (43%), Gaps = 25/332 (7%)
Query: 10  VQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGML-RPFLPRKFPF 68
           +Q+ + GG    L++V+     P     +++ +A  +N ID   + G+   PFLP     
Sbjct: 5   IQFSTVGGPEV-LEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGL-- 61
Query: 69  IPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG--GGLAEFAVAKESLTVARPQEVSAAEG 126
              ++ AG V  +G EV  FKVGD+ VA  +G  G  +E  V  E+  V     VS  + 
Sbjct: 62  --GAEGAGVVEAVGDEVTRFKVGDR-VAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQA 118
Query: 127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHVTATC 185
           A +   GLT    L Q+  VK       + IL  AA+G VG  A Q AK LG   +    
Sbjct: 119 AALMLKGLTVQYLLRQTYQVK-----PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS 173
Query: 186 GARNIELVKSLGADEVLDYKTPDGA--ALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243
                   K+LGA E +DY   D A   L+   G+K   V + V    W T   ++   G
Sbjct: 174 SPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRG 233
Query: 244 KVIDF----NPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENL----DFLVKLVKEGKLK 295
            V+ F     P   V L    +K +    +    S +   +NL    D L  ++  GKLK
Sbjct: 234 LVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLK 293
Query: 296 TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
                +++L  A  A  +  + R TG  I+ P
Sbjct: 294 VDGIEQYALKDAAKAQIELSARRTTGSTILIP 325

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 30/327 (9%)
Query: 17  GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAG 76
           GG   +K+ + PVP+ +++E L+K +   +N I+   +KG+     P + P++   + +G
Sbjct: 18  GGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIY----PCEKPYVLGREASG 73
Query: 77  EVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAG--- 133
            V+  G  V NF+VGD+ VA +S    A+++       V +  + ++ E   +  AG   
Sbjct: 74  TVVAKGKGVTNFEVGDQ-VAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQ 132
Query: 134 -LTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE 191
            LTA     ++  VK     +   +L+ AA+G VGL   QL K+   H  A       ++
Sbjct: 133 VLTALSFTNEAYHVK-----KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK 187
Query: 192 LVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT---TGKVI 246
           + K  GA+ +++    D     LK  +G+  DA  + V      TFE +L      G  +
Sbjct: 188 IAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK---DTFEISLAALKRKGVFV 244
Query: 247 DF-NPS----PRVLLTFAWKKLTFSKKQLVPFSVSPKGENL--DFLVKLVKEGKLKTVID 299
            F N S    P  +   + K +T  + QL  +   P+      D    LV   KL   I 
Sbjct: 245 SFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIY 304
Query: 300 SKHSLSKAEDAWAKSISGRATGKIIVE 326
             + L     A A   S +  GK+++E
Sbjct: 305 KTYPLRDYRTAAADIESRKTVGKLVLE 331

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 142/341 (41%), Gaps = 43/341 (12%)
Query: 17  GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAG 76
           GG+  L+     +P P   E  ++V+A  +N ID  +++G +    P K P +P  + +G
Sbjct: 13  GGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDN--PPKTPLVPGFECSG 70
Query: 77  EVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTA 136
            V  LG  VK +++GD+V+A ++    AE            P ++S +E A  P   +TA
Sbjct: 71  IVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTA 130
Query: 137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL-AKLGNTHVTATCGARNIELVKS 195
           +  L +   ++     +  ++L+ +A G VG    QL + + N  V  T      E +K 
Sbjct: 131 YVMLFEVANLR-----EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKD 185
Query: 196 LGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRV- 254
                + D        +K  S    D V++C+ G         L   G  I +  S  V 
Sbjct: 186 -SVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVT 244
Query: 255 -----LLTFA---WK-------KLTFSKKQLVPFSVSPKGENLDF--------------L 285
                  +FA   W+       KL    K +  FS+     NL F              L
Sbjct: 245 GETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLL----NLLFKQGRAGLIRGVVEKL 300
Query: 286 VKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
           + L  + K+K V+DS  +L + ++A  +       GK+I++
Sbjct: 301 IGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILD 341

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 144/334 (43%), Gaps = 42/334 (12%)
Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81
           LK  EV  PT +  E L++++A  +   D     G   P  P K P IP  +  G V  +
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDW-PVKP-KLPLIPGHEGVGIVEEV 70
Query: 82  GSEVKNFKVGDKV------------VAVLSG----------------GGLAEFAVAKESL 113
           G  V + KVGD+V               LSG                GG AE+  A    
Sbjct: 71  GPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY 130
Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
            V  P  +S  E A I CAG+T ++AL      K+ G+   + + I    G +G  AVQ 
Sbjct: 131 VVKIPDNLSFEEAAPIFCAGVTTYKAL------KVTGAKPGEWVAIYGI-GGLGHVAVQY 183
Query: 174 AK-LGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAA-LKSPSGRKYDAVINCVTGIP 231
           AK +G   V    G   +EL K LGAD V++    D A  +K   G  + AV+  V+   
Sbjct: 184 AKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243
Query: 232 WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE 291
           + +   ++   G  +     P  +    +  +    K  +  S+    ++L   ++   E
Sbjct: 244 FQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIK--IIGSIVGTRKDLQEALQFAAE 301
Query: 292 GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
           GK+KT+I+ +  L K  + + + + G+  G++++
Sbjct: 302 GKVKTIIEVQ-PLEKINEVFDRMLKGQINGRVVL 334

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 143/334 (42%), Gaps = 42/334 (12%)
Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81
           LK  EV  PT +  E L++++A  +   D     G   P  P K P IP  +  G V  +
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDW-PVKP-KLPLIPGHEGVGIVEEV 70
Query: 82  GSEVKNFKVGDKV------------VAVLSG----------------GGLAEFAVAKESL 113
           G  V + KVGD+V               LSG                GG AE+  A    
Sbjct: 71  GPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY 130
Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
            V  P  +S  E A I CAG+T ++AL      K+ G+   + + I    G  G  AVQ 
Sbjct: 131 VVKIPDNLSFEEAAPIFCAGVTTYKAL------KVTGAKPGEWVAIYGI-GGFGHVAVQY 183
Query: 174 AK-LGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAA-LKSPSGRKYDAVINCVTGIP 231
           AK +G   V    G   +EL K LGAD V++    D A  +K   G  + AV+  V+   
Sbjct: 184 AKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243
Query: 232 WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE 291
           + +   ++   G  +     P  +    +  +    K  +  S+    ++L   ++   E
Sbjct: 244 FQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIK--IIGSIVGTRKDLQEALQFAAE 301
Query: 292 GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
           GK+KT+I+ +  L K  + + + + G+  G++++
Sbjct: 302 GKVKTIIEVQ-PLEKINEVFDRMLKGQINGRVVL 334

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 147/348 (42%), Gaps = 55/348 (15%)
Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF-----LPRKFPFIPASDVAG 76
           LK  ++P+P P   + L+K+EAA +   D  +++G          L  K P     ++AG
Sbjct: 13  LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 77  EVIGLGSEVKNFKVGDKV---------------------------VAVLSGGGLAEFAVA 109
            +  +G EV  +  GD V                           + +   G  AE+ + 
Sbjct: 73  RIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYVLV 132
Query: 110 KESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLY 169
                + + + +SA E A + C+G+T ++A+ ++    LD S   K +++  A G +G  
Sbjct: 133 PHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKA---SLDPS---KTLVVIGAGGGLGTM 186
Query: 170 AVQLAKL--GNTHVTATCGARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVIN 225
           A+Q+AK   G T +        +E  K  GAD V++  + D  +   +   G+  DAVI+
Sbjct: 187 AIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVID 246
Query: 226 CVTGIPWSTFEPN-LGTTGKVID---FNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGEN 281
                   +  P  L   GK +    F       L +    +T ++ Q +   V   G  
Sbjct: 247 LNNSEKTLSIYPYVLAKQGKYVMVGLFGAD----LKYHAPLITLNEVQFIGSLV---GNQ 299
Query: 282 LDFL--VKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
            DFL  + L + GK+K ++     L +A +A     + +A G+ ++ P
Sbjct: 300 SDFLGIMSLAEAGKVKPMVTKTMKLEEANEAIDNLENFKAVGRQVLVP 347

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 66/357 (18%)
Query: 12  YDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPA 71
           Y+S+G     L++ ++PVP P  +E L+ V+ + +   D     G     LP K P +  
Sbjct: 12  YESHGK----LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWP--LPVKLPLVGG 65
Query: 72  SDVAGEVIGLGSEVKNFKVGDKV------------------------VAVLSG----GGL 103
            + AG V+G+G  VK +K+GD                           A LSG    G  
Sbjct: 66  HEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSF 125
Query: 104 AEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS 163
            ++A A        PQ    A+ A I CAG+T ++AL  +  +    +G    + I+ A+
Sbjct: 126 QQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLM----AGHW--VAISGAA 179
Query: 164 GAVGLYAVQLAK-LGNTHVTATCGARNIELVKSLGADEVLDY-KTPD--GAALKSPSGRK 219
           G +G  AVQ AK +G   +    G    EL +S+G +  +D+ K  D  GA LK+  G  
Sbjct: 180 GGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGA 239
Query: 220 YDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKG 279
           +  VIN       S  E  +  + + +  N +  ++   A  K        V  S+S  G
Sbjct: 240 H-GVINV------SVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVG 292
Query: 280 ----------ENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
                     E LDF  + + +  +K V      LS   + + K   G+  G+ +V+
Sbjct: 293 SYVGNRADTREALDFFARGLVKSPIKVV-----GLSTLPEIYEKMEKGQIVGRYVVD 344

>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 46/221 (20%)
Query: 26  EVPVPTPNKDEALLKVEAASIN----------PID---WKLQKGMLRPFLPRK-FPF-IP 70
           EVPVP     EAL+ V A+S+N          P+    +  + G L P   R   P+ I 
Sbjct: 80  EVPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLPYHII 139
Query: 71  ASDVAGEVIGLGSEVKNFKVGDKVVAVL---------------------------SGGGL 103
            SD+AG V+  G  V  ++ GD+VVA                             + GGL
Sbjct: 140 GSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETNFGGL 199
Query: 104 AEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS 163
           AE A+ K +  + +P+ ++  E A       TA++ L    G  +    Q  N+LI  AS
Sbjct: 200 AEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMK---QGDNVLIWGAS 256
Query: 164 GAVGLYAVQLAKLGNTH-VTATCGARNIELVKSLGADEVLD 203
           G +G YA Q A  G  + +      +  E+ +S+GA+ ++D
Sbjct: 257 GGLGSYATQFALAGGANPICVVSSPQKAEICRSMGAEAIID 297

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 97/231 (41%), Gaps = 41/231 (17%)
Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A    +YG   A L+  EV VP P   + L+K+EA+ +   D    +G   P  P   
Sbjct: 7   MKAAVVHAYG---APLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDW-PVKP-PL 61
Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKV------------VAVLSG-------------- 100
           PFIP  +  G V  +GS V   K GD+V               L+G              
Sbjct: 62  PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYS 121
Query: 101 --GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNIL 158
             GG AE+ +A  +     P+ V  AE A I CAG+T ++ L Q+       + +    +
Sbjct: 122 VNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQT-------NARPGQWV 174
Query: 159 ITAASGAVGLYAVQLAKLGNTHVTAT-CGARNIELVKSLGADEVLDYKTPD 208
             +  G +G  AVQ A+    HV A       +EL + LGA   ++ +  D
Sbjct: 175 AISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQED 225

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 50/223 (22%)
Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP-----FLPR-----------KFPF- 68
           +VPVP     EAL+ V A+S+N     +   +  P     FL R             P+ 
Sbjct: 62  DVPVPELGPGEALVAVMASSVNYN--SVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYH 119
Query: 69  IPASDVAGEVIGLGSEVKNFKVGDKVVAVL---------------------------SGG 101
           +  SD+AG V+  G  V  ++ GD+VVA                             + G
Sbjct: 120 VIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFG 179
Query: 102 GLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA 161
           GLAE A+ K +  + +P  +S  E A       TA++ L    G    G  Q  N+LI  
Sbjct: 180 GLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGA---GMKQGDNVLIWG 236
Query: 162 ASGAVGLYAVQLAKLGNTH-VTATCGARNIELVKSLGADEVLD 203
           ASG +G YA Q A  G  + +      +  E+ +++GA+ ++D
Sbjct: 237 ASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIID 279

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 17  GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAG 76
           GG   L+ VE     P ++E  ++ +A  IN ID  ++ G+   + P   P    ++ AG
Sbjct: 11  GGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGL---YPPPSLPSGLGTEAAG 67
Query: 77  EVIGLGSEVKNFKVGDKVVAVLSG-GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLT 135
            V  +GS VK+ K GD+VV   S  G  +             P  +S  + A     GLT
Sbjct: 68  IVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLT 127
Query: 136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK 194
            +  L ++  +K D     +  L  AA+G VGL A Q AK     +  T G A+  +   
Sbjct: 128 VYYLLRKTYEIKPD-----EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL 182
Query: 195 SLGADEVLDYKTPDGAA-LKSPS-GRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS 251
             GA +V++Y+  D    LK  + G+K   V + V    W      L   G ++ F  S
Sbjct: 183 KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNS 241

>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh Length = 345

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 69/149 (46%), Gaps = 17/149 (11%)
Query: 64  RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG------GGLAEFAVAKESLTVAR 117
           R FP IP  D AG V    SE   F  G +V+    G      GGLAE A  K    VA 
Sbjct: 76  RNFPMIPGIDFAGTV--RTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAM 133
Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSG---QQKNILITAASGAVGLYAVQ-L 173
           PQ + A +   I  AG TA   +     + L+ +G   Q   I++T ASG VG  AV  L
Sbjct: 134 PQGLDARKAMIIGTAGFTAMLCV-----MALEDAGVRPQDGEIVVTGASGGVGSTAVALL 188
Query: 174 AKLGNTHVTATCGARNIELVKSLGADEVL 202
            KLG   V  +      E +KSLGA  VL
Sbjct: 189 HKLGYQVVAVSGRESTHEYLKSLGASRVL 217

>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 95/228 (41%), Gaps = 52/228 (22%)
Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF--------------- 66
           L+  EVP+P    DE L+ V A+SIN     +   M  P     F               
Sbjct: 50  LRLGEVPMPELAPDEVLVAVMASSINYN--TVWSAMFEPIPTFHFLKQNARQGGWATRHD 107
Query: 67  -PF-IPASDVAGEVIGLGSEVKNFKVGDKVVA---------------------------V 97
            P+ +  SD +G V+  G  V+ +K GD V+                             
Sbjct: 108 QPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFE 167
Query: 98  LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIP-CAGLTAHQALTQSLGVKLDGSGQQKN 156
            + GGLAE+ V + S  + +P  ++  E A  P CAG TA++ L    G ++    Q   
Sbjct: 168 TNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAG-TAYRMLVSDRGAQMK---QGDI 223
Query: 157 ILITAASGAVGLYAVQLAKL-GNTHVTATCGARNIELVKSLGADEVLD 203
           +LI  ASG +G YA+Q  K  G   V     A+    V++LG D V++
Sbjct: 224 VLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVIN 271

>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVA------VLSGGGLAEFAVAKESLTVARPQE 120
           PF+P  D+AG V+   S+   F+ GD+V+A      V   GG +E+A       V  P+ 
Sbjct: 61  PFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKG 118
Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSG---QQKNILITAASGAVGLYAVQ-LAKL 176
           ++  E   I  AG TA  ++      +L+  G   ++  +L+T A+G VG  AV  LAK 
Sbjct: 119 LTLKEAXAIGTAGFTAALSIH-----RLEEHGLTPERGPVLVTGATGGVGSLAVSXLAKR 173
Query: 177 GNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWST 234
           G T   +T  A   + ++ LGA EVL  +      ++    +++ A ++ V G   +T
Sbjct: 174 GYTVEASTGKAAEHDYLRVLGAKEVLAREDVXAERIRPLDKQRWAAAVDPVGGRTLAT 231

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 146/344 (42%), Gaps = 55/344 (15%)
Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF-----LPRKFPFIPASDVAGEVIG 80
           E+ VP P   + L+KVEAA +   D  +++G          L  K P     ++AG++  
Sbjct: 17  EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEE 76
Query: 81  LGSEVKNFKVGDKV-VAVLSG--------------------------GGLAEFAVAKESL 113
           +G EV  +  GD V V  L G                          G  AE+ +     
Sbjct: 77  VGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYK 136
Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
            + + + ++A E A + C+G+T ++A+ ++    LD +   K +L+  A G +G  AVQ+
Sbjct: 137 YMYKLRRLNAVEAAPLTCSGITTYRAVRKA---SLDPT---KTLLVVGAGGGLGTMAVQI 190
Query: 174 AKL--GNTHVTATCGARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINC-VT 228
           AK   G T +        +E  K  GAD V++    D  A   +    +  DAVI+   +
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYS 250
Query: 229 GIPWSTFEPNLGTTGKVID---FNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFL 285
               S +   L   GK +    F       L +    +T S+ Q V   V   G   DFL
Sbjct: 251 EKTLSVYPKALAKQGKYVMVGLFGAD----LHYHAPLITLSEIQFVGSLV---GNQSDFL 303
Query: 286 --VKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
             ++L + GK+K +I     L +A +A     + +A G+ ++ P
Sbjct: 304 GIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 141/335 (42%), Gaps = 55/335 (16%)
Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEV--- 78
              VE P+  P + + L+K E  S++P         +R ++     +IP   + GEV   
Sbjct: 26  FSFVETPLGEPAEGQILVKNEYLSLDP--------AMRGWMNDARSYIPPVGI-GEVMRA 76
Query: 79  IGLG----SEVKNFKVGDKVVAVLSGGGLAEFAVAK-------ESLTVARPQEVSAAEGA 127
           +G+G    S+   F+ GD V   L   G+ ++ + +       +      P+ +SA    
Sbjct: 77  LGVGKVLVSKHPGFQAGDYVNGAL---GVQDYFIGEPKGFYKVDPSRAPLPRYLSA---- 129
Query: 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKN---ILITAASGAVGLYAVQLAKLGNTHVTAT 184
            +   G+TA+ AL       LD  GQ KN   ++I+ A+GAVG  A Q+A+L    V   
Sbjct: 130 -LGMTGMTAYFAL-------LD-VGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGI 180
Query: 185 CGA--RNIELVKSLGADEVLDYKTPDGAA-LKSPSGRKYDAVINCVTGIPWST------F 235
            G   +   LV+ LG D  +DYK  D AA LK    +  D   + V G    T      F
Sbjct: 181 AGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAF 240
Query: 236 EPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKG----ENLDFLVKLVKE 291
           +  +   G +  +N    V     +  L  ++ ++    V        E L  +   + E
Sbjct: 241 KARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAE 300
Query: 292 GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
           GKL++  D    L    +   K  SG   GK++++
Sbjct: 301 GKLQSREDIVEGLETFPETLLKLFSGENFGKLVLK 335

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 145/344 (42%), Gaps = 55/344 (15%)
Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF-----LPRKFPFIPASDVAGEVIG 80
           E+ VP P   + L+KVEAA +   D  +++G          L  K P     ++AG++  
Sbjct: 17  EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEE 76
Query: 81  LGSEVKNFKVGDKV---------------------------VAVLSGGGLAEFAVAKESL 113
           +G EV  +  GD V                           + +   G  AE+ +     
Sbjct: 77  VGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYK 136
Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
            + + + ++A E A + C+G+T ++A+ ++    LD +   K +L+  A G +G  AVQ+
Sbjct: 137 YMYKLRRLNAVEAAPLTCSGITTYRAVRKA---SLDPT---KTLLVVGAGGGLGTMAVQI 190
Query: 174 AKL--GNTHVTATCGARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINC-VT 228
           AK   G T +        +E  K  GAD V++    D  A   +    +  DAVI+   +
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYS 250
Query: 229 GIPWSTFEPNLGTTGKVID---FNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFL 285
               S +   L   GK +    F       L +    +T S+ Q V   V   G   DFL
Sbjct: 251 EKTLSVYPKALAKQGKYVMVGLFGAD----LHYHAPLITLSEIQFVGSLV---GNQSDFL 303
Query: 286 --VKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
             ++L + GK+K +I     L +A +A     + +A G+ ++ P
Sbjct: 304 GIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 28/234 (11%)
Query: 27  VPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFP--FIPASDVAGEVIGLGSE 84
           V +P    D+ L++ +A  INP+DWK  K       P  +    +P  D AG ++ +G++
Sbjct: 22  VDIPALAADDILVQNQAIGINPVDWKFIKAN-----PINWSNGHVPGVDGAGVIVKVGAK 76
Query: 85  VKNFKVGDKV---VAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALT 141
           V +  +G +V    ++   G  AEF V         P  +S    A +PC  LTA QA  
Sbjct: 77  VDSKXLGRRVAYHTSLKRHGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFE 136
Query: 142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEV 201
           +    K      Q+ +LI    GAV     Q        V     + +  L    G   +
Sbjct: 137 KIPLTK------QREVLIV-GFGAVNNLLTQXLNNAGYVVDLVSASLSQALAAKRGVRHL 189
Query: 202 LDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI---DFNPSP 252
             Y+ P      S   +KY A+ + V     +   P+L   G +I   D  P+P
Sbjct: 190 --YREP------SQVTQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDRIPAP 235

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 143/359 (39%), Gaps = 59/359 (16%)
Query: 5   AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPR 64
           A+M A    ++G   A L   EVPVP P   +  +K+EA+ +   D     G   P  P 
Sbjct: 1   AMMKAAVVRAFG---APLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDW-PVKP- 55
Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKVVA------------VLSG------------ 100
             PFIP  +  G V  +GS V   K GD+V               L G            
Sbjct: 56  TLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTG 115
Query: 101 ----GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKN 156
               GG  E+ VA  +     P +V   E A I CAG+T ++      G+K+  +   + 
Sbjct: 116 YSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYK------GLKVTDTRPGQW 169
Query: 157 ILITAASGAVGLYAVQLAKLGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGAA-LKS 214
           ++I+   G +G  AVQ A+     V A       + L + LGA+  ++ +  D AA L+ 
Sbjct: 170 VVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQK 228
Query: 215 PSGRKYDAVINCVTGIPWSTFEPNLGTT--GKVIDFNPSP-----RVLLTFAWKKLTFSK 267
             G  +  +   VT +    F   +G    G  I  N  P       +     K +T   
Sbjct: 229 EIGGAHGVL---VTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITI-- 283
Query: 268 KQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
           +  +  + S   E+LDF       G +K  + S   L    D + +   G+  G+++++
Sbjct: 284 RGSIVGTRSDLQESLDF----AAHGDVKATV-STAKLDDVNDVFGRLREGKVEGRVVLD 337

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 144/344 (41%), Gaps = 55/344 (15%)
Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF-----LPRKFPFIPASDVAGEVIG 80
           E+ VP P   + L+KVEAA +   D  +++G          L  K P     ++AG++  
Sbjct: 17  EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEE 76
Query: 81  LGSEVKNFKVGDKV---------------------------VAVLSGGGLAEFAVAKESL 113
           +G EV  +  GD V                           + +   G  AE+ +     
Sbjct: 77  VGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYK 136
Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
            + + + ++A E A + C+G+T ++A+ ++    LD +   K +L+  A G +G  AVQ+
Sbjct: 137 YMYKLRRLNAVEAAPLTCSGITTYRAVRKA---SLDPT---KTLLVVGAGGGLGTMAVQI 190
Query: 174 AKL--GNTHVTATCGARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTG 229
           AK   G T +        +E  K  GAD V++    D  A   +    +  DAVI+    
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNS 250
Query: 230 -IPWSTFEPNLGTTGKVID---FNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFL 285
               S +   L   GK +    F       L +    +T S+ Q V   V   G   DFL
Sbjct: 251 EKTLSVYPKALAKQGKYVMVGLFGAD----LHYHAPLITLSEIQFVGSLV---GNQSDFL 303
Query: 286 --VKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
             ++L + GK+K +I     L +A +A     + +A G+ ++ P
Sbjct: 304 GIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 17  GGVAGLKHVEVPVPT-PNKD-EALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPA--S 72
           G + GL  V+ P  T P  D E  + + AA +N  D  +  GM        +P + +  S
Sbjct: 219 GSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGM--------YPGVASLGS 270
Query: 73  DVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCA 132
           + AG V+  G  V     GD+V+ ++        AVA   +    P   S A  A +P  
Sbjct: 271 EGAGVVVETGPGVTGLAPGDRVMGMIPKA-FGPLAVADHRMVTRIPAGWSFARAASVPIV 329
Query: 133 GLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA---RN 189
            LTA+ AL     V L G    +++L+ +A+G VG+ A+QLA+     V AT      + 
Sbjct: 330 FLTAYYAL-----VDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQA 384
Query: 190 IELVKS-LGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229
           +EL +  L +    D++      L +  GR  D V+N + G
Sbjct: 385 VELSREHLASSRTCDFEQ---QFLGATGGRGVDVVLNSLAG 422

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 38/210 (18%)
Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85
           EVP+P P   +  + ++A+ +   D    +G   P  P   PFIP  +  G V  +GS V
Sbjct: 42  EVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDW-PVKPNP-PFIPGHEGVGFVSAVGSGV 99
Query: 86  KNFKVGDKV------------VAVLSG----------------GGLAEFAVAKESLTVAR 117
           K+ K GD+V               L G                GG AE+ VA  +     
Sbjct: 100 KHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYSVNGGFAEYVVADPNFVGHL 159
Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG 177
           P+ +   E A + CAG+T ++ L  +         +  + ++ +  G +G  AVQ A+  
Sbjct: 160 PKNIDFNEIAPVLCAGVTVYKGLKVT-------DTKPGDWVVISGIGGLGHMAVQYARAM 212
Query: 178 NTHVTAT-CGARNIELVKSLGADEVLDYKT 206
             +V A     R ++L + LGA   ++ KT
Sbjct: 213 GLNVAAVDIDDRKLDLARRLGATVTVNAKT 242

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 131/332 (39%), Gaps = 55/332 (16%)
Query: 36  EALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVV 95
           + ++++  A +   D  L +GM    L  K P+    +  G +  +   V+  + GD V+
Sbjct: 43  DVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVI 102
Query: 96  ---AVLSG------------------------GGLAEFAVAKESLTVARPQEVSA---AE 125
              AV  G                        GG AEF        +  P+++S     E
Sbjct: 103 LHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVE 162
Query: 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTA 183
            A +  AG+TA++A+ ++      G+      +     G +G  AVQL K+    T +  
Sbjct: 163 MAPLADAGITAYRAVKKAARTLYPGA-----YVAIVGVGGLGHIAVQLLKVMTPATVIAL 217
Query: 184 TCGARNIELVKSLGADEVLD-YKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPN-LGT 241
                 ++L + LGAD V+D  + P    ++   GR  +  ++ V       + P  LG 
Sbjct: 218 DVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGR 277
Query: 242 TGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGE------NLDFLVKLVKEGKLK 295
            G         R+++     +L F   +++   VS +G        L  LV L  +GK++
Sbjct: 278 MG---------RLIIVGYGGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGKVR 328
Query: 296 TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
             +D  H L +  D   +   G   G+ ++ P
Sbjct: 329 VEVDI-HKLDEINDVLERLEKGEVLGRAVLIP 359

>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From Mycobacterium Abscessus Solved By Iodide Ion Sad Length = 342

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 147/338 (43%), Gaps = 26/338 (7%)
Query: 3   GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFL 62
           G   M A+Q  S  G   GL + +V  P    +  ++ V+AA +   D+ + KG  +  L
Sbjct: 18  GPGSMKAIQAQSLSG-PEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQ--L 74
Query: 63  PRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVS 122
             + PF+P  + AG V+    E    K GD+V+A    GG AE      S  +  P ++ 
Sbjct: 75  KMEPPFVPGIETAG-VVRSAPEGSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLD 133
Query: 123 AAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHV 181
            AE   +     T + A  +   ++       + +L+  A+G +G  A+Q+AK +G   +
Sbjct: 134 DAEAVALIANYHTMYFAYARRGQLR-----AGETVLVLGAAGGIGTAAIQIAKGMGAKVI 188
Query: 182 TATCGARNIELVKSLGADEVLDYKTPDGAALKSPS-GRKYDAVINCVTGIPWSTFEPNLG 240
                    E VKS+GAD VL  +     A++  + G   D V++ + G  +      L 
Sbjct: 189 AVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLA 248
Query: 241 TTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENL----DFLV-------KLV 289
           + G+++    +   + T    +L      L+  +    GE L    D+L        KLV
Sbjct: 249 SEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVA---WGEFLRTHADYLYETQAGLEKLV 305
Query: 290 KEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
            EG ++  + ++  LS+   A      G+  GK+++ P
Sbjct: 306 AEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP 342

>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFP-FIPASDVAGEVIG 80
           L+ V++P P   + E +L+VEA  +N  D  ++ G    +L R  P FIP  +V G V  
Sbjct: 13  LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGA---YLTRLHPPFIPGMEVVGVV-- 67
Query: 81  LGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQAL 140
                     G +  A++  GGLAE     +   +  P+ +S  E A  P + LTA+ AL
Sbjct: 68  ---------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLAL 118
Query: 141 TQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHVTATCGARNIELVKSLGAD 199
            ++       +   + +L+ AA+GA+G  AVQ+A+ +G   + A      + L  +LGA+
Sbjct: 119 KRA------QARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAE 172
Query: 200 EVLDY-KTPDGA 210
           E   Y + P+ A
Sbjct: 173 EAATYAEVPERA 184

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187
           G+P  GLTA+  L +  GVK       + +L++AA+GAVG    Q+AKL    V    G+
Sbjct: 127 GMP--GLTAYFGLLEVCGVK-----GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGS 179
Query: 188 -RNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK 244
              I  +K +G D   +YKT +    ALK  S   YD   + V G   +T    +   GK
Sbjct: 180 DEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGK 239
Query: 245 VID------FN--------PSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVK 290
           +        +N        PSP  ++   +K+L      +  +    + + L  L+K V 
Sbjct: 240 IAICGAISVYNRMDQLPPGPSPESII---YKQLRIEGFIVYRWQGDVREKALRDLMKWVL 296
Query: 291 EGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
           EGK++              A+ + ++G   GK +V
Sbjct: 297 EGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331

>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFP-FIPASDVAGEVIG 80
           L+ V++P P   + E +L+VEA  +N  D  ++ G    +L R  P FIP  +V G V  
Sbjct: 13  LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGA---YLTRLHPPFIPGMEVVGVV-- 67
Query: 81  LGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQAL 140
                     G +  A++  GGLAE     +   +  P+ +S  E A  P + LTA+ AL
Sbjct: 68  ---------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLAL 118
Query: 141 TQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHVTATCGARNIELVKSLGAD 199
            ++       +   + +L+ AA+GA+G  AVQ+A+ +G   + A      + L  +LGA+
Sbjct: 119 KRA------QARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAE 172
Query: 200 EVLDY-KTPDGA 210
           E   Y + P+ A
Sbjct: 173 EAATYAEVPERA 184

>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From Salmonella Enterica In Complex With Nadp Length = 324

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 66/149 (44%), Gaps = 17/149 (11%)
Query: 64  RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG------GGLAEFAVAKESLTVAR 117
           R FP IP  D AG V    SE   F  G +V+    G      GGLAE A  K    VA 
Sbjct: 55  RHFPXIPGIDFAGTV--HASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVAL 112
Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSG---QQKNILITAASGAVGLYAVQLA 174
           P  +S+     I  AG TA   +       L+ +G   Q   +++T ASG VG  AV L 
Sbjct: 113 PAGLSSRNAXIIGTAGFTAXLCVX-----ALEDAGIRPQDGEVVVTGASGGVGSTAVALL 167
Query: 175 KLGNTHVTATCGARNIE-LVKSLGADEVL 202
                 V A  G  +    +KSLGA+ +L
Sbjct: 168 HKLGYQVAAVSGRESTHGYLKSLGANRIL 196

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 138/336 (41%), Gaps = 45/336 (13%)
Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85
           +V +P P  +E L+++  A +   D ++ KG+       + P I   + AG ++ +G E+
Sbjct: 20  DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGV-EAKQGFRLPIILGHENAGTIVEVG-EL 77
Query: 86  KNFKVGDKVVAV---------------------------LSGGGLAEFAVAKESLTVARP 118
              K GD VV                              + GG +E+ + K S  + + 
Sbjct: 78  AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL 137
Query: 119 QEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN 178
             +S  E A +  AG T+  A+ Q+L      S   + ++I    G + +Y +Q+ K   
Sbjct: 138 NSLSPVEAAPLADAGTTSMGAIRQALPFI---SKFAEPVVIVNGIGGLAVYTIQILKALM 194
Query: 179 THVTATCGAR---NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTF 235
            ++T    +R   + +    LGAD V + K  +    K   G      I+ V G   +T+
Sbjct: 195 KNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLV-GTEETTY 253
Query: 236 EPNLG----TTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE 291
             NLG      G +I      + +   A+    ++KK L   S      +L+ +V+L + 
Sbjct: 254 --NLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLL--GSNYGSLNDLEDVVRLSES 309
Query: 292 GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           GK+K  I  K  L     A+     GR  G+ ++ P
Sbjct: 310 GKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP 344

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 85/212 (40%), Gaps = 38/212 (17%)
Query: 21  GLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG 80
           G + VEV VP P   E L+KV A SI   D  + +         K P I   +VAGEV+ 
Sbjct: 15  GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVE 74
Query: 81  LGSEVKNFKVGD---------------------------KVVAVLSGGGLAEFAVAKESL 113
           +G  V+  +VGD                           K+  V + G  AE+AV     
Sbjct: 75  IGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQN 134
Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
               P+         IP    T  + L  ++   L G    K++LIT A G +GL  + +
Sbjct: 135 IWKNPKS--------IPPEYATLQEPLGNAVDTVLAGPISGKSVLITGA-GPLGLLGIAV 185
Query: 174 AKLGNTHVTATCGARNI--ELVKSLGADEVLD 203
           AK    +        +   EL K +GAD V++
Sbjct: 186 AKASGAYPVIVSEPSDFRRELAKKVGADYVIN 217

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 85/212 (40%), Gaps = 38/212 (17%)
Query: 21  GLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG 80
           G + VEV VP P   E L+KV A SI   D  + +         K P I   +VAGEV+ 
Sbjct: 16  GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVE 75
Query: 81  LGSEVKNFKVGD---------------------------KVVAVLSGGGLAEFAVAKESL 113
           +G  V+  +VGD                           K+  V + G  AE+AV     
Sbjct: 76  IGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQN 135
Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
               P+         IP    T  + L  ++   L G    K++LIT A G +GL  + +
Sbjct: 136 IWKNPKS--------IPPEYATLQEPLGNAVDTVLAGPISGKSVLITGA-GPLGLLGIAV 186
Query: 174 AKLGNTHVTATCGARNI--ELVKSLGADEVLD 203
           AK    +        +   EL K +GAD V++
Sbjct: 187 AKASGAYPVIVSEPSDFRRELAKKVGADYVIN 218

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187
           G+P  G+TA+    +    K     + + + ++AASGAVG    QLAK+   +V  + G+
Sbjct: 137 GMP--GMTAYAGFYEVCSPK-----EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS 189
Query: 188 RN-IELVKS-LGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243
           +  ++L+K+  G D+  +YK      AALK       D     V G        N+   G
Sbjct: 190 KEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHG 249
Query: 244 KVIDFNPSPRVLL-----TFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKL 294
           ++       +  L           + + + ++  F VS       + L+F++  ++EGK+
Sbjct: 250 RIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKI 309
Query: 295 KTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
             V D    L KA +A      G+  GK +V
Sbjct: 310 TYVEDVADGLEKAPEALVGLFHGKNVGKQVV 340

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 34/218 (15%)
Query: 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187
           G+P  G+TA+    +    K     + + + ++AASGAVG    Q AK+   +V  + G+
Sbjct: 135 GMP--GMTAYAGFHEVCSPK-----KGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGS 187
Query: 188 RN-IELVKS-LGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243
           +  ++L+KS  G DE  +YK      AALK       D     V G        N+   G
Sbjct: 188 KEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYG 247
Query: 244 KV----------IDFNPSPRVLLTFAWKK------LTFSKKQLVPFSVSPKGENLDFLVK 287
           ++          ++       L     K+      L F    L P       + L+ ++ 
Sbjct: 248 RIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYP-------KYLEMVIP 300
Query: 288 LVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
            +K GK+  V D  H L  A  A     SGR  GK +V
Sbjct: 301 QIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVV 338

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 140/344 (40%), Gaps = 55/344 (15%)
Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF-----LPRKFPFIPASDVAGEVIG 80
           E+ VP P   + L+KVEAA +   D   ++G          L  K P     ++AG++  
Sbjct: 17  EIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEE 76
Query: 81  LGSEVKNFKVGDKV---------------------------VAVLSGGGLAEFAVAKESL 113
           +G EV  +  GD V                           + +   G  AE+ +     
Sbjct: 77  VGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYK 136
Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
              + + ++A E A + C+G+T ++A+ ++    LD +   K +L+  A G +G  AVQ+
Sbjct: 137 YXYKLRRLNAVEAAPLTCSGITTYRAVRKA---SLDPT---KTLLVVGAGGGLGTXAVQI 190
Query: 174 AKL--GNTHVTATCGARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTG 229
           AK   G T +        +E  K  GAD V++    D  A   +    +  DAVI+    
Sbjct: 191 AKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNS 250
Query: 230 -IPWSTFEPNLGTTGKVID---FNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFL 285
               S +   L   GK +    F       L +    +T S+ Q V   V   G   DFL
Sbjct: 251 EKTLSVYPKALAKQGKYVXVGLFGAD----LHYHAPLITLSEIQFVGSLV---GNQSDFL 303
Query: 286 --VKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
              +L + GK+K  I     L +A +A     + +A G+ ++ P
Sbjct: 304 GIXRLAEAGKVKPXITKTXKLEEANEAIDNLENFKAIGRQVLIP 347

>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp Length = 330

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 131/308 (42%), Gaps = 24/308 (7%)
Query: 34  KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDK 93
           KD  L+KV  + IN  D     G     + R++P I   D AG V+   S    F  GD+
Sbjct: 31  KDGVLIKVAYSGINYKDG--LAGKAGGNIVREYPLILGIDAAGTVVS--SNDPRFAEGDE 86
Query: 94  VVA------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVK 147
           V+A      V   GGL+E+A       V  PQ +S  E      AG TA  ++      +
Sbjct: 87  VIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAXVYGTAGFTAALSVH-----R 141
Query: 148 LDGSG---QQKNILITAASGAVGLYAVQ-LAKLGNTHVTATCGARNIELVKSLGADEVLD 203
           L+ +G   ++ ++L+T A+G VG  AV  L K G   V +T      + +K LGA EV+ 
Sbjct: 142 LEQNGLSPEKGSVLVTGATGGVGGIAVSXLNKRGYDVVASTGNREAADYLKQLGASEVIS 201
Query: 204 YKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKV-----IDFNPSPRVLLTF 258
            +      LK+ S +++   ++ V G   ++    +   G V           P  +  F
Sbjct: 202 REDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPF 261
Query: 259 AWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGR 318
             + ++      V      +    +     +K  +L T++D + SL +   A    +  R
Sbjct: 262 ILRGVSLLGIDSVYCPXDVRAAVWERXSSDLKPDQLLTIVDREVSLEETPGALKDILQNR 321
Query: 319 ATGKIIVE 326
             G++IV+
Sbjct: 322 IQGRVIVK 329

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 84/202 (41%), Gaps = 46/202 (22%)
Query: 66  FPFIPASDVAGEVIGLGSEVKNFKVGDKV-VAVLSG------------------------ 100
           +P +P  ++ GEV  +GS+VK   VGDKV V  L G                        
Sbjct: 70  YPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYA 129
Query: 101 ----------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDG 150
                     GG +   VA E   +  P  +    GA + CAG+T +  L       LD 
Sbjct: 130 SIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKY---FGLDE 186
Query: 151 SGQQKNILITAASGAVGLYAVQLAKLGNTHVT--ATCGARNIELVKSLGADEVLDYKTPD 208
            G+   I+     G V   AV+ AK   + VT  +T  ++  E +K+ GAD  L   + D
Sbjct: 187 PGKHIGIVGLGGLGHV---AVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL--VSRD 241
Query: 209 GAALKSPSGRKYDAVINCVTGI 230
              +++ +G   D +I+ V+ +
Sbjct: 242 QEQMQAAAG-TLDGIIDTVSAV 262

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 41/212 (19%)
Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWK-LQKGMLRPFLPRKFPFIPASDVAGEVIG 80
           L+  + P+P P +DE LL++    I   D    + G +  F+  K P +   + +G V+ 
Sbjct: 16  LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIV-KDPMVIGHEASGTVVK 74
Query: 81  LGSEVKNFKVGDKVVAVLSG-----------------------------GGLAEFAVAKE 111
           +G  VK+ K GD+ VAV  G                             G LA + V   
Sbjct: 75  VGKNVKHLKKGDR-VAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAA 133
Query: 112 SLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAV 171
                 P  VS  EGA +    +  H    +  GV+L  +      ++   +G +GL +V
Sbjct: 134 DFCHKLPDNVSLEEGALLEPLSVGVHAC--RRAGVQLGTT------VLVIGAGPIGLVSV 185
Query: 172 QLAKLGNTHVTATCGA-RNIELVKSLGADEVL 202
             AK     V  T  + R +E+ K+ GAD  L
Sbjct: 186 LAAKAYGAFVVCTARSPRRLEVAKNCGADVTL 217

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187
           G+P  GLTA+  L +  GVK       + +++ AA+GAVG    Q+AKL    V    G+
Sbjct: 122 GMP--GLTAYFGLLEICGVK-----GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGS 174
Query: 188 -RNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTG 229
              +  ++ LG D V +YKT +     LK  S   YD   + V G
Sbjct: 175 DEKVAYLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGG 219

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA 187
           G+P  GLTA+  L +  GVK       + +++ AA+GAVG    Q+AKL    V    G+
Sbjct: 143 GMP--GLTAYFGLLEICGVK-----GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGS 195
Query: 188 -RNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTG 229
              +  ++ LG D V +YKT +     LK  S   YD   + V G
Sbjct: 196 DEKVAYLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGG 240

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 101/252 (40%), Gaps = 47/252 (18%)
Query: 18  GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKL-QKGMLRPFLPRKFPFIPASDVAG 76
           G   L+    P+P P  +E LLK+ +  I   D    Q G +  F+ +K P +   + +G
Sbjct: 14  GPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKK-PMVLGHEASG 72
Query: 77  EVIGLGSEVKNFKVGDKVVAVLSG-----------------------------GGLAEFA 107
            V+ +GS V++ + GD+ VA+  G                             G L  F 
Sbjct: 73  TVVKVGSLVRHLQPGDR-VAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRFY 131
Query: 108 VAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVG 167
               +     P  V+  EGA I    +  H    +  GV L       N ++   +G +G
Sbjct: 132 KHNANFCYKLPDNVTFEEGALIEPLSVGIHAC--RRAGVTLG------NKVLVCGAGPIG 183
Query: 168 LYAVQLAK-LGNTHVTAT-CGARNIELVKSLGADEVLDY--KTPDGAALKSPS--GRKYD 221
           L  +  AK +G   V  T   A  +   K +GAD +L+   ++P+  A K     G K +
Sbjct: 184 LVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGLLGSKPE 243
Query: 222 AVINCVTGIPWS 233
             I C TG+  S
Sbjct: 244 VTIEC-TGVETS 254

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 137/344 (39%), Gaps = 53/344 (15%)
Query: 18  GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGE 77
           G A L   E+    PN  EALL +E   +   D  +  G        K   +   +  G 
Sbjct: 12  GYADLVEKELRAIKPN--EALLDMEYCGVCHTDLHVAAGDY----GNKAGTVLGHEGIGI 65
Query: 78  VIGLGSEVKNFKVGDKVVA------------VLSG----------------GGLAEFAVA 109
           V  +G++V + +VGD+V               +SG                GG+AE A+ 
Sbjct: 66  VKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIV 125
Query: 110 KESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLY 169
                V  P  +   E + I CAG+T ++A+  S GVK    G  + I     +G +G  
Sbjct: 126 VADYAVKVPDGLDPIEASSITCAGVTTYKAIKVS-GVK---PGDWQVIF---GAGGLGNL 178
Query: 170 AVQLAK--LGNTHVTATCGARNIELVKSLGADEVLDYK--TPDGAALKSPSGRKYDAVIN 225
           A+Q AK   G   +        + L K +GAD +++     P     K   G    + I 
Sbjct: 179 AIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIINSGDVNPVDEIKKITGGLGVQSAIV 238
Query: 226 C-VTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF 284
           C V  I +     +L   GK++     P   +T +   + F     V  + S  G  LD 
Sbjct: 239 CAVARIAFEQAVASLKPMGKMVAV-ALPNTEMTLSVPTVVFDG---VEVAGSLVGTRLDL 294
Query: 285 --LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
               +   EGK+K ++ ++  L +  D   +  +G+  G+++++
Sbjct: 295 AEAFQFGAEGKVKPIVATR-KLEEINDIIDEMKAGKIEGRMVID 337

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 136/344 (39%), Gaps = 53/344 (15%)
Query: 18  GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGE 77
           G A L   E+    PN  EALL +E   +   D  +  G        K   +   +  G 
Sbjct: 12  GYADLVEKELRAIKPN--EALLDMEYCGVCHTDLHVAAGDF----GNKAGTVLGHEGIGI 65
Query: 78  VIGLGSEVKNFKVGDKVVA------------VLSG----------------GGLAEFAVA 109
           V  +G++V + +VGD+V               +SG                GG+AE A+ 
Sbjct: 66  VKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIV 125
Query: 110 KESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLY 169
                V  P  +   E + I CAG+T ++A+  S GVK    G  + I     +G +G  
Sbjct: 126 VADYAVKVPDGLDPIEASSITCAGVTTYKAIKVS-GVK---PGDWQVIF---GAGGLGNL 178
Query: 170 AVQLAK--LGNTHVTATCGARNIELVKSLGADEVLDYK--TPDGAALKSPSGRKYDAVIN 225
           A+Q AK   G   +        + L K +GAD  ++     P     K   G    + I 
Sbjct: 179 AIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIV 238
Query: 226 C-VTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF 284
           C V  I +     +L   GK++     P   +T +   + F     V  + S  G  LD 
Sbjct: 239 CAVARIAFEQAVASLKPMGKMVAV-AVPNTEMTLSVPTVVFDG---VEVAGSLVGTRLDL 294
Query: 285 --LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
               +   EGK+K ++ ++  L +  D   +  +G+  G+++++
Sbjct: 295 AEAFQFGAEGKVKPIVATR-KLEEINDIIDEMKAGKIEGRMVID 337

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 49/189 (25%)
Query: 21  GLKHVEVPVPTPNKDEALLKVEAASINPID---WKLQ---KGMLRPFLPRKFPFIPASDV 74
           GL  V+ PVP P   E L++VEAASI   D   WK     +G +RP      P +   + 
Sbjct: 12  GLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRP------PLVTGHEF 65
Query: 75  AGEVIGLGSEVKNFKVGD---------------------------KVVAVLSGGGLAEFA 107
           +G V  +G  V+  +VGD                           +++ V   GG AE+ 
Sbjct: 66  SGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYV 125
Query: 108 VAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSG-QQKNILITAASGAV 166
           V         P+++     A +   G   H            GSG   K++LIT A G +
Sbjct: 126 VVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYA--------GSGVSGKSVLITGA-GPI 176
Query: 167 GLYAVQLAK 175
           GL A  + +
Sbjct: 177 GLMAAMVVR 185

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 22/204 (10%)
Query: 21  GLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG 80
           G + VEV VP P   E L+KV A SI   D  + +         K P I   +VAGEV+ 
Sbjct: 16  GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVE 75
Query: 81  LGSEVKNFKVGDKV---VAVLSGGGLA----EFAVAKESLTVARPQEVSAAEGAGIPCAG 133
           +G  V++ +VGD +     ++ G   A     + V + +       +   A  A +P   
Sbjct: 76  VGPGVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGVDMDGVFAHYAIVPAKN 135
Query: 134 L--------TAHQALTQSLGVKLD----GSGQQKNILITAASGAVGLYAVQLAKLGNTH- 180
                      + AL + LG  +D    G    ++ LIT A G +GL  + +AK    + 
Sbjct: 136 AWKNPKDMPPEYAALQEPLGNAVDTVLAGPIAGRSTLITGA-GPLGLLGIAVAKASGAYP 194
Query: 181 -VTATCGARNIELVKSLGADEVLD 203
            + +       +L K +GAD V++
Sbjct: 195 VIVSEPSEFRRKLAKKVGADYVVN 218

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	327
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	2e-98
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	4e-93
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	8e-80
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	6e-77
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	3e-76
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	5e-76
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-68
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	4e-65
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	2e-63
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-61
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-60
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	8e-60
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	6e-59
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-58
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-58
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	8e-58
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-56
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-54
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-54
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-53
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	2e-51
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	2e-51
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	7e-50
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-49
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-46
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-45
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	6e-45
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	8e-41
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	4e-37
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	2e-33
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	6e-31
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	6e-27
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	9e-27
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	4e-26
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	3e-25
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-24
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	4e-23
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-22
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	2e-21
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	3e-21
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	3e-21
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	1e-20
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	2e-20
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	2e-20
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	3e-20
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	9e-20
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	2e-18
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	6e-18
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	5e-17
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-16
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	6e-16
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	1e-13
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	4e-13
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	3e-12
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	9e-12
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	1e-11
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	1e-11
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	2e-11
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	6e-11
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-08
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-06
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-06
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-05
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	3e-04
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	5e-04

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  294 bits (754), Expect = 2e-98
 Identities = 98/356 (27%), Positives = 156/356 (43%), Gaps = 36/356 (10%)

Query: 5   AVMHAVQYDSYGGGVAGLKHVEVPVPTPNK-DEALLKVEAASINPIDWKLQKGMLRPFLP 63
               A   D YG          + +P  +  +E ++KV AAS+NPID  ++ G     L 
Sbjct: 20  FQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALN 79

Query: 64  ------------RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAV 108
                        +FP     DV+G V+  G +VK FK GD+V A +     G L+EF V
Sbjct: 80  MKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVV 139

Query: 109 AKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGL 168
              +    +P+ ++  + A +P   LTA  A+ +  G+       ++ +LI  ASG VG 
Sbjct: 140 VSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKR-VLILGASGGVGT 198

Query: 169 YAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT 228
           +A+Q+ K  + HVTA C     ELV+ LGAD+V+DYK+      +  S + +D +++ V 
Sbjct: 199 FAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGS-VEEQLKSLKPFDFILDNVG 257

Query: 229 GIPW----------------STFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKK--QL 270
           G                   +   P L    ++   +   +  +T   K L    K    
Sbjct: 258 GSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHY 317

Query: 271 VPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
                   G  LD + +LV  GK++ VI+     SK  +A+ K   G A GK ++ 
Sbjct: 318 RWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVIN 373

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  278 bits (714), Expect = 4e-93
 Identities = 105/326 (32%), Positives = 152/326 (46%), Gaps = 19/326 (5%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKG--MLRPFLPR 64
           M A+Q+D +G     LK V+ P P   K++ L+KV AAS+NPID+K + G   +   L  
Sbjct: 7   MKAIQFDQFGP-PKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKN 65

Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL----SGGGLAEFAVAKESLTVARPQE 120
             P     D +GEVI LGS+V N  +GDKV+ +          AE+  A     + + ++
Sbjct: 66  NLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEK 125

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH 180
           +S  + A +P AGLTA QAL Q   VK    G    +LI A +G VG  A+QLAK   T 
Sbjct: 126 LSFLQAASLPTAGLTALQALNQ-AEVK---QGD--VVLIHAGAGGVGHLAIQLAKQKGTT 179

Query: 181 VTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLG 240
           V  T   RN   +K+LGA++ ++Y   D            DAVI+ V G         L 
Sbjct: 180 VITTASKRNHAFLKALGAEQCINYHEEDFLLA---ISTPVDAVIDLVGGDVGIQSIDCLK 236

Query: 241 TTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDS 300
            TG ++         +    +      ++          E L +L KLV E KL+  I  
Sbjct: 237 ETGCIVSVPTITAGRV---IEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEISR 293

Query: 301 KHSLSKAEDAWAKSISGRATGKIIVE 326
              LS+A  A     +G   GK++ +
Sbjct: 294 IFQLSEAVTAHELLETGHVRGKLVFK 319

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  244 bits (626), Expect = 8e-80
 Identities = 63/330 (19%), Positives = 119/330 (36%), Gaps = 29/330 (8%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M   Q  +Y      +    V +P    D+ L++ +A  INP+DWK  K      +    
Sbjct: 2   MEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKAN---PINWSN 58

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKV---VAVLSGGGLAEFAVAKESLTVARPQEVSA 123
             +P  D AG ++ +G++V +  +G +V    ++   G  AEF V      +  P  +S 
Sbjct: 59  GHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSF 118

Query: 124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA 183
              A +PC  LTA QA  + + +      +   +LI    GAV     Q+       V  
Sbjct: 119 ERAAALPCPLLTAWQAF-EKIPLT---KQR--EVLIVGF-GAVNNLLTQMLNNAGYVVDL 171

Query: 184 TCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG 243
              + +  L    G   +    +           +KY A+ + V     +   P+L   G
Sbjct: 172 VSASLSQALAAKRGVRHLYREPSQV--------TQKYFAIFDAVNSQNAAALVPSLKANG 223

Query: 244 KVI--------DFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK 295
            +I          +P+    +++    L                +  + L+ L+ +GK++
Sbjct: 224 HIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKME 283

Query: 296 TVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
                     +  +A   S   +    + +
Sbjct: 284 IAAPDIFRFEQMIEALDHSEQTKLKTVLTL 313

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  238 bits (610), Expect = 6e-77
 Identities = 94/339 (27%), Positives = 154/339 (45%), Gaps = 23/339 (6%)

Query: 7   MHAVQYDSYGG--GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPR 64
           M AV Y+        A L  +E+P P P   + L++V+A S+NP+D+K+++         
Sbjct: 23  MKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTD- 81

Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKV---VAVLSGGGLAEFAVAKESLTVARPQEV 121
               +   D AG V  +G +V  F+ GD+V    +++  G  AEF +  E +   +P+ +
Sbjct: 82  --WKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTL 139

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTH 180
             AE A +P   +TA +A    L V     G    ILI   +G VG  AVQ+A+   +  
Sbjct: 140 DWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLT 199

Query: 181 VTATC-GARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCV-TGIPWSTFEPN 238
           V AT       E VKSLGA  V+D+  P  A + +        V +   T    +     
Sbjct: 200 VIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADL 259

Query: 239 LGTTGKVI--------DFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVK 290
           +   G+          D     R  ++    +L F++       +S +G  L+ + +LV 
Sbjct: 260 IAPQGRFCLIDDPSAFDIMLFKRKAVSIHH-ELMFTRPMFGTPDMSEQGRLLNDVSRLVD 318

Query: 291 EGKLKTVIDSKHSLSKAED---AWAKSISGRATGKIIVE 326
           EG+L+T + ++ S   A +   A A   SG A GK+++E
Sbjct: 319 EGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIE 357

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  236 bits (605), Expect = 3e-76
 Identities = 76/339 (22%), Positives = 132/339 (38%), Gaps = 24/339 (7%)

Query: 7   MHAVQYDSYG--GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPR 64
           + A+ ++           K   + +P P   E L+K+++ S+NP+D K +          
Sbjct: 3   LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD-----VS 57

Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKV---VAVLSGGGLAEFAVAKESLTVARPQEV 121
           K P +   D  G V  +G+EV  F  GD V    +    G  AE+ +  E L    P+ +
Sbjct: 58  KAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNI 117

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQ-KNILITAASGAVGLYAVQLAKLGNTH 180
           SA +   +P  G+TA++ L    G+  + +  + K +LI   +G VG  A Q+AK     
Sbjct: 118 SAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLR 177

Query: 181 VTATC-GARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCV-TGIPWSTFEPN 238
           V  T      IE  K +GAD VL++K       K+      D V     T + +      
Sbjct: 178 VITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQL 237

Query: 239 LGTTGKV--IDFNPSPRVLLTFAWKKLT------FSKKQLVPFSVSPKGENLDFLVKLVK 290
           +   G +  I    + + L     K L+      F++       +    E L+ +   V+
Sbjct: 238 VKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVE 297

Query: 291 EGKLKTVID---SKHSLSKAEDAWAKSISGRATGKIIVE 326
           +   +          +      A     S    GK+++ 
Sbjct: 298 QNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVIN 336

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  235 bits (603), Expect = 5e-76
 Identities = 87/339 (25%), Positives = 151/339 (44%), Gaps = 31/339 (9%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A   +   G    L+  ++  P P   + L+++EA+  NP+D K++ G   P   +  
Sbjct: 8   MIAAVVEEANG-PFVLR--KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEA-PHAQQPL 63

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG-----GGLAEFAVAKESLTVARPQEV 121
           P I   D+AG V+ +G EV +F+VGD V  +  G     G  A+FA     L  ++P  +
Sbjct: 64  PAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAAL 123

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV 181
           +  + + +P   +TA + L     V+    GQ   +LI    G VG  A+Q+A      V
Sbjct: 124 TMRQASVLPLVFITAWEGLVDRAQVQ---DGQ--TVLIQGGGGGVGHVAIQIALARGARV 178

Query: 182 TATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT 241
            AT    ++E V+ LGA  +   + P+  A +  +G+ +D V + + G      + +   
Sbjct: 179 FATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGG---PVLDASFSA 235

Query: 242 T---GKVID-FNPSPRVLLTFAWKKLTFS-----KKQLVPFSVSPKGENLDFLVKLVKEG 292
               G V+         L   ++K+ T+S        L    ++  GE L     LV+ G
Sbjct: 236 VKRFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTG 295

Query: 293 KLKTVIDSKH-SLSKAEDAWA----KSISGRATGKIIVE 326
           KL   +D +  S+++   A+     ++   R  GKI + 
Sbjct: 296 KLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAIT 334

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  217 bits (555), Expect = 1e-68
 Identities = 71/358 (19%), Positives = 130/358 (36%), Gaps = 51/358 (14%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
             A+  + +            P P   +D+  ++VEA +INP D  ++     P      
Sbjct: 12  QTALTVNDHDEV---TVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFATP------ 62

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG--------GGLAEFAVAKESLTVARP 118
                +D AG V+ +GS+V + +VGD+V    +         G  +++ V +  +    P
Sbjct: 63  WAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIP 122

Query: 119 QEVSAAEGAGIPCAGLTAHQALTQSLGVKL--------DGSGQQKNILITAASGAVGLYA 170
           + +S  + A +P    TA  A+ + LG+ L            +   +L+   S A     
Sbjct: 123 KGLSFEQAAALPAGISTAGLAM-KLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVT 181

Query: 171 VQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTG 229
           +Q+ +L      ATC   N +L KS GA+EV DY+ P+    +++ +       ++C+T 
Sbjct: 182 MQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITN 241

Query: 230 IPWSTFEPNLGTT----GKVIDFNPSP---------RVLLTFAWKKLTFSKKQLVPFSVS 276
               +            G  +  NP P             T              P+   
Sbjct: 242 --VESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRP 299

Query: 277 PKGENLDF-------LVKLVKEGKLKTVIDS--KHSLSKAEDAWAKSISGRATGKIIV 325
              E   F         +LV++G+L        +      +        G  +G+ +V
Sbjct: 300 GSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLV 357

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  207 bits (530), Expect = 4e-65
 Identities = 91/363 (25%), Positives = 149/363 (41%), Gaps = 65/363 (17%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV   + GG    L+  ++PVP P   E  ++++AA++N +D  ++KG+  P      
Sbjct: 1   MRAVVMRARGG-PEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASP--KLPL 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS--------------------------- 99
           P +  +D +G V  +G  V+ F  GD+VV                               
Sbjct: 58  PHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHR 117

Query: 100 GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI 159
            G  AE+ V  E+    +P+ +S  E A IP   LTA Q +   LGV+    G   ++L+
Sbjct: 118 HGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVR---PGD--DVLV 172

Query: 160 TAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPS 216
            AA   V + A+Q+AKL    V AT G    +   K+LGADE ++Y  PD      +   
Sbjct: 173 MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTG 232

Query: 217 GRKYDAVINCVTGIPWSTFEPNL-------------GTTGKVIDFNPSPRVLLTFAWKKL 263
           G+  D V++         FE  +              ++G       +            
Sbjct: 233 GKGADKVVDHTGA---LYFEGVIKATANGGRIAIAGASSGYEGTLPFAH----------- 278

Query: 264 TFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKI 323
            F ++  +  S       L  +++ V+EGKLK V+     L  A +        R  GK+
Sbjct: 279 VFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKV 338

Query: 324 IVE 326
           +++
Sbjct: 339 VLQ 341

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  204 bits (520), Expect = 2e-63
 Identities = 67/344 (19%), Positives = 127/344 (36%), Gaps = 40/344 (11%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           + A+ Y  +G     ++   + +      +  +K+ AA INP D  + +G     LP + 
Sbjct: 27  VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNY-GLLP-EL 84

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG-GGLAEFAVAKESLTVARPQEVSAAE 125
           P +  ++   +V+ +GS V   K GD V+   +G G     AV  E   +  P ++    
Sbjct: 85  PAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQS 144

Query: 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC 185
            A +     TA++ L     ++    G   +++  A++  VG   +Q+A           
Sbjct: 145 AATLGVNPCTAYRMLMDFEQLQ---PGD--SVIQNASNSGVGQAVIQIAAALGLRTINVV 199

Query: 186 GARN-----IELVKSLGADEVLDYKTPDGAALKS--PSGRKYDAVINCVTGIPWSTFEPN 238
             R       + +KSLGA+ V+  +      +K+      +    +NCV G    +    
Sbjct: 200 RDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGG---KSSTEL 256

Query: 239 L-------------GTTGKVIDFNPSPRVLLTFAWKKLTFS----KKQLVPFSVSPKGEN 281
           L             G   + +  + S  +      K L        +     S     E 
Sbjct: 257 LRQLARGGTMVTYGGMAKQPVVASVSLLIF-----KDLKLRGFWLSQWKKDHSPDQFKEL 311

Query: 282 LDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
           +  L  L++ G+L     S+  L   + A   S+    + K I+
Sbjct: 312 ILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQIL 355

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  198 bits (507), Expect = 1e-61
 Identities = 66/341 (19%), Positives = 124/341 (36%), Gaps = 34/341 (9%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
              +Q+  +G     L+     +     +E  +++    INP D     G          
Sbjct: 5   GKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITG-AYAHRI-PL 62

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEG 126
           P IP  +  G V  +G+ V    +G +V+ +   G   E+        V  P  +     
Sbjct: 63  PNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTA 122

Query: 127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186
           A +    LTA    T++L ++         +L+ A   A+G    QL+++ N  + A   
Sbjct: 123 AQMYINPLTAWVTCTETLNLQ---RND--VLLVNACGSAIGHLFAQLSQILNFRLIAVTR 177

Query: 187 -ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNL---- 239
             ++ E +  LGA  V+D  T       ++  +G   DA I+ + G              
Sbjct: 178 NNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG---PDGNELAFSLR 234

Query: 240 ---------GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPK--GENLDFLVKL 288
                      +G  +++      ++T A         +     VSP    E    L++L
Sbjct: 235 PNGHFLTIGLLSGIQVNWAE----IVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRL 290

Query: 289 VKEGKLKTV-IDSKHSLSKAEDAWAKSISGRAT-GKIIVEP 327
           V+  +L+ + + S + L+  + A     S   T GK+ +  
Sbjct: 291 VENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTS 331

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  196 bits (500), Expect = 2e-60
 Identities = 91/336 (27%), Positives = 148/336 (44%), Gaps = 23/336 (6%)

Query: 2   AGKAVMHAVQYDSYGGGVAGLK-HVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
            G+ +M AV+   +GG    LK   ++ VP P   + L+KV A  +NP++  ++ G    
Sbjct: 25  TGQKLMRAVRVFEFGG-PEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR 83

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVV-AVLSGGGLAEFAVAKESLTVARPQ 119
                 P+ P SDVAG +  +G     FK GD+V  +    GG AE+A+A +      P+
Sbjct: 84  --KPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPE 141

Query: 120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT 179
           ++   +GA I     TA++AL  S  VK   +G+  ++L+  ASG VGL A Q+A+    
Sbjct: 142 KLDFKQGAAIGIPYFTAYRALIHSACVK---AGE--SVLVHGASGGVGLAACQIARAYGL 196

Query: 180 HVTATCG-ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFE 236
            +  T G     ++V   GA EV +++  +      K    +  D +I  +         
Sbjct: 197 KILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLAN---VNLS 253

Query: 237 PN---LGTTGKVIDF---NPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVK 290
            +   L   G+VI                 K+ +     L   +     +    L   ++
Sbjct: 254 KDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGME 313

Query: 291 EGKLKTVIDSKHSLSKAEDAWAKSI-SGRATGKIIV 325
            G LK VI S++ L K  +A    I    ATGK+I+
Sbjct: 314 IGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMIL 349

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  194 bits (495), Expect = 8e-60
 Identities = 83/348 (23%), Positives = 151/348 (43%), Gaps = 40/348 (11%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           M+    M  V   S+GG    +   + P+P   + E L++ EA  +N  D   ++G   P
Sbjct: 23  MSLPQEMRFVDLKSFGG-PDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP 81

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQE 120
             P+    I   +++GE++G+G  V  + VGDKV  + +GG  AE+ +      +  P+ 
Sbjct: 82  --PKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKG 139

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH 180
             A + A +P    T    L Q  G+     G+  ++LI   +  +G  A+QLA+     
Sbjct: 140 YDAVKAAALPETFFTVWANLFQMAGLT---EGE--SVLIHGGTSGIGTTAIQLARAFGAE 194

Query: 181 VTATCG-ARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWSTFEPN 238
           V AT G     E  + LGA   ++Y++ D  A +K+ +G+  D +++ +     + FE N
Sbjct: 195 VYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA---AYFERN 251

Query: 239 L----------------GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENL 282
           +                G   + ++ +P    ++    K+LT +   + P +   K    
Sbjct: 252 IASLAKDGCLSIIAFLGGAVAEKVNLSP----IMV---KRLTVTGSTMRPRTAEEKRAIR 304

Query: 283 DFLVK----LVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
           D L+     L++ G +  VI    +     DA      G   GK+++ 
Sbjct: 305 DDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLT 352

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  192 bits (489), Expect = 6e-59
 Identities = 77/351 (21%), Positives = 138/351 (39%), Gaps = 42/351 (11%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV    +GG +  L+     +P P   E  ++V+A  +N ID  +++G +    P K 
Sbjct: 4   MRAVVLAGFGG-LNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDN--PPKT 60

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEG 126
           P +P  + +G V  LG  VK +++GD+V+A ++    AE            P ++S +E 
Sbjct: 61  PLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEA 120

Query: 127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHVTATC 185
           A  P   +TA+  L +   ++    G   ++L+ +A G VG    QL   + N  V  T 
Sbjct: 121 AAFPMNFVTAYVMLFEVANLR---EGM--SVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA 175

Query: 186 GARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNL------ 239
                E +K      + D        +K  S    D V++C+ G         L      
Sbjct: 176 STFKHEAIKD-SVTHLFDRNADYVQEVKRISAEGVDIVLDCLCG---DNTGKGLSLLKPL 231

Query: 240 ------GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLV-------------PFSVSPKG- 279
                 G++  V     S        W+    +  +L                    +  
Sbjct: 232 GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAG 291

Query: 280 ---ENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
                ++ L+ L  + K+K V+DS  +L + ++A  +       GK+I++ 
Sbjct: 292 LIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDV 342

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  194 bits (494), Expect = 2e-58
 Identities = 77/394 (19%), Positives = 130/394 (32%), Gaps = 92/394 (23%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP------ 60
           M A            +   +VPVP     EAL+ V A+S+N                   
Sbjct: 43  MFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLE 102

Query: 61  --------FLPRKFPF-IPASDVAGEVIGLGSEVKNFKVGDKVVA--------------- 96
                         P+ +  SD+AG V+  G  V  ++ GD+VVA               
Sbjct: 103 RYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHND 162

Query: 97  ------------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSL 144
                         + GGLAE A+ K +  + +P  +S  E A       TA++ L    
Sbjct: 163 TMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRN 222

Query: 145 GVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLD 203
           G  +   G   N+LI  ASG +G YA Q A  G  +        +  E+ +++GA+ ++D
Sbjct: 223 GAGM-KQGD--NVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIID 279

Query: 204 YKTPDGAALKSPS-------------------GRKYDAVINCVTGIPWSTFEPNL----- 239
                    K  +                   G   D V          TF  ++     
Sbjct: 280 RNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR---ETFGASVFVTRK 336

Query: 240 --------GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE 291
                    T+G + +++        + W  L    K+++    +          +L+ +
Sbjct: 337 GGTITTCASTSGYMHEYD------NRYLWMSL----KRIIGSHFANY-REAWEANRLIAK 385

Query: 292 GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
           G++   +   +SL     A          GK+ V
Sbjct: 386 GRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGV 419

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  190 bits (486), Expect = 3e-58
 Identities = 82/362 (22%), Positives = 140/362 (38%), Gaps = 65/362 (17%)

Query: 5   AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPR 64
             M     +        LK  E PVP   + + +++  A S+N  D  + +  +      
Sbjct: 26  KWMQEWSTE--TVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL--DL 81

Query: 65  KFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG------------------------ 100
            FPF+PASD++G V  +G  V  F+ GD+V++  +                         
Sbjct: 82  AFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHP 141

Query: 101 GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT 160
           G L+E+ V  E   VA P+ + AAE + +PCAGLTA  AL +   ++   +G    +++ 
Sbjct: 142 GVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLR---AGD--RVVVQ 196

Query: 161 AASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSG 217
              G V L+ +Q+AK     V  T      ++   +LGAD  ++    D           
Sbjct: 197 GTGG-VALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGD 255

Query: 218 RKYDAVINCVTGIPWSTFEPNL-------------GTTGKVIDFNPSPRVLLTFAWKKLT 264
           R  D ++    G   +    +L                G  +        +     K   
Sbjct: 256 RGADHILEIAGG---AGLGQSLKAVAPDGRISVIGVLEGFEVSGP-----VGPLLLKSPV 307

Query: 265 FSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKII 324
                +   SV  +   L+ LV  V    LK VID ++  ++  +A A  +     GK++
Sbjct: 308 -----VQGISVGHR-RALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAH-LDRGPFGKVV 360

Query: 325 VE 326
           +E
Sbjct: 361 IE 362

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  191 bits (488), Expect = 8e-58
 Identities = 81/401 (20%), Positives = 136/401 (33%), Gaps = 97/401 (24%)

Query: 5   AVMHAVQYDSYGG-----GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLR 59
             + A   D + G         L+  EVP+P    DE L+ V A+SIN            
Sbjct: 28  LHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPI 87

Query: 60  P---------------FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVA-------- 96
           P                   +   +  SD +G V+  G  V+ +K GD V+         
Sbjct: 88  PTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQ 147

Query: 97  -------------------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAH 137
                                + GGLAE+ V + S  + +P  ++  E A  P    TA+
Sbjct: 148 EPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAY 207

Query: 138 QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSL 196
           + L    G ++   G    +LI  ASG +G YA+Q  K G     A    A+    V++L
Sbjct: 208 RMLVSDRGAQM-KQGD--IVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRAL 264

Query: 197 GADEVLDYKTPD-------------------GAALKSPSGRKYDAVINCVTGIPWSTFEP 237
           G D V++                           +   +GR+ D V          TF  
Sbjct: 265 GCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR---VTFGL 321

Query: 238 NL-------------GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF 284
           ++              ++G +  F+               + K + +  S     E    
Sbjct: 322 SVIVARRGGTVVTCGSSSGYLHTFDNRY-----------LWMKLKKIVGSHGANHEEQQA 370

Query: 285 LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
             +L + G +   + + + L++A +A     + R  GK+ V
Sbjct: 371 TNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAV 411

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  185 bits (473), Expect = 2e-56
 Identities = 71/361 (19%), Positives = 120/361 (33%), Gaps = 50/361 (13%)

Query: 1   MAGKAVMHAVQYDSYGG-----------GVAGLKHVEVPVPTPNKDEALLKVEAASINPI 49
           M   + M A+     G                L+   + VP P   + L+KV  ASINP 
Sbjct: 5   MTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPS 64

Query: 50  DWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK-NFKVGDKVV---AVLSGGGLAE 105
           D    KG      PR        +  G ++  G E      VG +V     + + G  AE
Sbjct: 65  DVAFIKGQYGQ--PRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAE 122

Query: 106 FAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA 165
           +AVA+ +  +     V   +GA +    LTA  A+   +  +     +    ++TA +  
Sbjct: 123 YAVAEAAACIPLLDTVRDEDGAAMIVNPLTAI-AMFDIVKQE---GEK--AFVMTAGASQ 176

Query: 166 VGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD-GAALKSPS-GRKYDA 222
           +    + LAK        T      I L+K +GA  VL+ K PD  A L+      +   
Sbjct: 177 LCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRI 236

Query: 223 VINCVTGIPWSTFEPNL-------------GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQ 269
            ++ VTG                                    +++     +        
Sbjct: 237 FLDAVTG---PLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIF----QHKHIEGFW 289

Query: 270 LVPFSVSPKGE---NLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
           L  +    K      +    K   +G+  T + +   L++A          +  GK+ + 
Sbjct: 290 LSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPAE-LTKPNGKVFIR 348

Query: 327 P 327
           P
Sbjct: 349 P 349

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  180 bits (459), Expect = 1e-54
 Identities = 85/347 (24%), Positives = 141/347 (40%), Gaps = 40/347 (11%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
             G   M A+Q  S  G   GL + +V  P    +  ++ V+AA +   D+ + KG  + 
Sbjct: 16  TQGPGSMKAIQAQSLSG-PEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQL 74

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQE 120
               + PF+P  + AG V     E    K GD+V+A    GG AE      S  +  P +
Sbjct: 75  --KMEPPFVPGIETAGVVRSAP-EGSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQ 131

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH 180
           +  AE   +     T + A  +   ++   +G+   +L+  A+G +G  A+Q+AK     
Sbjct: 132 LDDAEAVALIANYHTMYFAYARRGQLR---AGE--TVLVLGAAGGIGTAAIQIAKGMGAK 186

Query: 181 VTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRK-YDAVINCVTGIPWSTFEPN 238
           V A        E VKS+GAD VL  +     A++  +G    D V++ + G     F+  
Sbjct: 187 VIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG---PAFDDA 243

Query: 239 L------------GTTGKVIDFNPSPRVLLT------FAWKKLTFSKKQLVPFSVSPKGE 280
           +            G     I      R+LL        AW +   +    +        E
Sbjct: 244 VRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLY-------E 296

Query: 281 NLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
               L KLV EG ++  + ++  LS+   A      G+  GK+++ P
Sbjct: 297 TQAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP 342

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  180 bits (460), Expect = 2e-54
 Identities = 88/344 (25%), Positives = 152/344 (44%), Gaps = 39/344 (11%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV +D  GG    L   EV  P+P + E LLKV A+++N  D   ++G   P  P   
Sbjct: 23  MLAVHFDKPGG-PENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGA 79

Query: 67  PFIPASDVAGEVIGLGSEVK-NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAE 125
             I   + +G V  LG   + ++K+GD  +A+L GGG A++    E L +  P+ ++  +
Sbjct: 80  SNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQ 139

Query: 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC 185
            A IP A LTA Q L     V+   +G    +LI A    VG  A+QL ++       T 
Sbjct: 140 AAAIPEAWLTAFQLLHLVGNVQ---AGD--YVLIHAGLSGVGTAAIQLTRMAGAIPLVTA 194

Query: 186 G-ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNLG-- 240
           G  + +++ + LGA    +YK  D +   LK   G   + +++C+ G   S +E N+   
Sbjct: 195 GSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGG---SYWEKNVNCL 251

Query: 241 -----------TTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLV 289
                        G  I+     ++L     K+ +     L       K   ++   + +
Sbjct: 252 ALDGRWVLYGLMGGGDINGPLFSKLLF----KRGSLITSLLRSRDNKYKQMLVNAFTEQI 307

Query: 290 -------KEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
                     +L  V+D  + +++ ++A     + +  GKI++E
Sbjct: 308 LPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLE 351

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  178 bits (453), Expect = 2e-53
 Identities = 70/373 (18%), Positives = 129/373 (34%), Gaps = 68/373 (18%)

Query: 7   MHAVQYDSYGG--GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGM--LRPFL 62
             AV Y  +G    V   +  E+       +E ++K   + +NP D    +G+   +P  
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 63  P-----RKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG-GGLAEFAVAKES---- 112
                  +      ++   EVI +GS V + + GD V+      G     A+  +     
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123

Query: 113 -------LTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA 165
                      +P  ++  +GA I    LTA+  LT  + +     G+    +    + A
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLT---PGKDW-FIQNGGTSA 179

Query: 166 VGLYAVQLAKLGNTHVTATCGARN-----IELVKSLGADEVLDYKTPDGAALKS------ 214
           VG YA Q+ KL N +  +    R      +  +K LGA +V+     +            
Sbjct: 180 VGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWI 239

Query: 215 -PSGRKYDAVINCVTGIPWSTFEPNL-------------GTTGKVIDFNPSPRVL--LT- 257
             SG +    +NCV G    +                  G + + +    S  +    T 
Sbjct: 240 KQSGGEAKLALNCVGG---KSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTS 296

Query: 258 --FAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLS---KAEDAWA 312
             F   +L  + K+L       K   L+ ++   +EGKL      +          + + 
Sbjct: 297 AGFWVTELLKNNKEL-------KTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQ 349

Query: 313 KSISGRATGKIIV 325
             ++    GK ++
Sbjct: 350 DGVANSKDGKQLI 362

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  173 bits (440), Expect = 2e-51
 Identities = 83/355 (23%), Positives = 129/355 (36%), Gaps = 42/355 (11%)

Query: 1   MAGKAVMHAVQYDSYGGGV--AGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGML 58
           +  +++M  +           A     + PVP P   + L++     +N  D     G  
Sbjct: 18  LYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRY 77

Query: 59  RPFLPRKFPFIPASDVAGEVIGLGSEVK-NFKVGDKVVAVLSGGGLAEFAVAKESLTVAR 117
            P    K PF    +  GEV+ LG      + VG   VA ++ G  AE+ V   S+    
Sbjct: 78  DP--SVKPPFDIGFEGIGEVVALGLSASARYTVGQ-AVAYMAPGSFAEYTVVPASIATPV 134

Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG 177
           P          +  +G TA+ +L +  G+     G+   +L+TAA+G  G +A+QL+K  
Sbjct: 135 PSVKPEY--LTLLVSGTTAYISLKELGGLS---EGK--KVLVTAAAGGTGQFAMQLSKKA 187

Query: 178 NTHVTATCG-ARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWSTF 235
             HV  TC        +KSLG D  ++YKT   G  LK       D V   V G   + F
Sbjct: 188 KCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG---AMF 244

Query: 236 EPNL------------GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP----KG 279
           +  +            G             V       KL      +  F ++       
Sbjct: 245 DLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQ 304

Query: 280 ENLDFLVKLVKEGKLKTVIDSKHS--------LSKAEDAWAKSISGRATGKIIVE 326
             +  L+++   G L   +D            L     A      G+ TGKI+VE
Sbjct: 305 AAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVE 359

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  172 bits (438), Expect = 2e-51
 Identities = 73/342 (21%), Positives = 124/342 (36%), Gaps = 33/342 (9%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           + A      GG        EV V +P   +  L+  A  +N +D   + G+  P +  + 
Sbjct: 2   VMAAVIHKKGG-PDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEP 60

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG-GGLAEFAVAKESLTVARPQEVSA-- 123
           P +   + A  V  +G  V +F VG++V   L   G  ++  +      +  P+++    
Sbjct: 61  PIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDD 120

Query: 124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA 183
              AG+   G+TA   L Q+  VK    G    +LI AA+G +G   V  A+     V  
Sbjct: 121 VHLAGLMLKGMTAQYLLHQTHKVK---PGD--YVLIHAAAGGMGHIMVPWARHLGATVIG 175

Query: 184 TCG-ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNL- 239
           T       E  + LG    ++Y T D A    +   G+  D V + +      T + +L 
Sbjct: 176 TVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK---DTLQKSLD 232

Query: 240 -----GT-------TGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPK--GENLDFL 285
                G        +G          +        L  ++  L  +  +     E    L
Sbjct: 233 CLRPRGMCAAYGHASGVADPIRVVEDLG---VRGSLFITRPALWHYMSNRSEIDEGSKCL 289

Query: 286 VKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
              VK G L + +     L +A  A       +  G I++ P
Sbjct: 290 FDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLP 331

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  168 bits (427), Expect = 7e-50
 Identities = 82/336 (24%), Positives = 140/336 (41%), Gaps = 29/336 (8%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
              +  D  GG    +K+ + PVP+ +++E L+K +   +N I+   +KG+     P + 
Sbjct: 9   QKVILIDEIGG-YDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIY----PCEK 63

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVS---A 123
           P++   + +G V+  G  V NF+VGD+V  + +        ++ +   +  P+  S    
Sbjct: 64  PYVLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEEL 123

Query: 124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA 183
              A      LTA     ++  VK    G    +L+ AA+G VGL   QL K+   H  A
Sbjct: 124 KLYAAGLLQVLTALSFTNEAYHVK---KGD--YVLLFAAAGGVGLILNQLLKMKGAHTIA 178

Query: 184 TCG-ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNLG 240
                  +++ K  GA+ +++    D     LK  +G+  DA  + V      TFE +L 
Sbjct: 179 VASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK---DTFEISLA 235

Query: 241 TT---GKVIDF-----NPSPRVLLTFAWKKLTFSKKQLVPFSVSPK--GENLDFLVKLVK 290
                G  + F        P  +   + K +T  + QL  +   P+      D    LV 
Sbjct: 236 ALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVN 295

Query: 291 EGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
             KL   I   + L     A A   S +  GK+++E
Sbjct: 296 SKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLE 331

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  166 bits (424), Expect = 1e-49
 Identities = 89/340 (26%), Positives = 137/340 (40%), Gaps = 35/340 (10%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
              +Q+ + GG    L++V+     P     +++ +A  +N ID   + G L P      
Sbjct: 2   AKRIQFSTVGG-PEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSG-LYP--APFL 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVV-AVLSGGGLAEFAVAKESLTVARPQEVSAAE 125
           P    ++ AG V  +G EV  FKVGD+V       G  +E  V  E+  V     VS  +
Sbjct: 58  PSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQ 117

Query: 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC 185
            A +   GLT    L Q+  VK    G+   IL  AA+G VG  A Q AK     +  T 
Sbjct: 118 AAALMLKGLTVQYLLRQTYQVK---PGE--IILFHAAAGGVGSLACQWAKALGAKLIGTV 172

Query: 186 G-ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNL--- 239
                    K+LGA E +DY   D A   L+   G+K   V + V      T+  +L   
Sbjct: 173 SSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ---DTWLTSLDSV 229

Query: 240 ---GT-------TGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPK--GENLDFLVK 287
              G        +G V   N      +      +  ++  L  ++ + +      D L  
Sbjct: 230 APRGLVVSFGNASGPVSGVNLG----ILAQKDSVYVTRPTLGSYANNAQNLQTMADELFD 285

Query: 288 LVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           ++  GKLK     +++L  A  A  +  + R TG  I+ P
Sbjct: 286 MLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP 325

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  159 bits (405), Expect = 1e-46
 Identities = 82/338 (24%), Positives = 137/338 (40%), Gaps = 29/338 (8%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
              +++  +GG    L+ VE     P ++E  ++ +A  IN ID  ++ G L P  P   
Sbjct: 2   ATRIEFHKHGG-PEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSG-LYP--PPSL 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVV-AVLSGGGLAEFAVAKESLTVARPQEVSAAE 125
           P    ++ AG V  +GS VK+ K GD+VV A  + G  +             P  +S  +
Sbjct: 58  PSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQ 117

Query: 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC 185
            A     GLT +  L ++  +K     +    L  AA+G VGL A Q AK     +  T 
Sbjct: 118 AAASFLKGLTVYYLLRKTYEIK---PDE--QFLFHAAAGGVGLIACQWAKALGAKLIGTV 172

Query: 186 G-ARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNLGTT 242
           G A+  +     GA +V++Y+  D      +   G+K   V + V      T+E +L   
Sbjct: 173 GTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGR---DTWERSLDCL 229

Query: 243 ---GKVIDF-----NPSPRVLLTFAWKK-LTFSKKQLVPFSVSPK--GENLDFLVKLVKE 291
              G ++ F       +   L     K  L  ++  L  +  + +   E  + L  L+  
Sbjct: 230 QRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIAS 289

Query: 292 GKLKTVIDSKH--SLSKAEDAWAKSISGRATGKIIVEP 327
           G +K  +  +    L  A+ A     S    G  ++ P
Sbjct: 290 GVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP 327

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  157 bits (398), Expect = 2e-45
 Identities = 78/366 (21%), Positives = 141/366 (38%), Gaps = 64/366 (17%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKG-----MLRPF 61
           M AV+    G     L   E+ VP P   + L+KVEAA +   D  +++G      +   
Sbjct: 1   MRAVRLVEIGKP---LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVED 57

Query: 62  LPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVV-----------------------AVL 98
           L  K P     ++AG++  +G EV  +  GD V                           
Sbjct: 58  LGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW 117

Query: 99  SG----GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQ 154
            G    G  AE+ +      + + + ++A E A + C+G+T ++A+ ++  +      + 
Sbjct: 118 LGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKA-SLD---PTK- 172

Query: 155 KNILITAASGAVGLYAVQLAK-LGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGAA- 211
             +L+  A G +G  AVQ+AK +    +         +E  K  GAD V++    D  A 
Sbjct: 173 -TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAE 231

Query: 212 -LKSPSGRKYDAVINCVTGIPWSTFEP---NLGTTGKVIDFNPSPRVLLTFAWKKLTFSK 267
             +    +  DAVI+        T       L   GK         V++      L +  
Sbjct: 232 IRRITESKGVDAVIDLN-NSE-KTLSVYPKALAKQGKY--------VMVGLFGADLHYHA 281

Query: 268 KQLVPFSVSPKG------ENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATG 321
             +    +   G       +   +++L + GK+K +I     L +A +A     + +A G
Sbjct: 282 PLITLSEIQFVGSLVGNQSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIG 341

Query: 322 KIIVEP 327
           + ++ P
Sbjct: 342 RQVLIP 347

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  154 bits (391), Expect = 6e-45
 Identities = 85/335 (25%), Positives = 135/335 (40%), Gaps = 49/335 (14%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A      GG    L+ V++P P   + E +L+VEA  +N  D  ++ G          
Sbjct: 1   MKAWVLKRLGGP---LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHP 55

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEG 126
           PFIP  +V G V            G +  A++  GGLAE     +   +  P+ +S  E 
Sbjct: 56  PFIPGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEA 104

Query: 127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG 186
           A  P + LTA+ AL ++   +    G+   +L+ AA+GA+G  AVQ+A+     V A   
Sbjct: 105 AAFPVSFLTAYLALKRA-QAR---PGE--KVLVQAAAGALGTAAVQVARAMGLRVLAAAS 158

Query: 187 -ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNL------ 239
               + L  +LGA+E   Y      A    +    D V+  V G      E +L      
Sbjct: 159 RPEKLALPLALGAEEAATYAEVPERAK---AWGGLDLVLE-VRG---KEVEESLGLLAHG 211

Query: 240 ------GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPK--GENLDFLVKLVKE 291
                 G     +   P  R++     + L      L P         E L FL+  +  
Sbjct: 212 GRLVYIGAAEGEVAPIPPLRLMR----RNLAVLGFWLTPLLREGALVEEALGFLLPRL-G 266

Query: 292 GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
            +L+ V+      ++AE A+   +    TGK++V 
Sbjct: 267 RELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVR 301

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  145 bits (367), Expect = 8e-41
 Identities = 67/381 (17%), Positives = 124/381 (32%), Gaps = 66/381 (17%)

Query: 5   AVMHAVQYDSYG--GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGM----- 57
            +  A+Q  S     G   L    +  P P  DE L+++EA+ +NP D  L  G      
Sbjct: 1   GMHSALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMST 60

Query: 58  -------LRPFLPRKFP--------------FIPASDVAGEVIGLGSEVKNFKVGDKVVA 96
                   RP +  + P                  ++ AG V+  GS      +  K VA
Sbjct: 61  AKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVA 120

Query: 97  VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKN 156
            + G   +++        +  P+  + A+GA      LTA   + +++ ++         
Sbjct: 121 AIGGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTAL-GMVETMRLE-----GHSA 174

Query: 157 ILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALK 213
           ++ TAA+  +G    Q+       +          +L+K+ GA  V +  +P       +
Sbjct: 175 LVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTE 234

Query: 214 SPSGRKYDAVINCVTG----------------IPWSTFEPNLGTTGKVI------DFNPS 251
           +          +   G                     +     TT K +      D +P+
Sbjct: 235 ALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPT 294

Query: 252 PRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVK---EGKLKTVIDSKHSLSKAE 308
                      +      L PF      E  + L + V    +    +    + SL++  
Sbjct: 295 EFNRNFGMAWGMGGW--LLFPFLQKIGRERANALKQRVVAELKTTFASHYSKEISLAEVL 352

Query: 309 DAWA-KSISGRAT-GKIIVEP 327
           D       + RAT  K ++ P
Sbjct: 353 DLDMIAVYNKRATGEKYLINP 373

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  135 bits (341), Expect = 4e-37
 Identities = 74/360 (20%), Positives = 136/360 (37%), Gaps = 58/360 (16%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
             A     +      L   +V +P P  +E L+++  A +   D ++ KG+       + 
Sbjct: 4   SKAALLKKFSEP---LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRL 59

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVV-----------------------AVLSG--- 100
           P I   + AG ++ +G E+   K GD VV                        ++ G   
Sbjct: 60  PIILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTT 118

Query: 101 -GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI 159
            GG +E+ + K S  + +   +S  E A +  AG T+  A+ Q+L      +     ++I
Sbjct: 119 NGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEP---VVI 175

Query: 160 TAASGAVGLYAVQLAK--LGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGAALKSPS 216
               G + +Y +Q+ K  + N  +       ++ +    LGAD V + K  +    K   
Sbjct: 176 VNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTD 235

Query: 217 GRKYDAVINCVTGIPWSTFEP---NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPF 273
           G      I+ V G    T       L   G +        +L+    K+++        +
Sbjct: 236 GLGASIAIDLV-GTE-ETTYNLGKLLAQEGAI--------ILVGMEGKRVSLEAFDTAVW 285

Query: 274 SVSPKG------ENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
           +    G       +L+ +V+L + GK+K  I  K  L     A+     GR  G+ ++ P
Sbjct: 286 NKKLLGSNYGSLNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP 344

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  125 bits (315), Expect = 2e-33
 Identities = 73/364 (20%), Positives = 140/364 (38%), Gaps = 63/364 (17%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPT-PNKDEALLKVEAASINPIDWKLQKGMLRPFLPRK 65
           + A +   Y      L+  +V  P    + + ++++  A +   D  L +GM    L  K
Sbjct: 16  LKAARLHEYNKP---LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPK 72

Query: 66  FPFIPASDVAGEVIGLGSEVKNFKVGDKVV-----------------------AVLSG-- 100
            P+    +  G +  +   V+  + GD V+                           G  
Sbjct: 73  LPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLN 132

Query: 101 --GGLAEFAVAKESLTVARPQEVS---AAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQK 155
             GG AEF        +  P+++S     E A +  AG+TA++A+ ++      G+    
Sbjct: 133 IDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGA---- 188

Query: 156 NILITAASGAVGLYAVQLAK-LGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGAALK 213
            + I    G +G  AVQL K +    V A       ++L + LGAD V+D +      + 
Sbjct: 189 YVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVM 247

Query: 214 SPS-GRKYDAVINCVTGIPWSTFEPNLGTT---GKVIDFNPSPRVLLTFAWKKLTFSKKQ 269
             + GR  +  ++ V G   +T +         G++        +++ +   +L F   +
Sbjct: 248 ELTRGRGVNVAMDFV-GSQ-ATVDYTPYLLGRMGRL--------IIVGYG-GELRFPTIR 296

Query: 270 LVPFSV----SPKGENLDF--LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKI 323
           ++   V    S  G  ++   LV L  +GK++  +   H L +  D   +   G   G+ 
Sbjct: 297 VISSEVSFEGSLVGNYVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRA 355

Query: 324 IVEP 327
           ++ P
Sbjct: 356 VLIP 359

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  118 bits (298), Expect = 6e-31
 Identities = 75/365 (20%), Positives = 126/365 (34%), Gaps = 64/365 (17%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AVQY   G        V++P PTP   E LLKV AA +   D  +             
Sbjct: 1   MKAVQYTEIGSE---PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQ-YAYGL 56

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVV------------------------------- 95
           P     +  G V  LG  V  F VGD V                                
Sbjct: 57  PLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP 116

Query: 96  -AVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQ 154
             + S G +AE+ +   +  +    ++     A +  AGLT + A+++ L +   GS   
Sbjct: 117 PGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGS--- 173

Query: 155 KNILITAASGAVGLYAVQLAK-LGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGAAL 212
              ++    G +G   +Q+ + +    V A       + L + +GAD  +        A+
Sbjct: 174 -TAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAI 231

Query: 213 KSPS-GRKYDAVINCVTGIPWSTFEPNLGTT---GKVIDFNPSPRVLLTFAWKKLTFSKK 268
           +  + G+   AV + V G   ST +         G +         ++            
Sbjct: 232 RELTGGQGATAVFDFV-GAQ-STIDTAQQVVAVDGHI--------SVVGIHAGAHAKVGF 281

Query: 269 QLVPFSVSPK----GENLDF--LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGK 322
            ++PF  S      G   +   +V L + G+L        +L +   A+ +   G   G+
Sbjct: 282 FMIPFGASVVTPYWGTRSELMEVVALARAGRLDIHT-ETFTLDEGPAAYRRLREGSIRGR 340

Query: 323 IIVEP 327
            +V P
Sbjct: 341 GVVVP 345

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  107 bits (269), Expect = 6e-27
 Identities = 78/371 (21%), Positives = 130/371 (35%), Gaps = 83/371 (22%)

Query: 5   AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASI---------NPIDWKLQK 55
           A+M A    ++G     L   EVPVP P   +  +K+EA+ +            DW +  
Sbjct: 1   AMMKAAVVRAFGAP---LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADG--DWPV-- 53

Query: 56  GMLRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKV--------------------- 94
                      PFIP  +  G V  +GS V   K GD+V                     
Sbjct: 54  -------KPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWET 106

Query: 95  ---VAVLSG----GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVK 147
                  +G    GG  E+ VA  +     P +V   E A I CAG+T ++ L  +    
Sbjct: 107 LCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVT---- 162

Query: 148 LDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA-TCGARNIELVKSLGADEVLDYKT 206
              +   + ++I+   G +G  AVQ A+     V A       + L + LGA+  ++ + 
Sbjct: 163 --DTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARD 219

Query: 207 PDGAALKSPSGRKYDAVINCVT-GIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTF 265
            D AA           V+        +S     +   G +         L          
Sbjct: 220 TDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMVRRGGTI--------ALNGLPPGDFGT 271

Query: 266 SKKQLVPFSVSPKG----------ENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSI 315
               +V   ++ +G          E+LDF       G +K  + S   L    D + +  
Sbjct: 272 PIFDVVLKGITIRGSIVGTRSDLQESLDF----AAHGDVKATV-STAKLDDVNDVFGRLR 326

Query: 316 SGRATGKIIVE 326
            G+  G+++++
Sbjct: 327 EGKVEGRVVLD 337

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  107 bits (269), Expect = 9e-27
 Identities = 76/369 (20%), Positives = 120/369 (32%), Gaps = 66/369 (17%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           +  +++M AV+ +S G     +    V +P P  D+ L+KVEA  I   D  L  G    
Sbjct: 18  LYFQSMMKAVRLESVGN----ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF-- 71

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVV------------------------- 95
             P   P     +  G V+  GS V++   G ++                          
Sbjct: 72  --PSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLR 129

Query: 96  --AVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQ 153
              +   GG AE+ +         P  +    GA         H       GV L G   
Sbjct: 130 AIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLH-------GVDLSGIKA 182

Query: 154 QKNILITAASGAVGLYAVQLAKL-GNTHVTAT--CGARNIELVKSLGADEVLDYKTPDGA 210
              + I    G +GL  VQLA+L G T V  +     +   L + +GA   +D    D  
Sbjct: 183 GSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATK-RRLAEEVGATATVDPSAGDVV 240

Query: 211 A----LKSPSGRKYDAVINCVTGIPWSTFEPNLGTT---GKVIDF-NPSPRVLLTFAWKK 262
                         D VI C  G+   T + +       G V+          +      
Sbjct: 241 EAIAGPVGLVPGGVDVVIEC-AGVA-ETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFD 298

Query: 263 LTFSKKQLVPFSVSPKGENLDF--LVKLVKEGKL--KTVIDSKHSLSKAEDAWAKSISGR 318
           + F  ++L                   LV  G +    +I  + SL +A D  +   +  
Sbjct: 299 ILF--RELRVLGSF--INPFVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAG 354

Query: 319 ATGKIIVEP 327
              K++V P
Sbjct: 355 E-VKVLVIP 362

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  105 bits (264), Expect = 4e-26
 Identities = 86/360 (23%), Positives = 137/360 (38%), Gaps = 67/360 (18%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A   + +      LK  EV  PT +  E L++++A  +   D     G     +  K 
Sbjct: 1   MKAAVVEQFKEP---LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP--VKPKL 55

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKV------------------------VAVLSG-- 100
           P IP  +  G V  +G  V + KVGD+V                            +G  
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115

Query: 101 --GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNIL 158
             GG AE+  A     V  P  +S  E A I CAG+T ++AL  +      G+   + + 
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVT------GAKPGEWVA 169

Query: 159 ITAASGAVGLYAVQLAKLGNTHVTA-TCGARNIELVKSLGADEVLDYKTPD-GAALKSPS 216
           I    G +G  AVQ AK    +V A   G   +EL K LGAD V++    D    +K   
Sbjct: 170 IYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKV 228

Query: 217 GRKYDAVINCV-TGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV 275
           G    A +    +   + +   ++   G          VL+    +++       V   +
Sbjct: 229 GG-VHAAVVTAVSKPAFQSAYNSIRRGGAC--------VLVGLPPEEMPIPIFDTVLNGI 279

Query: 276 SPKG----------ENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
              G          E L F      EGK+KT+I     L K  + + + + G+  G++++
Sbjct: 280 KIIGSIVGTRKDLQEALQF----AAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVVL 334

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  105 bits (264), Expect = 3e-25
 Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 17/217 (7%)

Query: 17  GGVAGLKHVEVPV--PTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDV 74
           G + GL  V+ P         E  + + AA +N  D  +  GM              S+ 
Sbjct: 219 GSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPG------VASLGSEG 272

Query: 75  AGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGL 134
           AG V+  G  V     GD+V+  +        AVA   +    P   S A  A +P   L
Sbjct: 273 AGVVVETGPGVTGLAPGDRVMG-MIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFL 331

Query: 135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVK 194
           TA+ AL    G++    G+  ++L+ +A+G VG+ A+QLA+     V AT      + V 
Sbjct: 332 TAYYALVDLAGLR---PGE--SLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAV- 385

Query: 195 SLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTG 229
            L  + +   +T D     L +  GR  D V+N + G
Sbjct: 386 ELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAG 422

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  101 bits (253), Expect = 1e-24
 Identities = 63/261 (24%), Positives = 101/261 (38%), Gaps = 60/261 (22%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASI---------NPIDWKLQKGM 57
              V +    G    L++ ++PVP P  +E L+ V+ + +            DW L    
Sbjct: 6   QKGVIFYESHGK---LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHG--DWPL---- 56

Query: 58  LRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKV-VAVLSG---------------- 100
                P K P +   + AG V+G+G  VK +K+GD   +  L+G                
Sbjct: 57  -----PVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNC 111

Query: 101 -----------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLD 149
                      G   ++A A        PQ    A+ A I CAG+T ++AL  +  +   
Sbjct: 112 PHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSA-NLM-- 168

Query: 150 GSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA-TCGARNIELVKSLGADEVLDYKTPD 208
            +G    + I+ A+G +G  AVQ AK     V     G    EL +S+G +  +D+    
Sbjct: 169 -AGHW--VAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEK 225

Query: 209 --GAALKSPSGRKYDAVINCV 227
               A+   +      VIN  
Sbjct: 226 DIVGAVLKATDGGAHGVINVS 246

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 96.9 bits (242), Expect = 4e-23
 Identities = 70/352 (19%), Positives = 119/352 (33%), Gaps = 71/352 (20%)

Query: 26  EVPVPT-PNKDEALLKVEAASI----NPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG 80
           E  +P   ++DE  +K+ ++ +     P  +K             +P     + +G +  
Sbjct: 16  ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAH--------YYPITLGHEFSGYIDA 67

Query: 81  LGSEVKNFKVGDKVV---------------------------AVLSGGGLAEFAVAKESL 113
           +GS V +   GD V                                 GG AE+ V K   
Sbjct: 68  VGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKN 127

Query: 114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
             A P ++   +GA I    +  H          L    + KN++I  A G +GL A+Q 
Sbjct: 128 VFALPTDMPIEDGAFIEPITVGLH-------AFHLAQGCENKNVIIIGA-GTIGLLAIQC 179

Query: 174 AKL-GNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGAAL--KSPSGRKYDAVINCVTG 229
           A   G   VTA    +  + L KS GA +  +        +       R    ++    G
Sbjct: 180 AVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILET-AG 238

Query: 230 IPWSTFEP------------NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP 277
           +P  T E              +GT  + +    +    +    K+LT     +   S  P
Sbjct: 239 VP-QTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILR--KELTVIGSWMNYSSPWP 295

Query: 278 KGENLDFLVKLVKEGKL--KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
             E  +   +L+ E KL  + +I  + S      A          GK+++ P
Sbjct: 296 GQE-WETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP 346

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 96.3 bits (240), Expect = 1e-22
 Identities = 61/393 (15%), Positives = 117/393 (29%), Gaps = 87/393 (22%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPT-PNKDEALLKVEAASINPIDWKLQKG--M 57
           + GK      +   +      ++  EVP P      E ++KV+A  I   D  + +    
Sbjct: 25  IEGKLTWLGSKV--WRYP--EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEE 80

Query: 58  LRPFLPR--KFPFIPASDVAGEVIGLGSEV------KNFKVGDKVV-------------- 95
                P    FP     + +G V+  G E       K F++G+ V               
Sbjct: 81  GYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCA 140

Query: 96  -------------AVLSGGGLAEFAVAKESLTVARP-------QEVSAAEGAGIPCAGLT 135
                             G  AE+         +          +     G+ +    + 
Sbjct: 141 EGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVA 200

Query: 136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNI----- 190
            +  + +  G++        N++I    G +GL AV + K          GA  +     
Sbjct: 201 YNAVIVRGGGIRPG-----DNVVILGG-GPIGLAAVAILKH--------AGASKVILSEP 246

Query: 191 -----ELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNL---- 239
                 L K LGAD V+D    +     L   +G      +   TG+P     P +    
Sbjct: 247 SEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEA-TGVP-QLVWPQIEEVI 304

Query: 240 ----GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG-KL 294
               G    V          +    +     + Q+V             ++ L+  G  +
Sbjct: 305 WRARGINATVAIV-ARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASGMDM 363

Query: 295 KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
             +I    S+ +  +   +  + ++  K+ +  
Sbjct: 364 TKIISKTVSMEEIPEYIKRLQTDKSLVKVTMLN 396

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 92.0 bits (229), Expect = 2e-21
 Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 13/212 (6%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84
             +      KD  L+KV  + IN  D    K      + R++P I   D AG V+   S 
Sbjct: 22  KTISTEDLPKDGVLIKVAYSGINYKDGLAGKA--GGNIVREYPLILGIDAAGTVV--SSN 77

Query: 85  VKNFKVGDKVVA------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ 138
              F  GD+V+A      V   GGL+E+A       V  PQ +S  E      AG TA  
Sbjct: 78  DPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAAL 137

Query: 139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ-LAKLGNTHVTATCGARNIELVKSLG 197
           ++ +    +   S ++ ++L+T A+G VG  AV  L K G   V +T      + +K LG
Sbjct: 138 SVHRLE--QNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLG 195

Query: 198 ADEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229
           A EV+  +      LK+ S +++   ++ V G
Sbjct: 196 ASEVISREDVYDGTLKALSKQQWQGAVDPVGG 227

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 94.2 bits (234), Expect = 3e-21
 Identities = 62/327 (18%), Positives = 119/327 (36%), Gaps = 29/327 (8%)

Query: 17   GGVAGLKHVEVPVPTP---NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASD 73
            G ++ ++ V  P+      +  + L  V   S+N  D  L  G L P        IP   
Sbjct: 1539 GDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSP------DSIPGKW 1592

Query: 74   VAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAG 133
            +  + +           G +V+ ++   GLA   +  +  T   P   +  E A +P   
Sbjct: 1593 LTRDCMLGMEFSGRDASGRRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVY 1652

Query: 134  LTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN---- 189
             TA+ +L     ++    G+  ++LI + SG VG  A+ +A      V  T G+      
Sbjct: 1653 TTAYYSLVVRGRMQ---PGE--SVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAY 1707

Query: 190  -IELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI 246
                   L      + +        L+  +G+  D V+N +           L   G+ +
Sbjct: 1708 LQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFL 1767

Query: 247  -----DFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP---KGENLDFLVKLVKEGKLKTVI 298
                 D + +  + +    K +TF    L            E  + L   ++EG ++ + 
Sbjct: 1768 EIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLK 1827

Query: 299  DSKHSLSKAEDAWAKSISGRATGKIIV 325
             +    +K E A+     G+  GK+++
Sbjct: 1828 CTVFPRTKVEAAFRYMAQGKHIGKVVI 1854

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 91.5 bits (228), Expect = 3e-21
 Identities = 88/374 (23%), Positives = 132/374 (35%), Gaps = 78/374 (20%)

Query: 1   MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           M+ K  M A+     G    G + VEV VP P   E L+KV A SI   D  + +     
Sbjct: 1   MSEK--MVAIMKTKPG---YGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWA 55

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVV------------------------- 95
               K P I   +VAGEV+ +G  V+  +VGD V                          
Sbjct: 56  QSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTK 115

Query: 96  --AVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGI-PCAGLTAHQALTQSLGVKLDGSG 152
              V + G  AE+AV         P+ +         P     A   +         G  
Sbjct: 116 IFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLG--NAVDTVLA-------GPI 166

Query: 153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNI----------ELVKSLGADEVL 202
             K++LIT A G +GL  + +AK          GA  +          EL K +GAD V+
Sbjct: 167 SGKSVLITGA-GPLGLLGIAVAKA--------SGAYPVIVSEPSDFRRELAKKVGADYVI 217

Query: 203 DYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPNLGTT---GKVIDF-NPSPRVLL 256
           +    D     +    G   D  +   +G P    E  L      G+V        +V  
Sbjct: 218 NPFEEDVVKEVMDITDGNGVDVFLEF-SGAP-KALEQGLQAVTPAGRVSLLGLYPGKV-- 273

Query: 257 TFAWKKLTFSKKQLVPFSVSPKGENLDF--LVKLVKEGKL--KTVIDSK-HSLSKAEDAW 311
           T  +  L   K   +            +  + +L++ GKL    +I  K     K E+A+
Sbjct: 274 TIDFNNLIIFKALTIYGITGRHLWE-TWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAF 332

Query: 312 AKSISGRATGKIIV 325
               +G+  GK++ 
Sbjct: 333 ELMRAGKT-GKVVF 345

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 89.7 bits (223), Expect = 1e-20
 Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 13/212 (6%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84
             + +    + + L++V  +S+N  D           + + +PF+P  D+AG V+   S+
Sbjct: 21  QTISMDDLPEGDVLVRVHYSSVNYKDGLASIP--DGKIVKTYPFVPGIDLAGVVV--SSQ 76

Query: 85  VKNFKVGDKVVA------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ 138
              F+ GD+V+A      V   GG +E+A       V  P+ ++  E   I  AG TA  
Sbjct: 77  HPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAAL 136

Query: 139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL-AKLGNTHVTATCGARNIELVKSLG 197
           ++ +    +   + ++  +L+T A+G VG  AV + AK G T   +T  A   + ++ LG
Sbjct: 137 SIHRLE--EHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLG 194

Query: 198 ADEVLDYKTPDGAALKSPSGRKYDAVINCVTG 229
           A EVL  +      ++    +++ A ++ V G
Sbjct: 195 AKEVLAREDVMAERIRPLDKQRWAAAVDPVGG 226

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 89.1 bits (222), Expect = 2e-20
 Identities = 81/337 (24%), Positives = 129/337 (38%), Gaps = 64/337 (18%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG- 80
            +   V +P     E LL+    S++P        M R            + + G+ +  
Sbjct: 26  FELKTVELPPLKNGEVLLEALFLSVDP-------YM-RIASK---RLKEGAVMMGQQVAR 74

Query: 81  -LGSEVKNFKVGDKVVAVLSGGGLAEFAVAKES----LTVARPQEV--SAAEGA-GIPCA 132
            + S+   F  G  V+A     G     ++       L    P ++  S A G  G+P  
Sbjct: 75  VVESKNSAFPAGSIVLAQS---GWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMP-- 129

Query: 133 GLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIE 191
           GLTA+  L +  GVK    G+   +L++AA+GAVG    Q+AKL    V    G    I 
Sbjct: 130 GLTAYFGLLEVCGVK---GGE--TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA 184

Query: 192 LVKSLGADEVLDYKTPD--GAALKS--PSGRKYDAVINC----VTGIPWSTFEPNLGTTG 243
            +K +G D   +YKT +    ALK   P G       +C    V G   +T    +   G
Sbjct: 185 YLKQIGFDAAFNYKTVNSLEEALKKASPDG------YDCYFDNVGGEFLNTVLSQMKDFG 238

Query: 244 KVI-----------DFNPSPRVLLTFAWKKLT---FSKKQLVP-FSVSPKGENLDFLVKL 288
           K+            D  P      +  +K+L    F    +V  +    + + L  L+K 
Sbjct: 239 KIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGF----IVYRWQGDVREKALRDLMKW 294

Query: 289 VKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIV 325
           V EGK++              A+ + ++G   GK +V
Sbjct: 295 VLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 88.9 bits (221), Expect = 2e-20
 Identities = 60/231 (25%), Positives = 85/231 (36%), Gaps = 18/231 (7%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A+  +   G         +        +  + V  +S+N  D     G  +  + R F
Sbjct: 1   MQALILEQQDGKTLA-SVQHLEESQLPAGDVTVDVHWSSLNYKDALAITG--KGKIIRHF 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVA------VLSGGGLAEFAVAKESLTVARPQE 120
           P IP  D AG V    SE   F  G +V+           GGLAE A  K    VA P  
Sbjct: 58  PMIPGIDFAGTVH--ASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAG 115

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ-LAKLGNT 179
           +S+     I  AG TA   +            Q   +++T ASG VG  AV  L KLG  
Sbjct: 116 LSSRNAMIIGTAGFTAMLCVMALE--DAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQ 173

Query: 180 HVTATCGARNIELVKSLGADEVLDYKT-PDGAALKSPSGRKYDAVINCVTG 229
               +        +KSLGA+ +L      +   L+      +   I+ V  
Sbjct: 174 VAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQ---LWAGAIDTVGD 221

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 88.8 bits (221), Expect = 3e-20
 Identities = 75/341 (21%), Positives = 125/341 (36%), Gaps = 61/341 (17%)

Query: 25  VEVPVPTPNKD-EALLKVEAASINP-IDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG-- 80
            EV +P    + +  ++    S++P +  ++ +     ++    P+  +  V G  IG  
Sbjct: 32  EEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYIT---PWQLSQVVDGGGIGII 88

Query: 81  LGSEVKNFKVGDKVVAVLSGGGLAEFAVAK-ESLTVARPQEV----SAAEGA-GIPCAGL 134
             S+  N   GD V +           +    SL    PQ V    S   GA G+P  GL
Sbjct: 89  EESKHTNLTKGDFVTSFY--WPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMP--GL 144

Query: 135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL-GNTHVTATCGARNIE-- 191
           T+   + +   +    +G  K ++++ A+GA G  A Q+    G + V   CG    E  
Sbjct: 145 TSLIGIQEKGHIT---AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH--EKC 199

Query: 192 --LVKSLGADEVLDYKTPD-GAALKS--PSGRKYDAVINC----VTGIPWSTFEPNLGTT 242
             L   LG D  ++YK  +    L+   P+G      ++     V G    T    +   
Sbjct: 200 ILLTSELGFDAAINYKKDNVAEQLRESCPAG------VDVYFDNVGGNISDTVISQMNEN 253

Query: 243 GKVI------DFN--------PSPRVLLTFAWKKLT---FSKKQLVPFSVSPKGENLDFL 285
             +I       +N         SP +      + +T   F    LV          +  L
Sbjct: 254 SHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERF----LVLNYKDKFEPGILQL 309

Query: 286 VKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
            +  KEGKLK      + L     A+   ++G   GK IV 
Sbjct: 310 SQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVC 350

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 87.2 bits (217), Expect = 9e-20
 Identities = 70/351 (19%), Positives = 119/351 (33%), Gaps = 65/351 (18%)

Query: 21  GLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG 80
           GL  V+ PVP P   E L++VEAASI   D  + K         + P +   + +G V  
Sbjct: 12  GLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEA 71

Query: 81  LGSEVKNFKVGDKV---------------------------VAVLSGGGLAEFAVAKESL 113
           +G  V+  +VGD V                           + V   GG AE+ V     
Sbjct: 72  VGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAEN 131

Query: 114 TVARPQEVSAAEGAGI-PCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ 172
               P+++     A + P     A   +              K++LIT A G +GL A  
Sbjct: 132 AWVNPKDLPFEVAAILEPFG--NAVHTVYAG-SGVSG-----KSVLITGA-GPIGLMAAM 182

Query: 173 LAKLGNTHVTATCGARNI----------ELVKSLGADEVLDYKTPDGAALKSPSGRKYDA 222
           + +          GA  I             +      V   +      ++  +G   + 
Sbjct: 183 VVRA--------SGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEV 234

Query: 223 VINCVTGIPWSTFEPNLGTT---GKVIDF-NPSPRVLLTFAWKKLTFSKKQLVPFSVSPK 278
           ++   +G   +     L      G+      PS  +    A  +L          +    
Sbjct: 235 LLEF-SGNE-AAIHQGLMALIPGGEARILGIPSDPIRFDLA-GELVMRGITAFGIAGRRL 291

Query: 279 GENLDFLVKLVKEGK--LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
            +       LV  G+  L  ++  +  LS+  +A+    SG+A  K+I++P
Sbjct: 292 WQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDP 341

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 83.9 bits (208), Expect = 2e-18
 Identities = 64/369 (17%), Positives = 114/369 (30%), Gaps = 65/369 (17%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A+       G      +E P P P   EAL++     +   D ++  G    F   + 
Sbjct: 1   MKAIAVKR---GEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGED 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVA------------------------------ 96
             +   +  G V+         + GD VV                               
Sbjct: 58  HLVLGHEAVGVVVDPN--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFER 115

Query: 97  --VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGI-PCAGLTAHQALTQSLGVKLDGSGQ 153
             V + G ++EF  + E   V  P+  +   G  I P +     +AL  +   +      
Sbjct: 116 GIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPIS--ITEKALEHAYASRSAFDWD 172

Query: 154 QKNILITAASGAVGLYAVQLAKL---GNTHVTATCG----ARNIELVKSLGADEVLDYKT 206
             +  +    G++GL  + + K+   G  ++            I++++ L A  V   +T
Sbjct: 173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQT 231

Query: 207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTT---GKVIDF----NPSPRVLLTFA 259
           P             D +    TG P      ++      G         + +  V     
Sbjct: 232 PVEDVPDVYEQ--MDFIYEA-TGFP-KHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAF 287

Query: 260 WKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK--LKTVIDSKHSLSKAEDAWAKSISG 317
            +++    K LV    S         V   K  K  L+ ++   H LS+ E A+      
Sbjct: 288 HREMVLHNKALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDD---D 344

Query: 318 RATGKIIVE 326
             T K  +E
Sbjct: 345 DTTIKTAIE 353

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 82.7 bits (205), Expect = 6e-18
 Identities = 59/387 (15%), Positives = 108/387 (27%), Gaps = 117/387 (30%)

Query: 21  GLKHVEVPVPTPNKDEALLKVEAASI-----NPIDWKLQKGMLRPFLPRKFPFIPASDVA 75
            L + E  +    +   L+++ +A +     +    +  +           P I   + A
Sbjct: 29  PLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV--------PLPIILGHEGA 80

Query: 76  GEVIGLGSEVKN-----FKVGDKVVAV-----------LSG------------------- 100
           G V+ +  E ++      K GD +V                                   
Sbjct: 81  GRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCS 140

Query: 101 ------GGLAEFAVAKESLTVAR-PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQ 153
                 G  +   V      V +  ++      A   C+G TA+ A  +       G   
Sbjct: 141 EYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFA-GK-- 197

Query: 154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNI----------ELVKSLGADEVLD 203
              ++I  A G +GL+ V +A+          GA N+          +L + +GAD  L+
Sbjct: 198 --TVVIQGA-GPLGLFGVVIARS--------LGAENVIVIAGSPNRLKLAEEIGADLTLN 246

Query: 204 YKTPDGAALKSP-----SGRKYDAVINCVTGIPWSTFEPNL------GTT--------GK 244
            +       +        GR  D ++    G                G            
Sbjct: 247 RRETSVEERRKAIMDITHGRGADFILEAT-GDS-RALLEGSELLRRGGFYSVAGVAVPQD 304

Query: 245 VIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF--LVKLVKEGKLK--TVIDS 300
            + F     ++     K  TF              +   F   V +          +I  
Sbjct: 305 PVPFKVYEWLV----LKNATFKG--------IWVSDTSHFVKTVSITSRNYQLLSKLITH 352

Query: 301 KHSLSKAEDAWAKSISGRATGKIIVEP 327
           +  L +A  A     S  A  K+I+ P
Sbjct: 353 RLPLKEANKALELMESREA-LKVILYP 378

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 79.5 bits (197), Expect = 5e-17
 Identities = 78/342 (22%), Positives = 130/342 (38%), Gaps = 62/342 (18%)

Query: 22  LKHVEVPVPTPNKD-EALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVI- 79
                V +  P      L+K    S +P      +  +    P       A    G+ I 
Sbjct: 25  FTTTTVELRVPEGTNSVLVKNLYLSCDP----YMRIRMGKPDPSTAALAQAYTP-GQPIQ 79

Query: 80  --GLG----SEVKNFKVGDKVVAVLSGGGLAEFAVAKES---LTVARPQEV--SAAEGA- 127
             G+     S   ++K GD +  ++      E++V           +  +V  S   G  
Sbjct: 80  GYGVSRIIESGHPDYKKGDLLWGIV---AWEEYSVITPMTHAHFKIQHTDVPLSYYTGLL 136

Query: 128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG- 186
           G+P  G+TA+    +    K    G+   + ++AASGAVG    QLAK+   +V  + G 
Sbjct: 137 GMP--GMTAYAGFYEVCSPK---EGE--TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS 189

Query: 187 ARNIELVKS-LGADEVLDYKT-PD-GAALKS--PSGRKYDAVINC----VTGIPWSTFEP 237
              ++L+K+  G D+  +YK   D  AALK   P+G      I+     V G        
Sbjct: 190 KEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNG------IDIYFENVGGKMLDAVLV 243

Query: 238 NLGTTGKVI------DFN----PSPRVLLTFAWKKLT---FSKKQLVPFSVSPKGENLDF 284
           N+   G++        +N         L    +K+     F    +V        + L+F
Sbjct: 244 NMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGF----VVSDFYDKYSKFLEF 299

Query: 285 LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE 326
           ++  ++EGK+  V D    L KA +A      G+  GK +V 
Sbjct: 300 VLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVV 341

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 78.8 bits (195), Expect = 1e-16
 Identities = 74/349 (21%), Positives = 128/349 (36%), Gaps = 61/349 (17%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWK-LQKGMLRPFLPRKFPFIPASDVAGEVIG 80
           L+    P+P P  +E LL++ +  I   D    + G +  F+ +K P +   + +G V  
Sbjct: 19  LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKK-PMVLGHEASGTVEK 77

Query: 81  LGSEVKNFKVGDKVVAV------------LSG-----------------GGLAEFAVAKE 111
           +GS VK+ K GD+V A+              G                 G L  F     
Sbjct: 78  VGSSVKHLKPGDRV-AIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNA 136

Query: 112 SLTVARPQEVSAAEGAGI-PCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYA 170
           +     P  V+  EGA I P +      A  +  GV L        +L+  A G +G+  
Sbjct: 137 AFCYKLPDNVTFEEGALIEPLS--VGIHACRRG-GVTLG-----HKVLVCGA-GPIGMVT 187

Query: 171 VQLAK-LGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDG----AALKSPSGRKYDAVI 224
           + +AK +G   V  T   A  +   K +GAD VL             ++   G K +  I
Sbjct: 188 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTI 247

Query: 225 NCVTGIPWSTFEPNLGTT---GKVIDF-NPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGE 280
            C TG   ++ +  +  T   G ++     S     T          +++    V     
Sbjct: 248 EC-TGAE-ASIQAGIYATRSGGTLVLVGLGSEMT--TVPLLHAAI--REVDIKGVFRYCN 301

Query: 281 NLDFLVKLVKEGK--LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP 327
                + ++      +K ++  +  L KA +A+     G    KI+++ 
Sbjct: 302 TWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLG-LKIMLKC 349

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 76.5 bits (189), Expect = 6e-16
 Identities = 58/249 (23%), Positives = 93/249 (37%), Gaps = 52/249 (20%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPID---WKLQKGMLRPFLPRKFPFIPASDVAGEV 78
           L+  + P+P P +DE LL++    I   D   +  + G +  F+ +  P +   + +G V
Sbjct: 16  LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYY--EHGRIADFIVKD-PMVIGHEASGTV 72

Query: 79  IGLGSEVKNFKVGDKVV-----------AVLSG-----------------GGLAEFAVAK 110
           + +G  VK+ K GD+V                G                 G LA + V  
Sbjct: 73  VKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHA 132

Query: 111 ESLTVARPQEVSAAEGAGI-PCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLY 169
                  P  VS  EGA + P +      A  ++      G      +L+  A G +GL 
Sbjct: 133 ADFCHKLPDNVSLEEGALLEPLS--VGVHACRRA------GVQLGTTVLVIGA-GPIGLV 183

Query: 170 AVQLAKLGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDG------AALKSPSGRKYDA 222
           +V  AK     V  T    R +E+ K+ GAD  L               ++S  G   + 
Sbjct: 184 SVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNV 243

Query: 223 VINCVTGIP 231
            I+C +G  
Sbjct: 244 TIDC-SGNE 251

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 67.6 bits (166), Expect = 1e-13
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 8/121 (6%)

Query: 112 SLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAV 171
            L V  P  ++  E A    A LTA  +L +   +     G++  +LI +A+G VG+ AV
Sbjct: 2   DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLS---PGER--VLIHSATGGVGMAAV 56

Query: 172 QLAKLGNTHVTATCGARN-IELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVT 228
            +AK+    +  T G+    E++  LG + V D ++ D A   L+   G   D V+N + 
Sbjct: 57  SIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA 116

Query: 229 G 229
           G
Sbjct: 117 G 117

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 68.4 bits (168), Expect = 4e-13
 Identities = 58/223 (26%), Positives = 89/223 (39%), Gaps = 49/223 (21%)

Query: 63  PRKFPFIPASDVAGEVIGLGSEVKNFKVGDKV-VAVLSG--------------------- 100
              +P +P  +V GEV+ +GS+V  F VGD V V  L G                     
Sbjct: 60  MSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIW 119

Query: 101 -------------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVK 147
                        GG A+  V  +   V  P+ ++  + A + CAG+T +  L+      
Sbjct: 120 SYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHF---G 176

Query: 148 LDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHVTA--TCGARNIELVKSLGADEVLDY 204
           L   G +  IL     G VG   V++AK +G  HVT   +   +  E ++ LGAD+ +  
Sbjct: 177 LKQPGLRGGILGL---GGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGADDYVI- 231

Query: 205 KTPDGAALKSPSGRKYDAVINCV-TGIPWSTFEPNLGTTGKVI 246
              D A +   +    D VI+ V        +   L   GK+I
Sbjct: 232 -GSDQAKMSELADS-LDYVIDTVPVHHALEPYLSLLKLDGKLI 272

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 65.7 bits (161), Expect = 3e-12
 Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 49/223 (21%)

Query: 63  PRKFPFIPASDVAGEVIGLGSEVKNFKVGDKV-VAVLSG--------------------- 100
              +P +P  ++ GEV  +GS+VK   VGDKV V  L G                     
Sbjct: 67  FSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMIL 126

Query: 101 -------------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVK 147
                        GG +   VA E   +  P  +    GA + CAG+T +  L       
Sbjct: 127 TYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYF---G 183

Query: 148 LDGSGQQKNILITAASGAVGLYAVQLAK-LGNTHVTA--TCGARNIELVKSLGADEVLDY 204
           LD  G+   I+     G +G  AV+ AK  G + VT   T  ++  E +K+ GAD  L  
Sbjct: 184 LDEPGKHIGIVGL---GGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGADSFLV- 238

Query: 205 KTPDGAALKSPSGRKYDAVINCV-TGIPWSTFEPNLGTTGKVI 246
            + D   +++ +G   D +I+ V    P       L + GK+I
Sbjct: 239 -SRDQEQMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLI 279

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 64.2 bits (157), Expect = 9e-12
 Identities = 65/374 (17%), Positives = 120/374 (32%), Gaps = 75/374 (20%)

Query: 5   AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPID---WKLQKGMLRPF 61
              +             L+ V+       + E  + V +  I   D   W  + G + P 
Sbjct: 12  VFTNPQHDLWISEASPSLESVQKG-EELKEGEVTVAVRSTGICGSDVHFW--KHGCIGPM 68

Query: 62  LPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVV-----------AVLSG---------- 100
           +      +   + AGEVI +   VK+ KVGD+V              L+G          
Sbjct: 69  IVEC-DHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDF 127

Query: 101 -------GGLAEFAVAKESLTVARPQEVSAAEGAGI-PCAGLTAHQALTQSLGVKLDGSG 152
                  G L  +              +S   GA + P +   A   L ++ GV+L    
Sbjct: 128 LSTPPVPGLLRRYVNHPAVWCHKIG-NMSYENGAMLEPLS--VALAGLQRA-GVRLG--- 180

Query: 153 QQKNILITAASGAVGLYAVQLAK-LGNTHVTAT-CGARNIELVKSLGADEVLDYKTPDGA 210
               +LI  A G +GL  +  AK  G   +  T      ++  K +  + V        A
Sbjct: 181 --DPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSA 237

Query: 211 ------ALKSPSGRKYDAVINCVTGIPWSTFEPNLGTT---GKVIDFNPSPRVLLTFAWK 261
                  ++S  G +    + C TG+  S+    +      GKV         ++     
Sbjct: 238 EESAKKIVESFGGIEPAVALEC-TGVE-SSIAAAIWAVKFGGKV--------FVIGVGKN 287

Query: 262 KLTFSKKQLVPFSVSPKG-----ENLDFLVKLVKEGK--LKTVIDSKHSLSKAEDAWAKS 314
           ++     +     V  +            ++LV+ G   L  ++  +  L  A  A+  +
Sbjct: 288 EIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETA 347

Query: 315 ISGRATG-KIIVEP 327
              +    K+ ++ 
Sbjct: 348 SDPKTGAIKVQIQS 361

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 46/230 (20%), Positives = 78/230 (33%), Gaps = 63/230 (27%)

Query: 63  PRKFPFIPASDVAGEVIGLGSEVKNFKVGDKV-VAVLSG--------------------- 100
              +P +P  ++ G V+ +G +V+ +  GD V V  +                       
Sbjct: 73  GTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG 132

Query: 101 --------------GGLAEFAVAKESLTVARPQEVSAAEGAGIP--CAGLTAHQALTQSL 144
                         GG ++  V  E   +              P  CAG+T +  L    
Sbjct: 133 TYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVA-PLLCAGITTYSPLRHW- 190

Query: 145 GVKLDGSGQQKNILITAASGAVGL-----YAVQLAK-LGNTHVTA-TCGARNIELVKSLG 197
                 +G  K +      G VG+       ++LA  +G  HV A T      E  K+LG
Sbjct: 191 -----QAGPGKKV------GVVGIGGLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKALG 238

Query: 198 ADEVLDYKTPDGAALKSPSGRKYDAVINCV-TGIPWSTFEPNLGTTGKVI 246
           ADEV++  + +   + +     +D ++N V        F   L   G + 
Sbjct: 239 ADEVVN--SRNADEMAAHLKS-FDFILNTVAAPHNLDDFTTLLKRDGTMT 285

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 40/229 (17%), Positives = 68/229 (29%), Gaps = 66/229 (28%)

Query: 63  PRKFPFIPASDVAGEVIGLGSEVKNFKVGDKV-VAVLSG--------------------- 100
              +P IP  ++AG +  +G  VK FK+GD V V                          
Sbjct: 55  EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVF 114

Query: 101 ---------------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLG 145
                          GG +   V  E+  ++  +     + A + CAG+T +  L  S  
Sbjct: 115 TYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFS-- 172

Query: 146 VKLDGSGQQKNILITAASGAVGL-----YAVQLAK-LGNTHVTA-TCGARNIELVKSLGA 198
                  +   +      G  G       AV+ A  +G   V+         +   S+G 
Sbjct: 173 ----KVTKGTKV------GVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSMGV 221

Query: 199 DEVLDYKTPDGAALKSPSGRKYDAVINCV-TGIPWSTFEPNLGTTGKVI 246
                   P           + D +I+ + T      +   L   G + 
Sbjct: 222 KHFYT--DPKQCK------EELDFIISTIPTHYDLKDYLKLLTYNGDLA 262

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 57/377 (15%), Positives = 107/377 (28%), Gaps = 70/377 (18%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPT-PNKDEALLKVEAASI-----NPIDWKLQKGMLRP 60
           M A+         AG++  +V      +  +  ++     I       ++ KL       
Sbjct: 1   MKAIIVK---PPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLS---T 54

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAV-----------LSG--------- 100
               K   +   +  G V         F  GD V+ V           L G         
Sbjct: 55  LPKGKDFLVLGHEAIGVV---EESYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGE 111

Query: 101 ----------GGLAEFAVAKESLTVARPQEVSAAEGAGI-P--CAGLTAHQAL----TQS 143
                     G + E+        V  P+ +    G    P      +  + L       
Sbjct: 112 FGEAGIHKMDGFMREWWYDDPKYLVKIPKSIED-IGILAQPLADIEKSIEEILEVQKRVP 170

Query: 144 LGVKLDGSGQQKNILITAASGAVGLYAVQLAKL-GNTHVTATCGARN-IELVKSLGADEV 201
           +    DG+   + +L+    G +G+    L +  G     A       +E          
Sbjct: 171 VWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTN 229

Query: 202 LDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFE---PNLGTTGKVIDF--NPSPRVLL 256
               +     LK   G+ +D +I+  TG   +      P LG  G +  F  + S  V L
Sbjct: 230 YYNSSNGYDKLKDSVGK-FDVIIDA-TGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPL 287

Query: 257 TFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK------LKTVIDSKHSLSKAEDA 310
            +   +      + +   V+ +  +    V  +   K       K +I    S++  ++ 
Sbjct: 288 DYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKEL 347

Query: 311 WAKSISGRATG-KIIVE 326
                       KI + 
Sbjct: 348 LKVLREKEHGEIKIRIL 364

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 61.8 bits (151), Expect = 6e-11
 Identities = 68/370 (18%), Positives = 109/370 (29%), Gaps = 103/370 (27%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPID-WKLQKGMLRPFLPRK 65
           M          G  G    E   P P   +A+++  A +    D   + +G         
Sbjct: 1   MKGFAM--LSIGKVGWI--EKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGA-------- 48

Query: 66  FPFIPASDV-----AGEVIGLGSEVKNFKVGDKVVA------------------------ 96
                 + +      GEV+ +GSEVK+FK GD+VV                         
Sbjct: 49  -IGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGML 107

Query: 97  ---VLSG---GGLAEFA---VAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVK 147
                S    G   EF     A  +L    P+E+       IP    T      +   +K
Sbjct: 108 AGWKFSNVKDGVFGEFFHVNDADMNL-AHLPKEIPLEAAVMIPDMMTTGFHG-AELANIK 165

Query: 148 LDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNI----------ELVKSLG 197
           L  +     + +    G VGL +V  A           GA  I          ++    G
Sbjct: 166 LGDT-----VCVIGI-GPVGLMSVAGANH--------LGAGRIFAVGSRKHCCDIALEYG 211

Query: 198 ADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEP------------NLGTTG 243
           A ++++YK  D     LK+  G+  D V+    G    TF              N+   G
Sbjct: 212 ATDIINYKNGDIVEQILKATDGKGVDKVVIAG-GDV-HTFAQAVKMIKPGSDIGNVNYLG 269

Query: 244 KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT--VIDSK 301
           +  +    PR                            ++ L+ LV   ++    ++   
Sbjct: 270 EGDNI-DIPRSEWGVGMGHKHIHGGL-----CPGGRLRMERLIDLVFYKRVDPSKLVTHV 323

Query: 302 -HSLSKAEDA 310
                  E A
Sbjct: 324 FRGFDNIEKA 333

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 42/227 (18%), Positives = 78/227 (34%), Gaps = 55/227 (24%)

Query: 63  PRKFPFIPASDVAGEVIGLGSEV-KNFKVGDKV-VAVLSG-------------------- 100
             K P +   ++ G+V+ LG +     KVG +V V                         
Sbjct: 59  NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFV 118

Query: 101 --------------GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGV 146
                         GG A +    E   V  P+ + +   A + C GLT +  L ++ G 
Sbjct: 119 TTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRN-GC 177

Query: 147 KLDGSGQQKNILITAASGAVGL--YAVQLAK-LGNTHVTA-TCGARNIELVKSLGADEVL 202
              G G++  I+     G  G+      ++K +G       +  +R  E    +GAD  +
Sbjct: 178 ---GPGKKVGIV-----GLGGIGSMGTLISKAMG-AETYVISRSSRKREDAMKMGADHYI 228

Query: 203 DYKTPDGAALKSPSGRKYDAVINCV---TGIPWSTFEPNLGTTGKVI 246
              T +           +D ++ C    T I ++     +   G+++
Sbjct: 229 A--TLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIV 273

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 4/79 (5%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81
           L    + V  P   E  +K+ A+ I   D  + K ++    P KFP I   +  G V  +
Sbjct: 22  LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEII----PSKFPVILGHEAVGVVESI 77

Query: 82  GSEVKNFKVGDKVVAVLSG 100
           G+ V   K GDKV+ +   
Sbjct: 78  GAGVTCVKPGDKVIPLFVP 96

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 48.3 bits (116), Expect = 1e-06
 Identities = 59/270 (21%), Positives = 91/270 (33%), Gaps = 85/270 (31%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE 84
             + +  P  DE L+KV A  +   D  ++        P   P +   + +G +  +G  
Sbjct: 22  QALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY----PVPLPAVLGHEGSGIIEAIGPN 77

Query: 85  VKNFKVGDKVV-----------------------AVLSGGGL------------------ 103
           V   +VGD VV                          +  G                   
Sbjct: 78  VTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVND 137

Query: 104 --------AEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQK 155
                   A +A+++E+ TV   ++V       + C   T   A   +L V    S    
Sbjct: 138 HFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTP-AS---- 192

Query: 156 NILITAA---SGAVGLYAVQLAKLGNTHVTATCGARNI----------ELVKSLGADEVL 202
               +     +GAVGL A+  AK+        CGA  I          EL K LGA  V+
Sbjct: 193 ----SFVTWGAGAVGLSALLAAKV--------CGASIIIAVDIVESRLELAKQLGATHVI 240

Query: 203 DYKTPD-GAALKSPSGRKYDAVINCVTGIP 231
           + KT D  AA+K  +    +  +   TG P
Sbjct: 241 NSKTQDPVAAIKEITDGGVNFALES-TGSP 269

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 21  GLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG 80
                EV V  P   E  +K+ A  I   D  +  G L        P I   + AG V  
Sbjct: 20  PFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL----VTPLPVIAGHEAAGIVES 75

Query: 81  LGSEVKNFKVGDKVVAVLSG 100
           +G  V   + GDKV+ + + 
Sbjct: 76  IGEGVTTVRPGDKVIPLFTP 95

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85
           E+ V  P   E  ++V A  + P D               FP +   + AG V  +G  V
Sbjct: 25  EIEVSPPKACEVRIQVIATCVCPTDINATDPKK----KALFPVVLGHECAGIVESVGPGV 80

Query: 86  KNFKVGDKVVAVLSG 100
            NFK GDKV+   + 
Sbjct: 81  TNFKPGDKVIPFFAP 95

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 2e-04
 Identities = 56/332 (16%), Positives = 104/332 (31%), Gaps = 103/332 (31%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKL---QKGMLRPF----LPRKFPFIPASDV 74
           + H+   + + +     L+        + W L   Q+ M++ F    L   + F+  S +
Sbjct: 51  IDHI---IMSKDAVSGTLR--------LFWTLLSKQEEMVQKFVEEVLRINYKFL-MSPI 98

Query: 75  AGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGL 134
             E        + +    +    L       FA       V+R Q              L
Sbjct: 99  KTEQRQPSMMTRMY---IEQRDRLYNDN-QVFA----KYNVSRLQPY------------L 138

Query: 135 TAHQALTQ---SLGVKLDG---SGQQKNILITAASGAVGLYAVQLA--------KLGNTH 180
              QAL +   +  V +DG   SG  K  +   A      Y VQ           L N +
Sbjct: 139 KLRQALLELRPAKNVLIDGVLGSG--KTWV---ALDVCLSYKVQCKMDFKIFWLNLKNCN 193

Query: 181 VTATCGARNIELVKSLGADEVLDYKT-PDGAA---LKSPSGRKYDAVI-------NC--- 226
              T     +E+++ L      ++ +  D ++   L+  S +     +       NC   
Sbjct: 194 SPETV----LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249

Query: 227 ---VTGIPWSTFEPNLGTTGKVID-FNPSPRVLLTFAWKKLTFSKKQLVPFSVS------ 276
              V     +          K  + FN S ++LLT  +K++T          +S      
Sbjct: 250 LLNV----QNA---------KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 277 --PKGENLDFLVKLV--KEGKLKTVIDSKHSL 304
                E    L+K +  +   L   + + +  
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 26  EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV 85
           E+ V  P   E  +K+ A ++   D     G         FP I     AG V  +G  V
Sbjct: 23  EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA---DPEGCFPVILGHLGAGIVESVGEGV 79

Query: 86  KNFKVGDKVVAVLSG 100
              K GD V+ +   
Sbjct: 80  TKLKAGDTVIPLYIP 94

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 21  GLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG 80
            L   E+ V  P+ +E  +K+ A  +   D               FP +   + AG V  
Sbjct: 20  PLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFE---GKHKDGFPVVLGHEGAGIVES 76

Query: 81  LGSEVKNFKVGDKVVAVLSG 100
           +G  V  F+ G+KV+ +   
Sbjct: 77  VGPGVTEFQPGEKVIPLFIS 96

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	327
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.88
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.7
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.62
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.62
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.49
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.43
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.16
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.14
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.13
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.89
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.8
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.68
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.62
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.59
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.56
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.55
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.54
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.49
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.46
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.43
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.38
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.3
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.3
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.13
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	97.06
3c85_A	183	Putative glutathione-regulated potassium-efflux S	96.93
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.92
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	96.92
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.92
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	96.91
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.91
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.9
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.9
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.87
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.87
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.87
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.86
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.86
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.84
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.82
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.81
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.81
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.8
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.8
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.77
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.77
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.72
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.72
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.72
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.7
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.7
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.68
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.68
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.67
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.67
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.67
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.66
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.65
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.64
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.62
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	96.58
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.56
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.56
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.54
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.54
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.54
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.53
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.53
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.51
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.48
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.48
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.48
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.48
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.46
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.46
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.46
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.45
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.45
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.45
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.43
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.43
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.42
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.42
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.39
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.39
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.38
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.38
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.37
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.37
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.37
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.36
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.35
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.35
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.34
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.34
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.32
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.32
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.32
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.31
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.3
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.29
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.28
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.28
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.28
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.28
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.28
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.27
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.27
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.27
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.26
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.26
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.26
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.26
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.25
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.25
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.24
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.23
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.23
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.22
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.22
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.22
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.21
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.21
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.21
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.21
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.21
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.19
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.18
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.18
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.18
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.17
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.16
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.16
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.14
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.14
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.14
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.14
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.13
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	96.13
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.13
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.13
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.12
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.11
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.11
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.11
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.1
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.09
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.09
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.09
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.08
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.08
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.07
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.06
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.06
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.06
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.05
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.05
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.04
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.04
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.04
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.04
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.03
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.03
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.03
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.03
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.02
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.02
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.02
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.02
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.02
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.02
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.01
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	95.99
3cxt_A	291	Dehydrogenase with different specificities; rossma	95.98
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.97
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.97
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.96
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	95.96
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	95.96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	95.95
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.95
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.95
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	95.95
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.95
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.94
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	95.94
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.93
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.93
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	95.92
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	95.92
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.92
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.92
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	95.92
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	95.92
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	95.91
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.9
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.88
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.87
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.85
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.84
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	95.84
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.83
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.82
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.8
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.78
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.78
1xq1_A	266	Putative tropinone reducatse; structural genomics,	95.77
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.77
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.74
1spx_A	278	Short-chain reductase family member (5L265); paral	95.74
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.73
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	95.72
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.71
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	95.71
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.71
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	95.69
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.69
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.68
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	95.68
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.68
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.67
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.66
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.65
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	95.64
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	95.63
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	95.63
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	95.63
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.56
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	95.52
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.52
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.52
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	95.52
1xhl_A	297	Short-chain dehydrogenase/reductase family member	95.51
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.51
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	95.49
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	95.49
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.48
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	95.47
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.46
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.45
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	95.45
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.45
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.44
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	95.44
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	95.43
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	95.41
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	95.41
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.4
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.4
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.4
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.38
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.38
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.36
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.34
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.32
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.29
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.28
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	95.27
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	95.26
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.23
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	95.22
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.22
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.21
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.21
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.2
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.18
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.16
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	95.16
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	95.15
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.13
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	95.12
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.11
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.08
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.06
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.04
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.04
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.03
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.01
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	95.01
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	95.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	94.98
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	94.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	94.96
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	94.95
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	94.93
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	94.92
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.92
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	94.91
4e4y_A	244	Short chain dehydrogenase family protein; structur	94.91
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	94.9
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	94.9
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	94.89
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	94.89
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	94.88
4f6c_A	427	AUSA reductase domain protein; thioester reductase	94.88
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	94.88
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	94.87
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	94.86
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	94.85
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	94.85
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	94.84
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	94.83
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	94.82
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	94.82
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	94.8
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	94.8
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	94.76
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	94.74
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	94.73
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	94.73
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	94.73
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	94.73
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	94.71
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	94.71
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	94.7
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	94.69
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	94.66
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	94.64
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	94.63
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	94.62
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	94.62
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	94.6
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	94.6
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	94.58
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	94.57
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	94.56
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	94.55
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	94.53
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	94.5
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	94.5
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.48
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	94.46
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	94.38
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	94.37
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	94.35
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	94.34
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	94.33
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	94.32
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	94.32
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.3
1xkq_A	280	Short-chain reductase family member (5D234); parra	94.28
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	94.25
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	94.23
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	94.22
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	94.22
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	94.22
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	94.22
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	94.19
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	94.17
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	94.15
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	94.15
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	94.12
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	94.12
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	94.11
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	94.07
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	94.06
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	94.04
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	94.03
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	94.0
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	94.0
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	94.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	93.99
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	93.96
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	93.94
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	93.89
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	93.89
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	93.88
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	93.87
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	93.85
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	93.85
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	93.82
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	93.8
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	93.75
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	93.7
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	93.69
1id1_A	153	Putative potassium channel protein; RCK domain, E.	93.68
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	93.67
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	93.65
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	93.62
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	93.6
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	93.6
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	93.59
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	93.59
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	93.58
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	93.57
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	93.54
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	93.54
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	93.53
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	93.52
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	93.51
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	93.49
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	93.4
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	93.37
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	93.34
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	93.33
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	93.32
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	93.31
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	93.3
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	93.3
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	93.3
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	93.22
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	93.2
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	93.2
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	93.18
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	93.15
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	93.07
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	93.0
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	92.96
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	92.93
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	92.86
4had_A	350	Probable oxidoreductase protein; structural genomi	92.84
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	92.82
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	92.81
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	92.8
3f4k_A	257	Putative methyltransferase; structural genomics, P	92.79
3gdo_A	358	Uncharacterized oxidoreductase YVAA; structural ge	92.79
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	92.7
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	92.64
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	92.61
4f6l_B	508	AUSA reductase domain protein; thioester reductase	92.56
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	92.53
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	92.52
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	92.51
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	92.51
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	92.49
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	92.45

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=1.2e-57  Score=405.26  Aligned_cols=318  Identities=23%  Similarity=0.358  Sum_probs=278.6

Q ss_pred             CCCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEe
Q 020314            1 MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG   80 (327)
Q Consensus         1 m~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   80 (327)
                      |+.|.+|||+++.++|. ++.+++++.+.|+|.++||+|||.++|||++|++.+.|.++.  +..+|.++|||++|+|++
T Consensus        23 ~~~p~~MkA~~~~~~g~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~   99 (353)
T 4dup_A           23 MSLPQEMRFVDLKSFGG-PDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPP--PKDASPILGLELSGEIVG   99 (353)
T ss_dssp             CCCCSSEEEEEESSSSS-GGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCC--CTTSCSSSCCEEEEEEEE
T ss_pred             CCCChheeEEEEccCCC-ccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCccccccEEEEEE
Confidence            67899999999999886 688999999999999999999999999999999999998752  235789999999999999


Q ss_pred             cCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE
Q 020314           81 LGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT  160 (327)
Q Consensus        81 vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~  160 (327)
                      +|+++++|++||||+++..+|+|+||++++++.++++|+++++++||+++.+++|||+++.+.+++     ++|++|||+
T Consensus       100 vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~-----~~g~~VlV~  174 (353)
T 4dup_A          100 VGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGL-----TEGESVLIH  174 (353)
T ss_dssp             ECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCC-----CTTCEEEES
T ss_pred             ECCCCCCCCCCCEEEEecCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCC-----CCCCEEEEE
Confidence            999999999999999988899999999999999999999999999999999999999999888888     899999999


Q ss_pred             cCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCccccccc
Q 020314          161 AASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEP  237 (327)
Q Consensus       161 g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~  237 (327)
                      ||+|++|++++|+|+..|++|+++++ ++++++++++|++.++++++.+.  .+.+.+ ++++|++|||+|++.+..+++
T Consensus       175 Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~  253 (353)
T 4dup_A          175 GGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAET-GQGVDIILDMIGAAYFERNIA  253 (353)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH-SSCEEEEEESCCGGGHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHh-CCCceEEEECCCHHHHHHHHH
Confidence            99999999999999999999999995 57889999999999999887662  233334 678999999999988999999


Q ss_pred             ccCCCcEEEeecCCchhHHH-HhhhhccccceeeEEEEeCCCH---------HHHHHHHHHHHCCceeEecceeeccccH
Q 020314          238 NLGTTGKVIDFNPSPRVLLT-FAWKKLTFSKKQLVPFSVSPKG---------ENLDFLVKLVKEGKLKTVIDSKHSLSKA  307 (327)
Q Consensus       238 ~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~g~l~~~~~~~~~~~~~  307 (327)
                      +++++|+++.+|...+.... +....+..+++++.+.......         +.++++++++++|+++++++++|+++++
T Consensus       254 ~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~  333 (353)
T 4dup_A          254 SLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDV  333 (353)
T ss_dssp             TEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEGGGH
T ss_pred             HhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeHHHH
Confidence            99999999999865433222 3444556677777775432221         1278899999999999999999999999


Q ss_pred             HHHHHHHhcCCCCccEEEeC
Q 020314          308 EDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       308 ~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++|++.+.+++..||+|+++
T Consensus       334 ~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          334 ADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHhCCCCceEEEeC
Confidence            99999999999999999975

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.7e-56  Score=393.21  Aligned_cols=310  Identities=34%  Similarity=0.437  Sum_probs=270.5

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcC--CCCCCCCCCCeeecccceEEEEec
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGM--LRPFLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~--~~~~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      +++|||+++.++|+ ++.+++++.+.|+|.++||+|||.++|||++|++++.|.  ++...+..+|.++|||++|+|+++
T Consensus         4 m~~Mka~~~~~~g~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~v   82 (321)
T 3tqh_A            4 MKEMKAIQFDQFGP-PKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIEL   82 (321)
T ss_dssp             -CEEEEEEESSSCS-GGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEE
T ss_pred             cccceEEEEccCCC-cceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEe
Confidence            35799999999987 688999999999999999999999999999999999883  110012367899999999999999


Q ss_pred             CCCCCCCCCCCEEEEEc----cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeE
Q 020314           82 GSEVKNFKVGDKVVAVL----SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNI  157 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~----~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~v  157 (327)
                      |+++++|++||||++..    .+|+|+||++++++.++++|+++++++||+++++++|||+++ +.+++     ++|++|
T Consensus        83 G~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~-----~~g~~v  156 (321)
T 3tqh_A           83 GSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEV-----KQGDVV  156 (321)
T ss_dssp             CTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTC-----CTTCEE
T ss_pred             CCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCC-----CCCCEE
Confidence            99999999999999875    469999999999999999999999999999999999999999 78888     899999


Q ss_pred             EEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCCCcccccc
Q 020314          158 LITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWSTFE  236 (327)
Q Consensus       158 lV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~  236 (327)
                      ||+||+|++|++++|+|+..|++|+++++++++++++++|++.++|+++.+ ....  .  +++|++|||+|++....++
T Consensus       157 lV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~--~--~g~D~v~d~~g~~~~~~~~  232 (321)
T 3tqh_A          157 LIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAI--S--TPVDAVIDLVGGDVGIQSI  232 (321)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHC--C--SCEEEEEESSCHHHHHHHG
T ss_pred             EEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhh--c--cCCCEEEECCCcHHHHHHH
Confidence            999999999999999999999999999877778899999999999987765 3211  1  5799999999988889999


Q ss_pred             cccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhc
Q 020314          237 PNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSIS  316 (327)
Q Consensus       237 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~  316 (327)
                      ++++++|+++.+|.......   ...+..+++++.+++.....++++++++++++|++++.++++|+++++++||+.+.+
T Consensus       233 ~~l~~~G~iv~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~  309 (321)
T 3tqh_A          233 DCLKETGCIVSVPTITAGRV---IEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLET  309 (321)
T ss_dssp             GGEEEEEEEEECCSTTHHHH---HHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHT
T ss_pred             HhccCCCEEEEeCCCCchhh---hhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCcccccccEEcHHHHHHHHHHHHc
Confidence            99999999999986543321   123445666666644456788999999999999999999999999999999999999


Q ss_pred             CCCCccEEEeC
Q 020314          317 GRATGKIIVEP  327 (327)
Q Consensus       317 ~~~~gkvvv~~  327 (327)
                      ++..||+|+++
T Consensus       310 ~~~~gKvvl~~  320 (321)
T 3tqh_A          310 GHVRGKLVFKV  320 (321)
T ss_dssp             TCCCSEEEEEC
T ss_pred             CCCCceEEEEe
Confidence            99999999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=4.3e-56  Score=393.67  Aligned_cols=314  Identities=25%  Similarity=0.338  Sum_probs=270.9

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .|.+|||+++.++++ ++.+++++.+.|+|.+|||+|||.++|||++|++++.|.++.  ...+|.++|||++|+|+++|
T Consensus        18 ~p~~MkA~~~~~~g~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~vG   94 (342)
T 4eye_A           18 GPGSMKAIQAQSLSG-PEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQL--KMEPPFVPGIETAGVVRSAP   94 (342)
T ss_dssp             CCCEEEEEEECSSSG-GGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSS--CCCSSBCCCSEEEEEEEECC
T ss_pred             CCcceEEEEEecCCC-CceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCCccceeEEEEEEEEC
Confidence            488999999999886 678999999999999999999999999999999999998642  23679999999999999999


Q ss_pred             CCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcC
Q 020314           83 SEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAA  162 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~  162 (327)
                      ++++ |++||||+++..+|+|+||++++++.++++|+++++++||+++.+++|||+++.+..++     ++|++|||+|+
T Consensus        95 ~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~-----~~g~~VlV~Ga  168 (342)
T 4eye_A           95 EGSG-IKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQL-----RAGETVLVLGA  168 (342)
T ss_dssp             TTSS-CCTTCEEEEECSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCC-----CTTCEEEESST
T ss_pred             CCCC-CCCCCEEEEecCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCC-----CCCCEEEEECC
Confidence            9999 99999999988899999999999999999999999999999999999999999888888     89999999999


Q ss_pred             CChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCccccccccc
Q 020314          163 SGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNL  239 (327)
Q Consensus       163 ~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l  239 (327)
                      +|++|++++|+|++.|++|+++++ ++++++++++|++.+++++ .+  ..+.+.++++++|++|||+|++.+..+++++
T Consensus       169 sg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~l  247 (342)
T 4eye_A          169 AGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTL  247 (342)
T ss_dssp             TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC--CHHHHHHTE
T ss_pred             CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchhHHHHHHHhh
Confidence            999999999999999999999985 5788999999999999988 44  2344556667899999999998899999999


Q ss_pred             CCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC------C--CHHHHHHHHHHHHCCceeEecceeeccccHHHHH
Q 020314          240 GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS------P--KGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAW  311 (327)
Q Consensus       240 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~  311 (327)
                      +++|+++.+|...+....+....+..+++++.++...      +  ..+.++.+++++++| ++++++++|+++++++||
T Consensus       248 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~  326 (342)
T 4eye_A          248 ASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQAL  326 (342)
T ss_dssp             EEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHHH
T ss_pred             cCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHHHHHH
Confidence            9999999999765443444555667778887774321      1  135689999999999 999999999999999999


Q ss_pred             HHHhcCCCCccEEEeC
Q 020314          312 AKSISGRATGKIIVEP  327 (327)
Q Consensus       312 ~~~~~~~~~gkvvv~~  327 (327)
                      +.+.+++..||+|++|
T Consensus       327 ~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          327 QDFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHHTTCCCSEEEEEC
T ss_pred             HHHHhCCCCceEEEeC
Confidence            9999999999999976

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=4.5e-56  Score=392.73  Aligned_cols=315  Identities=25%  Similarity=0.334  Sum_probs=274.4

Q ss_pred             CCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314            2 AGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         2 ~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      +.|.+|||+++.++|+ ++.+++++.+.|+|.++||+|||.++|||++|++++.|.++    ..+|.++|||++|+|+++
T Consensus         4 ~~p~~mka~~~~~~g~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~----~~~P~i~G~e~~G~V~~v   78 (334)
T 3qwb_A            4 TIPEQQKVILIDEIGG-YDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP----CEKPYVLGREASGTVVAK   78 (334)
T ss_dssp             -CCSEEEEEEESSSSS-GGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC----CCSSEECCSEEEEEEEEE
T ss_pred             CCchheEEEEEecCCC-CceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC----CCCCCccccceEEEEEEE
Confidence            4799999999999887 68899999999999999999999999999999999999864    357999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEccCcccceeEeec-CCceeeCCCCCChhh---hcccCchHHHHHHHHHHhhCCccCCCCCCCeE
Q 020314           82 GSEVKNFKVGDKVVAVLSGGGLAEFAVAK-ESLTVARPQEVSAAE---GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNI  157 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~~~g~~a~~~~~~-~~~~~~ip~~~~~~~---aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~v  157 (327)
                      |+++++|++||||++. .+|+|+||++++ ++.++++|+++++++   ++++++.+.|||+++.+..++     ++|++|
T Consensus        79 G~~v~~~~~GdrV~~~-~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~-----~~g~~v  152 (334)
T 3qwb_A           79 GKGVTNFEVGDQVAYI-SNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHV-----KKGDYV  152 (334)
T ss_dssp             CTTCCSCCTTCEEEEE-CSSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCC-----CTTCEE
T ss_pred             CCCCCCCCCCCEEEEe-eCCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccC-----CCCCEE
Confidence            9999999999999985 589999999999 999999999999999   888899999999999877788     899999


Q ss_pred             EEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccc
Q 020314          158 LITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWST  234 (327)
Q Consensus       158 lV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~  234 (327)
                      ||+||+|++|++++|+|+..|++|+++++ ++++++++++|++.++++++.+  ..+.+.++++++|++|||+|++.+..
T Consensus       153 lV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~  232 (334)
T 3qwb_A          153 LLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEI  232 (334)
T ss_dssp             EESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGGGHHH
T ss_pred             EEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChHHHHH
Confidence            99999999999999999999999999996 4788899999999999987766  23445566778999999999988999


Q ss_pred             cccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe---CCCHH----HHHHHHHHHHCCceeEecceeeccccH
Q 020314          235 FEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV---SPKGE----NLDFLVKLVKEGKLKTVIDSKHSLSKA  307 (327)
Q Consensus       235 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~g~l~~~~~~~~~~~~~  307 (327)
                      ++++++++|+++.+|...+....+....+..+++++.+...   ...++    .++++++++++|++++.++++|+++++
T Consensus       233 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~  312 (334)
T 3qwb_A          233 SLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDY  312 (334)
T ss_dssp             HHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGGH
T ss_pred             HHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCceeeEEcHHHH
Confidence            99999999999999975443223344455566666654321   12333    357899999999999988899999999


Q ss_pred             HHHHHHHhcCCCCccEEEeC
Q 020314          308 EDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       308 ~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++||+.+.+++..||+|+++
T Consensus       313 ~~A~~~~~~~~~~gKvvi~~  332 (334)
T 3qwb_A          313 RTAAADIESRKTVGKLVLEI  332 (334)
T ss_dssp             HHHHHHHHTTCCCBEEEEEC
T ss_pred             HHHHHHHHhCCCceEEEEec
Confidence            99999999999999999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=2.4e-56  Score=398.37  Aligned_cols=313  Identities=25%  Similarity=0.353  Sum_probs=274.8

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .|.+|||+++.+++  ++.+++++.+.|+|.++||+|||.++|||++|++++.|.++.  ...+|.++|||++|+|+++|
T Consensus        24 m~~~mkA~~~~~~~--~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~GhE~~G~V~~vG   99 (363)
T 3uog_A           24 MSKWMQEWSTETVA--PHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL--DLAFPFVPASDMSGVVEAVG   99 (363)
T ss_dssp             CCSEEEEEEBSCTT--TTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTC--CCCSSBCCCCEEEEEEEEEC
T ss_pred             CchhhEEEEEccCC--CCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCcCcccceEEEEEEEC
Confidence            57789999999873  466999999999999999999999999999999999997642  23689999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           83 SEVKNFKVGDKVVAVL------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      +++++|++||||++.+                        .+|+|+||++++++.++++|+++++++||.+++++.|||+
T Consensus       100 ~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  179 (363)
T 3uog_A          100 KSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWF  179 (363)
T ss_dssp             TTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHH
T ss_pred             CCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHH
Confidence            9999999999999862                        3599999999999999999999999999999999999999


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccCC
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKSP  215 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~~  215 (327)
                      ++.+..++     ++|++|||+| +|++|++++|+|+..|++|++++++ +++++++++|++.++|.+..+  ..+.+.+
T Consensus       180 al~~~~~~-----~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~  253 (363)
T 3uog_A          180 ALVEKGHL-----RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALT  253 (363)
T ss_dssp             HHTTTTCC-----CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH
T ss_pred             HHHHhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHh
Confidence            99778888     8999999999 8999999999999999999999854 788999999999999954344  2344556


Q ss_pred             CCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          216 SGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       216 ~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      .++++|++|||+|++.+..++++++++|+++.+|........+....+..+++++.++ .....++++++++++++|+++
T Consensus       254 ~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~-~~~~~~~~~~~~~l~~~g~l~  332 (363)
T 3uog_A          254 GDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGI-SVGHRRALEDLVGAVDRLGLK  332 (363)
T ss_dssp             TTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEEC-CCCCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEE-ecCCHHHHHHHHHHHHcCCCc
Confidence            6778999999999888999999999999999999765433344445566778888773 345678999999999999999


Q ss_pred             EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          296 TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       296 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++++|+++++++||+.+.+++ .||+|+++
T Consensus       333 ~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          333 PVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             CCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             cceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            99999999999999999999999 89999975

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.6e-55  Score=389.84  Aligned_cols=314  Identities=25%  Similarity=0.354  Sum_probs=261.1

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      +|+|||++++++++ ++.+++++.+.|+|.++||+|||.++|||++|++++.|.++.  +..+|.++|||++|+|+++|+
T Consensus         1 sm~mka~~~~~~g~-~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~   77 (349)
T 4a27_A            1 SMEMRAVVLAGFGG-LNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDN--PPKTPLVPGFECSGIVEALGD   77 (349)
T ss_dssp             CCCEEEEEECSSSS-GGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSEEEEEEEEECT
T ss_pred             CceeEEEEEccCCC-cceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCC--CCCCCccccceeEEEEEEeCC
Confidence            47899999999986 677999999999999999999999999999999999998642  236799999999999999999


Q ss_pred             CCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCC
Q 020314           84 EVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS  163 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~  163 (327)
                      ++++|++||||+++..+|+|+||++++++.++++|+++++++||+++++++|||+++.+..++     ++|++|||+|++
T Consensus        78 ~v~~~~~GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~-----~~g~~VlV~Ga~  152 (349)
T 4a27_A           78 SVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANL-----REGMSVLVHSAG  152 (349)
T ss_dssp             TCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCC-----CTTCEEEESSTT
T ss_pred             CCCCCCCCCEEEEecCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-----CCCCEEEEEcCC
Confidence            999999999999988899999999999999999999999999999999999999999888888     899999999988


Q ss_pred             ChHHHHHHHHHHhCC-CeEEEEecCCcHHHHHhcCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314          164 GAVGLYAVQLAKLGN-THVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT  241 (327)
Q Consensus       164 g~~G~~~~~la~~~g-~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~  241 (327)
                      |++|++++|+|++.| ++|++++++++++.++ +|++.+++ .+.+ .+.++...++++|++|||+|++.+..+++++++
T Consensus       153 G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~l~~  230 (349)
T 4a27_A          153 GGVGQAVAQLCSTVPNVTVFGTASTFKHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKP  230 (349)
T ss_dssp             SHHHHHHHHHHTTSTTCEEEEEECGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEECC-------CTTEEE
T ss_pred             cHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceEEEECCCchhHHHHHHHhhc
Confidence            999999999999986 5899988778888888 99999998 4444 222222345689999999999888999999999


Q ss_pred             CcEEEeecCCchhH----------------HHHhhhhccccceeeEEEEeC-----CC-----HHHHHHHHHHHHCCcee
Q 020314          242 TGKVIDFNPSPRVL----------------LTFAWKKLTFSKKQLVPFSVS-----PK-----GENLDFLVKLVKEGKLK  295 (327)
Q Consensus       242 ~G~~v~~g~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~g~l~  295 (327)
                      +|+++.+|......                ..+....+..++..+.++...     ..     ++.++++++++++|+++
T Consensus       231 ~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  310 (349)
T 4a27_A          231 LGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIK  310 (349)
T ss_dssp             EEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCcc
Confidence            99999998642110                112233344556666664321     11     67889999999999999


Q ss_pred             EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          296 TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       296 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++++|+++++++|++.+.+++..||+|+++
T Consensus       311 ~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~  342 (349)
T 4a27_A          311 PVVDSLWALEEVKEAMQRIHDRGNIGKLILDV  342 (349)
T ss_dssp             CCEEEEECGGGHHHHHHHHHTTCCSSEEEEET
T ss_pred             ccccceECHHHHHHHHHHHHhCCCCceEEEec
Confidence            99999999999999999999999999999975

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=8.8e-55  Score=382.91  Aligned_cols=312  Identities=27%  Similarity=0.309  Sum_probs=267.7

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||++++++|+ ++.+++++.+.|+|.++||+|||.++|||++|++++.|.++.   ..+|.++|||++|+|+++|++++
T Consensus         2 MkA~~~~~~g~-~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~vG~~v~   77 (325)
T 3jyn_A            2 AKRIQFSTVGG-PEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA---PFLPSGLGAEGAGVVEAVGDEVT   77 (325)
T ss_dssp             EEEEEBSSCSS-GGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---SSSSBCCCCCEEEEEEEECTTCC
T ss_pred             cEEEEEecCCC-cceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC---CCCCCCCCceeEEEEEEECCCCC
Confidence            89999999987 688999999999999999999999999999999999998752   26789999999999999999999


Q ss_pred             CCCCCCEEEEEc-cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCCh
Q 020314           87 NFKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGA  165 (327)
Q Consensus        87 ~~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~  165 (327)
                      +|++||||++.. .+|+|+||++++++.++++|+++++++||++++.++|+|+++.+..++     ++|++|||+||+|+
T Consensus        78 ~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~-----~~g~~VlV~Ga~g~  152 (325)
T 3jyn_A           78 RFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQV-----KPGEIILFHAAAGG  152 (325)
T ss_dssp             SCCTTCEEEESSSSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCC-----CTTCEEEESSTTSH
T ss_pred             CCCCCCEEEEecCCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCC-----CCCCEEEEEcCCcH
Confidence            999999999854 579999999999999999999999999999999999999999888888     89999999999999


Q ss_pred             HHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCC
Q 020314          166 VGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTT  242 (327)
Q Consensus       166 ~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~  242 (327)
                      +|++++|+|+..|++|+++++ ++++++++++|++.++|+++.+  ..+.+.+.++++|++|||+|++.+..++++++++
T Consensus       153 iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~~  232 (325)
T 3jyn_A          153 VGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPR  232 (325)
T ss_dssp             HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTTEEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhcCC
Confidence            999999999999999999985 4788899999999999988766  2345556777999999999998899999999999


Q ss_pred             cEEEeecCCchhHHHHhhhhcccc-ceeeEEEE---eCCC----HHHHHHHHHHHHCCceeEecceeeccccHHHHHHHH
Q 020314          243 GKVIDFNPSPRVLLTFAWKKLTFS-KKQLVPFS---VSPK----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKS  314 (327)
Q Consensus       243 G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~  314 (327)
                      |+++.+|...+....+....+..+ .+.+.+..   ....    .+.++++++++++|++++.+.++|+++++++||+.+
T Consensus       233 G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~  312 (325)
T 3jyn_A          233 GLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGIEQYALKDAAKAQIEL  312 (325)
T ss_dssp             EEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHHH
T ss_pred             CEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCccccEEcHHHHHHHHHHH
Confidence            999999865432212222222333 22222211   1112    234568999999999999889999999999999999


Q ss_pred             hcCCCCccEEEeC
Q 020314          315 ISGRATGKIIVEP  327 (327)
Q Consensus       315 ~~~~~~gkvvv~~  327 (327)
                      .+++..||+|+.|
T Consensus       313 ~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          313 SARRTTGSTILIP  325 (325)
T ss_dssp             HTTCCCSCEEEEC
T ss_pred             HcCCCCceEEEeC
Confidence            9999999999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=8.5e-55  Score=385.48  Aligned_cols=312  Identities=25%  Similarity=0.378  Sum_probs=264.2

Q ss_pred             CC-CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEE
Q 020314            1 MA-GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVI   79 (327)
Q Consensus         1 m~-~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~   79 (327)
                      |+ .|.+|||+++.+++++   +++++.+.|+|.++||+|||.++|||++|++++.|..+.. ...+|.++|||++|+|+
T Consensus         1 Ms~~~~~mka~~~~~~~~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~P~v~G~E~~G~V~   76 (343)
T 3gaz_A            1 MSLTTPTMIAAVVEEANGP---FVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHA-QQPLPAILGMDLAGTVV   76 (343)
T ss_dssp             -----CEEEEEEECSTTCC---EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGG-CCCSSBCCCCEEEEEEE
T ss_pred             CCCCchhheEEEEecCCCc---eEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCC-CCCCCcccCcceEEEEE
Confidence            64 6889999999998875   9999999999999999999999999999999999875321 23689999999999999


Q ss_pred             ecCCCCCCCCCCCEEEEEc-----cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCC
Q 020314           80 GLGSEVKNFKVGDKVVAVL-----SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQ  154 (327)
Q Consensus        80 ~vG~~~~~~~~Gd~V~~~~-----~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~  154 (327)
                      ++|+++++|++||||++..     .+|+|+||++++++.++++|+++++++||.++++++|||+++.+..++     ++|
T Consensus        77 ~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~-----~~g  151 (343)
T 3gaz_A           77 AVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQV-----QDG  151 (343)
T ss_dssp             EECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCC-----CTT
T ss_pred             EECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCC-----CCC
Confidence            9999999999999999864     479999999999999999999999999999999999999999778888     899


Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcc
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPW  232 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~  232 (327)
                      ++|||+||+|++|++++|+|+..|++|+++.+++++++++++|++. ++ ...+  ..+.+.+.++++|++|||+|++.+
T Consensus       152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~~~  229 (343)
T 3gaz_A          152 QTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGPVL  229 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTHHH
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcHHH
Confidence            9999999999999999999999999999996667889999999998 77 4433  234445667789999999998889


Q ss_pred             cccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC------C----CHHHHHHHHHHHHCCceeEecc-ee
Q 020314          233 STFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS------P----KGENLDFLVKLVKEGKLKTVID-SK  301 (327)
Q Consensus       233 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~g~l~~~~~-~~  301 (327)
                      ..++++++++|+++.+|....    .....+.++++++.+.+..      .    ..+.++++++++++|++++.++ ++
T Consensus       230 ~~~~~~l~~~G~iv~~g~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  305 (343)
T 3gaz_A          230 DASFSAVKRFGHVVSCLGWGT----HKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRT  305 (343)
T ss_dssp             HHHHHHEEEEEEEEESCCCSC----CCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCC
T ss_pred             HHHHHHHhcCCeEEEEcccCc----cccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcE
Confidence            999999999999999986542    1223344566666653221      0    1367899999999999999888 79


Q ss_pred             eccccHHHHHHHHhcCCC----CccEEEeC
Q 020314          302 HSLSKAEDAWAKSISGRA----TGKIIVEP  327 (327)
Q Consensus       302 ~~~~~~~~a~~~~~~~~~----~gkvvv~~  327 (327)
                      |+++++++|++.+.+++.    .||+|++.
T Consensus       306 ~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~  335 (343)
T 3gaz_A          306 FSIAEIGSAYDAVLGRNDVPRQRGKIAITV  335 (343)
T ss_dssp             EETTCHHHHHHHHHTCTTCCCCSSBCEEEC
T ss_pred             ecHHHHHHHHHHHHcCCCcccccceEEEEe
Confidence            999999999999998876    57888763

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1e-54  Score=380.93  Aligned_cols=300  Identities=21%  Similarity=0.308  Sum_probs=249.6

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      ++|||+++++   +++.+++++.+.|+|.++||+|||.++|||++|++++.|.++.   ..+|.++|||++|+|+++|++
T Consensus         3 ~tMka~~~~~---~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~   76 (315)
T 3goh_A            3 EQHQVWAYQT---KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPIN---WSNGHVPGVDGAGVIVKVGAK   76 (315)
T ss_dssp             CEEEEEEEET---TTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTC---CCTTCCCCSEEEEEEEEECTT
T ss_pred             cceEEEEEeC---CCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCc---CCCCCEeeeeeEEEEEEeCCC
Confidence            5799999986   2456999999999999999999999999999999999998752   368999999999999999999


Q ss_pred             CCCCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314           85 VKNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      +++|++||||++..   .+|+|+||++++++.++++|+++++++||+++++++|||+++ +..++     ++|++|||+|
T Consensus        77 v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~-----~~g~~VlV~G  150 (315)
T 3goh_A           77 VDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPL-----TKQREVLIVG  150 (315)
T ss_dssp             SCGGGTTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCC-----CSCCEEEEEC
T ss_pred             CCCCCCCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCC-----CCCCEEEEEC
Confidence            99999999999975   379999999999999999999999999999999999999999 88888     8999999999


Q ss_pred             CCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314          162 ASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT  241 (327)
Q Consensus       162 ~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~  241 (327)
                      + |++|++++|+|++.|++|+++++++|+++++++|++.+++  +  .+.+    ++++|++|||+|++.+..+++++++
T Consensus       151 a-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~--d--~~~v----~~g~Dvv~d~~g~~~~~~~~~~l~~  221 (315)
T 3goh_A          151 F-GAVNNLLTQMLNNAGYVVDLVSASLSQALAAKRGVRHLYR--E--PSQV----TQKYFAIFDAVNSQNAAALVPSLKA  221 (315)
T ss_dssp             C-SHHHHHHHHHHHHHTCEEEEECSSCCHHHHHHHTEEEEES--S--GGGC----CSCEEEEECC-------TTGGGEEE
T ss_pred             C-CHHHHHHHHHHHHcCCEEEEEEChhhHHHHHHcCCCEEEc--C--HHHh----CCCccEEEECCCchhHHHHHHHhcC
Confidence            8 9999999999999999999999778999999999999884  2  2222    6789999999999888899999999


Q ss_pred             CcEEEeecCCchh-HHHHhhhhccccceeeEEEEeCCCH-------HHHHHHHHHHHCCceeEecceeeccccHHHHHHH
Q 020314          242 TGKVIDFNPSPRV-LLTFAWKKLTFSKKQLVPFSVSPKG-------ENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAK  313 (327)
Q Consensus       242 ~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~  313 (327)
                      +|+++.+|..... ......+.+.++.+++.++.....+       +.++++++++++|++++.++++|+++++++||+.
T Consensus       222 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~  301 (315)
T 3goh_A          222 NGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALDH  301 (315)
T ss_dssp             EEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHHHHH
T ss_pred             CCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEecHHHHHHHHHH
Confidence            9999999764322 2222334455555555543221222       3578899999999999999999999999999999


Q ss_pred             HhcCCCCccEEEeC
Q 020314          314 SISGRATGKIIVEP  327 (327)
Q Consensus       314 ~~~~~~~gkvvv~~  327 (327)
                      +.  +..||+|+++
T Consensus       302 ~~--~~~gKvvi~~  313 (315)
T 3goh_A          302 SE--QTKLKTVLTL  313 (315)
T ss_dssp             HH--HHCCCEEEES
T ss_pred             HH--hcCCcEEEEe
Confidence            98  6779999875

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=2.1e-55  Score=389.23  Aligned_cols=314  Identities=20%  Similarity=0.278  Sum_probs=266.9

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      ++|||++++++|++.+.+++++.+.|+|.++||+|||.++|||++|++.+.|.++.  ...+|.++|||++|+|+++|++
T Consensus         3 ~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~vG~~   80 (340)
T 3gms_A            3 LHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH--RIPLPNIPGYEGVGIVENVGAF   80 (340)
T ss_dssp             CEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTT--TSCSSBCCCSCCEEEEEEECTT
T ss_pred             cccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCC--CCCCCCcCCcceEEEEEEeCCC
Confidence            68999999999985478999999999999999999999999999999999998653  2368999999999999999999


Q ss_pred             CCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCC
Q 020314           85 VKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASG  164 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g  164 (327)
                      ++++++||||+++..+|+|+||++++++.++++|+++++++||+++..++|||+++.+.+++     ++|++|||+|++|
T Consensus        81 v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~-----~~g~~VlV~Ga~g  155 (340)
T 3gms_A           81 VSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNL-----QRNDVLLVNACGS  155 (340)
T ss_dssp             SCGGGTTCEEEECSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCC-----CTTCEEEESSTTS
T ss_pred             CCCCCCCCEEEecCCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhccc-----CCCCEEEEeCCcc
Confidence            99999999999977889999999999999999999999999999999999999999888888     8999999999888


Q ss_pred             hHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314          165 AVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT  241 (327)
Q Consensus       165 ~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~  241 (327)
                      ++|++++|+|+..|++|+++++ +++++.++++|++.++|+.+.+  ..+.+.++++++|++|||+|++....+++++++
T Consensus       156 ~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~  235 (340)
T 3gms_A          156 AIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRP  235 (340)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHTEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCChhHHHHHHHhcC
Confidence            9999999999999999999984 5789999999999999987766  234555677799999999998877777799999


Q ss_pred             CcEEEeecCCchhHHHHhhhhcc-ccceeeEEEEe---------CCCHHHHHHHHHHHHCCceeE-ecceeeccccHHHH
Q 020314          242 TGKVIDFNPSPRVLLTFAWKKLT-FSKKQLVPFSV---------SPKGENLDFLVKLVKEGKLKT-VIDSKHSLSKAEDA  310 (327)
Q Consensus       242 ~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~l~~-~~~~~~~~~~~~~a  310 (327)
                      +|+++.+|.........  ..+. ...+.+..+..         ....+.++++++++++|++++ .+.++|+++++++|
T Consensus       236 ~G~iv~~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l~~~~~A  313 (340)
T 3gms_A          236 NGHFLTIGLLSGIQVNW--AEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELADVKAA  313 (340)
T ss_dssp             EEEEEECCCTTSCCCCH--HHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEGGGHHHH
T ss_pred             CCEEEEEeecCCCCCCH--HHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeHHHHHHH
Confidence            99999998654321111  1111 12222222110         112467899999999999986 57889999999999


Q ss_pred             HHHHhcCCC-CccEEEeC
Q 020314          311 WAKSISGRA-TGKIIVEP  327 (327)
Q Consensus       311 ~~~~~~~~~-~gkvvv~~  327 (327)
                      |+.+.+++. .||+++.+
T Consensus       314 ~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          314 VDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             HHHHHCTTCCSSEEEEEC
T ss_pred             HHHHHhcCCCCCeEEEEE
Confidence            999999985 59999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=8e-54  Score=381.84  Aligned_cols=307  Identities=19%  Similarity=0.294  Sum_probs=265.4

Q ss_pred             CCCccceEEEEEeccCCCccceEEee--ccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEE
Q 020314            1 MAGKAVMHAVQYDSYGGGVAGLKHVE--VPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEV   78 (327)
Q Consensus         1 m~~~~~~~a~~~~~~g~~~~~l~~~~--~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V   78 (327)
                      |+.|++|||+++++++.+   +++++  .+.|+|.++||+|||.++|||++|++.+.|.++.   ..+|.++|||++|+|
T Consensus         1 M~~p~~mka~~~~~~~~~---l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~GhE~~G~V   74 (360)
T 1piw_A            1 MSYPEKFEGIAIQSHEDW---KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN---MKMPLVVGHEIVGKV   74 (360)
T ss_dssp             CCTTTCEEEEEECCSSST---TSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC---CCSSEECCCCEEEEE
T ss_pred             CCCChheEEEEEecCCCC---eeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCC---CCCCcccCcCceEEE
Confidence            889999999999988743   78888  8999999999999999999999999999987542   357999999999999


Q ss_pred             EecCCCCC-CCCCCCEEEEE-----------------------------------ccCcccceeEeecCCceeeCCCCCC
Q 020314           79 IGLGSEVK-NFKVGDKVVAV-----------------------------------LSGGGLAEFAVAKESLTVARPQEVS  122 (327)
Q Consensus        79 ~~vG~~~~-~~~~Gd~V~~~-----------------------------------~~~g~~a~~~~~~~~~~~~ip~~~~  122 (327)
                      +++|++++ +|++||||+..                                   ..+|+|+||++++++.++++|++++
T Consensus        75 ~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~  154 (360)
T 1piw_A           75 VKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIP  154 (360)
T ss_dssp             EEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSC
T ss_pred             EEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCC
Confidence            99999999 99999999531                                   1358999999999999999999999


Q ss_pred             hhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEE
Q 020314          123 AAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEV  201 (327)
Q Consensus       123 ~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v  201 (327)
                      +++||.+++++.|||+++.+ .++     ++|++|||+|+ |++|++++|+|+++|++|++++ +++++++++++|++.+
T Consensus       155 ~~~aa~l~~~~~ta~~~l~~-~~~-----~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v  227 (360)
T 1piw_A          155 SHLAAPLLCGGLTVYSPLVR-NGC-----GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHY  227 (360)
T ss_dssp             HHHHGGGGTHHHHHHHHHHH-TTC-----STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE
T ss_pred             HHHhhhhhhhHHHHHHHHHH-cCC-----CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEE
Confidence            99999999999999999965 777     89999999997 9999999999999999999998 4578999999999999


Q ss_pred             EeCCCC-Cc-ccccCCCCCcccEEEeCCCC---CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC
Q 020314          202 LDYKTP-DG-AALKSPSGRKYDAVINCVTG---IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS  276 (327)
Q Consensus       202 ~~~~~~-~~-~~~~~~~~~~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (327)
                      +++++. +. +.+.    +++|++||++|+   ..+..++++++++|+++.+|.... ...+....+..+++++.+ +..
T Consensus       228 ~~~~~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g-~~~  301 (360)
T 1piw_A          228 IATLEEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISY-SAL  301 (360)
T ss_dssp             EEGGGTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEE-CCC
T ss_pred             EcCcCchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEE-Eec
Confidence            988765 42 1121    479999999998   568999999999999999987654 112334455667777777 334


Q ss_pred             CCHHHHHHHHHHHHCCceeEecceeecccc--HHHHHHHHhcCCCCccEEEeC
Q 020314          277 PKGENLDFLVKLVKEGKLKTVIDSKHSLSK--AEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       277 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~--~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ...++++++++++++|++++.+ ++|++++  +++||+.+.+++..||+|+++
T Consensus       302 ~~~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~  353 (360)
T 1piw_A          302 GSIKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVG  353 (360)
T ss_dssp             CCHHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred             CCHHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEec
Confidence            4678899999999999998877 8999999  999999999998889999874

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=9.8e-55  Score=385.70  Aligned_cols=310  Identities=23%  Similarity=0.280  Sum_probs=265.0

Q ss_pred             cceEEEEEeccC--CCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            5 AVMHAVQYDSYG--GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         5 ~~~~a~~~~~~g--~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      |+|||++++++|  ++++.+++++.+.|+|.++||+|||.++|||++|++++.|..     ..+|.++|||++|+|+++|
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~-----~~~p~i~G~e~~G~V~~vG   75 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDV-----SKAPRVLGFDAIGVVESVG   75 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSCC-----SSSCBCCCCCEEEEEEEEC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCCC-----CCCCcCcCCccEEEEEEeC
Confidence            579999999988  246789999999999999999999999999999999998873     3678999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCC------C
Q 020314           83 SEVKNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSG------Q  153 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~------~  153 (327)
                      ++++++++||||++..   .+|+|+||++++++.++++|+++++++||.++++++|||+++.+..++     +      +
T Consensus        76 ~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~-----~~~~~~~~  150 (346)
T 3fbg_A           76 NEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGI-----SRNRNENE  150 (346)
T ss_dssp             TTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCC-----CSSHHHHT
T ss_pred             CCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCC-----ccccccCC
Confidence            9999999999999853   479999999999999999999999999999999999999999888888     6      8


Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-  231 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-  231 (327)
                      |++|||+||+|++|++++|+|+..|++|+++++ ++++++++++|++.++++++...+.++...++++|++|||+|++. 
T Consensus       151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~~  230 (346)
T 3fbg_A          151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDMY  230 (346)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHHH
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchHH
Confidence            999999998999999999999999999999996 578899999999999988753323233336678999999999765 


Q ss_pred             ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCC-----------CHHHHHHHHHHHHCCceeEecce
Q 020314          232 WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP-----------KGENLDFLVKLVKEGKLKTVIDS  300 (327)
Q Consensus       232 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~l~~~~~~  300 (327)
                      +..++++++++|+++.++....   .+....+..+++++.+.....           ..+.++++++++++|++++.+.+
T Consensus       231 ~~~~~~~l~~~G~iv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~  307 (346)
T 3fbg_A          231 YDDMIQLVKPRGHIATIVAFEN---DQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTK  307 (346)
T ss_dssp             HHHHHHHEEEEEEEEESSCCSS---CBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred             HHHHHHHhccCCEEEEECCCCC---CCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECCccc
Confidence            7899999999999999875432   122334445556555522110           13668899999999999988887


Q ss_pred             ee---ccccHHHHHHHHhcCCCCccEEEeC
Q 020314          301 KH---SLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       301 ~~---~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +|   +++++++||+.+.+++..||+|+.+
T Consensus       308 ~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          308 VIEGLTTENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             EEESCCHHHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             eecCCCHHHHHHHHHHHhcCCcceEEEEec
Confidence            77   9999999999999999999999974

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.2e-53  Score=379.07  Aligned_cols=300  Identities=17%  Similarity=0.206  Sum_probs=260.6

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      ++|||+++.+++++   +++++.+.|+|.++||+|||.++|||++|++++.|.++.   ..+|.++|||++|+|+++|++
T Consensus         3 m~mka~~~~~~~~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~V~~vG~~   76 (348)
T 3two_A            3 VQSKGFAIFSKDEH---FKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE---GIYPMIPGHEIAGIIKEVGKG   76 (348)
T ss_dssp             EEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC---CCSSBCCCCCEEEEEEEECTT
T ss_pred             eEEEEEEEccCCCC---CeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC---CCCCeecCcceeEEEEEECCC
Confidence            78999999987654   999999999999999999999999999999999998752   367999999999999999999


Q ss_pred             CCCCCCCCEEEEEc-------------------------------------cCcccceeEeecCCceeeCCCCCChhhhc
Q 020314           85 VKNFKVGDKVVAVL-------------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGA  127 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~-------------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa  127 (327)
                      +++|++||||++.+                                     .+|+|+||++++++.++++|+++++++||
T Consensus        77 v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  156 (348)
T 3two_A           77 VKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVA  156 (348)
T ss_dssp             CCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHG
T ss_pred             CCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhh
Confidence            99999999997632                                     12999999999999999999999999999


Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~  206 (327)
                      .+++++.|||+++. ..++     ++|++|||+|+ |++|++++|+|+++|++|++++ +++++++++++|++.++ .+.
T Consensus       157 ~l~~~~~ta~~~l~-~~~~-----~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~  228 (348)
T 3two_A          157 PLLCAGITTYSPLK-FSKV-----TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TDP  228 (348)
T ss_dssp             GGGTHHHHHHHHHH-HTTC-----CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SSG
T ss_pred             hhhhhHHHHHHHHH-hcCC-----CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CCH
Confidence            99999999999995 4577     89999999995 9999999999999999999988 56899999999999988 221


Q ss_pred             CCcccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCc-hhHHHHhhhhcc-ccceeeEEEEeCCCHHHHH
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKLT-FSKKQLVPFSVSPKGENLD  283 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  283 (327)
                         ..+.    .++|++||++|++ .+..++++++++|+++.+|... .....+....+. .+++++.+ +.....++++
T Consensus       229 ---~~~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g-~~~~~~~~~~  300 (348)
T 3two_A          229 ---KQCK----EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYG-SLIGGIKETQ  300 (348)
T ss_dssp             ---GGCC----SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEE-CCSCCHHHHH
T ss_pred             ---HHHh----cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEE-EecCCHHHHH
Confidence               1121    1799999999988 6999999999999999999765 332213334455 77888887 4455778899


Q ss_pred             HHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          284 FLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       284 ~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++++++|++++.+ ++|+++++++||+.+.+++..||+|+++
T Consensus       301 ~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~  343 (348)
T 3two_A          301 EMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDM  343 (348)
T ss_dssp             HHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEG
T ss_pred             HHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEec
Confidence            999999999998865 7999999999999999999999999974

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=2.8e-54  Score=384.35  Aligned_cols=318  Identities=20%  Similarity=0.225  Sum_probs=264.0

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .|.+|||+++.++|++.+.+++++.+.|+|.++||+|||.++|||++|++.+.|.++.  ...+|.++|||++|+|+++|
T Consensus        23 m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~~vG  100 (357)
T 1zsy_A           23 MPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL--LPELPAVGGNEGVAQVVAVG  100 (357)
T ss_dssp             CCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSEECCSCCEEEEEEEC
T ss_pred             CchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCC--CCCCCccccceEEEEEEEeC
Confidence            5778999999998874455889999999999999999999999999999999987642  12578999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc-cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314           83 SEVKNFKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      +++++|++||||++.. .+|+|+||++++++.++++|+++++++||+++++++|||+++.+..++     ++|++|||+|
T Consensus       101 ~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~-----~~g~~VlV~G  175 (357)
T 1zsy_A          101 SNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQL-----QPGDSVIQNA  175 (357)
T ss_dssp             TTCCSCCTTCEEEESSSCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCC-----CTTCEEEESS
T ss_pred             CCCCCCCCCCEEEEcCCCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhcc-----CCCCEEEEeC
Confidence            9999999999999864 469999999999999999999999999999999999999999777888     8999999999


Q ss_pred             CCChHHHHHHHHHHhCCCeEEEEecC-C----cHHHHHhcCCCEEEeCCCCC-cccccCCCCC-cccEEEeCCCCCcccc
Q 020314          162 ASGAVGLYAVQLAKLGNTHVTATCGA-R----NIELVKSLGADEVLDYKTPD-GAALKSPSGR-KYDAVINCVTGIPWST  234 (327)
Q Consensus       162 ~~g~~G~~~~~la~~~g~~v~~~~~~-~----~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~-~~d~v~d~~g~~~~~~  234 (327)
                      ++|++|++++|+|+.+|++++++++. +    ++++++++|++.++++++.+ ..+.+.+.+. ++|++|||+|++....
T Consensus       176 a~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g~~~~~~  255 (357)
T 1zsy_A          176 SNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTE  255 (357)
T ss_dssp             TTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEESSCHHHHHH
T ss_pred             CcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEECCCcHHHHH
Confidence            98999999999999999998888743 2    35788999999999875321 2223333332 5999999999877677


Q ss_pred             cccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC-----CC----HHHHHHHHHHHHCCceeEecceeeccc
Q 020314          235 FEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS-----PK----GENLDFLVKLVKEGKLKTVIDSKHSLS  305 (327)
Q Consensus       235 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~  305 (327)
                      ++++++++|+++.+|........+....+.++++++.++...     ..    .+.++++++++++|++++.+.++|+++
T Consensus       256 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~  335 (357)
T 1zsy_A          256 LLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQ  335 (357)
T ss_dssp             HHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGG
T ss_pred             HHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEEcHH
Confidence            899999999999998543222222333445577777664321     11    346789999999999998777899999


Q ss_pred             cHHHHHHHHhcCCCCccEEEeC
Q 020314          306 KAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       306 ~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++||+.+.+++..||+|+++
T Consensus       336 ~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          336 DYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             GHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHhCCCCCcEEEeC
Confidence            9999999999998889999975

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=2.7e-54  Score=384.79  Aligned_cols=317  Identities=28%  Similarity=0.365  Sum_probs=267.1

Q ss_pred             ccceEEEEEeccC--CCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314            4 KAVMHAVQYDSYG--GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         4 ~~~~~a~~~~~~g--~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      +++|||+++++++  .+++.+++++.+.|+|.++||+|||.++|||++|++++.|.++.   ..+|.++|||++|+|+++
T Consensus        20 m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~v   96 (363)
T 4dvj_A           20 FQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD---GTDWKVIGYDAAGIVSAV   96 (363)
T ss_dssp             CCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC-----CCSBCCCCCEEEEEEEE
T ss_pred             hheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC---CCCCCcccceeEEEEEEe
Confidence            5789999999884  23678999999999999999999999999999999999998642   367899999999999999


Q ss_pred             CCCCCCCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEE
Q 020314           82 GSEVKNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNIL  158 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vl  158 (327)
                      |+++++|++||||++..   .+|+|+||++++++.++++|+++++++||+++++++|||+++.+..+++.....+|++||
T Consensus        97 G~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~Vl  176 (363)
T 4dvj_A           97 GPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAIL  176 (363)
T ss_dssp             CTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEE
T ss_pred             CCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEE
Confidence            99999999999999853   479999999999999999999999999999999999999999888888211112899999


Q ss_pred             EEcCCChHHHHHHHHHHh-CCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-ccccc
Q 020314          159 ITAASGAVGLYAVQLAKL-GNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-PWSTF  235 (327)
Q Consensus       159 V~g~~g~~G~~~~~la~~-~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~  235 (327)
                      |+||+|++|++++|+|++ .|++|++++++ +|+++++++|++.++|+++...+.+....++++|++|||+|++ .+..+
T Consensus       177 V~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~  256 (363)
T 4dvj_A          177 IVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEI  256 (363)
T ss_dssp             EESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHTTCSCCEEEEEECSCHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHhcCCCceEEEECCCchhhHHHH
Confidence            999999999999999998 58899999964 7889999999999999875333333334667999999999976 58999


Q ss_pred             ccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC-------CC----HHHHHHHHHHHHCCceeEecceee--
Q 020314          236 EPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS-------PK----GENLDFLVKLVKEGKLKTVIDSKH--  302 (327)
Q Consensus       236 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~~g~l~~~~~~~~--  302 (327)
                      +++++++|+++.+|....    +....+..+++++.+....       ..    .+.++++++++++|++++.+.+++  
T Consensus       257 ~~~l~~~G~iv~~g~~~~----~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~  332 (363)
T 4dvj_A          257 ADLIAPQGRFCLIDDPSA----FDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTTLTNRLSP  332 (363)
T ss_dssp             HHHSCTTCEEEECSCCSS----CCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCCEEEEECS
T ss_pred             HHHhcCCCEEEEECCCCc----cchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeeccccceecC
Confidence            999999999999975432    2334445566666552211       11    467899999999999998887666  


Q ss_pred             -ccccHHHHHHHHhcCCCCccEEEeC
Q 020314          303 -SLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       303 -~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                       +++++++|++.+.+++..||+|++|
T Consensus       333 ~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          333 INAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             CSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             CCHHHHHHHHHHHHhCCCceEEEEeC
Confidence             9999999999999999999999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.9e-54  Score=382.38  Aligned_cols=310  Identities=22%  Similarity=0.338  Sum_probs=260.5

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCC-CCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPT-PNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~-~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      .|++|||+++++++++   +++++.+.|+ |.++||+|||.++|||++|++.+.|.++......+|.++|||++|+|+++
T Consensus        12 ~~~~mka~~~~~~g~~---l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~v   88 (359)
T 1h2b_A           12 GVERLKAARLHEYNKP---LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEV   88 (359)
T ss_dssp             -----CEEEESSTTSC---CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEE
T ss_pred             ChhhceEEEEecCCCC---cEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEE
Confidence            4778999999988743   8899999999 99999999999999999999999987531001257899999999999999


Q ss_pred             CCCCCCCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhc---ccCc
Q 020314           82 GSEVKNFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGA---GIPC  131 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa---~~~~  131 (327)
                      |+++++|++||||+++.                           .+|+|+||++++++.++++|+++++++||   .+++
T Consensus        89 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~  168 (359)
T 1h2b_A           89 AEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLAD  168 (359)
T ss_dssp             CTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGT
T ss_pred             CCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhh
Confidence            99999999999998753                           36999999999999999999999999999   7888


Q ss_pred             hHHHHHHHHHHh-hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC
Q 020314          132 AGLTAHQALTQS-LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVKSLGADEVLDYKTPD  208 (327)
Q Consensus       132 ~~~ta~~al~~~-~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~  208 (327)
                      ++.|||+++.+. .++     ++|++|||+|+ |++|++++|+|+++ |++|+++++ ++|+++++++|++.++|+++..
T Consensus       169 ~~~ta~~al~~~~~~~-----~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~  242 (359)
T 1h2b_A          169 AGITAYRAVKKAARTL-----YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDP  242 (359)
T ss_dssp             HHHHHHHHHHHHHTTC-----CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCH
T ss_pred             hHHHHHHHHHhhccCC-----CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccchH
Confidence            999999999665 788     89999999997 99999999999999 999999985 4788999999999999987641


Q ss_pred             -cccccCCCCCcccEEEeCCCCC---cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHH
Q 020314          209 -GAALKSPSGRKYDAVINCVTGI---PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF  284 (327)
Q Consensus       209 -~~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (327)
                       ..+.+.+.++++|++||++|++   .+..++++  ++|+++.+|.....  .+....+..+++++.+. .....+++++
T Consensus       243 ~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~--~~~~~~~~~~~~~i~g~-~~~~~~~~~~  317 (359)
T 1h2b_A          243 VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL--RFPTIRVISSEVSFEGS-LVGNYVELHE  317 (359)
T ss_dssp             HHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC--CCCHHHHHHTTCEEEEC-CSCCHHHHHH
T ss_pred             HHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC--CCCHHHHHhCCcEEEEe-cCCCHHHHHH
Confidence             1223345556899999999987   78888888  99999999865432  23333455677777773 3446788999


Q ss_pred             HHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          285 LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       285 ~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++++|++++.+ ++|+++++++|++.+.+++..||+|+++
T Consensus       318 ~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          318 LVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            99999999999888 9999999999999999998889999975

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.1e-55  Score=392.31  Aligned_cols=318  Identities=24%  Similarity=0.266  Sum_probs=264.4

Q ss_pred             CCCccceEEEEEe--ccCCCccceEEeec---------cCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCee
Q 020314            1 MAGKAVMHAVQYD--SYGGGVAGLKHVEV---------PVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFI   69 (327)
Q Consensus         1 m~~~~~~~a~~~~--~~g~~~~~l~~~~~---------~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~   69 (327)
                      |+.|.+|||++++  +++++++.+++++.         +.|+|.++||+|||.++|||++|++++.|.++.  +..+|.+
T Consensus         5 m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~p~v   82 (349)
T 3pi7_A            5 MTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQ--PRVKGRP   82 (349)
T ss_dssp             CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSS--CBCTTSB
T ss_pred             CCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCC--CCCCCCC
Confidence            5678899999999  77545677888888         999999999999999999999999999998642  2368999


Q ss_pred             ecccceEEEEecCCCC-CCCCCCCEEEEEc---cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhC
Q 020314           70 PASDVAGEVIGLGSEV-KNFKVGDKVVAVL---SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLG  145 (327)
Q Consensus        70 ~G~e~~G~V~~vG~~~-~~~~~Gd~V~~~~---~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~  145 (327)
                      +|||++|+|+++|+++ ++|++||||++..   .+|+|+||++++++.++++|+++++++||++++.++|||+++. ..+
T Consensus        83 ~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~-~~~  161 (349)
T 3pi7_A           83 AGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFD-IVK  161 (349)
T ss_dssp             CCSEEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHH-HHH
T ss_pred             ccceEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHHH-HHh
Confidence            9999999999999999 9999999999875   6899999999999999999999999999999999999997764 443


Q ss_pred             CccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccE
Q 020314          146 VKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDA  222 (327)
Q Consensus       146 ~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~  222 (327)
                      .     ..+++|||+||+|++|++++|+|++.|++|+++++ ++++++++++|++.++|+++.+.  .+.+.+.++++|+
T Consensus       162 ~-----~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~  236 (349)
T 3pi7_A          162 Q-----EGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRI  236 (349)
T ss_dssp             H-----HCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCE
T ss_pred             h-----CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcE
Confidence            3     44579999999999999999999999999999994 57899999999999999877652  3444455568999


Q ss_pred             EEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhh-hhccccceeeEEEEeCC--------CHHHHHHHHHHHHCCc
Q 020314          223 VINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAW-KKLTFSKKQLVPFSVSP--------KGENLDFLVKLVKEGK  293 (327)
Q Consensus       223 v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~  293 (327)
                      +|||+|++.+..++++++++|+++.+|........+.. ..+.++++++.++....        ..+.++++++++++|+
T Consensus       237 vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  316 (349)
T 3pi7_A          237 FLDAVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGR  316 (349)
T ss_dssp             EEESSCHHHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSS
T ss_pred             EEECCCChhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCC
Confidence            99999988888999999999999999865433233333 45566777777743211        1467888899999999


Q ss_pred             eeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          294 LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       294 l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++++++|+++++++||+. .+++..||+|++|
T Consensus       317 l~~~i~~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          317 WSTDVTAVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             CCC-CCEEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             cccccceEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence            99999999999999999995 4556779999986

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=4.1e-54  Score=382.69  Aligned_cols=317  Identities=27%  Similarity=0.405  Sum_probs=266.5

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .|.+|||+++.++|. ++.+++++.+.|+|.++||+|||.++|||++|++.+.|.++.  +..+|.++|||++|+|+++|
T Consensus        19 ~~~~Mka~~~~~~g~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~p~v~G~E~~G~V~~vG   95 (354)
T 2j8z_A           19 YFQSMLAVHFDKPGG-PENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGASNILGLEASGHVAELG   95 (354)
T ss_dssp             --CEEEEEEESSCSS-GGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CTTSCSSSCSEEEEEEEEEC
T ss_pred             chhheeEEEEccCCC-ccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEEC
Confidence            578899999998886 567999999999999999999999999999999999997642  12578999999999999999


Q ss_pred             CCC-CCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314           83 SEV-KNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus        83 ~~~-~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      +++ ++|++||||+++..+|+|+||++++++.++++|+++++++||++++++.|||+++.+..++     ++|++|||+|
T Consensus        96 ~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~-----~~g~~vlV~G  170 (354)
T 2j8z_A           96 PGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNV-----QAGDYVLIHA  170 (354)
T ss_dssp             SCC--CCCTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCC-----CTTCEEEESS
T ss_pred             CCcCCCCCCCCEEEEecCCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCC-----CCCCEEEEEC
Confidence            999 9999999999987789999999999999999999999999999999999999999777888     8999999999


Q ss_pred             CCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCcccccccc
Q 020314          162 ASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEPN  238 (327)
Q Consensus       162 ~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~  238 (327)
                      |+|++|++++++++..|++|++++++ ++++.++++|++.++|+++.+.  .+.+.+.++++|++|||+|++.+..++++
T Consensus       171 a~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~  250 (354)
T 2j8z_A          171 GLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNC  250 (354)
T ss_dssp             TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGGGHHHHHHH
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCchHHHHHHHh
Confidence            99999999999999999999999854 6788889999999998876552  33344555689999999999888899999


Q ss_pred             cCCCcEEEeecCCchhHHHHhh-hhccccceeeEEEEeCCCH---------HHHHHHHHHHHCC---ceeEecceeeccc
Q 020314          239 LGTTGKVIDFNPSPRVLLTFAW-KKLTFSKKQLVPFSVSPKG---------ENLDFLVKLVKEG---KLKTVIDSKHSLS  305 (327)
Q Consensus       239 l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~g---~l~~~~~~~~~~~  305 (327)
                      ++++|+++.+|...+....+.. ..+..+++++.+.......         +.++++++++++|   +++++++++|+++
T Consensus       251 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~  330 (354)
T 2j8z_A          251 LALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVT  330 (354)
T ss_dssp             EEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGG
T ss_pred             ccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHH
Confidence            9999999999865432122223 3445667777764332221         1234688899999   8988899999999


Q ss_pred             cHHHHHHHHhcCCCCccEEEeC
Q 020314          306 KAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       306 ~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++||+.+.+++..||+|+++
T Consensus       331 ~~~~A~~~~~~~~~~gKvvv~~  352 (354)
T 2j8z_A          331 EIQEAHKYMEANKNIGKIVLEL  352 (354)
T ss_dssp             GHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHhCCCCceEEEec
Confidence            9999999999988889999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.7e-52  Score=375.28  Aligned_cols=317  Identities=31%  Similarity=0.442  Sum_probs=263.3

Q ss_pred             CccceEEEEEeccCCCccceEE-eeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCC-----------C-CCCCCCe
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKH-VEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRP-----------F-LPRKFPF   68 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~-~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~-----------~-~~~~~p~   68 (327)
                      .+++|||+++.++|. ++.+++ ++.+.|.+ .++||+|||.++|||++|++++.|..+.           . ....+|.
T Consensus        18 ~~~~mka~~~~~~g~-~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~   96 (375)
T 2vn8_A           18 LYFQSMAWVIDKYGK-NEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL   96 (375)
T ss_dssp             CCCCEEEEEBSSCCS-GGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred             cCccceeEEeccCCC-ccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence            577899999999886 577899 89998884 9999999999999999999999885321           0 0123789


Q ss_pred             eecccceEEEEecCCCCCCCCCCCEEEEEcc---CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhC
Q 020314           69 IPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLG  145 (327)
Q Consensus        69 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~---~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~  145 (327)
                      ++|||++|+|+++|+++++|++||||++...   +|+|+||++++++.++++|+++++++||++++++.|||+++.+.++
T Consensus        97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~  176 (375)
T 2vn8_A           97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGG  176 (375)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTC
T ss_pred             ccceeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999998653   7999999999999999999999999999999999999999976777


Q ss_pred             ----CccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcc
Q 020314          146 ----VKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDG-AALKSPSGRKY  220 (327)
Q Consensus       146 ----~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~  220 (327)
                          +     ++|++|||+||+|++|++++|+|+..|++|+++++++++++++++|++.++|+++.+. +.+...  .++
T Consensus       177 ~~~~~-----~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~--~g~  249 (375)
T 2vn8_A          177 LNDKN-----CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSL--KPF  249 (375)
T ss_dssp             CCTTT-----CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTS--CCB
T ss_pred             ccccc-----CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhc--CCC
Confidence                6     8999999999999999999999999999999988778889999999999999876552 222222  479


Q ss_pred             cEEEeCCCCCc--ccccccccCCCcEEEeecCCchhHHH--------------Hhhhhc-cc-cceeeEEEEeCCCHHHH
Q 020314          221 DAVINCVTGIP--WSTFEPNLGTTGKVIDFNPSPRVLLT--------------FAWKKL-TF-SKKQLVPFSVSPKGENL  282 (327)
Q Consensus       221 d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~~~~~~~--------------~~~~~~-~~-~~~~~~~~~~~~~~~~~  282 (327)
                      |++|||+|++.  +..++++++++|+++.+|........              +..+.+ .+ +...+.........+.+
T Consensus       250 D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  329 (375)
T 2vn8_A          250 DFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCL  329 (375)
T ss_dssp             SEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCCCHHHH
T ss_pred             CEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCCCHHHH
Confidence            99999999873  58999999999999999976432110              001111 11 23333322223456788


Q ss_pred             HHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          283 DFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       283 ~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++++++|++++.++++|+++++++|++.+.+++..||+|+++
T Consensus       330 ~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          330 DDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             HHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            999999999999988889999999999999999998889999875

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1e-53  Score=379.22  Aligned_cols=307  Identities=23%  Similarity=0.299  Sum_probs=266.3

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++++++++   +++++.+.|+|.++||+|||.++|||++|++++.|.++.. +..+|.++|||++|+|+++|++++
T Consensus         1 MkA~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~   76 (345)
T 3jv7_A            1 MKAVQYTEIGSE---PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQY-AYGLPLTLGHEGVGTVAELGEGVT   76 (345)
T ss_dssp             CEEEEECSTTSC---CEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTC-CSCSSEECCSEEEEEEEEECTTCC
T ss_pred             CeEEEEcCCCCc---eEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCcc-CCCCCcccCcccEEEEEEECCCCC
Confidence            899999998875   8999999999999999999999999999999999976422 246899999999999999999999


Q ss_pred             CCCCCCEEEEEc--------------------------------cCcccceeEeec-CCceeeCCCCCChhhhcccCchH
Q 020314           87 NFKVGDKVVAVL--------------------------------SGGGLAEFAVAK-ESLTVARPQEVSAAEGAGIPCAG  133 (327)
Q Consensus        87 ~~~~Gd~V~~~~--------------------------------~~g~~a~~~~~~-~~~~~~ip~~~~~~~aa~~~~~~  133 (327)
                      ++++||||++.+                                .+|+|+||++++ ++.++++|+ +++++||.+++++
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~  155 (345)
T 3jv7_A           77 GFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAG  155 (345)
T ss_dssp             SCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTT
T ss_pred             CCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhH
Confidence            999999998742                                379999999999 999999999 9999999999999


Q ss_pred             HHHHHHHHH-hhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC-c
Q 020314          134 LTAHQALTQ-SLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVKSLGADEVLDYKTPD-G  209 (327)
Q Consensus       134 ~ta~~al~~-~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~-~  209 (327)
                      .|||+++.+ ..++     ++|++|||+|+ |++|++++|+|++. |++|+++++ ++|+++++++|++.++++++.. .
T Consensus       156 ~ta~~~l~~~~~~~-----~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~  229 (345)
T 3jv7_A          156 LTPYHAISRVLPLL-----GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAAD  229 (345)
T ss_dssp             HHHHHHHHTTGGGC-----CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHH
T ss_pred             HHHHHHHHHhccCC-----CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHH
Confidence            999999976 4477     89999999995 99999999999988 679999974 5789999999999999987632 2


Q ss_pred             ccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHH
Q 020314          210 AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKL  288 (327)
Q Consensus       210 ~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (327)
                      .+.+.++++++|++||++|++ .+..++++++++|+++.+|........+.. .+..+++++.+ +.....+++++++++
T Consensus       230 ~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g-~~~~~~~~~~~~~~l  307 (345)
T 3jv7_A          230 AIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVT-PYWGTRSELMEVVAL  307 (345)
T ss_dssp             HHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEEC-CCSCCHHHHHHHHHH
T ss_pred             HHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEE-EecCCHHHHHHHHHH
Confidence            344556667899999999987 699999999999999999976542223333 55667777776 445567899999999


Q ss_pred             HHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          289 VKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       289 ~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++|++++ +.++|+++++++||+.+.+++..||+|+.|
T Consensus       308 ~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          308 ARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             HHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             HHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            99999987 458999999999999999999999999975

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=3.8e-53  Score=376.36  Aligned_cols=305  Identities=23%  Similarity=0.318  Sum_probs=265.7

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++...+  +..+++++.++|+|+||||||||.++|||++|+++++|.++    ..+|.++|||++|+|+++|++++
T Consensus         1 MKA~v~~~~~--~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~----~~~p~i~GhE~aG~V~~vG~~V~   74 (348)
T 4eez_A            1 MKAAVVRHNP--DGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG----NKAGTVLGHEGIGIVKEIGADVS   74 (348)
T ss_dssp             CEEEEECSSC--CSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC----CCTTCBCCSEEEEEEEEECTTCC
T ss_pred             CeEEEEEcCC--CCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC----CCCCcccceeEEEEEEEECceee
Confidence            8999997543  34589999999999999999999999999999999999874    46899999999999999999999


Q ss_pred             CCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           87 NFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        87 ~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      ++++||||+..+                            .+|+|+||+.++++.++++|+++++++|+++++++.|+|+
T Consensus        75 ~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  154 (348)
T 4eez_A           75 SLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYK  154 (348)
T ss_dssp             SCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHH
T ss_pred             ecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEe
Confidence            999999997643                            3599999999999999999999999999999999999999


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--cccccC
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALKS  214 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~~  214 (327)
                      ++ +..++     ++|++|||+| +|++|.+++++++.. |++|++++++ +|+++++++|++.++|+++.+  ..+.+.
T Consensus       155 ~l-~~~~~-----~~g~~VlV~G-aG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~  227 (348)
T 4eez_A          155 AI-KVSGV-----KPGDWQVIFG-AGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKI  227 (348)
T ss_dssp             HH-HHHTC-----CTTCEEEEEC-CSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHH
T ss_pred             ee-cccCC-----CCCCEEEEEc-CCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhh
Confidence            99 56777     8999999999 699999999999865 6799999854 788999999999999998877  345667


Q ss_pred             CCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCc
Q 020314          215 PSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  293 (327)
                      +++.++|.+++++++.. +..++++++++|+++.+|..... ..+....+.++++++.+ +....+.+++++++++++|+
T Consensus       228 t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g-s~~~~~~~~~~~~~l~~~g~  305 (348)
T 4eez_A          228 TGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTE-MTLSVPTVVFDGVEVAG-SLVGTRLDLAEAFQFGAEGK  305 (348)
T ss_dssp             TTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCE-EEECHHHHHHSCCEEEE-CCSCCHHHHHHHHHHHHTTS
T ss_pred             cCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCC-CccCHHHHHhCCeEEEE-EecCCHHHHHHHHHHHHcCC
Confidence            78889999999998765 88999999999999999865432 23344556778888887 45567889999999999999


Q ss_pred             eeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          294 LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       294 l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++.+ ++|+|+++++||+.+++++..||+||++
T Consensus       306 i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          306 VKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             CCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             CEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEc
Confidence            98755 7899999999999999999999999975

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.8e-53  Score=377.25  Aligned_cols=312  Identities=28%  Similarity=0.419  Sum_probs=267.9

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||++++++++ ++.+++++.+.|+|.++||+|||.++|||++|++++.|.++.  ...+|.++|||++|+|+++|++++
T Consensus         1 Mka~~~~~~g~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~vG~~v~   77 (343)
T 2eih_A            1 MRAVVMRARGG-PEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASP--KLPLPHVLGADGSGVVDAVGPGVE   77 (343)
T ss_dssp             CEEEEECSSSS-GGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSST--TCCSSEECCSEEEEEEEEECSSCC
T ss_pred             CeEEEEecCCC-CceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCC--CCCCCcccccceEEEEEEECCCCC
Confidence            79999999886 567999999999999999999999999999999999987642  125789999999999999999999


Q ss_pred             CCCCCCEEEE---------------------------EccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVA---------------------------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~---------------------------~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      ++++||||+.                           ...+|+|+||++++++.++++|+++++++||+++.++.|||++
T Consensus        78 ~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~a  157 (343)
T 2eih_A           78 GFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM  157 (343)
T ss_dssp             SCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHH
T ss_pred             CCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHH
Confidence            9999999993                           2235999999999999999999999999999999999999999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc--ccccCCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG--AALKSPS  216 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~  216 (327)
                      +.+..++     +++++|||+|++|++|++++|+++..|++|++++++ ++++.++++|++.++|+++.+.  .+.+.+.
T Consensus       158 l~~~~~~-----~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~  232 (343)
T 2eih_A          158 VVDKLGV-----RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTG  232 (343)
T ss_dssp             HTTTSCC-----CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTT
T ss_pred             HHHhcCC-----CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhC
Confidence            9666788     899999999999999999999999999999999864 6788888999999988876552  2333344


Q ss_pred             CCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE
Q 020314          217 GRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT  296 (327)
Q Consensus       217 ~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~  296 (327)
                      +.++|++||++|++.+..++++++++|+++.+|........+....+..+++++.+. .....++++++++++++|++++
T Consensus       233 ~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~l~~~g~l~~  311 (343)
T 2eih_A          233 GKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGS-TMASKSRLFPILRFVEEGKLKP  311 (343)
T ss_dssp             TTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEEC-CSCCGGGHHHHHHHHHHTSSCC
T ss_pred             CCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEe-cCccHHHHHHHHHHHHcCCCCC
Confidence            568999999999777899999999999999998654322223334455677777773 3445788999999999999999


Q ss_pred             ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          297 VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       297 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .++++|+++++++||+.+.+++..||+|+++
T Consensus       312 ~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          312 VVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             CEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             ceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            8889999999999999999988889999875

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=3.9e-53  Score=374.82  Aligned_cols=306  Identities=24%  Similarity=0.344  Sum_probs=264.1

Q ss_pred             ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      +|||+++++++++   +++++.+.|+|.++||+|||.++|||++|++++.|.++.  ...+|.++|||++|+|+++|+++
T Consensus         2 ~MkA~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~G~E~~G~V~~vG~~v   76 (340)
T 3s2e_A            2 MMKAAVVRAFGAP---LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPV--KPTLPFIPGHEGVGYVSAVGSGV   76 (340)
T ss_dssp             EEEEEEBCSTTSC---CEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSEEEEEEEEECSSC
T ss_pred             ceEEEEEecCCCC---CEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCC--CCCCCcccCCcceEEEEEECCCC
Confidence            5999999988765   999999999999999999999999999999999998642  13689999999999999999999


Q ss_pred             CCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHH
Q 020314           86 KNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAH  137 (327)
Q Consensus        86 ~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  137 (327)
                      ++|++||||+...                            .+|+|+||++++++.++++|+++++++||.+++++.|||
T Consensus        77 ~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~  156 (340)
T 3s2e_A           77 SRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVY  156 (340)
T ss_dssp             CSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHH
T ss_pred             CcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHH
Confidence            9999999995321                            469999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCc-ccccCC
Q 020314          138 QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDG-AALKSP  215 (327)
Q Consensus       138 ~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~-~~~~~~  215 (327)
                      +++ +..++     ++|++|||+| +|++|++++|+|+++|++|+++++ ++++++++++|++.++|+++.+. +.+..+
T Consensus       157 ~~l-~~~~~-----~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~  229 (340)
T 3s2e_A          157 KGL-KVTDT-----RPGQWVVISG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKE  229 (340)
T ss_dssp             HHH-HTTTC-----CTTSEEEEEC-CSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred             HHH-HHcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHh
Confidence            999 66677     8999999999 599999999999999999999985 57889999999999999887662 222223


Q ss_pred             CCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314          216 SGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL  294 (327)
Q Consensus       216 ~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  294 (327)
                      .+ ++|++||++|+. .++.++++++++|+++.+|...+. ..+....+.++++++.+ +....+++++++++++++|++
T Consensus       230 ~g-~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~l~~~g~l  306 (340)
T 3s2e_A          230 IG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGD-FGTPIFDVVLKGITIRG-SIVGTRSDLQESLDFAAHGDV  306 (340)
T ss_dssp             HS-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSE-EEEEHHHHHHTTCEEEE-CCSCCHHHHHHHHHHHHTTSC
T ss_pred             CC-CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCC-CCCCHHHHHhCCeEEEE-EecCCHHHHHHHHHHHHhCCC
Confidence            33 899999999865 489999999999999999866432 22334455667777877 445578899999999999999


Q ss_pred             eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          295 KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       295 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++.+ +.++++++++||+.+.+++..||+|+++
T Consensus       307 ~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          307 KATV-STAKLDDVNDVFGRLREGKVEGRVVLDF  338 (340)
T ss_dssp             CCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CceE-EEEeHHHHHHHHHHHHcCCCceEEEEec
Confidence            8754 5789999999999999999999999975

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=1.2e-53  Score=391.80  Aligned_cols=321  Identities=23%  Similarity=0.259  Sum_probs=269.3

Q ss_pred             CCCccceEEEEEeccC------------CCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCC---------
Q 020314            1 MAGKAVMHAVQYDSYG------------GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLR---------   59 (327)
Q Consensus         1 m~~~~~~~a~~~~~~g------------~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~---------   59 (327)
                      |.+|.+|||+++.+++            ++.+.+++++.+.|+|.++||+|||.++|||++|++...+...         
T Consensus        25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~  104 (456)
T 3krt_A           25 LPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERY  104 (456)
T ss_dssp             SCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHH
T ss_pred             CCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhc
Confidence            5689999999999862            2346799999999999999999999999999999876543211         


Q ss_pred             ----CC-CCCCCC-eeecccceEEEEecCCCCCCCCCCCEEEEEc---------------------------cCccccee
Q 020314           60 ----PF-LPRKFP-FIPASDVAGEVIGLGSEVKNFKVGDKVVAVL---------------------------SGGGLAEF  106 (327)
Q Consensus        60 ----~~-~~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~---------------------------~~g~~a~~  106 (327)
                          .. ....+| .++|||++|+|+++|+++++|++||||++.+                           .+|+|+||
T Consensus       105 g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey  184 (456)
T 3krt_A          105 GRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEI  184 (456)
T ss_dssp             HTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSE
T ss_pred             cccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccce
Confidence                00 012467 6999999999999999999999999999854                           14999999


Q ss_pred             EeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHh--hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEE
Q 020314          107 AVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQS--LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTAT  184 (327)
Q Consensus       107 ~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~--~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~  184 (327)
                      +++++++++++|+++++++||++++++.|||+++...  +++     ++|++|||+|++|++|++++|+|+..|++++++
T Consensus       185 ~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~-----~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~  259 (456)
T 3krt_A          185 ALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGM-----KQGDNVLIWGASGGLGSYATQFALAGGANPICV  259 (456)
T ss_dssp             EEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCC-----CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             EEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCC-----CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEE
Confidence            9999999999999999999999999999999999654  667     899999999988999999999999999999988


Q ss_pred             ec-CCcHHHHHhcCCCEEEeCCCCCc-------------------ccccCCCCCcccEEEeCCCCCcccccccccCCCcE
Q 020314          185 CG-ARNIELVKSLGADEVLDYKTPDG-------------------AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK  244 (327)
Q Consensus       185 ~~-~~~~~~~~~lg~~~v~~~~~~~~-------------------~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~  244 (327)
                      ++ ++|+++++++|++.++++.+.+.                   .+.+.+++.++|++|||+|++.+..++++++++|+
T Consensus       260 ~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~  339 (456)
T 3krt_A          260 VSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGT  339 (456)
T ss_dssp             ESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEE
T ss_pred             ECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcE
Confidence            75 47889999999999999876542                   23334566799999999999779999999999999


Q ss_pred             EEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEE
Q 020314          245 VIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKII  324 (327)
Q Consensus       245 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv  324 (327)
                      ++.+|...+....+....+.++.+++.+ +.....+++.++++++++|++++.++++|+++++++|++.+.+++..||+|
T Consensus       340 iv~~G~~~~~~~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~GKvv  418 (456)
T 3krt_A          340 ITTCASTSGYMHEYDNRYLWMSLKRIIG-SHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVG  418 (456)
T ss_dssp             EEESCCTTCSEEEEEHHHHHHTTCEEEE-CCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEE
T ss_pred             EEEEecCCCcccccCHHHHHhcCeEEEE-eccCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCCCCcEE
Confidence            9999865443233334455566677777 334556677789999999999999999999999999999999999999998


Q ss_pred             EeC
Q 020314          325 VEP  327 (327)
Q Consensus       325 v~~  327 (327)
                      |.+
T Consensus       419 v~~  421 (456)
T 3krt_A          419 VLC  421 (456)
T ss_dssp             EES
T ss_pred             EEe
Confidence            853

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2e-53  Score=380.85  Aligned_cols=311  Identities=22%  Similarity=0.263  Sum_probs=261.4

Q ss_pred             CCCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEe
Q 020314            1 MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG   80 (327)
Q Consensus         1 m~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   80 (327)
                      |+.|++|||+++++++++   +++++.+.|+|.++||+|||.++|||++|++++.|.++    ..+|.++|||++|+|++
T Consensus         1 ms~~~~mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~   73 (371)
T 1f8f_A            1 MSELKDIIAAVTPCKGAD---FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP----VPLPAVLGHEGSGIIEA   73 (371)
T ss_dssp             ---CEEEEEEEBCSTTCC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCEEEEEEEE
T ss_pred             CCccccceEEEEcCCCCC---eEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC----CCCCcccCcccceEEEE
Confidence            889999999999988754   88999999999999999999999999999999998753    35789999999999999


Q ss_pred             cCCCCCCCCCCCEEEEEc-------------------------------------------------cCcccceeEeecC
Q 020314           81 LGSEVKNFKVGDKVVAVL-------------------------------------------------SGGGLAEFAVAKE  111 (327)
Q Consensus        81 vG~~~~~~~~Gd~V~~~~-------------------------------------------------~~g~~a~~~~~~~  111 (327)
                      +|+++++|++||||++.+                                                 .+|+|+||+++++
T Consensus        74 vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~  153 (371)
T 1f8f_A           74 IGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRE  153 (371)
T ss_dssp             ECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEG
T ss_pred             eCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEech
Confidence            999999999999998631                                                 2489999999999


Q ss_pred             CceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCc
Q 020314          112 SLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARN  189 (327)
Q Consensus       112 ~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~  189 (327)
                      +.++++|+++++++||.+++++.|||+++.+..++     ++|++|||+| +|++|++++|+|+++|+ +|+++++ ++|
T Consensus       154 ~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~-----~~g~~VlV~G-aG~vG~~a~qlak~~Ga~~Vi~~~~~~~~  227 (371)
T 1f8f_A          154 NNTVKVTKDVPIELLGPLGCGIQTGAGACINALKV-----TPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDIVESR  227 (371)
T ss_dssp             GGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCC-----CTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEESCHHH
T ss_pred             hheEECCCCCCHHHHHHhcchHHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHH
Confidence            99999999999999999999999999999777888     8999999999 69999999999999999 6888884 578


Q ss_pred             HHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCch-hHHHHhhhhccc
Q 020314          190 IELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPR-VLLTFAWKKLTF  265 (327)
Q Consensus       190 ~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~  265 (327)
                      +++++++|++.++++++.+.  .+.+.+.+ ++|++||++|.+ .+..++++++++|+++.+|.... ....+....+..
T Consensus       228 ~~~a~~lGa~~vi~~~~~~~~~~~~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~  306 (371)
T 1f8f_A          228 LELAKQLGATHVINSKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLL  306 (371)
T ss_dssp             HHHHHHHTCSEEEETTTSCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHH
T ss_pred             HHHHHHcCCCEEecCCccCHHHHHHHhcCC-CCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHh
Confidence            89999999999999876552  23344555 899999999974 58899999999999999986542 112233334556


Q ss_pred             cceeeEEEEeC--CCHHHHHHHHHHHHCCceeE--ecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          266 SKKQLVPFSVS--PKGENLDFLVKLVKEGKLKT--VIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       266 ~~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++.+....  ...++++++++++++|++++  ++++ |+++++++||+.+.+++. +|+|+.+
T Consensus       307 ~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          307 GGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             TTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             CCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEee
Confidence            67777764321  12477999999999999874  5667 999999999999998876 7999875

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=6.4e-54  Score=377.55  Aligned_cols=308  Identities=23%  Similarity=0.229  Sum_probs=262.3

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||++++++|+ ++.+++++.+.|+|.++||+|||.++|||++|++.+.|.++.  ...+|.++|||++|+|+++|  ++
T Consensus         1 MkA~~~~~~g~-~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~~G--v~   75 (324)
T 3nx4_A            1 MQALILEQQDG-KTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKI--IRHFPMIPGIDFAGTVHASE--DP   75 (324)
T ss_dssp             CEEEEEEESSS-SEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTC--CCSSSBCCCSEEEEEEEEES--ST
T ss_pred             CceEEEecCCC-CceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCC--CCCCCccccceeEEEEEEeC--CC
Confidence            89999999987 578999999999999999999999999999999999998642  23689999999999999998  57


Q ss_pred             CCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHh--hCCccCCCCCCC-eE
Q 020314           87 NFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQS--LGVKLDGSGQQK-NI  157 (327)
Q Consensus        87 ~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~--~~~~~~~~~~~~-~v  157 (327)
                      +|++||||++..      .+|+|+||++++++.++++|+++++++||++++.++|||+++...  .++     ++++ +|
T Consensus        76 ~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~-----~~~~g~V  150 (324)
T 3nx4_A           76 RFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGI-----RPQDGEV  150 (324)
T ss_dssp             TCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTC-----CGGGCCE
T ss_pred             CCCCCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhccc-----CCCCCeE
Confidence            899999999763      679999999999999999999999999999999999999998643  444     4432 39


Q ss_pred             EEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccc
Q 020314          158 LITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFE  236 (327)
Q Consensus       158 lV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~  236 (327)
                      ||+|++|++|++++|+|++.|++|++++ +++|+++++++|++.++|+++.+.  .+...+.++|++|||+|++.+..++
T Consensus       151 lV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~--~~~~~~~~~d~v~d~~g~~~~~~~~  228 (324)
T 3nx4_A          151 VVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAE--SRPLEKQLWAGAIDTVGDKVLAKVL  228 (324)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSC--CCSSCCCCEEEEEESSCHHHHHHHH
T ss_pred             EEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHH--HHhhcCCCccEEEECCCcHHHHHHH
Confidence            9999999999999999999999999998 568899999999999999876544  3334446899999999988899999


Q ss_pred             cccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC-CC----HHHHHHHHHHHHCCceeEecceeeccccHHHHH
Q 020314          237 PNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS-PK----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAW  311 (327)
Q Consensus       237 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~  311 (327)
                      ++++++|+++.+|........+....+..+++++.++... ..    .+.++.+++++++|++++. .++|+++++++||
T Consensus       229 ~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~  307 (324)
T 3nx4_A          229 AQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA-ATEITLADAPKFA  307 (324)
T ss_dssp             HTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH-EEEEEGGGHHHHH
T ss_pred             HHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC-ceeEeHHHHHHHH
Confidence            9999999999998664432233334455677777774332 12    3567889999999999877 8899999999999


Q ss_pred             HHHhcCCCCccEEEeC
Q 020314          312 AKSISGRATGKIIVEP  327 (327)
Q Consensus       312 ~~~~~~~~~gkvvv~~  327 (327)
                      +.+.+++..||+|+++
T Consensus       308 ~~~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          308 DAIINNQVQGRTLVKI  323 (324)
T ss_dssp             HHHHTTCCCSEEEEEC
T ss_pred             HHHHhCCCCceEEEec
Confidence            9999999999999975

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=3.4e-53  Score=380.16  Aligned_cols=310  Identities=16%  Similarity=0.188  Sum_probs=262.1

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .|++|||+++++++++   +++++.+.|+|.++||+|||.++|||++|++++.|..+   ...+|.++|||++|+|+++|
T Consensus         5 ~~~tmkA~v~~~~~~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG   78 (378)
T 3uko_A            5 QVITCKAAVAYEPNKP---LVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVG   78 (378)
T ss_dssp             SCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEEC
T ss_pred             cceeeEEEEEecCCCc---cEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCC---CCCCCccCCccceEEEEEeC
Confidence            4789999999998875   99999999999999999999999999999999999864   23689999999999999999


Q ss_pred             CCCCCCCCCCEEEEEcc-------------------------------------------------CcccceeEeecCCc
Q 020314           83 SEVKNFKVGDKVVAVLS-------------------------------------------------GGGLAEFAVAKESL  113 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~~-------------------------------------------------~g~~a~~~~~~~~~  113 (327)
                      +++++|++||||++...                                                 .|+|+||++++++.
T Consensus        79 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  158 (378)
T 3uko_A           79 EGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVS  158 (378)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             CCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhh
Confidence            99999999999987542                                                 16999999999999


Q ss_pred             eeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHH
Q 020314          114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIE  191 (327)
Q Consensus       114 ~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~  191 (327)
                      ++++|+++++++||.+++++.|||+++.+..++     ++|++|||+|+ |++|++++|+|+++|+ +|++++ +++|++
T Consensus       159 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~-----~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~  232 (378)
T 3uko_A          159 VAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKV-----EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE  232 (378)
T ss_dssp             EEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCC-----CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH
T ss_pred             eEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCC-----CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            999999999999999999999999999888888     89999999995 9999999999999999 899998 568899


Q ss_pred             HHHhcCCCEEEeCCC--CC--cccccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCch-hHHHHhhhhcc
Q 020314          192 LVKSLGADEVLDYKT--PD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPR-VLLTFAWKKLT  264 (327)
Q Consensus       192 ~~~~lg~~~v~~~~~--~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~  264 (327)
                      +++++|++.++|+.+  .+  ..+.+.+.+ ++|++|||+|++ .+..++++++++ |+++.+|.... ....+....+ 
T Consensus       233 ~a~~lGa~~vi~~~~~~~~~~~~i~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~-  310 (378)
T 3uko_A          233 TAKKFGVNEFVNPKDHDKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-  310 (378)
T ss_dssp             HHHTTTCCEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHH-
T ss_pred             HHHHcCCcEEEccccCchhHHHHHHHhcCC-CCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHH-
Confidence            999999999999873  33  223444555 999999999985 589999999996 99999996432 1112222222 


Q ss_pred             ccceeeEEEEeC--CCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          265 FSKKQLVPFSVS--PKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       265 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++++.+....  ...++++++++++++|+++  ++++++|+++++++||+.+.+++.. |+|+++
T Consensus       311 ~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~  376 (378)
T 3uko_A          311 VTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDT  376 (378)
T ss_dssp             HTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEET
T ss_pred             hcCcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEec
Confidence            235566663321  2467899999999999987  4688999999999999999988875 999875

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.4e-53  Score=375.32  Aligned_cols=315  Identities=28%  Similarity=0.409  Sum_probs=263.6

Q ss_pred             CccceEEEEEeccCCCccceEE-eeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKH-VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~-~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      .|.+|||+++.+++. ++.+++ ++.+.|+|.++||+|||.++|||++|++++.|.++.  ...+|.++|||++|+|+++
T Consensus        26 ~~~~Mka~~~~~~g~-~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~~v  102 (351)
T 1yb5_A           26 GQKLMRAVRVFEFGG-PEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KPLLPYTPGSDVAGVIEAV  102 (351)
T ss_dssp             --CEEEEEEESSCSS-GGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSBCCCSCEEEEEEEE
T ss_pred             CcceEEEEEEccCCC-cceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcCCceeEEEEEEE
Confidence            577899999998876 578999 799999999999999999999999999999987642  1257899999999999999


Q ss_pred             CCCCCCCCCCCEEEEEcc-CcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE
Q 020314           82 GSEVKNFKVGDKVVAVLS-GGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT  160 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~~-~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~  160 (327)
                      |+++++|++||||++... .|+|+||++++++.++++|+++++++||++++++.|||+++.+..++     +++++|||+
T Consensus       103 G~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~-----~~g~~vlV~  177 (351)
T 1yb5_A          103 GDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACV-----KAGESVLVH  177 (351)
T ss_dssp             CTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCC-----CTTCEEEEE
T ss_pred             CCCCCCCCCCCEEEEeCCCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCC-----CCcCEEEEE
Confidence            999999999999998643 69999999999999999999999999999999999999999777888     899999999


Q ss_pred             cCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCccccccc
Q 020314          161 AASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEP  237 (327)
Q Consensus       161 g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~  237 (327)
                      |++|++|++++|+++..|++|++++++ ++++.++++|++.++|+++.+.  .+.+.+.++++|++|||+|++.+..+++
T Consensus       178 GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~  257 (351)
T 1yb5_A          178 GASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLS  257 (351)
T ss_dssp             TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChHHHHHHHH
Confidence            999999999999999999999999854 6788889999999998876552  2333445568999999999877889999


Q ss_pred             ccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-CCCHHHH----HHHHHHHHCCceeEecceeeccccHHHHHH
Q 020314          238 NLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-SPKGENL----DFLVKLVKEGKLKTVIDSKHSLSKAEDAWA  312 (327)
Q Consensus       238 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~  312 (327)
                      +++++|+++.+|....  ..+....+..+++++.++.. ...++++    +.+.+++++|++++++.++|+++++++|++
T Consensus       258 ~l~~~G~iv~~g~~~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~~~~~A~~  335 (351)
T 1yb5_A          258 LLSHGGRVIVVGSRGT--IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHE  335 (351)
T ss_dssp             HEEEEEEEEECCCCSC--EEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCEEEEEEGGGHHHHHH
T ss_pred             hccCCCEEEEEecCCC--CccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCccceEEcHHHHHHHHH
Confidence            9999999999996422  12223334556667766432 2234444    456667888999999999999999999999


Q ss_pred             H-HhcCCCCccEEEeC
Q 020314          313 K-SISGRATGKIIVEP  327 (327)
Q Consensus       313 ~-~~~~~~~gkvvv~~  327 (327)
                      . +.+++..||+|+++
T Consensus       336 ~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          336 NIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHSSCCSSEEEEEC
T ss_pred             HHHHhCCCCeEEEEeC
Confidence            8 66667789999975

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.8e-52  Score=372.57  Aligned_cols=308  Identities=21%  Similarity=0.274  Sum_probs=258.6

Q ss_pred             CCCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEe
Q 020314            1 MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG   80 (327)
Q Consensus         1 m~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   80 (327)
                      |++||+|+++++.+.+   +.+++++.+.|+|.++||+|||.++|||++|++.+.|.++.   ..+|.++|||++|+|++
T Consensus         4 m~~~m~~~a~~~~~~~---~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~   77 (357)
T 2cf5_A            4 MEAERKTTGWAARDPS---GILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM---SNYPMVPGHEVVGEVVE   77 (357)
T ss_dssp             --CCCEEEEEEECSTT---CCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC---CCSSBCCCCEEEEEEEE
T ss_pred             ccCcceeEEEEEccCC---CCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC---CCCCeecCcceeEEEEE
Confidence            6789999999987643   45999999999999999999999999999999999887542   35789999999999999


Q ss_pred             cCCCCCCCCCCCEEEEEc-----------------------------------cCcccceeEeecCCceeeCCCCCChhh
Q 020314           81 LGSEVKNFKVGDKVVAVL-----------------------------------SGGGLAEFAVAKESLTVARPQEVSAAE  125 (327)
Q Consensus        81 vG~~~~~~~~Gd~V~~~~-----------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~  125 (327)
                      +|+++++|++||||+..+                                   .+|+|+||++++++.++++|+++++++
T Consensus        78 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~  157 (357)
T 2cf5_A           78 VGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQ  157 (357)
T ss_dssp             ECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHH
T ss_pred             ECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHH
Confidence            999999999999997521                                   369999999999999999999999999


Q ss_pred             hcccCchHHHHHHHHHHhhCCccCCCC-CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH-hcCCCEEE
Q 020314          126 GAGIPCAGLTAHQALTQSLGVKLDGSG-QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK-SLGADEVL  202 (327)
Q Consensus       126 aa~~~~~~~ta~~al~~~~~~~~~~~~-~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~-~lg~~~v~  202 (327)
                      ||.+++++.|||+++. ..++     + +|++|||+| +|++|++++|+|+.+|++|+++++ +++++.++ ++|++.++
T Consensus       158 aa~l~~~~~ta~~~l~-~~~~-----~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi  230 (357)
T 2cf5_A          158 AAPLLCAGVTVYSPLS-HFGL-----KQPGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYV  230 (357)
T ss_dssp             HTGGGTHHHHHHHHHH-HTST-----TSTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEE
T ss_pred             hhhhhhhHHHHHHHHH-hcCC-----CCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceee
Confidence            9999999999999995 4566     6 999999999 699999999999999999999985 46778877 99999999


Q ss_pred             eCCCCCcccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHH
Q 020314          203 DYKTPDGAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGEN  281 (327)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (327)
                      ++++.+ .+.+.+  .++|++||++|.+ .+..++++++++|+++.+|........+... +..+++++.+. .....++
T Consensus       231 ~~~~~~-~~~~~~--~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~-~~~~~~~  305 (357)
T 2cf5_A          231 IGSDQA-KMSELA--DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGS-FIGSMKE  305 (357)
T ss_dssp             ETTCHH-HHHHST--TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEEC-CSCCHHH
T ss_pred             ccccHH-HHHHhc--CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEE-ccCCHHH
Confidence            876532 222222  3799999999976 5899999999999999998654321112223 55677777773 3446788


Q ss_pred             HHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          282 LDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       282 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++++++++|++++.+ ++|+++++++||+.+.+++..||+|+.+
T Consensus       306 ~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          306 TEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_dssp             HHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEET
T ss_pred             HHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeC
Confidence            99999999999998765 6999999999999999999899999864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=3.9e-53  Score=373.75  Aligned_cols=315  Identities=22%  Similarity=0.275  Sum_probs=261.5

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.++|. ++.+++++.+.|+|.++||+|||.++|||++|++++.|.+.+.....+|.++|||++|+|+++|++++
T Consensus         2 Mka~~~~~~g~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~   80 (333)
T 1wly_A            2 VMAAVIHKKGG-PDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT   80 (333)
T ss_dssp             CEEEEESSCSS-GGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred             cEEEEEcccCC-cceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence            89999999886 57899999999999999999999999999999999988651100025789999999999999999999


Q ss_pred             CCCCCCEEEEEcc-CcccceeEeecCCceeeCCCCCChhh--hcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCC
Q 020314           87 NFKVGDKVVAVLS-GGGLAEFAVAKESLTVARPQEVSAAE--GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAAS  163 (327)
Q Consensus        87 ~~~~Gd~V~~~~~-~g~~a~~~~~~~~~~~~ip~~~~~~~--aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~  163 (327)
                      +|++||||++... +|+|+||++++++.++++|+++++++  ||+++.++.|||+++.+..++     +++++|||+|++
T Consensus        81 ~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~-----~~g~~vlV~Ga~  155 (333)
T 1wly_A           81 DFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKV-----KPGDYVLIHAAA  155 (333)
T ss_dssp             SCCTTCEEEECSSSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCC-----CTTCEEEETTTT
T ss_pred             CCCCCCEEEEecCCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCC-----CCCCEEEEECCc
Confidence            9999999987544 79999999999999999999999999  999999999999999777888     899999999999


Q ss_pred             ChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCcccccccccC
Q 020314          164 GAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEPNLG  240 (327)
Q Consensus       164 g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~  240 (327)
                      |++|++++|+++..|++|++++++ ++++.++++|++.++|+++.+.  .+.+.+.+.++|++|||+|+..+..++++++
T Consensus       156 ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~~~~l~  235 (333)
T 1wly_A          156 GGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLR  235 (333)
T ss_dssp             STTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTTTHHHHHHTEE
T ss_pred             cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHHHHHHHHHhhc
Confidence            999999999999999999999865 5788888999999998876552  2333344568999999999977999999999


Q ss_pred             CCcEEEeecCCchhHHHHhhh-hccccc--eeeEEEEe--CCC----HHHHHHHHHHHHCCceeEecceeeccccHHHHH
Q 020314          241 TTGKVIDFNPSPRVLLTFAWK-KLTFSK--KQLVPFSV--SPK----GENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAW  311 (327)
Q Consensus       241 ~~G~~v~~g~~~~~~~~~~~~-~~~~~~--~~~~~~~~--~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~  311 (327)
                      ++|+++.+|...+....+... .+..++  +++.+...  ...    .+.++++++++++|++++.++++|+++++++||
T Consensus       236 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~  315 (333)
T 1wly_A          236 PRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVAKTFPLREAAAAH  315 (333)
T ss_dssp             EEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHH
T ss_pred             cCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCCcceEEeHHHHHHHH
Confidence            999999998654221122222 344455  55555321  112    246899999999999999888999999999999


Q ss_pred             HHHhcCCCCccEEEeC
Q 020314          312 AKSISGRATGKIIVEP  327 (327)
Q Consensus       312 ~~~~~~~~~gkvvv~~  327 (327)
                      +.+.+++..||+|+++
T Consensus       316 ~~~~~~~~~gKvvi~~  331 (333)
T 1wly_A          316 KYMGGRQTIGSIVLLP  331 (333)
T ss_dssp             HHHHHCSCCSEEEEET
T ss_pred             HHHHcCCCceEEEEEe
Confidence            9999998899999875

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.2e-52  Score=367.56  Aligned_cols=311  Identities=23%  Similarity=0.315  Sum_probs=263.1

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      +|.+|||+++++++++   +++++.+.|+|.++||+|||.++|||++|++.+.|.++.  ...+|.++|||++|+|+++|
T Consensus         2 ~p~~mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~vG   76 (347)
T 2hcy_A            2 IPETQKGVIFYESHGK---LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPL--PVKLPLVGGHEGAGVVVGMG   76 (347)
T ss_dssp             CCSEEEEEEESSTTCC---CEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSEECCCEEEEEEEEEC
T ss_pred             CCcccEEEEEeCCCCC---CEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCC--CCCCCcccCccceEEEEEEC
Confidence            5789999999988743   899999999999999999999999999999999987641  13579999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHH
Q 020314           83 SEVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGL  134 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  134 (327)
                      +++++|++||||++.+                            .+|+|+||++++++.++++|+++++++||.+++++.
T Consensus        77 ~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  156 (347)
T 2hcy_A           77 ENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGI  156 (347)
T ss_dssp             TTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHH
T ss_pred             CCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHH
Confidence            9999999999998631                            268999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCC-CC-cc-
Q 020314          135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKT-PD-GA-  210 (327)
Q Consensus       135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~-~~-~~-  210 (327)
                      |||+++.+ .++     ++|++|||+|++|++|++++++++..|++|+++++ +++.+.++++|++.++|+.+ .+ .+ 
T Consensus       157 ta~~~l~~-~~~-----~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~  230 (347)
T 2hcy_A          157 TVYKALKS-ANL-----MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGA  230 (347)
T ss_dssp             HHHHHHHT-TTC-----CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHH
T ss_pred             HHHHHHHh-cCC-----CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHH
Confidence            99999954 477     89999999999899999999999999999999984 57788889999999888763 33 12 


Q ss_pred             cccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHH
Q 020314          211 ALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLV  289 (327)
Q Consensus       211 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (327)
                      +.+.+.+ ++|++||++|. ..++.++++|+++|+++.+|...+....+....+..+++++.+. .....++++++++++
T Consensus       231 ~~~~~~~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~-~~~~~~~~~~~~~l~  308 (347)
T 2hcy_A          231 VLKATDG-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGS-YVGNRADTREALDFF  308 (347)
T ss_dssp             HHHHHTS-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEEC-CCCCHHHHHHHHHHH
T ss_pred             HHHHhCC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEc-cCCCHHHHHHHHHHH
Confidence            2222334 79999999997 55889999999999999998654322223333455677777773 344678899999999


Q ss_pred             HCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          290 KEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       290 ~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++|++++. .++|+++++++||+.+.+++..||+|+++
T Consensus       309 ~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          309 ARGLVKSP-IKVVGLSTLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             HTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEES
T ss_pred             HhCCCccc-eEEEcHHHHHHHHHHHHcCCcceeEEEec
Confidence            99999875 46899999999999999988889999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1.6e-52  Score=372.53  Aligned_cols=306  Identities=19%  Similarity=0.243  Sum_probs=261.3

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHH-HHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWK-LQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      |||++++++++    +++++.+.|+|.++||+|||.++|||++|++ ++.|.++    ..+|.++|||++|+|+++|+++
T Consensus         1 MkA~~~~~~~~----~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~p~v~G~E~~G~V~~vG~~v   72 (352)
T 3fpc_A            1 MKGFAMLSIGK----VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG----ERHNMILGHEAVGEVVEVGSEV   72 (352)
T ss_dssp             CEEEEEEETTE----EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC----CCSSEECCCEEEEEEEEECTTC
T ss_pred             CeEEEEccCCC----ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC----CCCCcccCCcceEEEEEECCCC
Confidence            89999998876    8899999999999999999999999999999 6678764    3679999999999999999999


Q ss_pred             CCCCCCCEEEEEc------------------------------cCcccceeEeecCC--ceeeCCCCCChhhhcccCchH
Q 020314           86 KNFKVGDKVVAVL------------------------------SGGGLAEFAVAKES--LTVARPQEVSAAEGAGIPCAG  133 (327)
Q Consensus        86 ~~~~~Gd~V~~~~------------------------------~~g~~a~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~  133 (327)
                      ++|++||||++.+                              .+|+|+||+++++.  .++++|+++++++|+.++.++
T Consensus        73 ~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~  152 (352)
T 3fpc_A           73 KDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMM  152 (352)
T ss_dssp             CSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHH
T ss_pred             CcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchh
Confidence            9999999999632                              46999999999986  899999999999999999999


Q ss_pred             HHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCC--c
Q 020314          134 LTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPD--G  209 (327)
Q Consensus       134 ~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~  209 (327)
                      .|||+++ +..++     ++|++|||+| +|++|++++|+|++.|+ +|++++++ +|+++++++|++.++++++.+  .
T Consensus       153 ~ta~~al-~~~~~-----~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~  225 (352)
T 3fpc_A          153 TTGFHGA-ELANI-----KLGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVE  225 (352)
T ss_dssp             HHHHHHH-HHTTC-----CTTCCEEEEC-CSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHH
T ss_pred             HHHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHH
Confidence            9999999 77888     8999999998 69999999999999999 89998864 678999999999999987766  3


Q ss_pred             ccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchh-HHHH--hhhhccccceeeEEEEeCCCHHHHHHH
Q 020314          210 AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRV-LLTF--AWKKLTFSKKQLVPFSVSPKGENLDFL  285 (327)
Q Consensus       210 ~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
                      .+.+.++++++|++||++|++ .+..++++++++|+++.+|..... ...+  ......++.+++.+......+++++++
T Consensus       226 ~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  305 (352)
T 3fpc_A          226 QILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERL  305 (352)
T ss_dssp             HHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHH
T ss_pred             HHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHH
Confidence            455667778999999999985 599999999999999999865321 1111  112233466677764433447789999


Q ss_pred             HHHHHCCceeE--ecceeec-cccHHHHHHHHhcCCCC-ccEEEeC
Q 020314          286 VKLVKEGKLKT--VIDSKHS-LSKAEDAWAKSISGRAT-GKIIVEP  327 (327)
Q Consensus       286 ~~~~~~g~l~~--~~~~~~~-~~~~~~a~~~~~~~~~~-gkvvv~~  327 (327)
                      ++++++|++++  +++++|+ ++++++||+.+.+++.. +|+|+++
T Consensus       306 ~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          306 IDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             HHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             HHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            99999999875  5778999 99999999999987654 8999975

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1.6e-52  Score=375.73  Aligned_cols=309  Identities=18%  Similarity=0.202  Sum_probs=259.3

Q ss_pred             CCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314            2 AGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         2 ~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      ++|++|||+++.+++++   +++++.+.|+|.++||+|||.++|||++|++++.|. +   ...+|.++|||++|+|+++
T Consensus         4 ~~p~~mka~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~---~~~~P~v~GhE~~G~V~~v   76 (376)
T 1e3i_A            4 GKVIKCKAAIAWKTGSP---LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-K---KALFPVVLGHECAGIVESV   76 (376)
T ss_dssp             TSCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-S---CCCSSBCCCCEEEEEEEEE
T ss_pred             CCChheeEEEEecCCCC---eEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-C---CCCCCcccCccccEEEEEE
Confidence            47999999999988754   889999999999999999999999999999998886 2   1367999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEc----------------------------------------------------cCcccceeEee
Q 020314           82 GSEVKNFKVGDKVVAVL----------------------------------------------------SGGGLAEFAVA  109 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~----------------------------------------------------~~g~~a~~~~~  109 (327)
                      |++++++++||||++.+                                                    ..|+|+||+++
T Consensus        77 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v  156 (376)
T 1e3i_A           77 GPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVV  156 (376)
T ss_dssp             CTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEE
T ss_pred             CCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEe
Confidence            99999999999998742                                                    13899999999


Q ss_pred             cCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cC
Q 020314          110 KESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GA  187 (327)
Q Consensus       110 ~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~  187 (327)
                      +++.++++|+++++++||++++++.|||+++.+..++     ++|++|||+| +|++|++++|+|+++|+ +|++++ ++
T Consensus       157 ~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~-----~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~  230 (376)
T 1e3i_A          157 SEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKV-----TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDING  230 (376)
T ss_dssp             EGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             ccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence            9999999999999999999999999999999777888     8999999999 59999999999999999 899987 55


Q ss_pred             CcHHHHHhcCCCEEEeCCC--CC-c-ccccCCCCCcccEEEeCCCC-CcccccccccCCC-cEEEeecCCchhHHHHhhh
Q 020314          188 RNIELVKSLGADEVLDYKT--PD-G-AALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTT-GKVIDFNPSPRVLLTFAWK  261 (327)
Q Consensus       188 ~~~~~~~~lg~~~v~~~~~--~~-~-~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~  261 (327)
                      +++++++++|++.++|+++  .+ . .+.+.+.+ ++|++||++|+ +.+..++++++++ |+++.+|.... ...+...
T Consensus       231 ~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~-g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~-~~~~~~~  308 (376)
T 1e3i_A          231 EKFPKAKALGATDCLNPRELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD-EMTIPTV  308 (376)
T ss_dssp             GGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTS-CBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS-EEEEEHH
T ss_pred             HHHHHHHHhCCcEEEccccccchHHHHHHHHhCC-CccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCC-ccccCHH
Confidence            7899999999999998874  23 1 23333444 89999999997 4588999999999 99999987322 1222233


Q ss_pred             hccccceeeEEEEeC--CCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          262 KLTFSKKQLVPFSVS--PKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       262 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .+..+. ++.+....  ...++++++++++++|+++  ++++++|+++++++||+.+.+++ .+|+|+++
T Consensus       309 ~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          309 DVILGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             HHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             HhhccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEEeC
Confidence            344455 66663321  1357899999999999987  46788999999999999999877 47999875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.1e-53  Score=370.91  Aligned_cols=311  Identities=24%  Similarity=0.300  Sum_probs=261.6

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.++|. ++.+++++.+.|+|.++||+|||.++|||++|++.+.|.++   ...+|.++|||++|+|+++|++++
T Consensus         2 Mka~~~~~~g~-~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~G~E~~G~V~~vG~~v~   77 (327)
T 1qor_A            2 ATRIEFHKHGG-PEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP---PPSLPSGLGTEAAGIVSKVGSGVK   77 (327)
T ss_dssp             CEEEEBSSCCS-GGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CSSSSBCCCSCEEEEEEEECTTCC
T ss_pred             cEEEEEcCCCC-hhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---CCCCCCCCCceeEEEEEEECCCCC
Confidence            89999998876 56899999999999999999999999999999999998763   125789999999999999999999


Q ss_pred             CCCCCCEEEEEc--cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCC
Q 020314           87 NFKVGDKVVAVL--SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASG  164 (327)
Q Consensus        87 ~~~~Gd~V~~~~--~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g  164 (327)
                      +|++|||| +.+  .+|+|+||++++++.++++|+++++++||+++.++.|||+++.+..++     +++++|||+||+|
T Consensus        78 ~~~~GdrV-~~~g~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~-----~~g~~vlV~Ga~g  151 (327)
T 1qor_A           78 HIKAGDRV-VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEI-----KPDEQFLFHAAAG  151 (327)
T ss_dssp             SCCTTCEE-EESCCSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCC-----CTTCEEEESSTTB
T ss_pred             CCCCCCEE-EECCCCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCC-----CCCCEEEEECCCC
Confidence            99999999 444  459999999999999999999999999999999999999999767888     8999999999999


Q ss_pred             hHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCcccccccccCC
Q 020314          165 AVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEPNLGT  241 (327)
Q Consensus       165 ~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~  241 (327)
                      ++|++++|+++..|++|++++++ ++++.++++|++.++|+.+.+.  .+.+.+.++++|++|||+|++.+..+++++++
T Consensus       152 giG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~  231 (327)
T 1qor_A          152 GVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQR  231 (327)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhcC
Confidence            99999999999999999999865 6788888899999998876552  33344555689999999997779999999999


Q ss_pred             CcEEEeecCCchhHHHHhhhhcccc-ceeeEEEEe---CC----CHHHHHHHHHHHHCCceeEecc--eeeccccHHHHH
Q 020314          242 TGKVIDFNPSPRVLLTFAWKKLTFS-KKQLVPFSV---SP----KGENLDFLVKLVKEGKLKTVID--SKHSLSKAEDAW  311 (327)
Q Consensus       242 ~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~----~~~~~~~~~~~~~~g~l~~~~~--~~~~~~~~~~a~  311 (327)
                      +|+++.+|...+....+....+..+ .+.+.+...   ..    ..+.++++++++++|++++.++  ++|+++++++|+
T Consensus       232 ~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l~~~~~A~  311 (327)
T 1qor_A          232 RGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAH  311 (327)
T ss_dssp             EEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEGGGHHHHH
T ss_pred             CCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccccccCcEEcHHHHHHHH
Confidence            9999999865332111222223333 344432111   11    2456889999999999999888  899999999999


Q ss_pred             HHHhcCCCCccEEEeC
Q 020314          312 AKSISGRATGKIIVEP  327 (327)
Q Consensus       312 ~~~~~~~~~gkvvv~~  327 (327)
                      +.+.+++..||+|+++
T Consensus       312 ~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          312 EILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHTTCCCBCCEEEC
T ss_pred             HHHHhCCCCceEEEeC
Confidence            9999998899999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2e-52  Score=374.81  Aligned_cols=310  Identities=17%  Similarity=0.166  Sum_probs=260.1

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      +|++|||+++.+++++   +++++.+.|+|.++||+|||.++|||++|++++.|.++.   ..+|.++|||++|+|+++|
T Consensus         3 ~p~~mkA~~~~~~~~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG   76 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE---GCFPVILGHLGAGIVESVG   76 (373)
T ss_dssp             CCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT---CCSSBCCCCEEEEEEEEEC
T ss_pred             CccceEEEEEecCCCC---cEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCC---CCCCccccccccEEEEEEC
Confidence            7899999999988754   889999999999999999999999999999999987642   2579999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCce
Q 020314           83 SEVKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLT  114 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~  114 (327)
                      +++++|++||||++..                                                ..|+|+||++++++.+
T Consensus        77 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  156 (373)
T 2fzw_A           77 EGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISV  156 (373)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhhe
Confidence            9999999999998752                                                1389999999999999


Q ss_pred             eeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHH
Q 020314          115 VARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIEL  192 (327)
Q Consensus       115 ~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~  192 (327)
                      +++|+++++++||++++++.|||+++.+..++     ++|++|||+| +|++|++++|+|+++|+ +|++++ +++++++
T Consensus       157 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~-----~~g~~VlV~G-aG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~  230 (373)
T 2fzw_A          157 AKIDPLAPLDKVCLLGCGISTGYGAAVNTAKL-----EPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDINKDKFAR  230 (373)
T ss_dssp             EECCTTSCHHHHGGGGTHHHHHHHHHHTTTCC-----CTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHH
T ss_pred             EECCCCCCHHHHhhhccHHHHHHHHHHhhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            99999999999999999999999999778888     8999999999 59999999999999999 899988 5578999


Q ss_pred             HHhcCCCEEEeCCC--CC-c-ccccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCch-hHHHHhhhhccc
Q 020314          193 VKSLGADEVLDYKT--PD-G-AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPR-VLLTFAWKKLTF  265 (327)
Q Consensus       193 ~~~lg~~~v~~~~~--~~-~-~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~  265 (327)
                      ++++|++.++++++  .+ . .+.+.+.+ ++|++||++|++ .+..++++++++ |+++.+|.... ....+....+..
T Consensus       231 ~~~lGa~~vi~~~~~~~~~~~~v~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~  309 (373)
T 2fzw_A          231 AKEFGATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVT  309 (373)
T ss_dssp             HHHHTCSEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT
T ss_pred             HHHcCCceEeccccccccHHHHHHHHhCC-CCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhc
Confidence            99999999998764  23 1 23333444 899999999974 588999999999 99999986542 111222223344


Q ss_pred             cceeeEEEEeC--CCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          266 SKKQLVPFSVS--PKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       266 ~~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++ ++.+....  ...++++++++++++|+++  ++++++|+++++++||+.+.+++. +|+++++
T Consensus       310 ~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          310 GR-TWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             TC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             CC-EEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            55 66663221  1357899999999999987  567889999999999999998876 6999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=2.6e-52  Score=373.90  Aligned_cols=308  Identities=19%  Similarity=0.197  Sum_probs=258.8

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .|++|||+++.+++++   +++++.+.|+|.++||+|||.++|||++|++++.|.++    ..+|.++|||++|+|+++|
T Consensus         6 ~p~~mka~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG   78 (373)
T 1p0f_A            6 KDITCKAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP----SKFPVILGHEAVGVVESIG   78 (373)
T ss_dssp             SCEEEEEEEBSSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCCEEEEEEEEC
T ss_pred             CcceeEEEEEEcCCCC---eeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC----CCCCcccCcCceEEEEEEC
Confidence            7999999999988754   88999999999999999999999999999999998753    3578999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCce
Q 020314           83 SEVKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLT  114 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~  114 (327)
                      +++++|++||||++..                                                ..|+|+||++++++.+
T Consensus        79 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  158 (373)
T 1p0f_A           79 AGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAV  158 (373)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSE
T ss_pred             CCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhE
Confidence            9999999999998753                                                1389999999999999


Q ss_pred             eeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHH
Q 020314          115 VARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIEL  192 (327)
Q Consensus       115 ~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~  192 (327)
                      +++|++++++ ||.+++++.|||+++.+..++     ++|++|||+| +|++|++++|+|+++|+ +|++++ +++|+++
T Consensus       159 ~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~-----~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  231 (373)
T 1p0f_A          159 AKIDPKAPLE-SCLIGCGFATGYGAAVNTAKV-----TPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPK  231 (373)
T ss_dssp             EEECTTCCGG-GGGGGTHHHHHHHHHHTTTCC-----CTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHH
T ss_pred             EECCCCCChh-hhhhhhHHHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            9999999999 999999999999999778888     8999999999 69999999999999999 899988 5578999


Q ss_pred             HHhcCCCEEEeCCC--CC-c-ccccCCCCCcccEEEeCCCC-CcccccccccCCC-cEEEeecCCch-hHHHHhhhhccc
Q 020314          193 VKSLGADEVLDYKT--PD-G-AALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTT-GKVIDFNPSPR-VLLTFAWKKLTF  265 (327)
Q Consensus       193 ~~~lg~~~v~~~~~--~~-~-~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~  265 (327)
                      ++++|++.++|+++  .+ . .+.+.+.+ ++|++||++|+ +.+..++++++++ |+++.+|.... ....+....+..
T Consensus       232 a~~lGa~~vi~~~~~~~~~~~~i~~~t~g-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~  310 (373)
T 1p0f_A          232 AIELGATECLNPKDYDKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLT  310 (373)
T ss_dssp             HHHTTCSEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHT
T ss_pred             HHHcCCcEEEecccccchHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhcc
Confidence            99999999998874  23 1 23334444 89999999997 4589999999999 99999986542 111222223334


Q ss_pred             cceeeEEEEe-CCCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          266 SKKQLVPFSV-SPKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       266 ~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +. ++.+... ....++++++++++++|+++  +++.++|+++++++||+.+.+++. +|+++++
T Consensus       311 ~~-~i~g~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          311 GR-SLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             TC-EEEECSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             Cc-eEEeeccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            45 6666332 22347899999999999987  467889999999999999988775 7999875

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=3.5e-53  Score=378.65  Aligned_cols=317  Identities=21%  Similarity=0.252  Sum_probs=261.4

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCC--CCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCC---------eeecc
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPN--KDEALLKVEAASINPIDWKLQKGMLRPFLPRKFP---------FIPAS   72 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~--~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p---------~~~G~   72 (327)
                      |++|||++++++|++++.+++++.+.|+|.  ++||+|||.++|||++|++++.|.++..  ..+|         .++||
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~~~P~~~~~~~p~~i~G~   78 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK--PAKTTGFGTTEPAAPCGN   78 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCC--CCCBSTTCCSSCBEECCS
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCC--CCCCccccccCcccccCc
Confidence            568999999998864466889998888876  9999999999999999999999876421  1456         89999


Q ss_pred             cceEEEEecCCCCCCCCCCCEEEEEc-cCcccceeEeecCCceeeCCC-----------CCChhhhcccCchHHHHHHHH
Q 020314           73 DVAGEVIGLGSEVKNFKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQ-----------EVSAAEGAGIPCAGLTAHQAL  140 (327)
Q Consensus        73 e~~G~V~~vG~~~~~~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~-----------~~~~~~aa~~~~~~~ta~~al  140 (327)
                      |++|+|+++|+++++|++||||++.. .+|+|+||++++++.++++|+           ++++++||+++++++|||+++
T Consensus        79 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l  158 (364)
T 1gu7_A           79 EGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLML  158 (364)
T ss_dssp             CCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHH
T ss_pred             eeEEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHH
Confidence            99999999999999999999999864 469999999999999999998           899999999999999999999


Q ss_pred             HHhhCCccCCCCCC-CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-Cc----HHHHHhcCCCEEEeCCC---CCc--
Q 020314          141 TQSLGVKLDGSGQQ-KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RN----IELVKSLGADEVLDYKT---PDG--  209 (327)
Q Consensus       141 ~~~~~~~~~~~~~~-~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~----~~~~~~lg~~~v~~~~~---~~~--  209 (327)
                      .+..++     ++| ++|||+|++|++|++++|+|+++|+++++++++ ++    +++++++|++.++++++   .+.  
T Consensus       159 ~~~~~~-----~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~  233 (364)
T 1gu7_A          159 THYVKL-----TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGP  233 (364)
T ss_dssp             HSSSCC-----CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHH
T ss_pred             HHhhcc-----CCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHH
Confidence            776778     899 999999999999999999999999999998853 44    57778999999998764   231  


Q ss_pred             ccccCC--CCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC----CC----H
Q 020314          210 AALKSP--SGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS----PK----G  279 (327)
Q Consensus       210 ~~~~~~--~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~  279 (327)
                      .+.+.+  +++++|++|||+|++....++++++++|+++.+|........+....+.++++++.++...    ..    .
T Consensus       234 ~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  313 (364)
T 1gu7_A          234 TIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKT  313 (364)
T ss_dssp             HHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHH
T ss_pred             HHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccCHHHHH
Confidence            233333  4568999999999877668899999999999998654322222233445566777664321    11    3


Q ss_pred             HHHHHHHHHHHCCceeEecceeeccc---cHHHHHHHHhcCCCCccEEEeC
Q 020314          280 ENLDFLVKLVKEGKLKTVIDSKHSLS---KAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       280 ~~~~~~~~~~~~g~l~~~~~~~~~~~---~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +.++++++++++|++++.+..+++++   ++++||+.+.+++..||+|+++
T Consensus       314 ~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          314 STLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            67899999999999988666777775   9999999999998889999975

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=3.3e-52  Score=372.53  Aligned_cols=314  Identities=21%  Similarity=0.300  Sum_probs=253.1

Q ss_pred             CCCccceEEEEEeccCCCccceEEe-eccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEE
Q 020314            1 MAGKAVMHAVQYDSYGGGVAGLKHV-EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVI   79 (327)
Q Consensus         1 m~~~~~~~a~~~~~~g~~~~~l~~~-~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~   79 (327)
                      |+.|.+|||+++.++++    ++++ +.+.|+|.++||+|||.++|||++|++++.+..      .+|.++|||++|+|+
T Consensus         6 m~~p~~mkA~v~~~~~~----l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~------~~p~v~G~e~~G~V~   75 (371)
T 3gqv_A            6 FIPPPQQTALTVNDHDE----VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFA------TPWAFLGTDYAGTVV   75 (371)
T ss_dssp             CCCCSCEEEEEECTTSC----EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----C------CTTSCCCSEEEEEEE
T ss_pred             CCCchhceeEEEcCCCc----eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcCC------CCCccCccccEEEEE
Confidence            77899999999998765    9998 999999999999999999999999999887632      468999999999999


Q ss_pred             ecCCCCCCCCCCCEEEEEc--------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHh-hCCccC-
Q 020314           80 GLGSEVKNFKVGDKVVAVL--------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQS-LGVKLD-  149 (327)
Q Consensus        80 ~vG~~~~~~~~Gd~V~~~~--------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~-~~~~~~-  149 (327)
                      ++|+++++|++||||++.+        .+|+|+||++++++.++++|+++++++||.+++++.|||+++.+. .++..+ 
T Consensus        76 ~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~  155 (371)
T 3gqv_A           76 AVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPS  155 (371)
T ss_dssp             EECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSS
T ss_pred             EeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCc
Confidence            9999999999999999876        369999999999999999999999999999999999999999776 443110 


Q ss_pred             --CC---CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccE
Q 020314          150 --GS---GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDA  222 (327)
Q Consensus       150 --~~---~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~  222 (327)
                        ..   ++|++|||+|++|++|++++|+|++.|++|+++++++|+++++++|++.++|+++.+.  .+.+.+++ ++|+
T Consensus       156 ~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g-~~d~  234 (371)
T 3gqv_A          156 ADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKN-NLRY  234 (371)
T ss_dssp             CSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTT-CCCE
T ss_pred             cccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccC-CccE
Confidence              11   6899999999889999999999999999999998888999999999999999987662  33444444 5999


Q ss_pred             EEeCCCCC-ccccccccc-CCCcEEEeecCCchh-----HHHH---hhhhccccceeeEEEEe-CCCH-------HHHHH
Q 020314          223 VINCVTGI-PWSTFEPNL-GTTGKVIDFNPSPRV-----LLTF---AWKKLTFSKKQLVPFSV-SPKG-------ENLDF  284 (327)
Q Consensus       223 v~d~~g~~-~~~~~~~~l-~~~G~~v~~g~~~~~-----~~~~---~~~~~~~~~~~~~~~~~-~~~~-------~~~~~  284 (327)
                      +|||+|++ .+..+++++ +++|+++.+|.....     ....   ....+..+++++.+... ...+       +.+++
T Consensus       235 v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~  314 (371)
T 3gqv_A          235 ALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRI  314 (371)
T ss_dssp             EEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHH
T ss_pred             EEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHH
Confidence            99999985 488999999 599999999854321     0100   11233445555554321 1222       23458


Q ss_pred             HHHHHHCCceeEe--cceeeccccHHHHHHHHhcCCCCccEEE
Q 020314          285 LVKLVKEGKLKTV--IDSKHSLSKAEDAWAKSISGRATGKIIV  325 (327)
Q Consensus       285 ~~~~~~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv  325 (327)
                      +++++++|+|++.  +.+.|+++++++||+.+.+++..||.|+
T Consensus       315 ~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvv  357 (371)
T 3gqv_A          315 AGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLV  357 (371)
T ss_dssp             HHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEE
T ss_pred             HHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEE
Confidence            8899999998764  4455999999999999999999886554

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=7.5e-53  Score=376.24  Aligned_cols=309  Identities=18%  Similarity=0.175  Sum_probs=257.7

Q ss_pred             CCccceEEEEEeccCCCccceEEeeccCC--------CCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeeccc
Q 020314            2 AGKAVMHAVQYDSYGGGVAGLKHVEVPVP--------TPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASD   73 (327)
Q Consensus         2 ~~~~~~~a~~~~~~g~~~~~l~~~~~~~~--------~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e   73 (327)
                      +.|++|||+++.+++.    +++++.+.|        +|.++||+|||.++|||++|++++.+......+..+|.++|||
T Consensus         4 ~~~~~mka~~~~~~~~----l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E   79 (363)
T 3m6i_A            4 SASKTNIGVFTNPQHD----LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHE   79 (363)
T ss_dssp             -CCSCCEEEEECTTCC----EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCE
T ss_pred             CCcccceeEEEeCCCc----EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcc
Confidence            4788999999986554    999999999        9999999999999999999999887442211123679999999


Q ss_pred             ceEEEEecCCCCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhh
Q 020314           74 VAGEVIGLGSEVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAE  125 (327)
Q Consensus        74 ~~G~V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~  125 (327)
                      ++|+|+++|+++++|++||||++.+                            .+|+|+||++++++.++++|+ +++++
T Consensus        80 ~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~  158 (363)
T 3m6i_A           80 SAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYEN  158 (363)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHH
T ss_pred             eEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHH
Confidence            9999999999999999999999752                            579999999999999999999 99999


Q ss_pred             hcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEe-cCCcHHHHHhcCCCEEEe
Q 020314          126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH-VTATC-GARNIELVKSLGADEVLD  203 (327)
Q Consensus       126 aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~-~~~~~~~~~~lg~~~v~~  203 (327)
                      ||.+ .++.|||+++ +..++     ++|++|||+|+ |++|++++|+|+++|++ |++++ +++|+++++++ ++.+++
T Consensus       159 aa~~-~~~~ta~~~l-~~~~~-----~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~  229 (363)
T 3m6i_A          159 GAML-EPLSVALAGL-QRAGV-----RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVT  229 (363)
T ss_dssp             HHHH-HHHHHHHHHH-HHHTC-----CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEE
T ss_pred             HHhh-hHHHHHHHHH-HHcCC-----CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhccc
Confidence            9988 5778999999 78888     89999999996 99999999999999996 88887 45788999999 665555


Q ss_pred             CCC-----CC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe
Q 020314          204 YKT-----PD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV  275 (327)
Q Consensus       204 ~~~-----~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (327)
                      +.-     .+  ..+.+.++++++|++||++|++ .+..++++++++|+++.+|..... ..+....+.++++++.+...
T Consensus       230 ~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~  308 (363)
T 3m6i_A          230 HKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNE-IQIPFMRASVREVDLQFQYR  308 (363)
T ss_dssp             EECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSC-CCCCHHHHHHHTCEEEECCS
T ss_pred             ccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCC-ccccHHHHHhcCcEEEEccC
Confidence            431     11  2344556778999999999987 589999999999999999865432 22334456677777777433


Q ss_pred             CCCHHHHHHHHHHHHCCce--eEecceeeccccHHHHHHHHhcC-CCCccEEEeC
Q 020314          276 SPKGENLDFLVKLVKEGKL--KTVIDSKHSLSKAEDAWAKSISG-RATGKIIVEP  327 (327)
Q Consensus       276 ~~~~~~~~~~~~~~~~g~l--~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvv~~  327 (327)
                      .  .++++++++++++|++  +++++++|+++++++||+.+.++ ...+|+|++.
T Consensus       309 ~--~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~  361 (363)
T 3m6i_A          309 Y--CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQS  361 (363)
T ss_dssp             C--SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEEC
T ss_pred             C--HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEec
Confidence            3  6789999999999998  45677999999999999999998 5678999864

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.8e-52  Score=372.34  Aligned_cols=309  Identities=18%  Similarity=0.182  Sum_probs=259.0

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHH-HHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWK-LQKGMLRPFLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      .|++|||+++.+++++   +++++.+.|+|.++||+|||.++|||++|++ .+.|.++    ..+|.++|||++|+|+++
T Consensus         5 ~~~~mka~~~~~~~~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~P~v~GhE~~G~V~~v   77 (374)
T 1cdo_A            5 KVIKCKAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK----DGFPVVLGHEGAGIVESV   77 (374)
T ss_dssp             SCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT----TSCSEECCCCEEEEEEEE
T ss_pred             CcceeEEEEEecCCCC---eEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC----CCCCcccCccceEEEEEE
Confidence            6899999999988754   8899999999999999999999999999999 8888753    357999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCc
Q 020314           82 GSEVKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESL  113 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~  113 (327)
                      |+++++|++||||++..                                                .+|+|+||++++++.
T Consensus        78 G~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  157 (374)
T 1cdo_A           78 GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIA  157 (374)
T ss_dssp             CTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGG
T ss_pred             CCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhh
Confidence            99999999999998752                                                138999999999999


Q ss_pred             eeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHH
Q 020314          114 TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIE  191 (327)
Q Consensus       114 ~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~  191 (327)
                      ++++|+++++++||.+++++.|||+++.+..++     ++|++|||+| +|++|++++|+|+++|+ +|++++ ++++++
T Consensus       158 ~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~-----~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~  231 (374)
T 1cdo_A          158 VAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKV-----EPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFE  231 (374)
T ss_dssp             EEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             eEECCCCCCHHHHhhhccHHHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence            999999999999999999999999999777888     8999999999 59999999999999999 899988 557899


Q ss_pred             HHHhcCCCEEEeCCC--CC-c-ccccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCchhHHHHhhhhccc
Q 020314          192 LVKSLGADEVLDYKT--PD-G-AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPRVLLTFAWKKLTF  265 (327)
Q Consensus       192 ~~~~lg~~~v~~~~~--~~-~-~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~  265 (327)
                      +++++|++.++|+++  .+ . .+.+.+.+ ++|++||++|.+ .+..++++++++ |+++.+|........+....+..
T Consensus       232 ~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~  310 (374)
T 1cdo_A          232 KAKVFGATDFVNPNDHSEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIA  310 (374)
T ss_dssp             HHHHTTCCEEECGGGCSSCHHHHHHHHHTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHT
T ss_pred             HHHHhCCceEEeccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhc
Confidence            999999999998764  22 1 22233343 899999999974 588999999999 99999986543111222223334


Q ss_pred             cceeeEEEEeC--CCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          266 SKKQLVPFSVS--PKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       266 ~~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +. ++.+....  ...++++++++++++|+++  +++.++|+++++++||+.+.+++. +|+|+++
T Consensus       311 ~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          311 GR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             TC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CC-eEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence            55 66663221  1357899999999999987  467889999999999999998875 7999875

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=9.6e-53  Score=375.73  Aligned_cols=306  Identities=22%  Similarity=0.299  Sum_probs=260.9

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      +|++|||++++++++    +++++.+.|+|.++||+|||.++|||++|++++.|.++    ..+|.++|||++|+|+++|
T Consensus        20 ~p~~mkA~v~~~~~~----l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~----~~~p~v~G~e~~G~V~~vG   91 (370)
T 4ej6_A           20 FQSMMKAVRLESVGN----ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP----STPPVTLGHEFCGIVVEAG   91 (370)
T ss_dssp             -CCEEEEEEEEETTE----EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSEECCCSEEEEEEEEC
T ss_pred             cchheEEEEEecCCc----eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC----CCCCeecCcceEEEEEEEC
Confidence            588999999998764    99999999999999999999999999999999999863    4679999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHH
Q 020314           83 SEVKNFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLT  135 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t  135 (327)
                      +++++|++||||++.+                           .+|+|+||++++++.++++|+++++++|| +..++.|
T Consensus        92 ~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~t  170 (370)
T 4ej6_A           92 SAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLAC  170 (370)
T ss_dssp             TTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHH
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHH
Confidence            9999999999998732                           46999999999999999999999999998 6678899


Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCCCCc--cc
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKTPDG--AA  211 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~--~~  211 (327)
                      ||+++ +..++     ++|++|||+|+ |++|++++|+|+++|+ +|+++++ ++++++++++|++.++|+++.+.  .+
T Consensus       171 a~~~l-~~~~~-----~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i  243 (370)
T 4ej6_A          171 CLHGV-DLSGI-----KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAI  243 (370)
T ss_dssp             HHHHH-HHHTC-----CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHH
T ss_pred             HHHHH-HhcCC-----CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHH
Confidence            99999 78888     89999999995 9999999999999999 8888875 47888999999999999877662  22


Q ss_pred             cc---CCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchh-HHHHhhhhccccceeeEEEEeCCCHHHHHHHH
Q 020314          212 LK---SPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRV-LLTFAWKKLTFSKKQLVPFSVSPKGENLDFLV  286 (327)
Q Consensus       212 ~~---~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (327)
                      .+   .+.+ ++|++|||+|+. .+..++++++++|+++.+|..... ...+....+.++++++.+.+.  ....+++++
T Consensus       244 ~~~~~~~~g-g~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~  320 (370)
T 4ej6_A          244 AGPVGLVPG-GVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFI--NPFVHRRAA  320 (370)
T ss_dssp             HSTTSSSTT-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCS--CTTCHHHHH
T ss_pred             HhhhhccCC-CCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEecc--ChHHHHHHH
Confidence            33   4444 899999999964 589999999999999999865431 233445566778888887543  235689999


Q ss_pred             HHHHCCcee--EecceeeccccHHHHHHHHhcCCC-CccEEEeC
Q 020314          287 KLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRA-TGKIIVEP  327 (327)
Q Consensus       287 ~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~~  327 (327)
                      +++++|+++  ++++++|+++++++|++.+.+++. .+|+++++
T Consensus       321 ~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~  364 (370)
T 4ej6_A          321 DLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSA  364 (370)
T ss_dssp             HHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC-
T ss_pred             HHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcc
Confidence            999999985  568899999999999999988774 47877653

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=8.7e-53  Score=385.62  Aligned_cols=319  Identities=26%  Similarity=0.296  Sum_probs=265.1

Q ss_pred             CCccceEEEEEeccC----------CCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHh-------------cCC
Q 020314            2 AGKAVMHAVQYDSYG----------GGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQK-------------GML   58 (327)
Q Consensus         2 ~~~~~~~a~~~~~~g----------~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~-------------g~~   58 (327)
                      .+|.+|||+++.+++          .+++.+++++.+.|+|.++||+|||.++|||++|++...             +..
T Consensus        20 ~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~   99 (447)
T 4a0s_A           20 PVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQ   99 (447)
T ss_dssp             CCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTT
T ss_pred             CCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhccc
Confidence            368999999999987          234569999999999999999999999999999986432             111


Q ss_pred             CCC-CCCCCC-eeecccceEEEEecCCCCCCCCCCCEEEEEcc---------------------------CcccceeEee
Q 020314           59 RPF-LPRKFP-FIPASDVAGEVIGLGSEVKNFKVGDKVVAVLS---------------------------GGGLAEFAVA  109 (327)
Q Consensus        59 ~~~-~~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~---------------------------~g~~a~~~~~  109 (327)
                      ... ....+| .++|||++|+|+++|+++++|++||||++.+.                           +|+|+||+++
T Consensus       100 g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v  179 (447)
T 4a0s_A          100 GGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVV  179 (447)
T ss_dssp             CGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEE
T ss_pred             CccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeec
Confidence            110 012466 69999999999999999999999999998541                           5999999999


Q ss_pred             cCCceeeCCCCCChhhhcccCchHHHHHHHHHHh--hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-
Q 020314          110 KESLTVARPQEVSAAEGAGIPCAGLTAHQALTQS--LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-  186 (327)
Q Consensus       110 ~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~--~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-  186 (327)
                      ++++++++|+++++++||+++++++|||+++.+.  .++     ++|++|||+|++|++|++++|+|++.|++|+++++ 
T Consensus       180 ~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~-----~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~  254 (447)
T 4a0s_A          180 RASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQM-----KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS  254 (447)
T ss_dssp             EGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCC-----CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCC-----CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            9999999999999999999999999999999643  677     89999999998899999999999999999998874 


Q ss_pred             CCcHHHHHhcCCCEEEeCCCCC--------------------cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEE
Q 020314          187 ARNIELVKSLGADEVLDYKTPD--------------------GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVI  246 (327)
Q Consensus       187 ~~~~~~~~~lg~~~v~~~~~~~--------------------~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v  246 (327)
                      ++++++++++|++.++++.+.+                    ..+.+.+ ++++|++||++|++.+..++++++++|+++
T Consensus       255 ~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv  333 (447)
T 4a0s_A          255 AQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGRVTFGLSVIVARRGGTVV  333 (447)
T ss_dssp             HHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCHHHHHHHHHHSCTTCEEE
T ss_pred             HHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHh-CCCceEEEECCCchHHHHHHHHHhcCCEEE
Confidence            4788899999999998865432                    1122233 678999999999977889999999999999


Q ss_pred             eecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEe
Q 020314          247 DFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVE  326 (327)
Q Consensus       247 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  326 (327)
                      .+|...+....+....+.++.+++.+ +.....+++.++++++++|+++++++++|+++++++||+.+.+++..||+|+.
T Consensus       334 ~~G~~~~~~~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~  412 (447)
T 4a0s_A          334 TCGSSSGYLHTFDNRYLWMKLKKIVG-SHGANHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVL  412 (447)
T ss_dssp             ESCCTTCSEEEEEHHHHHHTTCEEEE-CCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEE
T ss_pred             EEecCCCcccccCHHHHHhCCCEEEe-cCCCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceEEEEE
Confidence            99965433223333445566777777 34456677889999999999999999999999999999999999999999885


Q ss_pred             C
Q 020314          327 P  327 (327)
Q Consensus       327 ~  327 (327)
                      +
T Consensus       413 ~  413 (447)
T 4a0s_A          413 C  413 (447)
T ss_dssp             S
T ss_pred             e
Confidence            3

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=8.4e-52  Score=367.39  Aligned_cols=305  Identities=20%  Similarity=0.239  Sum_probs=256.9

Q ss_pred             eEEEEEeccCCCccceEEeeccCCC-CCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPT-PNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~-~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      |||+++.++|.    +++++.|.|+ +.||||||||.++|||++|++.+.|..+    ..+|.++|||++|+|+++|+++
T Consensus         1 MkAvv~~~~g~----l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~----~~~P~i~G~E~~G~V~~vG~~V   72 (346)
T 4a2c_A            1 MKSVVNDTDGI----VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA----HYYPITLGHEFSGYIDAVGSGV   72 (346)
T ss_dssp             CEEEEECSSSC----EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS----SSSSBCCCCEEEEEEEEECTTC
T ss_pred             CCEEEEecCCC----EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC----CCCCccccEEEEEEEEEECCCc
Confidence            89999998876    9999999998 5799999999999999999999988764    3689999999999999999999


Q ss_pred             CCCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           86 KNFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        86 ~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      +++++||||++..                           .+|+|+||+++++++++++|+++++++||+++ +++++++
T Consensus        73 ~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~  151 (346)
T 4a2c_A           73 DDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLH  151 (346)
T ss_dssp             CSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHH
T ss_pred             ccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHH
Confidence            9999999998743                           46999999999999999999999999999775 4455555


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeE-EEEec-CCcHHHHHhcCCCEEEeCCCCCc--ccccC
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV-TATCG-ARNIELVKSLGADEVLDYKTPDG--AALKS  214 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v-~~~~~-~~~~~~~~~lg~~~v~~~~~~~~--~~~~~  214 (327)
                      ++ +..++     ++|++|||+| +|++|++++|+|+++|+++ +++++ ++|+++++++|++.++|+++.+.  .....
T Consensus       152 ~~-~~~~~-----~~g~~VlV~G-aG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~  224 (346)
T 4a2c_A          152 AF-HLAQG-----CENKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVL  224 (346)
T ss_dssp             HH-HHTTC-----CTTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred             HH-HHhcc-----CCCCEEEEEC-CCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhh
Confidence            55 77777     8999999998 5999999999999999965 45554 47889999999999999988762  23344


Q ss_pred             CCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchh--HHHHhhhhccccceeeEEEEeC----CCHHHHHHHHH
Q 020314          215 PSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRV--LLTFAWKKLTFSKKQLVPFSVS----PKGENLDFLVK  287 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  287 (327)
                      ++++++|+++|++|.+. ++.++++++++|+++.+|.....  ........+..+++++.+.+..    ...++++++++
T Consensus       225 ~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~  304 (346)
T 4a2c_A          225 RELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASR  304 (346)
T ss_dssp             GGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHH
T ss_pred             cccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHH
Confidence            56788999999999764 88999999999999999865432  1233444556677777774321    23578999999


Q ss_pred             HHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          288 LVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       288 ~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++|+++  ++++++|+|+++++||+.+.+++..||+||.|
T Consensus       305 l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          305 LLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             HHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             HHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            99999975  56889999999999999999999999999976

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5e-52  Score=369.31  Aligned_cols=307  Identities=21%  Similarity=0.277  Sum_probs=256.2

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhc-CCCCCCCCCCCeeecccceEEEEecCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKG-MLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g-~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      ++|||+++++++.    +++++.+.|+|.++||+|||.++|||++|++.+.+ .++.. ...+|.++|||++|+|+++|+
T Consensus         3 ~~mka~~~~~~~~----l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~-~~~~p~v~G~E~~G~V~~vG~   77 (352)
T 1e3j_A            3 SDNLSAVLYKQND----LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADF-IVKDPMVIGHEASGTVVKVGK   77 (352)
T ss_dssp             -CCEEEEEEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSC-BCCSCEECCCEEEEEEEEECT
T ss_pred             ccCEEEEEEcCCc----EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccc-cCCCCccccccceEEEEEeCC
Confidence            4699999998653    89999999999999999999999999999998874 33211 125789999999999999999


Q ss_pred             CCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHH
Q 020314           84 EVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLT  135 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t  135 (327)
                      ++++|++||||++.+                            .+|+|+||+++++++++++|+++++++||.+ .++.|
T Consensus        78 ~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~t  156 (352)
T 1e3j_A           78 NVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSV  156 (352)
T ss_dssp             TCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHH
T ss_pred             CCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHH
Confidence            999999999998752                            3699999999999999999999999999865 57789


Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCC-CC-c-cc
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKT-PD-G-AA  211 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~-~~-~-~~  211 (327)
                      ||+++ +..++     ++|++|||+| +|++|++++|+|+++|++|+++++ ++++++++++|++.++++++ .+ . .+
T Consensus       157 a~~al-~~~~~-----~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i  229 (352)
T 1e3j_A          157 GVHAC-RRAGV-----QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSI  229 (352)
T ss_dssp             HHHHH-HHHTC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHH
T ss_pred             HHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHH
Confidence            99999 77888     8999999999 499999999999999999888884 47888999999999998874 33 2 23


Q ss_pred             ccCCC---CCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHH
Q 020314          212 LKSPS---GRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVK  287 (327)
Q Consensus       212 ~~~~~---~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (327)
                      .+.+.   ++++|++||++|++ .+..++++++++|+++.+|..... ..+....+.++++++.+....  .++++++++
T Consensus       230 ~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~--~~~~~~~~~  306 (352)
T 1e3j_A          230 IERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQM-VTVPLVNACAREIDIKSVFRY--CNDYPIALE  306 (352)
T ss_dssp             HHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSC-CCCCHHHHHTTTCEEEECCSC--SSCHHHHHH
T ss_pred             HHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-ccccHHHHHhcCcEEEEeccc--hHHHHHHHH
Confidence            33333   56899999999986 488999999999999999864321 223345566778888774322  467999999


Q ss_pred             HHHCCcee--EecceeeccccHHHHHHHHhcCC-CCccEEEeC
Q 020314          288 LVKEGKLK--TVIDSKHSLSKAEDAWAKSISGR-ATGKIIVEP  327 (327)
Q Consensus       288 ~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~~  327 (327)
                      ++++|+++  ++++++|+++++++||+.+.+++ ..||+|+++
T Consensus       307 l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~  349 (352)
T 1e3j_A          307 MVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISC  349 (352)
T ss_dssp             HHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             HHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEec
Confidence            99999964  56778999999999999999988 689999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=1.2e-51  Score=369.75  Aligned_cols=309  Identities=17%  Similarity=0.167  Sum_probs=259.1

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .|++|||+++.+++++   +++++.+.|+|.++||+|||.++|||++|++++.|.++    ..+|.++|||++|+|+++|
T Consensus         5 ~~~~mkA~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG   77 (374)
T 2jhf_A            5 KVIKCKAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVESIG   77 (374)
T ss_dssp             SCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEEEC
T ss_pred             CceeEEEEEEecCCCc---eEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCC----CCCCcccCcCceEEEEEEC
Confidence            5889999999988754   88999999999999999999999999999999998753    2378999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCce
Q 020314           83 SEVKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLT  114 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~  114 (327)
                      +++++|++||||++.+                                                ..|+|+||++++++.+
T Consensus        78 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  157 (374)
T 2jhf_A           78 EGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISV  157 (374)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHe
Confidence            9999999999998752                                                1389999999999999


Q ss_pred             eeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHH
Q 020314          115 VARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIEL  192 (327)
Q Consensus       115 ~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~  192 (327)
                      +++|+++++++||.+++++.|||+++.+..++     ++|++|||+| +|++|++++|+|+++|+ +|++++ +++++++
T Consensus       158 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~-----~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~  231 (374)
T 2jhf_A          158 AKIDAASPLEKVCLIGCGFSTGYGSAVKVAKV-----TQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAK  231 (374)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTTCC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             EECCCCCCHHHhhhhccHHHHHHHHHHhccCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            99999999999999999999999999778888     8999999999 69999999999999999 899988 5578999


Q ss_pred             HHhcCCCEEEeCCC--CC-c-ccccCCCCCcccEEEeCCCCC-cccccccccCCC-cEEEeecCCch-hHHHHhhhhccc
Q 020314          193 VKSLGADEVLDYKT--PD-G-AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTT-GKVIDFNPSPR-VLLTFAWKKLTF  265 (327)
Q Consensus       193 ~~~lg~~~v~~~~~--~~-~-~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~  265 (327)
                      ++++|++.++|+++  .+ . .+.+.+.+ ++|++||++|.+ .+..++++++++ |+++.+|.... ....+....+..
T Consensus       232 ~~~lGa~~vi~~~~~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~  310 (374)
T 2jhf_A          232 AKEVGATECVNPQDYKKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLS  310 (374)
T ss_dssp             HHHTTCSEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHT
T ss_pred             HHHhCCceEecccccchhHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhc
Confidence            99999999998764  22 1 23333444 899999999974 588999999999 99999986542 111222233344


Q ss_pred             cceeeEEEEeC--CCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          266 SKKQLVPFSVS--PKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       266 ~~~~~~~~~~~--~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +. ++.+.+..  ...++++++++++++|+++  ++++++|+++++++||+.+.+++. +|+++++
T Consensus       311 ~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          311 GR-TWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             TC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CC-eEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            55 66663321  1357899999999999987  467889999999999999998775 7999875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.5e-51  Score=365.35  Aligned_cols=306  Identities=18%  Similarity=0.281  Sum_probs=255.6

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      .++||++++.++++   .+++++.+.|+|.++||+|||.++|||++|++++.|.++.   ..+|.++|||++|+|+++|+
T Consensus        20 ~~~~~a~~~~~~~~---~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~   93 (369)
T 1uuf_A           20 GLKIKAVGAYSAKQ---PLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG---TVYPCVPGHEIVGRVVAVGD   93 (369)
T ss_dssp             ---CEEEEBSSTTS---CCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC---CCSSBCCCCCEEEEEEEECT
T ss_pred             CceEEEEEEcCCCC---CcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCC---CCCCeecccCceEEEEEECC
Confidence            57899999876544   4999999999999999999999999999999999987542   25789999999999999999


Q ss_pred             CCCCCCCCCEEEEE------------------------------------ccCcccceeEeecCCceeeCCCC-CChhhh
Q 020314           84 EVKNFKVGDKVVAV------------------------------------LSGGGLAEFAVAKESLTVARPQE-VSAAEG  126 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~------------------------------------~~~g~~a~~~~~~~~~~~~ip~~-~~~~~a  126 (327)
                      ++++|++||||++.                                    ..+|+|+||++++++.++++|++ +++++|
T Consensus        94 ~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~a  173 (369)
T 1uuf_A           94 QVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAV  173 (369)
T ss_dssp             TCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHH
T ss_pred             CCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHh
Confidence            99999999999852                                    13589999999999999999999 999999


Q ss_pred             cccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeCC
Q 020314          127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDYK  205 (327)
Q Consensus       127 a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~~  205 (327)
                      |.+++++.|||+++.+ .++     ++|++|||+|+ |++|++++|+|+.+|++|++++ +++++++++++|++.++++.
T Consensus       174 a~l~~~~~tA~~al~~-~~~-----~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~  246 (369)
T 1uuf_A          174 APLLCAGITTYSPLRH-WQA-----GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSR  246 (369)
T ss_dssp             GGGGTHHHHHHHHHHH-TTC-----CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETT
T ss_pred             hhhhhhHHHHHHHHHh-cCC-----CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccc
Confidence            9999999999999965 577     89999999995 9999999999999999999988 55789999999999999887


Q ss_pred             CCCcccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHH
Q 020314          206 TPDGAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF  284 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (327)
                      +.+.  .+... +++|++||++|++ .+..++++++++|+++.+|........+....+..+++++.+. .....+++++
T Consensus       247 ~~~~--~~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~-~~~~~~~~~~  322 (369)
T 1uuf_A          247 NADE--MAAHL-KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGS-MIGGIPETQE  322 (369)
T ss_dssp             CHHH--HHTTT-TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEEC-CSCCHHHHHH
T ss_pred             cHHH--HHHhh-cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEe-ecCCHHHHHH
Confidence            5431  11111 5799999999976 5889999999999999999765332133344556677777773 3445788999


Q ss_pred             HHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          285 LVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       285 ~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++++|++++.+ ++|+++++++|++.+.+++..||+|+.+
T Consensus       323 ~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          323 MLDFCAEHGIVADI-EMIRADQINEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             HHHHHHHHTCCCCE-EEECGGGHHHHHHHHHTTCSSSEEEEEG
T ss_pred             HHHHHHhCCCCcce-EEEcHHHHHHHHHHHHcCCCceEEEEec
Confidence            99999999998766 4799999999999999998889999864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=3.7e-51  Score=362.97  Aligned_cols=308  Identities=26%  Similarity=0.366  Sum_probs=262.2

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCC-----CCCCCCCeeecccceEEEEec
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP-----FLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~-----~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      |||+++++++++   +++++.+.|+|.++||+|||.++|||++|++++.|.++.     .....+|.++|||++|+|+++
T Consensus         1 Mka~~~~~~g~~---l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   77 (347)
T 1jvb_A            1 MRAVRLVEIGKP---LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV   77 (347)
T ss_dssp             CEEEEECSTTSC---CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred             CeEEEEecCCCC---eEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEE
Confidence            799999988754   899999999999999999999999999999999886541     001357999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEc---------------------------cCcccceeEeecC-CceeeCCCCCChhhhcccCchH
Q 020314           82 GSEVKNFKVGDKVVAVL---------------------------SGGGLAEFAVAKE-SLTVARPQEVSAAEGAGIPCAG  133 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~-~~~~~ip~~~~~~~aa~~~~~~  133 (327)
                      |+++++|++||||++..                           .+|+|+||+++++ +.++++ +++++++||.+++++
T Consensus        78 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~  156 (347)
T 1jvb_A           78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSG  156 (347)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHH
T ss_pred             CCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhH
Confidence            99999999999997643                           3599999999999 999999 999999999999999


Q ss_pred             HHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCc--
Q 020314          134 LTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVKSLGADEVLDYKTPDG--  209 (327)
Q Consensus       134 ~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~--  209 (327)
                      .|||+++. ..++     +++++|||+|++|++|++++|+++.. |++|+++++ +++++.++++|++.++++.+.+.  
T Consensus       157 ~ta~~~l~-~~~~-----~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  230 (347)
T 1jvb_A          157 ITTYRAVR-KASL-----DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLA  230 (347)
T ss_dssp             HHHHHHHH-HTTC-----CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHH
T ss_pred             HHHHHHHH-hcCC-----CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHH
Confidence            99999994 5777     89999999998889999999999999 999999985 46788889999999998876542  


Q ss_pred             ccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCc-hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHH
Q 020314          210 AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVK  287 (327)
Q Consensus       210 ~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (327)
                      .+.+.+..+++|++||++|++ .+..++++++++|+++.+|... ..  .+....+..+++++.+ +.....++++++++
T Consensus       231 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~  307 (347)
T 1jvb_A          231 EIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL--HYHAPLITLSEIQFVG-SLVGNQSDFLGIMR  307 (347)
T ss_dssp             HHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC--CCCHHHHHHHTCEEEE-CCSCCHHHHHHHHH
T ss_pred             HHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC--CCCHHHHHhCceEEEE-EeccCHHHHHHHHH
Confidence            122223314899999999987 6899999999999999998654 22  2333345567777777 33446788999999


Q ss_pred             HHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          288 LVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       288 ~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++|++++.++++|+++++++|++.+.+++..||+|+++
T Consensus       308 l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          308 LAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             HHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            9999999988889999999999999999999889999975

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=2.7e-51  Score=362.63  Aligned_cols=304  Identities=25%  Similarity=0.353  Sum_probs=259.0

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++++++++   +++++.+.|+|.++||+|||.++|||++|++.+.|.++.  ...+|.++|||++|+|+++|++++
T Consensus         1 Mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~GhE~~G~V~~vG~~v~   75 (339)
T 1rjw_A            1 MKAAVVEQFKEP---LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPV--KPKLPLIPGHEGVGIVEEVGPGVT   75 (339)
T ss_dssp             CEEEEBSSTTSC---CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CeEEEEcCCCCC---cEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCc--CCCCCeeccccceEEEEEECCCCC
Confidence            799999988743   899999999999999999999999999999999987641  125789999999999999999999


Q ss_pred             CCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           87 NFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        87 ~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      +|++||||++.+                            .+|+|+||++++++.++++|+++++++||.+++++.|||+
T Consensus        76 ~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  155 (339)
T 1rjw_A           76 HLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYK  155 (339)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHH
T ss_pred             cCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHH
Confidence            999999998631                            3689999999999999999999999999999999999999


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCc--ccccCC
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDG--AALKSP  215 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~--~~~~~~  215 (327)
                      ++.+. ++     ++|++|||+|+ |++|++++|+|+..|++|+++++ ++++++++++|++.++|+++.+.  .+.+.+
T Consensus       156 ~l~~~-~~-----~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~  228 (339)
T 1rjw_A          156 ALKVT-GA-----KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKV  228 (339)
T ss_dssp             HHHHH-TC-----CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHH
T ss_pred             HHHhc-CC-----CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHh
Confidence            99554 77     89999999997 88999999999999999999985 47888899999999998876542  222223


Q ss_pred             CCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314          216 SGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL  294 (327)
Q Consensus       216 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  294 (327)
                        +++|++||++|. ..+..++++++++|+++.+|..... ..+....+..+++++.+ +.....++++++++++++|++
T Consensus       229 --~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~l~~~g~l  304 (339)
T 1rjw_A          229 --GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE-MPIPIFDTVLNGIKIIG-SIVGTRKDLQEALQFAAEGKV  304 (339)
T ss_dssp             --SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE-EEEEHHHHHHTTCEEEE-CCSCCHHHHHHHHHHHHTTSC
T ss_pred             --CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC-CccCHHHHHhCCcEEEE-eccCCHHHHHHHHHHHHcCCC
Confidence              479999999997 5588999999999999999865432 22233344567777776 334467889999999999999


Q ss_pred             eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          295 KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       295 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++. .++|+++++++|++.+.+++..||+|+++
T Consensus       305 ~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          305 KTI-IEVQPLEKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             CCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             Ccc-EEEEcHHHHHHHHHHHHcCCCceEEEEec
Confidence            875 47899999999999999998889999875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-51  Score=369.90  Aligned_cols=307  Identities=19%  Similarity=0.214  Sum_probs=260.9

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      ..+|||++++++++   .+++++.+.|+|.++||+|||.++|||++|++++.|.++   ...+|.++|||++|+|+++| 
T Consensus        15 ~~~mka~~~~~~g~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~~P~v~GhE~~G~V~~vG-   87 (380)
T 1vj0_A           15 GLKAHAMVLEKFNQ---PLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP---RVPLPIILGHEGAGRVVEVN-   87 (380)
T ss_dssp             CEEEEEEEBCSTTS---CCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEES-
T ss_pred             hhheEEEEEecCCC---CeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCC---CCCCCcccCcCcEEEEEEeC-
Confidence            36799999998873   389999999999999999999999999999999998754   13578999999999999999 


Q ss_pred             CCC------CCCCCCEEEEEc------------------------------------cCcccceeEee-cCCceeeCCCC
Q 020314           84 EVK------NFKVGDKVVAVL------------------------------------SGGGLAEFAVA-KESLTVARPQE  120 (327)
Q Consensus        84 ~~~------~~~~Gd~V~~~~------------------------------------~~g~~a~~~~~-~~~~~~~ip~~  120 (327)
                      +++      +|++||||++.+                                    .+|+|+||+++ +++.++++|++
T Consensus        88 ~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~  167 (380)
T 1vj0_A           88 GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEK  167 (380)
T ss_dssp             SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTT
T ss_pred             CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCC
Confidence            999      999999999741                                    26999999999 99999999999


Q ss_pred             CChh-hhcccCchHHHHHHHHHHhhC-CccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEec-CCcHHHHHhc
Q 020314          121 VSAA-EGAGIPCAGLTAHQALTQSLG-VKLDGSGQQKNILITAASGAVGLYAVQLAKLGN-THVTATCG-ARNIELVKSL  196 (327)
Q Consensus       121 ~~~~-~aa~~~~~~~ta~~al~~~~~-~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~-~~~~~~~~~l  196 (327)
                      ++++ +|++++ ++.|||+++ +..+ +     ++|++|||+| +|++|++++|+|+.+| ++|+++++ ++++++++++
T Consensus       168 l~~~~~Aa~~~-~~~ta~~al-~~~~~~-----~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l  239 (380)
T 1vj0_A          168 DDLDVLAMAMC-SGATAYHAF-DEYPES-----FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI  239 (380)
T ss_dssp             SCHHHHHHHTT-HHHHHHHHH-HTCSSC-----CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT
T ss_pred             CChHHhHhhhc-HHHHHHHHH-HhcCCC-----CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc
Confidence            9999 666666 999999999 5667 7     8999999999 8999999999999999 49999995 5788999999


Q ss_pred             CCCEEEeCC---CCC--cccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCc-hhHHHHhhhh-ccccce
Q 020314          197 GADEVLDYK---TPD--GAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKK-LTFSKK  268 (327)
Q Consensus       197 g~~~v~~~~---~~~--~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~-~~~~~~  268 (327)
                      |++.+++++   +.+  ..+.+.+.+.++|++||++|++ .+..++++++++|+++.+|... +....+.... +..+++
T Consensus       240 Ga~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  319 (380)
T 1vj0_A          240 GADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNA  319 (380)
T ss_dssp             TCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTC
T ss_pred             CCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCe
Confidence            999999886   333  2334445666899999999975 5889999999999999998654 3122333334 567778


Q ss_pred             eeEEEEeCCCHHHHHHHHHHHHC--CceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          269 QLVPFSVSPKGENLDFLVKLVKE--GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~--g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++.+. .....++++++++++++  |+++++++++|+++++++||+.+.+++.. |+|+++
T Consensus       320 ~i~g~-~~~~~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~  378 (380)
T 1vj0_A          320 TFKGI-WVSDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYP  378 (380)
T ss_dssp             EEEEC-CCCCHHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEEC
T ss_pred             EEEEe-ecCCHHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEe
Confidence            88773 33457889999999999  99988888999999999999999998888 999875

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=8.3e-52  Score=368.28  Aligned_cols=306  Identities=20%  Similarity=0.249  Sum_probs=255.6

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCC-CCCCCCCCCeeecccceEEEEecC
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGML-RPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~-~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .++|||+++++++.    +++++.+.|+|.++||+|||.++|||++|++.+.|.. ... ...+|.++|||++|+|+++|
T Consensus         5 ~~~mka~~~~~~~~----l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~~~p~v~G~E~~G~V~~vG   79 (356)
T 1pl8_A            5 KPNNLSLVVHGPGD----LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNF-IVKKPMVLGHEASGTVEKVG   79 (356)
T ss_dssp             CCCCEEEEEEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTE-ECSSCEECCCEEEEEEEEEC
T ss_pred             ccCceEEEEecCCc----EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCc-cCCCCcccccceEEEEEEEC
Confidence            47899999998653    8999999999999999999999999999999887532 111 12578999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHH
Q 020314           83 SEVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGL  134 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  134 (327)
                      +++++|++||||++.+                            .+|+|+||++++++.++++|+++++++||.+ .++.
T Consensus        80 ~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~  158 (356)
T 1pl8_A           80 SSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLS  158 (356)
T ss_dssp             TTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHH
T ss_pred             CCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHH
Confidence            9999999999999752                            3699999999999999999999999999876 5778


Q ss_pred             HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEEEeCCC---CC-
Q 020314          135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEVLDYKT---PD-  208 (327)
Q Consensus       135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v~~~~~---~~-  208 (327)
                      |||+++ +..++     ++|++|||+| +|++|++++|+|+++|+ +|+++++ ++|+++++++|++.+++++.   .+ 
T Consensus       159 ta~~al-~~~~~-----~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~  231 (356)
T 1pl8_A          159 VGIHAC-RRGGV-----TLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEI  231 (356)
T ss_dssp             HHHHHH-HHHTC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHH
T ss_pred             HHHHHH-HhcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchH
Confidence            999999 77788     8999999999 59999999999999999 8999985 47889999999999998872   22 


Q ss_pred             c-ccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHH
Q 020314          209 G-AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLV  286 (327)
Q Consensus       209 ~-~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (327)
                      . .+.+.++ +++|++||++|++ .+..++++++++|+++.+|.... ...+....+.++++++.+....  .+++++++
T Consensus       232 ~~~i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~--~~~~~~~~  307 (356)
T 1pl8_A          232 ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE-MTTVPLLHAAIREVDIKGVFRY--CNTWPVAI  307 (356)
T ss_dssp             HHHHHHHHT-SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS-CCCCCHHHHHHTTCEEEECCSC--SSCHHHHH
T ss_pred             HHHHHHHhC-CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCC-CCccCHHHHHhcceEEEEeccc--HHHHHHHH
Confidence            1 2333333 6899999999986 48899999999999999986432 1223344566777777774322  45789999


Q ss_pred             HHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          287 KLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       287 ~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++|+++  ++++++|+++++++||+.+.++ ..||+|+++
T Consensus       308 ~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~  349 (356)
T 1pl8_A          308 SMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKC  349 (356)
T ss_dssp             HHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEEC
T ss_pred             HHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeC
Confidence            999999975  5777899999999999999988 789999874

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=5.2e-52  Score=366.22  Aligned_cols=314  Identities=24%  Similarity=0.303  Sum_probs=257.3

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      |++|||+++++++. ++.+++++.+.|+|.++||+|||.++|||++|++.+.|.++.  ...+|.++|||++|+|+++  
T Consensus         2 ~~~mka~~~~~~g~-~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~~--   76 (330)
T 1tt7_A            2 STLFQALQAEKNAD-DVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNI--VREYPLILGIDAAGTVVSS--   76 (330)
T ss_dssp             CCEEEEEEECCGGG-SCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTT--CSSCSEECCSEEEEEEEEC--
T ss_pred             CCcceEEEEecCCC-CcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCC--cCCCCccccceEEEEEEEc--
Confidence            46799999998874 456899999999999999999999999999999999887532  1257899999999999996  


Q ss_pred             CCCCCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHH--hhCCccCCCCCCC
Q 020314           84 EVKNFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQ--SLGVKLDGSGQQK  155 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~--~~~~~~~~~~~~~  155 (327)
                      ++++|++||||++..      .+|+|+||++++++.++++|+++++++||++++++.|||+++..  ..++     ++++
T Consensus        77 ~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~-----~~g~  151 (330)
T 1tt7_A           77 NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGL-----SPEK  151 (330)
T ss_dssp             SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTC-----CGGG
T ss_pred             CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCc-----CCCC
Confidence            568899999999863      46999999999999999999999999999999999999988753  3556     7886


Q ss_pred             -eEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccc
Q 020314          156 -NILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWS  233 (327)
Q Consensus       156 -~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~  233 (327)
                       +|||+|++|++|++++|+|+..|++|+++++ ++++++++++|++.++|+++.+....+...+.++|++|||+|++.+.
T Consensus       152 ~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~  231 (330)
T 1tt7_A          152 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLA  231 (330)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTHHHH
T ss_pred             ceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcHHHHH
Confidence             8999999999999999999999999999985 57889999999999998754321222233345899999999997789


Q ss_pred             ccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-CCC----HHHHHHHHHHHHCCceeEecceeeccccHH
Q 020314          234 TFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-SPK----GENLDFLVKLVKEGKLKTVIDSKHSLSKAE  308 (327)
Q Consensus       234 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~  308 (327)
                      .++++++++|+++.+|...+....+....+..+++++.++.. ...    .+.++.+++++++|+++++++++|++++++
T Consensus       232 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~i~~~~~l~~~~  311 (330)
T 1tt7_A          232 SLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTIVDREVSLEETP  311 (330)
T ss_dssp             HHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTSEEEEECSTTHH
T ss_pred             HHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCcccccceEEcHHHHH
Confidence            999999999999999865432222222334556777776422 122    235667777778888888888999999999


Q ss_pred             HHHHHHhcCCCCccEEEeC
Q 020314          309 DAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       309 ~a~~~~~~~~~~gkvvv~~  327 (327)
                      +||+.+.+++..||+|+++
T Consensus       312 ~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          312 GALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HHHHHTTTTCCSSEEEECC
T ss_pred             HHHHHHHcCCCCCeEEEeC
Confidence            9999999998899999875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.8e-51  Score=365.19  Aligned_cols=308  Identities=25%  Similarity=0.286  Sum_probs=257.3

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhc-CCCCCCCCCCCeeecccceEEEEecCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKG-MLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g-~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      ++|||+++.++++   .+++++.+.|+|.++||+|||.++|||++|++.+.| .++.. ...+|.++|||++|+|+++|+
T Consensus         3 ~~mka~~~~~~g~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~~~p~v~G~E~~G~V~~vG~   78 (348)
T 2d8a_A            3 EKMVAIMKTKPGY---GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQS-RIKPPQIMGHEVAGEVVEIGP   78 (348)
T ss_dssp             CEEEEEEECSSSS---SCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHH-HCCSSEECCCEEEEEEEEECT
T ss_pred             CcceEEEEECCCC---CEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcc-cCCCCCccCccceEEEEEECC
Confidence            5699999998873   389999999999999999999999999999999998 43200 125789999999999999999


Q ss_pred             CCCCCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHH
Q 020314           84 EVKNFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTA  136 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  136 (327)
                      +++++++||||++.+                           .+|+|+||++++++.++++|+++++++||+++ ++.||
T Consensus        79 ~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta  157 (348)
T 2d8a_A           79 GVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNA  157 (348)
T ss_dssp             TCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHH
T ss_pred             CCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHH
Confidence            999999999999853                           35999999999999999999999999998875 77899


Q ss_pred             HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCCc--ccc
Q 020314          137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPDG--AAL  212 (327)
Q Consensus       137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~--~~~  212 (327)
                      |+++ +..+     . +|++|||+|+ |++|++++|+|+..|+ +|++++++ +++++++++|++.++++++.+.  .+.
T Consensus       158 ~~~l-~~~~-----~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~  229 (348)
T 2d8a_A          158 VDTV-LAGP-----I-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVM  229 (348)
T ss_dssp             HHHH-TTSC-----C-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHH
T ss_pred             HHHH-HhcC-----C-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHH
Confidence            9999 5443     3 7889999997 9999999999999999 99999854 7888999999999998876552  344


Q ss_pred             cCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhh-hhccccceeeEEEEeCCCHHHHHHHHHHHH
Q 020314          213 KSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAW-KKLTFSKKQLVPFSVSPKGENLDFLVKLVK  290 (327)
Q Consensus       213 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (327)
                      +.+.+.++|++||++|. +.+..++++++++|+++.+|..... ..+.. ..+..+++++.+.......+++++++++++
T Consensus       230 ~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~  308 (348)
T 2d8a_A          230 DITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGK-VTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQ  308 (348)
T ss_dssp             HHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC-CCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHH
T ss_pred             HHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC-cccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHH
Confidence            44566789999999997 5588999999999999999865432 22333 445667777777433223788999999999


Q ss_pred             CCce--eEecceeec-cccHHHHHHHHhcCCCCccEEEeC
Q 020314          291 EGKL--KTVIDSKHS-LSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       291 ~g~l--~~~~~~~~~-~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +|++  +++++++|+ ++++++||+.+.+ +..||+|+++
T Consensus       309 ~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~  347 (348)
T 2d8a_A          309 SGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFML  347 (348)
T ss_dssp             HTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC
T ss_pred             cCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEee
Confidence            9995  467778999 9999999999977 5679999875

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=1.1e-50  Score=361.56  Aligned_cols=314  Identities=26%  Similarity=0.360  Sum_probs=261.5

Q ss_pred             CccceEEEEEeccCCC-ccceEE-eeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEe
Q 020314            3 GKAVMHAVQYDSYGGG-VAGLKH-VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG   80 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~-~~~l~~-~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   80 (327)
                      .|.+|||++++++|++ ++.+++ ++.+.|+|.++||+|||.++|||++|++++.|.++.  ...+|.++|||++|+|++
T Consensus        20 ~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~i~G~E~~G~V~~   97 (362)
T 2c0c_A           20 FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP--SVKPPFDIGFEGIGEVVA   97 (362)
T ss_dssp             HCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCT--TCCSCEECCSEEEEEEEE
T ss_pred             chhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCC--CCCCCCCCCceeEEEEEE
Confidence            3678999999998753 256899 999999999999999999999999999999987642  135789999999999999


Q ss_pred             cCCCCC-CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEE
Q 020314           81 LGSEVK-NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI  159 (327)
Q Consensus        81 vG~~~~-~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV  159 (327)
                      +|++++ +|++||||++. .+|+|+||++++++.++++|+. + .++|+++.++.|||+++.+.+++     ++|++|||
T Consensus        98 vG~~V~~~~~vGdrV~~~-~~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~-----~~g~~VlV  169 (362)
T 2c0c_A           98 LGLSASARYTVGQAVAYM-APGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGL-----SEGKKVLV  169 (362)
T ss_dssp             ECTTGGGTCCTTCEEEEE-CSCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCC-----CTTCEEEE
T ss_pred             ECCCccCCCCCCCEEEEc-cCCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCC-----CCCCEEEE
Confidence            999999 99999999985 4799999999999999999986 4 46778888999999999888888     89999999


Q ss_pred             EcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCCCccccccc
Q 020314          160 TAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTGIPWSTFEP  237 (327)
Q Consensus       160 ~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~  237 (327)
                      +||+|++|++++|+|+..|++|++++++ +++++++++|++.++++++.+. +.+....+.++|++|||+|+..+..+++
T Consensus       170 ~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~  249 (362)
T 2c0c_A          170 TAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVD  249 (362)
T ss_dssp             TTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCTHHHHHHHH
T ss_pred             eCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCHHHHHHHHH
Confidence            9999999999999999999999999865 6888899999999999876552 2222223468999999999877889999


Q ss_pred             ccCCCcEEEeecCCchhHH----------HHhhhhccccceeeEEEEeCC----CHHHHHHHHHHHHCCceeEec-----
Q 020314          238 NLGTTGKVIDFNPSPRVLL----------TFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKLKTVI-----  298 (327)
Q Consensus       238 ~l~~~G~~v~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~-----  298 (327)
                      +++++|+++.+|.......          .+ ...+..++.++.++....    ..+.++++++++++|++++.+     
T Consensus       250 ~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~  328 (362)
T 2c0c_A          250 ALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDL  328 (362)
T ss_dssp             HEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTT
T ss_pred             HHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccc
Confidence            9999999999986532110          11 134455666676643211    256789999999999998653     


Q ss_pred             ---ceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          299 ---DSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       299 ---~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                         .+.++++++++|++.+.+++..||+|+.+
T Consensus       329 ~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          329 SPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             STTCSCBSTTHHHHHHHHHHTTCCSBEEEEEC
T ss_pred             cccccccCHHHHHHHHHHHHcCCCCceEEEEc
Confidence               35689999999999999988899999874

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.8e-51  Score=359.22  Aligned_cols=311  Identities=21%  Similarity=0.275  Sum_probs=251.2

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      ++|||+++++++. ++.+++++.+.|+|.++||+|||.++|||++|++.+.|.++.  ...+|.++|||++|+|++.  +
T Consensus         2 ~~mka~~~~~~g~-~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~v~G~E~~G~V~~~--~   76 (328)
T 1xa0_A            2 SAFQAFVVNKTET-EFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKI--VKTYPFVPGIDLAGVVVSS--Q   76 (328)
T ss_dssp             CEEEEEEEEEETT-EEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSS--CCSSSBCCCSEEEEEEEEC--C
T ss_pred             CcceEEEEecCCC-cceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCC--CCCCCcccCcceEEEEEec--C
Confidence            4799999999874 456899999999999999999999999999999999886532  1257899999999999995  5


Q ss_pred             CCCCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHH--hhCCccCCCCCCC-
Q 020314           85 VKNFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQ--SLGVKLDGSGQQK-  155 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~--~~~~~~~~~~~~~-  155 (327)
                      ++++++||||++..      .+|+|+||++++++.++++|+++++++||.+++++.|+|.++..  ..++     ++++ 
T Consensus        77 v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~g~~  151 (328)
T 1xa0_A           77 HPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGL-----TPERG  151 (328)
T ss_dssp             SSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTC-----CGGGC
T ss_pred             CCCCCCCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCC-----CCCCc
Confidence            68899999999853      46999999999999999999999999999999999999988753  3556     7886 


Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWST  234 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  234 (327)
                      +|||+|++|++|++++|+|++.|++|+++++ ++++++++++|++.++|+++.+....+...+.++|++|||+|++.+..
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~  231 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLAT  231 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTTTHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHHHHHH
Confidence            8999999999999999999999999999985 578999999999999987654222222333458999999999988999


Q ss_pred             cccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-CCC----HHHHHHHHHHHHCCceeEecceeeccccHHH
Q 020314          235 FEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-SPK----GENLDFLVKLVKEGKLKTVIDSKHSLSKAED  309 (327)
Q Consensus       235 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~  309 (327)
                      ++++++++|+++.+|...+....+....+..+++++.+... ...    .+.++.+.++++++ +++ +.++|+++++++
T Consensus       232 ~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~-~~~~~~l~~~~~  309 (328)
T 1xa0_A          232 VLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LER-IAQEISLAELPQ  309 (328)
T ss_dssp             HHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHH-HEEEEEGGGHHH
T ss_pred             HHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Cce-eeeEeCHHHHHH
Confidence            99999999999999865432222222334556777776421 122    24466777777777 765 468999999999


Q ss_pred             HHHHHhcCCCCccEEEeC
Q 020314          310 AWAKSISGRATGKIIVEP  327 (327)
Q Consensus       310 a~~~~~~~~~~gkvvv~~  327 (327)
                      ||+.+.+++..||+|+++
T Consensus       310 A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          310 ALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             HHHHHHHTCCCSEEEEEC
T ss_pred             HHHHHHcCCCCCeEEEEe
Confidence            999999998899999875

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2e-50  Score=356.95  Aligned_cols=309  Identities=21%  Similarity=0.248  Sum_probs=259.4

Q ss_pred             ccceEEEEEecc--CC-CccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeeccc----ceE
Q 020314            4 KAVMHAVQYDSY--GG-GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASD----VAG   76 (327)
Q Consensus         4 ~~~~~a~~~~~~--g~-~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e----~~G   76 (327)
                      +++||+|+++++  |. +++.+++++.+.|+|.++||+|||.++|||++|++.+.+...    ..+|.++|||    ++|
T Consensus         5 ~~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~----~~~p~~~G~e~g~~~~G   80 (336)
T 4b7c_A            5 SQINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS----YIPPVGIGEVMRALGVG   80 (336)
T ss_dssp             -CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC----SSCCCCTTSBCCCEEEE
T ss_pred             cccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc----cCCCCCCCcccCCceEE
Confidence            478999999873  21 267899999999999999999999999999999998877532    2346666776    799


Q ss_pred             EEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhh--cccCchHHHHHHHHHHhhCCccCCCCCC
Q 020314           77 EVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEG--AGIPCAGLTAHQALTQSLGVKLDGSGQQ  154 (327)
Q Consensus        77 ~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~a--a~~~~~~~ta~~al~~~~~~~~~~~~~~  154 (327)
                      +|++  +++++|++||||++.   |+|+||++++++.++++|+++++.++  +++++++.|||+++.+..++     ++|
T Consensus        81 ~V~~--~~v~~~~vGdrV~~~---G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~-----~~g  150 (336)
T 4b7c_A           81 KVLV--SKHPGFQAGDYVNGA---LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQP-----KNG  150 (336)
T ss_dssp             EEEE--ECSTTCCTTCEEEEE---CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCC-----CTT
T ss_pred             EEEe--cCCCCCCCCCEEecc---CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCC-----CCC
Confidence            9999  558899999999984   89999999999999999999987776  78899999999999888888     899


Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH-HhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV-KSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~-~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      ++|||+|++|++|++++|+|+..|++|+++++ +++++.+ +++|++.++|+.+.+.  .+.+.+ ++++|++|||+|++
T Consensus       151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vi~~~g~~  229 (336)
T 4b7c_A          151 ETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKREC-PKGIDVFFDNVGGE  229 (336)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHC-TTCEEEEEESSCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhc-CCCceEEEECCCcc
Confidence            99999999999999999999999999999985 4788888 8999999999877662  233333 46899999999988


Q ss_pred             cccccccccCCCcEEEeecCCchh------HHHHhhhhccccceeeEEEEeCC----CHHHHHHHHHHHHCCceeEecce
Q 020314          231 PWSTFEPNLGTTGKVIDFNPSPRV------LLTFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKLKTVIDS  300 (327)
Q Consensus       231 ~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~  300 (327)
                      .+..++++++++|+++.+|.....      ...+....+..+++++.++....    .++.++++++++++|++++.+..
T Consensus       230 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~  309 (336)
T 4b7c_A          230 ILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDI  309 (336)
T ss_dssp             HHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEE
T ss_pred             hHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceee
Confidence            899999999999999999865421      11333445566777777754322    24788999999999999987777


Q ss_pred             eeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          301 KHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       301 ~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++++++||+.+.+++..||+|+++
T Consensus       310 ~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          310 VEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             EECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            899999999999999999999999975

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.6e-51  Score=364.99  Aligned_cols=310  Identities=22%  Similarity=0.324  Sum_probs=239.2

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      .+|||+++++++++   +++++.+.|+|.++||+|||.++|||++|++.+.|.++.. ...+|.++|||++|+|+++|++
T Consensus         2 ~~mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~p~i~G~E~~G~V~~vG~~   77 (344)
T 2h6e_A            2 VKSKAALLKKFSEP---LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQ-GFRLPIILGHENAGTIVEVGEL   77 (344)
T ss_dssp             EEEEBCEECSCCC--------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCT-TCCSSEECCCCEEEEEEEECTT
T ss_pred             ceeEEEEEecCCCC---CeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCccc-CCCCCccccccceEEEEEECCC
Confidence            47999999988743   8889999999999999999999999999999999876411 1257999999999999999999


Q ss_pred             CCCCCCCCEEEEEc---------------------------cCcccceeEeec-CCceeeCCCCCChhhhcccCchHHHH
Q 020314           85 VKNFKVGDKVVAVL---------------------------SGGGLAEFAVAK-ESLTVARPQEVSAAEGAGIPCAGLTA  136 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~-~~~~~~ip~~~~~~~aa~~~~~~~ta  136 (327)
                       ++|++||||++..                           .+|+|+||++++ ++.++++ +++++++||.+++++.||
T Consensus        78 -~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta  155 (344)
T 2h6e_A           78 -AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTS  155 (344)
T ss_dssp             -CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHH
T ss_pred             -CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHH
Confidence             9999999998753                           369999999999 9999999 999999999999999999


Q ss_pred             HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEec-CCcHHHHHhcCCCEEEeCCC-CCcccc
Q 020314          137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCG-ARNIELVKSLGADEVLDYKT-PDGAAL  212 (327)
Q Consensus       137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~-~~~~~~  212 (327)
                      |+++.+.... .... +|++|||+|+ |++|++++|+|+++  |++|+++++ ++++++++++|++.++|+++ .+. ..
T Consensus       156 ~~al~~~~~~-~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~-~~  231 (344)
T 2h6e_A          156 MGAIRQALPF-ISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESL-IN  231 (344)
T ss_dssp             HHHHHHHHHH-HTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHH-HH
T ss_pred             HHHHHhhhhc-ccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHH-HH
Confidence            9999654100 0012 6889999997 99999999999999  999999985 57889999999999998764 321 11


Q ss_pred             cCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHC
Q 020314          213 KSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKE  291 (327)
Q Consensus       213 ~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (327)
                      +.+.++++|++||++|++ .+..++++++++|+++.+|..... ..+....+..+++++.+. .....++++++++++++
T Consensus       232 ~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~i~g~-~~~~~~~~~~~~~l~~~  309 (344)
T 2h6e_A          232 KLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR-VSLEAFDTAVWNKKLLGS-NYGSLNDLEDVVRLSES  309 (344)
T ss_dssp             HHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSC-CCCCHHHHHHTTCEEEEC-CSCCHHHHHHHHHHHHT
T ss_pred             HhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCC-cccCHHHHhhCCcEEEEE-ecCCHHHHHHHHHHHHc
Confidence            222355899999999987 689999999999999999865432 223333455677777773 34467889999999999


Q ss_pred             CceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          292 GKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       292 g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      |++++.+ ++|+++++++||+.+.+++..||+|+++
T Consensus       310 g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          310 GKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             TSSCCCE-EEECC----------------CEEEECC
T ss_pred             CCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            9999888 9999999999999999988889999975

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=3.2e-51  Score=362.85  Aligned_cols=306  Identities=22%  Similarity=0.264  Sum_probs=255.5

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++++++++   +++++.+.|+|.++||+|||.++|||++|++++.|.++......+|.++|||++|+|+++|++++
T Consensus         1 Mka~~~~~~g~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   77 (343)
T 2dq4_A            1 MRALAKLAPEEG---LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVR   77 (343)
T ss_dssp             CEEEEECSSSSS---CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CeEEEEeCCCCc---EEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCC
Confidence            799999998764   89999999999999999999999999999999998653100125789999999999999999999


Q ss_pred             CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      +|++||||++.+                           .+|+|+||++++++.++++|+++++++||.+ .++.|||++
T Consensus        78 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~  156 (343)
T 2dq4_A           78 RPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHT  156 (343)
T ss_dssp             SSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHH
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHH
Confidence            999999999842                           4699999999999999999999999999887 567799999


Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCCc--ccccCC
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPDG--AALKSP  215 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~--~~~~~~  215 (327)
                      +.+..++      +|++|||+|+ |++|++++|+|+.+|+ +|++++++ +++++++++ ++.++++++.+.  .+.+.+
T Consensus       157 l~~~~~~------~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~  228 (343)
T 2dq4_A          157 VYAGSGV------SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT  228 (343)
T ss_dssp             HHSTTCC------TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHH
T ss_pred             HHHhCCC------CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhc
Confidence            9534433      7889999997 9999999999999999 99999854 678888889 999999876552  233334


Q ss_pred             CCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhh-hhccccceeeEEEEeCCCHHHHHHHHHHHHCCc
Q 020314          216 SGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAW-KKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       216 ~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  293 (327)
                       ++++|++||++|+ +.++.++++++++|+++.+|..... ..+.. ..+..+++++.+.......++++++++++++|+
T Consensus       229 -~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~  306 (343)
T 2dq4_A          229 -GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDP-IRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGR  306 (343)
T ss_dssp             -SSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC-EEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTS
T ss_pred             -CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-ceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCC
Confidence             5689999999998 5588999999999999999865322 22333 455667777777433325678999999999999


Q ss_pred             e--eEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          294 L--KTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       294 l--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +  +++++++|+++++++|++.+.+++. ||+|+++
T Consensus       307 ~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~  341 (343)
T 2dq4_A          307 VDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDP  341 (343)
T ss_dssp             SCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEET
T ss_pred             CChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEee
Confidence            5  5677889999999999999998887 9999875

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=9.3e-50  Score=356.08  Aligned_cols=305  Identities=21%  Similarity=0.276  Sum_probs=253.3

Q ss_pred             ceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCC
Q 020314            6 VMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEV   85 (327)
Q Consensus         6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~   85 (327)
                      +||++.+..++. ++.+++++.+.|+|.++||+|||.++|||++|++.+.|.++.   ..+|.++|||++|+|+++|+++
T Consensus        14 ~mk~~~~~~~~~-~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~V   89 (366)
T 1yqd_A           14 PVKAFGWAARDQ-SGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF---SMYPLVPGHEIVGEVTEVGSKV   89 (366)
T ss_dssp             SEEEEEEEECST-TCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC---CCSSBCCCCCEEEEEEEECTTC
T ss_pred             CeeEEEEEEcCC-CCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC---CCCCEecccceEEEEEEECCCC
Confidence            345555544543 456999999999999999999999999999999999987542   3578999999999999999999


Q ss_pred             CCCCCCCEEEEEc-----------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314           86 KNFKVGDKVVAVL-----------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP  130 (327)
Q Consensus        86 ~~~~~Gd~V~~~~-----------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~  130 (327)
                      ++|++||||+..+                                   .+|+|+||++++++.++++|+++++++||.++
T Consensus        90 ~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~  169 (366)
T 1yqd_A           90 KKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLL  169 (366)
T ss_dssp             CSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGG
T ss_pred             CcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhh
Confidence            9999999998521                                   46899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHhhCCccCCCC-CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH-hcCCCEEEeCCCC
Q 020314          131 CAGLTAHQALTQSLGVKLDGSG-QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK-SLGADEVLDYKTP  207 (327)
Q Consensus       131 ~~~~ta~~al~~~~~~~~~~~~-~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~-~lg~~~v~~~~~~  207 (327)
                      +++.|||+++. ..++     + +|++|||+| +|++|++++|+|+..|++|+++++ +++++.++ ++|++.++|+.+.
T Consensus       170 ~~~~ta~~al~-~~~~-----~~~g~~VlV~G-aG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~  242 (366)
T 1yqd_A          170 CAGITVYSPLK-YFGL-----DEPGKHIGIVG-LGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQ  242 (366)
T ss_dssp             THHHHHHHHHH-HTTC-----CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCH
T ss_pred             hhHHHHHHHHH-hcCc-----CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCH
Confidence            99999999995 4566     6 999999999 599999999999999999999984 56777776 9999999987753


Q ss_pred             CcccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHH
Q 020314          208 DGAALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLV  286 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (327)
                      + .+.+.+  +++|++||++|.. .++.++++++++|+++.+|..... ..+....+..+++++.+. .....+++++++
T Consensus       243 ~-~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~i~g~-~~~~~~~~~~~~  317 (366)
T 1yqd_A          243 E-QMQAAA--GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKP-LELPAFSLIAGRKIVAGS-GIGGMKETQEMI  317 (366)
T ss_dssp             H-HHHHTT--TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSC-EEECHHHHHTTTCEEEEC-CSCCHHHHHHHH
T ss_pred             H-HHHHhh--CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCC-CCcCHHHHHhCCcEEEEe-cCCCHHHHHHHH
Confidence            2 222222  3799999999976 588999999999999999865432 122333455677777763 334577899999


Q ss_pred             HHHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          287 KLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       287 ~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +++++|++++.+ ++|+++++++||+.+.+++..||+|+.+
T Consensus       318 ~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (366)
T 1yqd_A          318 DFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDV  357 (366)
T ss_dssp             HHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECH
T ss_pred             HHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEc
Confidence            999999998766 6999999999999999999899999863

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=9.3e-51  Score=367.18  Aligned_cols=310  Identities=20%  Similarity=0.263  Sum_probs=258.1

Q ss_pred             cceEEEEEeccCCCc------------------------cceEEeeccCCC-CCCCeEEEEEeEEeeChhhHHHHhcCCC
Q 020314            5 AVMHAVQYDSYGGGV------------------------AGLKHVEVPVPT-PNKDEALLKVEAASINPIDWKLQKGMLR   59 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~------------------------~~l~~~~~~~~~-~~~~eV~V~v~~~~i~~~d~~~~~g~~~   59 (327)
                      |+|||+++++++++.                        ..+++++.+.|+ |.++||+|||.++|||++|++++.|...
T Consensus         1 ~~m~a~~~~~~~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~   80 (404)
T 3ip1_A            1 MSLRAVRLHAKWDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEE   80 (404)
T ss_dssp             -CEEEEEEEEEECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTT
T ss_pred             CcceEEEecCCCCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCC
Confidence            579999999988743                        268899999999 9999999999999999999999987532


Q ss_pred             C---C-CCCCCCeeecccceEEEEecCCCC------CCCCCCCEEEEEc---------------------------cCcc
Q 020314           60 P---F-LPRKFPFIPASDVAGEVIGLGSEV------KNFKVGDKVVAVL---------------------------SGGG  102 (327)
Q Consensus        60 ~---~-~~~~~p~~~G~e~~G~V~~vG~~~------~~~~~Gd~V~~~~---------------------------~~g~  102 (327)
                      .   + ....+|.++|||++|+|+++|+++      ++|++||||++.+                           .+|+
T Consensus        81 ~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~  160 (404)
T 3ip1_A           81 GYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGA  160 (404)
T ss_dssp             SBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCS
T ss_pred             ccccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCC
Confidence            1   1 113689999999999999999999      8999999999842                           4799


Q ss_pred             cceeEeecCCceeeCCCCCC------hhhhcccCchHHHHHHHHHHh-hCCccCCCCCCCeEEEEcCCChHHHHHHHHHH
Q 020314          103 LAEFAVAKESLTVARPQEVS------AAEGAGIPCAGLTAHQALTQS-LGVKLDGSGQQKNILITAASGAVGLYAVQLAK  175 (327)
Q Consensus       103 ~a~~~~~~~~~~~~ip~~~~------~~~aa~~~~~~~ta~~al~~~-~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~  175 (327)
                      |+||++++++.++++|+.++      +.++|+++.++.|||+++... +++     ++|++|||+|+ |++|++++|+|+
T Consensus       161 ~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~-----~~g~~VlV~Ga-G~vG~~aiqlak  234 (404)
T 3ip1_A          161 FAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGI-----RPGDNVVILGG-GPIGLAAVAILK  234 (404)
T ss_dssp             SBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCC-----CTTCEEEEECC-SHHHHHHHHHHH
T ss_pred             CcceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCC-----CCCCEEEEECC-CHHHHHHHHHHH
Confidence            99999999999999999875      466889999999999999644 367     89999999996 999999999999


Q ss_pred             hCCC-eEEEEe-cCCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCC--ccccccccc----CCCcEE
Q 020314          176 LGNT-HVTATC-GARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGI--PWSTFEPNL----GTTGKV  245 (327)
Q Consensus       176 ~~g~-~v~~~~-~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~--~~~~~~~~l----~~~G~~  245 (327)
                      ++|+ +|++++ +++|+++++++|++.++++++.+  ..+.+.+.++++|++|||+|++  .+..+++++    +++|++
T Consensus       235 ~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~i  314 (404)
T 3ip1_A          235 HAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATV  314 (404)
T ss_dssp             HTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEE
T ss_pred             HcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEE
Confidence            9999 899988 45789999999999999987766  3455667778999999999987  466677777    999999


Q ss_pred             EeecCCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee--EecceeeccccHHHHHHHHhcCCCCccE
Q 020314          246 IDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK--TVIDSKHSLSKAEDAWAKSISGRATGKI  323 (327)
Q Consensus       246 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gkv  323 (327)
                      +.+|..... ..+....+.++++++.+.......+.++++++++++| ++  ++++++|+++++++||+.+.    .||+
T Consensus       315 v~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKv  388 (404)
T 3ip1_A          315 AIVARADAK-IPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKS  388 (404)
T ss_dssp             EECSCCCSC-EEECHHHHHHTTCEEEECCCCCSTTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTT
T ss_pred             EEeCCCCCC-CcccHHHHhccceEEEEecCCCchHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcE
Confidence            999976543 2344556667888888754334467899999999999 65  57889999999999999987    4666


Q ss_pred             EEe
Q 020314          324 IVE  326 (327)
Q Consensus       324 vv~  326 (327)
                      |++
T Consensus       389 vl~  391 (404)
T 3ip1_A          389 LVK  391 (404)
T ss_dssp             CSC
T ss_pred             EEe
Confidence            654

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.3e-50  Score=365.78  Aligned_cols=304  Identities=19%  Similarity=0.219  Sum_probs=254.6

Q ss_pred             ceEEEEEeccCCCccceEEeeccCCCC-CC-----CeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEE
Q 020314            6 VMHAVQYDSYGGGVAGLKHVEVPVPTP-NK-----DEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVI   79 (327)
Q Consensus         6 ~~~a~~~~~~g~~~~~l~~~~~~~~~~-~~-----~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~   79 (327)
                      +|||+++++++.    +++++.+.|+| .+     +||+|||.++|||++|++++.|.++    ..+|.++|||++|+|+
T Consensus         2 ~MkA~~~~~~~~----l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~----~~~p~v~GhE~~G~V~   73 (398)
T 2dph_A            2 GNKSVVYHGTRD----LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI----VPKGHVLGHEITGEVV   73 (398)
T ss_dssp             CEEEEEEEETTE----EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC----CCTTCBCCCCEEEEEE
T ss_pred             ccEEEEEEcCCC----EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC----CCCCcccCCceEEEEE
Confidence            699999997653    89999999987 68     9999999999999999999998742    3678999999999999


Q ss_pred             ecCCCCCCCCCCCEEEEEc--------------------------------------cCcccceeEeecCC--ceeeCCC
Q 020314           80 GLGSEVKNFKVGDKVVAVL--------------------------------------SGGGLAEFAVAKES--LTVARPQ  119 (327)
Q Consensus        80 ~vG~~~~~~~~Gd~V~~~~--------------------------------------~~g~~a~~~~~~~~--~~~~ip~  119 (327)
                      ++|+++++|++||||++.+                                      .+|+|+||++++++  .++++|+
T Consensus        74 ~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~  153 (398)
T 2dph_A           74 EKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGD  153 (398)
T ss_dssp             EECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSS
T ss_pred             EECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCC
Confidence            9999999999999998631                                      25899999999987  8999999


Q ss_pred             CCChhh----hcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHH
Q 020314          120 EVSAAE----GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELV  193 (327)
Q Consensus       120 ~~~~~~----aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~  193 (327)
                      ++++++    ||+++.++.|||+++ +..++     ++|++|||+| +|++|++++|+|+++|+ +|+++++ +++++++
T Consensus       154 ~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~-----~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  226 (398)
T 2dph_A          154 KEQAMEKIKDLTLISDILPTGFHGC-VSAGV-----KPGSHVYIAG-AGPVGRCAAAGARLLGAACVIVGDQNPERLKLL  226 (398)
T ss_dssp             HHHHHHTHHHHTTTTTHHHHHHHHH-HHTTC-----CTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             CCChhhhcchhhhhcCHHHHHHHHH-HHcCC-----CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            999998    899999999999999 67788     8999999999 59999999999999999 9999985 4788999


Q ss_pred             HhcCCCEEEeCCCCCc---ccccCCCCCcccEEEeCCCCC---------------cccccccccCCCcEEEeecCCc---
Q 020314          194 KSLGADEVLDYKTPDG---AALKSPSGRKYDAVINCVTGI---------------PWSTFEPNLGTTGKVIDFNPSP---  252 (327)
Q Consensus       194 ~~lg~~~v~~~~~~~~---~~~~~~~~~~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~---  252 (327)
                      +++|++ ++++.+.+.   .+.+.+++.++|++||++|++               .+..++++++++|+++.+|...   
T Consensus       227 ~~lGa~-~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~  305 (398)
T 2dph_A          227 SDAGFE-TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSD  305 (398)
T ss_dssp             HTTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCC
T ss_pred             HHcCCc-EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccc
Confidence            999996 888766542   233445556899999999975               3778999999999999998651   


Q ss_pred             ---------hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee--E--ecceeeccccHHHHHHHHhcCCC
Q 020314          253 ---------RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK--T--VIDSKHSLSKAEDAWAKSISGRA  319 (327)
Q Consensus       253 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~--~~~~~~~~~~~~~a~~~~~~~~~  319 (327)
                               .....+....+..+++++.+ +.....+.++++++++++|+++  +  +++++|+++++++||+.+.+++.
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~k~~~i~g-~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~  384 (398)
T 2dph_A          306 PDPVNKDAGSGRLHLDFGKMWTKSIRIMT-GMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP  384 (398)
T ss_dssp             SSCSSHHHHTTEEEEEHHHHHHTTCEEEC-SSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCS
T ss_pred             cccccccccCCcccccHHHHhhcCCEEEE-eccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCc
Confidence                     11112223344556666665 2233467789999999999998  6  67889999999999999999888


Q ss_pred             CccEEEeC
Q 020314          320 TGKIIVEP  327 (327)
Q Consensus       320 ~gkvvv~~  327 (327)
                       ||+|+.+
T Consensus       385 -gKvvv~~  391 (398)
T 2dph_A          385 -AKFVIDP  391 (398)
T ss_dssp             -CEEEECT
T ss_pred             -eEEEEec
Confidence             9999864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-49  Score=359.45  Aligned_cols=305  Identities=18%  Similarity=0.198  Sum_probs=250.6

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCC-CCe------EEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEE
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPN-KDE------ALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGE   77 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~-~~e------V~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~   77 (327)
                      ++|||+++.+++.    +++++.+.|+|. ++|      |+|||.++|||++|++++.|.++    ..+|.++|||++|+
T Consensus         1 ~~Mka~~~~~~~~----l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~p~v~GhE~~G~   72 (398)
T 1kol_A            1 SGNRGVVYLGSGK----VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT----AQVGLVLGHEITGE   72 (398)
T ss_dssp             -CEEEEEEEETTE----EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC----CCTTCBCCCCEEEE
T ss_pred             CccEEEEEecCCc----eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC----CCCCcccCcccEEE
Confidence            3699999987653    899999999987 898      99999999999999999998753    35789999999999


Q ss_pred             EEecCCCCCCCCCCCEEEEEc-------------------------------------cCcccceeEeecCC--ceeeCC
Q 020314           78 VIGLGSEVKNFKVGDKVVAVL-------------------------------------SGGGLAEFAVAKES--LTVARP  118 (327)
Q Consensus        78 V~~vG~~~~~~~~Gd~V~~~~-------------------------------------~~g~~a~~~~~~~~--~~~~ip  118 (327)
                      |+++|+++++|++||||+...                                     .+|+|+||+++++.  .++++|
T Consensus        73 V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P  152 (398)
T 1kol_A           73 VIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLP  152 (398)
T ss_dssp             EEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECS
T ss_pred             EEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECC
Confidence            999999999999999998421                                     24899999999987  899999


Q ss_pred             CCCChhh----hcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHH
Q 020314          119 QEVSAAE----GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIEL  192 (327)
Q Consensus       119 ~~~~~~~----aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~  192 (327)
                      +++++++    +++++.++.|||+++. ..++     ++|++|||+| +|++|++++|+|+++|+ +|+++++ ++|+++
T Consensus       153 ~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~-----~~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 1kol_A          153 DRDKAMEKIRDLTCLSDILPTGYHGAV-TAGV-----GPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAH  225 (398)
T ss_dssp             CHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCcchhhhcccccccccHHHHHHHHHH-HcCC-----CCCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHH
Confidence            9999888    7889999999999994 6777     8999999999 69999999999999999 7888875 578899


Q ss_pred             HHhcCCCEEEeCCCCC---cccccCCCCCcccEEEeCCCCC----------------cccccccccCCCcEEEeecCC-c
Q 020314          193 VKSLGADEVLDYKTPD---GAALKSPSGRKYDAVINCVTGI----------------PWSTFEPNLGTTGKVIDFNPS-P  252 (327)
Q Consensus       193 ~~~lg~~~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~----------------~~~~~~~~l~~~G~~v~~g~~-~  252 (327)
                      ++++|++ ++++++.+   ..+.+.+++.++|++||++|++                .+..++++++++|+++.+|.. .
T Consensus       226 a~~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~  304 (398)
T 1kol_A          226 AKAQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVT  304 (398)
T ss_dssp             HHHTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCS
T ss_pred             HHHcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccC
Confidence            9999997 77876543   2234445667899999999975                467889999999999999854 1


Q ss_pred             hh-----------HHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee---EecceeeccccHHHHHHHHhcCC
Q 020314          253 RV-----------LLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK---TVIDSKHSLSKAEDAWAKSISGR  318 (327)
Q Consensus       253 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~---~~~~~~~~~~~~~~a~~~~~~~~  318 (327)
                      +.           ...+....+..+++++.+ ......+.++++++++++|+++   ++++++|+++++++||+.+.+++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~  383 (398)
T 1kol_A          305 EDPGAVDAAAKIGSLSIRFGLGWAKSHSFHT-GQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGV  383 (398)
T ss_dssp             CCTTCSSHHHHTTCCCCCHHHHHHTTCEEEE-SSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTC
T ss_pred             CcccccccccccccccccHHHHhhcccEEEe-cccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCC
Confidence            11           011122233445555554 2223456789999999999998   46788999999999999999988


Q ss_pred             CCccEEEeC
Q 020314          319 ATGKIIVEP  327 (327)
Q Consensus       319 ~~gkvvv~~  327 (327)
                      . ||+|+++
T Consensus       384 ~-gKvvi~~  391 (398)
T 1kol_A          384 P-KKFVIDP  391 (398)
T ss_dssp             S-CEEEECT
T ss_pred             c-eEEEEEe
Confidence            7 9999864

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=5.2e-50  Score=356.81  Aligned_cols=297  Identities=18%  Similarity=0.165  Sum_probs=249.1

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCC---CeeecccceEEEEecCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF---PFIPASDVAGEVIGLGS   83 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~---p~~~G~e~~G~V~~vG~   83 (327)
                      |||+++++++++   +++++.+.|+|.++||+|||.++|||++|++++.|.++.   ..+   |.++|||++| |+++|+
T Consensus         1 MkA~~~~~~~~~---l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~~~~p~v~G~E~~G-V~~vG~   73 (357)
T 2b5w_A            1 MKAIAVKRGEDR---PVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG---FPEGEDHLVLGHEAVG-VVVDPN   73 (357)
T ss_dssp             CEEEEEETTCSS---CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT---SCTTCSEEECCSEEEE-EEEECT
T ss_pred             CeEEEEeCCCCc---eEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC---CCCCCCCcccCceeEE-EEEECC
Confidence            799999987753   899999999999999999999999999999999987542   245   8999999999 999999


Q ss_pred             CCCCCCCCCEEEEEc--------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCc
Q 020314           84 EVKNFKVGDKVVAVL--------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPC  131 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~--------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~  131 (327)
                      + ++|++||||++.+                                .+|+|+||++++++.++++|++++ ++ |+++.
T Consensus        74 ~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~-aal~~  150 (357)
T 2b5w_A           74 D-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-EL-GFLIE  150 (357)
T ss_dssp             T-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TT-GGGHH
T ss_pred             C-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hh-hhhhc
Confidence            9 9999999998751                                259999999999999999999999 54 55778


Q ss_pred             hHHHHHHHHHHhhCCccCCCCCC------CeEEEEcCCChHHHHH-HHHH-HhCCCe-EEEEecC-C---cHHHHHhcCC
Q 020314          132 AGLTAHQALTQSLGVKLDGSGQQ------KNILITAASGAVGLYA-VQLA-KLGNTH-VTATCGA-R---NIELVKSLGA  198 (327)
Q Consensus       132 ~~~ta~~al~~~~~~~~~~~~~~------~~vlV~g~~g~~G~~~-~~la-~~~g~~-v~~~~~~-~---~~~~~~~lg~  198 (327)
                      ++.|||+++ +..++     ++|      ++|||+|+ |++|+++ +|+| +++|++ |++++++ +   |+++++++|+
T Consensus       151 ~~~ta~~al-~~~~~-----~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa  223 (357)
T 2b5w_A          151 PISITEKAL-EHAYA-----SRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDA  223 (357)
T ss_dssp             HHHHHHHHH-HHHHH-----TTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTC
T ss_pred             hHHHHHHHH-HhcCC-----CCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCC
Confidence            999999999 66777     788      99999997 9999999 9999 999996 9999964 6   7899999999


Q ss_pred             CEEEeCCCCCc-ccccCCCCCcccEEEeCCCCC-cccccccccCCCcEEEeecCCchhHHHHhhhhc----cccceeeEE
Q 020314          199 DEVLDYKTPDG-AALKSPSGRKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKL----TFSKKQLVP  272 (327)
Q Consensus       199 ~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~----~~~~~~~~~  272 (327)
                      +.+ |+++.+. ++.+. .+ ++|++||++|++ .+..++++++++|+++.+|........+....+    ..+++++.+
T Consensus       224 ~~v-~~~~~~~~~i~~~-~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g  300 (357)
T 2b5w_A          224 TYV-DSRQTPVEDVPDV-YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVG  300 (357)
T ss_dssp             EEE-ETTTSCGGGHHHH-SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred             ccc-CCCccCHHHHHHh-CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEE
Confidence            999 8876552 32233 34 899999999986 589999999999999999865411122223333    567777777


Q ss_pred             EEeCCCHHHHHHHHHHHHCC--c-eeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          273 FSVSPKGENLDFLVKLVKEG--K-LKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~g--~-l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      . .....++++++++++++|  + ++++++++|+++++++||+.+   +..||+|+++
T Consensus       301 ~-~~~~~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~  354 (357)
T 2b5w_A          301 S-VNSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEF  354 (357)
T ss_dssp             C-CCCCHHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEEC
T ss_pred             e-ccCCHHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEe
Confidence            3 334578899999999999  8 688888999999999999988   4578999875

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=7.2e-49  Score=341.85  Aligned_cols=293  Identities=26%  Similarity=0.362  Sum_probs=246.2

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.+++++ +  .+++.+.|++.++||+|||.++|||++|++++.|.++.  ...+|.++|||++|+|+       
T Consensus         1 Mka~~~~~~g~~-~--~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~e~~G~V~-------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGP-L--ELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVVE-------   68 (302)
T ss_dssp             CEEEEECSTTSC-E--EEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEET-------
T ss_pred             CeEEEEcCCCCc-h--heEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcccceEEEEEE-------
Confidence            799999998863 3  34588888999999999999999999999999987642  12578999999999997       


Q ss_pred             CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314           87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV  166 (327)
Q Consensus        87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~  166 (327)
                          ||||++...+|+|+||++++++.++++|+++++++||++++++.|||+++.+.. +     ++|++|||+|++|++
T Consensus        69 ----GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~-----~~g~~vlV~Ga~G~v  138 (302)
T 1iz0_A           69 ----GRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-A-----RPGEKVLVQAAAGAL  138 (302)
T ss_dssp             ----TEEEEEECSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-C-----CTTCEEEESSTTBHH
T ss_pred             ----CcEEEEecCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-C-----CCCCEEEEECCCcHH
Confidence                999999877899999999999999999999999999999999999999997666 7     899999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCC-CCc-ccccCCCCCcccEEEeCCCCCcccccccccCCCc
Q 020314          167 GLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKT-PDG-AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTG  243 (327)
Q Consensus       167 G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~-~~~-~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G  243 (327)
                      |++++|+|+..|++|+++++ +++++.++++|++.++++++ .+. +.+     +++|++|| +|++.+..++++++++|
T Consensus       139 G~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~-----~~~d~vid-~g~~~~~~~~~~l~~~G  212 (302)
T 1iz0_A          139 GTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW-----GGLDLVLE-VRGKEVEESLGLLAHGG  212 (302)
T ss_dssp             HHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT-----TSEEEEEE-CSCTTHHHHHTTEEEEE
T ss_pred             HHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh-----cCceEEEE-CCHHHHHHHHHhhccCC
Confidence            99999999999999999996 57888889999999998765 332 111     57999999 99877999999999999


Q ss_pred             EEEeecCCchhHHHHhhhhccccceeeEEEEe---CCCHHHHHHHHH---HHHCCceeEecceeeccccHHHHHHHHhcC
Q 020314          244 KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV---SPKGENLDFLVK---LVKEGKLKTVIDSKHSLSKAEDAWAKSISG  317 (327)
Q Consensus       244 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~  317 (327)
                      +++.+|........+....+..+++++.+...   ....+.++++++   ++++|++++.++++|+++++++|++.+.++
T Consensus       213 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~  292 (302)
T 1iz0_A          213 RLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAAFRALLDR  292 (302)
T ss_dssp             EEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGGHHHHHHHTTCT
T ss_pred             EEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcccccceEEcHHHHHHHHHHHHcC
Confidence            99999865432222333345566677766432   235678999999   999999999888999999999999999998


Q ss_pred             CCCccEEEeC
Q 020314          318 RATGKIIVEP  327 (327)
Q Consensus       318 ~~~gkvvv~~  327 (327)
                      +..||+++++
T Consensus       293 ~~~gKvvv~~  302 (302)
T 1iz0_A          293 GHTGKVVVRL  302 (302)
T ss_dssp             TCCBEEEEEC
T ss_pred             CCCceEEEeC
Confidence            8889999875

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1e-48  Score=348.81  Aligned_cols=312  Identities=19%  Similarity=0.171  Sum_probs=255.6

Q ss_pred             CccceEEEEE-ecc---CCC-ccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcC----CCCCCCCCCCeeecc
Q 020314            3 GKAVMHAVQY-DSY---GGG-VAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGM----LRPFLPRKFPFIPAS   72 (327)
Q Consensus         3 ~~~~~~a~~~-~~~---g~~-~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~----~~~~~~~~~p~~~G~   72 (327)
                      .|++|||+++ ..+   |.+ ++.+++++.+.|+| .++||+|||.++|||++|++.+.+.    ++  .+..+|.++||
T Consensus         5 ~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~--~~~~~p~v~G~   82 (357)
T 2zb4_A            5 AAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYI--TPWQLSQVVDG   82 (357)
T ss_dssp             -CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSS--CCCCBTSBCEE
T ss_pred             ccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccc--CCCCCCccccc
Confidence            5789999999 565   442 37899999999998 9999999999999999999877762    21  12357889999


Q ss_pred             cceEEEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCC-----ChhhhcccCchHHHHHHHHHHhhCCc
Q 020314           73 DVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEV-----SAAEGAGIPCAGLTAHQALTQSLGVK  147 (327)
Q Consensus        73 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~-----~~~~aa~~~~~~~ta~~al~~~~~~~  147 (327)
                      |++|+|++  +++++|++||||++.  .|+|+||++++++.++++|+++     +++ +++++.++.|||+++.+..++ 
T Consensus        83 E~~G~V~~--~~v~~~~vGdrV~~~--~G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~-  156 (357)
T 2zb4_A           83 GGIGIIEE--SKHTNLTKGDFVTSF--YWPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHI-  156 (357)
T ss_dssp             EEEEEEEE--ECSTTCCTTCEEEEE--EEESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCC-
T ss_pred             cEEEEEEe--cCCCCCCCCCEEEec--CCCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCC-
Confidence            99999999  889999999999985  4899999999999999999998     544 788899999999999888888 


Q ss_pred             cCCCCCC--CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHh-cCCCEEEeCCCCCc--ccccCCCCCcc
Q 020314          148 LDGSGQQ--KNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKS-LGADEVLDYKTPDG--AALKSPSGRKY  220 (327)
Q Consensus       148 ~~~~~~~--~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~-lg~~~v~~~~~~~~--~~~~~~~~~~~  220 (327)
                          ++|  ++|||+|++|++|++++|+++..|+ +|++++++ ++++.+++ +|++.++|+.+.+.  .+.+.+.+ ++
T Consensus       157 ----~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~~  231 (357)
T 2zb4_A          157 ----TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPA-GV  231 (357)
T ss_dssp             ----CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTT-CE
T ss_pred             ----CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCC-CC
Confidence                889  9999999999999999999999999 99999865 67777765 99999998876552  23333444 89


Q ss_pred             cEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHh---------hhhccccceeeEEEEeCC----CHHHHHHHHH
Q 020314          221 DAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFA---------WKKLTFSKKQLVPFSVSP----KGENLDFLVK  287 (327)
Q Consensus       221 d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  287 (327)
                      |++|||+|+..+..++++++++|+++.+|........+.         ...+..+++++.++....    ..+.++++++
T Consensus       232 d~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  311 (357)
T 2zb4_A          232 DVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQ  311 (357)
T ss_dssp             EEEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHH
T ss_pred             CEEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHH
Confidence            999999998778999999999999999986543111111         123445666666643211    2567899999


Q ss_pred             HHHCCceeEecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          288 LVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       288 ~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      ++++|++++.+..+|+++++++||+.+.+++..||+|+++
T Consensus       312 l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  351 (357)
T 2zb4_A          312 WFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCI  351 (357)
T ss_dssp             HHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEE
Confidence            9999999876667799999999999999998889999874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=2.4e-49  Score=382.76  Aligned_cols=305  Identities=24%  Similarity=0.285  Sum_probs=255.6

Q ss_pred             EEEEeccCCCccceEEeeccC--CCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            9 AVQYDSYGGGVAGLKHVEVPV--PTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         9 a~~~~~~g~~~~~l~~~~~~~--~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      .+.+..+|. ++.+++++.+.  |+|.++||+|||.++|||++|++++.|.++      .|.++|||++|+|+++|++|+
T Consensus       212 ~l~~~~~G~-~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~------~~~~lG~E~aG~V~~vG~~V~  284 (795)
T 3slk_A          212 RLEATRPGS-LDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP------GVASLGSEGAGVVVETGPGVT  284 (795)
T ss_dssp             CEEESSTTS-STTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS------SCCCSCCCEEEEEEEECSSCC
T ss_pred             EEecCCCCC-ccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC------CCccccceeEEEEEEeCCCCC
Confidence            345556665 67899988764  568999999999999999999999999763      356799999999999999999


Q ss_pred             CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314           87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV  166 (327)
Q Consensus        87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~  166 (327)
                      +|++||||+++ ..|+|++|+++++..++++|+++++++||.++++++|||+++.+.+++     ++|++|||+|++|++
T Consensus       285 ~~~vGDrV~~~-~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l-----~~G~~VLI~gaaGgv  358 (795)
T 3slk_A          285 GLAPGDRVMGM-IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGL-----RPGESLLVHSAAGGV  358 (795)
T ss_dssp             SSCTTCEEEEC-CSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCC-----CTTCCEEEESTTBHH
T ss_pred             cCCCCCEEEEE-ecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCC-----CCCCEEEEecCCCHH
Confidence            99999999985 679999999999999999999999999999999999999999888888     899999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcE
Q 020314          167 GLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK  244 (327)
Q Consensus       167 G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~  244 (327)
                      |++++|+|++.|++|++++++++.+.++ +|+++++++++.+  ..+.+.++++|+|+|||++|++.+..++++++++|+
T Consensus       359 G~~aiqlAk~~Ga~V~~t~~~~k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~Gr  437 (795)
T 3slk_A          359 GMAAIQLARHLGAEVYATASEDKWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGGR  437 (795)
T ss_dssp             HHHHHHHHHHTTCCEEEECCGGGGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCEE
T ss_pred             HHHHHHHHHHcCCEEEEEeChHHhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCCE
Confidence            9999999999999999999766666555 9999999988776  345667888999999999999889999999999999


Q ss_pred             EEeecCCchh---HHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceeeccccHHHHHHHHhcCCCCc
Q 020314          245 VIDFNPSPRV---LLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKHSLSKAEDAWAKSISGRATG  321 (327)
Q Consensus       245 ~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~g  321 (327)
                      ++.+|.....   ......+++.+..+++.........+.++++++++++|++++++.++|+++++++||+.+.+++..|
T Consensus       438 ~v~iG~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~~l~~g~~~G  517 (795)
T 3slk_A          438 FLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVG  517 (795)
T ss_dssp             EEECCSTTCCCHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHHHHHHTCCCB
T ss_pred             EEEeccccccCcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHHHHhcCCccc
Confidence            9999864321   1111112222222211100001124678999999999999999999999999999999999999999


Q ss_pred             cEEEeC
Q 020314          322 KIIVEP  327 (327)
Q Consensus       322 kvvv~~  327 (327)
                      |+|+++
T Consensus       518 KvVl~~  523 (795)
T 3slk_A          518 KLVLTM  523 (795)
T ss_dssp             EEEEEC
T ss_pred             eEEEec
Confidence            999874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=2.9e-49  Score=354.36  Aligned_cols=313  Identities=17%  Similarity=0.154  Sum_probs=251.4

Q ss_pred             CCCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCC------------C-C------
Q 020314            1 MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLR------------P-F------   61 (327)
Q Consensus         1 m~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~------------~-~------   61 (327)
                      |..+.+||+++....   +..+++++.+.|+|.++||+|||.++|||++|++++.|.++            + +      
T Consensus         2 m~~~~~mka~v~~~~---~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~   78 (379)
T 3iup_A            2 MHSALQLRSRIKSSG---ELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPE   78 (379)
T ss_dssp             -CEEEEEEEEECTTS---EEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCH
T ss_pred             CCchhhHHHHHhcCC---CCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcc
Confidence            667788999988532   45699999999999999999999999999999999988531            0 0      


Q ss_pred             -------CCCCCCeeecccceEEEEecCCCC-CCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchH
Q 020314           62 -------LPRKFPFIPASDVAGEVIGLGSEV-KNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAG  133 (327)
Q Consensus        62 -------~~~~~p~~~G~e~~G~V~~vG~~~-~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  133 (327)
                             ....+|.++|||++|+|+++|+++ +++++||||++. .+|+|+||++++++.++++|+++++++||++++.+
T Consensus        79 ~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~-~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  157 (379)
T 3iup_A           79 GAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI-GGAMYSQYRCIPADQCLVLPEGATPADGASSFVNP  157 (379)
T ss_dssp             HHHHHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEEC-CSCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHH
T ss_pred             ccccccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEec-CCCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhH
Confidence                   012578999999999999999999 899999999984 57999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCccCCCCCCCeEEEEc-CCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCc--
Q 020314          134 LTAHQALTQSLGVKLDGSGQQKNILITA-ASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDG--  209 (327)
Q Consensus       134 ~ta~~al~~~~~~~~~~~~~~~~vlV~g-~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~--  209 (327)
                      +|||+++....       ++|++|||+| |+|++|++++|+|++.|++|+++++ ++|+++++++|++.++|+++.+.  
T Consensus       158 ~ta~~~~~~~~-------~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~  230 (379)
T 3iup_A          158 LTALGMVETMR-------LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQ  230 (379)
T ss_dssp             HHHHHHHHHHH-------HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHH
T ss_pred             HHHHHHHHHhc-------cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHH
Confidence            99998875442       5789999996 7999999999999999999999984 57899999999999999887662  


Q ss_pred             ccccCCCCCcccEEEeCCCCCc-ccccccccC-----CC-----------cEEEeecCCchhHHHHhhhhccccceeeEE
Q 020314          210 AALKSPSGRKYDAVINCVTGIP-WSTFEPNLG-----TT-----------GKVIDFNPSPRVLLTFAWKKLTFSKKQLVP  272 (327)
Q Consensus       210 ~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  272 (327)
                      .+.+.+.++++|++|||+|++. +..++++++     ++           |+++.+|......  ........+++++.+
T Consensus       231 ~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~~--~~~~~~~~~~~~i~g  308 (379)
T 3iup_A          231 DLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSP--TEFNRNFGMAWGMGG  308 (379)
T ss_dssp             HHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEEE--EEECCCSCSCEEEEE
T ss_pred             HHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCCc--cccccccccceEEEE
Confidence            3444555668999999999865 577777774     44           5555555443221  122344556666766


Q ss_pred             EEeC-----CCH----HHHHHHHHHHHCCceeEecceeeccccH--HHHHHHHhcCCCCccEEEeC
Q 020314          273 FSVS-----PKG----ENLDFLVKLVKEGKLKTVIDSKHSLSKA--EDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       273 ~~~~-----~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~~~--~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +...     ..+    +.++.+++++.+ .++++++++|+++++  ++||+.+.+++..||+|+++
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~  373 (379)
T 3iup_A          309 WLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINP  373 (379)
T ss_dssp             CCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEET
T ss_pred             EEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeC
Confidence            4321     122    334666677777 588899999999999  99999999999999999975

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1.3e-47  Score=342.43  Aligned_cols=298  Identities=15%  Similarity=0.167  Sum_probs=243.8

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCC-CeEEEEEeEEeeChhhHHHHhc--CCCCCCCCCC---CeeecccceEEEEe
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNK-DEALLKVEAASINPIDWKLQKG--MLRPFLPRKF---PFIPASDVAGEVIG   80 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~-~eV~V~v~~~~i~~~d~~~~~g--~~~~~~~~~~---p~~~G~e~~G~V~~   80 (327)
                      |||+++++++++   +++++.+.|+|.+ +||+|||.++|||++|++++.|  .++.   ..+   |.++|||++|+|++
T Consensus         1 MkA~~~~~~g~~---l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~---~~~~~~p~v~G~E~~G~V~~   74 (366)
T 2cdc_A            1 MKAIIVKPPNAG---VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLST---LPKGKDFLVLGHEAIGVVEE   74 (366)
T ss_dssp             CEEEEECTTSCC---CEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC----------CCSCEECCSEEEEEECS
T ss_pred             CeEEEEeCCCCc---eEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCC---CCcCCCCCcCCcceEEEEEe
Confidence            799999988763   8899999999999 9999999999999999999998  5431   245   89999999999999


Q ss_pred             cCCCCCCCCCCCEEEEEc------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314           81 LGSEVKNFKVGDKVVAVL------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP  130 (327)
Q Consensus        81 vG~~~~~~~~Gd~V~~~~------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~  130 (327)
                        ++ ++|++||||++.+                              .+|+|+||++++++.++++|++++ ++|+ ++
T Consensus        75 --~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~  149 (366)
T 2cdc_A           75 --SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LA  149 (366)
T ss_dssp             --CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GH
T ss_pred             --CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh-hc
Confidence              77 8999999999742                              469999999999999999999999 7765 67


Q ss_pred             chHHHHHHHHH--H--hhCCccCCCC--C-------CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-C---CcHHHH
Q 020314          131 CAGLTAHQALT--Q--SLGVKLDGSG--Q-------QKNILITAASGAVGLYAVQLAKLGNTHVTATCG-A---RNIELV  193 (327)
Q Consensus       131 ~~~~ta~~al~--~--~~~~~~~~~~--~-------~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~---~~~~~~  193 (327)
                      .++.|||+++.  +  ..++     +  +       |++|||+|+ |++|++++|+|+..|++|+++++ +   ++.+++
T Consensus       150 ~~~~ta~~al~~~~~~~~~~-----~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~  223 (366)
T 2cdc_A          150 QPLADIEKSIEEILEVQKRV-----PVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI  223 (366)
T ss_dssp             HHHHHHHHHHHHHHHHGGGS-----SCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH
T ss_pred             CcHHHHHHHHHhhhhcccCc-----cccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH
Confidence            88899999996  3  6677     6  7       999999997 99999999999999999999985 4   577888


Q ss_pred             HhcCCCEEEeCCCCC-c-ccccCCCCCcccEEEeCCCCC-cc-cccccccCCCcEEEeecCCchhHHHHhhhh---cccc
Q 020314          194 KSLGADEVLDYKTPD-G-AALKSPSGRKYDAVINCVTGI-PW-STFEPNLGTTGKVIDFNPSPRVLLTFAWKK---LTFS  266 (327)
Q Consensus       194 ~~lg~~~v~~~~~~~-~-~~~~~~~~~~~d~v~d~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~---~~~~  266 (327)
                      +++|++.+ | ++ + . .+.+ +. +++|++||++|.+ .+ +.++++++++|+++.+|........+....   +..+
T Consensus       224 ~~~ga~~v-~-~~-~~~~~~~~-~~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~  298 (366)
T 2cdc_A          224 EETKTNYY-N-SS-NGYDKLKD-SV-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHT  298 (366)
T ss_dssp             HHHTCEEE-E-CT-TCSHHHHH-HH-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHT
T ss_pred             HHhCCcee-c-hH-HHHHHHHH-hC-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhc
Confidence            99999988 7 54 4 2 2333 33 6799999999986 47 899999999999999986543212222233   5667


Q ss_pred             ceeeEEEEeCCCHHHHHHHHHHHHCCc------eeEecceeeccccHHHHHHHH-hcCCCCccEEEeC
Q 020314          267 KKQLVPFSVSPKGENLDFLVKLVKEGK------LKTVIDSKHSLSKAEDAWAKS-ISGRATGKIIVEP  327 (327)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~g~------l~~~~~~~~~~~~~~~a~~~~-~~~~~~gkvvv~~  327 (327)
                      ++++.+. .....++++++++++++|+      ++++++++|+++++++||+.+ .+++..||+|+++
T Consensus       299 ~~~i~g~-~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~  365 (366)
T 2cdc_A          299 NKTIIGL-VNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILW  365 (366)
T ss_dssp             TCEEEEC-CCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEEC
T ss_pred             CcEEEEe-cCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEec
Confidence            7777773 3446788999999999999      557788899999999999994 3466789999875

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=2.1e-46  Score=330.79  Aligned_cols=307  Identities=21%  Similarity=0.232  Sum_probs=249.0

Q ss_pred             CccceEEEEEecc--CCC-ccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEE
Q 020314            3 GKAVMHAVQYDSY--GGG-VAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVI   79 (327)
Q Consensus         3 ~~~~~~a~~~~~~--g~~-~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~   79 (327)
                      .+++||+|++.++  |.+ ++.+++++.+.|+|.++||+|||.++|||+.|... ..      +..+|.++|||++|+|+
T Consensus         4 ~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~------~~~~p~~~g~e~~G~Vv   76 (333)
T 1v3u_A            4 FMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-SK------RLKEGAVMMGQQVARVV   76 (333)
T ss_dssp             CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-TT------TCCTTSBCCCCEEEEEE
T ss_pred             ccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-cC------cCCCCcccccceEEEEE
Confidence            4678999999986  432 47799999999999999999999999999998732 11      13567899999999999


Q ss_pred             ecCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCC----CChhh-hcccCchHHHHHHHHHHhhCCccCCCCCC
Q 020314           80 GLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQE----VSAAE-GAGIPCAGLTAHQALTQSLGVKLDGSGQQ  154 (327)
Q Consensus        80 ~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~----~~~~~-aa~~~~~~~ta~~al~~~~~~~~~~~~~~  154 (327)
                      +.  ++++|++||||++.   |+|+||++++++.++++|++    +++++ +|++++++.|||+++.+..++     ++|
T Consensus        77 ~~--~v~~~~vGdrV~~~---g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~-----~~g  146 (333)
T 1v3u_A           77 ES--KNSAFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGV-----KGG  146 (333)
T ss_dssp             EE--SCTTSCTTCEEEEC---CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCC-----CSS
T ss_pred             ec--CCCCCCCCCEEEec---CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCC-----CCC
Confidence            94  67899999999984   89999999999999999997    88888 588999999999999777888     899


Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC-CCc-c-cccCCCCCcccEEEeCCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT-PDG-A-ALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~-~~~-~-~~~~~~~~~~d~v~d~~g~~  230 (327)
                      ++|||+|++|++|++++++++..|++|++++++ ++.+.++++|++.++|..+ .+. + +.+.+. +++|++||++|++
T Consensus       147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~  225 (333)
T 1v3u_A          147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASP-DGYDCYFDNVGGE  225 (333)
T ss_dssp             CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCT-TCEEEEEESSCHH
T ss_pred             CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhC-CCCeEEEECCChH
Confidence            999999999999999999999999999999854 6778889999999888876 442 2 222233 4799999999987


Q ss_pred             cccccccccCCCcEEEeecCCchhH------HHHhhhhccccceeeEEEEeCC-C----HHHHHHHHHHHHCCceeEecc
Q 020314          231 PWSTFEPNLGTTGKVIDFNPSPRVL------LTFAWKKLTFSKKQLVPFSVSP-K----GENLDFLVKLVKEGKLKTVID  299 (327)
Q Consensus       231 ~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~g~l~~~~~  299 (327)
                      .+..++++++++|+++.+|......      .......+.++++++.++.... .    .+.++++++++++|++++.+.
T Consensus       226 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~  305 (333)
T 1v3u_A          226 FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEH  305 (333)
T ss_dssp             HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEE
T ss_pred             HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccc
Confidence            7889999999999999998654311      0112344566777777743311 1    457788999999999987666


Q ss_pred             eeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          300 SKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       300 ~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      .+++++++++||+.+.+++..||+|+++
T Consensus       306 ~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          306 VTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             EEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             cccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            6789999999999999998899999875

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=6.7e-46  Score=329.23  Aligned_cols=313  Identities=22%  Similarity=0.301  Sum_probs=249.1

Q ss_pred             ccceEEEEEecc--CCCcc--ceEEe--eccCCC-CCCCeEEEEEeEEeeChhhHHHHhcCCCCCC-CCCCCeeecccce
Q 020314            4 KAVMHAVQYDSY--GGGVA--GLKHV--EVPVPT-PNKDEALLKVEAASINPIDWKLQKGMLRPFL-PRKFPFIPASDVA   75 (327)
Q Consensus         4 ~~~~~a~~~~~~--g~~~~--~l~~~--~~~~~~-~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~-~~~~p~~~G~e~~   75 (327)
                      |++||+|++...  +. ++  .++++  +.+.|. |.++||+|||.++|+|+.|. ...|.+.+.. ...+|.++|||++
T Consensus         2 ~~~mka~~m~a~~~~~-p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~   79 (345)
T 2j3h_A            2 TATNKQVILKDYVSGF-PTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ   79 (345)
T ss_dssp             EEEEEEEEECSCBSSS-CCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred             CccceEEEEecCCCCC-CCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence            467999999886  54 34  68888  788886 89999999999999998885 4455532110 0146889999999


Q ss_pred             EEEEe--cCCCCCCCCCCCEEEEEccCcccceeEeecCCc--eeeCCC---CCChhhhcccCchHHHHHHHHHHhhCCcc
Q 020314           76 GEVIG--LGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESL--TVARPQ---EVSAAEGAGIPCAGLTAHQALTQSLGVKL  148 (327)
Q Consensus        76 G~V~~--vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~--~~~ip~---~~~~~~aa~~~~~~~ta~~al~~~~~~~~  148 (327)
                      |++++  +|+++++|++||||++.   |+|+||+++++..  ++++|+   .++++ +|++++++.|||+++.+..++  
T Consensus        80 G~~~~GvV~~~v~~~~vGdrV~~~---g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~--  153 (345)
T 2j3h_A           80 GYGVSRIIESGHPDYKKGDLLWGI---VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSP--  153 (345)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEEE---EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCC--
T ss_pred             cceEEEEEecCCCCCCCCCEEEee---cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCC--
Confidence            99999  99999999999999975   7999999999876  999996   35555 678889999999999777888  


Q ss_pred             CCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-hcCCCEEEeCCCC-C-cccccCCCCCcccEEE
Q 020314          149 DGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-SLGADEVLDYKTP-D-GAALKSPSGRKYDAVI  224 (327)
Q Consensus       149 ~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~lg~~~v~~~~~~-~-~~~~~~~~~~~~d~v~  224 (327)
                         ++|++|||+|++|++|++++|+++..|++|++++++ ++++.++ ++|++.++|+.+. + .+.+....++++|++|
T Consensus       154 ---~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi  230 (345)
T 2j3h_A          154 ---KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYF  230 (345)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEE
T ss_pred             ---CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEE
Confidence               899999999999999999999999999999999855 6788887 7999999987653 3 2222222236799999


Q ss_pred             eCCCCCcccccccccCCCcEEEeecCCchh-----HHHHhhhhccccceeeEEEEeCC----CHHHHHHHHHHHHCCcee
Q 020314          225 NCVTGIPWSTFEPNLGTTGKVIDFNPSPRV-----LLTFAWKKLTFSKKQLVPFSVSP----KGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       225 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~  295 (327)
                      |++|++.+..++++++++|+++.+|.....     ...+....+.++++++.++....    ..+.++++++++++|+++
T Consensus       231 ~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~  310 (345)
T 2j3h_A          231 ENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKIT  310 (345)
T ss_dssp             ESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSC
T ss_pred             ECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCc
Confidence            999987788999999999999999865431     11223344556777777643221    134589999999999999


Q ss_pred             EecceeeccccHHHHHHHHhcCCCCccEEEeC
Q 020314          296 TVIDSKHSLSKAEDAWAKSISGRATGKIIVEP  327 (327)
Q Consensus       296 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  327 (327)
                      +.+..+|+++++++||+.+.+++..||+|+.+
T Consensus       311 ~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          311 YVEDVADGLEKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             CCEEEEESGGGSHHHHHHHHTTCCSSEEEEES
T ss_pred             CcccccCCHHHHHHHHHHHHcCCCceEEEEEe
Confidence            87777899999999999999999999999874

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=4e-36  Score=317.92  Aligned_cols=294  Identities=18%  Similarity=0.224  Sum_probs=235.3

Q ss_pred             ccceEEeeccCCC-CC--CCeEEEEEeEEeeChhhHHHHhcCCCCC-CC---CCCCeeecccceEEEEecCCCCCCCCCC
Q 020314           19 VAGLKHVEVPVPT-PN--KDEALLKVEAASINPIDWKLQKGMLRPF-LP---RKFPFIPASDVAGEVIGLGSEVKNFKVG   91 (327)
Q Consensus        19 ~~~l~~~~~~~~~-~~--~~eV~V~v~~~~i~~~d~~~~~g~~~~~-~~---~~~p~~~G~e~~G~V~~vG~~~~~~~~G   91 (327)
                      .+.+.+.+.+... +.  ++||+|||.++|+|+.|+++..|.++.. .+   ...|.++|+|++|+|.          +|
T Consensus      1541 l~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vG 1610 (2512)
T 2vz8_A         1541 LSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SG 1610 (2512)
T ss_dssp             TTSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TS
T ss_pred             cCceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cC
Confidence            5667787766543 33  7899999999999999999999976421 11   1346789999999872          79


Q ss_pred             CEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHH
Q 020314           92 DKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAV  171 (327)
Q Consensus        92 d~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~  171 (327)
                      |||+++...|+|++|++++++.++++|+++++++||.++++++|||+++.+.+++     ++|++|||+||+|++|++++
T Consensus      1611 drV~g~~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l-----~~Ge~VLI~gaaGgVG~aAi 1685 (2512)
T 2vz8_A         1611 RRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRM-----QPGESVLIHSGSGGVGQAAI 1685 (2512)
T ss_dssp             CCEEEECSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCC-----CTTCEEEETTTTSHHHHHHH
T ss_pred             CEEEEeecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcC-----CCCCEEEEEeCChHHHHHHH
Confidence            9999987789999999999999999999999999999999999999999888888     89999999999999999999


Q ss_pred             HHHHhCCCeEEEEecC-CcHHHHHh----cCCCEEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcE
Q 020314          172 QLAKLGNTHVTATCGA-RNIELVKS----LGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGK  244 (327)
Q Consensus       172 ~la~~~g~~v~~~~~~-~~~~~~~~----lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~  244 (327)
                      |+|++.|++|++++++ ++++++++    +|+++++++.+.+  ..+.+.++++|+|+||||++++.+..++++++++|+
T Consensus      1686 qlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr 1765 (2512)
T 2vz8_A         1686 AIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGR 1765 (2512)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEE
T ss_pred             HHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcE
Confidence            9999999999999854 67777764    7899999987765  235566778899999999998779999999999999


Q ss_pred             EEeecCCchhHHHHhhhhccccceeeEEEEe----CCCHHHHHHHH----HHHHCCceeEecceeeccccHHHHHHHHhc
Q 020314          245 VIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV----SPKGENLDFLV----KLVKEGKLKTVIDSKHSLSKAEDAWAKSIS  316 (327)
Q Consensus       245 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~g~l~~~~~~~~~~~~~~~a~~~~~~  316 (327)
                      ++.+|................+++.+.+...    ...+..++.++    +.+.+|.+++++.++|+++++++|++.+.+
T Consensus      1766 ~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~ 1845 (2512)
T 2vz8_A         1766 FLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQ 1845 (2512)
T ss_dssp             EEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHT
T ss_pred             EEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhc
Confidence            9999854322111111223345555555322    11233444444    445578898888899999999999999999


Q ss_pred             CCCCccEEEeC
Q 020314          317 GRATGKIIVEP  327 (327)
Q Consensus       317 ~~~~gkvvv~~  327 (327)
                      ++..||+|+.+
T Consensus      1846 g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1846 GKHIGKVVIQV 1856 (2512)
T ss_dssp             TCCSSEEEEEC
T ss_pred             cCccceEEEEC
Confidence            99999999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.88  E-value=2.1e-23  Score=169.96  Aligned_cols=184  Identities=23%  Similarity=0.309  Sum_probs=129.6

Q ss_pred             CceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH
Q 020314          112 SLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI  190 (327)
Q Consensus       112 ~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~  190 (327)
                      +.++++|+++++++||.+++++.|||+++.+..++     ++|++|||+||+|++|++++++++..|++|++++++ ++.
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~-----~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~   76 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRL-----SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR   76 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCC-----CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCC-----CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            46889999999999999999999999999777788     899999999999999999999999999999998865 567


Q ss_pred             HHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchh-HHHHhhhhccccc
Q 020314          191 ELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRV-LLTFAWKKLTFSK  267 (327)
Q Consensus       191 ~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~  267 (327)
                      +.++++|++.++|..+.+.  .+.+.+.++++|++||++|.+.+..++++++++|+++.+|..... ...+... ...++
T Consensus        77 ~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~  155 (198)
T 1pqw_A           77 EMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKS  155 (198)
T ss_dssp             HHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTT
T ss_pred             HHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCC
Confidence            7788899998888766542  233334445799999999977788999999999999999865421 1111111 12344


Q ss_pred             eeeEEEEe------CC--CHHHHHHHHHHHHCCceeEeccee
Q 020314          268 KQLVPFSV------SP--KGENLDFLVKLVKEGKLKTVIDSK  301 (327)
Q Consensus       268 ~~~~~~~~------~~--~~~~~~~~~~~~~~g~l~~~~~~~  301 (327)
                      +.+.++..      ..  ..+.++++++++++|++++.+.++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          156 ASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             CEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             cEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            44443211      11  146789999999999998765443

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.70  E-value=9.1e-11  Score=105.24  Aligned_cols=172  Identities=13%  Similarity=0.113  Sum_probs=119.9

Q ss_pred             CeeecccceEEEEecCCCCCCCCCCCEEEEE---------ccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHH
Q 020314           67 PFIPASDVAGEVIGLGSEVKNFKVGDKVVAV---------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAH  137 (327)
Q Consensus        67 p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~---------~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  137 (327)
                      -...|++.++.|.++|++++++.+|++++.-         ...|+++++.......++.+|+.++.+.++. ..+..++|
T Consensus        74 ~~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~  152 (404)
T 1gpj_A           74 WVKRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGS  152 (404)
T ss_dssp             EEEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHH
T ss_pred             eeecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHH
Confidence            3578999999999999999999999997321         1347788888888788888998887776654 34555777


Q ss_pred             HHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcH-HHHHhcCCCEEEeCCCCCcccccC
Q 020314          138 QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNI-ELVKSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       138 ~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~-~~~~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      .++....+.-  +..+|++|+|+| +|++|.++++.++..|+ +|+++.+. ++. ++++.+|++ ++++.+. .+..  
T Consensus       153 ~av~~a~~~~--~~l~g~~VlIiG-aG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~~l-~~~l--  225 (404)
T 1gpj_A          153 AAVELAEREL--GSLHDKTVLVVG-AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFDEL-VDHL--  225 (404)
T ss_dssp             HHHHHHHHHH--SCCTTCEEEEES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGGGH-HHHH--
T ss_pred             HHHHHHHHHh--ccccCCEEEEEC-hHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-eecHHhH-HHHh--
Confidence            7764322110  004789999999 59999999999999999 88888865 454 677888875 3333211 1111  


Q ss_pred             CCCCcccEEEeCCCCCc-cc--ccccc--c--CCCcEEEeec
Q 020314          215 PSGRKYDAVINCVTGIP-WS--TFEPN--L--GTTGKVIDFN  249 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~~--~~~~~--l--~~~G~~v~~g  249 (327)
                         .++|+|++|++... +.  ..++.  +  +++|.++.++
T Consensus       226 ---~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vd  264 (404)
T 1gpj_A          226 ---ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIID  264 (404)
T ss_dssp             ---HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEE
T ss_pred             ---cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEE
Confidence               35899999998654 32  34444  3  5566665554

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.62  E-value=4.3e-09  Score=95.66  Aligned_cols=158  Identities=15%  Similarity=0.056  Sum_probs=104.0

Q ss_pred             CCeeecccceEEEEecCCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhC
Q 020314           66 FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLG  145 (327)
Q Consensus        66 ~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~  145 (327)
                      +|..+ .++.|+|++.|.+++++.      .....|.+........+.+.+-   .    .-.++....++|+++.+..+
T Consensus       204 ~p~~~-~~i~GvveetgtGVd~l~------a~~~~Gilv~~~~~vn~sVae~---~----~r~l~~~~~s~~~g~~r~~~  269 (494)
T 3ce6_A          204 WTKIA-ESVKGVTEETTTGVLRLY------QFAAAGDLAFPAINVNDSVTKS---K----FDNKYGTRHSLIDGINRGTD  269 (494)
T ss_dssp             HHHHH-HHCCCEEECSHHHHHHHH------HHHHTTCCCSCEEECTTSHHHH---T----THHHHHHHHHHHHHHHHHHC
T ss_pred             chhhh-cCeEEEEEEeCCChhHHH------HHHHcCCEEEecCCccHHHHHH---H----HhhhhhhhhhhhHHHHhccC
Confidence            45555 899999999998887651      1112233332222211122210   0    00112233456677644432


Q ss_pred             -CccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEE
Q 020314          146 -VKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       146 -~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                       .     .+|++|+|+| .|.+|..+++.++.+|++|+++.+. .+.+.++.+|++ +++.    .+..     .++|+|
T Consensus       270 ~~-----l~GktV~IiG-~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~l----~e~l-----~~aDvV  333 (494)
T 3ce6_A          270 AL-----IGGKKVLICG-YGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVTV----EEAI-----GDADIV  333 (494)
T ss_dssp             CC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCH----HHHG-----GGCSEE
T ss_pred             CC-----CCcCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-EecH----HHHH-----hCCCEE
Confidence             3     6899999999 7999999999999999999988854 566777888885 3221    1121     368999


Q ss_pred             EeCCCCCc-cc-ccccccCCCcEEEeecCCch
Q 020314          224 INCVTGIP-WS-TFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       224 ~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~~  253 (327)
                      +++++... +. ..++.++++|+++.+|....
T Consensus       334 i~atgt~~~i~~~~l~~mk~ggilvnvG~~~~  365 (494)
T 3ce6_A          334 VTATGNKDIIMLEHIKAMKDHAILGNIGHFDN  365 (494)
T ss_dssp             EECSSSSCSBCHHHHHHSCTTCEEEECSSSGG
T ss_pred             EECCCCHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence            99999765 65 78899999999999997643

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.62  E-value=1.3e-08  Score=89.83  Aligned_cols=94  Identities=16%  Similarity=0.154  Sum_probs=68.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCE--EEeCCCCCc-ccccCCCCCcccEEEeCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADE--VLDYKTPDG-AALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~--v~~~~~~~~-~~~~~~~~~~~d~v~d~~g  228 (327)
                      ++++|+|+|+ |++|+++++.++.+|++|++++++ ++.+.+++++.+.  +++.+..+. +..     .++|++++|++
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~DvVI~~~~  239 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAV-----AEADLLIGAVL  239 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHH-----HTCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHH-----cCCCEEEECCC
Confidence            3489999995 999999999999999999988854 6777776665443  333322111 111     25899999998


Q ss_pred             CCc-------ccccccccCCCcEEEeecCCc
Q 020314          229 GIP-------WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       229 ~~~-------~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .+.       ....++.++++|++++++...
T Consensus       240 ~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~  270 (361)
T 1pjc_A          240 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQ  270 (361)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             cCCCCCCeecCHHHHhhCCCCCEEEEEecCC
Confidence            543       345678899999999998654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.49  E-value=1.8e-07  Score=83.31  Aligned_cols=139  Identities=20%  Similarity=0.125  Sum_probs=88.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEE-EeCCCC---------------C-----cc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEV-LDYKTP---------------D-----GA  210 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v-~~~~~~---------------~-----~~  210 (327)
                      ++++|+|+| +|.+|+++++.++.+|++|++.++ .++.+.++++|++.+ ++..+.               +     ..
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            689999999 799999999999999999888874 467788888998754 222110               0     00


Q ss_pred             -cccCCCCCcccEEEeCC---CCCc----ccccccccCCCcEEEeecCCchhHH--HHhhhhccccceeeEEEEeCCCHH
Q 020314          211 -ALKSPSGRKYDAVINCV---TGIP----WSTFEPNLGTTGKVIDFNPSPRVLL--TFAWKKLTFSKKQLVPFSVSPKGE  280 (327)
Q Consensus       211 -~~~~~~~~~~d~v~d~~---g~~~----~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  280 (327)
                       ..+..  .++|+|++|+   |.+.    ....++.+++++.+++++...+...  ......+..+++.+.+... ....
T Consensus       250 ~l~~~~--~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~-~p~~  326 (384)
T 1l7d_A          250 AVLKEL--VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTN-VPSR  326 (384)
T ss_dssp             HHHHHH--TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSS-GGGG
T ss_pred             HHHHHh--CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCC-Ccch
Confidence             11111  3589999999   5322    2567889999999999985432111  1122233445566655322 1223


Q ss_pred             HHHHHHHHHHCCcee
Q 020314          281 NLDFLVKLVKEGKLK  295 (327)
Q Consensus       281 ~~~~~~~~~~~g~l~  295 (327)
                      ..+.+.+++.++.++
T Consensus       327 ~~~~a~~l~~~~~~~  341 (384)
T 1l7d_A          327 VAADASPLFAKNLLN  341 (384)
T ss_dssp             GHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhHHH
Confidence            345577777766543

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.43  E-value=6.2e-07  Score=79.35  Aligned_cols=94  Identities=15%  Similarity=0.155  Sum_probs=66.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHh-cCCCEEEeCCCCC--cccccCCCCCcccEEEeCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKS-LGADEVLDYKTPD--GAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~-lg~~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g  228 (327)
                      ++++|+|+|+ |++|+++++.++.+|++|+++++. ++.+.+++ +|.+...+..+..  .+..     .++|++++|++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~-----~~~DvVi~~~g  238 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSV-----QHADLLIGAVL  238 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHH-----HHCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHH-----hCCCEEEECCC
Confidence            5689999996 999999999999999999998854 56665544 7766333322211  1122     25899999998


Q ss_pred             CCc-------ccccccccCCCcEEEeecCCc
Q 020314          229 GIP-------WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       229 ~~~-------~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .+.       ...+++.++++|++++++...
T Consensus       239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~  269 (369)
T 2eez_A          239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQ  269 (369)
T ss_dssp             -------CCSCHHHHTTSCTTCEEEECC---
T ss_pred             CCccccchhHHHHHHHhhcCCCEEEEEecCC
Confidence            542       457788999999999998654

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.16  E-value=8.6e-07  Score=79.10  Aligned_cols=96  Identities=17%  Similarity=0.193  Sum_probs=68.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEE-eCCC-------------CCc------cc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVL-DYKT-------------PDG------AA  211 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~-~~~~-------------~~~------~~  211 (327)
                      ++.+|+|+| .|.+|+.++++|+.+|++|+++++ .++++.++++|++.+. +..+             .+.      ..
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            578999999 799999999999999999888885 4677778889886542 1110             000      01


Q ss_pred             ccCCCCCcccEEEeCCCCC-----c-c-cccccccCCCcEEEeecCC
Q 020314          212 LKSPSGRKYDAVINCVTGI-----P-W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g~~-----~-~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      .+..  .++|+|+++++.+     . + ...++.+++++.+++++..
T Consensus       250 ~e~~--~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~  294 (401)
T 1x13_A          250 AAQA--KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQ  294 (401)
T ss_dssp             HHHH--HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HHHh--CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCC
Confidence            1111  2589999995321     2 3 4678899999999999854

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.14  E-value=6.8e-06  Score=68.29  Aligned_cols=103  Identities=14%  Similarity=0.074  Sum_probs=68.3

Q ss_pred             HHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHH----hcCC-CEEEeCCCCCccc
Q 020314          138 QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVK----SLGA-DEVLDYKTPDGAA  211 (327)
Q Consensus       138 ~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~----~lg~-~~v~~~~~~~~~~  211 (327)
                      +.+ ...++     +++++||..| +| .|..+..+++. +.++++++ +++..+.++    ..+. +.+-... .+  .
T Consensus        82 ~~~-~~~~~-----~~~~~vldiG-~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~-~d--~  149 (248)
T 2yvl_A           82 YIA-LKLNL-----NKEKRVLEFG-TG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFN-VD--F  149 (248)
T ss_dssp             HHH-HHTTC-----CTTCEEEEEC-CT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEEC-SC--T
T ss_pred             HHH-HhcCC-----CCCCEEEEeC-CC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEE-cC--h
Confidence            344 55566     7899999999 56 69999999998 88999998 445555443    3343 1111111 11  1


Q ss_pred             ccCC-CCCcccEEEeCCCCC--cccccccccCCCcEEEeecCCc
Q 020314          212 LKSP-SGRKYDAVINCVTGI--PWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       212 ~~~~-~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .... .+.++|+|+.+.+.+  .+..+.+.|+++|+++......
T Consensus       150 ~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~  193 (248)
T 2yvl_A          150 KDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPTA  193 (248)
T ss_dssp             TTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred             hhcccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence            1111 335799999887754  3778889999999998877643

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.13  E-value=3.8e-06  Score=74.43  Aligned_cols=92  Identities=14%  Similarity=0.210  Sum_probs=68.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHh-cCCCEEEeCCCC-C-cccccCCCCCcccEEEeCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKS-LGADEVLDYKTP-D-GAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~-lg~~~v~~~~~~-~-~~~~~~~~~~~~d~v~d~~g  228 (327)
                      ++++|+|+| .|++|+++++.++.+|++|++.++. ++.+.+++ +|.+...+.... + .+..     .++|+|++|++
T Consensus       167 ~g~~V~ViG-~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l-----~~aDvVi~~~~  240 (377)
T 2vhw_A          167 EPADVVVIG-AGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAV-----KRADLVIGAVL  240 (377)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHH-----HHCSEEEECCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHH-----cCCCEEEECCC
Confidence            688999999 5999999999999999999988854 56666655 777632222111 1 1111     25899999987


Q ss_pred             CCc-------ccccccccCCCcEEEeecC
Q 020314          229 GIP-------WSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       229 ~~~-------~~~~~~~l~~~G~~v~~g~  250 (327)
                      .+.       ....++.++++|.+++++.
T Consensus       241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             CTTSCCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             cCCCCCcceecHHHHhcCCCCcEEEEEec
Confidence            543       4567789999999999984

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.89  E-value=1.3e-05  Score=60.70  Aligned_cols=104  Identities=11%  Similarity=0.067  Sum_probs=69.7

Q ss_pred             HHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH-HHHHhcCCCEEEeCCCCCccc
Q 020314          134 LTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI-ELVKSLGADEVLDYKTPDGAA  211 (327)
Q Consensus       134 ~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~-~~~~~lg~~~v~~~~~~~~~~  211 (327)
                      ++++.++.....      ..+++|+|.| +|.+|.+.++.++..|++|++..+. ++. ++++.++.+. ....+. .+.
T Consensus         7 sv~~~a~~~~~~------~~~~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~-~~~~~~-~~~   77 (144)
T 3oj0_A            7 SIPSIVYDIVRK------NGGNKILLVG-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY-VLINDI-DSL   77 (144)
T ss_dssp             SHHHHHHHHHHH------HCCCEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE-EECSCH-HHH
T ss_pred             cHHHHHHHHHHh------ccCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce-EeecCH-HHH
Confidence            456666643332      3588999999 6999999999988889996666654 443 3567777432 222221 111


Q ss_pred             ccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314          212 LKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .     .++|+|+++++........+.+++++.+++++.+
T Consensus        78 ~-----~~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           78 I-----KNNDVIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             H-----HTCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             h-----cCCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence            1     2489999999976533334788899999998865

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.80  E-value=0.00011  Score=62.16  Aligned_cols=100  Identities=21%  Similarity=0.175  Sum_probs=64.1

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEec-CCcHHHHH----hcCC-CEEEeCCCCCccccc
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCG-ARNIELVK----SLGA-DEVLDYKTPDGAALK  213 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~-~~~~~~~~----~lg~-~~v~~~~~~~~~~~~  213 (327)
                      ...++     +++.+||-.| +|. |..+..+++..  +.++++++. ++..+.++    ..+. +.+- ....+..  .
T Consensus       106 ~~~~~-----~~~~~VLDiG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~-~~~~d~~--~  175 (277)
T 1o54_A          106 MMLDV-----KEGDRIIDTG-VGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVT-IKVRDIS--E  175 (277)
T ss_dssp             HHTTC-----CTTCEEEEEC-CTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEE-EECCCGG--G
T ss_pred             HHhCC-----CCCCEEEEEC-CcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEE-EEECCHH--H
Confidence            45556     7899999998 454 88888999885  469999984 44444443    3453 2221 1111111  1


Q ss_pred             CCCCCcccEEEeCCCCC--cccccccccCCCcEEEeecCC
Q 020314          214 SPSGRKYDAVINCVTGI--PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ......+|+|+.....+  .+..+.+.|+++|+++.....
T Consensus       176 ~~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  215 (277)
T 1o54_A          176 GFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCPT  215 (277)
T ss_dssp             CCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred             cccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            12234699999866543  367788899999999877654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.68  E-value=9.2e-05  Score=65.41  Aligned_cols=98  Identities=23%  Similarity=0.180  Sum_probs=67.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCC----C---CCcccccCCC--------
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYK----T---PDGAALKSPS--------  216 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~----~---~~~~~~~~~~--------  216 (327)
                      ++.+|+|.| .|.+|+.+++.++.+|++|++.++ .++++.++++|++.+....    +   ......+.++        
T Consensus       189 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMG-AGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            678999999 699999999999999999998884 5788888888876332100    0   0000000000        


Q ss_pred             -----CCcccEEEeCCCCC-----c--ccccccccCCCcEEEeecCC
Q 020314          217 -----GRKYDAVINCVTGI-----P--WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       217 -----~~~~d~v~d~~g~~-----~--~~~~~~~l~~~G~~v~~g~~  251 (327)
                           -.+.|+||.|+..+     .  .+..++.++++..+|+++..
T Consensus       268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d  314 (405)
T 4dio_A          268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVE  314 (405)
T ss_dssp             HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCC
Confidence                 03589999996422     1  35778899999999998743

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.62  E-value=0.00028  Score=62.57  Aligned_cols=103  Identities=16%  Similarity=0.107  Sum_probs=73.8

Q ss_pred             HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCccccc
Q 020314          135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALK  213 (327)
Q Consensus       135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~  213 (327)
                      ..+.++.+..+..    -.|++|+|.| .|.+|..+++.++.+|++|+++..+ .+...+...|.. +.+.    .+.+ 
T Consensus       205 s~~~gi~rat~~~----L~GktV~ViG-~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~-v~~L----eeal-  273 (435)
T 3gvp_A          205 SILDGLKRTTDMM----FGGKQVVVCG-YGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFR-LVKL----NEVI-  273 (435)
T ss_dssp             HHHHHHHHHHCCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCH----HHHT-
T ss_pred             HHHHHHHHhhCce----ecCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCE-eccH----HHHH-
Confidence            3455665554432    4899999999 8999999999999999999988754 444455556643 1111    1111 


Q ss_pred             CCCCCcccEEEeCCCCCc-cc-ccccccCCCcEEEeecCCc
Q 020314          214 SPSGRKYDAVINCVTGIP-WS-TFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~  252 (327)
                          ...|+++.|.|... +. ..++.+++++.++.+|...
T Consensus       274 ----~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          274 ----RQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             ----TTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred             ----hcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence                24799999988554 55 7889999999999998654

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.59  E-value=9.3e-05  Score=62.65  Aligned_cols=94  Identities=17%  Similarity=0.221  Sum_probs=64.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      +++++||..| +|+.|+.++.+++..|++|++++. ++..+.++    +.|.+.+- ....+....   ....||+|+..
T Consensus       121 ~~g~rVLDIG-cG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~-~v~gDa~~l---~d~~FDvV~~~  195 (298)
T 3fpf_A          121 RRGERAVFIG-GGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVN-VITGDETVI---DGLEFDVLMVA  195 (298)
T ss_dssp             CTTCEEEEEC-CCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEE-EEESCGGGG---GGCCCSEEEEC
T ss_pred             CCcCEEEEEC-CCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeE-EEECchhhC---CCCCcCEEEEC
Confidence            8999999999 787778888888888999999994 45554443    34543221 111111111   24679999975


Q ss_pred             CCCC----cccccccccCCCcEEEeecC
Q 020314          227 VTGI----PWSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       227 ~g~~----~~~~~~~~l~~~G~~v~~g~  250 (327)
                      ...+    .++.+.+.|+|+|+++....
T Consensus       196 a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          196 ALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             TTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            5432    37788889999999987653

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.56  E-value=5.6e-05  Score=66.21  Aligned_cols=98  Identities=21%  Similarity=0.157  Sum_probs=68.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeC---CCCC--------------cccccC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDY---KTPD--------------GAALKS  214 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~---~~~~--------------~~~~~~  214 (327)
                      ++.+|+|.| .|.+|+.+++.++.+|++|++.++ .++++.++++|++.+...   ....              ...+..
T Consensus       183 ~~~kV~ViG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLG-VGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            678999999 699999999999999999998884 478888888987643100   0000              000110


Q ss_pred             CCCCcccEEEeCCCCC-----c--ccccccccCCCcEEEeecCCc
Q 020314          215 PSGRKYDAVINCVTGI-----P--WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~-----~--~~~~~~~l~~~G~~v~~g~~~  252 (327)
                       .-..+|+||.++..+     .  ....++.+++++.+|+++...
T Consensus       262 -~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~  305 (381)
T 3p2y_A          262 -AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGET  305 (381)
T ss_dssp             -HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred             -HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCC
Confidence             014589999986321     1  357788999999999987443

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.55  E-value=0.00063  Score=61.41  Aligned_cols=101  Identities=14%  Similarity=0.037  Sum_probs=71.1

Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccC
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      .+.++.+..+..    -.|++++|+| .|++|.+.++.++..|++|+++.+. .+...+...+.+ +.+.    ...   
T Consensus       251 l~dgi~r~tg~~----L~GKtVvVtG-aGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~l----ee~---  317 (488)
T 3ond_A          251 LPDGLMRATDVM----IAGKVAVVAG-YGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTL----EDV---  317 (488)
T ss_dssp             HHHHHHHHHCCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCG----GGT---
T ss_pred             HHHHHHHHcCCc----ccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCH----HHH---
Confidence            334454544442    3789999999 5799999999999999999988754 455555555643 2111    111   


Q ss_pred             CCCCcccEEEeCCCCCc-cc-ccccccCCCcEEEeecCC
Q 020314          215 PSGRKYDAVINCVTGIP-WS-TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~  251 (327)
                        -..+|+++++.|... +. ..++.+++++.++.+|..
T Consensus       318 --~~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          318 --VSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             --TTTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             --HHhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence              135899999998654 44 478899999999999864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.54  E-value=0.00015  Score=60.90  Aligned_cols=95  Identities=18%  Similarity=0.171  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-E--eCCCCC--cc----cccCCCCCccc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-L--DYKTPD--GA----ALKSPSGRKYD  221 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~--~~~~~~--~~----~~~~~~~~~~d  221 (327)
                      +|+.+||+||++++|.+.++.+...|++|+.+.++ ++++ .++++|.... +  |-.+.+  .+    ..+..  +++|
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~--G~iD  105 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA--GRID  105 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH--SCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCCC
Confidence            78999999999999999999999999999998865 4544 4466665432 2  222221  11    11212  3599


Q ss_pred             EEEeCCCCC--------------------------cccccccccCCCcEEEeec
Q 020314          222 AVINCVTGI--------------------------PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       222 ~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g  249 (327)
                      +++++.|..                          ..+.++..|+++|++|.++
T Consensus       106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis  159 (273)
T 4fgs_A          106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG  159 (273)
T ss_dssp             EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred             EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence            999999842                          2344556788889998875

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.49  E-value=0.00018  Score=51.93  Aligned_cols=94  Identities=19%  Similarity=0.199  Sum_probs=57.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcHHHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .+.+|+|+|+ |.+|..+++.+...| .+|++++++ ++.+.+...+...+. |..+. ....+..  .++|++|++++.
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~--~~~d~vi~~~~~   79 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDE-AGLAKAL--GGFDAVISAAPF   79 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCH-HHHHHHT--TTCSEEEECSCG
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCH-HHHHHHH--cCCCEEEECCCc
Confidence            4568999997 999999999999999 688888865 555555555554322 22221 1111111  368999999974


Q ss_pred             Cc-ccccccccCCCcEEEeecC
Q 020314          230 IP-WSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       230 ~~-~~~~~~~l~~~G~~v~~g~  250 (327)
                      .. ......+...+-+++++..
T Consensus        80 ~~~~~~~~~~~~~g~~~~~~~~  101 (118)
T 3ic5_A           80 FLTPIIAKAAKAAGAHYFDLTE  101 (118)
T ss_dssp             GGHHHHHHHHHHTTCEEECCCS
T ss_pred             hhhHHHHHHHHHhCCCEEEecC
Confidence            43 2222223344445554443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.46  E-value=0.00083  Score=55.42  Aligned_cols=76  Identities=17%  Similarity=0.246  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC---cHHHHHhcCCCEEE---eCCCCCcccccCCCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR---NIELVKSLGADEVL---DYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~---~~~~~~~lg~~~v~---~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      +|+.+||+||++++|.+.++.+...|++|+...++.   ..+.+++.|.....   |-.+.. .........++|+++++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~-~v~~~~~~g~iDiLVNN   86 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPL-AAKDSFTDAGFDILVNN   86 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT-TTTTSSTTTCCCEEEEC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH-HHHHHHHhCCCCEEEEC
Confidence            789999999999999999999999999999888643   23455566654322   222222 11112223569999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        87 AGi   89 (247)
T 4hp8_A           87 AGI   89 (247)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.43  E-value=0.00027  Score=54.08  Aligned_cols=78  Identities=17%  Similarity=0.115  Sum_probs=54.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-hcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-SLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .++.+|+|.| .|.+|..+++.++..|.+|++++++ ++.+.++ ..|... +..+..+...+....-.++|+||.+++.
T Consensus        17 ~~~~~v~IiG-~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~-~~~d~~~~~~l~~~~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           17 QKSKYIVIFG-CGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFT-VVGDAAEFETLKECGMEKADMVFAFTND   94 (155)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEE-EESCTTSHHHHHTTTGGGCSEEEECSSC
T ss_pred             cCCCcEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcE-EEecCCCHHHHHHcCcccCCEEEEEeCC
Confidence            6788999999 6999999999999999999988854 5665555 566543 3322222222222223569999999997


Q ss_pred             Cc
Q 020314          230 IP  231 (327)
Q Consensus       230 ~~  231 (327)
                      +.
T Consensus        95 ~~   96 (155)
T 2g1u_A           95 DS   96 (155)
T ss_dssp             HH
T ss_pred             cH
Confidence            54

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.38  E-value=0.00043  Score=59.01  Aligned_cols=92  Identities=15%  Similarity=0.224  Sum_probs=67.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      -.+++|+|.| .|.+|.++++.++.+|++|++..+. ++.+.+.++|... ++..+. .+.+     ...|+|+.+++..
T Consensus       153 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-~~~~~l-~~~l-----~~aDvVi~~~p~~  224 (293)
T 3d4o_A          153 IHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEP-FHISKA-AQEL-----RDVDVCINTIPAL  224 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEE-EEGGGH-HHHT-----TTCSEEEECCSSC
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee-cChhhH-HHHh-----cCCCEEEECCChH
Confidence            3788999999 7999999999999999999988865 4555556677653 222110 1111     3589999999765


Q ss_pred             cc-cccccccCCCcEEEeecCC
Q 020314          231 PW-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      .+ ...++.+++++.+++++..
T Consensus       225 ~i~~~~l~~mk~~~~lin~ar~  246 (293)
T 3d4o_A          225 VVTANVLAEMPSHTFVIDLASK  246 (293)
T ss_dssp             CBCHHHHHHSCTTCEEEECSST
T ss_pred             HhCHHHHHhcCCCCEEEEecCC
Confidence            43 3567789999999999853

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.30  E-value=0.0017  Score=53.24  Aligned_cols=74  Identities=18%  Similarity=0.154  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      ++.+|||+||+|.+|..+++.+...|.+|++++++ ++.+.+...+...++..+-. ..+.+..  +++|++|++.|.
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~--~~~D~vi~~ag~   94 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE-EDFSHAF--ASIDAVVFAAGS   94 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGGGG--TTCSEEEECCCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH-HHHHHHH--cCCCEEEECCCC
Confidence            67889999999999999999988899999999965 55555555555122222111 1112212  369999999984

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.30  E-value=0.00091  Score=57.19  Aligned_cols=92  Identities=10%  Similarity=0.162  Sum_probs=67.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      -.+++|+|.| .|.+|..+++.++.+|++|++..+. ++.+.+.++|.. .++..+. .+..     ...|+|+.+++..
T Consensus       155 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~~~~l-~~~l-----~~aDvVi~~~p~~  226 (300)
T 2rir_A          155 IHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLV-PFHTDEL-KEHV-----KDIDICINTIPSM  226 (300)
T ss_dssp             STTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCE-EEEGGGH-HHHS-----TTCSEEEECCSSC
T ss_pred             CCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCe-EEchhhH-HHHh-----hCCCEEEECCChh
Confidence            3788999999 7999999999999999999988865 455555566654 2222111 1111     3589999999875


Q ss_pred             cc-cccccccCCCcEEEeecCC
Q 020314          231 PW-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      .+ ...++.+++++.+++++..
T Consensus       227 ~i~~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          227 ILNQTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             CBCHHHHTTSCTTCEEEECSST
T ss_pred             hhCHHHHHhCCCCCEEEEEeCC
Confidence            53 3567889999999999854

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.13  E-value=0.0015  Score=58.09  Aligned_cols=102  Identities=14%  Similarity=0.007  Sum_probs=72.7

Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccC
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      .+.++.+..+..    -.|++|+|.| .|.+|..+++.++.+|++|+++... .+...+...|.. +.+.    .+.+  
T Consensus       233 lvdgI~Ratg~~----L~GKTVgVIG-~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~-vv~L----eElL--  300 (464)
T 3n58_A          233 LVDGIRRGTDVM----MAGKVAVVCG-YGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFE-VVTL----DDAA--  300 (464)
T ss_dssp             HHHHHHHHHCCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCE-ECCH----HHHG--
T ss_pred             HHHHHHHhcCCc----ccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCce-eccH----HHHH--
Confidence            444555554442    4899999999 8999999999999999999988743 343444455543 2211    1122  


Q ss_pred             CCCCcccEEEeCCCCCc-c-cccccccCCCcEEEeecCCc
Q 020314          215 PSGRKYDAVINCVTGIP-W-STFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~-~~~~~~l~~~G~~v~~g~~~  252 (327)
                         ...|+|+.+++... + ...+..+++++.++.+|...
T Consensus       301 ---~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          301 ---STADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             ---GGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             ---hhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence               24799999988654 3 47889999999999998654

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=97.06  E-value=0.0032  Score=50.95  Aligned_cols=93  Identities=11%  Similarity=0.105  Sum_probs=59.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      .+.+|||+| +|.+|...++.+...|++|++++...  ..+.+...+.-..+. .......+     .++|+||-+++.+
T Consensus        30 ~gk~VLVVG-gG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~-~~~~~~dL-----~~adLVIaAT~d~  102 (223)
T 3dfz_A           30 KGRSVLVVG-GGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKR-KKVGEEDL-----LNVFFIVVATNDQ  102 (223)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEEC-SCCCGGGS-----SSCSEEEECCCCT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEE-CCCCHhHh-----CCCCEEEECCCCH
Confidence            678899999 69999999999999999999888542  333222223222322 11111111     3599999999988


Q ss_pred             cccccccccCCCcEEEeecCCc
Q 020314          231 PWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       231 ~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      ..+..+...+..|..|.+...+
T Consensus       103 ~~N~~I~~~ak~gi~VNvvD~p  124 (223)
T 3dfz_A          103 AVNKFVKQHIKNDQLVNMASSF  124 (223)
T ss_dssp             HHHHHHHHHSCTTCEEEC----
T ss_pred             HHHHHHHHHHhCCCEEEEeCCc
Confidence            7665555445578887766543

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=96.93  E-value=0.0032  Score=49.38  Aligned_cols=97  Identities=10%  Similarity=0.014  Sum_probs=64.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCC-CCCcccEEEeCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSP-SGRKYDAVINCVTG  229 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~-~~~~~d~v~d~~g~  229 (327)
                      .+++|+|.| .|.+|..+++.++.. |.+|++++++ ++.+.++..|...+. .+..+...+... +-.++|+++.++++
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~-gd~~~~~~l~~~~~~~~ad~vi~~~~~  115 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVIS-GDATDPDFWERILDTGHVKLVLLAMPH  115 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEE-CCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEE-cCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence            366899999 799999999999988 9999999854 566677777876443 222222222222 33569999999986


Q ss_pred             Cc-cc---ccccccCCCcEEEeecCC
Q 020314          230 IP-WS---TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       230 ~~-~~---~~~~~l~~~G~~v~~g~~  251 (327)
                      .. ..   ..++.+.+..+++.....
T Consensus       116 ~~~~~~~~~~~~~~~~~~~ii~~~~~  141 (183)
T 3c85_A          116 HQGNQTALEQLQRRNYKGQIAAIAEY  141 (183)
T ss_dssp             HHHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred             hHHHHHHHHHHHHHCCCCEEEEEECC
Confidence            54 22   233444555676655443

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.92  E-value=0.0065  Score=52.69  Aligned_cols=97  Identities=19%  Similarity=0.179  Sum_probs=58.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEec-CCcHHHHH----hcC-----------CCE--EEeCCCCCccc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCG-ARNIELVK----SLG-----------ADE--VLDYKTPDGAA  211 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~-~~~~~~~~----~lg-----------~~~--v~~~~~~~~~~  211 (327)
                      +++++||-.| +|. |..+..+++..|  .+|++++. ++..+.++    .++           .+.  +...+.  ...
T Consensus       104 ~~g~~VLDiG-~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~--~~~  179 (336)
T 2b25_A          104 NPGDTVLEAG-SGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI--SGA  179 (336)
T ss_dssp             CTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT--TCC
T ss_pred             CCCCEEEEeC-CCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh--HHc
Confidence            7899999998 454 888888888765  68999984 44444332    211           111  111111  111


Q ss_pred             ccCCCCCcccEEEeCCCCC--cccccccccCCCcEEEeecCCc
Q 020314          212 LKSPSGRKYDAVINCVTGI--PWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      ........+|+|+-....+  .+..+.+.|+++|+++......
T Consensus       180 ~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~  222 (336)
T 2b25_A          180 TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVNI  222 (336)
T ss_dssp             C-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred             ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence            1111224599998765543  2778889999999999776543

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=96.92  E-value=0.0051  Score=51.70  Aligned_cols=102  Identities=14%  Similarity=0.085  Sum_probs=64.3

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEec-CCcHHHHH----hc-C--CCEEEeCCCCCccc
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCG-ARNIELVK----SL-G--ADEVLDYKTPDGAA  211 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~-~~~~~~~~----~l-g--~~~v~~~~~~~~~~  211 (327)
                      ...++     +++++||-.| +| .|..+..+++..  +.++++++. ++..+.++    .. |  .+.+- ....+...
T Consensus        93 ~~~~~-----~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~-~~~~d~~~  164 (280)
T 1i9g_A           93 HEGDI-----FPGARVLEAG-AG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWR-LVVSDLAD  164 (280)
T ss_dssp             HHTTC-----CTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEE-EECSCGGG
T ss_pred             HHcCC-----CCCCEEEEEc-cc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEE-EEECchHh
Confidence            45556     7899999998 45 788888899864  569999984 44444443    22 4  22221 11111111


Q ss_pred             ccCCCCCcccEEEeCCCCC--cccccccccCCCcEEEeecCCc
Q 020314          212 LKSPSGRKYDAVINCVTGI--PWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      . ......+|+|+.....+  .+..+.+.|+++|+++......
T Consensus       165 ~-~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~  206 (280)
T 1i9g_A          165 S-ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVATV  206 (280)
T ss_dssp             C-CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred             c-CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence            1 11235699999766543  3777888999999998876553

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.92  E-value=0.0016  Score=55.11  Aligned_cols=35  Identities=17%  Similarity=0.115  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++.
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   62 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN   62 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999888899999988854

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=96.91  E-value=0.0045  Score=46.25  Aligned_cols=99  Identities=9%  Similarity=0.005  Sum_probs=66.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      +-.++|+|.| .|.+|..+++.++..|.+|++++++ ++.+.++..|...+. .+..+...++..+-..+|.++-+++.+
T Consensus         5 ~~~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~-gd~~~~~~l~~a~i~~ad~vi~~~~~~   82 (140)
T 3fwz_A            5 DICNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVL-GNAANEEIMQLAHLECAKWLILTIPNG   82 (140)
T ss_dssp             CCCSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE-SCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred             cCCCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEE-CCCCCHHHHHhcCcccCCEEEEECCCh
Confidence            3456799999 7999999999999999999999954 677777777775433 333333333333335689999999865


Q ss_pred             c----ccccccccCCCcEEEeecCCc
Q 020314          231 P----WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       231 ~----~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .    +-..++.+.+..+++......
T Consensus        83 ~~n~~~~~~a~~~~~~~~iiar~~~~  108 (140)
T 3fwz_A           83 YEAGEIVASARAKNPDIEIIARAHYD  108 (140)
T ss_dssp             HHHHHHHHHHHHHCSSSEEEEEESSH
T ss_pred             HHHHHHHHHHHHHCCCCeEEEEECCH
Confidence            4    123344556666776555443

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.91  E-value=0.0024  Score=52.50  Aligned_cols=75  Identities=23%  Similarity=0.214  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCCCCc----ccccCCCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKTPDG----AALKSPSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~----~~~~~~~~~~~d~v~d~  226 (327)
                      +++++||+||+|++|.+.++.+...|++|+++++. ++.+ ..+++....++..+-.+.    +..+  .-+++|++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~   83 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG--SVGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCCEEEEC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH--HcCCCCEEEEC
Confidence            67889999999999999999988899999998865 3433 233343223332221221    1222  12368999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        84 Ag~   86 (244)
T 3d3w_A           84 AAV   86 (244)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            984

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.90  E-value=0.0039  Score=52.90  Aligned_cols=35  Identities=17%  Similarity=0.190  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.+.
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~   80 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLD   80 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999999888899999988864

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.90  E-value=0.0016  Score=54.18  Aligned_cols=77  Identities=18%  Similarity=0.159  Sum_probs=49.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccC--CCCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKS--PSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~d~v  223 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.++ ++.+ ..+.++... .+  |-.+.+  ....+.  ..-+++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            67899999999999999999888899999999865 3433 334444332 22  222211  111110  011368999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        87 v~nAg~   92 (255)
T 4eso_A           87 HINAGV   92 (255)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.87  E-value=0.0032  Score=52.10  Aligned_cols=73  Identities=23%  Similarity=0.290  Sum_probs=49.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEE-eCCCCC-cccccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVL-DYKTPD-GAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~-~~~~~~-~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      -+++++||+||+|++|.+.++.+...|++|+.+++..  +.++.++....+ |- ..+ ....+...  ++|+++++.|.
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~D~-~~~~~~~~~~~~--~iD~lv~~Ag~   91 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE--ELLKRSGHRYVVCDL-RKDLDLLFEKVK--EVDILVLNAGG   91 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHTCSEEEECCT-TTCHHHHHHHSC--CCSEEEECCCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH--HHHHhhCCeEEEeeH-HHHHHHHHHHhc--CCCEEEECCCC
Confidence            4788999999999999999988888999999888653  333444432222 22 112 12222221  69999999984

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.87  E-value=0.003  Score=52.21  Aligned_cols=76  Identities=16%  Similarity=0.175  Sum_probs=50.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEe-CCCCC----cccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLD-YKTPD----GAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~-~~~~~----~~~~~~~~~~~~d~v~  224 (327)
                      .++++|||+||+|++|.+.++.+...|++|+.++++ ++.+ ..+.+.....+. .+-.+    .+..+..  .++|+++
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li   89 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDILV   89 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence            688999999999999999998888899999998865 3443 334444332222 12111    1222222  3699999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.|.
T Consensus        90 ~~Ag~   94 (249)
T 3f9i_A           90 CNAGI   94 (249)
T ss_dssp             ECCC-
T ss_pred             ECCCC
Confidence            99983

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.87  E-value=0.0082  Score=53.36  Aligned_cols=102  Identities=11%  Similarity=-0.000  Sum_probs=72.0

Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccC
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      .+.++.+..+..    -.|++|.|.| .|.+|...++.++.+|++|+++.+. .+...+...|....    + -.+.+  
T Consensus       197 lldgi~ratg~~----L~GktVgIiG-~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~----s-L~eal--  264 (436)
T 3h9u_A          197 LVDGIKRATDVM----IAGKTACVCG-YGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL----L-VEDVV--  264 (436)
T ss_dssp             HHHHHHHHHCCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC----C-HHHHT--
T ss_pred             HHHHHHHhcCCc----ccCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec----C-HHHHH--
Confidence            344554444432    3789999999 8999999999999999999988754 34445556665321    1 01122  


Q ss_pred             CCCCcccEEEeCCCCCc-cc-ccccccCCCcEEEeecCCc
Q 020314          215 PSGRKYDAVINCVTGIP-WS-TFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~  252 (327)
                         ...|+++.+.+... +. ..++.|+++..++.++...
T Consensus       265 ---~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg~  301 (436)
T 3h9u_A          265 ---EEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFD  301 (436)
T ss_dssp             ---TTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSSG
T ss_pred             ---hhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCCC
Confidence               24899998887644 44 7888999999999998654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.86  E-value=0.0029  Score=53.70  Aligned_cols=75  Identities=16%  Similarity=0.149  Sum_probs=50.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-E--eCCCCC--cccccCCCCCcccEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-L--DYKTPD--GAALKSPSGRKYDAVIN  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~--~~~~~~--~~~~~~~~~~~~d~v~d  225 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++ ++.+ ..+.++.... +  |-.+.+  .+..+..  .++|++++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence            68899999999999999999888899999999865 3443 3345543221 2  222211  1222222  46899999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      +.|.
T Consensus        93 nAg~   96 (291)
T 3rd5_A           93 NAGI   96 (291)
T ss_dssp             CCCC
T ss_pred             CCcC
Confidence            9984

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.86  E-value=0.0005  Score=55.99  Aligned_cols=35  Identities=9%  Similarity=0.121  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.+++.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~   39 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQ   39 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGG
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCC
Confidence            57789999999999999999888889999988754

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.84  E-value=0.0016  Score=48.70  Aligned_cols=76  Identities=16%  Similarity=0.114  Sum_probs=49.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      ++++|+|+|+ |.+|...++.+...|.+|+++++. ++.+.++..+.. ++..+..+...+....-.++|+++.+++.+
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   81 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATH-AVIANATEENELLSLGIRNFEYVIVAIGAN   81 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSE-EEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCE-EEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence            4567999995 999999999999999998888754 444444444543 332222222222222234689999999864

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.82  E-value=0.002  Score=52.94  Aligned_cols=74  Identities=14%  Similarity=0.070  Sum_probs=49.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCE-E--EeCCCCC--cccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADE-V--LDYKTPD--GAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~-v--~~~~~~~--~~~~~~~~~~~~d~v~d  225 (327)
                      -+|+++||+||++++|.+.++.+...|++|+...++ ++.+..  .+... .  .|-.+.+  .+..+..  +++|++++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDiLVN   84 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--RHPRIRREELDITDSQRLQRLFEAL--PRLDVLVN   84 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--CCTTEEEEECCTTCHHHHHHHHHHC--SCCSEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--hcCCeEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence            579999999999999999999999999999998854 333321  11111 1  1222221  1223322  35999999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      +.|.
T Consensus        85 NAGi   88 (242)
T 4b79_A           85 NAGI   88 (242)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9984

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.81  E-value=0.023  Score=47.50  Aligned_cols=96  Identities=20%  Similarity=0.160  Sum_probs=64.2

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT  206 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~  206 (327)
                      ..||....+...+ +..++.    -.|.+++|.|+++.+|..+++++...|++|+...+. ..++.              
T Consensus       140 ~~PcTp~gv~~lL-~~~~i~----l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~--------------  200 (285)
T 3l07_A          140 LESCTPKGIMTML-REYGIK----TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS--------------  200 (285)
T ss_dssp             CCCHHHHHHHHHH-HHTTCC----CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH--------------
T ss_pred             CCCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHH--------------
Confidence            3344444444445 333332    489999999977779999999999999997655432 22211              


Q ss_pred             CCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          207 PDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       207 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                          ..     +..|+++.++|.+.+ --.+.++++..++++|...
T Consensus       201 ----~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          201 ----HT-----TKADILIVAVGKPNF-ITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             ----HH-----TTCSEEEECCCCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred             ----hc-----ccCCEEEECCCCCCC-CCHHHcCCCcEEEEecccC
Confidence                11     347999999987654 2346678888999998654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.81  E-value=0.0022  Score=53.94  Aligned_cols=77  Identities=14%  Similarity=0.103  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCc----HHHH-HhcCCCEEE--eCCCCC--cccccCC--CCCc
Q 020314          153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGARN----IELV-KSLGADEVL--DYKTPD--GAALKSP--SGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~~----~~~~-~~lg~~~v~--~~~~~~--~~~~~~~--~~~~  219 (327)
                      +++++||+||+  |++|.+.++.+...|++|+.+++..+    .+.+ +..+....+  |-.+.+  ....+..  .-++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57889999998  99999999988888999999886532    2222 233422222  222221  1111100  1136


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        85 id~lv~nAg~   94 (275)
T 2pd4_A           85 LDFIVHSVAF   94 (275)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            8999999983

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.80  E-value=0.0038  Score=51.53  Aligned_cols=73  Identities=10%  Similarity=0.047  Sum_probs=48.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCC-EEEeC--CCCC--cc----cccCCCCCcccEEE
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGAD-EVLDY--KTPD--GA----ALKSPSGRKYDAVI  224 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~-~v~~~--~~~~--~~----~~~~~~~~~~d~v~  224 (327)
                      ++|||+||++++|.+.++.+...|++|+.+.++ ++.+.+.+-+.. ..+..  .+.+  .+    ..+..  +++|+++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~--g~iDiLV   80 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL--QRIDVLV   80 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH--SCCCEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc--CCCCEEE
Confidence            679999999999999999999999999998865 444444333333 22222  2211  11    11222  3599999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.|.
T Consensus        81 NNAG~   85 (247)
T 3ged_A           81 NNACR   85 (247)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99974

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.80  E-value=0.023  Score=47.42  Aligned_cols=77  Identities=17%  Similarity=0.118  Sum_probs=56.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      -.|++++|.|+++.+|..++.++...|++|+...+. +.++.                  ..     +..|+++.++|.+
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~~------------------~~-----~~ADIVI~Avg~p  214 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL------------------YT-----RQADLIIVAAGCV  214 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH------------------HH-----TTCSEEEECSSCT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHHH------------------Hh-----hcCCEEEECCCCC
Confidence            489999999987779999999999999997766532 22221                  11     3479999999876


Q ss_pred             cccccccccCCCcEEEeecCCc
Q 020314          231 PWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       231 ~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .+ --.+.++++..++++|...
T Consensus       215 ~~-I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          215 NL-LRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             TC-BCGGGSCTTEEEEECCCEE
T ss_pred             Cc-CCHHHcCCCeEEEEeccCc
Confidence            54 2346678888899998653

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.77  E-value=0.0038  Score=51.77  Aligned_cols=74  Identities=15%  Similarity=0.223  Sum_probs=50.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEEE---eCCCCC--c----ccccCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEVL---DYKTPD--G----AALKSPSGR  218 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v~---~~~~~~--~----~~~~~~~~~  218 (327)
                      +|+.+||+||++++|.+.++.+...|++|+.+.++ ++.+    .++..|.....   |-.+.+  .    +..+..  +
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~--G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY--S   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH--S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc--C
Confidence            68899999999999999998888999999988865 3332    33455654322   222221  1    111222  3


Q ss_pred             cccEEEeCCC
Q 020314          219 KYDAVINCVT  228 (327)
Q Consensus       219 ~~d~v~d~~g  228 (327)
                      ++|+++++.|
T Consensus        84 ~iDiLVNNAG   93 (254)
T 4fn4_A           84 RIDVLCNNAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            5999999998

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.77  E-value=0.0046  Score=52.58  Aligned_cols=35  Identities=14%  Similarity=0.161  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.+.
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~   82 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLP   82 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999999888899999988754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.72  E-value=0.006  Score=51.20  Aligned_cols=77  Identities=17%  Similarity=0.231  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHH----HHHhcCCCEE-E--eCCCCC--cccccCC--CCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIE----LVKSLGADEV-L--DYKTPD--GAALKSP--SGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~----~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~  219 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+.  ++.+    .++..+.... +  |-.+.+  .+.++..  .-++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            68899999999999999999888899999988643  2222    2234454422 2  222211  1111100  1135


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus       110 iD~lvnnAg~  119 (271)
T 3v2g_A          110 LDILVNSAGI  119 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999984

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.72  E-value=0.032  Score=46.57  Aligned_cols=95  Identities=21%  Similarity=0.153  Sum_probs=64.7

Q ss_pred             cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCC
Q 020314          129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTP  207 (327)
Q Consensus       129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~  207 (327)
                      .||....+...| +..++.    -.|++++|.|.++.+|..++.++...|++|+...+. ..++.               
T Consensus       141 ~PcTp~gv~~lL-~~~~i~----l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~---------------  200 (286)
T 4a5o_A          141 RPCTPKGIMTLL-ASTGAD----LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLAD---------------  200 (286)
T ss_dssp             CCHHHHHHHHHH-HHTTCC----CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHH---------------
T ss_pred             CCCCHHHHHHHH-HHhCCC----CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHH---------------
Confidence            344444444445 333442    489999999987789999999999999998876532 22221               


Q ss_pred             CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                         ..     +..|+++.++|.+.+ --.+.++++..++++|...
T Consensus       201 ---~~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          201 ---HV-----SRADLVVVAAGKPGL-VKGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             ---HH-----HTCSEEEECCCCTTC-BCGGGSCTTCEEEECCSCS
T ss_pred             ---Hh-----ccCCEEEECCCCCCC-CCHHHcCCCeEEEEecccc
Confidence               01     237999999987653 2346678999999998654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.72  E-value=0.0057  Score=50.77  Aligned_cols=75  Identities=16%  Similarity=0.073  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH----HHHHhcCCCEEE---eCCCCC--c----ccccCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI----ELVKSLGADEVL---DYKTPD--G----AALKSPSGR  218 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~----~~~~~lg~~~v~---~~~~~~--~----~~~~~~~~~  218 (327)
                      +|+.+||+||++++|.+.++.+...|++|+...++ ++.    +.+++.|.+...   |-.+.+  .    +..+.  -+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~--~G   85 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE--GI   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT--TC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH--CC
Confidence            78999999999999999999999999999988854 332    233445544332   212211  1    11222  24


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      ++|+++++.|.
T Consensus        86 ~iDiLVNNAG~   96 (255)
T 4g81_D           86 HVDILINNAGI   96 (255)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            69999999984

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.70  E-value=0.0026  Score=52.57  Aligned_cols=77  Identities=17%  Similarity=0.144  Sum_probs=50.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEE---eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVL---DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~---~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.++ ++.+ ..+.++.....   |-.+.+  .+..+..  .-+++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            67899999999999999999999999999988865 3333 34455544322   111111  1111100  01359999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        85 v~nAg~   90 (247)
T 3rwb_A           85 VNNASI   90 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.70  E-value=0.013  Score=46.78  Aligned_cols=98  Identities=15%  Similarity=0.114  Sum_probs=63.6

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCC-EE--EeCCCCCccccc
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGAD-EV--LDYKTPDGAALK  213 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~-~v--~~~~~~~~~~~~  213 (327)
                      ...++     +++++||-.| +|. |..++.+++. +.+|++++. ++..+.+    +.+|.. .+  +..+.  .....
T Consensus        49 ~~l~~-----~~~~~vLDlG-cG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~--~~~~~  118 (204)
T 3njr_A           49 AALAP-----RRGELLWDIG-GGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA--PAALA  118 (204)
T ss_dssp             HHHCC-----CTTCEEEEET-CTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT--TGGGT
T ss_pred             HhcCC-----CCCCEEEEec-CCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch--hhhcc
Confidence            45556     7889999999 454 8888899988 889999984 4444433    345544 22  22211  11111


Q ss_pred             CCCCCcccEEEeCCCCC--cccccccccCCCcEEEeecCC
Q 020314          214 SPSGRKYDAVINCVTGI--PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .  ...+|+|+...+..  .+..+.+.|+++|+++.....
T Consensus       119 ~--~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~  156 (204)
T 3njr_A          119 D--LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAVT  156 (204)
T ss_dssp             T--SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEECS
T ss_pred             c--CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEecC
Confidence            1  13599999765432  366777899999999876654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.68  E-value=0.0027  Score=52.79  Aligned_cols=76  Identities=13%  Similarity=0.140  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeC--CCCC--cccccCC--CCCcccEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDY--KTPD--GAALKSP--SGRKYDAVIN  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~--~~~~--~~~~~~~--~~~~~d~v~d  225 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+.+. ++.+..+.+.. ..+..  .+.+  ....+..  .-+++|++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   83 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVN   83 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57889999999999999999888899999998865 34333444432 33322  2211  1111100  0135899999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      +.|.
T Consensus        84 ~Ag~   87 (256)
T 2d1y_A           84 NAAI   87 (256)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9984

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.68  E-value=0.029  Score=46.64  Aligned_cols=93  Identities=15%  Similarity=0.095  Sum_probs=63.4

Q ss_pred             cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCC
Q 020314          129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTP  207 (327)
Q Consensus       129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~  207 (327)
                      .||........+.+.. +      .|.+++|.|+++.+|..+++++...|++|+...+. +.++..              
T Consensus       132 ~PcTp~gv~~lL~~~~-l------~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~--------------  190 (276)
T 3ngx_A          132 VPATPRAVIDIMDYYG-Y------HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSM--------------  190 (276)
T ss_dssp             CCHHHHHHHHHHHHHT-C------CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH--------------
T ss_pred             CCCcHHHHHHHHHHhC-c------CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHh--------------
Confidence            3444444444554333 4      78999999977789999999999999998866532 222211              


Q ss_pred             CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                          .     +..|++|.++|.+.+ --.+.++++..++++|...
T Consensus       191 ----~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          191 ----T-----RSSKIVVVAVGRPGF-LNREMVTPGSVVIDVGINY  225 (276)
T ss_dssp             ----H-----HHSSEEEECSSCTTC-BCGGGCCTTCEEEECCCEE
T ss_pred             ----h-----ccCCEEEECCCCCcc-ccHhhccCCcEEEEeccCc
Confidence                1     237899999987653 2235678888999998654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.67  E-value=0.0025  Score=53.46  Aligned_cols=99  Identities=13%  Similarity=0.148  Sum_probs=61.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-C-CcH----HHHHhcCCCEE-E--eCCCCC--cccccCC--CCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-A-RNI----ELVKSLGADEV-L--DYKTPD--GAALKSP--SGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~-~~~----~~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~  218 (327)
                      -.++++||+||++++|.+.++.+...|++|+.+.+ + ++.    +.++..+.... +  |-.+.+  .+..+..  .-+
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36889999999999999999988899999998764 3 222    22334454432 2  222211  1111100  013


Q ss_pred             cccEEEeCCCCCc--------------------------ccccccccCCCcEEEeecC
Q 020314          219 KYDAVINCVTGIP--------------------------WSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       219 ~~d~v~d~~g~~~--------------------------~~~~~~~l~~~G~~v~~g~  250 (327)
                      ++|+++++.|...                          .+.++..+.++|++|.++.
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS  153 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS  153 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence            5899999998421                          1233446677899998764

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.67  E-value=0.003  Score=51.74  Aligned_cols=94  Identities=22%  Similarity=0.219  Sum_probs=60.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      +++++||..| +| .|..+..+++..+.+|++++. ++..+.+    +..+...+- ....+. .........+|+|+.+
T Consensus        90 ~~~~~vLdiG-~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~~d~-~~~~~~~~~fD~Ii~~  165 (235)
T 1jg1_A           90 KPGMNILEVG-TG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVH-VILGDG-SKGFPPKAPYDVIIVT  165 (235)
T ss_dssp             CTTCCEEEEC-CT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEE-EEESCG-GGCCGGGCCEEEEEEC
T ss_pred             CCCCEEEEEe-CC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcE-EEECCc-ccCCCCCCCccEEEEC
Confidence            7889999999 45 788889999877688999984 4444433    334543321 111111 1111122359999987


Q ss_pred             CCCCc-ccccccccCCCcEEEeec
Q 020314          227 VTGIP-WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       227 ~g~~~-~~~~~~~l~~~G~~v~~g  249 (327)
                      ..-.. ...+.+.|+++|+++..-
T Consensus       166 ~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          166 AGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             SBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CcHHHHHHHHHHhcCCCcEEEEEE
Confidence            76444 567788999999987643

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.66  E-value=0.0049  Score=50.62  Aligned_cols=74  Identities=20%  Similarity=0.154  Sum_probs=48.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCCCCc----ccccCCCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKTPDG----AALKSPSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~----~~~~~~~~~~~d~v~d~  226 (327)
                      +++++||+||+|++|...++.+...|++|+++++. ++.+ ..+.+.....+..+-.+.    +..+  .-+++|+++++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~   83 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG--GIGPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT--TCCCCSEEEEC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH--HcCCCCEEEEC
Confidence            67889999999999999999888899999998865 3333 223332222332221121    1222  12358999999


Q ss_pred             CC
Q 020314          227 VT  228 (327)
Q Consensus       227 ~g  228 (327)
                      .|
T Consensus        84 Ag   85 (244)
T 1cyd_A           84 AA   85 (244)
T ss_dssp             CC
T ss_pred             Cc
Confidence            98

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.65  E-value=0.0028  Score=52.36  Aligned_cols=77  Identities=19%  Similarity=0.272  Sum_probs=49.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-EeCCCCC--cccccC--CCCCcccEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-LDYKTPD--GAALKS--PSGRKYDAVIN  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~~~~~~~--~~~~~~--~~~~~~d~v~d  225 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++ ++.+ ..+.++...+ .|-.+.+  .+..+.  ..-+++|++++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            56789999999999999999888899999998865 3433 3345553221 1222221  111110  00135899999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      +.|.
T Consensus        84 ~Ag~   87 (245)
T 1uls_A           84 YAGI   87 (245)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9983

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.64  E-value=0.0012  Score=55.06  Aligned_cols=36  Identities=33%  Similarity=0.292  Sum_probs=33.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.+.+
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~   45 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARAR   45 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCc
Confidence            789999999999999999999999999999988653

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.62  E-value=0.0062  Score=50.81  Aligned_cols=36  Identities=8%  Similarity=0.162  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCC
Q 020314          153 QQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       153 ~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      +++++||+||+|  |+|.+.++.+...|++|+.+.+.+
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~   43 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE   43 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence            678999999994  599999988888899999888653

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=96.58  E-value=0.0026  Score=53.17  Aligned_cols=94  Identities=16%  Similarity=0.096  Sum_probs=64.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHHhcCCC-EEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVKSLGAD-EVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .++.+||..| +|. |..+..+++.. |.++++++. ++..+.+++.+.. .++..+...   .. ...+.+|+|+....
T Consensus        84 ~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~---~~-~~~~~fD~v~~~~~  157 (269)
T 1p91_A           84 DKATAVLDIG-CGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHR---LP-FSDTSMDAIIRIYA  157 (269)
T ss_dssp             TTCCEEEEET-CTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTS---CS-BCTTCEEEEEEESC
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhh---CC-CCCCceeEEEEeCC
Confidence            4678999999 566 98899999986 679999984 4566666655433 222222111   11 12346999997555


Q ss_pred             CCcccccccccCCCcEEEeecCC
Q 020314          229 GIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       229 ~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ...+..+.+.|+++|+++.....
T Consensus       158 ~~~l~~~~~~L~pgG~l~~~~~~  180 (269)
T 1p91_A          158 PCKAEELARVVKPGGWVITATPG  180 (269)
T ss_dssp             CCCHHHHHHHEEEEEEEEEEEEC
T ss_pred             hhhHHHHHHhcCCCcEEEEEEcC
Confidence            55588889999999999877543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.56  E-value=0.0029  Score=52.94  Aligned_cols=77  Identities=14%  Similarity=0.178  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-E--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-L--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.+. ++.+ ..+.++.... +  |-.+.+  ....+..  .-+++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            67899999999999999999988999999988865 3433 3455665432 2  222211  1111100  11369999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus       106 vnnAg~  111 (266)
T 3grp_A          106 VNNAGI  111 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.56  E-value=0.04  Score=46.41  Aligned_cols=96  Identities=20%  Similarity=0.247  Sum_probs=64.0

Q ss_pred             cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCC
Q 020314          129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTP  207 (327)
Q Consensus       129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~  207 (327)
                      .||....+...| +..++.    -.|.+++|.|+++.+|..++.++...|++|+...+ +..+++.+.            
T Consensus       145 ~PcTp~gv~~lL-~~~~i~----l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l~~~------------  207 (300)
T 4a26_A          145 TPCTAKGVIVLL-KRCGIE----MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDMIDY------------  207 (300)
T ss_dssp             CCHHHHHHHHHH-HHHTCC----CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHHHHH------------
T ss_pred             CCCCHHHHHHHH-HHcCCC----CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchhhhh------------
Confidence            444444444455 333442    48999999997777999999999999999876654 232221010            


Q ss_pred             CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314          208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                          .     +.+|++|.++|.+.+ --.+.++++..++++|..
T Consensus       208 ----~-----~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          208 ----L-----RTADIVIAAMGQPGY-VKGEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             ----H-----HTCSEEEECSCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred             ----h-----ccCCEEEECCCCCCC-CcHHhcCCCcEEEEEecc
Confidence                0     237899999987653 223567888899998854

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.54  E-value=0.0036  Score=51.93  Aligned_cols=77  Identities=16%  Similarity=0.129  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHH---HhcCCCEE-E--eCCCCC--cccccCC--CCCcccE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELV---KSLGADEV-L--DYKTPD--GAALKSP--SGRKYDA  222 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~---~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~~d~  222 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++....+..   +..+.... +  |-.+.+  ....+..  .-+++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            56789999999999999999888899999998865433222   23343322 2  222211  1111100  0126899


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus        83 lv~~Ag~   89 (255)
T 2q2v_A           83 LVNNAGI   89 (255)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999883

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.54  E-value=0.0082  Score=44.72  Aligned_cols=76  Identities=20%  Similarity=0.147  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      ...+++|.| .|.+|...++.+...|.+|++++++ ++.+.++..+... +..+..+...++..+-.++|.++.++++.
T Consensus         5 ~~~~v~I~G-~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~-~~gd~~~~~~l~~~~~~~~d~vi~~~~~~   81 (141)
T 3llv_A            5 GRYEYIVIG-SEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDA-VIADPTDESFYRSLDLEGVSAVLITGSDD   81 (141)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEE-EECCTTCHHHHHHSCCTTCSEEEECCSCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcE-EECCCCCHHHHHhCCcccCCEEEEecCCH
Confidence            345799999 5999999999999999999999855 5666666666543 32332222222222335689999999854

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.54  E-value=0.0056  Score=50.23  Aligned_cols=75  Identities=16%  Similarity=0.183  Sum_probs=47.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEE-EeCCCCC-cccccCC--CCCcccEEEeCCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEV-LDYKTPD-GAALKSP--SGRKYDAVINCVTG  229 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v-~~~~~~~-~~~~~~~--~~~~~d~v~d~~g~  229 (327)
                      ++++||+||+|++|.+.++.+...|++|+.++++... ..+.++...+ .|-.+.+ ....+..  .-+++|+++++.|.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~Ag~   80 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE-AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAAV   80 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            4679999999999999999888899999998865432 3344453221 2322322 1111100  01358999999984

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.53  E-value=0.0073  Score=50.22  Aligned_cols=77  Identities=17%  Similarity=0.181  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccC--CCCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKS--PSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~d~v  223 (327)
                      +++++||+||++++|.+.++.+...|++|+.++++ ++.+ ..+.++... .+  |-.+.+  ....+.  ..-+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            67899999999999999998888889999988865 3333 344555432 22  222221  111110  011369999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.53  E-value=0.0055  Score=50.99  Aligned_cols=75  Identities=9%  Similarity=0.067  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH---HHHhcCCC-EEE--eCCCCC--c----ccccCCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE---LVKSLGAD-EVL--DYKTPD--G----AALKSPSGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~---~~~~lg~~-~v~--~~~~~~--~----~~~~~~~~~~  219 (327)
                      +|+.+||+||++++|.+.++.+...|++|+...+. ++.+   .+.+.+.. ..+  |-.+.+  .    +..+..  ++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~--G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF--GR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh--CC
Confidence            78999999999999999998888899999988854 3433   22333433 222  222221  1    111222  35


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        84 iDiLVNnAGi   93 (258)
T 4gkb_A           84 LDGLVNNAGV   93 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.51  E-value=0.0076  Score=49.20  Aligned_cols=34  Identities=18%  Similarity=0.111  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++||+||++++|.+.++.+...|++|+.++++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~   35 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARS   35 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999988865

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.48  E-value=0.0088  Score=47.81  Aligned_cols=98  Identities=18%  Similarity=0.131  Sum_probs=62.1

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCCEEEeCCCCCcccccCCC
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGADEVLDYKTPDGAALKSPS  216 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~  216 (327)
                      ...++     +++++||-.| +| .|..+..+++. +.+|++++. ++..+.+    +..+...+--...+.....  ..
T Consensus        71 ~~l~~-----~~~~~vLdiG-~G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~  140 (210)
T 3lbf_A           71 ELLEL-----TPQSRVLEIG-TG-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW--QA  140 (210)
T ss_dssp             HHTTC-----CTTCEEEEEC-CT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC--GG
T ss_pred             HhcCC-----CCCCEEEEEc-CC-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC--cc
Confidence            45555     7899999999 44 58888888888 789999984 4444433    3445432211111111111  12


Q ss_pred             CCcccEEEeCCCCCc-ccccccccCCCcEEEeec
Q 020314          217 GRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       217 ~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g  249 (327)
                      ...||+|+.+..-+. ...+.+.|+++|+++..-
T Consensus       141 ~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~  174 (210)
T 3lbf_A          141 RAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPV  174 (210)
T ss_dssp             GCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred             CCCccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence            357999998766444 557788999999987653

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.48  E-value=0.013  Score=50.64  Aligned_cols=36  Identities=22%  Similarity=0.174  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~   44 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS   44 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            467889999999999999998888889999999865

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.48  E-value=0.0051  Score=50.73  Aligned_cols=75  Identities=17%  Similarity=0.123  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEE--eCCCCC--cccccCCCCCcccEEEeCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVL--DYKTPD--GAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~--~~~~~~--~~~~~~~~~~~~d~v~d~~  227 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++ ++.+.+.++.....+  |-.+.+  .+..+..  +++|+++++.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~lv~~A   82 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV--ERLDVLFNVA   82 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC--SCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHh--CCCCEEEECC
Confidence            57889999999999999999888899999998865 333322233211222  222211  1111111  3689999999


Q ss_pred             CC
Q 020314          228 TG  229 (327)
Q Consensus       228 g~  229 (327)
                      |.
T Consensus        83 g~   84 (246)
T 2ag5_A           83 GF   84 (246)
T ss_dssp             CC
T ss_pred             cc
Confidence            84

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.48  E-value=0.0038  Score=52.39  Aligned_cols=77  Identities=14%  Similarity=0.100  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeC--CCCC--cccccCC--CCCcccEEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDY--KTPD--GAALKSP--SGRKYDAVI  224 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~--~~~~--~~~~~~~--~~~~~d~v~  224 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++. ++.+ ..+.+.....+..  .+.+  ....+..  .-+++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57889999999999999999888899999998865 3333 3334432222222  2211  1111100  013589999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.|.
T Consensus        88 ~nAg~   92 (270)
T 1yde_A           88 NNAGH   92 (270)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99974

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.46  E-value=0.05  Score=45.78  Aligned_cols=77  Identities=16%  Similarity=0.096  Sum_probs=56.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      -.|.+++|.|++..+|.-+++++...|++|+...+. +.++                  +..     +.+|+||.++|.+
T Consensus       163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~------------------~~~-----~~ADIVI~Avg~p  219 (301)
T 1a4i_A          163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD------------------EEV-----NKGDILVVATGQP  219 (301)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH------------------HHH-----TTCSEEEECCCCT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHH------------------HHh-----ccCCEEEECCCCc
Confidence            478999999976679999999999999998866422 2221                  111     3479999999977


Q ss_pred             cccccccccCCCcEEEeecCCc
Q 020314          231 PWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       231 ~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .+ --.+.++++..+|++|...
T Consensus       220 ~~-I~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          220 EM-VKGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             TC-BCGGGSCTTCEEEECCCBC
T ss_pred             cc-CCHHHcCCCcEEEEccCCC
Confidence            54 3345678999999999653

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.46  E-value=0.0045  Score=51.34  Aligned_cols=76  Identities=14%  Similarity=0.135  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCE-EE--eCCCCC--cccccC--CCCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADE-VL--DYKTPD--GAALKS--PSGRKY  220 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~  220 (327)
                      +++++||+||++++|.+.++.+...|++|+.++++ ++.+    .++..+... .+  |-.+.+  ....+.  .. +++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~i   84 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APL   84 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCc
Confidence            67889999999999999999888899999999865 4433    222334332 22  222221  111110  11 469


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |+++++.|.
T Consensus        85 d~lv~nAg~   93 (252)
T 3h7a_A           85 EVTIFNVGA   93 (252)
T ss_dssp             EEEEECCCC
T ss_pred             eEEEECCCc
Confidence            999999984

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.46  E-value=0.0046  Score=52.09  Aligned_cols=77  Identities=12%  Similarity=0.177  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-E--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-L--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||++++|.+.++.+...|++|+.+++. ++.+ ..+.++.... +  |-.+.+  .+..+..  .-+++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            67899999999999999999888899999998865 3333 3345554322 2  222211  1111110  01358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus       106 v~nAg~  111 (277)
T 4dqx_A          106 VNNAGF  111 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.45  E-value=0.013  Score=48.13  Aligned_cols=74  Identities=16%  Similarity=0.211  Sum_probs=43.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCC--CC---C--cccccCCCCCcccEEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYK--TP---D--GAALKSPSGRKYDAVI  224 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~--~~---~--~~~~~~~~~~~~d~v~  224 (327)
                      .++++||+||+|++|.+.++.+.. |++|+++.+. ++.+.+.++.....+..+  +.   .  .+..+.  -+++|+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~id~lv   80 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKN--LDHVDTLV   80 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTT--CSCCSEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHh--cCCCCEEE
Confidence            567899999999999988877765 8898888865 444444433222222111  00   0  111111  13699999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.|.
T Consensus        81 ~~Ag~   85 (245)
T 3e9n_A           81 HAAAV   85 (245)
T ss_dssp             ECC--
T ss_pred             ECCCc
Confidence            99984

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.45  E-value=0.0034  Score=52.02  Aligned_cols=36  Identities=19%  Similarity=0.120  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ..++++||+||++++|.+.++.+...|++|+.++++
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~   40 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARS   40 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            367889999999999999998888889999998865

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.45  E-value=0.0033  Score=52.41  Aligned_cols=77  Identities=21%  Similarity=0.190  Sum_probs=49.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-c-HHHHHhcCCCEE-EeCCCCC--cccccC--CCCCcccEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-N-IELVKSLGADEV-LDYKTPD--GAALKS--PSGRKYDAVIN  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~-~~~~~~lg~~~v-~~~~~~~--~~~~~~--~~~~~~d~v~d  225 (327)
                      +++++||+||++++|.+.++.+...|++|+.+++.+ + .+.++..+...+ .|-.+.+  ....+.  ..-+++|++++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            567899999999999999998888899999998653 3 234445554322 1222221  111110  01136999999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      +.|.
T Consensus       106 nAg~  109 (260)
T 3gem_A          106 NASE  109 (260)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9984

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.43  E-value=0.0039  Score=51.80  Aligned_cols=76  Identities=17%  Similarity=0.197  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEE-E--eCCCCC--cccccC-CCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEV-L--DYKTPD--GAALKS-PSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v-~--~~~~~~--~~~~~~-~~~~~~d~v~d~  226 (327)
                      +++++||+||++++|.+.++.+...|++|+.+++.. .+..+.++.... +  |-.+.+  ....+. ..-+++|+++++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~n   86 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG-EDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNC   86 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC-HHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch-HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence            577899999999999999988888899999888632 233444554322 2  222221  111110 001369999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        87 Ag~   89 (257)
T 3tl3_A           87 AGT   89 (257)
T ss_dssp             GGG
T ss_pred             CCC
Confidence            983

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.43  E-value=0.0048  Score=51.84  Aligned_cols=37  Identities=16%  Similarity=0.143  Sum_probs=32.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN  189 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~  189 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.+.++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~   66 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG   66 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH
Confidence            6889999999999999999888889999998886543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.42  E-value=0.004  Score=52.26  Aligned_cols=77  Identities=21%  Similarity=0.219  Sum_probs=50.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-E--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-L--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      .++++||+||++++|.+.++.+...|++|+.++++ ++.+ ..+.++.... +  |-.+.+  .+..+..  .-+++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            67899999999999999999888899999998854 4543 3445554322 2  222221  1111100  11358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        90 v~nAg~   95 (271)
T 3tzq_B           90 DNNAAH   95 (271)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.42  E-value=0.0042  Score=51.55  Aligned_cols=77  Identities=16%  Similarity=0.130  Sum_probs=49.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++. ++.+ ..+.++... .+  |-.+.+  ....+..  .-+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57889999999999999999888899999998865 3333 334454322 12  222211  1111100  01258999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        84 v~nAg~   89 (254)
T 1hdc_A           84 VNNAGI   89 (254)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.39  E-value=0.0052  Score=50.34  Aligned_cols=74  Identities=18%  Similarity=0.171  Sum_probs=45.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC-CcHHHHHhcCCCEE-EeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT--HVTATCGA-RNIELVKSLGADEV-LDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      ++.+|||+||+|++|...++.+...|+  +|+++++. ++.+....-+...+ .|..+.+ .+.+..  .++|++|++.|
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~--~~~d~vi~~ag   93 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD-DYASAF--QGHDVGFCCLG   93 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGG-GGGGGG--SSCSEEEECCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHH-HHHHHh--cCCCEEEECCC
Confidence            356899999999999999988888898  99999864 33221111111111 1222111 111111  26899999998


Q ss_pred             C
Q 020314          229 G  229 (327)
Q Consensus       229 ~  229 (327)
                      .
T Consensus        94 ~   94 (242)
T 2bka_A           94 T   94 (242)
T ss_dssp             C
T ss_pred             c
Confidence            5

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.39  E-value=0.0052  Score=51.15  Aligned_cols=35  Identities=17%  Similarity=0.132  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRN   40 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999998888889999998865

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.38  E-value=0.0064  Score=50.59  Aligned_cols=77  Identities=18%  Similarity=0.139  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||+|++|.+.++.+...|++|+++++. ++.+ ..+.++... .+  |-.+.+  .+..+..  .-+++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            57889999999999999999888899999999864 4443 334555432 22  222211  1111100  01258999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      |++.|.
T Consensus        91 i~~Ag~   96 (265)
T 2o23_A           91 VNCAGI   96 (265)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999884

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.38  E-value=0.0058  Score=51.40  Aligned_cols=77  Identities=18%  Similarity=0.177  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCC-EEE--eCCCCC--cccccCC--CCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGAD-EVL--DYKTPD--GAALKSP--SGRKY  220 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~-~v~--~~~~~~--~~~~~~~--~~~~~  220 (327)
                      .++++||+||++++|.+.++.+...|++|+.+++. ++.+    .++..+.. ..+  |-.+.+  .+..+..  .-+++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            67899999999999999998888899999998864 3332    22333432 222  222221  1111110  01359


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |+++++.|.
T Consensus       111 D~lvnnAg~  119 (276)
T 3r1i_A          111 DIAVCNAGI  119 (276)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.37  E-value=0.0039  Score=52.20  Aligned_cols=35  Identities=17%  Similarity=0.112  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|.+.++.+...|++|+.+++.
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   49 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARR   49 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            56889999999999999999888899999998865

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.37  E-value=0.0041  Score=51.65  Aligned_cols=77  Identities=19%  Similarity=0.193  Sum_probs=44.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-EEE--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-EVL--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-~v~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||++++|.+.++.+...|++|+.+++. ++.+ ..++++.. ..+  |-.+.+  .+..+..  .-+++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            67889999999999999999888899999998854 3333 33444432 222  222211  1111100  11358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        86 v~nAg~   91 (257)
T 3tpc_A           86 VNCAGT   91 (257)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.37  E-value=0.0091  Score=50.44  Aligned_cols=35  Identities=17%  Similarity=0.298  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.++++
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~   42 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKS   42 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            67899999999999999998888889999998864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.36  E-value=0.0066  Score=52.89  Aligned_cols=35  Identities=17%  Similarity=0.181  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.++++
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~   78 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKT   78 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECC
Confidence            68899999999999999999888889999998854

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.35  E-value=0.0065  Score=50.75  Aligned_cols=78  Identities=14%  Similarity=0.152  Sum_probs=49.9

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCc-HH----HHHhcCCCEEEeCC--CCC--cccccC--CCCC
Q 020314          152 GQQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGARN-IE----LVKSLGADEVLDYK--TPD--GAALKS--PSGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~~-~~----~~~~lg~~~v~~~~--~~~--~~~~~~--~~~~  218 (327)
                      .++++|||+||+  +++|.+.++.+...|++|+.+++.++ .+    +.+..+....+..+  +.+  ...++.  ..-+
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999998  99999999888889999999886532 22    22344433333222  221  111110  0113


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      ++|++|++.|.
T Consensus        92 ~id~lv~nAg~  102 (271)
T 3ek2_A           92 SLDGLVHSIGF  102 (271)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            69999999983

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.35  E-value=0.06  Score=45.03  Aligned_cols=95  Identities=19%  Similarity=0.139  Sum_probs=63.6

Q ss_pred             cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCC
Q 020314          129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTP  207 (327)
Q Consensus       129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~  207 (327)
                      .||........+ +..++.    -.|.+++|.|++..+|.-+++++...|++|+...+. +.++.               
T Consensus       139 ~PcTp~gi~~ll-~~~~i~----l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~---------------  198 (288)
T 1b0a_A          139 RPCTPRGIVTLL-ERYNID----TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH---------------  198 (288)
T ss_dssp             CCHHHHHHHHHH-HHTTCC----CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH---------------
T ss_pred             CCCcHHHHHHHH-HHcCCC----CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHH---------------
Confidence            444433444444 333432    488999999977678999999999999998876532 22211               


Q ss_pred             CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                         ..     +..|++|.++|.+.+ --.+.++++..++++|...
T Consensus       199 ---~~-----~~ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          199 ---HV-----ENADLLIVAVGKPGF-IPGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             ---HH-----HHCSEEEECSCCTTC-BCTTTSCTTCEEEECCCEE
T ss_pred             ---Hh-----ccCCEEEECCCCcCc-CCHHHcCCCcEEEEccCCc
Confidence               01     237899999987653 3334578888999998653

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.34  E-value=0.0067  Score=50.05  Aligned_cols=35  Identities=26%  Similarity=0.225  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|.+.++.+...|++|+.++++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~   40 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARR   40 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            57889999999999999998888889999998865

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.34  E-value=0.0055  Score=49.50  Aligned_cols=89  Identities=13%  Similarity=0.048  Sum_probs=55.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCCCC---
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVTGI---  230 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~~---  230 (327)
                      +|||+||+|.+|..+++.+...|.+|++++++ ++.+.+...+...+. |..+.+.   +..  .++|+||++.|..   
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~---~~~--~~~d~vi~~ag~~~~~   76 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE---ADL--DSVDAVVDALSVPWGS   76 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH---HHH--TTCSEEEECCCCCTTS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH---hhc--ccCCEEEECCccCCCc
Confidence            49999999999999999988889999999865 343333222332221 2222212   111  4689999999862   


Q ss_pred             --------cccccccccC-CCcEEEeec
Q 020314          231 --------PWSTFEPNLG-TTGKVIDFN  249 (327)
Q Consensus       231 --------~~~~~~~~l~-~~G~~v~~g  249 (327)
                              .....++.++ .++++|.++
T Consensus        77 ~~~~~n~~~~~~l~~a~~~~~~~~v~~S  104 (224)
T 3h2s_A           77 GRGYLHLDFATHLVSLLRNSDTLAVFIL  104 (224)
T ss_dssp             SCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred             chhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence                    0122333333 346888775

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.32  E-value=0.0067  Score=49.50  Aligned_cols=77  Identities=18%  Similarity=0.169  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCCCCc----ccccCC--CCCcccEEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKTPDG----AALKSP--SGRKYDAVI  224 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~----~~~~~~--~~~~~d~v~  224 (327)
                      .++++||+||+|++|...++.+...|++|++++++ ++.+ ..+.+.....+..+-.+.    +..+..  .-+++|+++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45689999999999999999888899999998865 3433 333443223332221111    111100  012589999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.|.
T Consensus        84 ~~Ag~   88 (234)
T 2ehd_A           84 NNAGV   88 (234)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99883

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.32  E-value=0.009  Score=47.97  Aligned_cols=95  Identities=18%  Similarity=0.131  Sum_probs=60.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      +++++||..| +| .|..+..+++..|  .++++++.+ +..+.++    ..+.+.+.-.........  .....+|+|+
T Consensus        76 ~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~fD~v~  151 (215)
T 2yxe_A           76 KPGMKVLEIG-TG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY--EPLAPYDRIY  151 (215)
T ss_dssp             CTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC--GGGCCEEEEE
T ss_pred             CCCCEEEEEC-CC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC--CCCCCeeEEE
Confidence            7889999999 45 5888899999876  799999844 4444333    334332211111101111  1134699999


Q ss_pred             eCCCCCc-ccccccccCCCcEEEeecC
Q 020314          225 NCVTGIP-WSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       225 d~~g~~~-~~~~~~~l~~~G~~v~~g~  250 (327)
                      .+.+-.. ...+.+.|+++|+++..-.
T Consensus       152 ~~~~~~~~~~~~~~~L~pgG~lv~~~~  178 (215)
T 2yxe_A          152 TTAAGPKIPEPLIRQLKDGGKLLMPVG  178 (215)
T ss_dssp             ESSBBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             ECCchHHHHHHHHHHcCCCcEEEEEEC
Confidence            8776444 5677889999999876543

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.32  E-value=0.019  Score=44.27  Aligned_cols=96  Identities=11%  Similarity=0.078  Sum_probs=61.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHH----hcCCC-EEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVK----SLGAD-EVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~----~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      +++++||-.| +| .|..+..+++.. +.++++++. ++..+.++    ..+.. .++ ........+... ...+|+|+
T Consensus        24 ~~~~~vldiG-~G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-~~~d~~~~~~~~-~~~~D~i~   99 (178)
T 3hm2_A           24 KPHETLWDIG-GG-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIA-VQQGAPRAFDDV-PDNPDVIF   99 (178)
T ss_dssp             CTTEEEEEES-TT-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEE-EECCTTGGGGGC-CSCCSEEE
T ss_pred             cCCCeEEEeC-CC-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEE-EecchHhhhhcc-CCCCCEEE
Confidence            7889999999 45 489999999987 568999884 44444443    44544 332 111111111111 15699999


Q ss_pred             eCCCCC---cccccccccCCCcEEEeecCC
Q 020314          225 NCVTGI---PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       225 d~~g~~---~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ......   .+..+.+.|+++|+++.....
T Consensus       100 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  129 (178)
T 3hm2_A          100 IGGGLTAPGVFAAAWKRLPVGGRLVANAVT  129 (178)
T ss_dssp             ECC-TTCTTHHHHHHHTCCTTCEEEEEECS
T ss_pred             ECCcccHHHHHHHHHHhcCCCCEEEEEeec
Confidence            766533   377888899999999876654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.31  E-value=0.0061  Score=51.09  Aligned_cols=37  Identities=19%  Similarity=0.145  Sum_probs=33.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      .++++|||+||++++|.+.++.+...|++|+.+++.+
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~   48 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDE   48 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            6899999999999999999998888999999988653

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.30  E-value=0.0074  Score=49.85  Aligned_cols=77  Identities=17%  Similarity=0.182  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHH-HHHhcCCCE-EE--eCCCCC--cccccCC--CCCcccE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIE-LVKSLGADE-VL--DYKTPD--GAALKSP--SGRKYDA  222 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~~--~~~~~d~  222 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++..  +.+ .++..+... .+  |-.+.+  .+..+..  .-+++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            578899999999999999998888999999988643  322 334455432 22  222211  1111100  0136899


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus        86 lv~nAg~   92 (249)
T 2ew8_A           86 LVNNAGI   92 (249)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.29  E-value=0.0073  Score=50.28  Aligned_cols=35  Identities=20%  Similarity=0.222  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++.
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQ   40 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            57889999999999999999888899999998865

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.28  E-value=0.0011  Score=54.36  Aligned_cols=94  Identities=15%  Similarity=0.103  Sum_probs=55.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcc-cccCCCCCcccEEEeCCCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNIELVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~-~~~~~~~~~~d~v~d~~g~~  230 (327)
                      ..+|||+||+|++|.++++.+...| ++|++++++ ++.+.....+. .++..+-.+.. +.+..  .++|++|++.+..
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~--~~~D~vv~~a~~~   99 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNS-QIIMGDVLNHAALKQAM--QGQDIVYANLTGE   99 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTE-EEEECCTTCHHHHHHHH--TTCSEEEEECCST
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCc-EEEEecCCCHHHHHHHh--cCCCEEEEcCCCC
Confidence            4679999999999999999999999 799998865 33221111111 12211111111 11111  2589999998865


Q ss_pred             cc----cccccccCC--CcEEEeecC
Q 020314          231 PW----STFEPNLGT--TGKVIDFNP  250 (327)
Q Consensus       231 ~~----~~~~~~l~~--~G~~v~~g~  250 (327)
                      ..    +.+++.++.  .+++|.++.
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~iV~iSS  125 (236)
T 3qvo_A          100 DLDIQANSVIAAMKACDVKRLIFVLS  125 (236)
T ss_dssp             THHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             chhHHHHHHHHHHHHcCCCEEEEEec
Confidence            42    234444433  368887764

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.28  E-value=0.0041  Score=52.33  Aligned_cols=35  Identities=20%  Similarity=0.265  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.++++.+...|++|++++++
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~   65 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCART   65 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECC
Confidence            56789999999999999999888889999998865

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.28  E-value=0.0041  Score=51.42  Aligned_cols=77  Identities=22%  Similarity=0.258  Sum_probs=49.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-EEE--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-EVL--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-~v~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.+. ++.+ ..+.++.. ..+  |-.+.+  ....+..  .-+++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            67899999999999999999988999999998865 3333 23333322 112  222221  1111110  11369999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        88 v~nAg~   93 (248)
T 3op4_A           88 VNNAGI   93 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.28  E-value=0.0056  Score=50.59  Aligned_cols=77  Identities=14%  Similarity=0.149  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE--EE--eCCCCC--cccccCC-CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE--VL--DYKTPD--GAALKSP-SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~--v~--~~~~~~--~~~~~~~-~~~~~d~v  223 (327)
                      +++++||+||+|++|.+.++.+...|++|+++++. ++.+ ..+.++...  .+  |-.+.+  .+..+.. .-+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            57889999999999999999888889999999865 3333 333444322  22  222211  1111100 01358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      |++.|.
T Consensus        90 i~~Ag~   95 (254)
T 2wsb_A           90 VNSAGI   95 (254)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999984

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.28  E-value=0.009  Score=50.79  Aligned_cols=77  Identities=16%  Similarity=0.114  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCC-cHH----HHHhcCCCEEEeCC--CCC--cccccCC--CCCc
Q 020314          153 QQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGAR-NIE----LVKSLGADEVLDYK--TPD--GAALKSP--SGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~~-~~~----~~~~lg~~~v~~~~--~~~--~~~~~~~--~~~~  219 (327)
                      .++++||+||+|  ++|.+.++.+...|++|+.+.+.+ ..+    ..+..+....+..+  +.+  .+..+..  .-++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            678999999987  999999988888899999988653 222    22344543333222  221  1111110  0135


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus       109 iD~lVnnAG~  118 (296)
T 3k31_A          109 LDFVVHAVAF  118 (296)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            8999999983

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.27  E-value=0.01  Score=49.27  Aligned_cols=77  Identities=21%  Similarity=0.200  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-E--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-L--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      .++++||+||++++|.+.++.+...|++|+.++++ ++.+ ..++++.... +  |-.+.+  .+..+..  .-+++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            57889999999999999998888899999999865 3433 3345554322 2  222211  1111100  01258999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        88 i~~Ag~   93 (261)
T 3n74_A           88 VNNAGI   93 (261)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999883

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.27  E-value=0.0014  Score=54.43  Aligned_cols=37  Identities=27%  Similarity=0.235  Sum_probs=31.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      +-++++||+||+|++|.+.++.+...|++|+++++..
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~   56 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRE   56 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            3467899999999999999998888999999998653

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.27  E-value=0.0075  Score=50.60  Aligned_cols=35  Identities=17%  Similarity=0.127  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   54 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN   54 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999888899999998865

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.26  E-value=0.0074  Score=51.46  Aligned_cols=77  Identities=13%  Similarity=0.089  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCE-EE--eCCCCC--cccccCC--CCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADE-VL--DYKTPD--GAALKSP--SGRKY  220 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~-v~--~~~~~~--~~~~~~~--~~~~~  220 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++ ++.+    .++..+... .+  |-.+.+  .+..+..  ..+++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            67899999999999999999888899999998865 3332    223334332 22  222221  1111110  01369


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |++|++.|.
T Consensus       110 d~lvnnAg~  118 (301)
T 3tjr_A          110 DVVFSNAGI  118 (301)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999984

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.26  E-value=0.0065  Score=49.00  Aligned_cols=70  Identities=14%  Similarity=0.191  Sum_probs=45.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|||+||+|.+|...++.+...|.+|++++++. +.+.   +....++..+-.+ .+.+...- .++|+||++.|.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~-~~~d~vi~~ag~   73 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---YNNVKAVHFDVDWTPEEMAKQL-HGMDAIINVSGS   73 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---CTTEEEEECCTTSCHHHHHTTT-TTCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---cCCceEEEecccCCHHHHHHHH-cCCCEEEECCcC
Confidence            599999999999999999999999999999653 2221   1111222222122 21111111 359999999984

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.26  E-value=0.0048  Score=51.02  Aligned_cols=73  Identities=16%  Similarity=0.114  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEE--eCCCCC--cccccC--CCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVL--DYKTPD--GAALKS--PSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~--~~~~~~--~~~~~~--~~~~~~d~v~d~  226 (327)
                      +++++||+||+|++|.+.++.+...|++|+++++....   +..+ ...+  |-.+.+  .+..+.  ..-+++|+++++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~-~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~   81 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---EQYP-FATEVMDVADAAQVAQVCQRLLAETERLDALVNA   81 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---SCCS-SEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---hcCC-ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            56789999999999999999988899999998865332   1233 2222  222221  111110  011368999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        82 Ag~   84 (250)
T 2fwm_X           82 AGI   84 (250)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            984

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.26  E-value=0.0053  Score=52.33  Aligned_cols=36  Identities=14%  Similarity=0.274  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++||+||++++|.++++.+...|++|+.++++
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~   45 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRD   45 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            467889999999999999998888889999999965

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.25  E-value=0.0053  Score=51.01  Aligned_cols=35  Identities=20%  Similarity=0.180  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.++++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   39 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRT   39 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999999888899999998865

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.25  E-value=0.033  Score=46.62  Aligned_cols=90  Identities=14%  Similarity=0.188  Sum_probs=58.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcH-HHHHhcCC--CEEEeCCCCCcccccCCCCCcccEEEeCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNI-ELVKSLGA--DEVLDYKTPDGAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~-~~~~~lg~--~~v~~~~~~~~~~~~~~~~~~~d~v~d~~  227 (327)
                      .+++++|.| +|++|.+++..+...|+ +|++..++ ++. ++++.++.  ..+...++     ..   ...+|+|++++
T Consensus       119 ~~k~~lvlG-aGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~-----l~---~~~~DivInaT  189 (272)
T 3pwz_A          119 RNRRVLLLG-AGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA-----LE---GQSFDIVVNAT  189 (272)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG-----GT---TCCCSEEEECS
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH-----hc---ccCCCEEEECC
Confidence            688999999 69999999988888997 78777765 343 35556553  12222211     11   14689999999


Q ss_pred             CCCcc----cccccccCCCcEEEeecCC
Q 020314          228 TGIPW----STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       228 g~~~~----~~~~~~l~~~G~~v~~g~~  251 (327)
                      +....    ..-.+.++++..++++-..
T Consensus       190 p~gm~~~~~~i~~~~l~~~~~V~DlvY~  217 (272)
T 3pwz_A          190 SASLTADLPPLPADVLGEAALAYELAYG  217 (272)
T ss_dssp             SGGGGTCCCCCCGGGGTTCSEEEESSCS
T ss_pred             CCCCCCCCCCCCHHHhCcCCEEEEeecC
Confidence            74321    1123467777777777544

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.24  E-value=0.0067  Score=50.46  Aligned_cols=35  Identities=17%  Similarity=0.099  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~   42 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRN   42 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999998888899999998865

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.23  E-value=0.0062  Score=51.28  Aligned_cols=77  Identities=18%  Similarity=0.203  Sum_probs=49.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccC--CCCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKS--PSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~d~v  223 (327)
                      .++++||+||+|++|.+.++.+...|++|+++++. ++.+ ....++... .+  |-.+.+  ....+.  ...+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            56789999999999999999888899999999865 4443 334554332 22  222211  111110  011358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        84 v~~Ag~   89 (281)
T 3m1a_A           84 VNNAGR   89 (281)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999984

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.23  E-value=0.0083  Score=50.44  Aligned_cols=77  Identities=13%  Similarity=0.145  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-H---HHhcCCCEE-E--eCCCCC--cccccC-CCCCccc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-L---VKSLGADEV-L--DYKTPD--GAALKS-PSGRKYD  221 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~---~~~lg~~~v-~--~~~~~~--~~~~~~-~~~~~~d  221 (327)
                      .++++||+||++++|.+.++.+...|++|+.++++ ++.+ .   ++..+.... +  |-.+.+  ....+. ...+++|
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            67899999999999999999888899999998854 3322 2   223343322 2  222222  111110 0014699


Q ss_pred             EEEeCCCC
Q 020314          222 AVINCVTG  229 (327)
Q Consensus       222 ~v~d~~g~  229 (327)
                      +++++.|.
T Consensus       112 ~lvnnAg~  119 (275)
T 4imr_A          112 ILVINASA  119 (275)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.22  E-value=0.011  Score=47.48  Aligned_cols=89  Identities=17%  Similarity=0.114  Sum_probs=56.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEE-EeCCCCCcccccCCCCCcccEEEeCCCCCc--
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEV-LDYKTPDGAALKSPSGRKYDAVINCVTGIP--  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--  231 (327)
                      +|||+||+|.+|..+++.+...|.+|+++++.. +.+.+. .+...+ .|..+.+.   +..  .++|+||++.|...  
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~---~~~--~~~d~vi~~ag~~~~~   75 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL---SDL--SDQNVVVDAYGISPDE   75 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH---HHH--TTCSEEEECCCSSTTT
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh---hhh--cCCCEEEECCcCCccc
Confidence            599999999999999999998999999999653 333322 222221 12222212   111  46899999998532  


Q ss_pred             -------ccccccccCC--CcEEEeecC
Q 020314          232 -------WSTFEPNLGT--TGKVIDFNP  250 (327)
Q Consensus       232 -------~~~~~~~l~~--~G~~v~~g~  250 (327)
                             ....++.++.  .++++.++.
T Consensus        76 ~~~~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           76 AEKHVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             TTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             cchHHHHHHHHHHHHHhcCCceEEEEec
Confidence                   1234444444  368887653

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.22  E-value=0.01  Score=50.05  Aligned_cols=77  Identities=18%  Similarity=0.159  Sum_probs=49.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-E--eCCCCC--cccccC--CCCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-L--DYKTPD--GAALKS--PSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~--~~~~~~--~~~~~~--~~~~~~d~v  223 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+. ++.+ ..+.++.... +  |-.+.+  ....+.  ..-+++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            57889999999999999999888899999998865 3433 3345544322 2  222211  111110  011368999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999984

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.22  E-value=0.0066  Score=50.72  Aligned_cols=35  Identities=11%  Similarity=0.126  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++.
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   46 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS   46 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999998888889999998865

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.21  E-value=0.0075  Score=50.77  Aligned_cols=77  Identities=14%  Similarity=0.104  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-EEE--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-EVL--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-~v~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.++ ++.+ ..++++.. ..+  |-.+.+  ....+..  .-+++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            67899999999999999998888889999998865 3333 33455543 222  222221  1111100  11358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus       108 vnnAg~  113 (277)
T 3gvc_A          108 VANAGV  113 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.21  E-value=0.011  Score=48.05  Aligned_cols=73  Identities=15%  Similarity=0.153  Sum_probs=46.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccCCCCCcccEEEeCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~~~~~~~d~v~d~~g  228 (327)
                      ++||+||++++|.+.++.+...|++|+.++++ ++.+ ..+.++... .+  |-.+.+  ....+... ..+|+++++.|
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~~d~lv~~Ag   81 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLD-SIPSTVVHSAG   81 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCS-SCCSEEEECCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHh-hcCCEEEEeCC
Confidence            59999999999999999888899999999865 4444 334554321 12  222221  11222222 23499999998


Q ss_pred             C
Q 020314          229 G  229 (327)
Q Consensus       229 ~  229 (327)
                      .
T Consensus        82 ~   82 (230)
T 3guy_A           82 S   82 (230)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.21  E-value=0.0076  Score=50.40  Aligned_cols=36  Identities=17%  Similarity=0.102  Sum_probs=32.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -+++++||+||+|++|.+.++.+...|++|+++++.
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~   54 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRN   54 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            367899999999999999999888899999998865

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.21  E-value=0.004  Score=51.94  Aligned_cols=36  Identities=17%  Similarity=0.067  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -+++++||+||+|++|.+.++.+...|++|+.++++
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~   62 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARD   62 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            367899999999999999998888889999998865

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.21  E-value=0.0075  Score=50.24  Aligned_cols=77  Identities=13%  Similarity=0.123  Sum_probs=48.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-EEE--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-EVL--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-~v~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++. ++.+ ..+.+... ..+  |-.+.+  .+..+..  .-+++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57889999999999999999888899999998865 3333 33344321 222  222211  1111100  01258999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        91 v~~Ag~   96 (263)
T 3ak4_A           91 CANAGV   96 (263)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999983

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.19  E-value=0.0058  Score=50.53  Aligned_cols=35  Identities=14%  Similarity=0.120  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.++++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~   42 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADIN   42 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence            67899999999999999999888899999998865

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.18  E-value=0.0081  Score=49.45  Aligned_cols=73  Identities=18%  Similarity=0.140  Sum_probs=46.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-e--cC-CcHH-HHHhc-CCCEEEeCCCCCc---ccccCCCCCcccEEE
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTAT-C--GA-RNIE-LVKSL-GADEVLDYKTPDG---AALKSPSGRKYDAVI  224 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~-~--~~-~~~~-~~~~l-g~~~v~~~~~~~~---~~~~~~~~~~~d~v~  224 (327)
                      ++++||+||++++|.+.++.+...|++|+.+ .  ++ ++.+ ..+.+ +. .+.+..+...   ...+..  +++|+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~--g~iD~lv   77 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHG--EAIDTIV   77 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGS--SCEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHc--CCCCEEE
Confidence            3579999999999999999888899999988 4  55 3333 33444 32 2322222111   112222  3699999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.|.
T Consensus        78 ~~Ag~   82 (244)
T 1zmo_A           78 SNDYI   82 (244)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99983

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.18  E-value=0.0052  Score=51.60  Aligned_cols=78  Identities=18%  Similarity=0.187  Sum_probs=48.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-EEE--eCCCCC--cccccC--CCCCcccE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-EVL--DYKTPD--GAALKS--PSGRKYDA  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-~v~--~~~~~~--~~~~~~--~~~~~~d~  222 (327)
                      ..++++||+||++++|.+.++.+...|++|+.++++ ++.+ ..+.++.. ..+  |-.+.+  .+..+.  ..-+++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            367889999999999999998888899999998865 3433 33455432 222  222211  111110  01136999


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus       106 lVnnAg~  112 (272)
T 4dyv_A          106 LFNNAGT  112 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.18  E-value=0.015  Score=49.46  Aligned_cols=92  Identities=15%  Similarity=0.047  Sum_probs=60.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcH-HHHHhcCCC--EEEeCCCCCcccccCCCCCcccEEEeCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNI-ELVKSLGAD--EVLDYKTPDGAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~-~~~~~lg~~--~v~~~~~~~~~~~~~~~~~~~d~v~d~~  227 (327)
                      ++++++|.| +|++|.+++..+...|+ +|++..++ ++. ++++.++..  .+.+..    ...+..  ..+|+|++|+
T Consensus       140 ~~~~vlVlG-aGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~----~~~~~~--~~aDivIn~t  212 (297)
T 2egg_A          140 DGKRILVIG-AGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLA----EAETRL--AEYDIIINTT  212 (297)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHH----HHHHTG--GGCSEEEECS
T ss_pred             CCCEEEEEC-cHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHH----HHHhhh--ccCCEEEECC
Confidence            678999999 69999999999999998 78877765 453 455666652  222111    111111  3589999999


Q ss_pred             CCCccc------ccccccCCCcEEEeecCC
Q 020314          228 TGIPWS------TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       228 g~~~~~------~~~~~l~~~G~~v~~g~~  251 (327)
                      +.....      .....++++..++++...
T Consensus       213 ~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~  242 (297)
T 2egg_A          213 SVGMHPRVEVQPLSLERLRPGVIVSDIIYN  242 (297)
T ss_dssp             CTTCSSCCSCCSSCCTTCCTTCEEEECCCS
T ss_pred             CCCCCCCCCCCCCCHHHcCCCCEEEEcCCC
Confidence            854421      123467777788887764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.17  E-value=0.007  Score=50.91  Aligned_cols=35  Identities=17%  Similarity=0.184  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|++++++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   55 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARG   55 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56789999999999999999888899999998865

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.16  E-value=0.0057  Score=51.14  Aligned_cols=77  Identities=21%  Similarity=0.248  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--cccccCC--CCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--GAALKSP--SGRKY  220 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~~  220 (327)
                      .++++||+||++++|.+.++.+...|++|+.++++ ++.+    .++..+.... +  |-.+.+  ....+..  .-+++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999888899999998865 3332    2233343322 1  222221  1111100  11359


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |+++++.|.
T Consensus        83 D~lVnnAG~   91 (264)
T 3tfo_A           83 DVLVNNAGV   91 (264)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.16  E-value=0.0065  Score=51.31  Aligned_cols=35  Identities=20%  Similarity=0.123  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.+.
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   61 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRT   61 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            67889999999999999999888899999998865

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.14  E-value=0.0081  Score=48.50  Aligned_cols=93  Identities=13%  Similarity=0.070  Sum_probs=55.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHH-hCCCeEEEEecC-C-cHHHHHhcCCC-EEEeCCCCCcc-cccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAK-LGNTHVTATCGA-R-NIELVKSLGAD-EVLDYKTPDGA-ALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~-~~g~~v~~~~~~-~-~~~~~~~lg~~-~v~~~~~~~~~-~~~~~~~~~~d~v~d~~g~  229 (327)
                      ++|||+||+|++|...++.+. ..|++|++++++ + +.+.+...+.. .++..+-.+.+ +.+..  .++|++|++.|.
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~--~~~d~vv~~ag~   83 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAV--TNAEVVFVGAME   83 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHH--TTCSEEEESCCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHH--cCCCEEEEcCCC
Confidence            469999999999999888877 899999999865 3 33333212222 22222211211 11111  258999999986


Q ss_pred             Cc--ccccccccCC--CcEEEeec
Q 020314          230 IP--WSTFEPNLGT--TGKVIDFN  249 (327)
Q Consensus       230 ~~--~~~~~~~l~~--~G~~v~~g  249 (327)
                      ..  ...+++.++.  .+++|.++
T Consensus        84 ~n~~~~~~~~~~~~~~~~~iv~iS  107 (221)
T 3r6d_A           84 SGSDMASIVKALSRXNIRRVIGVS  107 (221)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CChhHHHHHHHHHhcCCCeEEEEe
Confidence            32  2333333432  35888765

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.14  E-value=0.0061  Score=50.88  Aligned_cols=77  Identities=22%  Similarity=0.263  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++ ++.+ ..+.++... .+  |-.+.+  .+..+..  .-+.+|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            57789999999999999999888899999998865 3433 334454221 22  222211  1111100  01358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        85 vnnAg~   90 (263)
T 2a4k_A           85 AHFAGV   90 (263)
T ss_dssp             EEGGGG
T ss_pred             EECCCC
Confidence            999873

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.14  E-value=0.0077  Score=50.14  Aligned_cols=77  Identities=14%  Similarity=0.114  Sum_probs=48.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC-EEE--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD-EVL--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~-~v~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||+|++|.+.++.+...|++|+++++. ++.+ ..+.+... ..+  |-.+.+  .+..+..  .-+++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57889999999999999998888889999998865 3333 22333321 122  222211  1111100  01259999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        86 v~~Ag~   91 (260)
T 1nff_A           86 VNNAGI   91 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.14  E-value=0.0075  Score=50.80  Aligned_cols=35  Identities=14%  Similarity=0.122  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.+++.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~   43 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRC   43 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            67899999999999999999999999999988863

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.13  E-value=0.092  Score=43.72  Aligned_cols=77  Identities=19%  Similarity=0.122  Sum_probs=54.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      -.|.+++|.|++..+|..+++++...  |++|+...+. +.+.  +                ..     +.+|++|.++|
T Consensus       156 l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~--~----------------~~-----~~ADIVI~Avg  212 (281)
T 2c2x_A          156 IAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLP--A----------------LT-----RQADIVVAAVG  212 (281)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHH--H----------------HH-----TTCSEEEECSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHH--H----------------HH-----hhCCEEEECCC
Confidence            48899999997667899999999988  7888865432 2221  0                11     24789999998


Q ss_pred             CCcccccccccCCCcEEEeecCCc
Q 020314          229 GIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       229 ~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .+.+ --.+.++++..++++|.+.
T Consensus       213 ~p~~-I~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          213 VAHL-LTADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             CTTC-BCGGGSCTTCEEEECCEEE
T ss_pred             CCcc-cCHHHcCCCcEEEEccCCC
Confidence            7754 3345678888888888653

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=96.13  E-value=0.0085  Score=49.88  Aligned_cols=77  Identities=14%  Similarity=0.185  Sum_probs=47.6

Q ss_pred             CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCc----HHHH-HhcCCCEEEeC--CCCC--cccccCC--CCCc
Q 020314          153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGARN----IELV-KSLGADEVLDY--KTPD--GAALKSP--SGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~~----~~~~-~~lg~~~v~~~--~~~~--~~~~~~~--~~~~  219 (327)
                      +++++||+||+  |++|.+.++.+...|++|+.++++.+    .+.+ +..+....+..  .+.+  ....+..  .-++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57889999998  99999998888888999999886532    2222 23343333322  2211  1111100  0136


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        87 iD~lv~~Ag~   96 (261)
T 2wyu_A           87 LDYLVHAIAF   96 (261)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999983

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.13  E-value=0.0053  Score=53.35  Aligned_cols=94  Identities=16%  Similarity=0.122  Sum_probs=59.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCC-----CCc---cccc-CC-----C
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKT-----PDG---AALK-SP-----S  216 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~-----~~~---~~~~-~~-----~  216 (327)
                      -+|++|.|.| .|.+|+.+++.++.+|++|++.+.. ++.++.+.++++.+ +..+     .+.   .... ..     .
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~~  250 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVAR  250 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHHh
Confidence            4789999999 8999999999999999999966543 33556666765433 1111     000   0000 00     0


Q ss_pred             CCcccEEEeCCCCCccc-ccccccCCCcEEEe
Q 020314          217 GRKYDAVINCVTGIPWS-TFEPNLGTTGKVID  247 (327)
Q Consensus       217 ~~~~d~v~d~~g~~~~~-~~~~~l~~~G~~v~  247 (327)
                      .-+.++|+++..++... .+.+.|..+|.++.
T Consensus       251 ~lk~~iVie~AN~p~t~~eA~~~L~~~gIlv~  282 (355)
T 1c1d_A          251 TLDCSVVAGAANNVIADEAASDILHARGILYA  282 (355)
T ss_dssp             HCCCSEECCSCTTCBCSHHHHHHHHHTTCEEC
T ss_pred             hCCCCEEEECCCCCCCCHHHHHHHHhCCEEEE
Confidence            11367777777766643 66677777776654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.13  E-value=0.013  Score=49.31  Aligned_cols=78  Identities=17%  Similarity=0.216  Sum_probs=47.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--cccccCC--CCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--GAALKSP--SGRK  219 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~  219 (327)
                      ..++++||+||++++|.+.++.+...|++|+.+.+. ++.+    .++..+.... +  |-.+.+  ....+..  .-++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            467789999999999999998888889999988865 3332    2233344322 2  222211  1111100  1136


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus       102 id~lv~nAg~  111 (279)
T 3sju_A          102 IGILVNSAGR  111 (279)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            8999999984

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.12  E-value=0.064  Score=44.84  Aligned_cols=92  Identities=16%  Similarity=0.072  Sum_probs=58.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH-HHHHhcCCC-EEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI-ELVKSLGAD-EVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~-~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      ++++++|+|+ |++|.++++.+...|++|++..++ ++. ++++.++.. .+ +..+  ......   +.+|+++++++.
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~-~~~~--~~~~~~---~~~DivVn~t~~  190 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSI-QALS--MDELEG---HEFDLIINATSS  190 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSE-EECC--SGGGTT---CCCSEEEECCSC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCe-eEec--HHHhcc---CCCCEEEECCCC
Confidence            6789999995 899999999999999988887765 443 345555431 11 1111  111111   469999999985


Q ss_pred             Cccc----ccccccCCCcEEEeecCC
Q 020314          230 IPWS----TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       230 ~~~~----~~~~~l~~~G~~v~~g~~  251 (327)
                      ....    .-...++++..++++...
T Consensus       191 ~~~~~~~~i~~~~l~~~~~v~D~~y~  216 (271)
T 1nyt_A          191 GISGDIPAIPSSLIHPGIYCYDMFYQ  216 (271)
T ss_dssp             GGGTCCCCCCGGGCCTTCEEEESCCC
T ss_pred             CCCCCCCCCCHHHcCCCCEEEEeccC
Confidence            4421    112345666677777654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.11  E-value=0.0099  Score=50.59  Aligned_cols=36  Identities=17%  Similarity=0.019  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -.++++||+||++++|.+.++.+...|++|+++++.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~   61 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVC   61 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            367899999999999999999888899999988743

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.11  E-value=0.014  Score=51.78  Aligned_cols=35  Identities=20%  Similarity=0.146  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKL-GNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~-~g~~v~~~~~  186 (327)
                      +.++++||+||++|+|++.+..+.. .|++|+.+.+
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r   94 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFF   94 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEEC
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeC
Confidence            4688999999999999988877777 8999998874

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.11  E-value=0.0053  Score=51.18  Aligned_cols=35  Identities=11%  Similarity=0.220  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   43 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRS   43 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999999888899999998865

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.10  E-value=0.007  Score=50.73  Aligned_cols=35  Identities=26%  Similarity=0.219  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|...++.+...|++|+++.+.
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~   49 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIA   49 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence            57889999999999999998888889999998865

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.09  E-value=0.01  Score=49.09  Aligned_cols=36  Identities=22%  Similarity=0.233  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGAR  188 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~~  188 (327)
                      ++++++|+||+|++|.+.++.+...|++ |+.+++..
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~   40 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE   40 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCc
Confidence            5778999999999999999988889996 88777653

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.09  E-value=0.0089  Score=50.75  Aligned_cols=78  Identities=17%  Similarity=0.098  Sum_probs=48.4

Q ss_pred             CCCCeEEEEcCCCh--HHHHHHHHHHhCCCeEEEEecCCc-H----HHHHhcCCCEEEeC--CCCC--cccccCC--CCC
Q 020314          152 GQQKNILITAASGA--VGLYAVQLAKLGNTHVTATCGARN-I----ELVKSLGADEVLDY--KTPD--GAALKSP--SGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~g~--~G~~~~~la~~~g~~v~~~~~~~~-~----~~~~~lg~~~v~~~--~~~~--~~~~~~~--~~~  218 (327)
                      -+++++||+||+|+  +|.+.++.+...|++|+.+.+.++ .    ++.+..+....+..  .+.+  .+..+..  .-+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            36889999999955  999999888889999998886532 1    22234443333322  2221  1111110  113


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      ++|+++++.|.
T Consensus       109 ~iD~lVnnAG~  119 (293)
T 3grk_A          109 KLDFLVHAIGF  119 (293)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            69999999983

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.09  E-value=0.0089  Score=50.22  Aligned_cols=34  Identities=15%  Similarity=0.044  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .++++||+||++++|.+.++.+...|++|+.+++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r   43 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDI   43 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence            6789999999999999999988889999999875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.08  E-value=0.007  Score=51.42  Aligned_cols=35  Identities=11%  Similarity=0.248  Sum_probs=32.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.+++.
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~   74 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARS   74 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            67899999999999999999888899999999865

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.08  E-value=0.0084  Score=49.28  Aligned_cols=35  Identities=20%  Similarity=0.175  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|...++.+...|++|++++++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~   40 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTS   40 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999998888899999998865

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.07  E-value=0.007  Score=49.72  Aligned_cols=77  Identities=19%  Similarity=0.211  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHHHHhc-CCC-EEE--eCCCCC--ccccc----CCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIELVKSL-GAD-EVL--DYKTPD--GAALK----SPSGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~~~~l-g~~-~v~--~~~~~~--~~~~~----~~~~~~  219 (327)
                      +++++||+||+|++|.++++.+...|  ++|++++++ ++.+.+.++ +.. ..+  |..+.+  ....+    ..+..+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            35689999999999999999888889  899999865 444444444 222 122  222211  11111    111125


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|++|++.|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            8999999873

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.06  E-value=0.018  Score=49.98  Aligned_cols=35  Identities=23%  Similarity=0.133  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   58 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNF   58 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46789999999999999999988899999999864

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.06  E-value=0.013  Score=50.66  Aligned_cols=89  Identities=11%  Similarity=0.020  Sum_probs=65.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      -.|.+|.|+| .|.+|...++.++.+|++|++..+....+.+..+|....    + ..+..     ...|+|+.+++...
T Consensus       163 l~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~----~-l~ell-----~~aDvV~l~~P~t~  231 (335)
T 2g76_A          163 LNGKTLGILG-LGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQL----P-LEEIW-----PLCDFITVHTPLLP  231 (335)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEEC----C-HHHHG-----GGCSEEEECCCCCT
T ss_pred             CCcCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeC----C-HHHHH-----hcCCEEEEecCCCH
Confidence            3788999999 899999999999999999998886544445667776421    1 11222     24799999887432


Q ss_pred             -----c-cccccccCCCcEEEeecCC
Q 020314          232 -----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                           + ...++.+++++.+|.++..
T Consensus       232 ~t~~li~~~~l~~mk~gailIN~arg  257 (335)
T 2g76_A          232 STTGLLNDNTFAQCKKGVRVVNCARG  257 (335)
T ss_dssp             TTTTSBCHHHHTTSCTTEEEEECSCT
T ss_pred             HHHHhhCHHHHhhCCCCcEEEECCCc
Confidence                 2 2466789999999998864

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.06  E-value=0.01  Score=49.88  Aligned_cols=35  Identities=17%  Similarity=0.041  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   46 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLC   46 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecc
Confidence            68899999999999999999888899999988753

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.05  E-value=0.0074  Score=49.67  Aligned_cols=36  Identities=19%  Similarity=0.159  Sum_probs=32.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -+++++||+||++++|.+.++.+...|++|+.++++
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~   47 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT   47 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence            368899999999999999999888899999998865

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.05  E-value=0.012  Score=49.48  Aligned_cols=35  Identities=26%  Similarity=0.308  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.++++
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   39 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKS   39 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEecc
Confidence            67899999999999999998888899999998854

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.04  E-value=0.012  Score=51.44  Aligned_cols=35  Identities=23%  Similarity=0.179  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHh--CCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKL--GNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~--~g~~v~~~~~~  187 (327)
                      .+.+|||+||+|.+|..+++.+..  .|.+|+++++.
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~   45 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKF   45 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECC
Confidence            577899999999999999888887  89999999864

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.04  E-value=0.022  Score=47.42  Aligned_cols=76  Identities=17%  Similarity=0.215  Sum_probs=49.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--cc----cccCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--GA----ALKSPSG  217 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~----~~~~~~~  217 (327)
                      -+++++||+||++++|.+.++.+...|++|+.++++ ++.+    .++..+.... +  |-.+.+  .+    ..+..  
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   86 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY--   86 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT--
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc--
Confidence            368899999999999999998888899999998865 3332    2233343322 2  222221  11    11111  


Q ss_pred             CcccEEEeCCCC
Q 020314          218 RKYDAVINCVTG  229 (327)
Q Consensus       218 ~~~d~v~d~~g~  229 (327)
                      +++|+++++.|.
T Consensus        87 g~id~lv~nAg~   98 (264)
T 3ucx_A           87 GRVDVVINNAFR   98 (264)
T ss_dssp             SCCSEEEECCCS
T ss_pred             CCCcEEEECCCC
Confidence            369999999864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.04  E-value=0.011  Score=49.32  Aligned_cols=35  Identities=14%  Similarity=0.195  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+.
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~   44 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQ   44 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecC
Confidence            67899999999999999999999999999988743

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.04  E-value=0.012  Score=49.73  Aligned_cols=36  Identities=14%  Similarity=0.130  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      .++++||+||+  |++|.+.++.+...|++|+.++++.
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~   57 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATP   57 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH
Confidence            57789999998  9999999988888899999988653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.03  E-value=0.023  Score=46.69  Aligned_cols=77  Identities=18%  Similarity=0.179  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCE-EE--eCCCCC--cccccC--CCCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADE-VL--DYKTPD--GAALKS--PSGRKY  220 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~  220 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+. ++.+    .++..+... .+  |-.+.+  .+..+.  ...+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57789999999999999998888889999998865 3322    223344432 22  222211  111110  112469


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |+++++.|.
T Consensus        84 d~li~~Ag~   92 (247)
T 3lyl_A           84 DILVNNAGI   92 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.03  E-value=0.013  Score=48.44  Aligned_cols=101  Identities=18%  Similarity=0.128  Sum_probs=65.2

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEec-CCcHHHHH----hcCCCEEEeCCCCCcccccC
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCG-ARNIELVK----SLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~~~~~~  214 (327)
                      ...++     +++++||-.| +| .|..+..+++..  +.++++++. ++..+.++    ..|...-+.....+..  ..
T Consensus        87 ~~~~~-----~~~~~vldiG-~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~  157 (255)
T 3mb5_A           87 AYAGI-----SPGDFIVEAG-VG-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY--EG  157 (255)
T ss_dssp             HHTTC-----CTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG--GC
T ss_pred             HhhCC-----CCCCEEEEec-CC-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh--hc
Confidence            45566     7899999998 44 388888888884  569999984 44444443    3454321111111111  11


Q ss_pred             CCCCcccEEEeCCCCC--cccccccccCCCcEEEeecCC
Q 020314          215 PSGRKYDAVINCVTGI--PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .....+|+|+...+.+  .+..+.+.|+++|+++.....
T Consensus       158 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  196 (255)
T 3mb5_A          158 IEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTPC  196 (255)
T ss_dssp             CCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred             cCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEECC
Confidence            2335699999877654  377888999999999877654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.03  E-value=0.0073  Score=50.15  Aligned_cols=77  Identities=17%  Similarity=0.219  Sum_probs=48.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--cccccCC--CCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--GAALKSP--SGRKY  220 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~~  220 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+. ++.+    .++..+.... +  |-.+.+  ....+..  .-+++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            67899999999999999998888889999998865 3322    2233444322 2  222211  1111100  01368


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |+++++.|.
T Consensus        91 d~lv~nAg~   99 (256)
T 3gaf_A           91 TVLVNNAGG   99 (256)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.03  E-value=0.071  Score=45.48  Aligned_cols=97  Identities=19%  Similarity=0.085  Sum_probs=60.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-Cc-HHHHHhcCCC--EEEe---CCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RN-IELVKSLGAD--EVLD---YKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~-~~~~~~lg~~--~v~~---~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      -.|.+++|.|++..+|..+++++...|++|++..++ .+ .+.+..++..  ....   ++..+  +.+..  +.+|+||
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~--L~e~l--~~ADIVI  250 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDL--LKKCS--LDSDVVI  250 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHH--HHHHH--HHCSEEE
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhH--HHHHh--ccCCEEE
Confidence            378999999965567999999999999998877543 11 1222233321  0000   00011  11111  3489999


Q ss_pred             eCCCCCcccccccccCCCcEEEeecCCc
Q 020314          225 NCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       225 d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .++|.+.+---.+.++++..++++|.+.
T Consensus       251 sAtg~p~~vI~~e~vk~GavVIDVgi~r  278 (320)
T 1edz_A          251 TGVPSENYKFPTEYIKEGAVCINFACTK  278 (320)
T ss_dssp             ECCCCTTCCBCTTTSCTTEEEEECSSSC
T ss_pred             ECCCCCcceeCHHHcCCCeEEEEcCCCc
Confidence            9999775433445578888889998764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.02  E-value=0.0089  Score=49.87  Aligned_cols=35  Identities=17%  Similarity=0.105  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+++++.
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   41 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH   41 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecC
Confidence            56789999999999999999888899999998864

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.02  E-value=0.011  Score=49.54  Aligned_cols=77  Identities=18%  Similarity=0.198  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-C-cHH----HHHhcCCCE-EEeCCCCCc----ccccC--CCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-R-NIE----LVKSLGADE-VLDYKTPDG----AALKS--PSGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~-~~~----~~~~lg~~~-v~~~~~~~~----~~~~~--~~~~~  219 (327)
                      +++++||+||++++|.+.++.+...|++|+.+++. + ..+    .++..+... ++..+-.+.    +..+.  ...++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            67899999999999999998888899999998863 2 222    233444432 222221111    11110  01136


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus       108 id~li~nAg~  117 (271)
T 4iin_A          108 LSYLVNNAGV  117 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999984

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.02  E-value=0.01  Score=47.28  Aligned_cols=142  Identities=14%  Similarity=0.174  Sum_probs=77.1

Q ss_pred             CCCCCEEEEEccCcccceeEe-ecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChH
Q 020314           88 FKVGDKVVAVLSGGGLAEFAV-AKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAV  166 (327)
Q Consensus        88 ~~~Gd~V~~~~~~g~~a~~~~-~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~  166 (327)
                      +++|+.+...+   .|.+|.. .+....+.+++.+.+..+.. + ........+...  +     +++.+||-.| +|. 
T Consensus         6 ~~~~~~~~~~p---~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~-~~~~~~~~l~~~--~-----~~~~~vLDiG-~G~-   71 (205)
T 3grz_A            6 INLSRHLAIVP---EWEDYQPVFKDQEIIRLDPGLAFGTGNH-Q-TTQLAMLGIERA--M-----VKPLTVADVG-TGS-   71 (205)
T ss_dssp             EEEETTEEEEE---TTCCCCCSSTTCEEEEESCC-----CCH-H-HHHHHHHHHHHH--C-----SSCCEEEEET-CTT-
T ss_pred             EEECCcEEEec---cccccccCCCCceeEEecCCcccCCCCC-c-cHHHHHHHHHHh--c-----cCCCEEEEEC-CCC-
Confidence            34455444432   5666666 66677777877766554321 1 101111122111  3     6788999998 444 


Q ss_pred             HHHHHHHHHhCCCeEEEEec-CCcHHHHH----hcCCC--EEEeCCCCCcccccCCCCCcccEEEeCCCCC----ccccc
Q 020314          167 GLYAVQLAKLGNTHVTATCG-ARNIELVK----SLGAD--EVLDYKTPDGAALKSPSGRKYDAVINCVTGI----PWSTF  235 (327)
Q Consensus       167 G~~~~~la~~~g~~v~~~~~-~~~~~~~~----~lg~~--~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~----~~~~~  235 (327)
                      |..+..+++....++++++. ++..+.++    ..+..  .++..+-.+      ...+.+|+|+.+..-.    .+..+
T Consensus        72 G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~------~~~~~fD~i~~~~~~~~~~~~l~~~  145 (205)
T 3grz_A           72 GILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA------DVDGKFDLIVANILAEILLDLIPQL  145 (205)
T ss_dssp             SHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT------TCCSCEEEEEEESCHHHHHHHGGGS
T ss_pred             CHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc------cCCCCceEEEECCcHHHHHHHHHHH
Confidence            77777777743349999984 44444333    33433  222221111      1135799999765432    26778


Q ss_pred             ccccCCCcEEEeec
Q 020314          236 EPNLGTTGKVIDFN  249 (327)
Q Consensus       236 ~~~l~~~G~~v~~g  249 (327)
                      .+.|+++|+++...
T Consensus       146 ~~~L~~gG~l~~~~  159 (205)
T 3grz_A          146 DSHLNEDGQVIFSG  159 (205)
T ss_dssp             GGGEEEEEEEEEEE
T ss_pred             HHhcCCCCEEEEEe
Confidence            88999999998754

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.02  E-value=0.006  Score=51.32  Aligned_cols=35  Identities=17%  Similarity=0.105  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~   62 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARD   62 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            57789999999999999999888899999988865

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.02  E-value=0.0069  Score=50.18  Aligned_cols=77  Identities=19%  Similarity=0.172  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-E--eCCCCC--cccccCC--CCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-L--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++ ++.+ ..+.++.... +  |-.+.+  ....+..  .-+.+|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57889999999999999998888889999988865 3333 3344443322 2  212211  0111100  01358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        85 v~~Ag~   90 (253)
T 1hxh_A           85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.02  E-value=0.0063  Score=50.16  Aligned_cols=35  Identities=20%  Similarity=0.111  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|++++++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~   39 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRH   39 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999998888889999998865

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.01  E-value=0.014  Score=48.17  Aligned_cols=102  Identities=13%  Similarity=0.116  Sum_probs=64.9

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEec-CCcHHHHHh----c-CCCEEEeCCCCCccccc
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCG-ARNIELVKS----L-GADEVLDYKTPDGAALK  213 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~-~~~~~~~~~----l-g~~~v~~~~~~~~~~~~  213 (327)
                      ...++     +++++||-.| +| .|..+..+++..  +.++++++. ++..+.+++    . |.+.+- ....+.... 
T Consensus        90 ~~~~~-----~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~-~~~~d~~~~-  160 (258)
T 2pwy_A           90 TLLDL-----APGMRVLEAG-TG-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVR-FHLGKLEEA-  160 (258)
T ss_dssp             HHTTC-----CTTCEEEEEC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEE-EEESCGGGC-
T ss_pred             HHcCC-----CCCCEEEEEC-CC-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEE-EEECchhhc-
Confidence            44556     7899999998 45 488888999885  569999984 444444432    2 533221 111111111 


Q ss_pred             CCCCCcccEEEeCCCCC--cccccccccCCCcEEEeecCCc
Q 020314          214 SPSGRKYDAVINCVTGI--PWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      ......+|+|+......  .+..+.+.|+++|+++......
T Consensus       161 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~  201 (258)
T 2pwy_A          161 ELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLPNI  201 (258)
T ss_dssp             CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred             CCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence            02235699999766543  3778888999999998776543

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.00  E-value=0.014  Score=48.79  Aligned_cols=35  Identities=14%  Similarity=0.147  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~   43 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRR   43 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999998888899999998865

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=95.99  E-value=0.013  Score=49.13  Aligned_cols=35  Identities=14%  Similarity=0.002  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|.+.++.+...|++|+++++.
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~   64 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDIN   64 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence            67899999999999999999888889999998865

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.97  E-value=0.019  Score=47.33  Aligned_cols=74  Identities=20%  Similarity=0.191  Sum_probs=47.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccCC--CCCcccEEEeC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKSP--SGRKYDAVINC  226 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~~--~~~~~d~v~d~  226 (327)
                      ++||+||+|++|.+.++.+...|++|+.+.++ ++.+ ..+.++... .+  |-.+.+  ....+..  .-+++|+++++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   81 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN   81 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            58999999999999998888899999998865 3433 334444321 22  222221  1111111  12369999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        82 Ag~   84 (248)
T 3asu_A           82 AGL   84 (248)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            983

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.97  E-value=0.034  Score=46.92  Aligned_cols=74  Identities=12%  Similarity=0.125  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhc----CCC-EEEeCCCCCcccccCCCCCcccEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSL----GAD-EVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~l----g~~-~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      +++++||+||+|++|.+++..+...|++|+.+.++ ++.+ .++.+    +.. ...|..+.+ ...+..  ..+|++++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~-~~~~~~--~~~DvlVn  194 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDA-SRAEAV--KGAHFVFT  194 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHH-HHHHHT--TTCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHH-HHHHHH--HhCCEEEE
Confidence            67899999999999999999999899998777765 3332 22222    222 122332211 111111  23799999


Q ss_pred             CCCC
Q 020314          226 CVTG  229 (327)
Q Consensus       226 ~~g~  229 (327)
                      ++|.
T Consensus       195 ~ag~  198 (287)
T 1lu9_A          195 AGAI  198 (287)
T ss_dssp             CCCT
T ss_pred             CCCc
Confidence            9973

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.97  E-value=0.0093  Score=47.35  Aligned_cols=32  Identities=22%  Similarity=0.273  Sum_probs=28.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      ++||+||+|++|...++.+. .|++|+++.+..
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~   36 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHS   36 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSS
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCc
Confidence            69999999999999998888 899999988653

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.96  E-value=0.0094  Score=49.47  Aligned_cols=34  Identities=9%  Similarity=0.048  Sum_probs=30.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++||+||+|++|.+.++.+...|++|+.++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   35 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLP   35 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECG
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5679999999999999998888889999988865

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=95.96  E-value=0.031  Score=44.38  Aligned_cols=94  Identities=13%  Similarity=0.130  Sum_probs=60.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHH----hcCCCE--EEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVK----SLGADE--VLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      +++++||-.| +| .|..+..+++.. ..++++++. ++..+.++    ..+.+.  ++..+..  ....  ....+|+|
T Consensus        39 ~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~--~~~~--~~~~~D~i  112 (204)
T 3e05_A           39 QDDLVMWDIG-AG-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAP--EGLD--DLPDPDRV  112 (204)
T ss_dssp             CTTCEEEEET-CT-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTT--TTCT--TSCCCSEE
T ss_pred             CCCCEEEEEC-CC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChh--hhhh--cCCCCCEE
Confidence            7899999999 45 488889999886 369999984 44444333    344432  2221111  1111  11459999


Q ss_pred             EeCCCCC----cccccccccCCCcEEEeecCC
Q 020314          224 INCVTGI----PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       224 ~d~~g~~----~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      +......    .+..+.+.|+++|+++.....
T Consensus       113 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  144 (204)
T 3e05_A          113 FIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT  144 (204)
T ss_dssp             EESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred             EECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence            9776522    267778899999999977554

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=95.96  E-value=0.019  Score=48.29  Aligned_cols=76  Identities=14%  Similarity=0.156  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-E--eCCCCC--cccccC-CCCCcccEEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-L--DYKTPD--GAALKS-PSGRKYDAVI  224 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~--~~~~~~--~~~~~~-~~~~~~d~v~  224 (327)
                      +++++||+||++++|.+.++.+...|++|+.++++ ++.+ ..+.++.... +  |-.+.+  .+..+. ..-.++|+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            67889999999999999998888899999998865 3433 3445554322 2  222221  111111 1124689999


Q ss_pred             eCCC
Q 020314          225 NCVT  228 (327)
Q Consensus       225 d~~g  228 (327)
                      ++.+
T Consensus       109 ~~aa  112 (281)
T 3ppi_A          109 VAHG  112 (281)
T ss_dssp             ECCC
T ss_pred             EccC
Confidence            8843

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=95.95  E-value=0.0076  Score=50.81  Aligned_cols=35  Identities=26%  Similarity=0.249  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||++++|.+.++.+...|++|+.++++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~   41 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARN   41 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            67899999999999999999888899999988865

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.95  E-value=0.0085  Score=50.43  Aligned_cols=35  Identities=17%  Similarity=0.003  Sum_probs=31.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      -+++++||+||++++|.+.++.+...|++|+++++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r   47 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDI   47 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence            36889999999999999999988889999998875

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.95  E-value=0.01  Score=49.45  Aligned_cols=36  Identities=28%  Similarity=0.338  Sum_probs=31.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC---CeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN---THVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g---~~v~~~~~~  187 (327)
                      .+++++||+||+|++|.+.++.+...|   ++|+.++++
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~   57 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN   57 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecC
Confidence            467889999999999999998888888   899999864

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.95  E-value=0.013  Score=49.40  Aligned_cols=35  Identities=14%  Similarity=0.038  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.+++.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~   43 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC   43 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence            67899999999999999999888899999988743

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.95  E-value=0.0065  Score=50.97  Aligned_cols=77  Identities=14%  Similarity=0.179  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEEE---eCCCCC--cccccC--CCCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEVL---DYKTPD--GAALKS--PSGRKY  220 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v~---~~~~~~--~~~~~~--~~~~~~  220 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+. ++.+    .++..+....+   |-.+.+  .+..+.  ...+++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            68899999999999999999888899999988754 3322    22344543222   111111  111110  112369


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |+++++.|.
T Consensus       105 D~lv~nAg~  113 (271)
T 4ibo_A          105 DILVNNAGI  113 (271)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999984

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.94  E-value=0.013  Score=49.42  Aligned_cols=34  Identities=15%  Similarity=0.034  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .++++||+||++++|.+.++.+...|++|+.+++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~   43 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDI   43 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEec
Confidence            6889999999999999999988889999998874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=95.94  E-value=0.021  Score=47.38  Aligned_cols=34  Identities=15%  Similarity=0.187  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~   40 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYN   40 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            6789999999999999999888888999998853

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.93  E-value=0.018  Score=48.42  Aligned_cols=78  Identities=15%  Similarity=0.170  Sum_probs=48.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-C-CcHH----HHHhcCCCEE-E--eCCCCC--cccccCC--CCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-A-RNIE----LVKSLGADEV-L--DYKTPD--GAALKSP--SGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~-~~~~----~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~  218 (327)
                      ..++++||+||++++|.+.++.+...|++|+.+++ + ++.+    .++..+.... +  |-.+.+  .+..+..  .-+
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            36788999999999999999988889999998874 3 2222    2233444322 2  222222  1111100  013


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      ++|+++++.|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            58999999985

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.93  E-value=0.043  Score=45.75  Aligned_cols=86  Identities=16%  Similarity=0.172  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      +++++|.| +|++|.+++..+...|.+|++..++ +|.+ ++ +++.. ....++        .  ..+|+||+|++...
T Consensus       118 ~k~vlvlG-aGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~--------l--~~~DiVInaTp~Gm  184 (269)
T 3phh_A          118 YQNALILG-AGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPP--------K--SAFDLIINATSASL  184 (269)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCC--------S--SCCSEEEECCTTCC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHH--------h--ccCCEEEEcccCCC
Confidence            78999999 6999999999999889888877765 5544 44 67632 222221        1  15899999987432


Q ss_pred             -----ccc--cccccCCCcEEEeecCCc
Q 020314          232 -----WST--FEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       232 -----~~~--~~~~l~~~G~~v~~g~~~  252 (327)
                           +..  ....++++..++++...+
T Consensus       185 ~~~~~l~~~~l~~~l~~~~~v~D~vY~P  212 (269)
T 3phh_A          185 HNELPLNKEVLKGYFKEGKLAYDLAYGF  212 (269)
T ss_dssp             CCSCSSCHHHHHHHHHHCSEEEESCCSS
T ss_pred             CCCCCCChHHHHhhCCCCCEEEEeCCCC
Confidence                 111  011456666777766543

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=95.92  E-value=0.014  Score=49.95  Aligned_cols=92  Identities=8%  Similarity=-0.025  Sum_probs=58.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      +++.+||-.| +|. |..+..+++..|++|++++. ++..+.++    ..|...-+.....+...   .. +.+|+|+..
T Consensus        89 ~~~~~vLDiG-cG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~-~~fD~v~~~  162 (318)
T 2fk8_A           89 KPGMTLLDIG-CGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED---FA-EPVDRIVSI  162 (318)
T ss_dssp             CTTCEEEEES-CTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG---CC-CCCSEEEEE
T ss_pred             CCcCEEEEEc-ccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH---CC-CCcCEEEEe
Confidence            7889999999 444 88888999877899999984 44444443    33432111111111111   11 569999875


Q ss_pred             -----CCCC----cccccccccCCCcEEEeec
Q 020314          227 -----VTGI----PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       227 -----~g~~----~~~~~~~~l~~~G~~v~~g  249 (327)
                           .+.+    .+..+.+.|+|+|+++...
T Consensus       163 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  194 (318)
T 2fk8_A          163 EAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  194 (318)
T ss_dssp             SCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             ChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence                 3321    2566678999999998654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=95.92  E-value=0.011  Score=48.97  Aligned_cols=35  Identities=14%  Similarity=0.165  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|++++++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~   46 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLD   46 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999888889999998865

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.92  E-value=0.0085  Score=49.37  Aligned_cols=34  Identities=21%  Similarity=0.150  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r   36 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYA   36 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            4678999999999999999988889999998886

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.92  E-value=0.01  Score=49.41  Aligned_cols=77  Identities=19%  Similarity=0.226  Sum_probs=48.0

Q ss_pred             CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCCc----HHHH-HhcCCCEEE--eCCCCC--cccccC--CCCCc
Q 020314          153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGARN----IELV-KSLGADEVL--DYKTPD--GAALKS--PSGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~~----~~~~-~~lg~~~v~--~~~~~~--~~~~~~--~~~~~  219 (327)
                      +++++||+||+  |++|.+.++.+...|++|+.+++..+    .+.+ ...+....+  |-.+.+  ....+.  ..-++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56789999998  99999999888888999999886532    1222 233433333  222221  111110  11136


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        88 iD~lv~~Ag~   97 (265)
T 1qsg_A           88 FDGFVHSIGF   97 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=95.92  E-value=0.0093  Score=50.15  Aligned_cols=36  Identities=14%  Similarity=0.199  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -+++++||+||++++|.+.++.+...|++|+.+.+.
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~   60 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRS   60 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            367899999999999999999888899999998865

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=95.92  E-value=0.0096  Score=49.35  Aligned_cols=34  Identities=18%  Similarity=0.040  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++||+||+|++|.+.++.+...|++|+.++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   35 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYN   35 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            4679999999999999999888899999998865

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=95.91  E-value=0.0079  Score=50.03  Aligned_cols=35  Identities=11%  Similarity=0.128  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   37 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG   37 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCC
Confidence            46789999999999999999888899999988864

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=95.90  E-value=0.015  Score=48.63  Aligned_cols=78  Identities=15%  Similarity=0.156  Sum_probs=47.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CC-cHH----HHHhcCCCEE-E--eCCCCC--cccccCC--CCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-AR-NIE----LVKSLGADEV-L--DYKTPD--GAALKSP--SGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~-~~~----~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~  218 (327)
                      ..++++||+||++++|.+.++.+...|++|+.+.+ .+ +.+    .++..+.... +  |-.+.+  .+..+..  .-+
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36788999999999999999888888999998753 32 222    2234444322 2  222221  1111100  113


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      ++|+++++.|.
T Consensus       105 ~iD~lvnnAG~  115 (267)
T 3u5t_A          105 GVDVLVNNAGI  115 (267)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.88  E-value=0.07  Score=44.83  Aligned_cols=89  Identities=15%  Similarity=0.153  Sum_probs=56.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcH-HHHHhcCC---CEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNI-ELVKSLGA---DEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~-~~~~~lg~---~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      .+++++|.| +|++|.+++..+...|+ +|++..++ ++. ++++.++.   ..+.+.++     .   . ..+|+|+++
T Consensus       125 ~~k~vlvlG-aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~-----l---~-~~aDiIIna  194 (281)
T 3o8q_A          125 KGATILLIG-AGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ-----L---K-QSYDVIINS  194 (281)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----C---C-SCEEEEEEC
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH-----h---c-CCCCEEEEc
Confidence            688999999 59999999988888997 88877765 443 34454442   12222211     1   1 469999999


Q ss_pred             CCCCccc----ccccccCCCcEEEeecCC
Q 020314          227 VTGIPWS----TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       227 ~g~~~~~----~~~~~l~~~G~~v~~g~~  251 (327)
                      ++.....    .-.+.++++..++++...
T Consensus       195 Tp~gm~~~~~~l~~~~l~~~~~V~DlvY~  223 (281)
T 3o8q_A          195 TSASLDGELPAIDPVIFSSRSVCYDMMYG  223 (281)
T ss_dssp             SCCCC----CSCCGGGEEEEEEEEESCCC
T ss_pred             CcCCCCCCCCCCCHHHhCcCCEEEEecCC
Confidence            9754311    123456666666776544

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.87  E-value=0.009  Score=49.32  Aligned_cols=35  Identities=17%  Similarity=0.092  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|...++.+...|++|+++++.
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~   44 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN   44 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCC
Confidence            57889999999999999999888889999998865

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.85  E-value=0.012  Score=50.10  Aligned_cols=35  Identities=14%  Similarity=0.110  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~   51 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK   51 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999998888899999998865

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.84  E-value=0.014  Score=48.88  Aligned_cols=35  Identities=17%  Similarity=0.143  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+.
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   61 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATT   61 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999998888899999998865

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=95.84  E-value=0.025  Score=48.07  Aligned_cols=98  Identities=8%  Similarity=0.012  Sum_probs=62.0

Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCC-EEEeCCCCCccccc
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGAD-EVLDYKTPDGAALK  213 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~-~v~~~~~~~~~~~~  213 (327)
                      +.+..++     +++.+||-.| +| .|..+..+++..|++|++++. ++..+.+    ...|.. .+ .....+...  
T Consensus        64 ~~~~~~~-----~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v-~~~~~d~~~--  133 (302)
T 3hem_A           64 ALDKLNL-----EPGMTLLDIG-CG-WGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRK-EVRIQGWEE--  133 (302)
T ss_dssp             HHHTTCC-----CTTCEEEEET-CT-TSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCE-EEEECCGGG--
T ss_pred             HHHHcCC-----CCcCEEEEee-cc-CcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCce-EEEECCHHH--
Confidence            3345555     7899999999 44 488899999988899999984 4444444    344433 11 111111111  


Q ss_pred             CCCCCcccEEEeCCCC----------------CcccccccccCCCcEEEeec
Q 020314          214 SPSGRKYDAVINCVTG----------------IPWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~----------------~~~~~~~~~l~~~G~~v~~g  249 (327)
                       . .+.+|+|+....-                ..+..+.+.|+|+|+++...
T Consensus       134 -~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  183 (302)
T 3hem_A          134 -F-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  183 (302)
T ss_dssp             -C-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred             -c-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence             1 4679999864321                11556778999999998754

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.83  E-value=0.011  Score=48.93  Aligned_cols=35  Identities=26%  Similarity=0.318  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|...++.+...|++|+++++.
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~   40 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRK   40 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCC
Confidence            56789999999999999998888899999998854

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.82  E-value=0.013  Score=49.18  Aligned_cols=34  Identities=12%  Similarity=0.053  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r   43 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYR   43 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            5678999999999999999888889999999887

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.80  E-value=0.023  Score=47.43  Aligned_cols=34  Identities=18%  Similarity=0.181  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .++++||+||++++|.+.++.+...|++|+.+++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~   60 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYA   60 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            6789999999999999999988889999998875

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.78  E-value=0.023  Score=48.53  Aligned_cols=89  Identities=18%  Similarity=0.080  Sum_probs=64.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      -.|.+|.|+| .|.+|...++.++.+|++|++..+..+.+.+..+|....    + ..+..     ...|+|+.++....
T Consensus       140 l~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~----~-l~ell-----~~aDvV~l~~p~~~  208 (307)
T 1wwk_A          140 LEGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGKFV----D-LETLL-----KESDVVTIHVPLVE  208 (307)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEEC----C-HHHHH-----HHCSEEEECCCCST
T ss_pred             cCCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCcccc----C-HHHHH-----hhCCEEEEecCCCh
Confidence            3688999999 899999999999999999998886544455667776421    1 11222     24799999887422


Q ss_pred             -----c-cccccccCCCcEEEeecCC
Q 020314          232 -----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                           + ...+..+++++.++.++..
T Consensus       209 ~t~~li~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          209 STYHLINEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             TTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             HHhhhcCHHHHhcCCCCeEEEECCCC
Confidence                 2 2456789999999998764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.78  E-value=0.012  Score=49.17  Aligned_cols=36  Identities=19%  Similarity=0.098  Sum_probs=31.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKL-GNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~-~g~~v~~~~~~  187 (327)
                      .+++++||+||+|++|..+++.+.. .|++|+.+++.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~   38 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARD   38 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCC
Confidence            3578899999999999998888777 89999999865

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=95.77  E-value=0.012  Score=49.01  Aligned_cols=35  Identities=14%  Similarity=0.150  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+++.++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~   47 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN   47 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999888899999998865

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.77  E-value=0.017  Score=49.72  Aligned_cols=77  Identities=17%  Similarity=0.204  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec---------C-CcHH----HHHhcCCCEEEeCCCCCc--ccccC--
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG---------A-RNIE----LVKSLGADEVLDYKTPDG--AALKS--  214 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~---------~-~~~~----~~~~lg~~~v~~~~~~~~--~~~~~--  214 (327)
                      .++++||+||+|++|.+.++.+...|++|++.++         + ++.+    .++..+...+.|..+...  ...+.  
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            6788999999999999999988889999998642         2 2221    223334444445444321  11110  


Q ss_pred             CCCCcccEEEeCCCC
Q 020314          215 PSGRKYDAVINCVTG  229 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~  229 (327)
                      ..-+++|++|++.|.
T Consensus        88 ~~~g~iD~lVnnAG~  102 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGI  102 (319)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            011369999999983

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.74  E-value=0.016  Score=49.92  Aligned_cols=35  Identities=29%  Similarity=0.256  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|++++++
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~   38 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRD   38 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCc
Confidence            46789999999999999999999999999998753

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.74  E-value=0.0077  Score=50.60  Aligned_cols=35  Identities=26%  Similarity=0.229  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|.+.++.+...|++|+.++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH   39 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57789999999999999998888889999998865

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.73  E-value=0.015  Score=48.95  Aligned_cols=35  Identities=20%  Similarity=0.266  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+++.++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~   77 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRT   77 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCC
Confidence            56789999999999999999888889999987754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=95.72  E-value=0.021  Score=47.35  Aligned_cols=77  Identities=17%  Similarity=0.214  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-ecC-CcHH----HHHhcCCCEE-E--eCCCCC--cccccCC--CCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTAT-CGA-RNIE----LVKSLGADEV-L--DYKTPD--GAALKSP--SGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~-~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~  219 (327)
                      +++++||+||++++|.+.++.+...|++|+.+ .++ ++.+    .++..+.... +  |-.+.+  ....+..  .-++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57889999999999999999998999999987 444 2222    2233444322 2  222211  1111110  1135


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        83 id~lv~nAg~   92 (258)
T 3oid_A           83 LDVFVNNAAS   92 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999973

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.71  E-value=0.019  Score=48.28  Aligned_cols=34  Identities=15%  Similarity=0.192  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r   57 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGF   57 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            5788999999999999999988899999998886

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=95.71  E-value=0.012  Score=48.64  Aligned_cols=74  Identities=5%  Similarity=-0.032  Sum_probs=46.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH---HhcCCCEEEeCCCCC-cccccCC--CCCcccEEEeCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV---KSLGADEVLDYKTPD-GAALKSP--SGRKYDAVINCV  227 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~---~~lg~~~v~~~~~~~-~~~~~~~--~~~~~d~v~d~~  227 (327)
                      +++||+||+|++|.+.++.+...|++|+.++++ ++.+.+   +..+.+.... +..+ ....+..  .-+++|+++++.
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~~~v~~~~~~~~~~~g~iD~lv~nA   80 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-SEQEPAELIEAVTSAYGQVDVLVSND   80 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-CCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-CHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            369999999999999999988899999988854 443322   2334332221 2222 1111100  013689999998


Q ss_pred             CC
Q 020314          228 TG  229 (327)
Q Consensus       228 g~  229 (327)
                      |.
T Consensus        81 g~   82 (254)
T 1zmt_A           81 IF   82 (254)
T ss_dssp             CC
T ss_pred             Cc
Confidence            84

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.71  E-value=0.012  Score=50.84  Aligned_cols=35  Identities=17%  Similarity=0.145  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+.+|||+||+|.+|..+++.+...|++|+++++.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~   38 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNL   38 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecC
Confidence            45689999999999999999988889999999853

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=95.69  E-value=0.015  Score=50.26  Aligned_cols=33  Identities=18%  Similarity=0.188  Sum_probs=28.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +++|||+||+|++|.++++.+...|++|+.+.+
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r   34 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYA   34 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEe
Confidence            567999999999999999999989998777663

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.69  E-value=0.024  Score=46.72  Aligned_cols=96  Identities=16%  Similarity=0.102  Sum_probs=60.1

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCC---EEEeCCCCCccccc
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGAD---EVLDYKTPDGAALK  213 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~---~v~~~~~~~~~~~~  213 (327)
                      ...++     +++.+||-.| +| .|..+..+++..|+++++++. ++..+.+    +..|..   .+...+-.  . ..
T Consensus        30 ~~~~~-----~~~~~VLDiG-cG-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~--~-~~   99 (256)
T 1nkv_A           30 RVLRM-----KPGTRILDLG-SG-SGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA--G-YV   99 (256)
T ss_dssp             HHTCC-----CTTCEEEEET-CT-TCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT--T-CC
T ss_pred             HhcCC-----CCCCEEEEEC-CC-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH--h-CC
Confidence            45556     7899999998 34 388888999988999999984 4433333    334432   11111111  1 11


Q ss_pred             CCCCCcccEEEeCCC-----CC--cccccccccCCCcEEEeec
Q 020314          214 SPSGRKYDAVINCVT-----GI--PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g-----~~--~~~~~~~~l~~~G~~v~~g  249 (327)
                        ..+.||+|+..-.     +.  .+..+.++|+|+|+++...
T Consensus       100 --~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          100 --ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             --CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             --cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence              1356999985221     11  1677788999999998753

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.68  E-value=0.025  Score=46.37  Aligned_cols=73  Identities=21%  Similarity=0.177  Sum_probs=45.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecCC-cHHHHHhcCCCEE-EeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGAR-NIELVKSLGADEV-LDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~~-~~~~~~~lg~~~v-~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .+.+|||+||+|.+|...++.+...  |.+|++++++. +.+.+ ..+...+ .|..+.+ .+.+..  .++|++|++.+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~-~~~~~~--~~~d~vi~~a~   78 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDAD-SINPAF--QGIDALVILTS   78 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHH-HHHHHH--TTCSEEEECCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHH-HHHHHH--cCCCEEEEecc
Confidence            5678999999999999999888877  78999988652 32221 1122221 1222211 111111  24899999987


Q ss_pred             C
Q 020314          229 G  229 (327)
Q Consensus       229 ~  229 (327)
                      .
T Consensus        79 ~   79 (253)
T 1xq6_A           79 A   79 (253)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=95.68  E-value=0.01  Score=47.12  Aligned_cols=72  Identities=24%  Similarity=0.145  Sum_probs=44.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .+|+|+||+|.+|..+++.+...|.+|++++++. +.+.....+. .++..+-.+. .+.+..  .++|++|++.+.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~--~~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQAADVDKTV--AGQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS-EEEESCTTSHHHHHHHH--TTCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCce-EEEEecCCCHHHHHHHH--cCCCEEEECccC
Confidence            5799999999999999998888899999998652 2221101111 2222221121 111111  248999999984

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.68  E-value=0.018  Score=47.31  Aligned_cols=34  Identities=21%  Similarity=0.172  Sum_probs=30.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~   36 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYA   36 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            4678999999999999999988889999988874

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.67  E-value=0.012  Score=50.48  Aligned_cols=34  Identities=21%  Similarity=0.062  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .++++||+||++++|.++++.+...|++|+++++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~   78 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDL   78 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEec
Confidence            6789999999999999999988889999998864

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.66  E-value=0.0099  Score=51.20  Aligned_cols=35  Identities=14%  Similarity=0.135  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      -.++++||+||++++|.+.++.+...|++|+.+++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r   59 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI   59 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            36789999999999999999888888999999874

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.65  E-value=0.012  Score=48.47  Aligned_cols=34  Identities=21%  Similarity=0.106  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++||+||+|++|.+.++.+...|++|++++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~   35 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLS   35 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            4679999999999999998888899999998865

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=95.64  E-value=0.016  Score=49.23  Aligned_cols=35  Identities=17%  Similarity=0.097  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++.
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~   59 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRK   59 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            67889999999999999998888899999998865

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=95.63  E-value=0.12  Score=44.73  Aligned_cols=134  Identities=10%  Similarity=0.029  Sum_probs=75.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHH-h-CCCeEEEEecC--CcH-HHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAK-L-GNTHVTATCGA--RNI-ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~-~-~g~~v~~~~~~--~~~-~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .-+|.|.| .|.+|...++.++ . .+++++++++.  ++. +.++.+|...+.+.  . .+.+   ....+|+|+.|++
T Consensus         8 ~~~v~iiG-~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~--~-~~~l---~~~~~D~V~i~tp   80 (346)
T 3cea_A            8 PLRAAIIG-LGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTN--Y-KDMI---DTENIDAIFIVAP   80 (346)
T ss_dssp             CEEEEEEC-CSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESC--H-HHHH---TTSCCSEEEECSC
T ss_pred             cceEEEEc-CCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCC--H-HHHh---cCCCCCEEEEeCC
Confidence            35799999 7999998887776 4 46788877643  344 34567787544421  1 1122   2246999999998


Q ss_pred             CCc-ccccccccCCCcEEEeecCC-c--hhHHHHhhhhcccc-ceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          229 GIP-WSTFEPNLGTTGKVIDFNPS-P--RVLLTFAWKKLTFS-KKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       229 ~~~-~~~~~~~l~~~G~~v~~g~~-~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      ... .+.+..+++.+ +-|.+.-+ .  .............+ +..+...+.......++.+.+++++|.|.
T Consensus        81 ~~~h~~~~~~al~~G-~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~iG  151 (346)
T 3cea_A           81 TPFHPEMTIYAMNAG-LNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDIG  151 (346)
T ss_dssp             GGGHHHHHHHHHHTT-CEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTTC
T ss_pred             hHhHHHHHHHHHHCC-CEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCCC
Confidence            765 66777777765 44444422 1  11111111111122 33332112122234578888899988763

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=95.63  E-value=0.014  Score=49.98  Aligned_cols=89  Identities=16%  Similarity=0.006  Sum_probs=64.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      -.|.+|.|+| .|.+|...++.++.+|++|++..+..+...+..+|... .   + ..+..     ...|+|+.++....
T Consensus       140 l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~-~---~-l~ell-----~~aDvVvl~~P~~~  208 (313)
T 2ekl_A          140 LAGKTIGIVG-FGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAKA-V---S-LEELL-----KNSDVISLHVTVSK  208 (313)
T ss_dssp             CTTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEE-C---C-HHHHH-----HHCSEEEECCCCCT
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCcee-c---C-HHHHH-----hhCCEEEEeccCCh
Confidence            4788999999 89999999999999999999888654434456677542 1   1 11122     24799999887432


Q ss_pred             -----c-cccccccCCCcEEEeecCC
Q 020314          232 -----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                           + ...+..+++++.++.++..
T Consensus       209 ~t~~li~~~~l~~mk~ga~lIn~arg  234 (313)
T 2ekl_A          209 DAKPIIDYPQFELMKDNVIIVNTSRA  234 (313)
T ss_dssp             TSCCSBCHHHHHHSCTTEEEEESSCG
T ss_pred             HHHHhhCHHHHhcCCCCCEEEECCCC
Confidence                 2 2455788999999988764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=95.63  E-value=0.011  Score=51.01  Aligned_cols=36  Identities=19%  Similarity=0.232  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~   53 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNF   53 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            466789999999999999999888889999999863

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.56  E-value=0.02  Score=48.11  Aligned_cols=78  Identities=14%  Similarity=0.111  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCC---cHHHH-HhcCCCEEEeCCCCCc----ccccCC--CCCc
Q 020314          152 GQQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGAR---NIELV-KSLGADEVLDYKTPDG----AALKSP--SGRK  219 (327)
Q Consensus       152 ~~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~~---~~~~~-~~lg~~~v~~~~~~~~----~~~~~~--~~~~  219 (327)
                      -+++++||+||+  +++|.+.++.+...|++|+.+++..   ..+.+ +..+....+..+-.+.    +..+..  .-+.
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            367899999988  6699999988888999999988654   22322 3444333332222221    111110  1135


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus       104 id~li~nAg~  113 (280)
T 3nrc_A          104 LDAIVHSIAF  113 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            8999999984

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=95.52  E-value=0.043  Score=46.64  Aligned_cols=32  Identities=19%  Similarity=0.135  Sum_probs=29.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +|||+||+|.+|...++.+...|.+|+++++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   33 (312)
T 3ko8_A            2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNL   33 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence            59999999999999999998899999999854

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.52  E-value=0.017  Score=47.39  Aligned_cols=33  Identities=12%  Similarity=0.078  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      +++++||+||+|++|...++.+...|++|++++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~   36 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNG   36 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence            567899999999999999998888999999884

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.52  E-value=0.029  Score=46.35  Aligned_cols=34  Identities=24%  Similarity=0.290  Sum_probs=29.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      .++++|||+||++++|.+.++.+...|++|+.++
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~   44 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGC   44 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence            5788999999999999999988888899999887

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=95.52  E-value=0.011  Score=51.13  Aligned_cols=35  Identities=20%  Similarity=0.235  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~   54 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNF   54 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECC
Confidence            56789999999999999998888889999999864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.51  E-value=0.013  Score=49.86  Aligned_cols=35  Identities=26%  Similarity=0.294  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~   59 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN   59 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57789999999999999999888889999998865

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.51  E-value=0.011  Score=51.00  Aligned_cols=36  Identities=19%  Similarity=0.263  Sum_probs=30.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~   47 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVAR   47 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence            578899999999999999998888889999999864

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=95.49  E-value=0.018  Score=47.73  Aligned_cols=35  Identities=17%  Similarity=0.040  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|...++.+...|++|++++++
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~   40 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLD   40 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            57789999999999999998888889999998865

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=95.49  E-value=0.011  Score=49.33  Aligned_cols=76  Identities=20%  Similarity=0.344  Sum_probs=48.5

Q ss_pred             CCCeEEEEcC--CChHHHHHHHHHHhCCCeEEEEecCC-c-HH-HHHhcCCC-EEE--eCCCCC--cccc----cCCC-C
Q 020314          153 QQKNILITAA--SGAVGLYAVQLAKLGNTHVTATCGAR-N-IE-LVKSLGAD-EVL--DYKTPD--GAAL----KSPS-G  217 (327)
Q Consensus       153 ~~~~vlV~g~--~g~~G~~~~~la~~~g~~v~~~~~~~-~-~~-~~~~lg~~-~v~--~~~~~~--~~~~----~~~~-~  217 (327)
                      +++++||+||  ++++|.+.++.+...|++|+.++++. + .+ ..+.++.. ..+  |-.+.+  ....    +..+ +
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5788999998  89999999998888999999888653 3 23 33444432 122  222221  1111    1111 1


Q ss_pred             CcccEEEeCCC
Q 020314          218 RKYDAVINCVT  228 (327)
Q Consensus       218 ~~~d~v~d~~g  228 (327)
                      .++|+++++.|
T Consensus        86 ~~iD~lv~nAg   96 (269)
T 2h7i_A           86 NKLDGVVHSIG   96 (269)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCceEEEECCc
Confidence            26999999988

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.48  E-value=0.012  Score=48.91  Aligned_cols=34  Identities=18%  Similarity=0.156  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r   39 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR   39 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcC
Confidence            5678999999999999999888888999999887

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=95.47  E-value=0.0074  Score=50.41  Aligned_cols=70  Identities=13%  Similarity=0.062  Sum_probs=44.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcc-cccCCCCCcccEEEeCCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~-~~~~~~~~~~d~v~d~~g~  229 (327)
                      +++|||+||+|++|..+++.+...|++|+++++.. +.+   ..+. ..+..+-.+.. +.+..  .++|++|++.|.
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~-~~~~~Dl~d~~~~~~~~--~~~D~vi~~Ag~   74 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNE-ECVQCDLADANAVNAMV--AGCDGIVHLGGI   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTE-EEEECCTTCHHHHHHHH--TTCSEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCC-EEEEcCCCCHHHHHHHH--cCCCEEEECCCC
Confidence            46799999999999999988888899999988653 322   1111 12211111211 11111  258999999874

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.46  E-value=0.015  Score=54.76  Aligned_cols=78  Identities=15%  Similarity=0.177  Sum_probs=46.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec---------C-CcH----HHHHhcCCCEEEeCCCCC--cccccCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG---------A-RNI----ELVKSLGADEVLDYKTPD--GAALKSP  215 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~---------~-~~~----~~~~~lg~~~v~~~~~~~--~~~~~~~  215 (327)
                      -.|+++||+||++++|.+.++.+...|++|+++++         + ++.    +.++..+...+.|..+..  .+..+..
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence            37889999999999999999888889999998764         2 222    223345555555554432  1112111


Q ss_pred             --CCCcccEEEeCCCC
Q 020314          216 --SGRKYDAVINCVTG  229 (327)
Q Consensus       216 --~~~~~d~v~d~~g~  229 (327)
                        .-+.+|++|++.|.
T Consensus        97 ~~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           97 IKAFGRVDILVNNAGI  112 (613)
T ss_dssp             --------CEECCCCC
T ss_pred             HHHCCCCcEEEECCCC
Confidence              11369999999984

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.45  E-value=0.025  Score=47.19  Aligned_cols=35  Identities=11%  Similarity=0.158  Sum_probs=30.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .+++++||+||++++|.+.++.+...|++|+.+.+
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~   57 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHS   57 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            35678999999999999999988889999998873

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=95.45  E-value=0.013  Score=49.32  Aligned_cols=91  Identities=16%  Similarity=0.134  Sum_probs=53.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCCcccccCCCCCcccEEEeCCCCCc-
Q 020314          156 NILITAASGAVGLYAVQLAKLG-NTHVTATCGA-RNIELVKSLGADEV-LDYKTPDGAALKSPSGRKYDAVINCVTGIP-  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-  231 (327)
                      +|||+||+|.+|..+++.+... |.+|++++++ ++...+...+...+ .|..+.+ .+.+..  .++|.||++.+... 
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~-~l~~~~--~~~d~vi~~a~~~~~   78 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQE-SMVEAF--KGMDTVVFIPSIIHP   78 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHH-HHHHHT--TTCSEEEECCCCCCS
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHH-HHHHHH--hCCCEEEEeCCCCcc
Confidence            4999999999999998888776 8899999865 33322222333222 1222211 111111  36899999988421 


Q ss_pred             -------ccccccccCCC--cEEEeec
Q 020314          232 -------WSTFEPNLGTT--GKVIDFN  249 (327)
Q Consensus       232 -------~~~~~~~l~~~--G~~v~~g  249 (327)
                             ....++.++..  +++|.++
T Consensus        79 ~~~~~~~~~~l~~aa~~~gv~~iv~~S  105 (289)
T 3e48_A           79 SFKRIPEVENLVYAAKQSGVAHIIFIG  105 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             chhhHHHHHHHHHHHHHcCCCEEEEEc
Confidence                   22333444333  4787664

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.45  E-value=0.018  Score=48.71  Aligned_cols=35  Identities=20%  Similarity=0.205  Sum_probs=28.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC---eEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT---HVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~---~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|+   +|+.+.++
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~   69 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR   69 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC
Confidence            567899999999999998877666665   88888865

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.44  E-value=0.014  Score=48.55  Aligned_cols=35  Identities=29%  Similarity=0.324  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCC-hHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASG-AVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g-~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+| ++|.+.++.+...|++|+.+++.
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~   56 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYH   56 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence            678999999875 89999998888889999998865

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=95.44  E-value=0.021  Score=47.28  Aligned_cols=92  Identities=10%  Similarity=0.049  Sum_probs=60.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCC----EEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGAD----EVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~----~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      +++.+||-.| +| .|..+..+++..++++++++. ++..+.+++....    .++..+-.+   . ....+.+|+|+.+
T Consensus        54 ~~~~~vLdiG-~G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~---~-~~~~~~fD~v~~~  127 (266)
T 3ujc_A           54 NENSKVLDIG-SG-LGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILT---K-EFPENNFDLIYSR  127 (266)
T ss_dssp             CTTCEEEEET-CT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT---C-CCCTTCEEEEEEE
T ss_pred             CCCCEEEEEC-CC-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc---C-CCCCCcEEEEeHH
Confidence            7889999999 34 788888898877889999984 4566666654432    111111111   1 1224579999975


Q ss_pred             CCCC---------cccccccccCCCcEEEeec
Q 020314          227 VTGI---------PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       227 ~g~~---------~~~~~~~~l~~~G~~v~~g  249 (327)
                      ..-.         .+..+.+.|+|+|+++...
T Consensus       128 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~  159 (266)
T 3ujc_A          128 DAILALSLENKNKLFQKCYKWLKPTGTLLITD  159 (266)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence            4321         1567778999999998764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=95.43  E-value=0.019  Score=49.78  Aligned_cols=70  Identities=20%  Similarity=0.135  Sum_probs=43.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .++.+|||+||+|.+|..+++.+...|.+|+++++....     .+...+. |..+.+ ......  .++|+||++.+.
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~-~~~~~~--~~~d~vih~A~~   87 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGGEEVVGSLEDGQ-ALSDAI--MGVSAVLHLGAF   87 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCCSEEESCTTCHH-HHHHHH--TTCSEEEECCCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCccEEecCcCCHH-HHHHHH--hCCCEEEECCcc
Confidence            567789999999999999999999899999999865322     2222221 222211 111111  268999998874

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=95.41  E-value=0.019  Score=46.90  Aligned_cols=36  Identities=19%  Similarity=0.181  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN  189 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~  189 (327)
                      ++++||+||+|++|...++.+...|++|+++++...
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~   37 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   37 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc
Confidence            467999999999999999888888999999886543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=95.41  E-value=0.059  Score=47.47  Aligned_cols=35  Identities=23%  Similarity=0.172  Sum_probs=30.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKL-GNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~-~g~~v~~~~~  186 (327)
                      ..++++||+||++++|++.+..+.. .|++|+.+.+
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~   80 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFF   80 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEEC
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeC
Confidence            5688899999999999988877777 8999998864

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.40  E-value=0.029  Score=48.69  Aligned_cols=76  Identities=14%  Similarity=0.050  Sum_probs=47.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CC-eEEEEecC-CcHHH-HHhcCCC--EEEeCCCCCc-ccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NT-HVTATCGA-RNIEL-VKSLGAD--EVLDYKTPDG-AALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~-~v~~~~~~-~~~~~-~~~lg~~--~v~~~~~~~~-~~~~~~~~~~~d~v~  224 (327)
                      -++.+|||+||+|.+|...++.+... |. +|+++++. .+.+. .+.+...  ..+..+-.+. .+.+..  .++|+||
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~--~~~D~Vi   96 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYAL--EGVDICI   96 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHT--TTCSEEE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHH--hcCCEEE
Confidence            46789999999999999998877777 97 99998865 33332 2333221  1221111111 111111  2689999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.+.
T Consensus        97 h~Aa~  101 (344)
T 2gn4_A           97 HAAAL  101 (344)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99984

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.40  E-value=0.026  Score=48.71  Aligned_cols=71  Identities=15%  Similarity=0.117  Sum_probs=43.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|||+||+|.+|...++.+...|.+|+++++. .+.+.+...+... +..+-.+. .+.+..  .++|+||++.+.
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~-~~~Dl~d~~~~~~~~--~~~d~vih~a~~   87 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPEC-RVAEMLDHAGLERAL--RGLDGVIFSAGY   87 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEE-EECCTTCHHHHHHHT--TTCSEEEEC---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEE-EEecCCCHHHHHHHH--cCCCEEEECCcc
Confidence            79999999999999999888889999999864 3333222223322 22221121 111111  258999999873

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.40  E-value=0.014  Score=50.82  Aligned_cols=88  Identities=10%  Similarity=0.038  Sum_probs=62.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-c
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-P  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~  231 (327)
                      .|.+|.|+| .|.+|...++.++.+|++|++..+..+.+.+...|...+   .+ ..+.+     ...|+|+-++... .
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~---~~-l~ell-----~~aDiV~l~~Plt~~  228 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVA---ES-KDALF-----EQSDVLSVHLRLNDE  228 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEEC---SS-HHHHH-----HHCSEEEECCCCSTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEe---CC-HHHHH-----hhCCEEEEeccCcHH
Confidence            688999999 899999999999999999999886544455566665421   01 11122     2368998887632 1


Q ss_pred             ----c-cccccccCCCcEEEeecC
Q 020314          232 ----W-STFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       232 ----~-~~~~~~l~~~G~~v~~g~  250 (327)
                          + ...+..|+++..+|.++.
T Consensus       229 t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          229 TRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             TTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             HHHhhCHHHHhhCCCCcEEEECCC
Confidence                1 255678899999998874

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.38  E-value=0.025  Score=48.04  Aligned_cols=74  Identities=24%  Similarity=0.278  Sum_probs=46.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--------cHHHH---HhcCCCEE-EeCCCCCcccccCCCCCccc
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--------NIELV---KSLGADEV-LDYKTPDGAALKSPSGRKYD  221 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--------~~~~~---~~lg~~~v-~~~~~~~~~~~~~~~~~~~d  221 (327)
                      +.+|+|+||+|.+|...++.+...|.+|++++++.        +.+.+   ...+...+ .|..+.+ .+.+..  .++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~-~l~~~~--~~~d   78 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHE-TLVKAI--KQVD   78 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHH-HHHHHH--TTCS
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHH-HHHHHH--hCCC
Confidence            35699999999999999988887899999988653        22222   23344322 1222221 111111  2589


Q ss_pred             EEEeCCCCC
Q 020314          222 AVINCVTGI  230 (327)
Q Consensus       222 ~v~d~~g~~  230 (327)
                      +||++.+..
T Consensus        79 ~vi~~a~~~   87 (307)
T 2gas_A           79 IVICAAGRL   87 (307)
T ss_dssp             EEEECSSSS
T ss_pred             EEEECCccc
Confidence            999999853

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.38  E-value=0.015  Score=48.39  Aligned_cols=35  Identities=23%  Similarity=0.173  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.+.
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~   40 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS   40 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence            46789999999999999998888889999988744

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.36  E-value=0.033  Score=50.35  Aligned_cols=90  Identities=18%  Similarity=0.038  Sum_probs=64.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      -.|.+|.|.| .|.+|..+++.++.+|++|++..+.. +...+...|.. +.   + -.+.+     ...|+|+-+.+..
T Consensus       255 l~GktVgIIG-~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~-~~---~-l~ell-----~~aDiVi~~~~t~  323 (479)
T 1v8b_A          255 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VV---T-LDEIV-----DKGDFFITCTGNV  323 (479)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-EC---C-HHHHT-----TTCSEEEECCSSS
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCE-ec---C-HHHHH-----hcCCEEEECCChh
Confidence            4789999999 89999999999999999999998653 32234455542 11   1 01111     3479999987654


Q ss_pred             c-c-cccccccCCCcEEEeecCCc
Q 020314          231 P-W-STFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       231 ~-~-~~~~~~l~~~G~~v~~g~~~  252 (327)
                      . + ...++.|+++..++.++...
T Consensus       324 ~lI~~~~l~~MK~gailiNvgrg~  347 (479)
T 1v8b_A          324 DVIKLEHLLKMKNNAVVGNIGHFD  347 (479)
T ss_dssp             SSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             hhcCHHHHhhcCCCcEEEEeCCCC
Confidence            4 3 36778899999999998653

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.34  E-value=0.015  Score=48.88  Aligned_cols=35  Identities=17%  Similarity=0.202  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++.
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~   67 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNS   67 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999888888789999998854

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.32  E-value=0.13  Score=43.84  Aligned_cols=95  Identities=14%  Similarity=0.022  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC----CcH-HHHHhc----CCC-EEEeCCCCCcccccCCCCCccc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA----RNI-ELVKSL----GAD-EVLDYKTPDGAALKSPSGRKYD  221 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~----~~~-~~~~~l----g~~-~v~~~~~~~~~~~~~~~~~~~d  221 (327)
                      .++++||+| +|++|.+++..+...|+ +|+++.++    ++. ++++++    +.. .+++.++.+ .+.+..  ..+|
T Consensus       153 ~gk~~lVlG-aGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~-~l~~~l--~~aD  228 (315)
T 3tnl_A          153 IGKKMTICG-AGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHE-QLRKEI--AESV  228 (315)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHH-HHHHHH--HTCS
T ss_pred             cCCEEEEEC-CChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHH-HHHhhh--cCCC
Confidence            688999999 59999999999999999 78877765    122 222222    221 233333211 000001  2489


Q ss_pred             EEEeCCCCCcc------cc-cccccCCCcEEEeecCC
Q 020314          222 AVINCVTGIPW------ST-FEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       222 ~v~d~~g~~~~------~~-~~~~l~~~G~~v~~g~~  251 (327)
                      +||+|++-...      .. ....++++..++++-..
T Consensus       229 iIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~  265 (315)
T 3tnl_A          229 IFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYK  265 (315)
T ss_dssp             EEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCS
T ss_pred             EEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccC
Confidence            99999973221      11 23456666666776544

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.29  E-value=0.02  Score=49.38  Aligned_cols=34  Identities=26%  Similarity=0.220  Sum_probs=30.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~   36 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRR   36 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            5689999999999999998888889999999864

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.28  E-value=0.044  Score=47.52  Aligned_cols=35  Identities=23%  Similarity=0.153  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   60 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNF   60 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45689999999999999998888889999999864

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=95.27  E-value=0.032  Score=46.28  Aligned_cols=75  Identities=13%  Similarity=0.169  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCC--EEE--eCCCCC--cc----cccCC
Q 020314          153 QQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGAD--EVL--DYKTPD--GA----ALKSP  215 (327)
Q Consensus       153 ~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~--~v~--~~~~~~--~~----~~~~~  215 (327)
                      +|+++||+||+|  |+|.+.++.+...|++|+.+.++ ++.+    .+++++..  ..+  |-.+.+  ..    ..+..
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            789999999876  89999999888999999998865 3332    23344432  222  222221  11    11112


Q ss_pred             CCCcccEEEeCCCC
Q 020314          216 SGRKYDAVINCVTG  229 (327)
Q Consensus       216 ~~~~~d~v~d~~g~  229 (327)
                        +++|+++++.|.
T Consensus        85 --G~iD~lvnnAg~   96 (256)
T 4fs3_A           85 --GNIDGVYHSIAF   96 (256)
T ss_dssp             --CCCSEEEECCCC
T ss_pred             --CCCCEEEecccc
Confidence              469999999873

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=95.26  E-value=0.03  Score=45.70  Aligned_cols=76  Identities=16%  Similarity=0.170  Sum_probs=47.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCE-EE--eCCCCC--cccccC--CCCCcccEEE
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADE-VL--DYKTPD--GAALKS--PSGRKYDAVI  224 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~-v~--~~~~~~--~~~~~~--~~~~~~d~v~  224 (327)
                      ++++||+||++++|.+.++.+...|++|+.++++ ++.+ ..+.++... .+  |-.+.+  ....+.  ...+++|+++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            5689999999999999998888899999998865 3433 223333221 12  222211  111110  0113689999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.|.
T Consensus        83 nnAg~   87 (235)
T 3l6e_A           83 HCAGT   87 (235)
T ss_dssp             EECCC
T ss_pred             ECCCC
Confidence            99884

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.23  E-value=0.0089  Score=51.19  Aligned_cols=74  Identities=22%  Similarity=0.206  Sum_probs=44.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcc-cccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~-~~~~~~~~~~d~v~d~~g~  229 (327)
                      ++..+|||+||+|.+|..+++.+...|.+|+++++....+.   ++.. .+..+-.+.. +.+...+..+|+||++.+.
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---l~~~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~   84 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKL---PNVE-MISLDIMDSQRVKKVISDIKPDYIFHLAAK   84 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCC---TTEE-EEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccc---ceee-EEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence            57778999999999999999988888999999886422121   2222 2211111111 1111111348999999884

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=95.22  E-value=0.078  Score=38.91  Aligned_cols=76  Identities=12%  Similarity=0.008  Sum_probs=47.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH-hcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK-SLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~-~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      +.+|+|+| .|.+|...++.+...|.+|++++++ ++.+.+. .++... +..+..+...+....-.++|+++.+++.+.
T Consensus         4 ~m~i~IiG-~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~-~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~   81 (140)
T 1lss_A            4 GMYIIIAG-IGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALV-INGDCTKIKTLEDAGIEDADMYIAVTGKEE   81 (140)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEE-EESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEE-EEcCCCCHHHHHHcCcccCCEEEEeeCCch
Confidence            45799998 6999999999888889999888854 4444443 455432 222222222221122246899999988653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.22  E-value=0.03  Score=50.69  Aligned_cols=77  Identities=18%  Similarity=0.226  Sum_probs=49.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---H-HHHHhcCCCEE-EeCCCCC--cccc---cCCCCCcccE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN---I-ELVKSLGADEV-LDYKTPD--GAAL---KSPSGRKYDA  222 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~-~~~~~lg~~~v-~~~~~~~--~~~~---~~~~~~~~d~  222 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+.++..   . +..+.++...+ .|-.+.+  ....   ....++.+|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            6789999999999999988888888999988875432   1 23345554322 2323322  1111   1112234999


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      +|++.|.
T Consensus       292 lV~nAGv  298 (454)
T 3u0b_A          292 LVNNAGI  298 (454)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999984

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.21  E-value=0.024  Score=49.22  Aligned_cols=76  Identities=18%  Similarity=0.208  Sum_probs=47.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-----cHHHH---HhcCCCEEE-eCCCCCcccccCCCCCcccEEE
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-----NIELV---KSLGADEVL-DYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-----~~~~~---~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      ..+|||+||+|.+|...++.+...|.+|++++++.     +.+.+   ...+...+. |..+.+ .+.+.....++|+||
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~-~l~~~~~~~~~d~Vi   88 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQE-AMEKILKEHEIDIVV   88 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHH-HHHHHHHHTTCCEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHH-HHHHHHhhCCCCEEE
Confidence            35799999999999999998888899999998643     22222   233443321 222211 111111112699999


Q ss_pred             eCCCCC
Q 020314          225 NCVTGI  230 (327)
Q Consensus       225 d~~g~~  230 (327)
                      .+.+..
T Consensus        89 ~~a~~~   94 (346)
T 3i6i_A           89 STVGGE   94 (346)
T ss_dssp             ECCCGG
T ss_pred             ECCchh
Confidence            999853

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.21  E-value=0.016  Score=47.47  Aligned_cols=34  Identities=15%  Similarity=0.104  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-------eEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNT-------HVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~-------~v~~~~~~  187 (327)
                      ++++||+||+|++|...++.+...|+       +|+.+.++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~   42 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRT   42 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCC
Confidence            46799999999999998888887888       88888865

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.20  E-value=0.054  Score=45.28  Aligned_cols=75  Identities=19%  Similarity=0.147  Sum_probs=47.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCC--C-EEE--eCCCCC--cccccCC--CCCcccEE
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGA--D-EVL--DYKTPD--GAALKSP--SGRKYDAV  223 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~--~-~v~--~~~~~~--~~~~~~~--~~~~~d~v  223 (327)
                      +++||+||+|++|.+.++.+...|++|+.++++ ++.+ ..+.+..  . ..+  |-.+.+  ....+..  .-+.+|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            689999999999999999888899999998865 3433 2233321  1 222  222221  1111111  11358999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus       102 vnnAG~  107 (272)
T 2nwq_A          102 INNAGL  107 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999984

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.18  E-value=0.031  Score=48.02  Aligned_cols=90  Identities=12%  Similarity=-0.019  Sum_probs=64.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      -.|.+|.|+| .|.+|...++.++.+|++|++..+ ..+.+.+..+|... .  .+ ..+..     ...|+|+.++...
T Consensus       144 l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~--~~-l~ell-----~~aDvVil~~p~~  213 (320)
T 1gdh_A          144 LDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATF-H--DS-LDSLL-----SVSQFFSLNAPST  213 (320)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEE-C--SS-HHHHH-----HHCSEEEECCCCC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEE-c--CC-HHHHH-----hhCCEEEEeccCc
Confidence            4788999999 899999999999999999999887 65445555667532 1  11 11122     2479999988742


Q ss_pred             c-----c-cccccccCCCcEEEeecCC
Q 020314          231 P-----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~-----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      .     + ...+..++++..++.++..
T Consensus       214 ~~t~~~i~~~~l~~mk~gailIn~arg  240 (320)
T 1gdh_A          214 PETRYFFNKATIKSLPQGAIVVNTARG  240 (320)
T ss_dssp             TTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             hHHHhhcCHHHHhhCCCCcEEEECCCC
Confidence            2     2 2355788999999988764

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.16  E-value=0.049  Score=48.58  Aligned_cols=96  Identities=14%  Similarity=0.132  Sum_probs=67.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      ...+|+|.| .|.+|..+++.++..|..|++++.+ ++.+.++..|...+. -+..+...++..+-..+|+++-+++++.
T Consensus         3 ~~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~-GDat~~~~L~~agi~~A~~viv~~~~~~   80 (413)
T 3l9w_A            3 HGMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFY-GDATRMDLLESAGAAKAEVLINAIDDPQ   80 (413)
T ss_dssp             -CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEE-SCTTCHHHHHHTTTTTCSEEEECCSSHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEE-cCCCCHHHHHhcCCCccCEEEECCCChH
Confidence            445699999 7999999999999999999999854 677778888876433 3333333444444457899999998754


Q ss_pred             ----ccccccccCCCcEEEeecC
Q 020314          232 ----WSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       232 ----~~~~~~~l~~~G~~v~~g~  250 (327)
                          +...++.+.+.-+++....
T Consensus        81 ~n~~i~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           81 TNLQLTEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEEES
T ss_pred             HHHHHHHHHHHhCCCCeEEEEEC
Confidence                2344456667767765443

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=95.16  E-value=0.034  Score=45.89  Aligned_cols=36  Identities=22%  Similarity=0.098  Sum_probs=32.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -+++++||+||++++|.+.++.+...|++|+.++++
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   45 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRN   45 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            368899999999999999998888899999998865

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=95.15  E-value=0.0055  Score=50.00  Aligned_cols=96  Identities=14%  Similarity=0.127  Sum_probs=59.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHH----hcCCC-EEEeCCCCCcccccCC-CCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVK----SLGAD-EVLDYKTPDGAALKSP-SGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~----~lg~~-~v~~~~~~~~~~~~~~-~~~~~d~v  223 (327)
                      .++.+||-.| +| .|..+..+++.. +.++++++. ++..+.++    ..|.. .+--............ ....||+|
T Consensus        53 ~~~~~vLdiG-~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I  130 (233)
T 2gpy_A           53 AAPARILEIG-TA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVL  130 (233)
T ss_dssp             HCCSEEEEEC-CT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred             cCCCEEEEec-CC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEE
Confidence            5778999998 44 788888999987 579999984 44444443    34542 1211111111111111 13569999


Q ss_pred             EeCCCCC----cccccccccCCCcEEEeec
Q 020314          224 INCVTGI----PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       224 ~d~~g~~----~~~~~~~~l~~~G~~v~~g  249 (327)
                      +......    .+..+.+.|+++|+++...
T Consensus       131 ~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          131 FIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             EEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             EECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            8765532    2677888999999998753

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.13  E-value=0.032  Score=49.27  Aligned_cols=89  Identities=12%  Similarity=-0.006  Sum_probs=63.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-  230 (327)
                      .|.+|.|+| .|.+|...++.++.+|++|++..+. .+.+.+..+|....   .+. .+.+     ...|+|+.++... 
T Consensus       190 ~gktvGIIG-lG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~---~~l-~ell-----~~aDvV~l~~Plt~  259 (393)
T 2nac_A          190 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH---ATR-EDMY-----PVCDVVTLNCPLHP  259 (393)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC---SSH-HHHG-----GGCSEEEECSCCCT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec---CCH-HHHH-----hcCCEEEEecCCch
Confidence            688999999 8999999999999999999988854 45566666675421   111 1222     2479999888732 


Q ss_pred             c----c-cccccccCCCcEEEeecCC
Q 020314          231 P----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      .    + ...+..|+++..+|.++..
T Consensus       260 ~t~~li~~~~l~~mk~gailIN~aRG  285 (393)
T 2nac_A          260 ETEHMINDETLKLFKRGAYIVNTARG  285 (393)
T ss_dssp             TTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             HHHHHhhHHHHhhCCCCCEEEECCCc
Confidence            1    2 2456788998888888753

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=95.12  E-value=0.019  Score=45.26  Aligned_cols=95  Identities=17%  Similarity=0.028  Sum_probs=57.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHHH----HhcCC-CEEEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIELV----KSLGA-DEVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~~----~~lg~-~~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      +++++||-.| +| .|..+..+++..+  .++++++.+ +..+.+    +..+. +.+ .....+.........+.+|+|
T Consensus        21 ~~~~~vLDlG-cG-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v-~~~~~d~~~~~~~~~~~fD~v   97 (197)
T 3eey_A           21 KEGDTVVDAT-CG-NGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRV-TLIKDGHQNMDKYIDCPVKAV   97 (197)
T ss_dssp             CTTCEEEESC-CT-TSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGE-EEECSCGGGGGGTCCSCEEEE
T ss_pred             CCCCEEEEcC-CC-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCe-EEEECCHHHHhhhccCCceEE
Confidence            7888999988 34 3788888888754  599999844 444333    34443 211 111111111111123579999


Q ss_pred             EeCCCC----------------CcccccccccCCCcEEEeec
Q 020314          224 INCVTG----------------IPWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       224 ~d~~g~----------------~~~~~~~~~l~~~G~~v~~g  249 (327)
                      +.+.+-                ..+..+.+.|+++|+++...
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~  139 (197)
T 3eey_A           98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI  139 (197)
T ss_dssp             EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence            865432                13667778999999998664

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.11  E-value=0.029  Score=49.11  Aligned_cols=90  Identities=11%  Similarity=0.008  Sum_probs=64.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      -.|.+|.|+| .|.+|...++.++.+|++ |++..+. .+.+.+..+|...+   .+ ..+..     ...|+|+.++..
T Consensus       162 l~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~---~~-l~ell-----~~aDvV~l~~P~  231 (364)
T 2j6i_A          162 IEGKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV---EN-IEELV-----AQADIVTVNAPL  231 (364)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC---SS-HHHHH-----HTCSEEEECCCC
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec---CC-HHHHH-----hcCCEEEECCCC
Confidence            3788999999 899999999999999997 9988854 45666667774321   11 11222     247999998875


Q ss_pred             C-----cc-cccccccCCCcEEEeecCC
Q 020314          230 I-----PW-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       230 ~-----~~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      .     .+ ...+..|++++.+|.++..
T Consensus       232 t~~t~~li~~~~l~~mk~ga~lIn~arG  259 (364)
T 2j6i_A          232 HAGTKGLINKELLSKFKKGAWLVNTARG  259 (364)
T ss_dssp             STTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             ChHHHHHhCHHHHhhCCCCCEEEECCCC
Confidence            3     12 2456789999999988754

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.08  E-value=0.0095  Score=48.20  Aligned_cols=33  Identities=33%  Similarity=0.274  Sum_probs=30.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+|||+||+|.+|...++.+...|.+|+++++.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~   37 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRH   37 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence            579999999999999999999999999999865

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.06  E-value=0.029  Score=46.99  Aligned_cols=71  Identities=17%  Similarity=0.230  Sum_probs=44.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHHHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|||+||+|.+|...++.+...  |.+|++++++ ++.+.+...+...+. |..+.+ .+.+..  .++|+||++.+.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~--~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEA-ALTSAL--QGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHH-HHHHHT--TTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHH-HHHHHH--hCCCEEEEeCCC
Confidence            4899999999999999888877  8899999864 443333333433221 222211 111111  358999999874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.04  E-value=0.029  Score=45.85  Aligned_cols=33  Identities=18%  Similarity=0.100  Sum_probs=29.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEE-ecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTAT-CGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~-~~~  187 (327)
                      +++||+||+|++|...++.+...|++|+++ .++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~   35 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQN   35 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence            579999999999999999888899999988 444

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.04  E-value=0.028  Score=46.80  Aligned_cols=33  Identities=15%  Similarity=0.229  Sum_probs=29.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      .++++||+||++++|.+.++.+...|++|+...
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~   57 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHY   57 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence            567899999999999999999888999997766

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.03  E-value=0.031  Score=48.56  Aligned_cols=89  Identities=18%  Similarity=0.109  Sum_probs=64.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-  230 (327)
                      .|.+|.|.| .|.+|...++.++.+|++|++..+. .+.+.++.+|...+   .+ ..+.+     ...|+|+-++... 
T Consensus       163 ~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~---~~-l~ell-----~~aDvV~l~~Plt~  232 (351)
T 3jtm_A          163 EGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV---ED-LNEML-----PKCDVIVINMPLTE  232 (351)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC---SC-HHHHG-----GGCSEEEECSCCCT
T ss_pred             cCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc---CC-HHHHH-----hcCCEEEECCCCCH
Confidence            688999999 8999999999999999999988854 45666667775432   11 11222     2379999888732 


Q ss_pred             c----c-cccccccCCCcEEEeecCC
Q 020314          231 P----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      .    + ...+..|+++..+|.++..
T Consensus       233 ~t~~li~~~~l~~mk~gailIN~aRG  258 (351)
T 3jtm_A          233 KTRGMFNKELIGKLKKGVLIVNNARG  258 (351)
T ss_dssp             TTTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred             HHHHhhcHHHHhcCCCCCEEEECcCc
Confidence            1    2 3556789999999988754

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.01  E-value=0.031  Score=49.17  Aligned_cols=74  Identities=19%  Similarity=0.053  Sum_probs=45.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcc-cccCCCCCcccEEEeCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~-~~~~~~~~~~d~v~d~~g~  229 (327)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++.. +.......+. .++..+-.+.. +.+..  .++|+||++.+.
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v-~~~~~Dl~d~~~~~~~~--~~~d~Vih~A~~  103 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCD-EFHLVDLRVMENCLKVT--EGVDHVFNLAAD  103 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCS-EEEECCTTSHHHHHHHH--TTCSEEEECCCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCc-eEEECCCCCHHHHHHHh--CCCCEEEECcee
Confidence            456899999999999999988888899999998642 2211111122 22222211211 11111  268999999873

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=95.01  E-value=0.049  Score=46.66  Aligned_cols=98  Identities=19%  Similarity=0.194  Sum_probs=60.8

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEec-CCcHHHH----HhcCCCEEEeCCCCC-ccccc
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATCG-ARNIELV----KSLGADEVLDYKTPD-GAALK  213 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~-~~~~~~~----~~lg~~~v~~~~~~~-~~~~~  213 (327)
                      ...++     +++++||-.| +|. |..+..+++..+  .+|++++. ++..+.+    +..|...+ .....+ .....
T Consensus        69 ~~l~~-----~~~~~VLDiG-cG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~d~~~~~~  140 (317)
T 1dl5_A           69 EWVGL-----DKGMRVLEIG-GGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCGDGYYGVP  140 (317)
T ss_dssp             HHTTC-----CTTCEEEEEC-CTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESCGGGCCG
T ss_pred             HhcCC-----CCcCEEEEec-CCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEECChhhccc
Confidence            45566     7899999999 454 888888888643  46999984 4444433    34454332 111111 11111


Q ss_pred             CCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeec
Q 020314          214 SPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g  249 (327)
                        ....+|+|+....-+. ...+.+.|+|+|+++..-
T Consensus       141 --~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          141 --EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             --GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             --cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence              1246999998766444 456778999999987653

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.00  E-value=0.028  Score=47.18  Aligned_cols=71  Identities=17%  Similarity=0.221  Sum_probs=45.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHHHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|||+||+|.+|...++.+...  |.+|++++++ ++.+.+...+...+. |..+.+ .+.+..  .++|+||++.+.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~-~l~~~~--~~~d~vi~~a~~   76 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPE-SLQKAF--AGVSKLLFISGP   76 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHH-HHHHHT--TTCSEEEECCCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHH-HHHHHH--hcCCEEEEcCCC
Confidence            5999999999999999888877  8899999864 444433333433221 222211 111111  258999999874

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=95.00  E-value=0.037  Score=47.49  Aligned_cols=35  Identities=14%  Similarity=0.111  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++|||+||+|++|.+.++.+...|++|+.++++
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~   41 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIR   41 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECC
Confidence            67899999999999999998888899999999865

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.00  E-value=0.055  Score=44.74  Aligned_cols=35  Identities=11%  Similarity=0.012  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHh---CCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKL---GNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~---~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+..   .|++|+.+++.
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~   42 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS   42 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCC
Confidence            577899999999999998877776   89999998865

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=94.98  E-value=0.07  Score=47.54  Aligned_cols=35  Identities=23%  Similarity=0.164  Sum_probs=29.0

Q ss_pred             CCCCeEEEEcCCChHHHH--HHHHHHhCCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLY--AVQLAKLGNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~--~~~la~~~g~~v~~~~~  186 (327)
                      ..++++||+||++++|++  .+..+...|++|+.+.+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r   94 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSY   94 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEec
Confidence            678999999999999998  55555566999998875

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=94.96  E-value=0.089  Score=42.48  Aligned_cols=95  Identities=15%  Similarity=0.090  Sum_probs=58.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHHHH----HhcCCC--EEEeCCCCCcccccCCCCCcccE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIELV----KSLGAD--EVLDYKTPDGAALKSPSGRKYDA  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~~~----~~lg~~--~v~~~~~~~~~~~~~~~~~~~d~  222 (327)
                      +++.+||-.|  .+.|..++.+++.+  +++|++++.+ +..+.+    +..|..  .+--...+..+.......+.||+
T Consensus        55 ~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~  132 (221)
T 3dr5_A           55 NGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQL  132 (221)
T ss_dssp             TTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEE
T ss_pred             CCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCe
Confidence            4556899888  56788899999976  5799999844 443333    345543  22111111112222222457999


Q ss_pred             EEeCCCCC----cccccccccCCCcEEEee
Q 020314          223 VINCVTGI----PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       223 v~d~~g~~----~~~~~~~~l~~~G~~v~~  248 (327)
                      ||-.....    .+..+.+.|+++|.++.-
T Consensus       133 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  162 (221)
T 3dr5_A          133 VFGQVSPMDLKALVDAAWPLLRRGGALVLA  162 (221)
T ss_dssp             EEECCCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred             EEEcCcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence            98544322    266778899999999863

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=94.96  E-value=0.045  Score=46.30  Aligned_cols=72  Identities=15%  Similarity=0.071  Sum_probs=45.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcH--HHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNI--ELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~--~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      ..+|||+||+|.+|...++.+...| .+|++++++ ++.  ..+...+...+. |..+.+ .+....  .++|.||++.+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~-~l~~~~--~~~d~vi~~a~   81 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQV-IMELAL--NGAYATFIVTN   81 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHH-HHHHHH--TTCSEEEECCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHH-HHHHHH--hcCCEEEEeCC
Confidence            4679999999999999998877777 899999865 332  223334443321 222211 111111  25899999987

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=94.95  E-value=0.083  Score=42.59  Aligned_cols=94  Identities=15%  Similarity=0.049  Sum_probs=58.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC------CeEEEEecC-CcHHHHH----hcC-----CCE--EEeCCCCCccccc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN------THVTATCGA-RNIELVK----SLG-----ADE--VLDYKTPDGAALK  213 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g------~~v~~~~~~-~~~~~~~----~lg-----~~~--v~~~~~~~~~~~~  213 (327)
                      +++++||-.| +|. |..+..+++..+      .+|++++.+ +..+.++    ..+     .+.  ++..+.  .....
T Consensus        79 ~~~~~VLdiG-~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~~~~~  154 (227)
T 2pbf_A           79 KPGSRAIDVG-SGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI--YQVNE  154 (227)
T ss_dssp             CTTCEEEEES-CTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG--GGCCH
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh--Hhccc
Confidence            7889999999 444 888889998876      599999844 4443332    333     221  221111  11100


Q ss_pred             --CCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeec
Q 020314          214 --SPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       214 --~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g  249 (327)
                        ......||+|+....-.. +..+.+.|+++|+++..-
T Consensus       155 ~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~  193 (227)
T 2pbf_A          155 EEKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPI  193 (227)
T ss_dssp             HHHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred             ccCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence              011246999987766443 678888999999987653

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=94.93  E-value=0.11  Score=43.56  Aligned_cols=67  Identities=9%  Similarity=0.068  Sum_probs=47.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .+|||+|+ |.+|...++.+...|.+|++++++ .+.+.+...+...+ ..+-.+   ..   -.++|+||++.+.
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~D~~d---~~---~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPL-LWPGEE---PS---LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEE-ESSSSC---CC---CTTCCEEEECCCC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEE-Eecccc---cc---cCCCCEEEECCCc
Confidence            47999997 999999999998889999999965 45555554444332 221111   11   2569999999974

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=94.92  E-value=0.048  Score=46.40  Aligned_cols=68  Identities=19%  Similarity=0.263  Sum_probs=43.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .+|||+||+|.+|..+++.+...|.+|+++++.. +.+ +.  +...+. |.. .+ .+.+..  .++|+||++.+.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~-~~-~~~~~~--~~~d~Vih~a~~   72 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DYEYRVSDYT-LE-DLINQL--NDVDAVVHLAAT   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HH-HHHHHT--TTCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ceEEEEcccc-HH-HHHHhh--cCCCEEEEcccc
Confidence            5799999999999999999998999999999653 222 22  222221 222 11 111111  269999999874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.92  E-value=0.046  Score=51.31  Aligned_cols=77  Identities=18%  Similarity=0.162  Sum_probs=49.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC----------CcHH----HHHhcCCCEEEeCCCCC--cccccC--
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA----------RNIE----LVKSLGADEVLDYKTPD--GAALKS--  214 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~----------~~~~----~~~~lg~~~v~~~~~~~--~~~~~~--  214 (327)
                      .++.++|+||++++|.+.++.+...|++|++.++.          ++.+    .++..|...+.|..+..  ....+.  
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            57889999999999999999998999999987632          2222    22334544445544432  111111  


Q ss_pred             CCCCcccEEEeCCCC
Q 020314          215 PSGRKYDAVINCVTG  229 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~  229 (327)
                      ..-+.+|+++++.|.
T Consensus        87 ~~~G~iDiLVnNAGi  101 (604)
T 2et6_A           87 KNFGTVHVIINNAGI  101 (604)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            011359999999984

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=94.91  E-value=0.2  Score=42.12  Aligned_cols=94  Identities=12%  Similarity=0.028  Sum_probs=56.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH-HHHhcCC----CEEEeCCCCC-cccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE-LVKSLGA----DEVLDYKTPD-GAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~-~~~~lg~----~~v~~~~~~~-~~~~~~~~~~~~d~v  223 (327)
                      -++++++|+| +|++|.+++..+...|+ +|+.+.++ ++.+ +++.++.    ..+...+..+ .+..     ..+|+|
T Consensus       125 l~~k~vlVlG-aGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l-----~~~DiV  198 (283)
T 3jyo_A          125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVI-----AAADGV  198 (283)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHH-----HHSSEE
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHH-----hcCCEE
Confidence            3688999999 59999999998888999 68777765 3433 3343321    1121111111 1111     248999


Q ss_pred             EeCCCCCc-----ccccccccCCCcEEEeecCC
Q 020314          224 INCVTGIP-----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       224 ~d~~g~~~-----~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ++|++...     .......++++..++++-..
T Consensus       199 InaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY~  231 (283)
T 3jyo_A          199 VNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYM  231 (283)
T ss_dssp             EECSSTTSTTSCSCSSCGGGCCTTCEEEECCCS
T ss_pred             EECCCCCCCCCCCCCCCHHHhCCCCEEEEecCC
Confidence            99997321     12224566777666776543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=94.91  E-value=0.028  Score=46.11  Aligned_cols=74  Identities=18%  Similarity=0.180  Sum_probs=44.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHh-CCCeEEEEecCCcHHHHHhcCCCEEE--eCCCCC--cccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKL-GNTHVTATCGARNIELVKSLGADEVL--DYKTPD--GAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~-~g~~v~~~~~~~~~~~~~~lg~~~v~--~~~~~~--~~~~~~~~~~~~d~v~d~  226 (327)
                      .+++++||+||++++|.+.++.+.. .|++|+...+.+.... ..+   ..+  |-.+.+  .+..+.....++|+++++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-~~~---~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-ENL---KFIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-TTE---EEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-ccc---eEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            3577899999999999998876665 6778888775432110 000   122  222221  111222223479999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        78 Ag~   80 (244)
T 4e4y_A           78 AGI   80 (244)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            984

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=94.90  E-value=0.022  Score=46.65  Aligned_cols=34  Identities=15%  Similarity=0.134  Sum_probs=29.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-ecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTAT-CGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~-~~~  187 (327)
                      ++++||+||+|++|...++.+...|++|+++ .++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~   35 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARS   35 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence            4679999999999999999888899999985 444

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=94.90  E-value=0.013  Score=51.10  Aligned_cols=35  Identities=17%  Similarity=0.238  Sum_probs=28.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGN-THVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~  187 (327)
                      ++.+|||+||+|.+|..+++.+...| .+|+++.+.
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   80 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL   80 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence            45679999999999999998888889 799998865

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=94.89  E-value=0.027  Score=45.58  Aligned_cols=91  Identities=14%  Similarity=0.139  Sum_probs=57.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-------CeEEEEecC-CcHHHHH----hcC-----CC--EEEeCCCCCcccc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN-------THVTATCGA-RNIELVK----SLG-----AD--EVLDYKTPDGAAL  212 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g-------~~v~~~~~~-~~~~~~~----~lg-----~~--~v~~~~~~~~~~~  212 (327)
                      +++++||-.| +|. |..+..+++..+       .+|++++.+ +..+.++    ..+     .+  .++..+.  ... 
T Consensus        83 ~~~~~VLdiG-~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~~~-  157 (227)
T 1r18_A           83 KPGARILDVG-SGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG--RKG-  157 (227)
T ss_dssp             CTTCEEEEES-CTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG--GGC-
T ss_pred             CCCCEEEEEC-CCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc--ccC-
Confidence            7889999998 454 888888888765       489999844 3333332    222     11  2221111  111 


Q ss_pred             cCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEee
Q 020314          213 KSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       213 ~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~  248 (327)
                       ......||+|+.+..-.. ...+.+.|+++|+++..
T Consensus       158 -~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~  193 (227)
T 1r18_A          158 -YPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  193 (227)
T ss_dssp             -CGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -CCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence             111246999997776444 67888899999998764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=94.89  E-value=0.05  Score=46.44  Aligned_cols=72  Identities=22%  Similarity=0.201  Sum_probs=46.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHHHH---HhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIELV---KSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~~~---~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .+|||+||+|.+|...++.+...|.+|++++++.  +.+.+   ...+...+. |..+.+ .+.+..  .++|.||++.+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~-~l~~a~--~~~d~vi~~a~   88 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHE-KLVELM--KKVDVVISALA   88 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHH-HHHHHH--TTCSEEEECCC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHH-HHHHHH--cCCCEEEECCc
Confidence            4699999999999999998888899999998652  33322   234543321 222211 111111  25899999988


Q ss_pred             C
Q 020314          229 G  229 (327)
Q Consensus       229 ~  229 (327)
                      .
T Consensus        89 ~   89 (318)
T 2r6j_A           89 F   89 (318)
T ss_dssp             G
T ss_pred             h
Confidence            4

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=94.88  E-value=0.044  Score=45.58  Aligned_cols=35  Identities=20%  Similarity=0.251  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.+.++
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~   41 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARD   41 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999999888899999988865

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=94.88  E-value=0.069  Score=47.74  Aligned_cols=37  Identities=22%  Similarity=0.248  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      .++.+|||+||+|.+|..+++.+...|.+|+++++..
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~  103 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRAD  103 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECS
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCC
Confidence            4567899999999999999988877889999998653

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=94.88  E-value=0.048  Score=45.63  Aligned_cols=96  Identities=15%  Similarity=0.085  Sum_probs=61.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEec-CCcHHHHH----hc-CCCEEEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCG-ARNIELVK----SL-GADEVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~-~~~~~~~~----~l-g~~~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      +++++||-.| +| .|..+..+++..  +.++++++. ++..+.++    .. |.+.+--...+-..   ......+|+|
T Consensus       109 ~~~~~VLD~G-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~---~~~~~~fD~V  183 (275)
T 1yb2_A          109 RPGMDILEVG-VG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD---FISDQMYDAV  183 (275)
T ss_dssp             CTTCEEEEEC-CT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---CCCSCCEEEE
T ss_pred             CCcCEEEEec-CC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc---cCcCCCccEE
Confidence            7889999998 34 677888888863  579999984 44444443    33 53322111111111   1223569999


Q ss_pred             EeCCCCC--cccccccccCCCcEEEeecCCc
Q 020314          224 INCVTGI--PWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       224 ~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      +.....+  .+..+.+.|+++|+++......
T Consensus       184 i~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~  214 (275)
T 1yb2_A          184 IADIPDPWNHVQKIASMMKPGSVATFYLPNF  214 (275)
T ss_dssp             EECCSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred             EEcCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence            9866543  3777888999999998877654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=94.87  E-value=0.044  Score=44.80  Aligned_cols=36  Identities=25%  Similarity=0.325  Sum_probs=31.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+++++||+||+|++|.+.++.+...|++|+.++++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV   40 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            467889999999999999999988899999998865

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=94.86  E-value=0.083  Score=46.09  Aligned_cols=87  Identities=10%  Similarity=0.014  Sum_probs=62.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-c
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-P  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~  231 (327)
                      .|++|.|+| .|.+|...++.++.+|++|++..+..+.+.+...|...    .+. .+..     ...|+|+-++... .
T Consensus       175 ~gktvGIIG-lG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~----~~l-~ell-----~~aDvV~l~~Plt~~  243 (365)
T 4hy3_A          175 AGSEIGIVG-FGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEP----ASL-EDVL-----TKSDFIFVVAAVTSE  243 (365)
T ss_dssp             SSSEEEEEC-CSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEE----CCH-HHHH-----HSCSEEEECSCSSCC
T ss_pred             CCCEEEEec-CCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeee----CCH-HHHH-----hcCCEEEEcCcCCHH
Confidence            588999999 89999999999999999999988655555556666532    111 1222     2378888877632 1


Q ss_pred             ----c-cccccccCCCcEEEeecC
Q 020314          232 ----W-STFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       232 ----~-~~~~~~l~~~G~~v~~g~  250 (327)
                          + ...+..+++++.+|.++.
T Consensus       244 T~~li~~~~l~~mk~gailIN~aR  267 (365)
T 4hy3_A          244 NKRFLGAEAFSSMRRGAAFILLSR  267 (365)
T ss_dssp             ---CCCHHHHHTSCTTCEEEECSC
T ss_pred             HHhhcCHHHHhcCCCCcEEEECcC
Confidence                2 355678999999998874

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=94.85  E-value=0.06  Score=44.19  Aligned_cols=74  Identities=19%  Similarity=0.247  Sum_probs=51.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCc--ccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVKSLGADEVLDYKTPDG--AALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~--~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|.|.|++|.+|...++.+... +.+++++.+ .+..+.+....+|-++|++.++.  .........+.++|+.++|-
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence            5899998899999999888755 788887763 34444333346788888886652  22222233568899988873

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=94.85  E-value=0.036  Score=46.67  Aligned_cols=35  Identities=26%  Similarity=0.275  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|++++++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~   61 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARS   61 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            56789999999999999999888889999999865

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=94.84  E-value=0.028  Score=48.86  Aligned_cols=89  Identities=16%  Similarity=-0.009  Sum_probs=60.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-c
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-P  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~  231 (327)
                      .|.+|.|.| .|.+|...++.++.+|++|++..+....+..+.+|...+   .+ ..+..     ...|+|+-++... .
T Consensus       167 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~---~~-l~ell-----~~aDvV~l~~P~t~~  236 (347)
T 1mx3_A          167 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRV---ST-LQDLL-----FHSDCVTLHCGLNEH  236 (347)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEEC---SS-HHHHH-----HHCSEEEECCCCCTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeec---CC-HHHHH-----hcCCEEEEcCCCCHH
Confidence            688999999 899999999999999999998875432233455665321   11 11122     2378998887642 1


Q ss_pred             ----c-cccccccCCCcEEEeecCC
Q 020314          232 ----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 ----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                          + ...++.++++..+|.++..
T Consensus       237 t~~li~~~~l~~mk~gailIN~arg  261 (347)
T 1mx3_A          237 NHHLINDFTVKQMRQGAFLVNTARG  261 (347)
T ss_dssp             CTTSBSHHHHTTSCTTEEEEECSCT
T ss_pred             HHHHhHHHHHhcCCCCCEEEECCCC
Confidence                2 3456788898899888754

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=94.83  E-value=0.13  Score=45.12  Aligned_cols=77  Identities=21%  Similarity=0.189  Sum_probs=50.1

Q ss_pred             CCCCeEEEEcCCChHHHHH-HHHHHhCCCeEEEEecC----Cc-------------HHHHHhcCCCE-EEeCCCCCc---
Q 020314          152 GQQKNILITAASGAVGLYA-VQLAKLGNTHVTATCGA----RN-------------IELVKSLGADE-VLDYKTPDG---  209 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~-~~la~~~g~~v~~~~~~----~~-------------~~~~~~lg~~~-v~~~~~~~~---  209 (327)
                      ..++++||+|+++++|++. +.+|...|+.++++...    ++             .+.+++.|... .++.+-.+.   
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            5688999999999999974 56666779988888732    11             13445566543 344443331   


Q ss_pred             -----ccccCCCCCcccEEEeCCCCC
Q 020314          210 -----AALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       210 -----~~~~~~~~~~~d~v~d~~g~~  230 (327)
                           .+.+  ..+++|+++.+.+..
T Consensus       128 ~~vi~~i~~--~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          128 AQVIEEAKK--KGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHH--TTCCEEEEEECCCCS
T ss_pred             HHHHHHHHH--hcCCCCEEEEecccc
Confidence                 1222  235799999999854

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=94.82  E-value=0.026  Score=49.45  Aligned_cols=74  Identities=12%  Similarity=0.059  Sum_probs=45.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-CcHHHHHh-cCCCEEEeCCCC-Ccc-cccCCCCCcccEEEeCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGA-RNIELVKS-LGADEVLDYKTP-DGA-ALKSPSGRKYDAVINCV  227 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~-~~~~~~~~-lg~~~v~~~~~~-~~~-~~~~~~~~~~d~v~d~~  227 (327)
                      .+.+|||+||+|.+|..+++.+... |.+|+++++. ++.+.+.. .+.. ++..+-. +.. +.+..  .++|+||++.
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~-~~~~Dl~~d~~~~~~~~--~~~d~Vih~A   99 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMH-FFEGDITINKEWVEYHV--KKCDVILPLV   99 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEE-EEECCTTTCHHHHHHHH--HHCSEEEECB
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeE-EEeCccCCCHHHHHHHh--ccCCEEEEcC
Confidence            4568999999999999988877766 8899999965 33332222 2222 2222211 211 11111  2689999988


Q ss_pred             CC
Q 020314          228 TG  229 (327)
Q Consensus       228 g~  229 (327)
                      +.
T Consensus       100 ~~  101 (372)
T 3slg_A          100 AI  101 (372)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=94.82  E-value=0.037  Score=46.50  Aligned_cols=92  Identities=10%  Similarity=-0.007  Sum_probs=56.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      +++.+||-.| +| .|..+..+++..|++|++++. ++..+.++    ..+...-+.....+..  . .. +.+|+|+..
T Consensus        63 ~~~~~vLDiG-cG-~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~--~-~~-~~fD~v~~~  136 (287)
T 1kpg_A           63 QPGMTLLDVG-CG-WGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE--Q-FD-EPVDRIVSI  136 (287)
T ss_dssp             CTTCEEEEET-CT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG--G-CC-CCCSEEEEE
T ss_pred             CCcCEEEEEC-Cc-ccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh--h-CC-CCeeEEEEe
Confidence            7889999998 33 488888888777899999984 44444443    2332211111111111  1 11 569999864


Q ss_pred             -----CCCC----cccccccccCCCcEEEeec
Q 020314          227 -----VTGI----PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       227 -----~g~~----~~~~~~~~l~~~G~~v~~g  249 (327)
                           .+.+    .+..+.+.|+|+|+++...
T Consensus       137 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  168 (287)
T 1kpg_A          137 GAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  168 (287)
T ss_dssp             SCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             CchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence                 2211    2567778999999998654

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=94.80  E-value=0.05  Score=44.02  Aligned_cols=92  Identities=14%  Similarity=0.119  Sum_probs=57.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHh----cCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKS----LGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      +++.+||-.| +|. |..+..+++.. .++++++. ++..+.+++    .+...++..+.  ....  .....+|+|+..
T Consensus        69 ~~~~~vLdiG-~G~-G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~--~~~~--~~~~~fD~v~~~  141 (231)
T 1vbf_A           69 HKGQKVLEIG-TGI-GYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDG--TLGY--EEEKPYDRVVVW  141 (231)
T ss_dssp             CTTCEEEEEC-CTT-SHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG--GGCC--GGGCCEEEEEES
T ss_pred             CCCCEEEEEc-CCC-CHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc--cccc--ccCCCccEEEEC
Confidence            7889999998 453 88888888864 79999984 444554442    22111221111  1111  123569999977


Q ss_pred             CCCCc-ccccccccCCCcEEEeecC
Q 020314          227 VTGIP-WSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       227 ~g~~~-~~~~~~~l~~~G~~v~~g~  250 (327)
                      ..-.. ...+.+.|+++|+++..-.
T Consensus       142 ~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          142 ATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             SBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             CcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            65443 5677889999999986643

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=94.80  E-value=0.048  Score=43.53  Aligned_cols=93  Identities=25%  Similarity=0.299  Sum_probs=59.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      .++.+||-.|+ | .|..+..+++. |.++++++. ++..+.+++.+...+- ....+....  ...+.+|+|+.+..-.
T Consensus        45 ~~~~~vLdiG~-G-~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~-~~~~d~~~~--~~~~~~D~v~~~~~l~  118 (218)
T 3ou2_A           45 NIRGDVLELAS-G-TGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGLDNVE-FRQQDLFDW--TPDRQWDAVFFAHWLA  118 (218)
T ss_dssp             TSCSEEEEESC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCCTTEE-EEECCTTSC--CCSSCEEEEEEESCGG
T ss_pred             CCCCeEEEECC-C-CCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCCCCeE-EEecccccC--CCCCceeEEEEechhh
Confidence            67889999983 3 47777888877 889999984 4566667665533221 111111111  2346799998654321


Q ss_pred             ---------cccccccccCCCcEEEeecC
Q 020314          231 ---------PWSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       231 ---------~~~~~~~~l~~~G~~v~~g~  250 (327)
                               .+..+.+.|+++|+++....
T Consensus       119 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          119 HVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence                     15566689999999987653

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.76  E-value=0.031  Score=44.56  Aligned_cols=35  Identities=23%  Similarity=0.243  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT--HVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~  187 (327)
                      .+.+|||+||+|.+|...++.+...|.  +|++++++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~   40 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK   40 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSS
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence            356899999999999999999998897  99988865

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=94.74  E-value=0.057  Score=46.57  Aligned_cols=31  Identities=19%  Similarity=0.208  Sum_probs=28.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +|||+||+|.+|..+++.+...|.+|+++++
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r   33 (347)
T 1orr_A            3 KLLITGGCGFLGSNLASFALSQGIDLIVFDN   33 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEeCCCchhHHHHHHHHHhCCCEEEEEeC
Confidence            6999999999999999888888999999985

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=94.73  E-value=0.059  Score=49.48  Aligned_cols=75  Identities=16%  Similarity=0.161  Sum_probs=48.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCC----cH----HHHHhcCCCE-EEeCCCCCc----ccccCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGAR----NI----ELVKSLGADE-VLDYKTPDG----AALKSPSG  217 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~~----~~----~~~~~lg~~~-v~~~~~~~~----~~~~~~~~  217 (327)
                      +++.++||+||+|++|...++.+...|+ +++.+.++.    +.    +.++..|... ++..+-.+.    +.++.   
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence            6788999999999999999988888898 577777542    22    2233445432 222221121    12222   


Q ss_pred             CcccEEEeCCCC
Q 020314          218 RKYDAVINCVTG  229 (327)
Q Consensus       218 ~~~d~v~d~~g~  229 (327)
                      ..+|.||++.|.
T Consensus       334 ~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 YPPNAVFHTAGI  345 (511)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCcEEEECCcc
Confidence            468999999984

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=94.73  E-value=0.065  Score=48.65  Aligned_cols=89  Identities=16%  Similarity=-0.013  Sum_probs=62.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      -.|.+|.|.| .|.+|..+++.++.+|++|++..+.. +...+...|.. +.   . -.+.+     ...|+|+.+++..
T Consensus       275 L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~-~~---~-l~ell-----~~aDiVi~~~~t~  343 (494)
T 3d64_A          275 IAGKIAVVAG-YGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYR-VV---T-MEYAA-----DKADIFVTATGNY  343 (494)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCE-EC---C-HHHHT-----TTCSEEEECSSSS
T ss_pred             cCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCE-eC---C-HHHHH-----hcCCEEEECCCcc
Confidence            4788999999 89999999999999999999988653 32233444543 11   1 01111     3479999988644


Q ss_pred             c-c-cccccccCCCcEEEeecCC
Q 020314          231 P-W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~-~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      . + ...++.++++..++.++..
T Consensus       344 ~lI~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          344 HVINHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             CSBCHHHHHHCCTTEEEEECSSS
T ss_pred             cccCHHHHhhCCCCcEEEEcCCC
Confidence            3 3 3567889999999988754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=94.73  E-value=0.052  Score=47.63  Aligned_cols=35  Identities=17%  Similarity=0.179  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGN-THVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~  187 (327)
                      ++.+|||+||+|.+|..+++.+...| .+|+++++.
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   66 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNL   66 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECC
Confidence            45689999999999999998888889 899999864

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=94.73  E-value=0.035  Score=46.67  Aligned_cols=35  Identities=20%  Similarity=0.112  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.++++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~   66 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRR   66 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            68899999999999999998888899999998865

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.71  E-value=0.038  Score=45.03  Aligned_cols=35  Identities=14%  Similarity=0.175  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~   36 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLS   36 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            35689999999999999999988899999998865

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=94.71  E-value=0.032  Score=47.58  Aligned_cols=35  Identities=23%  Similarity=0.206  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   40 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDL   40 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecC
Confidence            46789999999999999999988889999999864

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=94.70  E-value=0.04  Score=45.86  Aligned_cols=35  Identities=17%  Similarity=0.185  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||++++|.+.++.+...|++|+.+.++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   53 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRD   53 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999999988999999998865

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=94.69  E-value=0.037  Score=48.15  Aligned_cols=35  Identities=17%  Similarity=0.155  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   42 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLT   42 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCC
Confidence            45689999999999999998888889999999864

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=94.66  E-value=0.058  Score=46.08  Aligned_cols=73  Identities=15%  Similarity=0.229  Sum_probs=46.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-------cHHHH---HhcCCCEE-EeCCCCCcccccCCCCCcccE
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-------NIELV---KSLGADEV-LDYKTPDGAALKSPSGRKYDA  222 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-------~~~~~---~~lg~~~v-~~~~~~~~~~~~~~~~~~~d~  222 (327)
                      ..+|+|+||+|.+|...++.+...|.+|++++++.       +.+.+   ...+...+ .|..+.+ .+.+..  .++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~-~l~~a~--~~~d~   80 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHE-KMVSVL--KQVDI   80 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHH-HHHHHH--TTCSE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHH-HHHHHH--cCCCE
Confidence            45699999999999999988888899999988653       22222   23344322 1222221 111111  25899


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ||++.+.
T Consensus        81 vi~~a~~   87 (321)
T 3c1o_A           81 VISALPF   87 (321)
T ss_dssp             EEECCCG
T ss_pred             EEECCCc
Confidence            9999985

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=94.64  E-value=0.02  Score=49.02  Aligned_cols=91  Identities=14%  Similarity=0.149  Sum_probs=61.3

Q ss_pred             CeEEEEcCCChHHHHHHHHH-H-hCCCeEEEEec-C-Cc--HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          155 KNILITAASGAVGLYAVQLA-K-LGNTHVTATCG-A-RN--IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la-~-~~g~~v~~~~~-~-~~--~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      -+|.|.| +|.+|...+..+ + ..+.+++++++ . ++  ++.++.+|.....   .....++..+...++|+||++++
T Consensus         5 irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~---~~~e~ll~~~~~~~iDvV~~atp   80 (312)
T 1nvm_B            5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY---AGVEGLIKLPEFADIDFVFDATS   80 (312)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES---SHHHHHHHSGGGGGEEEEEECSC
T ss_pred             CEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc---CCHHHHHhccCCCCCcEEEECCC
Confidence            4799999 899999888777 4 45678887774 2 45  4666788865221   11122333333356999999999


Q ss_pred             CCc-ccccccccCC--CcEEEeec
Q 020314          229 GIP-WSTFEPNLGT--TGKVIDFN  249 (327)
Q Consensus       229 ~~~-~~~~~~~l~~--~G~~v~~g  249 (327)
                      ... .+.+..+++.  +.++++..
T Consensus        81 ~~~h~~~a~~al~a~~Gk~Vi~ek  104 (312)
T 1nvm_B           81 ASAHVQNEALLRQAKPGIRLIDLT  104 (312)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             hHHHHHHHHHHHHhCCCCEEEEcC
Confidence            654 6677778877  88887743

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=94.63  E-value=0.077  Score=44.01  Aligned_cols=35  Identities=23%  Similarity=0.242  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+  +++|.+.++.+...|++|+.+++.
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~   55 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYAS   55 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSS
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCC
Confidence            67899999999  899999998888889999988754

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=94.62  E-value=0.075  Score=41.27  Aligned_cols=94  Identities=15%  Similarity=0.042  Sum_probs=56.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      +++++||=.| +| .|..+..+++. +.+|++++. ++..+.+    +..+.+.+--.. .+...+.......||+|+-+
T Consensus        21 ~~~~~vLDiG-cG-~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~~~l~~~~~~~fD~v~~~   96 (185)
T 3mti_A           21 DDESIVVDAT-MG-NGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGHENLDHYVREPIRAAIFN   96 (185)
T ss_dssp             CTTCEEEESC-CT-TSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCGGGGGGTCCSCEEEEEEE
T ss_pred             CCCCEEEEEc-CC-CCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcHHHHHhhccCCcCEEEEe
Confidence            7889999888 33 58888888888 889999994 4443333    334433221111 11111111124569999865


Q ss_pred             CCC----------------CcccccccccCCCcEEEeec
Q 020314          227 VTG----------------IPWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       227 ~g~----------------~~~~~~~~~l~~~G~~v~~g  249 (327)
                      .+-                ..+..+.+.|+|+|+++...
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  135 (185)
T 3mti_A           97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI  135 (185)
T ss_dssp             EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence            321                01356668999999997654

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=94.62  E-value=0.076  Score=41.62  Aligned_cols=93  Identities=15%  Similarity=0.068  Sum_probs=55.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC----------CeEEEEecCCcHHHHHhcCCCEEE-eCCCCCcc----cccCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN----------THVTATCGARNIELVKSLGADEVL-DYKTPDGA----ALKSPS  216 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g----------~~v~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~----~~~~~~  216 (327)
                      +++++||..| +|. |..+..+++..|          .+|++++.++...    +.....+ ..+-....    ......
T Consensus        21 ~~~~~vLDlG-cG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~   94 (196)
T 2nyu_A           21 RPGLRVLDCG-AAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP----LEGATFLCPADVTDPRTSQRILEVLP   94 (196)
T ss_dssp             CTTCEEEEET-CCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC----CTTCEEECSCCTTSHHHHHHHHHHSG
T ss_pred             CCCCEEEEeC-CCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc----CCCCeEEEeccCCCHHHHHHHHHhcC
Confidence            7889999999 566 899999999876          6899988443211    1111222 11111100    111122


Q ss_pred             CCcccEEEe-----CCCC-------------CcccccccccCCCcEEEeecC
Q 020314          217 GRKYDAVIN-----CVTG-------------IPWSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       217 ~~~~d~v~d-----~~g~-------------~~~~~~~~~l~~~G~~v~~g~  250 (327)
                      +..+|+|+.     +++.             ..+..+.+.|+++|+++....
T Consensus        95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence            346999995     3332             125567789999999987643

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=94.60  E-value=0.056  Score=45.33  Aligned_cols=35  Identities=14%  Similarity=0.127  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||++++|.+.++.+...|++|+.+++.
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   44 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN   44 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999999888899999998865

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=94.60  E-value=0.15  Score=42.29  Aligned_cols=86  Identities=12%  Similarity=0.073  Sum_probs=57.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-Cc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      ++ +++|.| +|.+|.+.+..+...|++|++..++ ++ .++++.++..  .  .  +.   ...  ...|+|+.|++..
T Consensus       116 ~~-~v~iiG-~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~--~--~~---~~~--~~~Divi~~tp~~  182 (263)
T 2d5c_A          116 KG-PALVLG-AGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--A--V--PL---EKA--REARLLVNATRVG  182 (263)
T ss_dssp             CS-CEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--E--C--CG---GGG--GGCSEEEECSSTT
T ss_pred             CC-eEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--h--h--hH---hhc--cCCCEEEEccCCC
Confidence            56 899999 7999999999988889877766654 34 3455566653  1  1  11   111  3589999999865


Q ss_pred             ccc---c--cccccCCCcEEEeecCC
Q 020314          231 PWS---T--FEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~~~---~--~~~~l~~~G~~v~~g~~  251 (327)
                      ...   .  ....++++..+++++..
T Consensus       183 ~~~~~~~~l~~~~l~~g~~viD~~~~  208 (263)
T 2d5c_A          183 LEDPSASPLPAELFPEEGAAVDLVYR  208 (263)
T ss_dssp             TTCTTCCSSCGGGSCSSSEEEESCCS
T ss_pred             CCCCCCCCCCHHHcCCCCEEEEeecC
Confidence            321   1  14567777788887754

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=94.58  E-value=0.11  Score=47.85  Aligned_cols=64  Identities=16%  Similarity=0.148  Sum_probs=44.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +.+|||+||+|.+|..+++.+...|.+|+++++.. +.+       ....|..+.....   .  .++|+||++.+.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~-------~v~~d~~~~~~~~---l--~~~D~Vih~A~~  211 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG-------KRFWDPLNPASDL---L--DGADVLVHLAGE  211 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT-------CEECCTTSCCTTT---T--TTCSEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc-------ceeecccchhHHh---c--CCCCEEEECCCC
Confidence            67899999999999999999988899999999653 321       0111211111111   1  468999999874

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=94.57  E-value=0.16  Score=42.83  Aligned_cols=91  Identities=16%  Similarity=0.108  Sum_probs=56.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH-HHHHhcCC----CE--EEeCCCCCcccccCCCCCcccEEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI-ELVKSLGA----DE--VLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~-~~~~~lg~----~~--v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      .+++++|+|+ |++|.+++..+...| +|+...++ ++. ++++.++.    ..  .++..+    ..+  .-+.+|+++
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~----~~~--~~~~~DilV  198 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG----LDV--DLDGVDIII  198 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC----TTC--CCTTCCEEE
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee----HHH--hhCCCCEEE
Confidence            5789999995 699999999999899 88887765 333 23333321    00  011111    011  114689999


Q ss_pred             eCCCCCccc------c-cccccCCCcEEEeecCC
Q 020314          225 NCVTGIPWS------T-FEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       225 d~~g~~~~~------~-~~~~l~~~G~~v~~g~~  251 (327)
                      +++|.....      . ..+.++++..++++...
T Consensus       199 n~ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~  232 (287)
T 1nvt_A          199 NATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYN  232 (287)
T ss_dssp             ECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCS
T ss_pred             ECCCCCCCCCCCCCCCCCHHHcCCCCEEEEeeeC
Confidence            999854321      1 24567777788888753

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=94.56  E-value=0.045  Score=47.33  Aligned_cols=32  Identities=16%  Similarity=0.128  Sum_probs=28.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .+|||+||+|.+|..+++.+...|.+|+++++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r   34 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN   34 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence            57999999999999999888888999999875

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=94.55  E-value=0.06  Score=44.64  Aligned_cols=35  Identities=23%  Similarity=0.176  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+.++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMN   40 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999988899999988865

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=94.53  E-value=0.048  Score=45.24  Aligned_cols=35  Identities=37%  Similarity=0.343  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|.+.++.+...|++|+.++++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   61 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRS   61 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57789999999999999999888889999999865

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=94.50  E-value=0.051  Score=44.99  Aligned_cols=35  Identities=17%  Similarity=0.041  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|.+.++.+...|++|+.++++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   38 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRH   38 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999888899999988865

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.48  E-value=0.47  Score=40.18  Aligned_cols=89  Identities=11%  Similarity=-0.018  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-  231 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-  231 (327)
                      ..+|.|.| .|.+|...+..+...|.+|++..++ ++.+.+.+.|.........   +..     ...|+||-|+..+. 
T Consensus         7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~---e~~-----~~aDvvi~~vp~~~~   77 (303)
T 3g0o_A            7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAR---EFA-----GVVDALVILVVNAAQ   77 (303)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSST---TTT-----TTCSEEEECCSSHHH
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHH---HHH-----hcCCEEEEECCCHHH
Confidence            35799999 8999999988888889999988854 5666666667654121111   111     34799999998642 


Q ss_pred             c-------cccccccCCCcEEEeecCC
Q 020314          232 W-------STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 ~-------~~~~~~l~~~G~~v~~g~~  251 (327)
                      .       ......++++..+++.+..
T Consensus        78 ~~~v~~~~~~l~~~l~~g~ivv~~st~  104 (303)
T 3g0o_A           78 VRQVLFGEDGVAHLMKPGSAVMVSSTI  104 (303)
T ss_dssp             HHHHHC--CCCGGGSCTTCEEEECSCC
T ss_pred             HHHHHhChhhHHhhCCCCCEEEecCCC
Confidence            2       3445677788888887654

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=94.46  E-value=0.14  Score=41.47  Aligned_cols=94  Identities=16%  Similarity=0.056  Sum_probs=57.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcHHHHHhcCC--CEE--EeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNIELVKSLGA--DEV--LDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~~~~~~lg~--~~v--~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      +++++||-.| +|. |..+..+++..| .+|++++.+ +..+.+++...  +.+  +..+........... ..+|+|+.
T Consensus        73 ~~~~~VLDlG-cG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~  149 (230)
T 1fbn_A           73 KRDSKILYLG-ASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYE  149 (230)
T ss_dssp             CTTCEEEEES-CCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEE
T ss_pred             CCCCEEEEEc-ccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEE
Confidence            6888999998 454 888889999876 599999844 44444432211  111  111111110001112 46999996


Q ss_pred             CCCCC----c-ccccccccCCCcEEEee
Q 020314          226 CVTGI----P-WSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       226 ~~g~~----~-~~~~~~~l~~~G~~v~~  248 (327)
                      ....+    . +..+.+.|+|+|+++..
T Consensus       150 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          150 DVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            65544    2 66777899999999875

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=94.38  E-value=0.16  Score=46.28  Aligned_cols=75  Identities=16%  Similarity=0.204  Sum_probs=47.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC----CcH----HHHHhcCCCEEE-eC--CCCC--cccccCC-CCCc
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNT-HVTATCGA----RNI----ELVKSLGADEVL-DY--KTPD--GAALKSP-SGRK  219 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~----~~~----~~~~~lg~~~v~-~~--~~~~--~~~~~~~-~~~~  219 (327)
                      .++||+||+|++|...++.+...|+ +++.+.++    ++.    +.++..|....+ ..  .+.+  ...++.. ...+
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~  319 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAP  319 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSC
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            8999999999999998888888898 67766653    122    233456654322 22  2211  1122211 1246


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|.+|++.|.
T Consensus       320 ld~vVh~AGv  329 (496)
T 3mje_A          320 LTAVFHSAGV  329 (496)
T ss_dssp             EEEEEECCCC
T ss_pred             CeEEEECCcc
Confidence            9999999984

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=94.37  E-value=0.15  Score=46.43  Aligned_cols=78  Identities=18%  Similarity=0.222  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCC----cH----HHHHhcCCCE-EE--eCCCCC--cccccCC-C
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGAR----NI----ELVKSLGADE-VL--DYKTPD--GAALKSP-S  216 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~~----~~----~~~~~lg~~~-v~--~~~~~~--~~~~~~~-~  216 (327)
                      +++.++||+||+|++|...++.+...|+ +|+.+.++.    +.    +.++..|... ++  |-.+.+  ...++.. .
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            6789999999999999998887777798 488777542    11    2234556432 22  222211  1122111 1


Q ss_pred             CCcccEEEeCCCC
Q 020314          217 GRKYDAVINCVTG  229 (327)
Q Consensus       217 ~~~~d~v~d~~g~  229 (327)
                      ...+|.||++.|.
T Consensus       304 ~g~ld~VIh~AG~  316 (486)
T 2fr1_A          304 DVPLSAVFHAAAT  316 (486)
T ss_dssp             TSCEEEEEECCCC
T ss_pred             cCCCcEEEECCcc
Confidence            2468999999984

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=94.35  E-value=0.04  Score=44.61  Aligned_cols=93  Identities=17%  Similarity=0.113  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH----HhcCC-CEEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV----KSLGA-DEVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~----~~lg~-~~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      +++.+||=.| +|..|..+..+++..+.+|++++.+ +..+.+    +..+. ..++..+...   ........+|+|+-
T Consensus        54 ~~~~~vLDlG-~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~---~~~~~~~~fD~I~~  129 (230)
T 3evz_A           54 RGGEVALEIG-TGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGI---IKGVVEGTFDVIFS  129 (230)
T ss_dssp             CSSCEEEEEC-CTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCS---STTTCCSCEEEEEE
T ss_pred             CCCCEEEEcC-CCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchh---hhhcccCceeEEEE
Confidence            7889999998 5546777777777667899999844 433333    33443 2223222111   11112356999995


Q ss_pred             CCC--------------------------CCcccccccccCCCcEEEee
Q 020314          226 CVT--------------------------GIPWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       226 ~~g--------------------------~~~~~~~~~~l~~~G~~v~~  248 (327)
                      ...                          ...+..+.+.|+++|+++.+
T Consensus       130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            422                          01255666778888887764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=94.34  E-value=0.064  Score=44.59  Aligned_cols=35  Identities=20%  Similarity=0.127  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|.+.++.+...|++|++++++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   40 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWN   40 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECC
Confidence            56789999999999999999888899999998865

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=94.33  E-value=0.045  Score=47.76  Aligned_cols=47  Identities=15%  Similarity=0.091  Sum_probs=37.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD  199 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~  199 (327)
                      -+|++|+|.| .|.+|..+++.+...|++|++.+++ ++.+ +++.++++
T Consensus       171 L~GktV~V~G-~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEEC-chHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE
Confidence            3789999999 7999999999999999999866544 4443 55666654

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=94.32  E-value=0.048  Score=44.09  Aligned_cols=93  Identities=10%  Similarity=0.094  Sum_probs=59.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCC-CEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGA-DEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .++.+||-.|+  |.|..+..+++. |++|++++. +...+.+++... ..++..+-.  ..........||+|+.....
T Consensus        47 ~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~--~~~~~~~~~~fD~v~~~~~~  121 (226)
T 3m33_A           47 TPQTRVLEAGC--GHGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGK--GELPAGLGAPFGLIVSRRGP  121 (226)
T ss_dssp             CTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSC--SSCCTTCCCCEEEEEEESCC
T ss_pred             CCCCeEEEeCC--CCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchh--hccCCcCCCCEEEEEeCCCH
Confidence            57889999983  347777888877 789999984 455666654322 222222111  11111113579999987543


Q ss_pred             C-cccccccccCCCcEEEeec
Q 020314          230 I-PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       230 ~-~~~~~~~~l~~~G~~v~~g  249 (327)
                      . .+..+.+.|+|+|+++..+
T Consensus       122 ~~~l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          122 TSVILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             SGGGGGHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHHHHcCCCcEEEEeC
Confidence            3 3788889999999999554

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=94.32  E-value=0.02  Score=49.44  Aligned_cols=35  Identities=26%  Similarity=0.103  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-------CeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGN-------THVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g-------~~v~~~~~~  187 (327)
                      ++.+|||+||+|.+|..+++.+...|       .+|+++++.
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~   54 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF   54 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence            56689999999999999998888788       789888854

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.30  E-value=0.062  Score=50.47  Aligned_cols=75  Identities=17%  Similarity=0.149  Sum_probs=48.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc---HHHHHhcCCCEEEeCCCC-C--cc----cccCCCCCcccE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN---IELVKSLGADEVLDYKTP-D--GA----ALKSPSGRKYDA  222 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~---~~~~~~lg~~~v~~~~~~-~--~~----~~~~~~~~~~d~  222 (327)
                      .++.++|+||++++|.+.++.+...|++|++..+...   .+.++..|...+....+. .  .+    ..+..  +.+|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~--G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKY--GTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHH--SCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhc--CCCCE
Confidence            5788999999999999999999999999988764321   223344454333222222 1  11    11111  35999


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus       399 LVnNAGi  405 (604)
T 2et6_A          399 LVNNAGI  405 (604)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.28  E-value=0.056  Score=45.34  Aligned_cols=35  Identities=26%  Similarity=0.315  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRS   39 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            57789999999999999998888889999998865

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=94.25  E-value=0.077  Score=43.78  Aligned_cols=35  Identities=17%  Similarity=0.269  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|.+.++.+...|++|+.+.++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~   54 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRS   54 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57789999999999999999888899999998864

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=94.23  E-value=0.027  Score=46.60  Aligned_cols=76  Identities=18%  Similarity=0.184  Sum_probs=44.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHH-HHHhcCCCEE-E--eCCCCC--cccccCC--CCCcccE
Q 020314          154 QKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIE-LVKSLGADEV-L--DYKTPD--GAALKSP--SGRKYDA  222 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~-~~~~lg~~~v-~--~~~~~~--~~~~~~~--~~~~~d~  222 (327)
                      ++++||+||++++|.+.++.+...  |++|+.+.++ ++.+ ..+.++.... +  |-.+.+  ....+..  .-+++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            467999999999999888666554  4688877765 3433 3344443322 2  222211  1111100  1136899


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9999884

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=94.22  E-value=0.074  Score=45.87  Aligned_cols=88  Identities=16%  Similarity=0.126  Sum_probs=61.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      .+.+|.|+| .|.+|...++.++.+|.+|++.++. ++.+.+..+|....    + ..+..     ...|+|+.++....
T Consensus       154 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~----~-l~e~l-----~~aDvVi~~vp~~~  222 (330)
T 2gcg_A          154 TQSTVGIIG-LGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV----S-TPELA-----AQSDFIVVACSLTP  222 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC----C-HHHHH-----HHCSEEEECCCCCT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC----C-HHHHH-----hhCCEEEEeCCCCh
Confidence            678999999 7999999999999999999988854 45555555554321    1 11112     24799999987432


Q ss_pred             -----c-cccccccCCCcEEEeecCC
Q 020314          232 -----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                           + ...+..++++..++.++..
T Consensus       223 ~t~~~i~~~~~~~mk~gailIn~srg  248 (330)
T 2gcg_A          223 ATEGLCNKDFFQKMKETAVFINISRG  248 (330)
T ss_dssp             TTTTCBSHHHHHHSCTTCEEEECSCG
T ss_pred             HHHHhhCHHHHhcCCCCcEEEECCCC
Confidence                 2 2345678888888887654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=94.22  E-value=0.061  Score=44.19  Aligned_cols=35  Identities=20%  Similarity=0.292  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||+|++|.+.++.+...|++|+++++.
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   48 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG   48 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57889999999999999999888899999998864

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=94.22  E-value=0.25  Score=42.16  Aligned_cols=88  Identities=16%  Similarity=0.046  Sum_probs=61.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC-CcHHHHHhcCCC-EEEeCCCCCcc-cccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNT--HVTATCGA-RNIELVKSLGAD-EVLDYKTPDGA-ALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~-~~~~~~~~lg~~-~v~~~~~~~~~-~~~~~~~~~~d~v~d~~g~  229 (327)
                      .+|.|.| .|.+|.+.++.++..|.  +|++.+++ ++.+.+.++|.. ......   .+ ..     ...|+||-|+..
T Consensus        34 ~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~---~~~~~-----~~aDvVilavp~  104 (314)
T 3ggo_A           34 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI---AKVED-----FSPDFVMLSSPV  104 (314)
T ss_dssp             SEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCT---TGGGG-----GCCSEEEECSCG
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCH---HHHhh-----ccCCEEEEeCCH
Confidence            5799999 89999999999998898  88888755 567777777763 222111   11 11     358999999986


Q ss_pred             Ccc----cccccccCCCcEEEeecCC
Q 020314          230 IPW----STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       230 ~~~----~~~~~~l~~~G~~v~~g~~  251 (327)
                      ...    ......++++..+++++..
T Consensus       105 ~~~~~vl~~l~~~l~~~~iv~d~~Sv  130 (314)
T 3ggo_A          105 RTFREIAKKLSYILSEDATVTDQGSV  130 (314)
T ss_dssp             GGHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             HHHHHHHHHHhhccCCCcEEEECCCC
Confidence            543    3444567788888887754

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=94.22  E-value=0.08  Score=44.35  Aligned_cols=88  Identities=13%  Similarity=0.103  Sum_probs=57.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      ++.+++|.| +|++|.+++..+...|++|++..++ ++.+ +++.++.. +.  .+ ..+..     ..+|+|+.|++..
T Consensus       128 ~~~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~~--~~-~~~~~-----~~aDiVi~atp~~  197 (275)
T 2hk9_A          128 KEKSILVLG-AGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-VV--NS-PEEVI-----DKVQVIVNTTSVG  197 (275)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-EC--SC-GGGTG-----GGCSEEEECSSTT
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-ee--hh-HHhhh-----cCCCEEEEeCCCC
Confidence            567899999 7999999998888888877766654 3433 33455521 11  11 11111     3589999999865


Q ss_pred             ccc---cc--ccccCCCcEEEeecC
Q 020314          231 PWS---TF--EPNLGTTGKVIDFNP  250 (327)
Q Consensus       231 ~~~---~~--~~~l~~~G~~v~~g~  250 (327)
                      ...   ..  ...++++..++++..
T Consensus       198 ~~~~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          198 LKDEDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             SSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred             CCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            421   11  346777778888776

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=94.19  E-value=0.077  Score=43.02  Aligned_cols=74  Identities=12%  Similarity=0.157  Sum_probs=46.9

Q ss_pred             CCCeEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC---ccccc
Q 020314          153 QQKNILITAA----------------SGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD---GAALK  213 (327)
Q Consensus       153 ~~~~vlV~g~----------------~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~---~~~~~  213 (327)
                      .|.+|||+||                +|.+|.+.++.+...|++|+.+.++.........+. .+++.....   .....
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~-~~~~v~s~~em~~~v~~   80 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNL-SIREITNTKDLLIEMQE   80 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTE-EEEECCSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCe-EEEEHhHHHHHHHHHHH
Confidence            5788999999                788999999999999999999986543211000122 233333211   11111


Q ss_pred             CCCCCcccEEEeCCCC
Q 020314          214 SPSGRKYDAVINCVTG  229 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~  229 (327)
                      ..  +++|+++.+.+-
T Consensus        81 ~~--~~~Dili~aAAv   94 (232)
T 2gk4_A           81 RV--QDYQVLIHSMAV   94 (232)
T ss_dssp             HG--GGCSEEEECSBC
T ss_pred             hc--CCCCEEEEcCcc
Confidence            11  358999998873

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=94.17  E-value=0.25  Score=42.44  Aligned_cols=131  Identities=8%  Similarity=-0.053  Sum_probs=69.5

Q ss_pred             eEEEEcCCChHHHHH-HHHHHhCCCeEEEEecC--CcH-HHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          156 NILITAASGAVGLYA-VQLAKLGNTHVTATCGA--RNI-ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~-~~la~~~g~~v~~~~~~--~~~-~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      +|.|.| .|.+|... +..+...+.+++++++.  ++. +.++++|...+.  .+. .+.+.   ...+|+|+.++....
T Consensus         2 ~vgiiG-~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~~~-~~~l~---~~~~D~V~i~tp~~~   74 (332)
T 2glx_A            2 RWGLIG-ASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--TSV-EELVG---DPDVDAVYVSTTNEL   74 (332)
T ss_dssp             EEEEES-CCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--SCH-HHHHT---CTTCCEEEECSCGGG
T ss_pred             eEEEEc-ccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--CCH-HHHhc---CCCCCEEEEeCChhH
Confidence            588999 79999876 54433377888887743  333 345677754221  111 12222   235899999998665


Q ss_pred             -ccccccccCCCcEEEeecCC-c--hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCce
Q 020314          232 -WSTFEPNLGTTGKVIDFNPS-P--RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKL  294 (327)
Q Consensus       232 -~~~~~~~l~~~G~~v~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l  294 (327)
                       .+.+..+++.+ +-|.+.-+ .  ............-++..+...........++.+.+++++|.|
T Consensus        75 h~~~~~~al~~G-k~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           75 HREQTLAAIRAG-KHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             HHHHHHHHHHTT-CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTT
T ss_pred             hHHHHHHHHHCC-CeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCC
Confidence             56666677664 44444321 1  111111111111122222211112223457788888888875

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=94.15  E-value=0.066  Score=43.17  Aligned_cols=92  Identities=13%  Similarity=0.057  Sum_probs=57.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHHHH----hcC-----CCE--EEeCCCCCcccccCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIELVK----SLG-----ADE--VLDYKTPDGAALKSPSG  217 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~~~----~lg-----~~~--v~~~~~~~~~~~~~~~~  217 (327)
                      +++++||-.| +| .|..+..+++..|  .+|++++.+ ...+.++    ..+     .+.  ++..+.  ...  ....
T Consensus        76 ~~~~~vLDiG-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~~~--~~~~  149 (226)
T 1i1n_A           76 HEGAKALDVG-SG-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG--RMG--YAEE  149 (226)
T ss_dssp             CTTCEEEEET-CT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG--GGC--CGGG
T ss_pred             CCCCEEEEEc-CC-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc--ccC--cccC
Confidence            7889999998 44 4888888888765  589999843 4444332    322     121  221111  111  1113


Q ss_pred             CcccEEEeCCCCC-cccccccccCCCcEEEeec
Q 020314          218 RKYDAVINCVTGI-PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       218 ~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g  249 (327)
                      ..||+|+....-. .+..+.+.|+++|+++..-
T Consensus       150 ~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          150 APYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             CCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            4699998766543 3678889999999988653

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=94.15  E-value=0.059  Score=44.57  Aligned_cols=35  Identities=23%  Similarity=0.340  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+.+++.
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   47 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK   47 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            57899999999999999999888899999998865

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=94.12  E-value=0.058  Score=45.84  Aligned_cols=34  Identities=15%  Similarity=0.146  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ..+|||+||+|.+|...++.+...|.+|++++++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~   37 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRP   37 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECC
Confidence            3569999999999999999888889999998865

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=94.12  E-value=0.035  Score=47.15  Aligned_cols=72  Identities=17%  Similarity=0.052  Sum_probs=43.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIELVKSLGADEV-LDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .+|||+||+|.+|...++.+...  |.+|+++++. .+.+...  +...+ .|..+.+ .+.+.....++|+||++.+.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~-~~~~~~~~~~~d~vih~a~~   78 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN--SGPFEVVNALDFN-QIEHLVEVHKITDIYLMAAL   78 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH--SSCEEECCTTCHH-HHHHHHHHTTCCEEEECCCC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC--CCceEEecCCCHH-HHHHHHhhcCCCEEEECCcc
Confidence            46999999999999988777766  7899998854 3322222  22222 1222211 11111111268999999874

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=94.11  E-value=0.042  Score=48.00  Aligned_cols=33  Identities=24%  Similarity=0.219  Sum_probs=29.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRR   34 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECC
Confidence            579999999999999998888889999998864

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=94.07  E-value=0.088  Score=43.28  Aligned_cols=34  Identities=21%  Similarity=0.114  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      -+++++||+||++++|.+.++.+...|++|+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~   38 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHY   38 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence            3678999999999999999998888999998875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=94.06  E-value=0.058  Score=46.22  Aligned_cols=32  Identities=25%  Similarity=0.212  Sum_probs=28.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +|||+||+|.+|..+++.+...|.+|+++++.
T Consensus         3 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   34 (330)
T 2c20_A            3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNL   34 (330)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            69999999999999998888889999998854

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=94.04  E-value=0.026  Score=49.61  Aligned_cols=33  Identities=24%  Similarity=0.197  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~   61 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   61 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Confidence            579999999999999998888889999999854

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=94.03  E-value=0.071  Score=46.34  Aligned_cols=90  Identities=17%  Similarity=0.094  Sum_probs=62.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHH-hCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAK-LGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~-~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      -.|.+|.|+| .|.+|...++.++ .+|++|++..+. ++.+.+.++|...+   .+ ..+.+     ...|+|+.++..
T Consensus       161 l~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~---~~-l~ell-----~~aDvVil~vp~  230 (348)
T 2w2k_A          161 PRGHVLGAVG-LGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV---DS-LEELA-----RRSDCVSVSVPY  230 (348)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC---SS-HHHHH-----HHCSEEEECCCC
T ss_pred             CCCCEEEEEE-ECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe---CC-HHHHh-----ccCCEEEEeCCC
Confidence            3678999999 8999999999999 999999988854 45555555564321   11 11122     247999998874


Q ss_pred             Cc-cc-----ccccccCCCcEEEeecCC
Q 020314          230 IP-WS-----TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       230 ~~-~~-----~~~~~l~~~G~~v~~g~~  251 (327)
                      .. ..     ..+..++++..++.++..
T Consensus       231 ~~~t~~li~~~~l~~mk~gailin~srg  258 (348)
T 2w2k_A          231 MKLTHHLIDEAFFAAMKPGSRIVNTARG  258 (348)
T ss_dssp             SGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred             ChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence            32 22     345678888888887654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=94.00  E-value=0.052  Score=45.23  Aligned_cols=35  Identities=26%  Similarity=0.309  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++||+||++++|.+.++.+...|++|+.+++.
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~   61 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRA   61 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence            67899999999999999998888899999988754

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=94.00  E-value=0.05  Score=46.98  Aligned_cols=87  Identities=17%  Similarity=0.062  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-  230 (327)
                      -.|.+|.|.| .|.+|...++.++.+|++|++.++..+.+.+..+|...    .+. .+.+     ...|+|+.++... 
T Consensus       144 l~g~~vgIIG-~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~----~~l-~e~l-----~~aDiVil~vp~~~  212 (333)
T 2d0i_A          144 LYGKKVGILG-MGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKARY----MDI-DELL-----EKSDIVILALPLTR  212 (333)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEE----CCH-HHHH-----HHCSEEEECCCCCT
T ss_pred             CCcCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCcee----cCH-HHHH-----hhCCEEEEcCCCCh
Confidence            3678999999 89999999999999999999888654435455555321    111 1111     2468888888754 


Q ss_pred             c----cc-ccccccCCCcEEEeecC
Q 020314          231 P----WS-TFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       231 ~----~~-~~~~~l~~~G~~v~~g~  250 (327)
                      .    +. ..+..++++ .++.++.
T Consensus       213 ~t~~~i~~~~~~~mk~g-ilin~sr  236 (333)
T 2d0i_A          213 DTYHIINEERVKKLEGK-YLVNIGR  236 (333)
T ss_dssp             TTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred             HHHHHhCHHHHhhCCCC-EEEECCC
Confidence            2    22 235577887 7777663

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=94.00  E-value=0.63  Score=38.96  Aligned_cols=89  Identities=16%  Similarity=0.180  Sum_probs=56.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      -.+++++|.| +|++|.+++..+...|+ +|+++.++ ++.+ +++.+.   ...+++     +...   .+|+|+++++
T Consensus       120 ~~~k~vlvlG-aGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~~~~-----l~~l---~~DivInaTp  187 (282)
T 3fbt_A          120 IKNNICVVLG-SGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VISYDE-----LSNL---KGDVIINCTP  187 (282)
T ss_dssp             CTTSEEEEEC-SSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEEHHH-----HTTC---CCSEEEECSS
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cccHHH-----HHhc---cCCEEEECCc
Confidence            3688999999 69999999999999998 77777765 3332 223331   222211     1111   5899999996


Q ss_pred             CCc------ccccccccCCCcEEEeecCCc
Q 020314          229 GIP------WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       229 ~~~------~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      ...      .......++++..++++-..+
T Consensus       188 ~Gm~~~~~~~pi~~~~l~~~~~v~DlvY~P  217 (282)
T 3fbt_A          188 KGMYPKEGESPVDKEVVAKFSSAVDLIYNP  217 (282)
T ss_dssp             TTSTTSTTCCSSCHHHHTTCSEEEESCCSS
T ss_pred             cCccCCCccCCCCHHHcCCCCEEEEEeeCC
Confidence            321      122345677777778776443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=93.99  E-value=0.098  Score=45.13  Aligned_cols=35  Identities=29%  Similarity=0.304  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   60 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF   60 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56789999999999999998888889999999853

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=93.96  E-value=0.038  Score=43.85  Aligned_cols=69  Identities=22%  Similarity=0.260  Sum_probs=42.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHH-HHhcCCCEEEeCCCCCc----ccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIEL-VKSLGADEVLDYKTPDG----AALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~-~~~lg~~~v~~~~~~~~----~~~~~~~~~~~d~v~d~~g~  229 (327)
                      ++||+||+|++|...++.+...  +|++++++ ++.+. .+.++. ..+..+-.+.    ...+.  .+++|+++++.|.
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag~   76 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAVGK   76 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECCCc
Confidence            5999999999999888776655  88888765 33332 233332 2222221111    11111  1369999999884

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=93.94  E-value=0.061  Score=45.56  Aligned_cols=34  Identities=15%  Similarity=0.106  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ..+|+|+||+|.+|...++.+...|.+|++++++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~   37 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRE   37 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECC
Confidence            3569999999999999999888889999998864

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=93.89  E-value=0.089  Score=43.30  Aligned_cols=33  Identities=9%  Similarity=0.139  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++||+||+|++|.++++.+...|++|++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~   34 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIR   34 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            369999999999999999888899999998864

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=93.89  E-value=0.027  Score=49.05  Aligned_cols=33  Identities=18%  Similarity=0.245  Sum_probs=29.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC-----CeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGN-----THVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g-----~~v~~~~~~  187 (327)
                      .+|||+||+|.+|...++.+...|     .+|+++++.
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~   39 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARR   39 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCC
Confidence            479999999999999998888888     899999864

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=93.88  E-value=0.069  Score=46.02  Aligned_cols=88  Identities=8%  Similarity=0.022  Sum_probs=63.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-  230 (327)
                      .|.+|.|.| .|.+|...++.++.+|++|++..+.. +.+....+|...    .+ ..+..     ...|+|+-++... 
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~----~~-l~ell-----~~aDvV~l~~P~t~  212 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ----VA-CSELF-----ASSDFILLALPLNA  212 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE----CC-HHHHH-----HHCSEEEECCCCST
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee----CC-HHHHH-----hhCCEEEEcCCCCH
Confidence            688999999 89999999999999999999988653 566666666421    11 11122     2368999888732 


Q ss_pred             ----cc-cccccccCCCcEEEeecCC
Q 020314          231 ----PW-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ----~~-~~~~~~l~~~G~~v~~g~~  251 (327)
                          .+ ...+..|+++..+|.++..
T Consensus       213 ~t~~li~~~~l~~mk~gailIN~arg  238 (330)
T 4e5n_A          213 DTLHLVNAELLALVRPGALLVNPCRG  238 (330)
T ss_dssp             TTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             HHHHHhCHHHHhhCCCCcEEEECCCC
Confidence                12 2566789999999998754

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=93.87  E-value=0.034  Score=45.43  Aligned_cols=94  Identities=7%  Similarity=-0.055  Sum_probs=57.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhc----CCCE-EEeCCCCCcccccCCCCCcccEE-E
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSL----GADE-VLDYKTPDGAALKSPSGRKYDAV-I  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~~~~~~~d~v-~  224 (327)
                      .+|.+||-+| + |.|..+..+++..+.+++++. +++-.+.+++.    +... ++..+.  ...........||.| +
T Consensus        59 ~~G~rVLdiG-~-G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a--~~~~~~~~~~~FD~i~~  134 (236)
T 3orh_A           59 SKGGRVLEVG-F-GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLW--EDVAPTLPDGHFDGILY  134 (236)
T ss_dssp             TTCEEEEEEC-C-TTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCH--HHHGGGSCTTCEEEEEE
T ss_pred             cCCCeEEEEC-C-CccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehH--HhhcccccccCCceEEE
Confidence            5889999999 3 367888888887777888887 44445555432    2221 111110  112222344569887 4


Q ss_pred             eCCCCC-----------cccccccccCCCcEEEeec
Q 020314          225 NCVTGI-----------PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       225 d~~g~~-----------~~~~~~~~l~~~G~~v~~g  249 (327)
                      |+....           .+..+.++|+|+|+++.+.
T Consensus       135 D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             eeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            654321           1456778999999998764

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=93.85  E-value=0.11  Score=44.93  Aligned_cols=89  Identities=22%  Similarity=0.107  Sum_probs=61.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      -.+.+|.|.| .|.+|...++.++.+|.+|++..+..+.+.+..+|...    .+. .+..     ...|+|+.+++...
T Consensus       148 l~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~----~~l-~~~l-----~~aDvVil~vp~~~  216 (334)
T 2dbq_A          148 VYGKTIGIIG-LGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEF----KPL-EDLL-----RESDFVVLAVPLTR  216 (334)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEE----CCH-HHHH-----HHCSEEEECCCCCT
T ss_pred             CCCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEECCCcchhhHhhcCccc----CCH-HHHH-----hhCCEEEECCCCCh
Confidence            3678999999 89999999999999999999888654335555566421    111 1112     24799999887533


Q ss_pred             -cc-----ccccccCCCcEEEeecCC
Q 020314          232 -WS-----TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -~~-----~~~~~l~~~G~~v~~g~~  251 (327)
                       ..     ..+..++++..++.++..
T Consensus       217 ~t~~~i~~~~~~~mk~~ailIn~srg  242 (334)
T 2dbq_A          217 ETYHLINEERLKLMKKTAILINIARG  242 (334)
T ss_dssp             TTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             HHHHhhCHHHHhcCCCCcEEEECCCC
Confidence             22     345678888888888743

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=93.85  E-value=0.098  Score=42.27  Aligned_cols=84  Identities=21%  Similarity=0.217  Sum_probs=51.0

Q ss_pred             CCCeEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC---ccccc
Q 020314          153 QQKNILITAA----------------SGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD---GAALK  213 (327)
Q Consensus       153 ~~~~vlV~g~----------------~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~---~~~~~  213 (327)
                      .|++|||+||                +|++|.+.++.+...|++|+.+.++...+.  ..|. .+++.....   ....+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~--~~g~-~~~dv~~~~~~~~~v~~   83 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT--PPFV-KRVDVMTALEMEAAVNA   83 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--CTTE-EEEECCSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccccc--CCCC-eEEccCcHHHHHHHHHH
Confidence            6889999999                699999999999999999998875432211  1122 233333221   11111


Q ss_pred             CCCCCcccEEEeCCCCCc---ccccccccCC
Q 020314          214 SPSGRKYDAVINCVTGIP---WSTFEPNLGT  241 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~~---~~~~~~~l~~  241 (327)
                      ..  +.+|+++++.+-..   ....-..++.
T Consensus        84 ~~--~~~Dili~~Aav~d~~p~~~~~~KIkk  112 (226)
T 1u7z_A           84 SV--QQQNIFIGCAAVADYRAATVAPEKIKK  112 (226)
T ss_dssp             HG--GGCSEEEECCBCCSEEESSCCSSCC--
T ss_pred             hc--CCCCEEEECCcccCCCCccCChHHhcc
Confidence            11  35899999988432   3333445555

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=93.82  E-value=0.16  Score=44.15  Aligned_cols=34  Identities=26%  Similarity=0.370  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.+|||+||+|.+|...++.+...|.+|++++++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~   38 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHS   38 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence            4579999999999999998888889999998865

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=93.75  E-value=0.13  Score=44.20  Aligned_cols=72  Identities=17%  Similarity=0.221  Sum_probs=43.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC---C---CeEEEEecCC---cHHHHHhcC--CC-EEEeCCCCCcc-cccCCCCCcccE
Q 020314          156 NILITAASGAVGLYAVQLAKLG---N---THVTATCGAR---NIELVKSLG--AD-EVLDYKTPDGA-ALKSPSGRKYDA  222 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~---g---~~v~~~~~~~---~~~~~~~lg--~~-~v~~~~~~~~~-~~~~~~~~~~d~  222 (327)
                      +|||+||+|.+|..+++.+...   |   .+|+++++..   +.+.++.+.  .. ..+..+-.+.. +.+..  .++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~   79 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL--RGVDA   79 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT--TTCCE
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh--cCCCE
Confidence            5999999999999988777764   7   8999988532   222222221  11 12222111111 11111  46999


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ||++.+.
T Consensus        80 Vih~A~~   86 (337)
T 1r6d_A           80 IVHFAAE   86 (337)
T ss_dssp             EEECCSC
T ss_pred             EEECCCc
Confidence            9999984

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=93.70  E-value=0.078  Score=43.81  Aligned_cols=35  Identities=17%  Similarity=0.292  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++||+||+|++|.+.++.+...|++|+++++.
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~   47 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRS   47 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCc
Confidence            56789999999999999998888889999999863

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=93.69  E-value=0.085  Score=44.51  Aligned_cols=35  Identities=14%  Similarity=0.039  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~  187 (327)
                      +++++||+||++++|.+.++.+...|++|+.++ ++
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~   43 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS   43 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCC
Confidence            577899999999999999998888999999988 65

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=93.68  E-value=0.26  Score=36.96  Aligned_cols=96  Identities=11%  Similarity=0.136  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcHHHHH-h--cCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNIELVK-S--LGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~~~~~-~--lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .++++|.| .|.+|...++.+...|.+|+++++.  ++.+.+. .  .|.. ++..+..+...+...+-.++|.++-+++
T Consensus         3 ~~~vlI~G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            3 KDHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCe-EEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            45699999 6999999999999899999999864  3333332 2  2333 3333333322222222246899999998


Q ss_pred             CCccc----ccccccCCCcEEEeecCC
Q 020314          229 GIPWS----TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       229 ~~~~~----~~~~~l~~~G~~v~~g~~  251 (327)
                      ++..+    ...+.+.+..+++.....
T Consensus        81 ~d~~n~~~~~~a~~~~~~~~ii~~~~~  107 (153)
T 1id1_A           81 NDADNAFVVLSAKDMSSDVKTVLAVSD  107 (153)
T ss_dssp             CHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred             ChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence            75422    233445455566654443

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=93.67  E-value=0.19  Score=40.28  Aligned_cols=94  Identities=13%  Similarity=0.061  Sum_probs=59.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWS  233 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~  233 (327)
                      +|+|.| .|.+|...++.+...|.+|++++++ ++.+.+ +.++.. ++..+..+...++..+-..+|+++-+++.+...
T Consensus         2 ~iiIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n   79 (218)
T 3l4b_C            2 KVIIIG-GETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT-IIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN   79 (218)
T ss_dssp             CEEEEC-CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE-EEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH
Confidence            489999 6999999999999899999999855 555543 455654 343333333333322335689999999876522


Q ss_pred             ----ccccccCCCcEEEeecCC
Q 020314          234 ----TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       234 ----~~~~~l~~~G~~v~~g~~  251 (327)
                          ...+.+.+..+++.....
T Consensus        80 ~~~~~~a~~~~~~~~iia~~~~  101 (218)
T 3l4b_C           80 LFIAQLVMKDFGVKRVVSLVND  101 (218)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCS
T ss_pred             HHHHHHHHHHcCCCeEEEEEeC
Confidence                222333445566654433

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=93.65  E-value=0.13  Score=41.40  Aligned_cols=94  Identities=12%  Similarity=-0.005  Sum_probs=55.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHHH----HhcCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIELV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      +++++||-.| +| .|..+..+++..|  .+|++++.+ +..+.+    +......++..+-.+....... ...+|+|+
T Consensus        72 ~~~~~vLDlG-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~D~v~  148 (227)
T 1g8a_A           72 KPGKSVLYLG-IA-SGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRAL-VPKVDVIF  148 (227)
T ss_dssp             CTTCEEEEET-TT-STTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTT-CCCEEEEE
T ss_pred             CCCCEEEEEe-cc-CCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcc-cCCceEEE
Confidence            7888999998 34 3888888888764  689999844 333222    2221112222211111111111 24699999


Q ss_pred             eCCCCC----c-ccccccccCCCcEEEee
Q 020314          225 NCVTGI----P-WSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       225 d~~g~~----~-~~~~~~~l~~~G~~v~~  248 (327)
                      .....+    . +..+.+.|+++|+++..
T Consensus       149 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          149 EDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            665533    2 56677899999999876

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=93.62  E-value=0.15  Score=42.65  Aligned_cols=69  Identities=22%  Similarity=0.331  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEV-LDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +.+|||+| +|.+|..+++.+...|.+|+++++. ++.    ..+...+ .|..+.  ..+.....+.+|+||++.+.
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~--~~~~~~~~~~~d~vih~a~~   73 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----PAGVQTLIADVTRP--DTLASIVHLRPEILVYCVAA   73 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----CTTCCEEECCTTCG--GGCTTGGGGCCSEEEECHHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCceEEccCCCh--HHHHHhhcCCCCEEEEeCCC
Confidence            35699999 6999999999998889999999865 332    1222222 122221  11111111249999998863

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=93.60  E-value=0.31  Score=40.62  Aligned_cols=89  Identities=13%  Similarity=0.149  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH-HHHHhcCC--C-EEEeCCCCCcccccCCCCCcccEEEeCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI-ELVKSLGA--D-EVLDYKTPDGAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~-~~~~~lg~--~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~  227 (327)
                      ++++++|.| +|++|.+++..+...|.+|++..++ ++. ++++.++.  . .+.+.     +...  . ..+|++++++
T Consensus       118 ~~~~vlvlG-aGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~-----~~~~--~-~~~DivIn~t  188 (272)
T 1p77_A          118 PNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM-----DSIP--L-QTYDLVINAT  188 (272)
T ss_dssp             TTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG-----GGCC--C-SCCSEEEECC
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH-----HHhc--c-CCCCEEEECC
Confidence            678999999 5999999988888889888888765 443 34444432  1 12221     1111  1 3699999999


Q ss_pred             CCCcccc----cccccCCCcEEEeecC
Q 020314          228 TGIPWST----FEPNLGTTGKVIDFNP  250 (327)
Q Consensus       228 g~~~~~~----~~~~l~~~G~~v~~g~  250 (327)
                      +......    ....+.++..++++..
T Consensus       189 ~~~~~~~~~~i~~~~l~~~~~v~D~~y  215 (272)
T 1p77_A          189 SAGLSGGTASVDAEILKLGSAFYDMQY  215 (272)
T ss_dssp             CC-------CCCHHHHHHCSCEEESCC
T ss_pred             CCCCCCCCCCCCHHHcCCCCEEEEeeC
Confidence            8544211    1123344455555554

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=93.60  E-value=0.068  Score=45.00  Aligned_cols=36  Identities=11%  Similarity=0.060  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      +++++||+||++++|.+.++.+...|++|+.+++..
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~   57 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNS   57 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            577899999999999999988888899999988643

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=93.59  E-value=0.19  Score=44.22  Aligned_cols=32  Identities=19%  Similarity=0.177  Sum_probs=28.6

Q ss_pred             eEEEEcCCChHHHHHHHHHH-hCCCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAK-LGNTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~-~~g~~v~~~~~~  187 (327)
                      +|||+||+|.+|..+++.+. ..|++|+++++.
T Consensus         4 ~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~   36 (397)
T 1gy8_A            4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSL   36 (397)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHhCCCEEEEEecC
Confidence            79999999999999988887 889999998854

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=93.58  E-value=0.19  Score=43.74  Aligned_cols=132  Identities=18%  Similarity=0.183  Sum_probs=75.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC--CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          155 KNILITAASGAVGLYAVQLAKLG-NTHVTATCGA--RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~--~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      -+|.|+| .|.+|...+..++.. +++++++++.  ++.+.++.+|...   +.+. .+.+.   ...+|+|+.|+....
T Consensus         6 ~~vgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~~~~-~~ll~---~~~~D~V~i~tp~~~   77 (359)
T 3e18_A            6 YQLVIVG-YGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---YESY-EAVLA---DEKVDAVLIATPNDS   77 (359)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---CSCH-HHHHH---CTTCCEEEECSCGGG
T ss_pred             CcEEEEC-cCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---eCCH-HHHhc---CCCCCEEEEcCCcHH
Confidence            4689999 799999888777765 6789888743  4555566676531   1111 12222   245899999998765


Q ss_pred             -ccccccccCCCcEEEeecC---CchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          232 -WSTFEPNLGTTGKVIDFNP---SPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       232 -~~~~~~~l~~~G~~v~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                       .+.+..++..+-.++.=-+   .... .........-++..+.-.+.......++.+.+++++|.|.
T Consensus        78 h~~~~~~al~aGkhVl~EKP~a~~~~e-a~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG  144 (359)
T 3e18_A           78 HKELAISALEAGKHVVCEKPVTMTSED-LLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTIG  144 (359)
T ss_dssp             HHHHHHHHHHTTCEEEEESSCCSSHHH-HHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTTS
T ss_pred             HHHHHHHHHHCCCCEEeeCCCcCCHHH-HHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCCC
Confidence             7777777876544443222   2111 1111111122222222212222335677788888887753

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=93.57  E-value=0.062  Score=46.41  Aligned_cols=87  Identities=11%  Similarity=0.093  Sum_probs=59.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-  231 (327)
                      .|.+|.|+| .|.+|...++.++.+|++|++..+..+.. ++.+ ...    .....+..     ...|+|+.++.... 
T Consensus       145 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~~----~~~l~ell-----~~aDvV~l~~p~~~~  212 (333)
T 1j4a_A          145 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPE-LEKK-GYY----VDSLDDLY-----KQADVISLHVPDVPA  212 (333)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHT-TCB----CSCHHHHH-----HHCSEEEECSCCCGG
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcchh-HHhh-Cee----cCCHHHHH-----hhCCEEEEcCCCcHH
Confidence            678999999 89999999999999999999888654333 2332 221    11111122     24799999887432 


Q ss_pred             ----c-cccccccCCCcEEEeecCC
Q 020314          232 ----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 ----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                          + ...+..+++++.+|.++..
T Consensus       213 t~~li~~~~l~~mk~ga~lIn~arg  237 (333)
T 1j4a_A          213 NVHMINDESIAKMKQDVVIVNVSRG  237 (333)
T ss_dssp             GTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred             HHHHHhHHHHhhCCCCcEEEECCCC
Confidence                2 2355788999999998764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=93.54  E-value=0.035  Score=47.98  Aligned_cols=34  Identities=21%  Similarity=0.217  Sum_probs=28.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGN--THVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~  186 (327)
                      ++.+|||+||+|.+|..+++.+...|  .+|++.++
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~   58 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA   58 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence            56689999999999999998888878  57777764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=93.54  E-value=0.23  Score=41.55  Aligned_cols=90  Identities=13%  Similarity=0.009  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      .+++++|.| +|++|.+++..+...|+ +|+++.++ ++.+.+.. . .......+    ....  -..+|+||++++..
T Consensus       116 ~~k~vlvlG-aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~-~~~~~~~~----~~~~--~~~aDiVInaTp~G  186 (277)
T 3don_A          116 EDAYILILG-AGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-N-INKINLSH----AESH--LDEFDIIINTTPAG  186 (277)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-C-CEEECHHH----HHHT--GGGCSEEEECCC--
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-h-cccccHhh----HHHH--hcCCCEEEECccCC
Confidence            577899999 69999999999999998 78777755 33321111 0 01111110    1011  13589999998742


Q ss_pred             c---cc--ccccccCCCcEEEeecCC
Q 020314          231 P---WS--TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~---~~--~~~~~l~~~G~~v~~g~~  251 (327)
                      .   ..  .-...++++..++++...
T Consensus       187 m~~~~~~~l~~~~l~~~~~V~D~vY~  212 (277)
T 3don_A          187 MNGNTDSVISLNRLASHTLVSDIVYN  212 (277)
T ss_dssp             -----CCSSCCTTCCSSCEEEESCCS
T ss_pred             CCCCCcCCCCHHHcCCCCEEEEecCC
Confidence            1   11  124567777888887654

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=93.53  E-value=0.061  Score=45.89  Aligned_cols=92  Identities=14%  Similarity=0.068  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCC---EEEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGAD---EVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~---~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      +++++||-.|+  |.|..+..+++..|++|++++. ++..+.+    +..|..   .++..+-.+   .. ...+.||+|
T Consensus       116 ~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~-~~~~~fD~V  189 (312)
T 3vc1_A          116 GPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLD---TP-FDKGAVTAS  189 (312)
T ss_dssp             CTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS---CC-CCTTCEEEE
T ss_pred             CCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhc---CC-CCCCCEeEE
Confidence            78899999983  4588888888877899999984 4444433    334432   122111111   11 123579999


Q ss_pred             EeCCC----C--CcccccccccCCCcEEEeec
Q 020314          224 INCVT----G--IPWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       224 ~d~~g----~--~~~~~~~~~l~~~G~~v~~g  249 (327)
                      +..-.    +  ..+..+.+.|+|+|+++...
T Consensus       190 ~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~  221 (312)
T 3vc1_A          190 WNNESTMYVDLHDLFSEHSRFLKVGGRYVTIT  221 (312)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EECCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            86432    1  12667778999999998764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=93.52  E-value=0.092  Score=45.20  Aligned_cols=35  Identities=14%  Similarity=0.039  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~  187 (327)
                      +++++||+||++++|.++++.+...|++|+.++ ++
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~   80 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRS   80 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            567899999999999999999988999999988 65

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=93.51  E-value=0.13  Score=46.83  Aligned_cols=37  Identities=22%  Similarity=0.290  Sum_probs=31.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC---CCeEEEEecCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG---NTHVTATCGAR  188 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~---g~~v~~~~~~~  188 (327)
                      .++.+|||+||+|.+|..+++.+...   |.+|+++++..
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~  110 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAE  110 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCC
Confidence            57889999999999999888766655   88999999653

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=93.49  E-value=0.46  Score=39.60  Aligned_cols=88  Identities=11%  Similarity=0.078  Sum_probs=56.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-Cc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      ..+.+++|.| +|++|.+++..+...|+ ++++..++ +| .++++.++.+ . .. .     ..   -..+|+|+++++
T Consensus       117 ~~~~~vlvlG-aGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~-~~-~-----~~---~~~~DivInaTp  184 (271)
T 1npy_A          117 NKNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-Y-IN-S-----LE---NQQADILVNVTS  184 (271)
T ss_dssp             CTTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-E-ES-C-----CT---TCCCSEEEECSS
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-c-ch-h-----hh---cccCCEEEECCC
Confidence            3567899999 79999999988888998 77777765 44 3455666642 1 10 0     01   135899999998


Q ss_pred             CCccc--------ccccccCCCcEEEeecCC
Q 020314          229 GIPWS--------TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       229 ~~~~~--------~~~~~l~~~G~~v~~g~~  251 (327)
                      .....        .....+.++..++++-..
T Consensus       185 ~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY~  215 (271)
T 1npy_A          185 IGMKGGKEEMDLAFPKAFIDNASVAFDVVAM  215 (271)
T ss_dssp             TTCTTSTTTTSCSSCHHHHHHCSEEEECCCS
T ss_pred             CCccCccccCCCCCCHHHcCCCCEEEEeecC
Confidence            54421        112345566667776643

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=93.40  E-value=0.23  Score=40.38  Aligned_cols=94  Identities=11%  Similarity=-0.075  Sum_probs=57.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEec-CCcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCG-ARNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      ++|++||=.|+  +.|..+..+|+..|  .+|++++. ++..+.++    +.+--..+..+......... ....+|+||
T Consensus        76 kpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~-~~~~vDvVf  152 (233)
T 4df3_A           76 KEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRH-LVEGVDGLY  152 (233)
T ss_dssp             CTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTT-TCCCEEEEE
T ss_pred             CCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcccccc-ccceEEEEE
Confidence            99999999984  46888888998776  48999984 44444443    22211112222111111111 124589888


Q ss_pred             eCCCCC-----cccccccccCCCcEEEee
Q 020314          225 NCVTGI-----PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       225 d~~g~~-----~~~~~~~~l~~~G~~v~~  248 (327)
                      ....-+     .+..+.+.|+|+|+++..
T Consensus       153 ~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          153 ADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             ECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            655432     255666789999998764

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=93.37  E-value=0.029  Score=47.60  Aligned_cols=32  Identities=19%  Similarity=0.225  Sum_probs=28.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGN-THVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~  187 (327)
                      +|||+||+|.+|...++.+...| .+|+++.+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~   33 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL   33 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence            48999999999999998888889 799988864

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=93.34  E-value=0.049  Score=47.71  Aligned_cols=91  Identities=19%  Similarity=0.235  Sum_probs=55.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-c
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-W  232 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~  232 (327)
                      -+|+|.|+ |.+|..+++.+.. ...|.+.+.. ++.+.++.......+|..+.+ ++.+..  +++|+|++|++... .
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~-~l~~~~--~~~DvVi~~~p~~~~~   91 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFD-KLVEVM--KEFELVIGALPGFLGF   91 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHH-HHHHHH--TTCSEEEECCCGGGHH
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHH-HHHHHH--hCCCEEEEecCCcccc
Confidence            36999995 9999998887754 4577766644 555555544322223332221 111111  35899999998653 4


Q ss_pred             cccccccCCCcEEEeecC
Q 020314          233 STFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       233 ~~~~~~l~~~G~~v~~g~  250 (327)
                      ..+..|+..+-.++++..
T Consensus        92 ~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           92 KSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             HHHHHHHHHTCEEEECCC
T ss_pred             hHHHHHHhcCcceEeeec
Confidence            445556666667777653

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=93.33  E-value=0.13  Score=42.12  Aligned_cols=33  Identities=18%  Similarity=0.158  Sum_probs=29.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++|||+||+|++|..+++.+...|++|+++++.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~   34 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRG   34 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            369999999999999998888889999999864

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=93.32  E-value=0.43  Score=41.59  Aligned_cols=133  Identities=14%  Similarity=0.087  Sum_probs=72.6

Q ss_pred             CeEEEEcCCChHHHH-HHHHHHhC-CCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-
Q 020314          155 KNILITAASGAVGLY-AVQLAKLG-NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-  231 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~-~~~la~~~-g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-  231 (327)
                      -+|.|+| .|.+|.. .+..++.. +++++++++.......+.++...+..  +. .+.+   ....+|+|+.|+.... 
T Consensus         8 ~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~--~~-~~ll---~~~~~D~V~i~tp~~~H   80 (364)
T 3e82_A            8 INIALIG-YGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIA--SP-EAAV---QHPDVDLVVIASPNATH   80 (364)
T ss_dssp             EEEEEEC-CSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEES--CH-HHHH---TCTTCSEEEECSCGGGH
T ss_pred             ceEEEEC-CCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEEC--CH-HHHh---cCCCCCEEEEeCChHHH
Confidence            4699999 7999984 66666654 77998888543222224444333331  11 1122   2246999999998765 


Q ss_pred             ccccccccCCCcEEEeecCC-c--hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          232 WSTFEPNLGTTGKVIDFNPS-P--RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       232 ~~~~~~~l~~~G~~v~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      .+.+..++..+-. |.+.-+ .  ............-++..+.-.+.......++.+.+++++|.|.
T Consensus        81 ~~~~~~al~aGk~-Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG  146 (364)
T 3e82_A           81 APLARLALNAGKH-VVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVIEQGTLG  146 (364)
T ss_dssp             HHHHHHHHHTTCE-EEECSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHCCCc-EEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHHHcCCCc
Confidence            6777777776544 444422 1  1111111112222233332212222345677888888887753

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=93.31  E-value=0.24  Score=45.60  Aligned_cols=33  Identities=12%  Similarity=0.081  Sum_probs=28.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTH-VTAT  184 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~  184 (327)
                      +++.++||+||+|++|...++.+...|++ ++.+
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~  282 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLH  282 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEE
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEE
Confidence            67899999999999999988887777886 5555

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=93.30  E-value=0.57  Score=41.02  Aligned_cols=134  Identities=13%  Similarity=-0.026  Sum_probs=76.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHh--------CCCeEEEEecC--CcH-HHHHhcCCCEEEeCCCCCcccccCCCCCcccEE
Q 020314          155 KNILITAASGAVGLYAVQLAKL--------GNTHVTATCGA--RNI-ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~--------~g~~v~~~~~~--~~~-~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      =+|.|+| +|.+|...+...+.        -+++++++++.  ++. +.++++|...+...  . .+.++   ...+|+|
T Consensus        26 irvgiIG-~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d--~-~ell~---~~~iDaV   98 (393)
T 4fb5_A           26 LGIGLIG-TGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATAD--W-RALIA---DPEVDVV   98 (393)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESC--H-HHHHH---CTTCCEE
T ss_pred             ccEEEEc-CCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCC--H-HHHhc---CCCCcEE
Confidence            4799999 79999865544332        26789999843  444 46688888765421  1 12222   2459999


Q ss_pred             EeCCCCCc-ccccccccCCCcEEEeecCCc---hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE
Q 020314          224 INCVTGIP-WSTFEPNLGTTGKVIDFNPSP---RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT  296 (327)
Q Consensus       224 ~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~  296 (327)
                      +-|+.... .+.+..+|+. |+=|++.-+.   ............-+++.+.-.+.......++.+.+++++|.|..
T Consensus        99 ~IatP~~~H~~~a~~al~a-GkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~G~iG~  174 (393)
T 4fb5_A           99 SVTTPNQFHAEMAIAALEA-GKHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGDGVIGR  174 (393)
T ss_dssp             EECSCGGGHHHHHHHHHHT-TCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHTTTTCS
T ss_pred             EECCChHHHHHHHHHHHhc-CCeEEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHcCCCcc
Confidence            99998766 7777788876 4445554221   11111111222222222222122223356778888899887643

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=93.30  E-value=0.14  Score=39.58  Aligned_cols=94  Identities=20%  Similarity=0.143  Sum_probs=57.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH----hcCC-CEEEeCCCCC-cccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK----SLGA-DEVLDYKTPD-GAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~----~lg~-~~v~~~~~~~-~~~~~~~~~~~~d~v~  224 (327)
                      .++.+||-.| +|. |..+..+++.. .++++++. ++..+.++    ..+. +.+. ....+ ......  ...+|+|+
T Consensus        32 ~~~~~vldiG-~G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~-~~~~d~~~~~~~--~~~~D~v~  105 (192)
T 1l3i_A           32 GKNDVAVDVG-CGT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVT-LMEGDAPEALCK--IPDIDIAV  105 (192)
T ss_dssp             CTTCEEEEES-CTT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEE-EEESCHHHHHTT--SCCEEEEE
T ss_pred             CCCCEEEEEC-CCC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceE-EEecCHHHhccc--CCCCCEEE
Confidence            7889999998 444 88888888876 89999984 44444333    3443 2111 11111 111111  13699999


Q ss_pred             eCCCCC----cccccccccCCCcEEEeecCC
Q 020314          225 NCVTGI----PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       225 d~~g~~----~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ......    .+..+.+.|+++|+++.....
T Consensus       106 ~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~~  136 (192)
T 1l3i_A          106 VGGSGGELQEILRIIKDKLKPGGRIIVTAIL  136 (192)
T ss_dssp             ESCCTTCHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred             ECCchHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence            765422    256667789999999876543

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=93.30  E-value=0.26  Score=44.39  Aligned_cols=96  Identities=15%  Similarity=0.097  Sum_probs=55.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHHH----HhcCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIELV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      +++++||-.| +|+ |..+.++++.++  .++++++.+ .+.+.+    +.+|...+.-...+.........+..||.|+
T Consensus       258 ~~g~~VLDlg-aG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl  335 (450)
T 2yxl_A          258 KPGETVVDLA-AAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVL  335 (450)
T ss_dssp             CTTCEEEESS-CTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred             CCcCEEEEeC-CCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEE
Confidence            7889998887 343 666777777653  689999844 454433    4556643321111111111112224699998


Q ss_pred             e---CCCCC--------------------------cccccccccCCCcEEEeec
Q 020314          225 N---CVTGI--------------------------PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       225 d---~~g~~--------------------------~~~~~~~~l~~~G~~v~~g  249 (327)
                      -   |+|..                          .+..+.+.|+++|+++...
T Consensus       336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t  389 (450)
T 2yxl_A          336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT  389 (450)
T ss_dssp             EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            4   44421                          1456677899999988654

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=93.22  E-value=0.41  Score=39.85  Aligned_cols=33  Identities=24%  Similarity=0.296  Sum_probs=30.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      ++.+|||.| +|.+|...+..+...|++|++++.
T Consensus        12 ~~k~VLVVG-gG~va~rka~~Ll~~Ga~VtViap   44 (274)
T 1kyq_A           12 KDKRILLIG-GGEVGLTRLYKLMPTGCKLTLVSP   44 (274)
T ss_dssp             TTCEEEEEE-ESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhCCCEEEEEcC
Confidence            678999999 799999999999999999998874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=93.20  E-value=0.098  Score=43.44  Aligned_cols=34  Identities=21%  Similarity=0.112  Sum_probs=31.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +++++||+||+|++|...++.+...|++|+++++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r   53 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG   53 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            5778999999999999999988889999999886

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=93.20  E-value=0.081  Score=43.50  Aligned_cols=96  Identities=16%  Similarity=0.064  Sum_probs=58.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEec-CCcHHHH----HhcCCC-EEEeCCCCC-cccccC-CCCCccc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCG-ARNIELV----KSLGAD-EVLDYKTPD-GAALKS-PSGRKYD  221 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~-~~~~~~~----~~lg~~-~v~~~~~~~-~~~~~~-~~~~~~d  221 (327)
                      .++.+||-.|+  +.|..+..+++.+  +.+|++++. ++..+.+    +..|.. .+ .....+ .+.... .....||
T Consensus        62 ~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v-~~~~~d~~~~l~~~~~~~~fD  138 (248)
T 3tfw_A           62 TQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRV-TLREGPALQSLESLGECPAFD  138 (248)
T ss_dssp             HTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTE-EEEESCHHHHHHTCCSCCCCS
T ss_pred             cCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcE-EEEEcCHHHHHHhcCCCCCeE
Confidence            57889999983  3588888999976  469999984 4444433    344543 12 111111 111111 2234799


Q ss_pred             EEEeCCCCC----cccccccccCCCcEEEeecC
Q 020314          222 AVINCVTGI----PWSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       222 ~v~d~~g~~----~~~~~~~~l~~~G~~v~~g~  250 (327)
                      +|+-.....    .+..+.+.|+++|.++.-..
T Consensus       139 ~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~  171 (248)
T 3tfw_A          139 LIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV  171 (248)
T ss_dssp             EEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred             EEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence            998433321    26677889999998886443

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=93.18  E-value=0.79  Score=39.49  Aligned_cols=133  Identities=9%  Similarity=0.068  Sum_probs=73.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC--CcH-HHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLG-NTHVTATCGA--RNI-ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~--~~~-~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      -+|.|.| .|.+|...+..++.. +.+++++++.  ++. +.++.+|. .+.+  +. .+.+   ....+|+|+.|+...
T Consensus         5 ~rvgiiG-~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~-~~~~--~~-~~~l---~~~~~D~V~i~tp~~   76 (344)
T 3euw_A            5 LRIALFG-AGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGA-EAVA--SP-DEVF---ARDDIDGIVIGSPTS   76 (344)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTC-EEES--SH-HHHT---TCSCCCEEEECSCGG
T ss_pred             eEEEEEC-CcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCC-ceeC--CH-HHHh---cCCCCCEEEEeCCch
Confidence            3689999 799999887776655 6788887743  343 34567773 3321  11 1122   224689999999876


Q ss_pred             c-ccccccccCCCcEEEeecCCc--hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          231 P-WSTFEPNLGTTGKVIDFNPSP--RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       231 ~-~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      . ...+..++..+-.++.-.+..  ............-++..+.-.+.......++.+.+++++|.|.
T Consensus        77 ~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG  144 (344)
T 3euw_A           77 THVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEIG  144 (344)
T ss_dssp             GHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTTS
T ss_pred             hhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCCC
Confidence            5 666667776665444322211  1111111112222222222212222335677888889987753

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=93.15  E-value=0.098  Score=41.88  Aligned_cols=96  Identities=20%  Similarity=0.171  Sum_probs=58.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-  229 (327)
                      .++.+||-.|+  |.|..+..+++. |+++++++. +...+.+++.+.......+-.+........+..||+|+.+..- 
T Consensus        51 ~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~  127 (227)
T 3e8s_A           51 RQPERVLDLGC--GEGWLLRALADR-GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL  127 (227)
T ss_dssp             TCCSEEEEETC--TTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC
T ss_pred             CCCCEEEEeCC--CCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh
Confidence            56788999983  346777777776 889999984 4556666655433332221111100111233459999865331 


Q ss_pred             -----CcccccccccCCCcEEEeecC
Q 020314          230 -----IPWSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       230 -----~~~~~~~~~l~~~G~~v~~g~  250 (327)
                           ..+..+.+.|+++|+++....
T Consensus       128 ~~~~~~~l~~~~~~L~pgG~l~~~~~  153 (227)
T 3e8s_A          128 HQDIIELLSAMRTLLVPGGALVIQTL  153 (227)
T ss_dssp             SSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             hhhHHHHHHHHHHHhCCCeEEEEEec
Confidence                 126677789999999987654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=93.07  E-value=0.081  Score=45.54  Aligned_cols=32  Identities=16%  Similarity=0.061  Sum_probs=28.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLG-NTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~  187 (327)
                      +|||+||+|.+|..+++.+... |.+|+++++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~   34 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIG   34 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            5999999999999999888876 8899999865

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=93.00  E-value=0.19  Score=43.14  Aligned_cols=31  Identities=19%  Similarity=0.189  Sum_probs=27.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +|||+||+|.+|..+++.+...|.+|+++.+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~   32 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence            5899999999999999888888999998864

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=92.96  E-value=0.21  Score=41.72  Aligned_cols=88  Identities=15%  Similarity=0.057  Sum_probs=58.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCC-cccEEEeCCCCCc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNT--HVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGR-KYDAVINCVTGIP  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~-~~d~v~d~~g~~~  231 (327)
                      +|.|.| .|.+|.+.++.+...|.  +|++.++. ++.+.++++|...... .+. .+..     . ..|+|+.|+....
T Consensus         3 ~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~-~~~-~~~~-----~~~aDvVilavp~~~   74 (281)
T 2g5c_A            3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT-TSI-AKVE-----DFSPDFVMLSSPVRT   74 (281)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE-SCG-GGGG-----GTCCSEEEECSCHHH
T ss_pred             EEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc-CCH-HHHh-----cCCCCEEEEcCCHHH
Confidence            589999 89999999998888887  88887754 5666677777542111 111 1111     2 5899999998654


Q ss_pred             c----cccccccCCCcEEEeecCC
Q 020314          232 W----STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 ~----~~~~~~l~~~G~~v~~g~~  251 (327)
                      .    ......++++..+++++..
T Consensus        75 ~~~v~~~l~~~l~~~~iv~~~~~~   98 (281)
T 2g5c_A           75 FREIAKKLSYILSEDATVTDQGSV   98 (281)
T ss_dssp             HHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             HHHHHHHHHhhCCCCcEEEECCCC
Confidence            2    2333457777777776643

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=92.93  E-value=0.17  Score=48.32  Aligned_cols=35  Identities=17%  Similarity=0.143  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~   44 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNL   44 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECC
Confidence            56789999999999999998888889999998853

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=92.86  E-value=0.21  Score=41.05  Aligned_cols=90  Identities=14%  Similarity=0.114  Sum_probs=55.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH----hcCCCE--EEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK----SLGADE--VLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      +++.+||-.|+ | .|..+..+++.. .++++++. ++..+.++    ..+...  .+..+.   .... ...+.||+|+
T Consensus        36 ~~~~~vLDiGc-G-~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~---~~l~-~~~~~fD~V~  108 (260)
T 1vl5_A           36 KGNEEVLDVAT-G-GGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQMP-FTDERFHIVT  108 (260)
T ss_dssp             CSCCEEEEETC-T-TCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CCC-SCTTCEEEEE
T ss_pred             CCCCEEEEEeC-C-CCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH---HhCC-CCCCCEEEEE
Confidence            78899999983 4 677777777764 59999984 44444433    334322  111111   1111 2235799999


Q ss_pred             eCCCC-------CcccccccccCCCcEEEee
Q 020314          225 NCVTG-------IPWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       225 d~~g~-------~~~~~~~~~l~~~G~~v~~  248 (327)
                      .+..-       ..+..+.+.|+|+|+++..
T Consensus       109 ~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~  139 (260)
T 1vl5_A          109 CRIAAHHFPNPASFVSEAYRVLKKGGQLLLV  139 (260)
T ss_dssp             EESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EhhhhHhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence            76442       1266777899999999875

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=92.84  E-value=0.42  Score=41.31  Aligned_cols=132  Identities=13%  Similarity=0.024  Sum_probs=76.5

Q ss_pred             CeEEEEcCCChHHHH-HHHHHH-hCCCeEEEEecC--Cc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGLY-AVQLAK-LGNTHVTATCGA--RN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~-~~~la~-~~g~~v~~~~~~--~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      =++.|+| +|.+|.. .+...+ .-+++++++++.  ++ .+.++++|...++..-   .+.+.   ...+|+|+-|+..
T Consensus        24 irigiIG-~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~---~ell~---~~~iDaV~I~tP~   96 (350)
T 4had_A           24 LRFGIIS-TAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSY---EEMLA---SDVIDAVYIPLPT   96 (350)
T ss_dssp             EEEEEES-CCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSH---HHHHH---CSSCSEEEECSCG
T ss_pred             cEEEEEc-ChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCH---HHHhc---CCCCCEEEEeCCC
Confidence            3789999 7999974 355444 457899999853  33 4466888887664211   12222   2469999999987


Q ss_pred             Cc-ccccccccCCCcEEEeecCC----chhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          230 IP-WSTFEPNLGTTGKVIDFNPS----PRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       230 ~~-~~~~~~~l~~~G~~v~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      .. .+.+..+|..+ +=|++.-+    ...... ......-++..+.-.+.......++.+.+++++|.|.
T Consensus        97 ~~H~~~~~~al~aG-khVl~EKPla~~~~ea~~-l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~iG  165 (350)
T 4had_A           97 SQHIEWSIKAADAG-KHVVCEKPLALKAGDIDA-VIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAIG  165 (350)
T ss_dssp             GGHHHHHHHHHHTT-CEEEECSCCCSSGGGGHH-HHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTTS
T ss_pred             chhHHHHHHHHhcC-CEEEEeCCcccchhhHHH-HHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCCC
Confidence            65 77788888764 44555422    111111 1111122222222112222335677888889998763

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=92.82  E-value=0.17  Score=42.04  Aligned_cols=34  Identities=21%  Similarity=0.242  Sum_probs=30.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      .+++++||+||++++|.+.++.+...|++|+.+.
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~   57 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNY   57 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence            4677899999999999999999989999998774

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=92.81  E-value=0.054  Score=47.06  Aligned_cols=32  Identities=25%  Similarity=0.241  Sum_probs=26.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLG-NTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~  187 (327)
                      +|||+||+|.+|..+++.+... |.+|+++++.
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~   34 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKL   34 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecC
Confidence            4999999999999888777665 7899998853

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=92.80  E-value=0.15  Score=44.04  Aligned_cols=33  Identities=30%  Similarity=0.376  Sum_probs=28.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLG--NTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~  187 (327)
                      .+|||+||+|.+|...++.+...  |.+|+++++.
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~   39 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKL   39 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            47999999999999988777766  7899998864

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=92.79  E-value=0.22  Score=40.82  Aligned_cols=92  Identities=13%  Similarity=0.044  Sum_probs=58.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCC---EEEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGAD---EVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~---~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      +++.+||-.| +| .|..+..+++..+.++++++. +...+.+    ...|..   .++..+-.+   .. ...+.||+|
T Consensus        45 ~~~~~vLDiG-~G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~~-~~~~~fD~v  118 (257)
T 3f4k_A           45 TDDAKIADIG-CG-TGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN---LP-FQNEELDLI  118 (257)
T ss_dssp             CTTCEEEEET-CT-TSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS---CS-SCTTCEEEE
T ss_pred             CCCCeEEEeC-CC-CCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh---CC-CCCCCEEEE
Confidence            7888999998 33 588899999988789999984 4433333    344432   122111111   11 123579999


Q ss_pred             EeCCCCC------cccccccccCCCcEEEeec
Q 020314          224 INCVTGI------PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       224 ~d~~g~~------~~~~~~~~l~~~G~~v~~g  249 (327)
                      +....-.      .+..+.+.|+|+|+++...
T Consensus       119 ~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          119 WSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             EEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             EecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            8543211      2667778999999998654

>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A

Probab=92.79  E-value=0.58  Score=40.64  Aligned_cols=134  Identities=13%  Similarity=0.065  Sum_probs=74.1

Q ss_pred             CeEEEEcCCChHHHH-HHHHHHhC-CCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-
Q 020314          155 KNILITAASGAVGLY-AVQLAKLG-NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-  231 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~-~~~la~~~-g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-  231 (327)
                      -+|.|+| .|.+|.. .+..++.. +++++++++.......+.++...+..  +. .+.+   ....+|+|+.|+.... 
T Consensus         6 ~rvgiiG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~--~~-~~ll---~~~~vD~V~i~tp~~~H   78 (358)
T 3gdo_A            6 IKVGILG-YGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVH--EL-EEIT---NDPAIELVIVTTPSGLH   78 (358)
T ss_dssp             EEEEEEC-CSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEES--ST-HHHH---TCTTCCEEEECSCTTTH
T ss_pred             ceEEEEc-cCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceEC--CH-HHHh---cCCCCCEEEEcCCcHHH
Confidence            3689999 7999985 66666544 77999888553333455665444332  11 1222   2245999999998765 


Q ss_pred             ccccccccCCCcEEEeecCCc--hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          232 WSTFEPNLGTTGKVIDFNPSP--RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       232 ~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      .+.+..+++.+-.++.=-+..  ............-++..+.-.+.......++.+.+++++|.|.
T Consensus        79 ~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG  144 (358)
T 3gdo_A           79 YEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLISEGSLE  144 (358)
T ss_dssp             HHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHHHHTTSSC
T ss_pred             HHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHHHhcCCCC
Confidence            777777777765544322211  1111111111122223232212222335677888889988763

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=92.70  E-value=0.14  Score=43.50  Aligned_cols=33  Identities=15%  Similarity=0.247  Sum_probs=29.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +++|||+||+|.+|...++.+...|.+|+++.+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r   33 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIR   33 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEe
Confidence            467999999999999999988888999998875

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=92.64  E-value=0.03  Score=45.76  Aligned_cols=96  Identities=15%  Similarity=0.052  Sum_probs=58.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHHHH----HhcCCCEEEeCCCCC-ccccc-C--------
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIELV----KSLGADEVLDYKTPD-GAALK-S--------  214 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~~~----~~lg~~~v~~~~~~~-~~~~~-~--------  214 (327)
                      .++++||-.| +| .|..+..+++..  +.++++++.+ +..+.+    +..|...-+.....+ ..... .        
T Consensus        59 ~~~~~VLdiG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~  136 (239)
T 2hnk_A           59 SGAKRIIEIG-TF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS  136 (239)
T ss_dssp             HTCSEEEEEC-CT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred             hCcCEEEEEe-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence            5788999998 44 688899999987  5699999854 444333    334543211111111 11000 0        


Q ss_pred             ----CC-C-CcccEEEeCCCCC----cccccccccCCCcEEEeec
Q 020314          215 ----PS-G-RKYDAVINCVTGI----PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       215 ----~~-~-~~~d~v~d~~g~~----~~~~~~~~l~~~G~~v~~g  249 (327)
                          .. + ..||+|+.....+    .+..+.+.|+++|.++.-.
T Consensus       137 ~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          137 WASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             GGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                01 1 5699999776533    2567778999999998643

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=92.61  E-value=0.12  Score=44.72  Aligned_cols=87  Identities=15%  Similarity=0.056  Sum_probs=59.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC-
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI-  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-  230 (327)
                      .|.+|.|+| .|.+|...++.++.+|++|++..+. .+.+...  +...+   .+ ..+.+     ...|+|+-++... 
T Consensus       172 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~---~~-l~ell-----~~sDvV~l~~Plt~  239 (345)
T 4g2n_A          172 TGRRLGIFG-MGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYH---DT-LDSLL-----GASDIFLIAAPGRP  239 (345)
T ss_dssp             TTCEEEEES-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEEC---SS-HHHHH-----HTCSEEEECSCCCG
T ss_pred             CCCEEEEEE-eChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEe---CC-HHHHH-----hhCCEEEEecCCCH
Confidence            578999999 8999999999999999999998865 3333222  43221   11 11222     2368999888732 


Q ss_pred             c----c-cccccccCCCcEEEeecCC
Q 020314          231 P----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      .    + ...+..++++..+|.++..
T Consensus       240 ~T~~li~~~~l~~mk~gailIN~aRG  265 (345)
T 4g2n_A          240 ELKGFLDHDRIAKIPEGAVVINISRG  265 (345)
T ss_dssp             GGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred             HHHHHhCHHHHhhCCCCcEEEECCCC
Confidence            1    2 3456788999999988754

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=92.56  E-value=0.23  Score=45.44  Aligned_cols=37  Identities=22%  Similarity=0.248  Sum_probs=31.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      .+..+|||+||+|.+|..+++.+...|.+|+++++..
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~  184 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRAD  184 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESS
T ss_pred             CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCC
Confidence            3457899999999999999988877788999998653

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=92.53  E-value=0.083  Score=44.84  Aligned_cols=31  Identities=19%  Similarity=0.207  Sum_probs=28.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +|||+||+|.+|...++.+...|.+|+++++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r   32 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDN   32 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence            5999999999999999988888999998875

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=92.52  E-value=0.45  Score=41.25  Aligned_cols=133  Identities=9%  Similarity=-0.028  Sum_probs=75.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC--CcH-HHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLG-NTHVTATCGA--RNI-ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~--~~~-~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      -+|.|+| .|.+|...+..++.. +++++++++.  ++. +.++.+|...   +.+. .+.+.   ...+|+|+.|+...
T Consensus         6 ~~vgiiG-~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~~~-~~~l~---~~~~D~V~i~tp~~   77 (354)
T 3db2_A            6 VGVAAIG-LGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DATM-EALLA---REDVEMVIITVPND   77 (354)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CSSH-HHHHH---CSSCCEEEECSCTT
T ss_pred             ceEEEEc-cCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cCCH-HHHhc---CCCCCEEEEeCChH
Confidence            4699999 799999888777766 7788888743  343 3456677542   2111 12222   24589999999876


Q ss_pred             c-ccccccccCCCcEEEeecCCc--hhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          231 P-WSTFEPNLGTTGKVIDFNPSP--RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       231 ~-~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      . ...+..++..+-.++.--+..  ............-++..+.-.+.......++.+.+++++|.|.
T Consensus        78 ~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG  145 (354)
T 3db2_A           78 KHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEIG  145 (354)
T ss_dssp             SHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTTC
T ss_pred             HHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCCC
Confidence            6 667777777665544322211  1111111111122223232212223345678888899998874

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=92.51  E-value=0.69  Score=40.03  Aligned_cols=131  Identities=14%  Similarity=0.075  Sum_probs=73.3

Q ss_pred             CeEEEEcCCChHHH-HHHHHHHhC-CCeEEEEec-C-CcH-HHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGL-YAVQLAKLG-NTHVTATCG-A-RNI-ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~-~~~~la~~~-g~~v~~~~~-~-~~~-~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      -+|.|+| .|.+|. ..+..++.. +++++++++ . ++. +.++.+|....-++    .+.+.   ...+|+|+.|+..
T Consensus        28 ~rigiIG-~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~----~~ll~---~~~~D~V~i~tp~   99 (350)
T 3rc1_A           28 IRVGVIG-CADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGY----PALLE---RDDVDAVYVPLPA   99 (350)
T ss_dssp             EEEEEES-CCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESH----HHHHT---CTTCSEEEECCCG
T ss_pred             eEEEEEc-CcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCH----HHHhc---CCCCCEEEECCCc
Confidence            4689999 799998 556555554 778888874 3 333 35567776543111    12222   2458999999987


Q ss_pred             Cc-ccccccccCCCcEEEeecC----CchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCcee
Q 020314          230 IP-WSTFEPNLGTTGKVIDFNP----SPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       230 ~~-~~~~~~~l~~~G~~v~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      .. .+.+..++..+-.+ .+.-    .... .........-++..+.-.+.......++.+.+++++|.|.
T Consensus       100 ~~h~~~~~~al~aGk~V-l~EKP~a~~~~e-a~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG  168 (350)
T 3rc1_A          100 VLHAEWIDRALRAGKHV-LAEKPLTTDRPQ-AERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIG  168 (350)
T ss_dssp             GGHHHHHHHHHHTTCEE-EEESSSCSSHHH-HHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTTC
T ss_pred             HHHHHHHHHHHHCCCcE-EEeCCCCCCHHH-HHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCCC
Confidence            65 66777777666554 4432    2111 1111122222233332212222234567778888888763

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=92.51  E-value=0.11  Score=44.57  Aligned_cols=33  Identities=15%  Similarity=0.122  Sum_probs=27.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGN--THVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~  187 (327)
                      .+|||+||+|.+|..+++.+...|  .+|+++++.
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~   38 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL   38 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence            469999999999999887777665  799988853

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=92.49  E-value=0.68  Score=38.51  Aligned_cols=86  Identities=14%  Similarity=0.077  Sum_probs=57.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCC-EEEeCCCCCcccccCCCCCcccEEEeCCCCCc--
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGAD-EVLDYKTPDGAALKSPSGRKYDAVINCVTGIP--  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--  231 (327)
                      +|.|.| .|.+|.+.+..+...|.+|++.+++ ++.+.+.+.|.. .+..  +     ....  ...|+|+-|+....  
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~--~-----~~~~--~~~D~vi~av~~~~~~   71 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ--D-----LSLL--QTAKIIFLCTPIQLIL   71 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES--C-----GGGG--TTCSEEEECSCHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccC--C-----HHHh--CCCCEEEEECCHHHHH
Confidence            488999 8999999998888889898888754 555656666653 1111  1     1111  35899999998653  


Q ss_pred             --ccccccccCCCcEEEeecCC
Q 020314          232 --WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 --~~~~~~~l~~~G~~v~~g~~  251 (327)
                        +......++++..+++++..
T Consensus        72 ~~~~~l~~~~~~~~~vv~~~~~   93 (279)
T 2f1k_A           72 PTLEKLIPHLSPTAIVTDVASV   93 (279)
T ss_dssp             HHHHHHGGGSCTTCEEEECCSC
T ss_pred             HHHHHHHhhCCCCCEEEECCCC
Confidence              33344556677777777543

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=92.45  E-value=0.11  Score=42.77  Aligned_cols=93  Identities=9%  Similarity=-0.051  Sum_probs=53.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHH-hcCC--------------------CEEEeCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVK-SLGA--------------------DEVLDYKTPDG  209 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~-~lg~--------------------~~v~~~~~~~~  209 (327)
                      .++.+||..|+ | .|..+..+++. |++|++++ ++.-.+.++ ..+.                    ..+ .....+.
T Consensus        67 ~~~~~vLD~GC-G-~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~D~  142 (252)
T 2gb4_A           67 QSGLRVFFPLC-G-KAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSI-SLYCCSI  142 (252)
T ss_dssp             CCSCEEEETTC-T-TCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSE-EEEESCT
T ss_pred             CCCCeEEEeCC-C-CcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCce-EEEECcc
Confidence            57889999983 3 57777777775 88999998 445555553 2321                    001 0000011


Q ss_pred             ccccCCCCCcccEEEeCCCCC---------cccccccccCCCcEEEee
Q 020314          210 AALKSPSGRKYDAVINCVTGI---------PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       210 ~~~~~~~~~~~d~v~d~~g~~---------~~~~~~~~l~~~G~~v~~  248 (327)
                      ........+.||+|++...-.         .+..+.+.|+|+|+++.+
T Consensus       143 ~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          143 FDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             TTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            111111125799999754311         134566799999998644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	327
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	2e-17
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	2e-17
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	3e-17
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	3e-16
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	7e-16
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	1e-15
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	3e-14
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	7e-14
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	4e-13
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	2e-12
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	1e-11
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-11
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	2e-11
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	3e-11
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	9e-11
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	3e-10
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	4e-10
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	8e-10
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	1e-09
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	2e-09
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	3e-09
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	3e-09
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	1e-08
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	1e-08
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	3e-08
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	3e-08
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	5e-08
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	5e-08
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	1e-07
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-07
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	2e-07
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	2e-07
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	3e-07
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	4e-07
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	8e-07
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	8e-07
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-06
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	4e-06
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	8e-06
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	1e-05
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-05
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	2e-05
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	2e-05
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	5e-05
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	7e-05
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	2e-04
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	0.003

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 76.1 bits (186), Expect = 2e-17
 Identities = 27/147 (18%), Positives = 51/147 (34%), Gaps = 12/147 (8%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
             A   +             + +    + + L++V  +S+N  D           + + +
Sbjct: 4   FQAFVVNKTETEFT-AGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPD--GKIVKTY 60

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG------GGLAEFAVAKESLTVARPQE 120
           PF+P  D+AG V+        F+ GD+V+A          GG +E+A       V  P+ 
Sbjct: 61  PFVPGIDLAGVVVSSQ--HPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKG 118

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVK 147
           +       I  A L           ++
Sbjct: 119 LE-RIAQEISLAELPQALKRILRGELR 144

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 75.2 bits (184), Expect = 2e-17
 Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 16/136 (11%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A      GG    L+ V++P P   + E +L+VEA  +N  D  ++ G          
Sbjct: 1   MKAWVLKRLGGP---LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTR--LHP 55

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEG 126
           PFIP  +V                G +  A++  GGLAE     +   +  P+       
Sbjct: 56  PFIPGMEVV-----------GVVEGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGP 104

Query: 127 AGIPCAGLTAHQALTQ 142
                    A +AL  
Sbjct: 105 VFPFAEAEAAFRALLD 120

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 76.2 bits (186), Expect = 3e-17
 Identities = 39/193 (20%), Positives = 66/193 (34%), Gaps = 24/193 (12%)

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH 180
           ++  +GA I    LTA+  LT  + +       +   +    + AVG YA Q+ KL N +
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLT----PGKDWFIQNGGTSAVGKYASQIGKLLNFN 56

Query: 181 VTATCGARNIELVK-----SLGADEVLDYKTPD-------GAALKSPSGRKYDAVINCVT 228
             +    R            LGA +V+     +              SG +    +NCV 
Sbjct: 57  SISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG 116

Query: 229 GIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP--------KGE 280
           G   +     L   G ++ +       +T       F       F V+         K  
Sbjct: 117 GKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTS 176

Query: 281 NLDFLVKLVKEGK 293
            L+ ++   +EGK
Sbjct: 177 TLNQIIAWYEEGK 189

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 73.0 bits (178), Expect = 3e-16
 Identities = 34/169 (20%), Positives = 51/169 (30%), Gaps = 12/169 (7%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRK- 65
             A+Q +     V+ +    +      KD  L+KV  + IN  D    K           
Sbjct: 4   FQALQAEKNADDVS-VHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPL 62

Query: 66  -FPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAA 124
                 A  V        +E          + V   GGL+E+A       V  PQ +S  
Sbjct: 63  ILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLK 122

Query: 125 EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
           E        +   +          +  G  K+IL     G V    V+L
Sbjct: 123 EAMVDQLLTIVDREVS------LEETPGALKDILQNRIQGRV---IVKL 162

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 72.3 bits (176), Expect = 7e-16
 Identities = 27/162 (16%), Positives = 45/162 (27%), Gaps = 33/162 (20%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           + AV Y         L+  + P+P P +DE LL++    I   D    +         K 
Sbjct: 3   LSAVLY-----KQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKD 57

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLA---------------------- 104
           P +   + +G V+ +G  VK+ K GD+V                                
Sbjct: 58  PMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPP 117

Query: 105 ------EFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQAL 140
                  + V         P   +  +             A 
Sbjct: 118 DDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF 159

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 71.5 bits (174), Expect = 1e-15
 Identities = 34/169 (20%), Positives = 57/169 (33%), Gaps = 36/169 (21%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGM-----LRPF 61
           M AV+    G     L   E+ VP P   + L+KVEAA +   D  +++G      +   
Sbjct: 1   MRAVRLVEIGKP---LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVED 57

Query: 62  LPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKV--------------------------- 94
           L  K P     ++AG++  +G EV  +  GD V                           
Sbjct: 58  LGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW 117

Query: 95  VAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGL-TAHQALTQ 142
           + +   G  AE+ +      + + + V       +       A   L  
Sbjct: 118 LGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLEN 166

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 67.6 bits (164), Expect = 3e-14
 Identities = 36/162 (22%), Positives = 53/162 (32%), Gaps = 33/162 (20%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A    +YG     L+  EV VP P   + L+K+EA+ +   D    +G     +    
Sbjct: 6   MKAAVVHAYGAP---LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGD--WPVKPPL 60

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGG------------------------ 102
           PFIP  +  G V  +GS V   K GD+V                                
Sbjct: 61  PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYS 120

Query: 103 ----LAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQAL 140
                AE+ +A  +     P+ V A    G           +
Sbjct: 121 VNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM 162

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 65.7 bits (159), Expect = 7e-14
 Identities = 26/140 (18%), Positives = 41/140 (29%), Gaps = 11/140 (7%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           + A+  +   G         +      + +  + V  +S+N  D       +        
Sbjct: 1   LQALLLEQQDGKTL-ASVQTLDESRLPEGDVTVDVHWSSLNYKDAL----AITGKGKIIR 55

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSG------GGLAEFAVAKESLTVARPQE 120
            F     +        SE   F  G +V+    G      GGLAE A  K    VA PQ 
Sbjct: 56  NFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQG 115

Query: 121 VSAAEGAGIPCAGLTAHQAL 140
            +A E +             
Sbjct: 116 QAAKEISLSEAPNFAEAIIN 135

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 64.7 bits (156), Expect = 4e-13
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 16/183 (8%)

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH 180
           +S  + A     GLT +  L ++  +K     +Q   L  AA+G VGL A Q AK     
Sbjct: 1   ISFEQAAASFLKGLTVYYLLRKTYEIK---PDEQ--FLFHAAAGGVGLIACQWAKALGAK 55

Query: 181 VTATCGAR-NIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEP 237
           +  T G     +     GA +V++Y+  D      +   G+K   V + V    W     
Sbjct: 56  LIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLD 115

Query: 238 NLGTTGKVIDF------NPSPRVLLTFAWKKLTFSKKQLVPFSVSPK--GENLDFLVKLV 289
            L   G ++ F           + +      L  ++  L  +  + +   E  + L  L+
Sbjct: 116 CLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLI 175

Query: 290 KEG 292
             G
Sbjct: 176 ASG 178

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (152), Expect = 2e-12
 Identities = 35/176 (19%), Positives = 55/176 (31%), Gaps = 33/176 (18%)

Query: 2   AGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF 61
           A K    ++       G   L+    P+P P  +E LL++ +  I   D    +      
Sbjct: 3   AAKPNNLSLVVH----GPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGN 58

Query: 62  LPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVL----------------------- 98
              K P +   + +G V  +GS VK+ K GD+V                           
Sbjct: 59  FIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF 118

Query: 99  -----SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP-CAGLTAHQALTQSLGVKL 148
                  G L  F     +     P  V        P    L A +   + LG+K+
Sbjct: 119 CATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKALEAFETFKKGLGLKI 174

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (143), Expect = 1e-11
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 21/168 (12%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M AV+   +GG        ++ VP P   + L+KV A  +NP++  ++ G          
Sbjct: 3   MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGT--YSRKPLL 60

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQE-VSAAE 125
           P+ P SDVAG +  +G     FK GD+V    +  G           TV +  E +    
Sbjct: 61  PYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVI 120

Query: 126 GAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQL 173
           G+  P   +                       +I  + GA G   + L
Sbjct: 121 GSQYPLEKVAEAHEN-----------------IIHGS-GATGKMILLL 150

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 1e-11
 Identities = 24/167 (14%), Positives = 39/167 (23%), Gaps = 51/167 (30%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81
           L   E+ V  P   E  +K+ A ++   D     G          P I     AG V  +
Sbjct: 19  LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF---PVILGHLGAGIVESV 75

Query: 82  GSEVKNFKVGDKVVAVLSGG---------------------------------------- 101
           G  V   K GD V+ +                                            
Sbjct: 76  GEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKT 135

Query: 102 --------GLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQAL 140
                     +E+ V  +         +   E      +    ++A 
Sbjct: 136 ILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAF 182

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 57.3 bits (138), Expect = 2e-11
 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV 181
            A +   I  AG TA   +       +     +  I++T ASG VG  AV L       V
Sbjct: 2   DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGE--IVVTGASGGVGSTAVALLHKLGYQV 59

Query: 182 TATCG-ARNIELVKSLGA 198
            A  G     E +KSLGA
Sbjct: 60  VAVSGRESTHEYLKSLGA 77

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 59.0 bits (141), Expect = 3e-11
 Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 13/175 (7%)

Query: 7   MHAVQYDSYGG--GVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKG-------M 57
             AV Y  +G    V   +  E+       +E ++K   + +NP D    +G        
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 58  LRPFLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVAR 117
              F   +      ++   EVI +GS V + + GD V+      G               
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGND-DDFI 122

Query: 118 PQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ 172
                A   A     GLT  +++              +      A+   G   + 
Sbjct: 123 KLPNPAQSKANGKPNGLTDAKSIETLYDGTKPL---HELYQDGVANSKDGKQLIT 174

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.1 bits (139), Expect = 9e-11
 Identities = 37/190 (19%), Positives = 64/190 (33%), Gaps = 21/190 (11%)

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKL---G 177
           +S   GA I   GLT+   + +   +    +G  + ++++ A+GA G  A Q+  L    
Sbjct: 2   LSYFLGA-IGMPGLTSLIGVQEKGHIS---AGSNQTMVVSGAAGACGSLAGQIGHLLGCS 57

Query: 178 NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-------I 230
                     + + L   LG D  ++YKT + A     +      V     G       I
Sbjct: 58  RVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVI 117

Query: 231 PWSTFEPNLGTTGKVIDFNPS---PRVLLTFAWKKLTFSKKQLVPFSVSP----KGENLD 283
                  ++   G++  +N     P  L                 F+V          + 
Sbjct: 118 SQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGIL 177

Query: 284 FLVKLVKEGK 293
            L +  KEGK
Sbjct: 178 QLSQWFKEGK 187

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 56.2 bits (134), Expect = 3e-10
 Identities = 26/162 (16%), Positives = 50/162 (30%), Gaps = 31/162 (19%)

Query: 9   AVQYDSYGGGVAGLKHVEVPVPT-PNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFP 67
           A +   Y      L+  +V  P    + + ++++  A +   D  L +GM    L  K P
Sbjct: 2   AARLHEYNKP---LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLP 58

Query: 68  FIPASDVAGEVIGLGSEVKNFKVGDKVV---------------------------AVLSG 100
           +    +  G +  +   V+  + GD V+                            +   
Sbjct: 59  YTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNID 118

Query: 101 GGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQ 142
           GG AEF        +  P++V                + L +
Sbjct: 119 GGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEK 160

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 56.2 bits (134), Expect = 4e-10
 Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 16/184 (8%)

Query: 125 EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTAT 184
           E A    A LTA  +L +   +     G+   +LI +A+G VG+ AV +AK+    +  T
Sbjct: 2   EAATFGVAYLTAWHSLCEVGRLS---PGE--RVLIHSATGGVGMAAVSIAKMIGARIYTT 56

Query: 185 CG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT 241
            G     E++  LG + V D ++ D     L+   G   D V+N + G         L  
Sbjct: 57  AGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAP 116

Query: 242 TGKVI-----DFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPK---GENLDFLVKLVKEGK 293
            G+ I     D      + L    K  +FS   L            + L  +++ V +GK
Sbjct: 117 GGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGK 176

Query: 294 LKTV 297
           L+ +
Sbjct: 177 LEVL 180

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 54.9 bits (131), Expect = 8e-10
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLA-KLGNTH 180
           +  E   I  AG TA  ++ +     L        +L+T A+G VG  AV +  K G T 
Sbjct: 2   TLKEAMAIGTAGFTAALSIHRLEEHGLTPERG--PVLVTGATGGVGSLAVSMLAKRGYTV 59

Query: 181 VTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW 232
             +T  A   + ++ LGA EVL  +      ++    +++ A ++ V G   
Sbjct: 60  EASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTL 111

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 54.9 bits (131), Expect = 1e-09
 Identities = 24/195 (12%), Positives = 44/195 (22%), Gaps = 55/195 (28%)

Query: 2   AGKAV-MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
            GK +   A            L   E+ V  P+ +E  +K+ A  +   D          
Sbjct: 3   VGKVIKCKAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK 59

Query: 61  FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVAV----------------------- 97
                      + +   V   G  V  F+ G+KV+ +                       
Sbjct: 60  DGFPVVLGHEGAGIVESV---GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGW 116

Query: 98  -------------------------LSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCA 132
                                    L     +++ V  +         V   E       
Sbjct: 117 ANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMP 176

Query: 133 GLTAHQALTQSLGVK 147
             + + A+      K
Sbjct: 177 LESVNDAIDLMKHGK 191

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 54.1 bits (129), Expect = 2e-09
 Identities = 39/181 (21%), Positives = 62/181 (34%), Gaps = 14/181 (7%)

Query: 122 SAAEGAGIPCAGLTAHQAL--TQSLGVKLDGSGQQKNILITAASGAVGLYAVQLA-KLGN 178
            A +   I  AG TA   +   +  GV+         I++T ASG VG  AV L  KLG 
Sbjct: 2   DARKAMIIGTAGFTAMLCVMALEDAGVRPQD----GEIVVTGASGGVGSTAVALLHKLGY 57

Query: 179 THVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPN 238
             V  +      E +KSLGA  VL       +  +    + +   I+ V     +     
Sbjct: 58  QVVAVSGRESTHEYLKSLGASRVLPRDEFAES--RPLEKQVWAGAIDTVGDKVLAKVLAQ 115

Query: 239 LGTTGKVIDFNPSP-----RVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK 293
           +   G V     +        ++ F  + +       V      + +    LV  + E  
Sbjct: 116 MNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESF 175

Query: 294 L 294
            
Sbjct: 176 Y 176

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 53.7 bits (128), Expect = 3e-09
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 8/95 (8%)

Query: 2  AGKAV-MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
          AGK +   A            L    + V  P   E  +K+ A+ I   D      +L+ 
Sbjct: 3  AGKDITCKAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSS----VLKE 55

Query: 61 FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVV 95
           +P KFP I   +  G V  +G+ V   K GDKV+
Sbjct: 56 IIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVI 90

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 52.7 bits (125), Expect = 3e-09
 Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 5/138 (3%)

Query: 8   HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFP 67
             +++  +GG    L+ VE     P ++E  ++ +A  IN ID  ++ G+  P       
Sbjct: 2   TRIEFHKHGG-PEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGL 60

Query: 68  FIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEV--SAAE 125
              A+ +  +V               V A  + G  +             P  +    AE
Sbjct: 61  GTEAAGIVSKVG--SGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAE 118

Query: 126 GAGIPCAGLTAHQALTQS 143
               P         + +S
Sbjct: 119 QQKYPLKDAQRAHEILES 136

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 51.5 bits (122), Expect = 1e-08
 Identities = 35/163 (21%), Positives = 50/163 (30%), Gaps = 34/163 (20%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           M A   + +      LK  EV  PT +  E L++++A  +   D     G        K 
Sbjct: 1   MKAAVVEQFKEP---LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVK--PKL 55

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVA----------------------------VL 98
           P IP  +  G V  +G  V + KVGD+V                                
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115

Query: 99  SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALT 141
             GG AE+  A     V  P      E   +        + L 
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNTI-IEVQPLEKINEVFDRMLK 157

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 52.2 bits (124), Expect = 1e-08
 Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 8/96 (8%)

Query: 2  AGKAV-MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
           GK +   A      G     L   E+ V  P   E  ++V A  + P D        + 
Sbjct: 3  QGKVIKCKAAIAWKTGSP---LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA 59

Query: 61 FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVA 96
               FP +   + AG V  +G  V NFK GDKV+ 
Sbjct: 60 L----FPVVLGHECAGIVESVGPGVTNFKPGDKVIP 91

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 50.8 bits (120), Expect = 3e-08
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 20/186 (10%)

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH 180
           +S A G  I   GLTA+  L +  GVK    G+   +L++AA+GAVG    Q+AKL    
Sbjct: 3   LSLALGT-IGMPGLTAYFGLLEVCGVK---GGE--TVLVSAAAGAVGSVVGQIAKLKGCK 56

Query: 181 VTATCG-ARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEP 237
           V    G    I  +K +G D   +YKT +    ALK  S   YD   + V G   +T   
Sbjct: 57  VVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLS 116

Query: 238 NL------GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP-----KGENLDFLV 286
            +         G +  +N   ++    + + + + + ++  F V       + + L  L+
Sbjct: 117 QMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLM 176

Query: 287 KLVKEG 292
           K V EG
Sbjct: 177 KWVLEG 182

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 50.3 bits (119), Expect = 3e-08
 Identities = 42/180 (23%), Positives = 62/180 (34%), Gaps = 13/180 (7%)

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN-- 178
           V       + C   T   A   +L V    S      +   A GAVGL A+  AK+    
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASS-----FVTWGA-GAVGLSALLAAKVCGAS 54

Query: 179 THVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCV-TGIPWSTFE 236
             +        +EL K LGA  V++ KT D  AA+K  +    +  +    +        
Sbjct: 55  IIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGV 114

Query: 237 PNLGTTGKVIDFN-PSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF--LVKLVKEGK 293
             LG  GK+     P       F    L    K ++               LV+L ++GK
Sbjct: 115 DALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 50.0 bits (118), Expect = 5e-08
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 9/108 (8%)

Query: 131 CAGLTAHQALTQSLGVKLDGSGQQK---NILITAASGAVGLYAVQLA-KLGNTHVTATCG 186
            AG TA  ++      +L+ +G      ++L+T A+G VG  AV +  K G   V +T  
Sbjct: 3   TAGFTAALSVH-----RLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGN 57

Query: 187 ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWST 234
               + +K LGA EV+  +      LK+ S +++   ++ V G   ++
Sbjct: 58  REAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLAS 105

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 49.9 bits (118), Expect = 5e-08
 Identities = 25/197 (12%), Positives = 49/197 (24%), Gaps = 26/197 (13%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           + A      G      +   + +  P  DE L+KV A  +   D  ++       LP   
Sbjct: 4   IIAAVTPCKGAD---FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVL 60

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVAVLSGGGLAEFAVAKESL------------- 113
               +      +  +G  V   +VGD VV      G                        
Sbjct: 61  GHEGSG----IIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGA 116

Query: 114 -----TVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGL 168
                      +           +    +    ++  VK+        ++   A   +  
Sbjct: 117 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQ 176

Query: 169 YAVQLAK-LGNTHVTAT 184
            A+   K +    +   
Sbjct: 177 AAIDSRKGITLKPIIKI 193

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 48.8 bits (115), Expect = 1e-07
 Identities = 19/177 (10%), Positives = 37/177 (20%), Gaps = 13/177 (7%)

Query: 125 EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTAT 184
           +   I C   T + +  +   V            +    G      +     G   +   
Sbjct: 5   KVCLIGCGFSTGYGSAVKVAKVTQG-----STCAVFGLGGVGLSVIMGCKAAGAARIIGV 59

Query: 185 CGARN-IELVKSLGADEVLDYKTPDGAA-----LKSPSGRKYDAVINCVTGIPWSTFEPN 238
              ++     K +GA E ++ +             S  G  +   +        +     
Sbjct: 60  DINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCC 119

Query: 239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF--LVKLVKEGK 293
               G  +     P          L  S +                  LV      K
Sbjct: 120 QEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 48.4 bits (114), Expect = 1e-07
 Identities = 17/177 (9%), Positives = 39/177 (22%), Gaps = 13/177 (7%)

Query: 125 EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTAT 184
           +   + C   T + A   +  ++           +    G      +     G + +   
Sbjct: 5   KVCLLGCGISTGYGAAVNTAKLEPGSV-----CAVFGLGGVGLAVIMGCKVAGASRIIGV 59

Query: 185 CG-ARNIELVKSLGADEVLDYKTPDGAA---LKSPSGRKYDAVINCVTGIP--WSTFEPN 238
                     K  GA E ++ +         L   +    D    C+  +    +  E  
Sbjct: 60  DINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEAC 119

Query: 239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF--LVKLVKEGK 293
               G  +    +              + +     +            LV      K
Sbjct: 120 HKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 48.7 bits (115), Expect = 2e-07
 Identities = 26/96 (27%), Positives = 34/96 (35%), Gaps = 8/96 (8%)

Query: 2  AGKAV-MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
          AGK +   A                EV V  P   E  +K+ A  I   D  +  G    
Sbjct: 3  AGKVIKCKAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGT--- 56

Query: 61 FLPRKFPFIPASDVAGEVIGLGSEVKNFKVGDKVVA 96
           L    P I   + AG V  +G  V   + GDKV+ 
Sbjct: 57 -LVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIP 91

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.1 bits (113), Expect = 2e-07
 Identities = 33/176 (18%), Positives = 55/176 (31%), Gaps = 9/176 (5%)

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAK-LGNT 179
           + +   A + C GLT +  L ++ G         K + I    G +G     ++K +G  
Sbjct: 1   IPSHLAAPLLCGGLTVYSPLVRN-GCGPG-----KKVGIVGL-GGIGSMGTLISKAMGAE 53

Query: 180 HVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNL 239
               +  +R  E    +GAD  +          K         V             P  
Sbjct: 54  TYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKA 113

Query: 240 GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLK 295
              G  I     P      + K        +   ++    E L+ L+KLV E  +K
Sbjct: 114 MKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKE-LNQLLKLVSEKDIK 168

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 47.3 bits (111), Expect = 3e-07
 Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 11/175 (6%)

Query: 120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT 179
           +   A  A + CAG+T +  L          +G  K + +    G   +       +G  
Sbjct: 3   QEQLAAVAPLLCAGITTYSPLRHW------QAGPGKKVGVVGIGGLGHMGIKLAHAMGAH 56

Query: 180 HVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCV-TGIPWSTFEPN 238
            V  T      E  K+LGADEV++ +  D  A      + +D ++N V        F   
Sbjct: 57  VVAFTTSEAKREAAKALGADEVVNSRNADEMAAH---LKSFDFILNTVAAPHNLDDFTTL 113

Query: 239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK 293
           L   G +           +     L   ++ +    +    E  + ++    E  
Sbjct: 114 LKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQE-MLDFCAEHG 167

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 47.3 bits (111), Expect = 4e-07
 Identities = 22/177 (12%), Positives = 52/177 (29%), Gaps = 43/177 (24%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
           + AV    Y      L+ +++    P  ++  +++    +   D    +     +    +
Sbjct: 1   IKAVGA--YSAK-QPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSE---WAGTVY 54

Query: 67  PFIPASDVAGEVIGLGSEVKNFKVGDKVVA------------------------------ 96
           P +P  ++ G V+ +G +V+ +  GD V                                
Sbjct: 55  PCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNS 114

Query: 97  ------VLSGGGLAEFAVAKESLTVARP-QEVSAAEGAGIPCAGLTAHQALTQSLGV 146
                   + GG ++  V  E   +     ++       I  A     +   +   V
Sbjct: 115 PTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVKYRFV 171

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 46.8 bits (110), Expect = 8e-07
 Identities = 23/187 (12%), Positives = 44/187 (23%), Gaps = 46/187 (24%)

Query: 25  VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVI----- 79
           ++ P     +   +LKV + +I   D  + +G     +          +V  +       
Sbjct: 23  MQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITGEVIEKGRDVENL 82

Query: 80  -------------------------GLGSEVKNFKVGDKVVAVLSGG---GLAEFAV--A 109
                                    G+   V   + G     V  G    G AE+ +   
Sbjct: 83  QIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPY 142

Query: 110 KESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLY 169
            +   +  P    A E   I         +L                      +G    +
Sbjct: 143 ADFNLLKLPDRDKAMEKINIAEVVGVQVISLDD-APRGYGEFD----------AGVPKKF 191

Query: 170 AVQLAKL 176
            +   K 
Sbjct: 192 VIDPHKT 198

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.4 bits (109), Expect = 8e-07
 Identities = 25/170 (14%), Positives = 45/170 (26%), Gaps = 40/170 (23%)

Query: 7   MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
              +   S+       K  +         +  +K+EA  +   D     G        K 
Sbjct: 7   FEGIAIQSHEDWK-NPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM---KM 62

Query: 67  PFIPASDVAGEVIGLGSE-VKNFKVGDKVVA----------------------------- 96
           P +   ++ G+V+ LG +     KVG +V                               
Sbjct: 63  PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS 122

Query: 97  ------VLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQAL 140
                  +S GG A +    E   V  P+ +              A + +
Sbjct: 123 QPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERM 172

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 45.6 bits (107), Expect = 1e-06
 Identities = 31/179 (17%), Positives = 48/179 (26%), Gaps = 12/179 (6%)

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV 181
           +  E   I C   T + A   +  V            +    G      V     G + +
Sbjct: 1   APLESCLIGCGFATGYGAAVNTAKVTPG-----STCAVFGLGGVGFSAIVGCKAAGASRI 55

Query: 182 TATCG-ARNIELVKSLGADEVLDYKTPDGAA---LKSPSGRKYDAVINCVTGIPW--STF 235
                          LGA E L+ K  D      +   +    D  + C   I    +  
Sbjct: 56  IGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNAL 115

Query: 236 EPNLGTTG-KVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK 293
           +     +G  V+    SP   L      L   +          KGE +  LV    + K
Sbjct: 116 QSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKK 174

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 44.3 bits (103), Expect = 4e-06
 Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 7/174 (4%)

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV 181
           +A E A + C+G+T ++A+ ++  +      +   ++            +  A  G T +
Sbjct: 2   NAVEAAPLTCSGITTYRAVRKA-SLD---PTKTLLVVGAGGGLGTMAVQIAKAVSGATII 57

Query: 182 TATCGARNIELVKSLGADEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNL 239
                   +E  K  GAD V++    D      +    +  DAVI+        +  P  
Sbjct: 58  GVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKA 117

Query: 240 GTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK 293
                           L +    +T S+ Q V   V  + +    +++L + GK
Sbjct: 118 LAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSD-FLGIMRLAEAGK 170

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 43.5 bits (101), Expect = 8e-06
 Identities = 19/176 (10%), Positives = 38/176 (21%), Gaps = 12/176 (6%)

Query: 125 EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTAT 184
               + C   T   A   +  V+    G      +           +     G   + A 
Sbjct: 5   TVCLLGCGVSTGFGAAVNTAKVE---PGS--TCAVFGLGAVGLAAVMGCHSAGAKRIIAV 59

Query: 185 CGARN-IELVKSLGADEVLDYKTPDG---AALKSPSGRKYDAVINCVTGIPWSTFEPNLG 240
               +  E  K  GA + ++           L   +    D  + CV  +          
Sbjct: 60  DLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESC 119

Query: 241 TTGKVIDFN-PSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDF--LVKLVKEGK 293
             G  +        +           + +                  +VK   + K
Sbjct: 120 LKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 7  MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKF 66
          M              L  +E   P     +A+++  A S    D           L  + 
Sbjct: 1  MKGFAMLGINK----LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEG---ALGDRK 53

Query: 67 PFIPASDVAGEVIGLGSEVKNFKVGDKVVA 96
            I   +  GEV+ +GSEVK+FK GD+V+ 
Sbjct: 54 NMILGHEAVGEVVEVGSEVKDFKPGDRVIV 83

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 42.6 bits (99), Expect = 1e-05
 Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 22/181 (12%)

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ--LAKLGNT 179
              E A +  AG+TA++A+ ++      G+      +     G +G  AVQ        T
Sbjct: 5   KLVEMAPLADAGITAYRAVKKAARTLYPGA-----YVAIVGVGGLGHIAVQLLKVMTPAT 59

Query: 180 HVTATCGARNIELVKSLGADEVLDYKTPDGA-ALKSPSGRKYDAVINCVTGIPWSTFEPN 238
            +        ++L + LGAD V+D +       ++   GR  +  ++ V       + P 
Sbjct: 60  VIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPY 119

Query: 239 LGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKG------ENLDFLVKLVKEG 292
           L             R+++     +L F   +++   VS +G        L  LV L  +G
Sbjct: 120 L--------LGRMGRLIIVGYGGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQG 171

Query: 293 K 293
           K
Sbjct: 172 K 172

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 42.5 bits (99), Expect = 2e-05
 Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 5/80 (6%)

Query: 1  MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRP 60
          M  K   HA+  + +      L + E  +    +   L+++ +A +   D  + +G    
Sbjct: 1  MGLK--AHAMVLEKFNQP---LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR 55

Query: 61 FLPRKFPFIPASDVAGEVIG 80
                     +    EV G
Sbjct: 56 VPLPIILGHEGAGRVVEVNG 75

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (99), Expect = 2e-05
 Identities = 38/177 (21%), Positives = 65/177 (36%), Gaps = 11/177 (6%)

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQ-LAKLGNTH 180
              +GA I     TA++AL  S  VK   +G+  ++L+  ASG VGL A Q     G   
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVK---AGE--SVLVHGASGGVGLAACQIARAYGLKI 56

Query: 181 VTATCGARNIELVKSLGADEVLDYKTPDGAA--LKSPSGRKYDAVINCVTGIPWSTFEPN 238
           +         ++V   GA EV +++  +      K    +  D +I  +  +  S     
Sbjct: 57  LGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 116

Query: 239 LGTTGKVIDFNPSPRV---LLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEG 292
           L   G+VI       +         K+ +     L   +     +    L   ++ G
Sbjct: 117 LSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIG 173

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 40.8 bits (95), Expect = 5e-05
 Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 12/90 (13%)

Query: 22  LKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL 81
            +   V +P     E LL+    S++P      K +           +    VA  V   
Sbjct: 22  FELKTVELPPLKNGEVLLEALFLSVDPYMRIASKRLKEG------AVMMGQQVARVV--- 72

Query: 82  GSEVKNFKVGDKVVAVLSGGGLAEFAVAKE 111
            S+   F  G  V+A     G     ++  
Sbjct: 73  ESKNSAFPAGSIVLAQ---SGWTTHFISDG 99

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 40.5 bits (93), Expect = 7e-05
 Identities = 39/180 (21%), Positives = 64/180 (35%), Gaps = 19/180 (10%)

Query: 122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHV 181
           S  E A I CAG+T ++AL  + G K    G+   + I    G   +       +G   V
Sbjct: 2   SFEEAAPIFCAGVTTYKALKVT-GAK---PGE--WVAIYGIGGLGHVAVQYAKAMGLNVV 55

Query: 182 TATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGT 241
               G   +EL K LGAD V++    D A           A +          F+    +
Sbjct: 56  AVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVS--KPAFQSAYNS 113

Query: 242 TGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSPKG------ENLDFLVKLVKEGKLK 295
             +         VL+    +++       V   +   G      ++L   ++   EGK+K
Sbjct: 114 IRR-----GGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVK 168

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.9 bits (89), Expect = 2e-04
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 7/65 (10%)

Query: 121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTH 180
           V  AE A I CAG+T ++ L Q+   +    GQ   + I+   G +G  AVQ A+    H
Sbjct: 1   VEFAEIAPILCAGVTVYKGLKQT-NAR---PGQ--WVAISGIGG-LGHVAVQYARAMGLH 53

Query: 181 VTATC 185
           V A  
Sbjct: 54  VAAID 58

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 35.8 bits (81), Expect = 0.003
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 121 VSAAEGAGIPCAGLTAHQALTQ 142
           +S  E A  P + LTA+ AL +
Sbjct: 1   LSPEEAAAFPVSFLTAYLALKR 22

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	327
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.97
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.97
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.97
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.97
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.96
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.96
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.96
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.96
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.96
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.96
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.95
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.95
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.95
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.95
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.94
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.94
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.94
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.94
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.93
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.93
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.93
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.92
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.91
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.91
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.91
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.9
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.9
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.9
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.9
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.89
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.89
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.89
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.89
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.89
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.89
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.88
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.88
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.87
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.87
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.87
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.82
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.78
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.77
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.55
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.66
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.65
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.61
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.46
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.45
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.44
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.36
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.32
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.3
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.22
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.17
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.08
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.07
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.07
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.06
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.01
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.98
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.95
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	96.95
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.92
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.89
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.87
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.87
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.85
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.85
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.85
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.84
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.83
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.83
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.79
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.79
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.78
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.76
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.75
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.74
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.74
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.72
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.68
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.63
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.63
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	96.62
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.61
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.61
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.61
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.59
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.57
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.56
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.52
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.5
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.48
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.48
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.44
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.32
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.25
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.24
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.23
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.2
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.19
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.17
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.09
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.04
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.0
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	95.99
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	95.99
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.96
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	95.95
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.9
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	95.76
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.76
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	95.74
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	95.7
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.69
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	95.67
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	95.64
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.61
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	95.59
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.56
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	95.48
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	95.48
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	95.45
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.41
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	95.38
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.36
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.3
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.28
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	95.26
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.23
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.16
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.11
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	95.09
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.08
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.06
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.01
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.99
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	94.99
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.95
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.94
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.93
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	94.92
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	94.92
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	94.89
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	94.79
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	94.73
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.62
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.61
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.6
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	94.56
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.43
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.41
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.41
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	94.29
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	94.24
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	94.16
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	94.05
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.01
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	93.88
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	93.66
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	93.62
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.6
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	93.56
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.4
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.39
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	93.29
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.24
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.21
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	93.18
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	93.15
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	92.97
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.94
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	92.77
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.77
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	92.72
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	92.62
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	92.59
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.46
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.41
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.34
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	92.32
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	92.32
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	92.28
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	92.24
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.13
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.96
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	91.9
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	91.88
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	91.84
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	91.81
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.66
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.64
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	91.59
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	91.56
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	91.5
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.48
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	91.47
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	91.39
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	91.37
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	91.27
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.2
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	91.15
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.01
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	91.0
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	90.93
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.88
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	90.82
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.78
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	90.61
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	90.6
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	90.53
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	90.53
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.53
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.39
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	90.37
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.29
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	90.24
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	90.24
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	90.09
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	90.07
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	90.06
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.06
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	90.04
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	89.92
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	89.88
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	89.8
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.66
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	89.66
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.6
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	89.57
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	89.51
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	89.43
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	89.41
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	89.26
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	89.23
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	89.21
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	88.9
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	88.8
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	88.47
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.3
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.26
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	88.25
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	88.21
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.14
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	88.03
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	87.84
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	87.82
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	87.79
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	87.76
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	87.72
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	87.63
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	87.47
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	87.43
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	87.39
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	87.38
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	87.37
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.32
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	87.24
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	87.23
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	87.19
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	86.96
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.93
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	86.92
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	86.42
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	86.23
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	86.21
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	85.85
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	85.85
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	85.72
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	85.46
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.35
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	85.34
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.28
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.12
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	84.98
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	84.72
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	84.28
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	84.21
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	84.03
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.79
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	83.79
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	83.72
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	83.56
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	83.39
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	83.29
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	83.26
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	83.23
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	82.85
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	82.83
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	82.54
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	82.53
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	82.47
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	82.42
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	82.41
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	82.09
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	82.09
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	82.07
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	82.05
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.79
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	81.78
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	81.68
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	81.58
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	81.14
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	81.04
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	80.78
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	80.67
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	80.46
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	80.17
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.04

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-31  Score=205.63  Aligned_cols=147  Identities=29%  Similarity=0.474  Sum_probs=133.4

Q ss_pred             ceEEEEEeccCCCccceEEe-eccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            6 VMHAVQYDSYGGGVAGLKHV-EVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         6 ~~~a~~~~~~g~~~~~l~~~-~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      .|||++++++|+ |+.++++ +.+.|+|.+|||+|||.++|||++|++.++|.++..  ..+|.++|||++|+|+++|++
T Consensus         2 ~MkAv~~~~~G~-p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~--~~~p~i~G~e~~G~V~~vG~~   78 (150)
T d1yb5a1           2 LMRAVRVFEFGG-PEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRK--PLLPYTPGSDVAGVIEAVGDN   78 (150)
T ss_dssp             EEEEEEESSCSS-GGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCC--CCSSBCCCSCEEEEEEEECTT
T ss_pred             ceeEEEEEccCC-cceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCcc--ccccccCccceeeeeEeecce
Confidence            489999999996 6889885 579999999999999999999999999999987532  367899999999999999999


Q ss_pred             CCCCCCCCEEEEEc-cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE
Q 020314           85 VKNFKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT  160 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~  160 (327)
                      +++|++||||++.. .+|+|+||++++++.++++|+++++++||+++..+.|+|+++...++.     +.|+++||.
T Consensus        79 v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~-----~~G~~vliL  150 (150)
T d1yb5a1          79 ASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSG-----ATGKMILLL  150 (150)
T ss_dssp             CTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSC-----CSSEEEEEC
T ss_pred             eeccccCccccccccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCc-----ccCCEEEEC
Confidence            99999999998865 568999999999999999999999999999999999999998888877     889999873

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=3.1e-31  Score=209.63  Aligned_cols=147  Identities=27%  Similarity=0.341  Sum_probs=131.0

Q ss_pred             CCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314            2 AGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         2 ~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      +.|.||||++++++|++   +++++.+.|.|.++||+||+.++|||++|++.++|.++.  ...+|.++|||++|+|+++
T Consensus         1 ~~P~tMkA~v~~~~g~p---l~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~--~~~~P~i~GhE~~G~V~~~   75 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAP---LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPV--KPPLPFIPGHEGVGYVAAV   75 (175)
T ss_dssp             CCCSEEEEEEBCSTTSC---CEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSS--CCCSSBCCCSCEEEEEEEE
T ss_pred             CcchhcEEEEEEeCCCC---CEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccc--cccCCcCCCCcceEEEEEe
Confidence            46899999999999876   899999999999999999999999999999999998752  2368999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchH
Q 020314           82 GSEVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAG  133 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  133 (327)
                      |++++++++||||+...                            .+|+|+||+.+++++++++|++++++.++++..++
T Consensus        76 G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~  155 (175)
T d1llua1          76 GSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDI  155 (175)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGH
T ss_pred             CCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHH
Confidence            99999999999998632                            35799999999999999999999999898888899


Q ss_pred             HHHHHHHHHhhCCccCCCCCCCeEEEE
Q 020314          134 LTAHQALTQSLGVKLDGSGQQKNILIT  160 (327)
Q Consensus       134 ~ta~~al~~~~~~~~~~~~~~~~vlV~  160 (327)
                      .|+++++ +...      .+|++|||.
T Consensus       156 ~t~~~~~-~~g~------~~G~~VLVl  175 (175)
T d1llua1         156 NQILDQM-RAGQ------IEGRIVLEM  175 (175)
T ss_dssp             HHHHHHH-HTTC------CSSEEEEEC
T ss_pred             HHHHHHH-HhCC------CCCCEEEeC
Confidence            9999888 4443      479999984

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.97  E-value=9.9e-32  Score=213.01  Aligned_cols=147  Identities=19%  Similarity=0.239  Sum_probs=129.1

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |.|++++++++    |++++.+.|+++++||+||+.++|||++|++.+.+.........+|.++|||++|+|+++|++++
T Consensus         2 ~maAVl~g~~~----l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~   77 (178)
T d1e3ja1           2 NLSAVLYKQND----LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK   77 (178)
T ss_dssp             CEEEEEEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred             ceEEEEEcCCc----EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccC
Confidence            34555666544    99999999999999999999999999999998887654333346789999999999999999999


Q ss_pred             CCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           87 NFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        87 ~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      +|++||||+..+                            .+|+|+||+++++++++++|+++++++++.+++++.|+|+
T Consensus        78 ~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~  157 (178)
T d1e3ja1          78 HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD  157 (178)
T ss_dssp             SCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHH
T ss_pred             CCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHH
Confidence            999999998643                            4589999999999999999999999999999999999999


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCC
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAAS  163 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~  163 (327)
                      ++ +.+++     ++|++|+|.||.
T Consensus       158 a~-~~~~~-----~~g~~VlVig~C  176 (178)
T d1e3ja1         158 AF-EAARK-----KADNTIKVMISC  176 (178)
T ss_dssp             HH-HHHHH-----CCTTCSEEEEEC
T ss_pred             HH-HHhCC-----CCCCEEEEEccc
Confidence            98 67777     899999999975

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=4.7e-31  Score=210.26  Aligned_cols=151  Identities=18%  Similarity=0.209  Sum_probs=132.0

Q ss_pred             CCCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEe
Q 020314            1 MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG   80 (327)
Q Consensus         1 m~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   80 (327)
                      |.+|.+||||++..+++ .+.+++++.+.++++++||+||+.++|||++|++.+.|.++   ...+|+++|||++|+|++
T Consensus         1 m~~P~~~ka~~~~~~~~-~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~---~~~~P~i~GHE~~G~Vv~   76 (192)
T d1piwa1           1 MSYPEKFEGIAIQSHED-WKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG---NMKMPLVVGHEIVGKVVK   76 (192)
T ss_dssp             CCTTTCEEEEEECCSSS-TTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS---CCCSSEECCCCEEEEEEE
T ss_pred             CCCCceeEEEEEeCCCc-CCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCC---CCCCCcCcccccccchhh
Confidence            88999999999998875 67788888887778999999999999999999999999865   347899999999999999


Q ss_pred             cCCCC-CCCCCCCEEEEEc-----------------------------------cCcccceeEeecCCceeeCCCCCChh
Q 020314           81 LGSEV-KNFKVGDKVVAVL-----------------------------------SGGGLAEFAVAKESLTVARPQEVSAA  124 (327)
Q Consensus        81 vG~~~-~~~~~Gd~V~~~~-----------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~  124 (327)
                      +|+++ +.+++||||...+                                   .+|+|+||+++++.+++++|++++++
T Consensus        77 vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e  156 (192)
T d1piwa1          77 LGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVE  156 (192)
T ss_dssp             ECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEE
T ss_pred             cccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHH
Confidence            99987 6799999996322                                   35899999999999999999999998


Q ss_pred             hhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314          125 EGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus       125 ~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      +|+.+...+.|||+++ +.+++     +++++|+|..
T Consensus       157 ~Aal~~~~~~ta~~~l-~~~~v-----k~g~~Vvv~~  187 (192)
T d1piwa1         157 TLPVGEAGVHEAFERM-EKGDV-----RYRFTLVGYD  187 (192)
T ss_dssp             EEESSHHHHHHHHHHH-HHTCC-----SSEEEEECCH
T ss_pred             HHHHHHHHHHHHHHHH-HHhCC-----CCCCEEEEEC
Confidence            8776665678999999 57888     8999999863

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.97  E-value=2e-30  Score=208.64  Aligned_cols=147  Identities=17%  Similarity=0.140  Sum_probs=134.6

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .++++||+++.+++++   +++++.+.|+|.++||+||+.++|||++|++.+.|...   +..+|.++|||++|+|+++|
T Consensus         5 ~~~~~kAav~~~~~~p---l~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~---~~~~p~i~GhE~~G~v~~vG   78 (199)
T d1cdoa1           5 KVIKCKAAVAWEANKP---LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH---KDGFPVVLGHEGAGIVESVG   78 (199)
T ss_dssp             SCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCC---TTSCSEECCCCEEEEEEEEC
T ss_pred             CceEEEEEEEecCCCC---cEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhccc---ccccccccccccceEEEEEc
Confidence            5788999999998876   99999999999999999999999999999999998754   23689999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCce
Q 020314           83 SEVKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLT  114 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~  114 (327)
                      ++++++++||||+...                                                .+|+|+||+++++.++
T Consensus        79 ~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~  158 (199)
T d1cdoa1          79 PGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAV  158 (199)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGE
T ss_pred             CCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHE
Confidence            9999999999998754                                                1489999999999999


Q ss_pred             eeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE
Q 020314          115 VARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT  160 (327)
Q Consensus       115 ~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~  160 (327)
                      +++|+++++++++++.+++.|+++++....+.     +.|++|||.
T Consensus       159 ~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~-----~~G~tVlv~  199 (199)
T d1cdoa1         159 AKIDPSVKLDEFITHRMPLESVNDAIDLMKHG-----KCIRTVLSL  199 (199)
T ss_dssp             EECCTTSCCGGGEEEEEEGGGHHHHHHHHHTT-----CCSEEEEEC
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-----CCCCEEEeC
Confidence            99999999999999999999999999888887     889999984

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.96  E-value=4.1e-30  Score=207.71  Aligned_cols=144  Identities=22%  Similarity=0.219  Sum_probs=129.9

Q ss_pred             CccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecC
Q 020314            3 GKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLG   82 (327)
Q Consensus         3 ~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   82 (327)
                      .|+||||+++.++|++   +++++.+.|+|.++||||||.++|||++|++.++|.++    ..+|.++|||++|+|+++|
T Consensus         5 ~~~~~KAaV~~~~g~p---l~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~----~~~P~v~GHE~~G~V~~vG   77 (202)
T d1e3ia1           5 KVIKCKAAIAWKTGSP---LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK----ALFPVVLGHECAGIVESVG   77 (202)
T ss_dssp             SCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC----CCSSBCCCCEEEEEEEEEC
T ss_pred             CeEEEEEEEEccCCCC---CEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc----cccccccccccceEEeeec
Confidence            5899999999999876   99999999999999999999999999999999999864    4679999999999999999


Q ss_pred             CCCCCCCCCCEEEEEc----------------------------------------------------cCcccceeEeec
Q 020314           83 SEVKNFKVGDKVVAVL----------------------------------------------------SGGGLAEFAVAK  110 (327)
Q Consensus        83 ~~~~~~~~Gd~V~~~~----------------------------------------------------~~g~~a~~~~~~  110 (327)
                      ++++++++||||+...                                                    ..|+|+||++++
T Consensus        78 ~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~  157 (202)
T d1e3ia1          78 PGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVS  157 (202)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEE
T ss_pred             CCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEe
Confidence            9999999999998743                                                    038999999999


Q ss_pred             CCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314          111 ESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus       111 ~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      +..++++|++++++.++.+.+++.+++.++...        ++|++|.|..
T Consensus       158 ~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~~--------k~G~~V~vi~  200 (202)
T d1e3ia1         158 EANLARVDDEFDLDLLVTHALPFESINDAIDLM--------KEGKSIRTIL  200 (202)
T ss_dssp             GGGEEECCTTSCGGGGEEEEEEGGGHHHHHHHH--------HTTCCSEEEE
T ss_pred             hhhEEECCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCCCEEEEEE
Confidence            999999999999999999988988999888543        7888888764

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.96  E-value=6.2e-30  Score=200.77  Aligned_cols=142  Identities=20%  Similarity=0.316  Sum_probs=126.4

Q ss_pred             EEEEEeccCCCccceEEeeccCCCC-CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            8 HAVQYDSYGGGVAGLKHVEVPVPTP-NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         8 ~a~~~~~~g~~~~~l~~~~~~~~~~-~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||++++++|++   |++++.+.|++ .++||+||+.++|||++|++.+.|.++......+|.++|||++|+|+++|++++
T Consensus         1 kA~~~~~~g~p---l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~   77 (171)
T d1h2ba1           1 KAARLHEYNKP---LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVE   77 (171)
T ss_dssp             CEEEESSTTSC---CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CEEEEEeCCCC---CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCC
Confidence            79999999987   99999999985 689999999999999999999998765332336899999999999999999999


Q ss_pred             CCCCCCEEEEEc---------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHH
Q 020314           87 NFKVGDKVVAVL---------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQA  139 (327)
Q Consensus        87 ~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~a  139 (327)
                      ++++||||+..+                           .+|+|+||+++++++++++|++++++.++++.+++.|+|++
T Consensus        78 ~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~a  157 (171)
T d1h2ba1          78 GLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLER  157 (171)
T ss_dssp             SCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHH
T ss_pred             cCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHH
Confidence            999999998743                           45899999999999999999999999898888999999999


Q ss_pred             HHHhhCCccCCCCCCCeEEE
Q 020314          140 LTQSLGVKLDGSGQQKNILI  159 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV  159 (327)
                      + +..++      .|++|||
T Consensus       158 l-~~~~~------~G~~VlI  170 (171)
T d1h2ba1         158 L-EKGEV------LGRAVLI  170 (171)
T ss_dssp             H-HTTCC------SSEEEEE
T ss_pred             H-HhcCC------CCCEEEe
Confidence            9 45554      6899998

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3.2e-29  Score=191.94  Aligned_cols=142  Identities=23%  Similarity=0.327  Sum_probs=124.3

Q ss_pred             EEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCCC
Q 020314            8 HAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVKN   87 (327)
Q Consensus         8 ~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   87 (327)
                      +.+.++++|. |+.|++++.+.|+|.+|||+|||.++|||++|+++++|.++   ...+|.++|||++|+|+++|+++++
T Consensus         2 ~~i~~~~~G~-pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~---~~~~p~~~G~e~~G~V~~vG~~v~~   77 (147)
T d1qora1           2 TRIEFHKHGG-PEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP---PPSLPSGLGTEAAGIVSKVGSGVKH   77 (147)
T ss_dssp             EEEEBSSCCS-GGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CSSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             eEEEEcccCC-CceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCC---CCcceeeeccccccceeeeeeeccc
Confidence            4678999997 68999999999999999999999999999999999999875   2378999999999999999999999


Q ss_pred             CCCCCEEEEEc-cCcccceeEeecCCceeeCCCCCChhhh--cccCchHHHHHHHHHHhhCCccCCCCCCCeEEE
Q 020314           88 FKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQEVSAAEG--AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI  159 (327)
Q Consensus        88 ~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~~~~~~~a--a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV  159 (327)
                      |++||||+... ..|+|+||.+++.+.++++|++++++++  ++++....++++++.+ .++     ++|++|||
T Consensus        78 ~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~-----~~G~~VLI  146 (147)
T d1qora1          78 IKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRA-----TQGSSLLI  146 (147)
T ss_dssp             CCTTCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTC-----CCBCCEEE
T ss_pred             ccccceeeeeccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCC-----CCCCEEEe
Confidence            99999997543 6789999999999999999999987754  4556666788888744 567     89999998

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.96  E-value=1.2e-29  Score=203.39  Aligned_cols=146  Identities=18%  Similarity=0.146  Sum_probs=130.6

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      .++|||+++.++|++   |++++.|.|+|.++|||||+.++|||++|++++.|.++   ...+|.++|||++|+|+++|+
T Consensus         4 ~~~~kAav~~~~g~~---l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~---~~~~p~v~GhE~~G~V~~vG~   77 (197)
T d2fzwa1           4 VIKCKAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESVGE   77 (197)
T ss_dssp             CEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEECT
T ss_pred             ceEEEEEEEccCCCC---CEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcc---cccccccCCcceeeEEEeecC
Confidence            478999999999887   99999999999999999999999999999999999764   246899999999999999999


Q ss_pred             CCCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCcee
Q 020314           84 EVKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLTV  115 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~~  115 (327)
                      +++.+++||||+...                                                .+|+|+||+++++..++
T Consensus        78 ~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~  157 (197)
T d2fzwa1          78 GVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVA  157 (197)
T ss_dssp             TCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred             CceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEE
Confidence            999999999998743                                                03899999999999999


Q ss_pred             eCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE
Q 020314          116 ARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT  160 (327)
Q Consensus       116 ~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~  160 (327)
                      ++|+++++++++.+.+++.|++.++.+...-     +.+++|||.
T Consensus       158 ~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g-----~~~~tvvvi  197 (197)
T d2fzwa1         158 KIDPLIKVDEFVTHNLSFDEINKAFELMHSG-----KSIRTVVKI  197 (197)
T ss_dssp             ECCTTSCSGGGEEEEEEGGGHHHHHHHHHHT-----CCSEEEEEC
T ss_pred             ECCCCCCHHHHhhhhhHHHHHHHHHHhccCC-----CcCCEEEeC
Confidence            9999999999999999999999998554433     678888873

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=2e-29  Score=187.98  Aligned_cols=130  Identities=27%  Similarity=0.349  Sum_probs=118.9

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      ||||+++++|++   +++++.+.|+|.++||+||+.++|||++|++.++|.++.  ...+|+++|||++|+|        
T Consensus         1 MkA~~~~~~G~~---l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V--------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP---LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVV--------   67 (131)
T ss_dssp             CEEEEECSTTSC---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEE--------
T ss_pred             CcEEEEccCCCC---CEEEEccCCCCCCCEEEEEEEEEeccccccccccccccc--cccceeEeeeeeEEee--------
Confidence            899999999876   899999999999999999999999999999999998753  2368999999999998        


Q ss_pred             CCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEE
Q 020314           87 NFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILI  159 (327)
Q Consensus        87 ~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV  159 (327)
                         +||||+++..+|+|+||++++++.++++|+++++++||++++.+.|||+++.+.+       +.|++||+
T Consensus        68 ---vGd~V~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g-------~~g~tvl~  130 (131)
T d1iz0a1          68 ---EGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG-------HTGKVVVR  130 (131)
T ss_dssp             ---TTEEEEEECSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT-------CCBEEEEE
T ss_pred             ---ccceEEEEeccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc-------cCCCEEEE
Confidence               3999999999999999999999999999999999999999999999999996654       45888876

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=7.7e-29  Score=195.17  Aligned_cols=141  Identities=24%  Similarity=0.324  Sum_probs=120.4

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||++++++|++   +++++.+.|+|++|||+||++++|||++|++++++....  ...+|.++|||++|+|+++|++++
T Consensus         1 MkA~v~~~~g~p---l~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~--~~~~p~v~GhE~~G~Vv~vG~~v~   75 (171)
T d1rjwa1           1 MKAAVVEQFKEP---LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPV--KPKLPLIPGHEGVGIVEEVGPGVT   75 (171)
T ss_dssp             CEEEEBSSTTSC---CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CeEEEEecCCCC---cEEEEeECCCCCCCeEEEEEEEeeccccceeeeeccccc--ccccccccCCEEEEEEEEeccccc
Confidence            899999998876   999999999999999999999999999999998876542  236889999999999999999999


Q ss_pred             CCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHH
Q 020314           87 NFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQ  138 (327)
Q Consensus        87 ~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  138 (327)
                      ++++||||+..+                            .+|+|+||+++++++++++|++++++.|+ +. ...++++
T Consensus        76 ~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~~~~~  153 (171)
T d1rjwa1          76 HLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KINEVFD  153 (171)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHHHHHH
T ss_pred             CceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHHHHHH
Confidence            999999997533                            35899999999999999999999986655 43 3456777


Q ss_pred             HHHHhhCCccCCCCCCCeEEEEc
Q 020314          139 ALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      ++. .+.+      +|++|||.|
T Consensus       154 ~~~-~~~~------~G~tVlViG  169 (171)
T d1rjwa1         154 RML-KGQI------NGRVVLTLE  169 (171)
T ss_dssp             HHH-TTCC------SSEEEEECC
T ss_pred             HHH-hcCC------CCCEEEEeC
Confidence            663 3444      599999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=5e-29  Score=191.81  Aligned_cols=145  Identities=20%  Similarity=0.233  Sum_probs=127.9

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      .+||||+++++++ +..+++++.+.|+|.+|||||||.++|||++|++.+.|.++.  ....|.++|+|++|+|++  ..
T Consensus         2 ~~~KA~v~~~~~~-~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~--~~~~p~v~g~e~~G~v~~--~~   76 (152)
T d1xa0a1           2 SAFQAFVVNKTET-EFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKI--VKTYPFVPGIDLAGVVVS--SQ   76 (152)
T ss_dssp             CEEEEEEEEEETT-EEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSS--CCSSSBCCCSEEEEEEEE--CC
T ss_pred             CceEEEEEEecCC-ceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccc--cccccceeeeeeeeeeec--cC
Confidence            5799999999987 566789999999999999999999999999999999887653  236789999999999999  66


Q ss_pred             CCCCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEE
Q 020314           85 VKNFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNIL  158 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vl  158 (327)
                      ++.+++||+|+...      .+|+|+||++++++.++++|++++ .+||++++++.|+|+++....++     + |++||
T Consensus        77 ~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~-----~-G~tVL  149 (152)
T d1xa0a1          77 HPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGEL-----R-GRTVV  149 (152)
T ss_dssp             SSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCC-----C-SEEEE
T ss_pred             CCccccCCEEEEecCccccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCC-----C-CCEEE
Confidence            78899999998764      568999999999999999999998 57888888888999988778776     5 99999


Q ss_pred             EEc
Q 020314          159 ITA  161 (327)
Q Consensus       159 V~g  161 (327)
                      |.|
T Consensus       150 ~l~  152 (152)
T d1xa0a1         150 RLA  152 (152)
T ss_dssp             ECC
T ss_pred             EcC
Confidence            975

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.3e-29  Score=196.93  Aligned_cols=145  Identities=23%  Similarity=0.308  Sum_probs=122.5

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      ...|+|++++++++    |++++.+.|+|.++||+|||.++|||++|++++++......+..+|.++|||++|+|+++|+
T Consensus         5 ~p~~~a~V~~gp~~----l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   80 (185)
T d1pl8a1           5 KPNNLSLVVHGPGD----LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGS   80 (185)
T ss_dssp             CCCCEEEEEEETTE----EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECT
T ss_pred             CCCCEEEEEeCCCe----EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEecc
Confidence            44689999997654    99999999999999999999999999999999886543222346789999999999999999


Q ss_pred             CCCCCCCCCEEEEEc----------------------------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHH
Q 020314           84 EVKNFKVGDKVVAVL----------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLT  135 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~----------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t  135 (327)
                      +++++++||||+..+                            .+|+|+||++++.++++++|+++++++++.++.  .+
T Consensus        81 ~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~pl--~~  158 (185)
T d1pl8a1          81 SVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPL--EK  158 (185)
T ss_dssp             TCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEEG--GG
T ss_pred             ceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHHH--HH
Confidence            999999999998643                            457899999999999999999999999887653  35


Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEE
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILIT  160 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~  160 (327)
                      +++++ +..++     +.|++|||.
T Consensus       159 a~~a~-~~~~~-----~~G~~VlIg  177 (185)
T d1pl8a1         159 ALEAF-ETFKK-----GLGLKIMLK  177 (185)
T ss_dssp             HHHHH-HHHHT-----TCCSEEEEE
T ss_pred             HHHHH-HHhCC-----CCCCEEEEE
Confidence            66666 45556     789999983

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.95  E-value=1.1e-27  Score=191.18  Aligned_cols=141  Identities=19%  Similarity=0.241  Sum_probs=122.1

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      .+|+|+++.+.+++   |++++.+.|+|+++||+||+.++|||++|++.+.|.++    .++|.++|||++|+|+++|++
T Consensus         2 k~~~Aav~~~~g~~---l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~----~~~P~i~GHE~~G~V~~vG~~   74 (194)
T d1f8fa1           2 KDIIAAVTPCKGAD---FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP----VPLPAVLGHEGSGIIEAIGPN   74 (194)
T ss_dssp             EEEEEEEBCSTTCC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCEEEEEEEEECTT
T ss_pred             ceeEEEEEcCCCCC---cEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc----ccCCcccccceEEEeeecCcc
Confidence            47899999998876   99999999999999999999999999999999999874    368999999999999999999


Q ss_pred             CCCCCCCCEEEEEc-------------------------------------------------cCcccceeEeecCCcee
Q 020314           85 VKNFKVGDKVVAVL-------------------------------------------------SGGGLAEFAVAKESLTV  115 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~-------------------------------------------------~~g~~a~~~~~~~~~~~  115 (327)
                      +++|++||||+...                                                 ..|+|+||.+++..+++
T Consensus        75 v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~  154 (194)
T d1f8fa1          75 VTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTV  154 (194)
T ss_dssp             CCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEE
T ss_pred             ceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEE
Confidence            99999999996532                                                 12678999999999999


Q ss_pred             eCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEE
Q 020314          116 ARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTA  183 (327)
Q Consensus       116 ~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~  183 (327)
                      ++|++++++++                              +++.| +|++|++++|+++.+|+..+.
T Consensus       155 ~ip~~i~~~~~------------------------------~~i~g-~g~~g~~aiq~a~~~g~~~ii  191 (194)
T d1f8fa1         155 KVTKDFPFDQL------------------------------VKFYA-FDEINQAAIDSRKGITLKPII  191 (194)
T ss_dssp             EECTTCCGGGG------------------------------EEEEE-GGGHHHHHHHHHHTSCSEEEE
T ss_pred             ECCCCCCcccE------------------------------EEEeC-cHHHHHHHHHHHHHcCCCEEE
Confidence            99988775432                              44445 899999999999999985443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=1.5e-28  Score=192.57  Aligned_cols=170  Identities=20%  Similarity=0.215  Sum_probs=137.3

Q ss_pred             CChhhhcccCchHHHHHHHHH---HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhc
Q 020314          121 VSAAEGAGIPCAGLTAHQALT---QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSL  196 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~---~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~l  196 (327)
                      +|++|||+++.++.|||+++.   +..+.     ++|++|||+||+|++|.+++|+|++.|++|+++++ +++.++++++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~-----~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~l   75 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLT-----PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL   75 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCC-----GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCC-----CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhc
Confidence            589999999999999997754   34666     78999999999999999999999999999999995 5899999999


Q ss_pred             CCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-
Q 020314          197 GADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-  275 (327)
Q Consensus       197 g~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-  275 (327)
                      |++.++|+++...+..+.++++++|+|||++|++.+..++++|+++|+++.+|...+...+++...+.++++++.+... 
T Consensus        76 Ga~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~~  155 (176)
T d1xa0a2          76 GAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSV  155 (176)
T ss_dssp             TCSEEEECC---------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSS
T ss_pred             ccceeeecchhHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeCC
Confidence            9999999877665666677888999999999999999999999999999999987766667777788888998888533 


Q ss_pred             CCCHHHHHHHHHHHHCCceeE
Q 020314          276 SPKGENLDFLVKLVKEGKLKT  296 (327)
Q Consensus       276 ~~~~~~~~~~~~~~~~g~l~~  296 (327)
                      ....+....+++.++ ++|+|
T Consensus       156 ~~~~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         156 YCPMDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             SCCHHHHHHHHHHHH-TTTCC
T ss_pred             cCCHHHHHHHHHHHh-cccCC
Confidence            334566666666664 55543

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.95  E-value=1.8e-27  Score=188.21  Aligned_cols=143  Identities=24%  Similarity=0.325  Sum_probs=118.1

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCC-----CCCCCCeeecccceEEEEec
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF-----LPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~-----~~~~~p~~~G~e~~G~V~~v   81 (327)
                      |||++++++|++   |++++.+.|+|+++||+||+.++|||++|+++++|.++..     ....+|+++|||++|+|+++
T Consensus         1 MKA~~~~~~G~p---l~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~   77 (177)
T d1jvba1           1 MRAVRLVEIGKP---LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV   77 (177)
T ss_dssp             CEEEEECSTTSC---CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred             CeEEEEEeCCCC---CEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeee
Confidence            899999999986   9999999999999999999999999999999999976431     12368999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEc---------------------------cCcccceeEeecCCc-eeeCCCCCChhhhcccCchH
Q 020314           82 GSEVKNFKVGDKVVAVL---------------------------SGGGLAEFAVAKESL-TVARPQEVSAAEGAGIPCAG  133 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~---------------------------~~g~~a~~~~~~~~~-~~~ip~~~~~~~aa~~~~~~  133 (327)
                      |++++++++||||+...                           .+|+|+||+++++.. ++++|+..+.+.|+....++
T Consensus        78 g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~  157 (177)
T d1jvba1          78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEA  157 (177)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGH
T ss_pred             ccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHH
Confidence            99999999999998654                           348999999998765 55665544444444446788


Q ss_pred             HHHHHHHHHhhCCccCCCCCCCeEEE
Q 020314          134 LTAHQALTQSLGVKLDGSGQQKNILI  159 (327)
Q Consensus       134 ~ta~~al~~~~~~~~~~~~~~~~vlV  159 (327)
                      .++++++ +..++      .|++|||
T Consensus       158 ~~a~~~~-~~~~~------~G~~VlI  176 (177)
T d1jvba1         158 NEAIDNL-ENFKA------IGRQVLI  176 (177)
T ss_dssp             HHHHHHH-HTTCC------CSEEEEE
T ss_pred             HHHHHHH-Hhhcc------cCCceEC
Confidence            8999998 55554      4888987

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.95  E-value=8.4e-28  Score=193.32  Aligned_cols=146  Identities=18%  Similarity=0.173  Sum_probs=123.9

Q ss_pred             CCCccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEe
Q 020314            1 MAGKAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIG   80 (327)
Q Consensus         1 m~~~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   80 (327)
                      |-.+++|||+++.+++++   |++++.+.|+|+++||||||.++|||++|++.++|.++    ..+|.++|||++|+|++
T Consensus         3 ~~~~~k~KAavl~~~~~~---l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~----~~~P~i~GHE~~G~Vv~   75 (198)
T d2jhfa1           3 AGKVIKCKAAVLWEEKKP---FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVES   75 (198)
T ss_dssp             TTSCEEEEEEEBCSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEE
T ss_pred             CCCceEEEEEEEecCCCC---CEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc----cccceecccceeEEEEe
Confidence            346889999999998876   99999999999999999999999999999999999874    46899999999999999


Q ss_pred             cCCCCCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCC
Q 020314           81 LGSEVKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKES  112 (327)
Q Consensus        81 vG~~~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~  112 (327)
                      +|++++++++||||+...                                                ..|+|+||.++++.
T Consensus        76 vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~  155 (198)
T d2jhfa1          76 IGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEI  155 (198)
T ss_dssp             ECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGG
T ss_pred             cCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHH
Confidence            999999999999997744                                                12899999999999


Q ss_pred             ceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314          113 LTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus       113 ~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      +++++|+.++++.++....++.+...+...   +     ++|++|+|..
T Consensus       156 ~~~~~p~~~~~e~l~~~~~~~~~v~~g~~~---l-----~~G~~VaVi~  196 (198)
T d2jhfa1         156 SVAKIDAAFALDPLITHVLPFEKINEGFDL---L-----RSGESIRTIL  196 (198)
T ss_dssp             GEEECCTTSCCGGGEEEEEEGGGHHHHHHH---H-----HTTCCSEEEE
T ss_pred             HeEECCCCCCHHHHHHHHHHHHhhhhCCce---e-----eCCCEEEEEE
Confidence            999999999888776665554444444322   2     6788888764

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=7.9e-28  Score=189.78  Aligned_cols=140  Identities=17%  Similarity=0.210  Sum_probs=119.9

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      +++|||+++.+++++   |++++.+.|++.++||||||.++|||++|++.++|..+.   ..+|+++|||++|+|+++|+
T Consensus         2 ~~k~kA~v~~~~~~p---l~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~---~~~P~vlGHE~~G~V~~vG~   75 (184)
T d1vj0a1           2 GLKAHAMVLEKFNQP---LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR---VPLPIILGHEGAGRVVEVNG   75 (184)
T ss_dssp             CEEEEEEEBCSTTSC---CEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTT---CCSSBCCCCEEEEEEEEESS
T ss_pred             CceEEEEEEecCCCC---cEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCc---cccccccceeeeeeeeEEec
Confidence            478999999998876   999999999999999999999999999999999998752   36899999999999999999


Q ss_pred             CCC-----CCCCCCEEEEEc------------------------------------cCcccceeEeec-CCceeeCCCCC
Q 020314           84 EVK-----NFKVGDKVVAVL------------------------------------SGGGLAEFAVAK-ESLTVARPQEV  121 (327)
Q Consensus        84 ~~~-----~~~~Gd~V~~~~------------------------------------~~g~~a~~~~~~-~~~~~~ip~~~  121 (327)
                      +++     .+++||||+...                                    .+|+|+||++++ +.+++++|+++
T Consensus        76 ~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l  155 (184)
T d1vj0a1          76 EKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKI  155 (184)
T ss_dssp             CCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTC
T ss_pred             cccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCC
Confidence            986     468999998632                                    268999999996 57999999999


Q ss_pred             ChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEc
Q 020314          122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITA  161 (327)
Q Consensus       122 ~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g  161 (327)
                      ++++      ++.+|++++ +.+++     ++|++|||+.
T Consensus       156 ~~~~------pl~~A~~a~-~~~~~-----~~G~~VlI~~  183 (184)
T d1vj0a1         156 THRL------PLKEANKAL-ELMES-----REALKVILYP  183 (184)
T ss_dssp             CEEE------EGGGHHHHH-HHHHH-----TSCSCEEEEC
T ss_pred             CHHH------HHHHHHHHH-HHhCC-----CcCCEEEEee
Confidence            8653      234677777 56677     8999999974

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.94  E-value=8.9e-30  Score=204.28  Aligned_cols=154  Identities=21%  Similarity=0.254  Sum_probs=128.3

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCC-------CCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEE
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTP-------NKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVI   79 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~-------~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~   79 (327)
                      +||++++++++    +++++.+.|++       .++||+||+.++|||++|+++++|.++    ..+|.++|||++|+|+
T Consensus         2 ~kA~v~~~~~~----le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~----~~~P~v~GHE~~G~Vv   73 (201)
T d1kola1           2 NRGVVYLGSGK----VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT----AQVGLVLGHEITGEVI   73 (201)
T ss_dssp             EEEEEEEETTE----EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC----CCTTCBCCCCEEEEEE
T ss_pred             cEEEEEeCCCc----eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc----cccceeccceeeeeee
Confidence            79999999775    99999998864       469999999999999999999999864    4689999999999999


Q ss_pred             ecCCCCCCCCCCCEEEEEc-------------------------------------cCcccceeEeecCC--ceeeCCCC
Q 020314           80 GLGSEVKNFKVGDKVVAVL-------------------------------------SGGGLAEFAVAKES--LTVARPQE  120 (327)
Q Consensus        80 ~vG~~~~~~~~Gd~V~~~~-------------------------------------~~g~~a~~~~~~~~--~~~~ip~~  120 (327)
                      ++|+++++|++||||+..+                                     .+|+|+||+++|..  ++++||++
T Consensus        74 ~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~  153 (201)
T d1kola1          74 EKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDR  153 (201)
T ss_dssp             EECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCH
T ss_pred             ccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCC
Confidence            9999999999999997432                                     25899999999853  79999998


Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT  179 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~  179 (327)
                      .++.+++.+..++.++++++ ...+.     +.+    ++| +|++|+.++|.||.+|+
T Consensus       154 ~~~~~~~~~~~~~~~~~~a~-~~~~~-----~~g----~~g-~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         154 DKAMEKINIAEVVGVQVISL-DDAPR-----GYG----EFD-AGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HHHHHTCCHHHHHTEEEECG-GGHHH-----HHH----HHH-HTCSCEEEECTTCSSCC
T ss_pred             CChHHHHHHHHHHHHHHHHH-HhCCC-----CCe----EEe-eCHHHHHHHHHHHHcCC
Confidence            77777777777777777776 33333     233    246 89999999999999886

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1e-27  Score=189.27  Aligned_cols=165  Identities=22%  Similarity=0.289  Sum_probs=139.7

Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCC
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGAD  199 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~  199 (327)
                      +|+++||++++++.|||+++.+..++     ++|++|||+|++|++|++++|+|+++|++|++++++ ++++.++++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~-----~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~   75 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACV-----KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH   75 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCC-----CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCC-----CCCCEEEEEeccccccccccccccccCcccccccccccccccccccCcc
Confidence            58999999999999999999888888     899999999999999999999999999999999854 678999999999


Q ss_pred             EEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-C
Q 020314          200 EVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-S  276 (327)
Q Consensus       200 ~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~  276 (327)
                      .++|+++.+  .++.+.++++++|++|||+|++.++.++++++++|+++.+|....  ..+....+..+++++.++.. .
T Consensus        76 ~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~--~~~~~~~~~~k~~~i~g~~~~~  153 (174)
T d1yb5a2          76 EVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT--IEINPRDTMAKESSIIGVTLFS  153 (174)
T ss_dssp             EEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC--EEECTHHHHTTTCEEEECCGGG
T ss_pred             cccccccccHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCC--CCCCHHHHHHCCCEEEEEEecC
Confidence            999998877  345567788899999999998889999999999999999986543  23445566778888887543 3


Q ss_pred             CCHHHHHHHHHHHHCC
Q 020314          277 PKGENLDFLVKLVKEG  292 (327)
Q Consensus       277 ~~~~~~~~~~~~~~~g  292 (327)
                      ..++++++++++++++
T Consensus       154 ~~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         154 STKEEFQQYAAALQAG  169 (174)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHH
Confidence            4577788888777653

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.94  E-value=2.3e-27  Score=190.11  Aligned_cols=142  Identities=19%  Similarity=0.229  Sum_probs=120.4

Q ss_pred             ccceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCC
Q 020314            4 KAVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGS   83 (327)
Q Consensus         4 ~~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   83 (327)
                      ..||||+++++++++   |++++.+.|+|.++||||||.++|||++|+++++|.++    ..+|.++|||++|+|+++|+
T Consensus         6 ~~~~KAav~~~~g~~---l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~----~~~P~i~GHE~~G~Vv~~G~   78 (198)
T d1p0fa1           6 DITCKAAVAWEPHKP---LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP----SKFPVILGHEAVGVVESIGA   78 (198)
T ss_dssp             CEEEEEEEBSSTTSC---CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCCEEEEEEEECT
T ss_pred             ceEEEEEEEccCCCC---CEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc----cccccccceeeeeeeeecCc
Confidence            579999999998876   99999999999999999999999999999999999874    47899999999999999999


Q ss_pred             CCCCCCCCCEEEEEc------------------------------------------------cCcccceeEeecCCcee
Q 020314           84 EVKNFKVGDKVVAVL------------------------------------------------SGGGLAEFAVAKESLTV  115 (327)
Q Consensus        84 ~~~~~~~Gd~V~~~~------------------------------------------------~~g~~a~~~~~~~~~~~  115 (327)
                      +++++++||||+..+                                                ..|+|+||..+++..++
T Consensus        79 ~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~  158 (198)
T d1p0fa1          79 GVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVA  158 (198)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEE
T ss_pred             ccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEE
Confidence            999999999998744                                                13789999999999999


Q ss_pred             eCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHH
Q 020314          116 ARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGL  168 (327)
Q Consensus       116 ~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~  168 (327)
                      ++|++++.+.++...+.+.+.               ++++.|||.| +|++|+
T Consensus       159 kip~~~~~~~~~~~~~~~~~v---------------~~~~~vlv~G-~G~iGl  195 (198)
T d1p0fa1         159 KIDPKINVNFLVSTKLTLDQI---------------NKAFELLSSG-QGVRSI  195 (198)
T ss_dssp             EECTTSCGGGGEEEEECGGGH---------------HHHHHHTTTS-SCSEEE
T ss_pred             ECCCCCCHHHHHHhhcchhhc---------------CCCCEEEEEC-CCcceE
Confidence            999999988776655443222               2334466777 677664

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=1.5e-26  Score=175.90  Aligned_cols=129  Identities=25%  Similarity=0.237  Sum_probs=113.4

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||+++.++++ ++.+++++.+.|+++++||+|||.++|||+.|++...|.++..  ..+|.++|+|++|+|+++|.  +
T Consensus         1 MkA~v~~~~~~-~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~--~~~p~v~G~e~~G~V~~~~~--~   75 (146)
T d1o89a1           1 LQALLLEQQDG-KTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKII--RNFPMIPGIDFAGTVRTSED--P   75 (146)
T ss_dssp             CEEEEEECC----CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCC--CSSSBCCCSEEEEEEEEECS--T
T ss_pred             CeEEEEEcCCC-ceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccc--cccceeccccccccceeecc--C
Confidence            89999999987 6788999999999999999999999999999999999987532  36789999999999999766  4


Q ss_pred             CCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHH
Q 020314           87 NFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQAL  140 (327)
Q Consensus        87 ~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al  140 (327)
                      .+++||+|+...      .+|+|+||+++++++++++|+++|+++||++++++.||+..+
T Consensus        76 ~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          76 RFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             TCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             CccceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            799999998755      479999999999999999999999999999998888886554

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.94  E-value=1.8e-28  Score=190.78  Aligned_cols=151  Identities=26%  Similarity=0.309  Sum_probs=130.9

Q ss_pred             cceEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCC
Q 020314            5 AVMHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSE   84 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   84 (327)
                      ++|||+++.++++ ...+++++.+.|++.+|||||||+++|||++|++.+.|.++.  ....|.++|+|++|+|++  +.
T Consensus         2 ~~~ka~~~~~~g~-~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~--~~~~~~~~g~e~~G~v~~--~~   76 (162)
T d1tt7a1           2 TLFQALQAEKNAD-DVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNI--VREYPLILGIDAAGTVVS--SN   76 (162)
T ss_dssp             CEEEEEEECCGGG-SCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTT--CSSCSEECCSEEEEEEEE--CS
T ss_pred             CcEEEEEEEecCC-CeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccc--cccceeeeeeeccccccc--cc
Confidence            5799999999886 678999999999999999999999999999999999998753  236789999999999999  66


Q ss_pred             CCCCCCCCEEEEEc------cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEE
Q 020314           85 VKNFKVGDKVVAVL------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNIL  158 (327)
Q Consensus        85 ~~~~~~Gd~V~~~~------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vl  158 (327)
                      ++++++||+|+...      .+|+|+||+.++++.++++|+++|+++||.+++.++|+|+++.. .+.     +.+++||
T Consensus        77 ~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~-----~~~~~Vl  150 (162)
T d1tt7a1          77 DPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE-ETP-----GALKDIL  150 (162)
T ss_dssp             STTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST-THH-----HHHHHTT
T ss_pred             ccccccceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh-cCC-----CCCCEEE
Confidence            78899999998865      56899999999999999999999999999999999999976532 222     4567789


Q ss_pred             EEcCCChH
Q 020314          159 ITAASGAV  166 (327)
Q Consensus       159 V~g~~g~~  166 (327)
                      |+|++|++
T Consensus       151 i~ga~G~v  158 (162)
T d1tt7a1         151 QNRIQGRV  158 (162)
T ss_dssp             TTCCSSEE
T ss_pred             EECCcceE
Confidence            98877753

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=3e-27  Score=188.35  Aligned_cols=169  Identities=23%  Similarity=0.278  Sum_probs=135.6

Q ss_pred             hhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEE
Q 020314          124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVL  202 (327)
Q Consensus       124 ~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~  202 (327)
                      +|||+++++++|||+++.+..++     ++|++|||+||+|++|++++|+|+++|++++++++ +++.+.++++|++.++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~-----~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi   75 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRL-----SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVG   75 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCC-----CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEE
T ss_pred             CchhhhhHHHHHHHHHHHHHhCC-----CCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccc
Confidence            47999999999999999888888     89999999999999999999999999999999985 4788999999999999


Q ss_pred             eCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC----
Q 020314          203 DYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS----  276 (327)
Q Consensus       203 ~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----  276 (327)
                      ++++.+  ..+.+.++++++|++|||+|++.++.++++++++|+++.+|................++..+.++...    
T Consensus        76 ~~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (183)
T d1pqwa_          76 DSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK  155 (183)
T ss_dssp             ETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH
T ss_pred             cCCccCHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec
Confidence            988877  34666778899999999999988999999999999999998554322211111122344444432211    


Q ss_pred             ----CCHHHHHHHHHHHHCCceeEe
Q 020314          277 ----PKGENLDFLVKLVKEGKLKTV  297 (327)
Q Consensus       277 ----~~~~~~~~~~~~~~~g~l~~~  297 (327)
                          ..++.++++++++++|+|+++
T Consensus       156 ~~~~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         156 LQPARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             cCHHHHHHHHHHHHHHHHCCCCcee
Confidence                124668889999999999874

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.93  E-value=1.6e-28  Score=194.39  Aligned_cols=161  Identities=19%  Similarity=0.193  Sum_probs=132.0

Q ss_pred             cceEEEEEeccCCCccceEE--eeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCC-------CCCCCCeeecccce
Q 020314            5 AVMHAVQYDSYGGGVAGLKH--VEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPF-------LPRKFPFIPASDVA   75 (327)
Q Consensus         5 ~~~~a~~~~~~g~~~~~l~~--~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~-------~~~~~p~~~G~e~~   75 (327)
                      .||||+++.++|+|.+.+++  .+.+.|+|.++||+|||+++|||++|+++++|.++..       ....+|.++|+|++
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            57999999999986555555  4667777899999999999999999999999886431       12257889999999


Q ss_pred             EEEEecCCCCCCCCCCCEEEEEc-cCcccceeEeecCCceeeCCCCCChhhhcccCchHHHHHHHHHH-hhCCccCCCCC
Q 020314           76 GEVIGLGSEVKNFKVGDKVVAVL-SGGGLAEFAVAKESLTVARPQEVSAAEGAGIPCAGLTAHQALTQ-SLGVKLDGSGQ  153 (327)
Q Consensus        76 G~V~~vG~~~~~~~~Gd~V~~~~-~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~al~~-~~~~~~~~~~~  153 (327)
                      |+|+++|.++..+++||||.... .+|+|+||..+++++++++|+.++.+.++  ....+|||+++.. ..++     ++
T Consensus        82 g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~iP~~~~~~~a~--~~~~~ta~~~l~~~~~~~-----~~  154 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANG--KPNGLTDAKSIETLYDGT-----KP  154 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTT--CSCCCCCCCCEEEECCSS-----SC
T ss_pred             cccccccccccccccccceeccccccccccceeeehhhhccCCCccchhhhhc--cchHHHHHHHHHHHhcCC-----CC
Confidence            99999999999999999998755 45899999999999999999987544443  4455688888743 3566     89


Q ss_pred             CCeEEEEc-CCChHHHHHHH
Q 020314          154 QKNILITA-ASGAVGLYAVQ  172 (327)
Q Consensus       154 ~~~vlV~g-~~g~~G~~~~~  172 (327)
                      |++|||+| |+|++|++++|
T Consensus       155 g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         155 LHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             HHHHHHHHHHTGGGSCEEEE
T ss_pred             CCEEEEECccchhhhheEEe
Confidence            99999998 55789988765

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.93  E-value=8.4e-26  Score=177.25  Aligned_cols=119  Identities=22%  Similarity=0.242  Sum_probs=103.5

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||++++++++    +++++.+.|.|.++||+||+.++|||++|++.+.+...   ...+|+++|||++|+|+++|++++
T Consensus         1 MKa~v~~~~~~----l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~---~~~~P~i~GhE~~G~V~~vG~~v~   73 (177)
T d1jqba1           1 MKGFAMLGINK----LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGAL---GDRKNMILGHEAVGEVVEVGSEVK   73 (177)
T ss_dssp             CEEEEEEETTE----EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTT---CCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CeEEEEEeCCC----eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCC---CCCCCccCcceeeEEeeecccccc
Confidence            89999998876    99999999999999999999999999999987765432   236799999999999999999999


Q ss_pred             CCCCCCEEEEEc------------------------------cCcccceeEeecC--CceeeCCCCCChhhhcccCch
Q 020314           87 NFKVGDKVVAVL------------------------------SGGGLAEFAVAKE--SLTVARPQEVSAAEGAGIPCA  132 (327)
Q Consensus        87 ~~~~Gd~V~~~~------------------------------~~g~~a~~~~~~~--~~~~~ip~~~~~~~aa~~~~~  132 (327)
                      +|++||||+..+                              .+|+|+||++++.  .+++++|+++++++++.....
T Consensus        74 ~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~  151 (177)
T d1jqba1          74 DFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYH  151 (177)
T ss_dssp             SCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEE
T ss_pred             eecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHH
Confidence            999999998533                              4589999999986  378999999999887665443

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=2.5e-25  Score=174.97  Aligned_cols=130  Identities=16%  Similarity=0.204  Sum_probs=110.3

Q ss_pred             eEEEEEeccCCCccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEecCCCCC
Q 020314            7 MHAVQYDSYGGGVAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGLGSEVK   86 (327)
Q Consensus         7 ~~a~~~~~~g~~~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~   86 (327)
                      |||++..+++++   |++++.+.|+|.++|||||+.++|||++|++.+.|.++.   ..+|+++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~p---l~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~---~~~P~i~GhE~~G~V~~vG~~V~   74 (179)
T d1uufa1           1 IKAVGAYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG---TVYPCVPGHEIVGRVVAVGDQVE   74 (179)
T ss_dssp             CEEEEBSSTTSC---CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC---CCSSBCCCCCEEEEEEEECTTCC
T ss_pred             CeEEEEccCCCC---CEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeecc---ccccccccccccccchhhccccc
Confidence            799999998887   999999999999999999999999999999999997652   37899999999999999999999


Q ss_pred             CCCCCCEEEEEc------------------------------------cCcccceeEeecCCceeeCCCCCChhhhcccC
Q 020314           87 NFKVGDKVVAVL------------------------------------SGGGLAEFAVAKESLTVARPQEVSAAEGAGIP  130 (327)
Q Consensus        87 ~~~~Gd~V~~~~------------------------------------~~g~~a~~~~~~~~~~~~ip~~~~~~~aa~~~  130 (327)
                      ++++||||....                                    .+|+|+||+++++.+++++|+.....   .+.
T Consensus        75 ~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~---~~a  151 (179)
T d1uufa1          75 KYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEM---IRA  151 (179)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEE---ECG
T ss_pred             cCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcCh---hHh
Confidence            999999996432                                    24899999999999999999664322   223


Q ss_pred             chHHHHHHHHHHhhCC
Q 020314          131 CAGLTAHQALTQSLGV  146 (327)
Q Consensus       131 ~~~~ta~~al~~~~~~  146 (327)
                      .++.++++++. .+++
T Consensus       152 ~~l~~a~~a~~-~a~v  166 (179)
T d1uufa1         152 DQINEAYERML-RGDV  166 (179)
T ss_dssp             GGHHHHHHHHH-TTCS
T ss_pred             chhHHHHHHHH-HhCc
Confidence            45678888884 4454

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=1e-25  Score=177.13  Aligned_cols=165  Identities=25%  Similarity=0.338  Sum_probs=141.1

Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCC
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGA  198 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~  198 (327)
                      +|+.+||.+++++.|||+++ +..++     +++++|+|+|++|++|+++++++++.|+ +|+++.. ++|+++++++|+
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~-----~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga   74 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASL-----DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA   74 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTC-----CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCC-----CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCC
Confidence            57899999999999999999 66777     8999999999889999999999999996 7777774 578999999999


Q ss_pred             CEEEeCCCCC--cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe
Q 020314          199 DEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV  275 (327)
Q Consensus       199 ~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (327)
                      +.++++++.+  .+..+.+.++++|++|||+|++. ++.++++++++|+++.+|..... ..+....+.++++++.+ +.
T Consensus        75 ~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~i~i~G-s~  152 (170)
T d1jvba2          75 DYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGAD-LHYHAPLITLSEIQFVG-SL  152 (170)
T ss_dssp             SEEEETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCC-CCCCHHHHHHHTCEEEE-CC
T ss_pred             ceeeccCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCc-cccCHHHHHhCCcEEEE-Ee
Confidence            9999988776  34566677888999999999865 89999999999999999865432 45556677888999988 44


Q ss_pred             CCCHHHHHHHHHHHHCCc
Q 020314          276 SPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       276 ~~~~~~~~~~~~~~~~g~  293 (327)
                      ...+++++++++++++|+
T Consensus       153 ~~~~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         153 VGNQSDFLGIMRLAEAGK  170 (170)
T ss_dssp             SCCHHHHHHHHHHHHTTS
T ss_pred             cCCHHHHHHHHHHHHcCC
Confidence            567889999999999986

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=1.2e-25  Score=176.34  Aligned_cols=158  Identities=22%  Similarity=0.231  Sum_probs=123.4

Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCC
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGAD  199 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~  199 (327)
                      +++++||+++++++|||+++. ..++     ++|++|||+|++|++|++++|+|++.|++|+++++ +++++.++++|++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~-----~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~   74 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQA-----RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAE   74 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTC-----CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCC-----CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccc
Confidence            589999999999999999995 5788     89999999999999999999999999999999985 5788999999999


Q ss_pred             EEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe---C
Q 020314          200 EVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV---S  276 (327)
Q Consensus       200 ~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~  276 (327)
                      +++|+.+..   .+.+.++|+|+|||++| +.+..++++++++|+++.+|...+....+....+..+++++.+++.   .
T Consensus        75 ~~i~~~~~~---~~~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~~~  150 (171)
T d1iz0a2          75 EAATYAEVP---ERAKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLL  150 (171)
T ss_dssp             EEEEGGGHH---HHHHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHT
T ss_pred             eeeehhhhh---hhhhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcChh
Confidence            999886432   22345678999999987 5688999999999999999976655555666677788888887532   1


Q ss_pred             CCHHHHHHHHHH
Q 020314          277 PKGENLDFLVKL  288 (327)
Q Consensus       277 ~~~~~~~~~~~~  288 (327)
                      ..++.+++.+..
T Consensus       151 ~~~~~~~~~~~~  162 (171)
T d1iz0a2         151 REGALVEEALGF  162 (171)
T ss_dssp             TCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHH
Confidence            234444444443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=9.1e-25  Score=171.04  Aligned_cols=163  Identities=19%  Similarity=0.277  Sum_probs=133.9

Q ss_pred             ChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCE
Q 020314          122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADE  200 (327)
Q Consensus       122 ~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~  200 (327)
                      +.+.||.+.|++.|+|+++ +..++     ++|++|+|+| +|++|++++|+|+++|++|++++ +++|+++++++|+++
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~-----~~g~~vlI~G-aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~   74 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGC-----GPGKKVGIVG-LGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADH   74 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTC-----STTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSE
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCc-----CCCCEEEEEC-CCCcchhHHHHhhhccccccccccchhHHHHhhccCCcE
Confidence            4577899999999999999 46778     8999999999 59999999999999999999988 558999999999999


Q ss_pred             EEeCCCCCcccccCCCCCcccEEEeCCCCCc---ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCC
Q 020314          201 VLDYKTPDGAALKSPSGRKYDAVINCVTGIP---WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP  277 (327)
Q Consensus       201 v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (327)
                      ++++.+.......  ..+++|.++||+++..   +..++++++++|+++.+|..... ..++...+.++++++.+ +...
T Consensus        75 ~i~~~~~~~~~~~--~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~G-s~~g  150 (168)
T d1piwa2          75 YIATLEEGDWGEK--YFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQH-EMLSLKPYGLKAVSISY-SALG  150 (168)
T ss_dssp             EEEGGGTSCHHHH--SCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSS-CCEEECGGGCBSCEEEE-CCCC
T ss_pred             EeeccchHHHHHh--hhcccceEEEEecCCccchHHHHHHHhhccceEEEecccccc-ccccHHHHHhCCcEEEE-EeeC
Confidence            9987654321111  1257999999988532   77899999999999999965443 34556677888888887 5566


Q ss_pred             CHHHHHHHHHHHHCCcee
Q 020314          278 KGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       278 ~~~~~~~~~~~~~~g~l~  295 (327)
                      ++++++++++++++|+|+
T Consensus       151 ~~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         151 SIKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             CHHHHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHHHhCCCC
Confidence            789999999999999874

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=4.7e-26  Score=180.69  Aligned_cols=127  Identities=27%  Similarity=0.352  Sum_probs=116.0

Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCC
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGAD  199 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~  199 (327)
                      +|+++||+++++++|||++|.+..++     ++|++|||+||+|++|++++|+|+..|++|+++++ +++.++++++|++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l-----~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~   75 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEI-----KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW   75 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCC-----CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCC-----CCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCe
Confidence            58999999999999999999888888     89999999999999999999999999999999985 5789999999999


Q ss_pred             EEEeCCCCC--cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCc
Q 020314          200 EVLDYKTPD--GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       200 ~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      +++|+++++  .++.+.++++++|+++|++|++.+..++.+++++|+++.++...
T Consensus        76 ~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~  130 (179)
T d1qora2          76 QVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS  130 (179)
T ss_dssp             EEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTT
T ss_pred             EEEECCCCCHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeeccccc
Confidence            999998877  34666788899999999999999999999999999999987543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.92  E-value=2.7e-25  Score=176.53  Aligned_cols=161  Identities=29%  Similarity=0.358  Sum_probs=132.5

Q ss_pred             cccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCC
Q 020314          127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYK  205 (327)
Q Consensus       127 a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~  205 (327)
                      +++.++++|||++|.+..++     ++|++|||+||+|++|++++|+|+..|++|++++++ ++.++++++|++++++++
T Consensus         8 ~~lg~~glTA~~al~~~~~v-----~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~   82 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGV-----KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYK   82 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCC-----CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHhhHHHHHHHHHHHHhCC-----CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccc
Confidence            56788999999999999999     999999999999999999999999999999999955 688999999999999988


Q ss_pred             CCCc--ccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCch------hHHHHhhhhccccceeeEEEEe-C
Q 020314          206 TPDG--AALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPR------VLLTFAWKKLTFSKKQLVPFSV-S  276 (327)
Q Consensus       206 ~~~~--~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~-~  276 (327)
                      +.+.  .+.+.++++++|+|||++|++.++.++++++++|+++.+|....      ....+....+.++++++.+++. .
T Consensus        83 ~~~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~  162 (182)
T d1v3va2          83 TVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  162 (182)
T ss_dssp             SCSCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             cccHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence            7762  35566778899999999998889999999999999999985332      1222344566778888887543 2


Q ss_pred             CC----HHHHHHHHHHHHCC
Q 020314          277 PK----GENLDFLVKLVKEG  292 (327)
Q Consensus       277 ~~----~~~~~~~~~~~~~g  292 (327)
                      ..    .+.++++++++++|
T Consensus       163 ~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         163 WQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             CCHHHHHHHHHHHHHHHHTT
T ss_pred             cChHHHHHHHHHHHHHHhCc
Confidence            22    34567888888775

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=9.3e-25  Score=171.05  Aligned_cols=164  Identities=21%  Similarity=0.276  Sum_probs=133.5

Q ss_pred             CCChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCC
Q 020314          120 EVSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGA  198 (327)
Q Consensus       120 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~  198 (327)
                      +.+++.+|.+.|++.|+|+++ +..++     ++|++|+|.| +|++|++++|+|+++|++++++++ ++++++++++|+
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al-~~~~~-----~~G~~VlI~G-aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGa   75 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPL-RHWQA-----GPGKKVGVVG-IGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA   75 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHH-HHTTC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC
T ss_pred             cccHHHHHHHHhHHHHHHHHH-HHhCC-----CCCCEEEEec-cchHHHHHHHHhhcccccchhhccchhHHHHHhccCC
Confidence            456788888999999999999 67888     9999999998 699999999999999998888774 578899999999


Q ss_pred             CEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCC
Q 020314          199 DEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP  277 (327)
Q Consensus       199 ~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (327)
                      +.++++.+.+...   ...+++|++||++|++. +..++++++++|+++.+|........+....+.++++++.+ +...
T Consensus        76 d~~i~~~~~~~~~---~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~G-s~~~  151 (168)
T d1uufa2          76 DEVVNSRNADEMA---AHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAG-SMIG  151 (168)
T ss_dssp             SEEEETTCHHHHH---TTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEE-CCSC
T ss_pred             cEEEECchhhHHH---HhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEE-Eeec
Confidence            9999987654221   22368999999999765 99999999999999999976665556666777789999988 5566


Q ss_pred             CHHHHHHHHHHHHCCce
Q 020314          278 KGENLDFLVKLVKEGKL  294 (327)
Q Consensus       278 ~~~~~~~~~~~~~~g~l  294 (327)
                      ...+++++++++++++|
T Consensus       152 ~~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         152 GIPETQEMLDFCAEHGI  168 (168)
T ss_dssp             CHHHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHHHHcCC
Confidence            78899999999987654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.91  E-value=7.6e-25  Score=172.00  Aligned_cols=166  Identities=18%  Similarity=0.163  Sum_probs=131.6

Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCC
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGA  198 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~  198 (327)
                      +++++|+.+++++.|+|+++ +.+++     ++|++|+|+| +|++|++++|+|+.+|+ +|+++++ ++|+++++++|+
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~-----~~g~~VlI~G-aG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa   73 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADI-----EMGSSVVVIG-IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGA   73 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTC-----CTTCCEEEEC-CSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCC-----CCCCEEEEEc-CCcchhhhhhhhhcccccccccccchhhhHHHHHhhCc
Confidence            57899999999999999998 67888     9999999998 69999999999999998 7888885 478999999999


Q ss_pred             CEEEeCCCCC--cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchh-HHHH--hhhhccccceeeEE
Q 020314          199 DEVLDYKTPD--GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRV-LLTF--AWKKLTFSKKQLVP  272 (327)
Q Consensus       199 ~~v~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~-~~~~--~~~~~~~~~~~~~~  272 (327)
                      ++++|+++++  ..+.+.++++|+|++|||+|++. ++.++++++++|+++.+|..... ...+  .......+.+++.+
T Consensus        74 ~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g  153 (174)
T d1jqba2          74 TDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKG  153 (174)
T ss_dssp             SEEECGGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEE
T ss_pred             cccccccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEE
Confidence            9999988766  34566778899999999999766 89999999999999999854321 1111  11122335566666


Q ss_pred             EEeCCCHHHHHHHHHHHHCCc
Q 020314          273 FSVSPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~g~  293 (327)
                      ......+..++.++++++.|+
T Consensus       154 ~~~~~~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         154 GLCPGGRLRAERLRDMVVYNR  174 (174)
T ss_dssp             BCCCCHHHHHHHHHHHHHTTS
T ss_pred             ecCCCCcccHHHHHHHHHcCC
Confidence            333344566788889998875

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.91  E-value=8.9e-26  Score=180.27  Aligned_cols=168  Identities=24%  Similarity=0.309  Sum_probs=132.9

Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEE-cCCChHHHHHHHHHHhCCCeEEEEecC-C----cHHHHH
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILIT-AASGAVGLYAVQLAKLGNTHVTATCGA-R----NIELVK  194 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~-g~~g~~G~~~~~la~~~g~~v~~~~~~-~----~~~~~~  194 (327)
                      +|+++||+++++++|||++|.+..++     ++|++++|+ ||+|++|++++|+||++|++|+++++. +    +.+.++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~-----~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~   75 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKL-----TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK   75 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCC-----CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCC-----CCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhh
Confidence            58999999999999999999888888     899988886 788999999999999999999999843 3    345678


Q ss_pred             hcCCCEEEeCCCCCcc-----c--ccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccc
Q 020314          195 SLGADEVLDYKTPDGA-----A--LKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSK  267 (327)
Q Consensus       195 ~lg~~~v~~~~~~~~~-----~--~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  267 (327)
                      ++|+++++++++.+..     +  .....++++|++||++|++.+..++++|+++|+++.+|..++....++...+.+++
T Consensus        76 ~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~  155 (189)
T d1gu7a2          76 ELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKN  155 (189)
T ss_dssp             HHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSC
T ss_pred             hccccEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCC
Confidence            9999999987643311     1  11234678999999999998999999999999999999765544555556667788


Q ss_pred             eeeEEEEeC----CC----HHHHHHHHHHHHCCc
Q 020314          268 KQLVPFSVS----PK----GENLDFLVKLVKEGK  293 (327)
Q Consensus       268 ~~~~~~~~~----~~----~~~~~~~~~~~~~g~  293 (327)
                      +++.+++..    ..    .+.++++++++++|+
T Consensus       156 ~~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         156 FTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             CEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             cEEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            888875321    12    355778888887764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.91  E-value=2.1e-24  Score=169.73  Aligned_cols=163  Identities=25%  Similarity=0.265  Sum_probs=137.0

Q ss_pred             ChhhhcccCchHHHHHHHHHHhhC-CccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCC
Q 020314          122 SAAEGAGIPCAGLTAHQALTQSLG-VKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGA  198 (327)
Q Consensus       122 ~~~~aa~~~~~~~ta~~al~~~~~-~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~  198 (327)
                      .+.++|+++++++|||+++.+... +     ++|++|+|.| +|++|++++|+++++|+ +|+++++ ++|+++++++|+
T Consensus         5 ~l~eaA~l~~~~~Ta~~al~~~~~~~-----~~g~~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga   78 (172)
T d1h2ba2           5 KLVEMAPLADAGITAYRAVKKAARTL-----YPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGA   78 (172)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTC-----CTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTC
T ss_pred             hHHHHhHHHhHHHHHHHHHHHhhhcc-----CCCCEEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHHHhhccc
Confidence            367899999999999999977653 6     8999999998 69999999999999998 5666664 478999999999


Q ss_pred             CEEEeCCCCC-cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeC
Q 020314          199 DEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVS  276 (327)
Q Consensus       199 ~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (327)
                      +.++++++++ ....+.+.+.++|++|||+|+.. ++.++++++++|+++.+|....  .+++...+.++++++.+ +..
T Consensus        79 ~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~--~~~~~~~l~~k~~~i~G-s~~  155 (172)
T d1h2ba2          79 DHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGGE--LRFPTIRVISSEVSFEG-SLV  155 (172)
T ss_dssp             SEEEETTSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSSC--CCCCHHHHHHTTCEEEE-CCS
T ss_pred             ceeecCcccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCccc--ccCCHHHHHhCCcEEEE-EEe
Confidence            9999987665 34566678889999999999875 8999999999999999996433  34556677888999998 455


Q ss_pred             CCHHHHHHHHHHHHCCc
Q 020314          277 PKGENLDFLVKLVKEGK  293 (327)
Q Consensus       277 ~~~~~~~~~~~~~~~g~  293 (327)
                      ..+++++++++++++|+
T Consensus       156 ~~~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         156 GNYVELHELVTLALQGK  172 (172)
T ss_dssp             CCHHHHHHHHHHHHTTS
T ss_pred             cCHHHHHHHHHHHHcCC
Confidence            67889999999999986

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=1.6e-24  Score=169.48  Aligned_cols=162  Identities=21%  Similarity=0.229  Sum_probs=132.1

Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCC
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGAD  199 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~  199 (327)
                      +++++||.+++++.|||+++ +.+++     ++|++|+|.| +|++|++++|+|+.+|++|+++++. +|++.++++|++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~-----~~g~~VlV~G-aG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~   73 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNA-----RPGQWVAISG-IGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGAS   73 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCC-----CCCCEEEEee-ccccHHHHHHHHHHcCCccceecchhhHHHhhhccCcc
Confidence            57899999999999999999 55788     8999999998 6999999999999999999999855 788999999999


Q ss_pred             EEEeCCCCCc-ccccCCCCCcccEEEeCCC-CCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCC
Q 020314          200 EVLDYKTPDG-AALKSPSGRKYDAVINCVT-GIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP  277 (327)
Q Consensus       200 ~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (327)
                      .++|+++.+. +...... .+.|.++++++ ++.++.++++++++|+++.+|...+. ..++...+.++++++.+ +...
T Consensus        74 ~~i~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~G-s~~~  150 (166)
T d1llua2          74 LTVNARQEDPVEAIQRDI-GGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGD-FPTPIFDVVLKGLHIAG-SIVG  150 (166)
T ss_dssp             EEEETTTSCHHHHHHHHH-SSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSE-EEEEHHHHHHTTCEEEE-CCSC
T ss_pred             ccccccchhHHHHHHHhh-cCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCC-ccCCHHHHHhCCcEEEE-Eeec
Confidence            9999887762 2222222 34555555555 45589999999999999999965443 34556677889999988 4556


Q ss_pred             CHHHHHHHHHHHHCC
Q 020314          278 KGENLDFLVKLVKEG  292 (327)
Q Consensus       278 ~~~~~~~~~~~~~~g  292 (327)
                      .+++++++++++++|
T Consensus       151 ~~~d~~e~l~l~~~G  165 (166)
T d1llua2         151 TRADLQEALDFAGEG  165 (166)
T ss_dssp             CHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHCc
Confidence            788999999999987

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.90  E-value=1.6e-24  Score=170.52  Aligned_cols=165  Identities=22%  Similarity=0.222  Sum_probs=134.2

Q ss_pred             ChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEE-ec-CCcHHHHHhcCCC
Q 020314          122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTAT-CG-ARNIELVKSLGAD  199 (327)
Q Consensus       122 ~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~-~~-~~~~~~~~~lg~~  199 (327)
                      +++.|+.++|++.|||+++.+..++     ++|++|+|+| +|++|++++|+|+.+|++++.+ ++ ++|+++++++|++
T Consensus         2 P~e~aapl~ca~~Ta~~a~~~~~~~-----~~g~~VlI~G-~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~   75 (174)
T d1f8fa2           2 PIELLGPLGCGIQTGAGACINALKV-----TPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT   75 (174)
T ss_dssp             CGGGTGGGGTHHHHHHHHHHTTTCC-----CTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS
T ss_pred             CHHHHHHHhhHHHHHHHHHHHhhCC-----CCCCEEEEeC-CCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCe
Confidence            4678999999999999998888888     9999999999 5999999999999999965544 43 4689999999999


Q ss_pred             EEEeCCCCC-cc-cccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc-hhHHHHhhhhccccceeeEEEEe
Q 020314          200 EVLDYKTPD-GA-ALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKLTFSKKQLVPFSV  275 (327)
Q Consensus       200 ~v~~~~~~~-~~-~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~  275 (327)
                      +++|+++++ .+ +.+.++ +++|++|||+|++. ++.++++++++|+++.+|... .....++...+.++++++.+...
T Consensus        76 ~~i~~~~~~~~~~i~~~t~-gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~  154 (174)
T d1f8fa2          76 HVINSKTQDPVAAIKEITD-GGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVE  154 (174)
T ss_dssp             EEEETTTSCHHHHHHHHTT-SCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSG
T ss_pred             EEEeCCCcCHHHHHHHHcC-CCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEe
Confidence            999988766 23 334444 48999999999765 889999999999999998643 33345566677888999988532


Q ss_pred             --CCCHHHHHHHHHHHHCCc
Q 020314          276 --SPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       276 --~~~~~~~~~~~~~~~~g~  293 (327)
                        ...+++++++++++++|+
T Consensus       155 g~~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         155 GSGSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             GGSCHHHHHHHHHHHHHTTS
T ss_pred             cCCChHHHHHHHHHHHHcCC
Confidence              223678999999999986

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=6.6e-24  Score=168.42  Aligned_cols=163  Identities=18%  Similarity=0.198  Sum_probs=133.7

Q ss_pred             hhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCE
Q 020314          123 AAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADE  200 (327)
Q Consensus       123 ~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~  200 (327)
                      ++.+|.+.|++.|||+++.+..++     ++|++|||+| +|++|++++|+|+++|+ +|+++++ ++|+++++++|++.
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~-----~~G~~VlV~G-aG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~   76 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPES-----FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADL   76 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSC-----CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSE
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCC-----CCCCEEEEEC-CCccchhheecccccccccccccccccccccccccccceE
Confidence            567888899999999999888888     8999999999 59999999999999998 7888885 57899999999999


Q ss_pred             EEeCCCCCc-----ccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc-hhHHHH-hhhhccccceeeEE
Q 020314          201 VLDYKTPDG-----AALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP-RVLLTF-AWKKLTFSKKQLVP  272 (327)
Q Consensus       201 v~~~~~~~~-----~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~-~~~~~~~~~~~~~~  272 (327)
                      ++|+.+.+.     .+.+.+++.++|+||||+|++. ++.++++++++|+++.+|... ....++ ....+.++++++.+
T Consensus        77 vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G  156 (182)
T d1vj0a2          77 TLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKG  156 (182)
T ss_dssp             EEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEE
T ss_pred             EEeccccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEE
Confidence            999887662     2455577889999999999865 899999999999999998542 222222 23446678888888


Q ss_pred             EEeCCCHHHHHHHHHHHHCC
Q 020314          273 FSVSPKGENLDFLVKLVKEG  292 (327)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~g  292 (327)
                       +.....+++++++++++++
T Consensus       157 -~~~~~~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         157 -IWVSDTSHFVKTVSITSRN  175 (182)
T ss_dssp             -CCCCCHHHHHHHHHHHHTC
T ss_pred             -EEeCCHHHHHHHHHHHHHC
Confidence             4455788899999988875

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.90  E-value=6.8e-24  Score=166.57  Aligned_cols=164  Identities=19%  Similarity=0.149  Sum_probs=128.6

Q ss_pred             hhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCE
Q 020314          123 AAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADE  200 (327)
Q Consensus       123 ~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~  200 (327)
                      |.+||.+.|++.|+|+++.+.+++     ++|++|+|+| +|++|++++|+|+++|+ +|+++++ ++|+++++++|+++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~-----~~G~~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~   75 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKV-----TPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE   75 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCC-----CTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCC-----CCCCEEEEEC-CCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcE
Confidence            567999999999999999888888     9999999999 69999999999999998 7777774 57899999999999


Q ss_pred             EEeCCCCC---cccccCCCCCcccEEEeCCCCCc-ccccccccCC-CcEEEeecCCchh-HHHHhhhhccccceeeEEEE
Q 020314          201 VLDYKTPD---GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGT-TGKVIDFNPSPRV-LLTFAWKKLTFSKKQLVPFS  274 (327)
Q Consensus       201 v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~-~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~  274 (327)
                      ++|+++.+   .+..+.+.++++|++||++|+.. +..++..+++ +|+++.+|..... ..++.. ....+++++.+..
T Consensus        76 ~i~~~~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~-~~~~~~~~i~Gs~  154 (174)
T d1p0fa2          76 CLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDP-LLLLTGRSLKGSV  154 (174)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECT-HHHHTTCEEEECS
T ss_pred             EEcCCCchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCH-HHHhCCCEEEEEE
Confidence            99987655   23445566679999999999865 7777777766 5999999864322 222221 2234567787743


Q ss_pred             e-CCCHHHHHHHHHHHHCCc
Q 020314          275 V-SPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       275 ~-~~~~~~~~~~~~~~~~g~  293 (327)
                      . ....++++++++++++|+
T Consensus       155 ~G~~~~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         155 FGGFKGEEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGGCCGGGHHHHHHHHHTTS
T ss_pred             eCCCCHHHHHHHHHHHHcCC
Confidence            2 335678999999999885

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=4.4e-24  Score=165.75  Aligned_cols=154  Identities=20%  Similarity=0.207  Sum_probs=124.5

Q ss_pred             hHHHHHHH---HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCC
Q 020314          132 AGLTAHQA---LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTP  207 (327)
Q Consensus       132 ~~~ta~~a---l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~  207 (327)
                      ++.|||.+   |.+....     +++++|||+||+|++|.+++|+||++|++|++++++ +|.++++++|++.++++++.
T Consensus         4 aGlTA~~a~~~L~~~g~~-----~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~   78 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLS-----PEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDV   78 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCC-----GGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHH
T ss_pred             hHHHHHHHHHHHHHhcCC-----CCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccch
Confidence            45677755   4344444     678889999999999999999999999999999964 78999999999999988765


Q ss_pred             CcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCC-CHHHHHHHH
Q 020314          208 DGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP-KGENLDFLV  286 (327)
Q Consensus       208 ~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  286 (327)
                      ..+..+.+.++++|++||++|++.+..++++|+++|+++.+|...+...+++...+.++++++.++.... ..+..+.+.
T Consensus        79 ~~~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~~~~~~~~~~~~  158 (167)
T d1tt7a2          79 YDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVW  158 (167)
T ss_dssp             CSSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHH
T ss_pred             hchhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecCCCCHHHHHHHH
Confidence            5566677788899999999999999999999999999999998776666667777788999998854433 344455555


Q ss_pred             HHHH
Q 020314          287 KLVK  290 (327)
Q Consensus       287 ~~~~  290 (327)
                      +.+.
T Consensus       159 ~~l~  162 (167)
T d1tt7a2         159 ERMS  162 (167)
T ss_dssp             HHTT
T ss_pred             HHHH
Confidence            5543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.89  E-value=1.1e-23  Score=165.18  Aligned_cols=164  Identities=15%  Similarity=0.103  Sum_probs=128.7

Q ss_pred             ChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCC
Q 020314          122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGAD  199 (327)
Q Consensus       122 ~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~  199 (327)
                      ++++||.+.|++.|+|+++.+.+++     ++|++|+|+| +|++|++++|+++++|+ +|++++. ++|++.++++|++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v-----~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~   75 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKV-----TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT   75 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCC-----CCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCC
Confidence            5788999999999999999888888     9999999998 79999999999999999 5666664 5799999999999


Q ss_pred             EEEeCCCCC---cccccCCCCCcccEEEeCCCCCc-ccccccccCCC-cEEEeecCCchhHHHHhhhhccccceeeEEEE
Q 020314          200 EVLDYKTPD---GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTT-GKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFS  274 (327)
Q Consensus       200 ~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  274 (327)
                      .++++...+   ....+.+.++|+|++|||+|.+. ++.++++++++ |+++.+|..... ..+....+. .++++.+..
T Consensus        76 ~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~-~~i~~~~~~-~~k~i~Gs~  153 (174)
T d1e3ia2          76 DCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE-MTIPTVDVI-LGRSINGTF  153 (174)
T ss_dssp             EEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSE-EEEEHHHHH-TTCEEEECS
T ss_pred             cccCCccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCc-cccchHHHh-ccCEEEEEE
Confidence            999876543   23455567789999999999865 89999999996 999999975432 222222222 245566532


Q ss_pred             e--CCCHHHHHHHHHHHHCCc
Q 020314          275 V--SPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       275 ~--~~~~~~~~~~~~~~~~g~  293 (327)
                      .  ....+++.++++++++|+
T Consensus       154 ~Gs~~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         154 FGGWKSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTS
T ss_pred             eeCCChHHHHHHHHHHHHCcC
Confidence            2  224567888888888875

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.89  E-value=7.9e-24  Score=165.96  Aligned_cols=165  Identities=25%  Similarity=0.304  Sum_probs=132.5

Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCC
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGAD  199 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~  199 (327)
                      +|+++||+++++++|||+++ +..++     ++|++|+|+| +|++|++++++++..|++|+++++ ++|+++++++|++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~-----~~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~   73 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGA-----KPGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGAD   73 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTC-----CTTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCC-----CCCCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcc
Confidence            58999999999999999999 56778     8999999998 699999999999999999998884 5789999999999


Q ss_pred             EEEeCCCCCc-ccccCCCCCcccEEEeCCCC-CcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEeCC
Q 020314          200 EVLDYKTPDG-AALKSPSGRKYDAVINCVTG-IPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSVSP  277 (327)
Q Consensus       200 ~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (327)
                      .++++.+.+. +.++.... +.|.+++++++ ..+..++++++++|+++.+|..... ..++...+..+++++.+ +...
T Consensus        74 ~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~-~~~~~~~~~~~~~~i~g-s~~~  150 (168)
T d1rjwa2          74 LVVNPLKEDAAKFMKEKVG-GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE-MPIPIFDTVLNGIKIIG-SIVG  150 (168)
T ss_dssp             EEECTTTSCHHHHHHHHHS-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE-EEEEHHHHHHTTCEEEE-CCSC
T ss_pred             eecccccchhhhhcccccC-CCceEEeecCCHHHHHHHHHHhccCCceEecccccCC-CCCCHHHHHHCCcEEEE-EeeC
Confidence            9999888763 22222222 34444455554 4599999999999999999865433 33455566778888887 4556


Q ss_pred             CHHHHHHHHHHHHCCcee
Q 020314          278 KGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       278 ~~~~~~~~~~~~~~g~l~  295 (327)
                      .+++++++++++++|+++
T Consensus       151 ~~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         151 TRKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             CHHHHHHHHHHHHTTSCC
T ss_pred             CHHHHHHHHHHHHhCCCC
Confidence            788999999999999874

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.89  E-value=2.8e-23  Score=163.04  Aligned_cols=162  Identities=20%  Similarity=0.233  Sum_probs=130.8

Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCC
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGAD  199 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~  199 (327)
                      +|+++||.+ .++.+||+++ +..++     ++|++|+|+| +|++|++++|+|+++|++|+++++ ++|+++++++|++
T Consensus         1 VS~e~Aal~-ePla~a~~a~-~~~~~-----~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~   72 (170)
T d1e3ja2           1 VSLEEGALL-EPLSVGVHAC-RRAGV-----QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD   72 (170)
T ss_dssp             SCHHHHHTH-HHHHHHHHHH-HHHTC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS
T ss_pred             CCHHHHHHH-HHHHHHHHHH-HHhCC-----CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCc
Confidence            478888876 4677999999 66778     8999999998 799999999999999999999985 4789999999999


Q ss_pred             EEEeCCCCC--c----ccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEE
Q 020314          200 EVLDYKTPD--G----AALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVP  272 (327)
Q Consensus       200 ~v~~~~~~~--~----~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  272 (327)
                      ..++.+...  .    +.+....+.++|++|||+|++. ++.++++++++|+++.+|..... ..++...+..+++++.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~-~~~~~~~~~~k~i~i~g  151 (170)
T d1e3ja2          73 VTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQM-VTVPLVNACAREIDIKS  151 (170)
T ss_dssp             EEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSC-CCCCHHHHHTTTCEEEE
T ss_pred             EEEeccccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCC-CCcCHHHHHHCCCEEEE
Confidence            877654432  1    2233445678999999999875 89999999999999999976543 34566677888888888


Q ss_pred             EEeCCCHHHHHHHHHHHHCCc
Q 020314          273 FSVSPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~g~  293 (327)
                      .+  ...++++++++++++|+
T Consensus       152 s~--~~~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         152 VF--RYCNDYPIALEMVASGR  170 (170)
T ss_dssp             CC--SCSSCHHHHHHHHHTTS
T ss_pred             EE--CCHHHHHHHHHHHHcCC
Confidence            43  23447899999999886

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.1e-23  Score=165.05  Aligned_cols=160  Identities=23%  Similarity=0.206  Sum_probs=125.6

Q ss_pred             CChhhhcccCchHHHHHHHHHHh--hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcC
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQS--LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLG  197 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~--~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg  197 (327)
                      +|+.+||.+++++.|||+++...  .+..    .++++|||+||+|++|.+++|+||++|++|++++++ ++.+.++++|
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~----~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lG   76 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVR----PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLG   76 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCC----GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHT
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCC----CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhc
Confidence            57899999999999999876432  2221    456689999999999999999999999999999854 7888999999


Q ss_pred             CCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEEEe-C
Q 020314          198 ADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFSV-S  276 (327)
Q Consensus       198 ~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~  276 (327)
                      ++.++|+++.+..  +......+|.++|++|++.+...+++++++|+++.+|...+.....+...+.++++++.|+.. .
T Consensus        77 ad~vi~~~~~~~~--~~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~~~  154 (177)
T d1o89a2          77 ASRVLPRDEFAES--RPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVM  154 (177)
T ss_dssp             EEEEEEGGGSSSC--CSSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCSSS
T ss_pred             cccccccccHHHH--HHHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEeccc
Confidence            9999998765532  223345679999999999999999999999999999976655455556667778888888543 3


Q ss_pred             CCHHHHHHHH
Q 020314          277 PKGENLDFLV  286 (327)
Q Consensus       277 ~~~~~~~~~~  286 (327)
                      ..++...+++
T Consensus       155 ~~~~~~~~~~  164 (177)
T d1o89a2         155 TPPERRAQAW  164 (177)
T ss_dssp             CCHHHHHHHH
T ss_pred             CCHHHHHHHH
Confidence            3444444443

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.3e-23  Score=163.60  Aligned_cols=164  Identities=17%  Similarity=0.175  Sum_probs=134.7

Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCC
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGA  198 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~  198 (327)
                      +|+++||.+ .++.+||+++ +.+++     ++|++|+|+| +|++|++++++|+++|+ +|+++++ ++|+++++++|+
T Consensus         1 vS~e~Aal~-epla~a~~a~-~~~~~-----~~gd~VlI~G-~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga   72 (171)
T d1pl8a2           1 VTFEEGALI-EPLSVGIHAC-RRGGV-----TLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA   72 (171)
T ss_dssp             SCHHHHHHH-HHHHHHHHHH-HHHTC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC
T ss_pred             CCHHHHHHH-HHHHHHHHHH-HHhCC-----CCCCEEEEEC-CCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCC
Confidence            478888866 4678999999 66788     8999999998 69999999999999999 7888884 578999999999


Q ss_pred             CEEEeCCCCCc----ccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCchhHHHHhhhhccccceeeEEE
Q 020314          199 DEVLDYKTPDG----AALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSPRVLLTFAWKKLTFSKKQLVPF  273 (327)
Q Consensus       199 ~~v~~~~~~~~----~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  273 (327)
                      +.++++++.+.    +......+.++|++|||+|++. ++.++++++++|+++.+|..... ..++...+.++++++.+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~-~~~~~~~~~~k~l~i~Gs  151 (171)
T d1pl8a2          73 DLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEM-TTVPLLHAAIREVDIKGV  151 (171)
T ss_dssp             SEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSC-CCCCHHHHHHTTCEEEEC
T ss_pred             cccccccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCC-CccCHHHHHHCCcEEEEE
Confidence            99998877662    2233345678999999999875 89999999999999999976543 356667778889998884


Q ss_pred             EeCCCHHHHHHHHHHHHCCcee
Q 020314          274 SVSPKGENLDFLVKLVKEGKLK  295 (327)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~g~l~  295 (327)
                      +.  ..++++++++++++|+|+
T Consensus       152 ~~--~~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         152 FR--YCNTWPVAISMLASKSVN  171 (171)
T ss_dssp             CS--CSSCHHHHHHHHHTTSCC
T ss_pred             eC--CHhHHHHHHHHHHcCCCC
Confidence            32  245789999999999874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.88  E-value=3.3e-23  Score=163.65  Aligned_cols=166  Identities=12%  Similarity=0.014  Sum_probs=126.8

Q ss_pred             ChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCC
Q 020314          122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGAD  199 (327)
Q Consensus       122 ~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~  199 (327)
                      ++++||.++|++.|+|+++.+.+++     ++|++|||+| +|++|++++|+++++|+ +|+++++ ++|+++++++|++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~-----~~G~tVlI~G-aGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~   75 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKL-----EPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT   75 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCC-----CTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCC-----CCCCEEEEec-chhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCc
Confidence            4788999999999999999888888     9999999999 58999999999999998 5666664 4689999999999


Q ss_pred             EEEeCCCCC---cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc-hhHHHHhhhhccccceeeEEEE
Q 020314          200 EVLDYKTPD---GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP-RVLLTFAWKKLTFSKKQLVPFS  274 (327)
Q Consensus       200 ~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~  274 (327)
                      +++++.+..   .+.++.+.++++|++||++|++. ++.+..+++++|+++.++... .............+++++.+..
T Consensus        76 ~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~  155 (176)
T d2fzwa2          76 ECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTA  155 (176)
T ss_dssp             EEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECS
T ss_pred             EEEeCCchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEe
Confidence            999886543   23445556679999999999766 778889999998887765332 2111112222234566777743


Q ss_pred             e--CCCHHHHHHHHHHHHCCc
Q 020314          275 V--SPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       275 ~--~~~~~~~~~~~~~~~~g~  293 (327)
                      .  ....+++.++++++++|+
T Consensus       156 ~G~~~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         156 FGGWKSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTS
T ss_pred             eeCCcHHHHHHHHHHHHHcCC
Confidence            3  223577889999998886

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=1.9e-23  Score=166.25  Aligned_cols=167  Identities=22%  Similarity=0.240  Sum_probs=119.4

Q ss_pred             CChhhhcccCchHHHHHHHHHHhhCCccCCCCCC--CeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-Cc-HHHHHh
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQ--KNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RN-IELVKS  195 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~--~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~-~~~~~~  195 (327)
                      +|+.+.| +++++.|||++|.+..++     ++|  ++|||+||+|++|++++|+||..|++ |++++++ ++ .++.+.
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~-----~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~   75 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHI-----SAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSE   75 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCC-----CTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHH
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCC-----CCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhc
Confidence            4555543 677899999999999888     666  88999999999999999999999995 4444543 44 456679


Q ss_pred             cCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCCchhHH---------HHhhhhccc
Q 020314          196 LGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPSPRVLL---------TFAWKKLTF  265 (327)
Q Consensus       196 lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~---------~~~~~~~~~  265 (327)
                      +|++.++|+++++ .+.++...++|+|+|||++|++.+..++++++++|+++.+|..++...         ......+..
T Consensus        76 ~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          76 LGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             SCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHH
T ss_pred             ccceEEeeccchhHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            9999999998877 344444456789999999999889999999999999999985332111         111122334


Q ss_pred             cceeeEEEEeCC----CHHHHHHHHHHHHCCc
Q 020314          266 SKKQLVPFSVSP----KGENLDFLVKLVKEGK  293 (327)
Q Consensus       266 ~~~~~~~~~~~~----~~~~~~~~~~~~~~g~  293 (327)
                      +++.+.++....    ..+.++++.+++++|+
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            555666543211    2455677777777764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.87  E-value=9.7e-23  Score=160.12  Aligned_cols=163  Identities=14%  Similarity=0.113  Sum_probs=126.6

Q ss_pred             ChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHHhcCCC
Q 020314          122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVKSLGAD  199 (327)
Q Consensus       122 ~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~~lg~~  199 (327)
                      ++++||.++|++.|+|+++.+.+++     ++|++|+|+| +|++|++++|+++++|+ +|++++ +++|+++++++|++
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~-----~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~   76 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKV-----KPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGAT   76 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCS
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCC-----CCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCc
Confidence            4889999999999999999888888     9999999999 79999999999999996 899998 56899999999999


Q ss_pred             EEEeCCCCCc---ccccCCCCCcccEEEeCCCCCc-ccccccccCCC-cEEEeecCCchhHHHHhhhhccccceeeEEEE
Q 020314          200 EVLDYKTPDG---AALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTT-GKVIDFNPSPRVLLTFAWKKLTFSKKQLVPFS  274 (327)
Q Consensus       200 ~v~~~~~~~~---~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  274 (327)
                      +++|+++.+.   ...+.+.++|+|+++|++|++. +..++..+.++ |+++.+|...............++++++.|..
T Consensus        77 ~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~  156 (176)
T d1d1ta2          77 ECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCV  156 (176)
T ss_dssp             EEECGGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECS
T ss_pred             EEECccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEE
Confidence            9999876542   2345567789999999999875 67777766555 99999996543322111222344566777743


Q ss_pred             e--CCCHHHHHHHHHHHH
Q 020314          275 V--SPKGENLDFLVKLVK  290 (327)
Q Consensus       275 ~--~~~~~~~~~~~~~~~  290 (327)
                      .  ...++++.++++++.
T Consensus       157 ~G~~~~~~dip~li~~~~  174 (176)
T d1d1ta2         157 FGGLKSRDDVPKLVTEFL  174 (176)
T ss_dssp             GGGCCHHHHHHHHHHHHT
T ss_pred             EeCCCcHHHHHHHHHHHh
Confidence            2  223677778777754

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.87  E-value=2e-22  Score=158.89  Aligned_cols=165  Identities=15%  Similarity=0.059  Sum_probs=127.3

Q ss_pred             ChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCC
Q 020314          122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGAD  199 (327)
Q Consensus       122 ~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~  199 (327)
                      ++++||.++|++.|+|+++.+.+++     ++|++|+|+| +|++|+.++++++..|+ +|+++++ ++|++.++++|++
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~-----k~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd   75 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKV-----EPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT   75 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCC-----CCCCEEEEEe-cCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCc
Confidence            4788999999999999999888888     9999999999 79999999999998887 6777775 5789999999999


Q ss_pred             EEEeCCCCC---cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEE-EeecCCchhHHHHhhhhccccceeeEEEE
Q 020314          200 EVLDYKTPD---GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKV-IDFNPSPRVLLTFAWKKLTFSKKQLVPFS  274 (327)
Q Consensus       200 ~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~-v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  274 (327)
                      +++|+.+++   .+..+.+.++++|+++|++|+.. +..+..+++++|.+ +..+..... .........++++++.+..
T Consensus        76 ~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~-~~~~~~~~~~~~~~i~Gs~  154 (175)
T d1cdoa2          76 DFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-DVATRPIQLIAGRTWKGSM  154 (175)
T ss_dssp             EEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSS-CEEECHHHHHTTCEEEECS
T ss_pred             EEEcCCCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCc-ccCccHHHHHCCcEEEEEE
Confidence            999987654   24555667789999999999865 77888887777554 445543322 2223334445667777743


Q ss_pred             e--CCCHHHHHHHHHHHHCCc
Q 020314          275 V--SPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       275 ~--~~~~~~~~~~~~~~~~g~  293 (327)
                      .  ...+++++++++++++|+
T Consensus       155 ~G~~~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         155 FGGFKGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTS
T ss_pred             EeCCcHHHHHHHHHHHHHcCC
Confidence            2  223678999999999885

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.87  E-value=2.8e-22  Score=158.04  Aligned_cols=166  Identities=15%  Similarity=0.039  Sum_probs=128.8

Q ss_pred             ChhhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCC
Q 020314          122 SAAEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGAD  199 (327)
Q Consensus       122 ~~~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~  199 (327)
                      ++++||.++|++.|+|+++.+.+++     ++|++|+|+| +|++|++++++++..|+ +|+++++ ++|+++++++|++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~v-----k~GdtVlV~G-aGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~   75 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKV-----TQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT   75 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCC-----CCCCEEEEEC-CCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCe
Confidence            4788999999999999999888889     9999999999 58999999999999997 7888874 5789999999999


Q ss_pred             EEEeCCCCC---cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEee-cCCchhHHHHhhhhccccceeeEEEE
Q 020314          200 EVLDYKTPD---GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDF-NPSPRVLLTFAWKKLTFSKKQLVPFS  274 (327)
Q Consensus       200 ~v~~~~~~~---~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~-g~~~~~~~~~~~~~~~~~~~~~~~~~  274 (327)
                      +++++.+.+   .+..+.+.++++|++||++|.+. +..++..++++|+.+.+ +................+++++.+..
T Consensus        76 ~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~  155 (176)
T d2jhfa2          76 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAI  155 (176)
T ss_dssp             EEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECS
T ss_pred             eEEecCCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEE
Confidence            999875433   34555667789999999999876 77888999887555444 43333222223334456788888743


Q ss_pred             e--CCCHHHHHHHHHHHHCCc
Q 020314          275 V--SPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       275 ~--~~~~~~~~~~~~~~~~g~  293 (327)
                      .  ...+++++++++++++|+
T Consensus       156 ~G~~~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         156 FGGFKSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTS
T ss_pred             EeCCCHHHHHHHHHHHHHCcC
Confidence            2  234678999999998875

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.82  E-value=1.4e-20  Score=149.96  Aligned_cols=162  Identities=12%  Similarity=0.005  Sum_probs=121.9

Q ss_pred             hhhcccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec-CCcHHHHHhcCCCEE
Q 020314          124 AEGAGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG-ARNIELVKSLGADEV  201 (327)
Q Consensus       124 ~~aa~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~-~~~~~~~~~lg~~~v  201 (327)
                      ++.+++...+.|+|+++ +.+++     ++|++|||+| +|++|++++++|+..|+ +|+++++ ++|++.++++|++.+
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v-----~~G~tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~   74 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGV-----GPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIA   74 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTC-----CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEE
T ss_pred             chHHhcccHHHHHHHHH-HHhCC-----CCCCEEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEE
Confidence            46778888999999998 57888     9999999998 69999999999999998 7777775 478999999999999


Q ss_pred             EeCCCCC--cccccCCCCCcccEEEeCCCCC----------------cccccccccCCCcEEEeecCCchhHH-------
Q 020314          202 LDYKTPD--GAALKSPSGRKYDAVINCVTGI----------------PWSTFEPNLGTTGKVIDFNPSPRVLL-------  256 (327)
Q Consensus       202 ~~~~~~~--~~~~~~~~~~~~d~v~d~~g~~----------------~~~~~~~~l~~~G~~v~~g~~~~~~~-------  256 (327)
                      +++.+.+  ..+.+.+++.++|++||++|.+                .++.++++++++|+++.+|.......       
T Consensus        75 ~~~~~~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~  154 (195)
T d1kola2          75 DLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAA  154 (195)
T ss_dssp             ETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHH
T ss_pred             EeCCCcCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhh
Confidence            9887766  3455667888999999999954                37788899999999999985321100       


Q ss_pred             -----HHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCc
Q 020314          257 -----TFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGK  293 (327)
Q Consensus       257 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  293 (327)
                           .+.......+++.+.. ...+.++.++++++++..++
T Consensus       155 ~~~~~~~~~~~~~~k~~~i~~-g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         155 KIGSLSIRFGLGWAKSHSFHT-GQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             HTTCCCCCHHHHHHTTCEEEE-SSCCHHHHHHHHHHHHHTTS
T ss_pred             hcCceeeeHHHHHhhcceecc-CCCchHHHHHHHHHHHHcCC
Confidence                 1111122234444332 11233566788888887764

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.77  E-value=8.1e-18  Score=126.57  Aligned_cols=136  Identities=15%  Similarity=0.134  Sum_probs=103.8

Q ss_pred             cceEEEEEecc--CCC-ccceEEeeccCCCCCCCeEEEEEeEEeeChhhHHHHhcCCCCCCCCCCCeeecccceEEEEec
Q 020314            5 AVMHAVQYDSY--GGG-VAGLKHVEVPVPTPNKDEALLKVEAASINPIDWKLQKGMLRPFLPRKFPFIPASDVAGEVIGL   81 (327)
Q Consensus         5 ~~~~a~~~~~~--g~~-~~~l~~~~~~~~~~~~~eV~V~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   81 (327)
                      ++.|+|++.+.  |.| +++|++++.++|+|++||||||+++.|+++..+......       .....+..+.+|+|++ 
T Consensus         2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~~-------~~g~~~~g~~vg~Vv~-   73 (147)
T d1v3va1           2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKRL-------KEGAVMMGQQVARVVE-   73 (147)
T ss_dssp             CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGGS-------CTTSBCCCCEEEEEEE-
T ss_pred             cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEccccccccccc-------ccCCccccceEEEEEE-
Confidence            56899999987  333 577999999999999999999999999999766543221       2223445577899998 


Q ss_pred             CCCCCCCCCCCEEEEEccCcccceeEeecCCceeeCCCCCChh-----hhcccCchHHHH-HHHHHHhhCCccCCCCCCC
Q 020314           82 GSEVKNFKVGDKVVAVLSGGGLAEFAVAKESLTVARPQEVSAA-----EGAGIPCAGLTA-HQALTQSLGVKLDGSGQQK  155 (327)
Q Consensus        82 G~~~~~~~~Gd~V~~~~~~g~~a~~~~~~~~~~~~ip~~~~~~-----~aa~~~~~~~ta-~~al~~~~~~~~~~~~~~~  155 (327)
                       +++++|++||+|++.   ++|++|.+.+...+.++|++.+..     ..+++...++|| |..+...  -     +.|+
T Consensus        74 -S~~~~f~~GD~V~g~---~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~~--~-----k~Ge  142 (147)
T d1v3va1          74 -SKNSAFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLNG--A-----NLGK  142 (147)
T ss_dssp             -ESCTTSCTTCEEEEC---CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHTT--C-----CSSE
T ss_pred             -eCCCcccCCCEEEEc---cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhhCC--C-----CCCC
Confidence             888899999999974   789999999999999998765432     345566666664 4455332  3     7899


Q ss_pred             eEEE
Q 020314          156 NILI  159 (327)
Q Consensus       156 ~vlV  159 (327)
                      +|++
T Consensus       143 tvv~  146 (147)
T d1v3va1         143 AVVT  146 (147)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            9987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=2.7e-15  Score=98.58  Aligned_cols=73  Identities=34%  Similarity=0.301  Sum_probs=64.4

Q ss_pred             CChhhhcccCchHHHHHHHHHHh---hCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhc
Q 020314          121 VSAAEGAGIPCAGLTAHQALTQS---LGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSL  196 (327)
Q Consensus       121 ~~~~~aa~~~~~~~ta~~al~~~---~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~l  196 (327)
                      +|+++|+.++.++.|||+++...   ...     +++++|||+|++|++|.+++|+++.+|++|++++ ++++.++++++
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~-----~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~l   75 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVR-----PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSL   75 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCC-----GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhc-----cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHC
Confidence            57899999999999999887543   334     7899999999999999999999999999999988 55899999998


Q ss_pred             CC
Q 020314          197 GA  198 (327)
Q Consensus       197 g~  198 (327)
                      |+
T Consensus        76 GA   77 (77)
T d1o8ca2          76 GA   77 (77)
T ss_dssp             TE
T ss_pred             CC
Confidence            85

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.66  E-value=9.7e-05  Score=55.54  Aligned_cols=96  Identities=24%  Similarity=0.200  Sum_probs=68.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCEEEeC-CC-CC-------------------cc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADEVLDY-KT-PD-------------------GA  210 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~v~~~-~~-~~-------------------~~  210 (327)
                      +.-+|+|.| +|.+|+.+++.|+.+|++|.+.+ +.++++.+++++...+... .. ..                   .+
T Consensus        28 ~pa~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            456799999 79999999999999999999998 6689999999887654210 00 00                   00


Q ss_pred             -cccCCCCCcccEEEeCCC---CC--c--ccccccccCCCcEEEeecCC
Q 020314          211 -ALKSPSGRKYDAVINCVT---GI--P--WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       211 -~~~~~~~~~~d~v~d~~g---~~--~--~~~~~~~l~~~G~~v~~g~~  251 (327)
                       +.+..  ...|+|+-++=   ..  .  -+.+++.|+++..+|++...
T Consensus       107 ~l~~~l--~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaid  153 (183)
T d1l7da1         107 AVLKEL--VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVE  153 (183)
T ss_dssp             HHHHHH--TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHHH--HhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeec
Confidence             00101  24899998763   21  1  45788999999999998643

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.65  E-value=1.6e-05  Score=58.98  Aligned_cols=94  Identities=16%  Similarity=0.183  Sum_probs=65.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCCCE--EEeCCCCC-cccccCCCCCcccEEEeCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGADE--VLDYKTPD-GAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~~~--v~~~~~~~-~~~~~~~~~~~~d~v~d~~g  228 (327)
                      +.-+|+|.| +|..|+.+++.|+.+|++|.+.+ +.++++.++......  ....++.. .+.+     ...|+||.++=
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~-----~~aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAV-----AEADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHH-----HTCSEEEECCC
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhh-----ccCcEEEEeee
Confidence            567899999 79999999999999999999998 456777665443221  11111111 1122     24799999874


Q ss_pred             C---C--c--ccccccccCCCcEEEeecCCc
Q 020314          229 G---I--P--WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       229 ~---~--~--~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      -   .  .  .+..++.|+++..+|++....
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvaidq  135 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQ  135 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             cCCcccCeeecHHHHhhcCCCcEEEEeecCC
Confidence            2   1  1  457889999999999987543

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.61  E-value=7.3e-05  Score=58.54  Aligned_cols=110  Identities=17%  Similarity=0.130  Sum_probs=73.1

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-----cHHHHHhcCCCEEE
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-----NIELVKSLGADEVL  202 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-----~~~~~~~lg~~~v~  202 (327)
                      .+..+.+.|. .+ +..++     +++++||..|  ++.|..++.+++..|.+|+++...+     ..+.++++|.+.+.
T Consensus        60 ~is~P~~~a~-ml-~~L~l-----~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~  130 (215)
T d1jg1a_          60 TVSAPHMVAI-ML-EIANL-----KPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVH  130 (215)
T ss_dssp             EECCHHHHHH-HH-HHHTC-----CTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEE
T ss_pred             hhhhhhhHHH-HH-Hhhcc-----CccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeE
Confidence            3444544443 33 56677     8999999998  5678888888888788899888542     23445677876554


Q ss_pred             eCCCCCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEee
Q 020314          203 DYKTPDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~  248 (327)
                      ....+...-  ......||.|+-+.+-+. -...++.|+++|++|..
T Consensus       131 ~~~gd~~~g--~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         131 VILGDGSKG--FPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             EEESCGGGC--CGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             EEECccccC--CcccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            333222111  122356999987766444 56778899999999863

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.46  E-value=7.7e-06  Score=65.63  Aligned_cols=35  Identities=23%  Similarity=0.271  Sum_probs=31.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +|++|||+||++++|.+.++.+...|++|+.+...
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~   35 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVV   35 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            47899999999999999999999999999988744

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.45  E-value=0.00041  Score=56.05  Aligned_cols=101  Identities=20%  Similarity=0.111  Sum_probs=66.0

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEe-cCCcHHHH----HhcCCCEEEeCCCCCcccccC
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATC-GARNIELV----KSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~-~~~~~~~~----~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      ...++     ++|++||=.|  .|.|..+..+|+..|  ++|++++ +++..+.+    +.++....+.....+  ....
T Consensus        97 ~~l~i-----~pG~~VLDiG--~GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d--~~~~  167 (266)
T d1o54a_          97 MMLDV-----KEGDRIIDTG--VGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD--ISEG  167 (266)
T ss_dssp             HHTTC-----CTTCEEEEEC--CTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC--GGGC
T ss_pred             HhhCC-----CCCCEEEECC--CCCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecc--cccc
Confidence            56677     9999999998  344788888898765  6999998 44444433    455542211111111  1122


Q ss_pred             CCCCcccEEEeCCCCCc--ccccccccCCCcEEEeecCC
Q 020314          215 PSGRKYDAVINCVTGIP--WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .....+|.|+--...+.  +..+.+.|+|+|+++.+.+.
T Consensus       168 ~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~P~  206 (266)
T d1o54a_         168 FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCPT  206 (266)
T ss_dssp             CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred             ccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEeCc
Confidence            33456888877666543  78899999999999876554

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.00044  Score=55.23  Aligned_cols=75  Identities=23%  Similarity=0.249  Sum_probs=53.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEE--eCCCCC--cccccCCCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVL--DYKTPD--GAALKSPSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~--~~~~~~--~~~~~~~~~~~~d~v~d~  226 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.++ ++++ ..++++....+  |-.+.+  .+.++..  +.+|+++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~--g~iDilVnn   83 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSV--GPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHh--CCceEEEec
Confidence            78999999999999999999999999999998865 4444 34555544333  222222  1233333  469999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        84 Ag~   86 (244)
T d1pr9a_          84 AAV   86 (244)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            885

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.36  E-value=0.00019  Score=55.13  Aligned_cols=75  Identities=12%  Similarity=0.087  Sum_probs=49.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-Hh----cCC-CEEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KS----LGA-DEVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~----lg~-~~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      -+|++++|+||+|++|..+++.+...|++|+.+.++ ++.+.+ +.    ... ....|..+.. ...+..  +++|++|
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~--~~iDili   97 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDA-SRAEAV--KGAHFVF   97 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHH-HHHHHT--TTCSEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHH-HHHHHh--cCcCeee
Confidence            389999999999999999999999999999998865 443322 22    221 2223333222 111111  4589999


Q ss_pred             eCCCC
Q 020314          225 NCVTG  229 (327)
Q Consensus       225 d~~g~  229 (327)
                      ++.|.
T Consensus        98 n~Ag~  102 (191)
T d1luaa1          98 TAGAI  102 (191)
T ss_dssp             ECCCT
T ss_pred             ecCcc
Confidence            99874

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.32  E-value=0.00045  Score=54.79  Aligned_cols=73  Identities=22%  Similarity=0.296  Sum_probs=50.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+++++  +.+++.+...+. |-++.-....+..  +.+|+++++.|.
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~--~~l~~~~~~~~~~Dv~~~~~~~~~~~--g~iD~lVnnAG~   76 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE--ELLKRSGHRYVVCDLRKDLDLLFEKV--KEVDILVLNAGG   76 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHTCSEEEECCTTTCHHHHHHHS--CCCSEEEECCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--HHHHhcCCcEEEcchHHHHHHHHHHh--CCCcEEEecccc
Confidence            689999999999999999999999999999888542  344555544332 2222112222322  359999999884

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.30  E-value=0.00081  Score=53.55  Aligned_cols=75  Identities=20%  Similarity=0.139  Sum_probs=52.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeC--CCCC--cccccCCCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDY--KTPD--GAALKSPSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~--~~~~--~~~~~~~~~~~~d~v~d~  226 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.++ ++.+ ..++++....+..  .+.+  .+.++..  +++|+++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI--GPVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc--CCCeEEEEC
Confidence            68999999999999999999999999999999865 4443 4455554333322  2222  1233333  469999999


Q ss_pred             CCC
Q 020314          227 VTG  229 (327)
Q Consensus       227 ~g~  229 (327)
                      .|.
T Consensus        82 Ag~   84 (242)
T d1cyda_          82 AAL   84 (242)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            884

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.22  E-value=0.00031  Score=56.27  Aligned_cols=76  Identities=16%  Similarity=0.120  Sum_probs=54.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEE-EeCCCCC--cc----cccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEV-LDYKTPD--GA----ALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v-~~~~~~~--~~----~~~~~~~~~~d~v  223 (327)
                      -+|+++||+||++++|.+.++.+...|++|+...++ ++.+.+++++...+ .|-.+.+  .+    ..+..  +++|++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--G~iDiL   80 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYAL--GRVDVL   80 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHH--SCCCEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhc--CCCCeE
Confidence            479999999999999999999999999999988854 56667777776533 2222221  11    11212  469999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        81 VnnAG~   86 (248)
T d2d1ya1          81 VNNAAI   86 (248)
T ss_dssp             EECCCC
T ss_pred             EEeCcC
Confidence            999884

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.0017  Score=47.62  Aligned_cols=104  Identities=13%  Similarity=0.012  Sum_probs=73.2

Q ss_pred             HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHH-HHHhcCCCEEEeCCCCCccccc
Q 020314          135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIE-LVKSLGADEVLDYKTPDGAALK  213 (327)
Q Consensus       135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~  213 (327)
                      +.+.++.+..++.    -.|++++|.| -|-+|...++.++.+|++|+++......+ .+.--|.. +...    .+.. 
T Consensus         9 S~~~~~~r~t~~~----l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~-v~~~----~~a~-   77 (163)
T d1li4a1           9 SLIDGIKRATDVM----IAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYE-VTTM----DEAC-   77 (163)
T ss_dssp             HHHHHHHHHHCCC----CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCH----HHHT-
T ss_pred             hHHHHHHHHhCce----ecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceE-eeeh----hhhh-
Confidence            4455666766663    5899999999 99999999999999999999998543222 22222322 2111    1111 


Q ss_pred             CCCCCcccEEEeCCCCCc--ccccccccCCCcEEEeecCCch
Q 020314          214 SPSGRKYDAVINCVTGIP--WSTFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~~~  253 (327)
                          ...|+++-++|...  -...++.|+++..++.+|....
T Consensus        78 ----~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~  115 (163)
T d1li4a1          78 ----QEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDV  115 (163)
T ss_dssp             ----TTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTT
T ss_pred             ----hhccEEEecCCCccchhHHHHHhccCCeEEEEeccccc
Confidence                23699999999754  4588899999999999987643

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.08  E-value=0.0015  Score=48.78  Aligned_cols=65  Identities=12%  Similarity=0.192  Sum_probs=46.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .++++|+|.| +||++.+++..++..|+ +++.+.|+ ++.+ +.+.++...+ +..          ....+|++++|++
T Consensus        15 ~~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~----------~~~~~DliINaTp   82 (167)
T d1npya1          15 NKNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSL----------ENQQADILVNVTS   82 (167)
T ss_dssp             CTTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCC----------TTCCCSEEEECSS
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hcc----------cccchhhheeccc
Confidence            5778999999 79999999999999998 67766665 4433 4455554332 111          1135899999986

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.07  E-value=0.00096  Score=53.67  Aligned_cols=78  Identities=13%  Similarity=0.149  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--cc---cccCCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--GA---ALKSPSGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~---~~~~~~~~~  219 (327)
                      +|+++||+||++++|.+.++.+...|++|+.++++ ++++    .+++.+.... +  |-.+.+  .+   ......++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999999999865 3332    3345555432 2  222222  11   111122346


Q ss_pred             ccEEEeCCCCC
Q 020314          220 YDAVINCVTGI  230 (327)
Q Consensus       220 ~d~v~d~~g~~  230 (327)
                      .|+++++.|..
T Consensus        85 idilinnag~~   95 (258)
T d1ae1a_          85 LNILVNNAGVV   95 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             cEEEecccccc
Confidence            89999999853

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00055  Score=54.71  Aligned_cols=75  Identities=16%  Similarity=0.093  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCc----ccccCCCCCcccEEEeCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDG----AALKSPSGRKYDAVINCV  227 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~----~~~~~~~~~~~d~v~d~~  227 (327)
                      +|+++||+||++++|.+.++.+...|++|+.++++ ++++.+.+.........+-...    ......  .++|.++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV--ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC--SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccccccccccccc--ccceeEEecc
Confidence            78999999999999999999999999999999865 4444443332222222221111    111211  4689999998


Q ss_pred             CC
Q 020314          228 TG  229 (327)
Q Consensus       228 g~  229 (327)
                      |.
T Consensus        83 g~   84 (245)
T d2ag5a1          83 GF   84 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            85

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.06  E-value=0.004  Score=46.42  Aligned_cols=91  Identities=16%  Similarity=0.091  Sum_probs=57.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC---EEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD---EVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~---~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      .++++|||.| +||.+.+++..+...|++++.+.|+ +|.+ +++.+...   ..+...        ......+|++++|
T Consensus        16 ~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~--------~~~~~~~dliIN~   86 (170)
T d1nyta1          16 RPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMD--------ELEGHEFDLIINA   86 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSG--------GGTTCCCSEEEEC
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccc--------cccccccceeecc
Confidence            5789999999 7999999999999999986666665 3433 34443321   111111        1122458999999


Q ss_pred             CCCCc----ccccccccCCCcEEEeecCC
Q 020314          227 VTGIP----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       227 ~g~~~----~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ++...    ...-...+.++..++++-..
T Consensus        87 Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~  115 (170)
T d1nyta1          87 TSSGISGDIPAIPSSLIHPGIYCYDMFYQ  115 (170)
T ss_dssp             CSCGGGTCCCCCCGGGCCTTCEEEESCCC
T ss_pred             cccCcccCCCCCcHHHhccCcEEEEeecC
Confidence            86322    22223456777777776543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.01  E-value=0.0013  Score=52.31  Aligned_cols=75  Identities=23%  Similarity=0.304  Sum_probs=52.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-EeCCCCC--cc----cccCCCCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-LDYKTPD--GA----ALKSPSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~~~~~~~--~~----~~~~~~~~~~d~v  223 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.++ ++.+ ..++++...+ .|-.+.+  .+    ..+..  +++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL--GRLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH--SSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhc--CCceEE
Confidence            68899999999999999999999999999998865 4444 4456665433 2222222  11    12222  359999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999984

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.98  E-value=0.0012  Score=53.21  Aligned_cols=77  Identities=14%  Similarity=0.096  Sum_probs=50.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--cccc---cCCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--GAAL---KSPSGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~~~---~~~~~~~  219 (327)
                      +|+++||+||++++|.+.++.+...|++|+...++ ++.+    .++..+.... +  |-.+.+  .+.+   ....+..
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999998999999988865 3432    2234444322 2  222221  1111   1122346


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        87 idilvnnAG~   96 (259)
T d2ae2a_          87 LNILVNNAGI   96 (259)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEECCce
Confidence            9999999984

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00059  Score=55.53  Aligned_cols=96  Identities=18%  Similarity=0.215  Sum_probs=59.3

Q ss_pred             CCeE-EEEcCCChHHHHHHH-HHHhCCCeEEEEecC-CcHH----HHHhcCCC-EEE--eCCCCC--c----ccccCCCC
Q 020314          154 QKNI-LITAASGAVGLYAVQ-LAKLGNTHVTATCGA-RNIE----LVKSLGAD-EVL--DYKTPD--G----AALKSPSG  217 (327)
Q Consensus       154 ~~~v-lV~g~~g~~G~~~~~-la~~~g~~v~~~~~~-~~~~----~~~~lg~~-~v~--~~~~~~--~----~~~~~~~~  217 (327)
                      |++| ||+||++|+|+++++ +++..|++|+..+++ ++.+    .+++.+.. ..+  |-.+.+  .    .+.+..  
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~--   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY--   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH--
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc--
Confidence            5556 899999999998775 566678999999965 4433    23333433 222  222221  1    111222  


Q ss_pred             CcccEEEeCCCCC--------------------------cccccccccCCCcEEEeecCC
Q 020314          218 RKYDAVINCVTGI--------------------------PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       218 ~~~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      +.+|+++++.|-.                          ..+.++..|++.|+++.++..
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            3699999999842                          122345577888999987653

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.95  E-value=0.00074  Score=52.66  Aligned_cols=97  Identities=21%  Similarity=0.229  Sum_probs=62.7

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHH----HHhcCCCEEEeCCCCCcccccC
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIEL----VKSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~----~~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      +..++     ++|++||-.|  .|.|..++.+++..|  .+|+++... +..+.    ++..+.+.+.-...+.....  
T Consensus        69 ~~l~l-----~~g~~VLdiG--~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~--  139 (213)
T d1dl5a1          69 EWVGL-----DKGMRVLEIG--GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV--  139 (213)
T ss_dssp             HHTTC-----CTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC--
T ss_pred             Hhhhc-----cccceEEEec--CccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc--
Confidence            56677     9999999999  344888888998765  489988854 33333    34455543322111111111  


Q ss_pred             CCCCcccEEEeCCCCCc-ccccccccCCCcEEEe
Q 020314          215 PSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVID  247 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~  247 (327)
                      .....||+|+.+.+-+. .+..++.|+|+|+++.
T Consensus       140 ~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~  173 (213)
T d1dl5a1         140 PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIV  173 (213)
T ss_dssp             GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEE
T ss_pred             ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEE
Confidence            12245999998776444 4567889999999986

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.001  Score=53.28  Aligned_cols=75  Identities=13%  Similarity=0.124  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCCEEEeC--CCCC--cc----cccCCCCCcccE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGADEVLDY--KTPD--GA----ALKSPSGRKYDA  222 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~~v~~~--~~~~--~~----~~~~~~~~~~d~  222 (327)
                      +|+++||+||++++|.+.++.+...|++|+...++ ++.+.+ ++++....+..  .+.+  .+    ..+..  +++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~--g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF--GRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH--SCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhc--CCCCE
Confidence            79999999999999999999999999999998865 455444 45544333222  2221  11    11111  35999


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus        83 lVnnAG~   89 (250)
T d1ydea1          83 VVNNAGH   89 (250)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9999983

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.89  E-value=0.0003  Score=47.07  Aligned_cols=34  Identities=24%  Similarity=0.221  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++|+|.| .|..|+++++++...|++|++.+..
T Consensus         4 ~~K~v~ViG-lG~sG~s~a~~L~~~g~~v~~~D~~   37 (93)
T d2jfga1           4 QGKNVVIIG-LGLTGLSCVDFFLARGVTPRVMDTR   37 (93)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESS
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHCCCEEEEeeCC
Confidence            678899999 7999999999999999999999853

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.87  E-value=0.00098  Score=53.45  Aligned_cols=75  Identities=17%  Similarity=0.142  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE-E--eCCCCC--cc----cccCCCCCccc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV-L--DYKTPD--GA----ALKSPSGRKYD  221 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v-~--~~~~~~--~~----~~~~~~~~~~d  221 (327)
                      +|+++||+||++++|.+.++.+...|++|+...++ ++.+ ..++++.... +  |-.+.+  .+    ..+..  +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF--GSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH--SCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHc--CCcc
Confidence            78999999999999999999888899999988865 4443 4466664322 1  222221  11    11212  3599


Q ss_pred             EEEeCCCC
Q 020314          222 AVINCVTG  229 (327)
Q Consensus       222 ~v~d~~g~  229 (327)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (254)
T d1hdca_          82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEecCcc
Confidence            99999984

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.87  E-value=0.0014  Score=53.07  Aligned_cols=95  Identities=18%  Similarity=0.088  Sum_probs=62.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC--CcH----HHHHhcCCCEEEe-CCCCC----cc----cccCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA--RNI----ELVKSLGADEVLD-YKTPD----GA----ALKSPSG  217 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~--~~~----~~~~~lg~~~v~~-~~~~~----~~----~~~~~~~  217 (327)
                      +|+++||+||++++|.+.++.+...|++|+...+.  +..    +.+++.+.+.... .+-.+    .+    ..+..  
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~--   94 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF--   94 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH--
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh--
Confidence            68999999999999999999999999999988743  222    2334566554332 22111    11    11212  


Q ss_pred             CcccEEEeCCCCC--------------------------cccccccccCCCcEEEeec
Q 020314          218 RKYDAVINCVTGI--------------------------PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       218 ~~~d~v~d~~g~~--------------------------~~~~~~~~l~~~G~~v~~g  249 (327)
                      +++|+++++.|..                          ..+.+...|..+|+++.++
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~  152 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG  152 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccc
Confidence            3589999998853                          1334445777888887664

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.85  E-value=0.0012  Score=53.05  Aligned_cols=75  Identities=15%  Similarity=0.102  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEE---eCCCCC--cc----cccCCCCCccc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVL---DYKTPD--GA----ALKSPSGRKYD  221 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~---~~~~~~--~~----~~~~~~~~~~d  221 (327)
                      +|+++||+||++++|++.++.+...|++|+...++ ++.+ ..++++.....   |-.+.+  .+    ..+..  +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~--g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRW--GSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH--SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHh--CCcc
Confidence            68899999999999999999999999999988865 4443 45677765332   222222  11    11111  4699


Q ss_pred             EEEeCCCC
Q 020314          222 AVINCVTG  229 (327)
Q Consensus       222 ~v~d~~g~  229 (327)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99999984

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.85  E-value=0.0017  Score=51.91  Aligned_cols=75  Identities=17%  Similarity=0.205  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH-----HHHHhcCCCEE-E--eCCCCC--cc----cccCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI-----ELVKSLGADEV-L--DYKTPD--GA----ALKSPSG  217 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~-----~~~~~lg~~~v-~--~~~~~~--~~----~~~~~~~  217 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.++ ++.     ++.++.|.... +  |-.+.+  .+    ..+..  
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~--   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF--   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH--
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc--
Confidence            68999999999999999999999999999999865 332     23345565432 2  222222  11    11212  


Q ss_pred             CcccEEEeCCCC
Q 020314          218 RKYDAVINCVTG  229 (327)
Q Consensus       218 ~~~d~v~d~~g~  229 (327)
                      +++|+++++.|.
T Consensus        82 g~iDiLVnnAG~   93 (251)
T d1vl8a_          82 GKLDTVVNAAGI   93 (251)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999984

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.85  E-value=0.00051  Score=55.09  Aligned_cols=76  Identities=20%  Similarity=0.192  Sum_probs=48.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC-CcHHHHHhcCCCE--EE--eCCCCC--c----ccccCCCCCcc
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNT--HVTATCGA-RNIELVKSLGADE--VL--DYKTPD--G----AALKSPSGRKY  220 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~-~~~~~~~~lg~~~--v~--~~~~~~--~----~~~~~~~~~~~  220 (327)
                      .++|||+||++|+|.+.++.+...|+  +|+.++++ ++.+.+++.....  ++  |-.+.+  .    .+.+..+..++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            47899999999999998887777786  67777765 5655555443322  22  222221  1    11122233458


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |+++++.|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999984

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.0013  Score=52.40  Aligned_cols=75  Identities=20%  Similarity=0.217  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEE---EeCCCCC--cc----cccCCCCCccc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEV---LDYKTPD--GA----ALKSPSGRKYD  221 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v---~~~~~~~--~~----~~~~~~~~~~d  221 (327)
                      +|++++|+||++++|.+.++.+...|++|+.+.++ ++.+ ..++++....   .|-.+.+  .+    ..+..  +++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEF--GEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHT--CSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhccc--CCcc
Confidence            68999999999999999999999999999988865 4443 4455554321   2322222  11    11222  4699


Q ss_pred             EEEeCCCC
Q 020314          222 AVINCVTG  229 (327)
Q Consensus       222 ~v~d~~g~  229 (327)
                      +++++.|.
T Consensus        81 ilVnnAg~   88 (243)
T d1q7ba_          81 ILVNNAGI   88 (243)
T ss_dssp             EEEECCCC
T ss_pred             eehhhhhh
Confidence            99999874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.83  E-value=0.00083  Score=54.65  Aligned_cols=74  Identities=16%  Similarity=0.183  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEE---eCCCCC--cc----cccCCCCCccc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVL---DYKTPD--GA----ALKSPSGRKYD  221 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~---~~~~~~--~~----~~~~~~~~~~d  221 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.++ ++++ ..++++.....   |-.+.+  .+    ..+..  +.+|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~--g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARF--GKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH--SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHh--CCcc
Confidence            68999999999999999999999999999998865 4544 34556544222   222221  11    11212  4589


Q ss_pred             EEEeCCC
Q 020314          222 AVINCVT  228 (327)
Q Consensus       222 ~v~d~~g  228 (327)
                      +++++.|
T Consensus        82 ilvnnAG   88 (276)
T d1bdba_          82 TLIPNAG   88 (276)
T ss_dssp             EEECCCC
T ss_pred             ccccccc
Confidence            9999987

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.83  E-value=0.0021  Score=51.24  Aligned_cols=75  Identities=15%  Similarity=0.190  Sum_probs=51.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-c--HHHHHhcCCCEEE---eCCCCC--cc----cccCCCCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-N--IELVKSLGADEVL---DYKTPD--GA----ALKSPSGRKY  220 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~--~~~~~~lg~~~v~---~~~~~~--~~----~~~~~~~~~~  220 (327)
                      +|+.+||+||++++|.+.++.+...|++|+...+.+ +  .+.++.+|.....   |-.+.+  ..    ..+..  +++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~--G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF--GRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH--SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc--CCC
Confidence            689999999999999999999999999999888543 2  2344667754322   222221  11    11211  469


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |+++++.|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999985

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.79  E-value=0.002  Score=51.19  Aligned_cols=78  Identities=14%  Similarity=0.080  Sum_probs=51.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEE---eCCCCC--cccccC--CCCCcccE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVL---DYKTPD--GAALKS--PSGRKYDA  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~---~~~~~~--~~~~~~--~~~~~~d~  222 (327)
                      -+|+++||+||++++|.+.++.+...|++|+...++ ++.+ ..++++.....   |-.+.+  .+..+.  ..-+++|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            378999999999999999999999999999988865 4443 44556543221   222221  111111  01135999


Q ss_pred             EEeCCCC
Q 020314          223 VINCVTG  229 (327)
Q Consensus       223 v~d~~g~  229 (327)
                      ++++.|.
T Consensus        84 linnAG~   90 (244)
T d1nffa_          84 LVNNAGI   90 (244)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999985

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.0028  Score=50.30  Aligned_cols=76  Identities=16%  Similarity=0.095  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--cc----cccCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--GA----ALKSPSGR  218 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~----~~~~~~~~  218 (327)
                      .|+.+||+||++++|.+.+..+...|++|+.++++ ++++    .++..|.... +  |.++.+  ..    +.+.  -+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~--~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE--IG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH--TC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH--cC
Confidence            78999999999999999988888899999999865 4433    2345554422 2  222222  11    1122  24


Q ss_pred             cccEEEeCCCCC
Q 020314          219 KYDAVINCVTGI  230 (327)
Q Consensus       219 ~~d~v~d~~g~~  230 (327)
                      .+|+++++.|..
T Consensus        84 ~idilinnag~~   95 (244)
T d1yb1a_          84 DVSILVNNAGVV   95 (244)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCceeEeecccc
Confidence            599999999853

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.78  E-value=0.0012  Score=52.89  Aligned_cols=77  Identities=18%  Similarity=0.137  Sum_probs=52.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCC---CC--cccccC--CCCCcccEE
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKT---PD--GAALKS--PSGRKYDAV  223 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~---~~--~~~~~~--~~~~~~d~v  223 (327)
                      +|+.+||+||++++|.+.++.+...|++|+..+++ ++.+ ..++++........+   .+  .+..+.  ..-+++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            78999999999999999999999999999988865 4443 446777654432211   11  111111  011468999


Q ss_pred             EeCCCC
Q 020314          224 INCVTG  229 (327)
Q Consensus       224 ~d~~g~  229 (327)
                      +++.|.
T Consensus        85 VnnAG~   90 (253)
T d1hxha_          85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            999984

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.76  E-value=0.0025  Score=51.20  Aligned_cols=77  Identities=14%  Similarity=0.200  Sum_probs=50.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-----HHHhcCCCEE-E--eCCCCC--cccccC--CCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-----LVKSLGADEV-L--DYKTPD--GAALKS--PSGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-----~~~~lg~~~v-~--~~~~~~--~~~~~~--~~~~~  219 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.++ ++.+     +.+++|.... +  |-.+.+  .+..+.  ..-++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            78999999999999999999999999999999864 3432     2244554422 2  222222  111110  11246


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        88 iDilVnnAg~   97 (260)
T d1h5qa_          88 ISGLIANAGV   97 (260)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEecccccc
Confidence            9999999874

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.0014  Score=52.63  Aligned_cols=75  Identities=20%  Similarity=0.228  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--cc----cccCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--GA----ALKSPSGR  218 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~----~~~~~~~~  218 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.++ ++.+    .+++.|.... +  |-.+++  .+    ..+..  +
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~--g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL--G   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH--S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc--C
Confidence            78999999999999999999999999999998865 3332    3345554432 2  222221  11    11212  3


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      ++|+++++.|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            59999999984

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.74  E-value=0.0016  Score=51.79  Aligned_cols=75  Identities=27%  Similarity=0.316  Sum_probs=52.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH-HHHHhcCCCEEE---eCCCCC--cc----cccCCCCCccc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI-ELVKSLGADEVL---DYKTPD--GA----ALKSPSGRKYD  221 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~-~~~~~lg~~~v~---~~~~~~--~~----~~~~~~~~~~d  221 (327)
                      +|+++||+||++++|.+.++-+...|++|+.+.++ ++. +..++++.....   |-++.+  .+    +.+..  +++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~--g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEF--GRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH--SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHh--CCcc
Confidence            78999999999999999999999999999999865 444 355677765332   222221  11    11111  3589


Q ss_pred             EEEeCCCC
Q 020314          222 AVINCVTG  229 (327)
Q Consensus       222 ~v~d~~g~  229 (327)
                      +++++.|.
T Consensus        82 iLinnAg~   89 (241)
T d2a4ka1          82 GVAHFAGV   89 (241)
T ss_dssp             EEEEGGGG
T ss_pred             Eecccccc
Confidence            99998874

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.74  E-value=0.0018  Score=52.04  Aligned_cols=75  Identities=20%  Similarity=0.192  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--cc----cccCCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--GA----ALKSPSGR  218 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~~----~~~~~~~~  218 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.++ ++.+    .+++.|.... +  |-.+.+  .+    ..+..  +
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF--G   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH--S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh--C
Confidence            78999999999999999999999999999988865 3433    3344554422 2  222221  11    11222  3


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      ++|+++++.|.
T Consensus        82 ~iDilVnnaG~   92 (260)
T d1zema1          82 KIDFLFNNAGY   92 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCeehhhhcc
Confidence            59999999883

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.72  E-value=0.0014  Score=53.69  Aligned_cols=78  Identities=15%  Similarity=0.129  Sum_probs=51.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-----HHHhcCCCE-EEeCCCCCc----ccc--cCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-----LVKSLGADE-VLDYKTPDG----AAL--KSPSGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-----~~~~lg~~~-v~~~~~~~~----~~~--~~~~~~  218 (327)
                      -+|+++||+||++++|.+.++.+...|++|+.+.++ ++.+     +.++.|... .+..+-.+.    ...  .....+
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            478999999999999999999999999999999865 3322     223444443 222222121    111  111235


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      ++|+++++.|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            69999999985

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.68  E-value=0.0024  Score=51.37  Aligned_cols=75  Identities=21%  Similarity=0.228  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-C-cH----HHHHhcCCCEEE---eCCCCC--cc----cccCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-R-NI----ELVKSLGADEVL---DYKTPD--GA----ALKSPSG  217 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~-~~----~~~~~lg~~~v~---~~~~~~--~~----~~~~~~~  217 (327)
                      +|+.+||+||++++|.+.++.+...|++|+.+.+. + +.    +.+++.+.....   |-.+.+  .+    ..+..  
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~--   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF--   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh--
Confidence            78999999999999999998888899999998854 2 22    234456654222   222221  11    11212  


Q ss_pred             CcccEEEeCCCC
Q 020314          218 RKYDAVINCVTG  229 (327)
Q Consensus       218 ~~~d~v~d~~g~  229 (327)
                      +++|+++++.|.
T Consensus        84 G~iDiLVnnAG~   95 (261)
T d1geea_          84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEeecccee
Confidence            369999999984

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.63  E-value=0.002  Score=51.77  Aligned_cols=75  Identities=20%  Similarity=0.158  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCc-----HHHHHhcCCCEE-EeCCCCCc--------ccccCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARN-----IELVKSLGADEV-LDYKTPDG--------AALKSPSG  217 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~-----~~~~~~lg~~~v-~~~~~~~~--------~~~~~~~~  217 (327)
                      .|+++||+||++++|.+.++.+...|++|+..++ +++     .+.+++.|.+.. +..+-.+.        ...+..  
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~--   82 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF--   82 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH--
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc--
Confidence            7899999999999999999999999999998764 322     234456666533 22222221        111222  


Q ss_pred             CcccEEEeCCCC
Q 020314          218 RKYDAVINCVTG  229 (327)
Q Consensus       218 ~~~d~v~d~~g~  229 (327)
                      +++|+++++.|.
T Consensus        83 g~idilinnag~   94 (259)
T d1ja9a_          83 GGLDFVMSNSGM   94 (259)
T ss_dssp             SCEEEEECCCCC
T ss_pred             CCCcEEEecccc
Confidence            359999999985

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.00079  Score=52.09  Aligned_cols=73  Identities=25%  Similarity=0.173  Sum_probs=48.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccc-cCCCCCcccEEEeCCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAAL-KSPSGRKYDAVINCVTG  229 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~-~~~~~~~~d~v~d~~g~  229 (327)
                      .++|+|+||+|.+|..++..+...|.+|++++++ ++.......+.. ++..+-.+.+.+ +..  .++|+||.++|.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~~gD~~d~~~l~~al--~~~d~vi~~~g~   77 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAH-VVVGDVLQAADVDKTV--AGQDAVIVLLGT   77 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSE-EEESCTTSHHHHHHHH--TTCSEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccc-cccccccchhhHHHHh--cCCCEEEEEecc
Confidence            4679999999999999998888889999999964 443322233333 333222222111 112  358999999984

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=96.62  E-value=0.00076  Score=52.89  Aligned_cols=106  Identities=14%  Similarity=0.135  Sum_probs=63.8

Q ss_pred             cCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHh----cCCCEEEe
Q 020314          129 IPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKS----LGADEVLD  203 (327)
Q Consensus       129 ~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~----lg~~~v~~  203 (327)
                      +..+...|+ .+ +..++     ++|++||-.|  .|.|..++.+++. +.+|+++... +..+.+++    .....++.
T Consensus        53 ~~~p~~~a~-ml-~~L~l-----~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~  122 (224)
T d1vbfa_          53 TTALNLGIF-ML-DELDL-----HKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLIL  122 (224)
T ss_dssp             ECCHHHHHH-HH-HHTTC-----CTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEE
T ss_pred             eehhhhHHH-HH-HHhhh-----cccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhccccccccc
Confidence            334444444 33 56677     9999999999  3467777777775 6799999854 33344432    21112221


Q ss_pred             CCCCCcccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEee
Q 020314          204 YKTPDGAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       204 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~  248 (327)
                      .+.  ..-  ......||.|+-+.+-+. ....++.|+++|++|..
T Consensus       123 ~d~--~~g--~~~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         123 GDG--TLG--YEEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             SCG--GGC--CGGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             Cch--hhc--chhhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence            111  111  112346999987665444 55677899999999864

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.61  E-value=0.0035  Score=46.17  Aligned_cols=72  Identities=17%  Similarity=0.284  Sum_probs=49.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC-Cc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA-RN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~-~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      -.+.+|||.| +|.+|.+.++.+...|++ ++++-++ +| .+++++++.. +.++++.. +.+     ..+|+||.|++
T Consensus        22 l~~~~ilviG-aG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~~~~-~~l-----~~~Divi~ats   93 (159)
T d1gpja2          22 LHDKTVLVVG-AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFDELV-DHL-----ARSDVVVSATA   93 (159)
T ss_dssp             CTTCEEEEES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGGGHH-HHH-----HTCSEEEECCS
T ss_pred             cccCeEEEEC-CCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccchhHH-HHh-----ccCCEEEEecC
Confidence            3788999999 699999999999989984 5555565 34 3466787743 33332211 111     24899999998


Q ss_pred             CCc
Q 020314          229 GIP  231 (327)
Q Consensus       229 ~~~  231 (327)
                      .+.
T Consensus        94 s~~   96 (159)
T d1gpja2          94 APH   96 (159)
T ss_dssp             SSS
T ss_pred             CCC
Confidence            654

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.61  E-value=0.0025  Score=52.35  Aligned_cols=75  Identities=19%  Similarity=0.213  Sum_probs=50.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-C---------cHH----HHHhcCCCEEEeCCCCC--cc----cc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-R---------NIE----LVKSLGADEVLDYKTPD--GA----AL  212 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~---------~~~----~~~~lg~~~v~~~~~~~--~~----~~  212 (327)
                      +|+++||+||++++|.+.++.+...|++|+..++. +         ..+    .....+.....+..+.+  .+    ..
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            78999999999999999999999999999987632 1         111    12233444445544433  11    11


Q ss_pred             cCCCCCcccEEEeCCCC
Q 020314          213 KSPSGRKYDAVINCVTG  229 (327)
Q Consensus       213 ~~~~~~~~d~v~d~~g~  229 (327)
                      +.  -+++|+++++.|.
T Consensus        86 ~~--~G~iDiLVnNAGi  100 (302)
T d1gz6a_          86 DT--FGRIDVVVNNAGI  100 (302)
T ss_dssp             HH--TSCCCEEEECCCC
T ss_pred             HH--cCCCCEEEECCcc
Confidence            22  2469999999984

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.61  E-value=0.0042  Score=49.72  Aligned_cols=74  Identities=15%  Similarity=0.176  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEEE---eCCCCC--c----ccccCCCCCc
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEVL---DYKTPD--G----AALKSPSGRK  219 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v~---~~~~~~--~----~~~~~~~~~~  219 (327)
                      |+.+||+||++++|.+.++.+...|++|+.+.++ ++.+    .+++.|.....   |-.+.+  .    +..+..  ++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~--g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY--GP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT--CS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh--CC
Confidence            5678999999999999999988999999988865 3332    33455544322   222222  1    112222  46


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999999984

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.59  E-value=0.0016  Score=52.38  Aligned_cols=77  Identities=16%  Similarity=0.135  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCE-EE--eCCCCC--cccccC---CCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADE-VL--DYKTPD--GAALKS---PSGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~-v~--~~~~~~--~~~~~~---~~~~~  219 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.++ ++++    .+++.+... .+  |-.+.+  .+..+.   ..++.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999999988865 3433    222333322 12  222221  111111   11245


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        87 idilvnnAG~   96 (259)
T d1xq1a_          87 LDILINNLGA   96 (259)
T ss_dssp             CSEEEEECCC
T ss_pred             cccccccccc
Confidence            8999999984

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0018  Score=51.54  Aligned_cols=103  Identities=17%  Similarity=0.096  Sum_probs=64.7

Q ss_pred             HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHH----HHhcCCCEEEeCCCCCccc
Q 020314          137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIEL----VKSLGADEVLDYKTPDGAA  211 (327)
Q Consensus       137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~----~~~lg~~~v~~~~~~~~~~  211 (327)
                      +..+....++     ++|++||=+|+  |.|..+..+++..|++|++++-+ +..+.    ++..|...-+.....+...
T Consensus        22 ~~~l~~~~~l-----~pg~~VLDiGC--G~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~   94 (245)
T d1nkva_          22 YATLGRVLRM-----KPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG   94 (245)
T ss_dssp             HHHHHHHTCC-----CTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred             HHHHHHHcCC-----CCCCEEEEEcC--CCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhh
Confidence            4456678888     89999999984  34566778888889999999844 33333    3345543211111111111


Q ss_pred             ccCCCCCcccEEEeCCC-----CC--cccccccccCCCcEEEee
Q 020314          212 LKSPSGRKYDAVINCVT-----GI--PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g-----~~--~~~~~~~~l~~~G~~v~~  248 (327)
                        ....+.||+|+..-.     +.  .+..+.+.|+|+|+++..
T Consensus        95 --~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~  136 (245)
T d1nkva_          95 --YVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG  136 (245)
T ss_dssp             --CCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred             --ccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence              123467999985322     21  266788899999999764

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.56  E-value=0.0041  Score=49.60  Aligned_cols=77  Identities=17%  Similarity=0.258  Sum_probs=50.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEEE---eCCCCC--cccccC--CCCCcc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEVL---DYKTPD--GAALKS--PSGRKY  220 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v~---~~~~~~--~~~~~~--~~~~~~  220 (327)
                      +++.+||+||++++|.+.++.+...|++|+.+.++ ++.+    .+++.|.....   |-.+.+  .+.++.  ..-+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            68889999999999999999888999999988865 3332    33455544222   222221  111110  112469


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |+++++.|.
T Consensus        89 Dilvnnag~   97 (251)
T d2c07a1          89 DILVNNAGI   97 (251)
T ss_dssp             CEEEECCCC
T ss_pred             eeeeecccc
Confidence            999999885

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.52  E-value=0.0044  Score=49.52  Aligned_cols=77  Identities=14%  Similarity=0.189  Sum_probs=49.2

Q ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCCc-HH----HHHhcCCCEEEeCCCCCc----ccccC--CCCCc
Q 020314          153 QQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGARN-IE----LVKSLGADEVLDYKTPDG----AALKS--PSGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~~~-~~----~~~~lg~~~v~~~~~~~~----~~~~~--~~~~~  219 (327)
                      +|+++||+||+|  ++|.+.++.+...|++|+...++++ .+    ..+..+....+..+-.+.    +.++.  ..-++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            789999999887  8999999888888999987776543 22    223444444443322221    11110  01146


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        87 iDilVnnag~   96 (256)
T d1ulua_          87 LDYLVHAIAF   96 (256)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.50  E-value=0.0025  Score=51.38  Aligned_cols=75  Identities=19%  Similarity=0.220  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC---EEE--eCCCCC--cc----cccCCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD---EVL--DYKTPD--GA----ALKSPSGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~---~v~--~~~~~~--~~----~~~~~~~~~  219 (327)
                      +|+.+||+||++++|.+.++.+...|++|+.+.++ ++.+ .+++++..   ..+  |-.+.+  ..    ..+..  +.
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~   82 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH--GK   82 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc--CC
Confidence            78999999999999999999998999999988865 4443 33444322   222  222221  11    11211  36


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        83 iD~lVnnAG~   92 (268)
T d2bgka1          83 LDIMFGNVGV   92 (268)
T ss_dssp             CCEEEECCCC
T ss_pred             cceecccccc
Confidence            9999999883

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.48  E-value=0.0025  Score=50.27  Aligned_cols=35  Identities=14%  Similarity=0.168  Sum_probs=30.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      +.+|||+||++++|.+.++.+...|++|+.+++.+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~   36 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA   36 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence            34699999999999999999999999999988653

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.48  E-value=0.0053  Score=42.26  Aligned_cols=91  Identities=11%  Similarity=0.044  Sum_probs=61.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc--H-HHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN--I-ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~--~-~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .|++|||.| .|.+|..-++.+...|++|++++....  . .+++. +.-..... ......+     .++++++.+++.
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~-~~i~~~~~-~~~~~dl-----~~~~lv~~at~d   82 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWANE-GMLTLVEG-PFDETLL-----DSCWLAIAATDD   82 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTT-TSCEEEES-SCCGGGG-----TTCSEEEECCSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhc-CCceeecc-CCCHHHh-----CCCcEEeecCCC
Confidence            688999999 799999999999999999998875422  2 23332 22222221 1111111     358999999988


Q ss_pred             Cccc-ccccccCCCcEEEeecCC
Q 020314          230 IPWS-TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       230 ~~~~-~~~~~l~~~G~~v~~g~~  251 (327)
                      +.++ ......++.|.+|.+...
T Consensus        83 ~~~n~~i~~~a~~~~ilVNv~D~  105 (113)
T d1pjqa1          83 DTVNQRVSDAAESRRIFCNVVDA  105 (113)
T ss_dssp             HHHHHHHHHHHHHTTCEEEETTC
T ss_pred             HHHHHHHHHHHHHcCCEEEeCCC
Confidence            7654 555677788888876644

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.44  E-value=0.0032  Score=50.48  Aligned_cols=75  Identities=15%  Similarity=0.184  Sum_probs=49.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC--cHHH-----HHhcCCCEEE---eCCCCC--cc----cccCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR--NIEL-----VKSLGADEVL---DYKTPD--GA----ALKSPS  216 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~--~~~~-----~~~lg~~~v~---~~~~~~--~~----~~~~~~  216 (327)
                      +|+.+||+||++++|.+.++.+...|++|+.+.+.+  +.+.     .+..|.....   |-.+.+  .+    ..+.. 
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM-   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH-
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence            688999999999999999998889999999988542  2221     1234444322   222221  11    11212 


Q ss_pred             CCcccEEEeCCCC
Q 020314          217 GRKYDAVINCVTG  229 (327)
Q Consensus       217 ~~~~d~v~d~~g~  229 (327)
                       +++|+++++.|.
T Consensus        82 -G~iDiLVnnAG~   93 (260)
T d1x1ta1          82 -GRIDILVNNAGI   93 (260)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCcEEEeeccc
Confidence             359999999984

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0023  Score=51.72  Aligned_cols=39  Identities=23%  Similarity=0.293  Sum_probs=34.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE  191 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~  191 (327)
                      +|+++||+||++|+|++.++.+...|++|+.+.++ ++++
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~   52 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQ   52 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            78999999999999999998888899999999965 4443

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.25  E-value=0.002  Score=50.37  Aligned_cols=94  Identities=13%  Similarity=0.152  Sum_probs=54.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHh---CC----CeEEEEecCCc-HHHH---------HhcCCCEEEeCCCCCcccccC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKL---GN----THVTATCGARN-IELV---------KSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~---~g----~~v~~~~~~~~-~~~~---------~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      +++++||..|+  +.|+.++.+++.   .|    .+|+++...++ .+.+         +..+...+.....+....  .
T Consensus        79 ~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~--~  154 (223)
T d1r18a_          79 KPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG--Y  154 (223)
T ss_dssp             CTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC--C
T ss_pred             CCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc--c
Confidence            89999999994  456655555554   34    48999885432 1222         112222222111111111  1


Q ss_pred             CCCCcccEEEeCCCCCc-ccccccccCCCcEEEe-ec
Q 020314          215 PSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVID-FN  249 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~-~g  249 (327)
                      .....||.|+-+.+-+. -...++.|+++|++|. ++
T Consensus       155 ~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pvg  191 (223)
T d1r18a_         155 PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVG  191 (223)
T ss_dssp             GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEES
T ss_pred             ccccceeeEEEEeechhchHHHHHhcCCCcEEEEEEe
Confidence            12346999887666444 5677789999999986 44

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0045  Score=49.16  Aligned_cols=47  Identities=17%  Similarity=0.098  Sum_probs=39.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGAD  199 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~  199 (327)
                      +|+.+||+||++++|.+.++.+...|++|+.+.++ ++.+ .+++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            79999999999999999999999999999998854 4544 45666654

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.23  E-value=0.0042  Score=49.34  Aligned_cols=100  Identities=16%  Similarity=0.130  Sum_probs=63.0

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHHHH----hc-CCCEEEeCCCCCccccc
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIELVK----SL-GADEVLDYKTPDGAALK  213 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~~~----~l-g~~~v~~~~~~~~~~~~  213 (327)
                      ...++     ++|++||=.|+  |.|.++..+|++.|  .+|++++.+ +..+.++    ++ +...+--... +  ..+
T Consensus        79 ~~l~i-----~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~-D--i~~  148 (250)
T d1yb2a1          79 MRCGL-----RPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS-D--IAD  148 (250)
T ss_dssp             --CCC-----CTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS-C--TTT
T ss_pred             HHcCC-----CCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe-e--eec
Confidence            44566     99999999883  44777788888654  589999844 4444443    33 2232211111 1  111


Q ss_pred             CCCCCcccEEEeCCCCC--cccccccccCCCcEEEeecCC
Q 020314          214 SPSGRKYDAVINCVTGI--PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ......||.|+-....+  .+..+.+.|+|+|+++.+.+.
T Consensus       149 ~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P~  188 (250)
T d1yb2a1         149 FISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLPN  188 (250)
T ss_dssp             CCCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred             ccccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEeCC
Confidence            22345699998655543  378888999999999987665

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.20  E-value=0.013  Score=46.95  Aligned_cols=75  Identities=13%  Similarity=0.118  Sum_probs=48.9

Q ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCCc----HH-HHHhcCCCEEEeCCCCC----cc----cccCCCC
Q 020314          153 QQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGARN----IE-LVKSLGADEVLDYKTPD----GA----ALKSPSG  217 (327)
Q Consensus       153 ~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~~~----~~-~~~~lg~~~v~~~~~~~----~~----~~~~~~~  217 (327)
                      +|+++||+||+|  ++|.+.++.+...|++|+.+.++++    .+ +....+...+...+-.+    .+    ..+.  -
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD--L   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH--T
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH--c
Confidence            789999999876  8999999999999999999886543    22 22233333333222221    11    1122  2


Q ss_pred             CcccEEEeCCCC
Q 020314          218 RKYDAVINCVTG  229 (327)
Q Consensus       218 ~~~d~v~d~~g~  229 (327)
                      +.+|+++++.|.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            458999998885

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.19  E-value=0.0042  Score=49.61  Aligned_cols=38  Identities=24%  Similarity=0.231  Sum_probs=32.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcH
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNI  190 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~  190 (327)
                      +|++|||+||++++|.+.+..+...|++|+.+.+ .++.
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~   42 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP   42 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccH
Confidence            6899999999999999999888889999988874 3443

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.0051  Score=48.04  Aligned_cols=93  Identities=13%  Similarity=0.067  Sum_probs=57.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCC-cHH----HHHhcCC-----CEEEeCCCCCcccccCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGAR-NIE----LVKSLGA-----DEVLDYKTPDGAALKSPSGRK  219 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~~-~~~----~~~~lg~-----~~v~~~~~~~~~~~~~~~~~~  219 (327)
                      ++|++||-.|  .|.|..++.+|+..|  .+|+++...+ -.+    .+++.+.     +.+.....+....  ......
T Consensus        75 ~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~--~~~~~~  150 (224)
T d1i1na_          75 HEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG--YAEEAP  150 (224)
T ss_dssp             CTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC--CGGGCC
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc--cchhhh
Confidence            8999999998  456888888888755  4899998542 222    2233222     1111111110111  112346


Q ss_pred             ccEEEeCCCCCc-ccccccccCCCcEEEee
Q 020314          220 YDAVINCVTGIP-WSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       220 ~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~  248 (327)
                      ||.|+.+..-+. ....++.|+++|++|..
T Consensus       151 fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         151 YDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             EEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            999997766444 56788899999999863

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.09  E-value=0.012  Score=46.78  Aligned_cols=72  Identities=18%  Similarity=0.135  Sum_probs=46.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--c----ccccCCCCCccc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--G----AALKSPSGRKYD  221 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~----~~~~~~~~~~~d  221 (327)
                      .+||+||++++|.+.++.+...|++|+...++ ++.+    .+++.|.... +  |-.+.+  .    ...+..  +++|
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~iD   80 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL--GGFD   80 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT--TCCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--CCcc
Confidence            36999999999999998888889999988865 3432    3345554422 2  222221  1    111222  4699


Q ss_pred             EEEeCCCC
Q 020314          222 AVINCVTG  229 (327)
Q Consensus       222 ~v~d~~g~  229 (327)
                      +++++.|.
T Consensus        81 ilVnnAG~   88 (255)
T d1gega_          81 VIVNNAGV   88 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999884

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0049  Score=49.31  Aligned_cols=75  Identities=23%  Similarity=0.228  Sum_probs=50.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHH----HHhcCC-CEEE----eCCCCC--cc----cccCCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIEL----VKSLGA-DEVL----DYKTPD--GA----ALKSPS  216 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~----~~~lg~-~~v~----~~~~~~--~~----~~~~~~  216 (327)
                      +|+.+||+||++++|.+.++.+...|++|+.+.++ ++.+.    +++.+. ..++    |-.+++  .+    ..+.. 
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~-   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH-   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc-
Confidence            68899999999999999999998999999998865 34332    334332 2222    222221  11    12222 


Q ss_pred             CCcccEEEeCCCC
Q 020314          217 GRKYDAVINCVTG  229 (327)
Q Consensus       217 ~~~~d~v~d~~g~  229 (327)
                       +++|+++++.|.
T Consensus        88 -g~iD~lVnnAg~   99 (257)
T d1xg5a_          88 -SGVDICINNAGL   99 (257)
T ss_dssp             -CCCSEEEECCCC
T ss_pred             -CCCCEEEecccc
Confidence             459999999985

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.00  E-value=0.027  Score=40.84  Aligned_cols=103  Identities=16%  Similarity=0.038  Sum_probs=71.8

Q ss_pred             HHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHH-HHHhcCCCEEEeCCCCCcccccC
Q 020314          136 AHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIE-LVKSLGADEVLDYKTPDGAALKS  214 (327)
Q Consensus       136 a~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~  214 (327)
                      .+.++.+..++.    -.|++++|.| =|-+|.-.++-++.+|++|+++..+.-.+ .+.-=|. .+...    .+..  
T Consensus         9 ~~d~i~r~t~~~----laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf-~v~~~----~~a~--   76 (163)
T d1v8ba1           9 LPDGLMRATDFL----ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGF-NVVTL----DEIV--   76 (163)
T ss_dssp             HHHHHHHHHCCC----CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTC-EECCH----HHHT--
T ss_pred             HHHHHHHHhCce----ecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCC-ccCch----hHcc--
Confidence            344555665653    5899999999 89999999999999999999998442222 2221121 22111    1111  


Q ss_pred             CCCCcccEEEeCCCCCc--ccccccccCCCcEEEeecCCch
Q 020314          215 PSGRKYDAVINCVTGIP--WSTFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~~~  253 (327)
                         +..|+++-++|...  -..-++.|+.+..+...|....
T Consensus        77 ---~~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd~  114 (163)
T d1v8ba1          77 ---DKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDD  114 (163)
T ss_dssp             ---TTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTT
T ss_pred             ---ccCcEEEEcCCCCccccHHHHHHhhCCeEEEeccccch
Confidence               34699999999765  4477899999999999997653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.99  E-value=0.011  Score=41.76  Aligned_cols=74  Identities=14%  Similarity=0.040  Sum_probs=52.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH-HhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      +|+|.| .|.+|...++.+...|..|++++. +++.+.+ ++++.. ++..+..+...++..+-..+|.++-+++++.
T Consensus         2 ~IvI~G-~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~   77 (132)
T d1lssa_           2 YIIIAG-IGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTKIKTLEDAGIEDADMYIAVTGKEE   77 (132)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcccchhhhhhcChhhhhhhcccCCcHH
Confidence            489999 699999999999999999999985 4565544 455543 4544444444444444456889998887654

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.0052  Score=49.02  Aligned_cols=38  Identities=18%  Similarity=0.079  Sum_probs=33.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI  190 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~  190 (327)
                      +|+.+||+||++++|.+.++.+...|++|+.+.++ ++.
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~   40 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAG   40 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            58899999999999999999999999999999865 443

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.96  E-value=0.014  Score=46.41  Aligned_cols=78  Identities=18%  Similarity=0.198  Sum_probs=49.8

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCCc-HH----HHHhcCCCEEEeCCCCCc----c--cccCCCCC
Q 020314          152 GQQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGARN-IE----LVKSLGADEVLDYKTPDG----A--ALKSPSGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~~~-~~----~~~~lg~~~v~~~~~~~~----~--~~~~~~~~  218 (327)
                      -+|+++||+||++  ++|.+.+..+...|++|+.+.++++ .+    .....+.......+..+.    .  ........
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            3789999999988  7889999888899999998886533 22    233445444433332221    0  01112234


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      ..|+.+++.+.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            58999988764

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.95  E-value=0.012  Score=47.70  Aligned_cols=100  Identities=7%  Similarity=0.036  Sum_probs=62.4

Q ss_pred             HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH----HHHHhcCCCEEEeCCCCCccc
Q 020314          137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI----ELVKSLGADEVLDYKTPDGAA  211 (327)
Q Consensus       137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~----~~~~~lg~~~v~~~~~~~~~~  211 (327)
                      +.-+.+..++     ++|++||=+| + |.|..+..+|+..|++|++++.+ +..    +.++..|....+.....+.  
T Consensus        50 ~~~~~~~l~l-----~~G~~VLDiG-C-G~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~--  120 (291)
T d1kpia_          50 RKLALDKLNL-----EPGMTLLDIG-C-GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW--  120 (291)
T ss_dssp             HHHHHHTTCC-----CTTCEEEEET-C-TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCG--
T ss_pred             HHHHHHhcCC-----CCCCEEEEec-C-cchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcc--
Confidence            3345567777     9999999999 3 34556788999999999999844 332    3444556543221111111  


Q ss_pred             ccCCCCCcccEEEe-----CCCCC-----------cccccccccCCCcEEEe
Q 020314          212 LKSPSGRKYDAVIN-----CVTGI-----------PWSTFEPNLGTTGKVID  247 (327)
Q Consensus       212 ~~~~~~~~~d~v~d-----~~g~~-----------~~~~~~~~l~~~G~~v~  247 (327)
                       . ...+.||.|+.     .++..           .++.+-+.|+|+|+++.
T Consensus       121 -~-~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l  170 (291)
T d1kpia_         121 -E-EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL  170 (291)
T ss_dssp             -G-GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEE
T ss_pred             -c-ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEE
Confidence             1 11246898864     33321           14456689999999975

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.90  E-value=0.022  Score=45.29  Aligned_cols=78  Identities=15%  Similarity=0.184  Sum_probs=48.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCe-EEEEecC----CcH----HHHHhcCCCEE-E--eCCCCC--cccccC-CC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTH-VTATCGA----RNI----ELVKSLGADEV-L--DYKTPD--GAALKS-PS  216 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~-v~~~~~~----~~~----~~~~~lg~~~v-~--~~~~~~--~~~~~~-~~  216 (327)
                      +|+.++||+||++++|++.++.+...|++ ++.+.++    +..    +.++..|.... +  |-.+.+  .+.... ..
T Consensus         7 ~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           7 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccc
Confidence            78889999999999999999888888985 5555443    221    23345665422 2  222221  111111 12


Q ss_pred             CCcccEEEeCCCC
Q 020314          217 GRKYDAVINCVTG  229 (327)
Q Consensus       217 ~~~~d~v~d~~g~  229 (327)
                      ...+|.++++.|.
T Consensus        87 ~~~i~~vv~~ag~   99 (259)
T d2fr1a1          87 DVPLSAVFHAAAT   99 (259)
T ss_dssp             TSCEEEEEECCCC
T ss_pred             ccccccccccccc
Confidence            2368999999884

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.76  E-value=0.0092  Score=48.35  Aligned_cols=99  Identities=10%  Similarity=-0.005  Sum_probs=61.5

Q ss_pred             HHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCCEEEeCCCCCcccc
Q 020314          138 QALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGADEVLDYKTPDGAAL  212 (327)
Q Consensus       138 ~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~~v~~~~~~~~~~~  212 (327)
                      .-+.+..++     ++|++||=.|  .|.|..++.+|+..|++|++++. ++..+++    ++.|...-+.....+.   
T Consensus        52 ~~~~~~l~l-----~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~---  121 (285)
T d1kpga_          52 DLALGKLGL-----QPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW---  121 (285)
T ss_dssp             HHHHTTTTC-----CTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG---
T ss_pred             HHHHHHcCC-----CCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhh---
Confidence            345567777     9999999998  35678889999999999999984 4444443    3333221111111111   


Q ss_pred             cCCCCCcccEEEe-----CCCCCc----ccccccccCCCcEEEe
Q 020314          213 KSPSGRKYDAVIN-----CVTGIP----WSTFEPNLGTTGKVID  247 (327)
Q Consensus       213 ~~~~~~~~d~v~d-----~~g~~~----~~~~~~~l~~~G~~v~  247 (327)
                      ... ...+|.|+.     .++...    +..+.+.|+|+|+++.
T Consensus       122 ~~~-~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l  164 (285)
T d1kpga_         122 EQF-DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL  164 (285)
T ss_dssp             GGC-CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred             hcc-cccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEE
Confidence            111 245787663     444331    5566679999999975

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.76  E-value=0.0094  Score=47.23  Aligned_cols=75  Identities=20%  Similarity=0.253  Sum_probs=45.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHH---hCCCeEEEEecC-CcHHHH----HhcCCCEEE--eCCCCC--ccccc----CCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAK---LGNTHVTATCGA-RNIELV----KSLGADEVL--DYKTPD--GAALK----SPSGR  218 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~---~~g~~v~~~~~~-~~~~~~----~~lg~~~v~--~~~~~~--~~~~~----~~~~~  218 (327)
                      ++|||+||++|+|++.++.+.   ..|++|+.++++ ++.+.+    +..+...++  |-.+.+  .+..+    .....
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            579999999999999886553   458899999865 443322    222222222  222322  11111    11234


Q ss_pred             cccEEEeCCCC
Q 020314          219 KYDAVINCVTG  229 (327)
Q Consensus       219 ~~d~v~d~~g~  229 (327)
                      .+|+++++.|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            69999999874

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.74  E-value=0.0057  Score=49.33  Aligned_cols=38  Identities=24%  Similarity=0.321  Sum_probs=33.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcH
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNI  190 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~  190 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.++ +++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l   42 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERL   42 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            78999999999999999999999999999999865 443

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.70  E-value=0.006  Score=49.24  Aligned_cols=35  Identities=26%  Similarity=0.294  Sum_probs=32.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +|+++||+||++++|.+.++.+...|++|+.+.++
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~   37 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRN   37 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            78999999999999999999999999999998865

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.69  E-value=0.0043  Score=49.46  Aligned_cols=71  Identities=8%  Similarity=0.065  Sum_probs=45.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH----hcCCCEEEeCCCCC---cccccCCCCCcccEEEeCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK----SLGADEVLDYKTPD---GAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~----~lg~~~v~~~~~~~---~~~~~~~~~~~~d~v~d~~  227 (327)
                      ++||+||++++|++.++.+...|++|+...++ ++.+.++    .+....+.+.++..   .+..+..  +++|+++++.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~--G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY--GQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH--SCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHc--CCCCEEEECC
Confidence            58999999999999998888899999888754 4544443    23333332222111   1122222  3599999887


Q ss_pred             C
Q 020314          228 T  228 (327)
Q Consensus       228 g  228 (327)
                      |
T Consensus        80 g   80 (252)
T d1zmta1          80 I   80 (252)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=95.67  E-value=0.0085  Score=47.85  Aligned_cols=35  Identities=11%  Similarity=0.126  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +|+.+||+||++++|.+.++.+...|++|+.+.++
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~   37 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVS   37 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            68899999999999999999999999999988854

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.011  Score=48.32  Aligned_cols=36  Identities=14%  Similarity=0.066  Sum_probs=33.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -+|+.+||+||++++|.+.++.+...|++|+.+.++
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~   45 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRK   45 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            489999999999999999999999999999999865

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.61  E-value=0.09  Score=39.11  Aligned_cols=95  Identities=9%  Similarity=-0.010  Sum_probs=55.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHH----HHHhcC----CC-EEEeCCCCCcccccCCCCCccc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIE----LVKSLG----AD-EVLDYKTPDGAALKSPSGRKYD  221 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~----~~~~lg----~~-~v~~~~~~~~~~~~~~~~~~~d  221 (327)
                      ++++|+|.| +|+++.+++..+...|+ +++.+.+. ++.+    ++++++    .. .+.+..+.. ......  ..+|
T Consensus        17 ~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~d   92 (182)
T d1vi2a1          17 KGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQ-AFAEAL--ASAD   92 (182)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHH-HHHHHH--HTCS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccccc-chhhhh--cccc
Confidence            678999999 79999999988888898 55555554 3333    233332    11 122222211 111111  2479


Q ss_pred             EEEeCCCCCc-------ccccccccCCCcEEEeecCC
Q 020314          222 AVINCVTGIP-------WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       222 ~v~d~~g~~~-------~~~~~~~l~~~G~~v~~g~~  251 (327)
                      +++||++-..       +..-...+.++..++++-..
T Consensus        93 iiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~  129 (182)
T d1vi2a1          93 ILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYN  129 (182)
T ss_dssp             EEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCS
T ss_pred             eeccccCCccccccchhhhhHHHhhhcchhhHHhhcC
Confidence            9999987321       11223467788888887644

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=95.59  E-value=0.0073  Score=48.05  Aligned_cols=75  Identities=21%  Similarity=0.147  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCC--C-EEE--eCCCCC--c----ccccCCCCCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGA--D-EVL--DYKTPD--G----AALKSPSGRK  219 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~--~-~v~--~~~~~~--~----~~~~~~~~~~  219 (327)
                      +|+.+||+||++++|.+.++.+...|++|+.+.++ ++.+ ..+.++.  . ..+  |-.+.+  .    +..+..  ++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~--G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF--GP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH--SS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh--CC
Confidence            78999999999999999999999999999988865 4443 2334332  1 222  222221  1    111222  36


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        83 iDiLVnnAg~   92 (251)
T d1zk4a1          83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999984

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.56  E-value=0.044  Score=40.47  Aligned_cols=90  Identities=13%  Similarity=0.100  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcC---CCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLG---ADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg---~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      .++++|+|.| +|+++.+++..+...+.+++.+.|+ ++.+ +++.+.   .......+.        ..-..+|++++|
T Consensus        16 ~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~--------~~~~~~diiIN~   86 (171)
T d1p77a1          16 RPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS--------IPLQTYDLVINA   86 (171)
T ss_dssp             CTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG--------CCCSCCSEEEEC
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc--------ccccccceeeec
Confidence            5788999999 7999999888877766688877766 3433 334433   212221111        112458999999


Q ss_pred             CCCCc----ccccccccCCCcEEEeecC
Q 020314          227 VTGIP----WSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       227 ~g~~~----~~~~~~~l~~~G~~v~~g~  250 (327)
                      ++...    .......+.++..++++-.
T Consensus        87 tp~g~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          87 TSAGLSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             CCC-------CCCHHHHHHCSCEEESCC
T ss_pred             ccccccccccchhhhhhcccceeeeeec
Confidence            97432    1122233445556665543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.48  E-value=0.01  Score=46.71  Aligned_cols=36  Identities=19%  Similarity=0.236  Sum_probs=33.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -+|+++||+||++++|.+.++.+...|++|+.+.++
T Consensus         5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~   40 (237)
T d1uzma1           5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG   40 (237)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            488999999999999999999999999999999864

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.48  E-value=0.0083  Score=48.08  Aligned_cols=35  Identities=26%  Similarity=0.229  Sum_probs=32.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +|+.+||+||++++|.+.++.+...|++|+.+.++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~   38 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRH   38 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            78899999999999999999999999999988865

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.45  E-value=0.0087  Score=48.41  Aligned_cols=100  Identities=8%  Similarity=-0.004  Sum_probs=60.5

Q ss_pred             HHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH----HhcCCCEEEeCCCCCccc
Q 020314          137 HQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV----KSLGADEVLDYKTPDGAA  211 (327)
Q Consensus       137 ~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~----~~lg~~~v~~~~~~~~~~  211 (327)
                      +.-+.+..++     ++|++||=.|+ | .|..+..+++..|++|++++.+ +..+++    ++.|....+.....+...
T Consensus        41 ~~~~~~~l~l-----~~g~~VLDiGC-G-~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~~  113 (280)
T d2fk8a1          41 VDLNLDKLDL-----KPGMTLLDIGC-G-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED  113 (280)
T ss_dssp             HHHHHTTSCC-----CTTCEEEEESC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG
T ss_pred             HHHHHHHcCC-----CCCCEEEEecC-C-chHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhhh
Confidence            3445566677     99999999993 4 3345677888889999999844 444433    344433211111111111


Q ss_pred             ccCCCCCcccEEEe-----CCCCCc----ccccccccCCCcEEEe
Q 020314          212 LKSPSGRKYDAVIN-----CVTGIP----WSTFEPNLGTTGKVID  247 (327)
Q Consensus       212 ~~~~~~~~~d~v~d-----~~g~~~----~~~~~~~l~~~G~~v~  247 (327)
                         . ...+|.|+.     .++.+.    ++...++|+|+|+++.
T Consensus       114 ---~-~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i  154 (280)
T d2fk8a1         114 ---F-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV  154 (280)
T ss_dssp             ---C-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred             ---h-ccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEE
Confidence               1 245888863     333321    5566789999999975

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.41  E-value=0.048  Score=39.87  Aligned_cols=86  Identities=15%  Similarity=0.095  Sum_probs=60.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCC-CEEEeCCCCCcccccCCCCCcccEEEeCCCCCc--
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGA-DEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP--  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~-~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~--  231 (327)
                      +|.|.| .|.+|...+..++..|.+|++.+++ ++.+.+++.+. +...+.    .+..     ...|+||-++....  
T Consensus         2 kI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~----~~~~-----~~~DiIilavp~~~~~   71 (165)
T d2f1ka2           2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQD----LSLL-----QTAKIIFLCTPIQLIL   71 (165)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESC----GGGG-----TTCSEEEECSCHHHHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeee----cccc-----cccccccccCcHhhhh
Confidence            478898 7999999888888899999998854 56777777774 333221    1111     35799999887432  


Q ss_pred             --ccccccccCCCcEEEeecCC
Q 020314          232 --WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 --~~~~~~~l~~~G~~v~~g~~  251 (327)
                        ++.....+.++-.+++++..
T Consensus        72 ~vl~~l~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          72 PTLEKLIPHLSPTAIVTDVASV   93 (165)
T ss_dssp             HHHHHHGGGSCTTCEEEECCSC
T ss_pred             hhhhhhhhhcccccceeecccc
Confidence              45555677777777777654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.38  E-value=0.013  Score=43.58  Aligned_cols=97  Identities=18%  Similarity=0.182  Sum_probs=59.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCCCCccc-ccCCCCCcccEEEeCCCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAA-LKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~-~~~~~~~~~d~v~d~~g~~  230 (327)
                      +++|+|.| +|.+|..+++.+...|.+|+++.++ ++.+ +++.++...+.......... ....  ...|.++.+....
T Consensus         2 ~K~IliiG-aG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~i~~~~~~   78 (182)
T d1e5qa1           2 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV--AKHDLVISLIPYT   78 (182)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHH--TTSSEEEECSCGG
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhh--hccceeEeeccch
Confidence            57899999 6999999999888889999888866 4544 44555543333222211111 0101  2367787777644


Q ss_pred             c-ccccccccCCCcEEEeecCCch
Q 020314          231 P-WSTFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       231 ~-~~~~~~~l~~~G~~v~~g~~~~  253 (327)
                      . ......++..+..+++......
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~  102 (182)
T d1e5qa1          79 FHATVIKSAIRQKKHVVTTSYVSP  102 (182)
T ss_dssp             GHHHHHHHHHHHTCEEECSSCCCH
T ss_pred             hhhHHHHHHHhhccceeecccCcH
Confidence            4 4444456666677777765543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.36  E-value=0.0017  Score=51.89  Aligned_cols=90  Identities=14%  Similarity=0.114  Sum_probs=55.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHH----HhcCCC-EEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELV----KSLGAD-EVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~----~~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      ++|++||=.|+ | .|..++.+++ .|++|++++ +++..+.+    +..+.. .++..+.  ...   ...+.||+|+.
T Consensus       119 ~~g~~VLDiGc-G-sG~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~--~~~---~~~~~fD~V~a  190 (254)
T d2nxca1         119 RPGDKVLDLGT-G-SGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSL--EAA---LPFGPFDLLVA  190 (254)
T ss_dssp             CTTCEEEEETC-T-TSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCH--HHH---GGGCCEEEEEE
T ss_pred             CccCEEEEccc-c-hhHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccc--ccc---ccccccchhhh
Confidence            78999999984 3 3666666554 689999998 44444333    334433 2222111  111   12356999997


Q ss_pred             CCCCCc----ccccccccCCCcEEEeec
Q 020314          226 CVTGIP----WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       226 ~~g~~~----~~~~~~~l~~~G~~v~~g  249 (327)
                      +.....    +..+.++|+|+|+++..|
T Consensus       191 ni~~~~l~~l~~~~~~~LkpGG~lilSg  218 (254)
T d2nxca1         191 NLYAELHAALAPRYREALVPGGRALLTG  218 (254)
T ss_dssp             ECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence            654322    456678999999998754

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.30  E-value=0.067  Score=39.60  Aligned_cols=92  Identities=14%  Similarity=0.019  Sum_probs=58.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCC--ccccc-CC----CCCcccEEEeC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPD--GAALK-SP----SGRKYDAVINC  226 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~--~~~~~-~~----~~~~~d~v~d~  226 (327)
                      +++.|.| +|.+|++.+..+...|.+|+..++. ++.+.+++.+..... .....  ..... .+    .-..+|++|-+
T Consensus         2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAE-GPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEE-SSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchh-hhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            5799999 7999999999999999999999865 566666655533221 11111  00000 00    01358999999


Q ss_pred             CCCCc----ccccccccCCCcEEEee
Q 020314          227 VTGIP----WSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       227 ~g~~~----~~~~~~~l~~~G~~v~~  248 (327)
                      +....    +.....++.++..++..
T Consensus        80 v~~~~~~~~~~~i~~~l~~~~~iv~~  105 (184)
T d1bg6a2          80 VPAIHHASIAANIASYISEGQLIILN  105 (184)
T ss_dssp             SCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred             EchhHHHHHHHHhhhccCCCCEEEEe
Confidence            98654    33445577776666654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.28  E-value=0.029  Score=44.16  Aligned_cols=72  Identities=17%  Similarity=0.211  Sum_probs=46.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cC-CcH----HHHHhcCCCEE-E--eCCCCC--cc----cccCCCCCcc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATC-GA-RNI----ELVKSLGADEV-L--DYKTPD--GA----ALKSPSGRKY  220 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~-~~~----~~~~~lg~~~v-~--~~~~~~--~~----~~~~~~~~~~  220 (327)
                      .+||+||++++|++.++.+...|++|+..+ ++ ++.    +.++..|.... +  |-.+.+  .+    ..+..  +++
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~i   80 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW--GTI   80 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS--SCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc--CCC
Confidence            589999999999999999999999998876 33 222    23345554322 2  222221  11    11222  469


Q ss_pred             cEEEeCCCC
Q 020314          221 DAVINCVTG  229 (327)
Q Consensus       221 d~v~d~~g~  229 (327)
                      |+++++.|.
T Consensus        81 DiLVnnAg~   89 (244)
T d1edoa_          81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             Ccccccccc
Confidence            999999984

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.029  Score=46.17  Aligned_cols=104  Identities=16%  Similarity=0.135  Sum_probs=60.4

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEec-CCcHHHHH----hcC-----------CCEEEe
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATCG-ARNIELVK----SLG-----------ADEVLD  203 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~-~~~~~~~~----~lg-----------~~~v~~  203 (327)
                      ...++     ++|++||=.|  .|.|.++..+|+..|  .+|+++.. ++..+.++    .++           .+.+..
T Consensus        92 ~~l~i-----~pG~rVLE~G--tGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~  164 (324)
T d2b25a1          92 SMMDI-----NPGDTVLEAG--SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDF  164 (324)
T ss_dssp             HHHTC-----CTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEE
T ss_pred             HHhCC-----CCCCEEEEec--ccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeE
Confidence            45677     8999999888  356889999999876  48999984 44443332    111           111110


Q ss_pred             CCCCCcccccCCCCCcccEEEeCCCC--CcccccccccCCCcEEEeecCCc
Q 020314          204 YKTPDGAALKSPSGRKYDAVINCVTG--IPWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       204 ~~~~~~~~~~~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      ...+-...........+|.||=-...  ..+..+.+.|+|+|+++.+.+.-
T Consensus       165 ~~~di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~P~i  215 (324)
T d2b25a1         165 IHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVNI  215 (324)
T ss_dssp             EESCTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred             EecchhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEeCCH
Confidence            00000011111223458877643343  24788899999999999876553

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.23  E-value=0.037  Score=42.05  Aligned_cols=69  Identities=20%  Similarity=0.249  Sum_probs=49.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      -.|.+|+|.| .|.+|..+++++...|++|++.+.+ ++.+....++...+ ..+    +++.    ..+|+++=|..+.
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~-~~~----~~~~----~~~DI~iPcA~~~   94 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALE----DVLS----TPCDVFAPCAMGG   94 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGG----GGGG----CCCSEEEECSCSC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccccc-Ccc----cccc----ccceeeecccccc
Confidence            3889999999 8999999999999999999987743 56666777776532 111    1111    3467777655443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.16  E-value=0.024  Score=40.10  Aligned_cols=72  Identities=17%  Similarity=0.098  Sum_probs=45.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHh-CCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccc
Q 020314          156 NILITAASGAVGLYAVQLAKL-GNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWS  233 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~-~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~  233 (327)
                      +|.|.|++|-+|...++.... .+.++++..+. +.......                      .++|+++|++..+...
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~----------------------~~~DvvIDFS~p~~~~   58 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTD----------------------GNTEVVIDFTHPDVVM   58 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHT----------------------TTCSEEEECCCTTTHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhcc----------------------ccCCEEEEcccHHHHH
Confidence            589999999999998887764 56787766532 22222111                      3467888877766655


Q ss_pred             ccccccCCCcEEEeec
Q 020314          234 TFEPNLGTTGKVIDFN  249 (327)
Q Consensus       234 ~~~~~l~~~G~~v~~g  249 (327)
                      ..++.+...|.-+.+|
T Consensus        59 ~~~~~~~~~~~~~ViG   74 (135)
T d1yl7a1          59 GNLEFLIDNGIHAVVG   74 (135)
T ss_dssp             HHHHHHHHTTCEEEEC
T ss_pred             HHHHHHHhcCCCEEEe
Confidence            5555444444444444

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.11  E-value=0.26  Score=35.71  Aligned_cols=94  Identities=20%  Similarity=0.132  Sum_probs=63.4

Q ss_pred             ccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCC
Q 020314          128 GIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYK  205 (327)
Q Consensus       128 ~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~  205 (327)
                      .+||.....+..| +..++.    -.|++|+|.|.+..+|.-+..++...|++|+...+. ..+. ..            
T Consensus        16 ~~PcTp~aI~~lL-~~y~i~----l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~------------   78 (166)
T d1b0aa1          16 LRPCTPRGIVTLL-ERYNID----TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV------------   78 (166)
T ss_dssp             SCCHHHHHHHHHH-HHTTCC----CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH------------
T ss_pred             CCCchHHHHHHHH-HHcCcc----cccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHH------------
Confidence            4455544444455 445553    489999999999999999999999999998755432 2221 11            


Q ss_pred             CCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314          206 TPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                                  +..|+++-++|.+.+- -.+.++++..++++|..
T Consensus        79 ------------~~ADivI~a~G~p~~i-~~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          79 ------------ENADLLIVAVGKPGFI-PGDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             ------------HHCSEEEECSCCTTCB-CTTTSCTTCEEEECCCE
T ss_pred             ------------hhhhHhhhhccCcccc-cccccCCCcEEEecCce
Confidence                        2367888888865522 24567788888888754

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.09  E-value=0.027  Score=44.86  Aligned_cols=102  Identities=12%  Similarity=0.033  Sum_probs=65.1

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEe-cCCcHHHHH----hc---CCCEEEeCCCCCccc
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGN--THVTATC-GARNIELVK----SL---GADEVLDYKTPDGAA  211 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~-~~~~~~~~~----~l---g~~~v~~~~~~~~~~  211 (327)
                      ...++     ++|++||=.|  .|.|.++..+|+..|  .+|++++ +++..+.++    .+   ..+.+..... +...
T Consensus        90 ~~l~i-----~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~-d~~~  161 (264)
T d1i9ga_          90 HEGDI-----FPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS-DLAD  161 (264)
T ss_dssp             HHTTC-----CTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS-CGGG
T ss_pred             HHhCC-----CCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec-cccc
Confidence            56677     8999999887  567888999999875  5899998 445544443    22   1222211111 1111


Q ss_pred             ccCCCCCcccEEEeCCCCC--cccccccccCCCcEEEeecCCc
Q 020314          212 LKSPSGRKYDAVINCVTGI--PWSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~  252 (327)
                       .......+|.||--...+  .+..+.+.|+|+|+++.+-+..
T Consensus       162 -~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~P~i  203 (264)
T d1i9ga_         162 -SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVATV  203 (264)
T ss_dssp             -CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred             -ccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEeCcc
Confidence             112345699877555543  3778889999999999876553

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.08  E-value=0.019  Score=44.50  Aligned_cols=72  Identities=21%  Similarity=0.220  Sum_probs=41.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCe--EEEEecCC-cHHHHHhcCCCEEEeCCCCCc-ccccCCCCCcccEEEeCCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTH--VTATCGAR-NIELVKSLGADEVLDYKTPDG-AALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~--v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~-~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      .+|||+||+|.+|..+++.+...|.+  |+...++. +.+.. .-+.. ++..+-.+. ...+..  +++|.++++.+..
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-~~~~~-~~~~d~~~~~~~~~~~--~~~d~vi~~a~~~   79 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEAD-VFIGDITDADSINPAF--QGIDALVILTSAV   79 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTT-EEECCTTSHHHHHHHH--TTCSEEEECCCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-cCCcE-EEEeeecccccccccc--ccceeeEEEEeec
Confidence            57999999999999999999888864  44445442 22221 11222 222222221 111111  3589999988743

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.018  Score=44.90  Aligned_cols=73  Identities=23%  Similarity=0.262  Sum_probs=44.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCC-c--HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT--HVTATCGAR-N--IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~~-~--~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~  227 (327)
                      ++++|||+||+|-+|...++.+...|.  +|+++++.. +  ....+.+.. .+.|..+.+ ......  .++|+++.|.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~-~~~D~~~~~-~~~~~~--~~~d~vi~~~   88 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQ-EVVDFEKLD-DYASAF--QGHDVGFCCL   88 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEE-EECCGGGGG-GGGGGG--SSCSEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeee-eeecccccc-cccccc--cccccccccc
Confidence            456899999999999999988877675  788888642 2  111121111 112222211 122212  4589999998


Q ss_pred             CC
Q 020314          228 TG  229 (327)
Q Consensus       228 g~  229 (327)
                      |.
T Consensus        89 ~~   90 (232)
T d2bkaa1          89 GT   90 (232)
T ss_dssp             CC
T ss_pred             cc
Confidence            85

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.01  E-value=0.036  Score=39.94  Aligned_cols=33  Identities=24%  Similarity=0.296  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .|++|||.| +|.+|..-+..+...|++|++++.
T Consensus        12 ~gkrvLViG-gG~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIG-GGEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEE-ESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC
Confidence            789999999 599999999999999999998863

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.28  Score=35.79  Aligned_cols=96  Identities=18%  Similarity=0.159  Sum_probs=65.3

Q ss_pred             cccCchHHHHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCC
Q 020314          127 AGIPCAGLTAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYK  205 (327)
Q Consensus       127 a~~~~~~~ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~  205 (327)
                      +.+||.....+..| +..++.    -.|++|+|.|.+..+|.-+..++...|++|+...+. ..... .-          
T Consensus        17 ~~~PcTp~aii~lL-~~~~i~----l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~-~~----------   80 (170)
T d1a4ia1          17 CFIPCTPKGCLELI-KETGVP----IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE-EV----------   80 (170)
T ss_dssp             CCCCHHHHHHHHHH-HTTTCC----CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH-HH----------
T ss_pred             CCCCChHHHHHHHH-HHhCcc----cccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH-HH----------
Confidence            44565555555555 445553    489999999999999999999999999999977643 22221 11          


Q ss_pred             CCCcccccCCCCCcccEEEeCCCCCcccccccccCCCcEEEeecCC
Q 020314          206 TPDGAALKSPSGRKYDAVINCVTGIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       206 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                                  +..|+++-++|.+.+- -.+.++++-.++++|..
T Consensus        81 ------------~~aDivi~a~G~~~~i-~~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          81 ------------NKGDILVVATGQPEMV-KGEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             ------------TTCSEEEECCCCTTCB-CGGGSCTTCEEEECCCB
T ss_pred             ------------hhccchhhcccccccc-ccccccCCCeEeccCcc
Confidence                        2367777777766532 24577788888888754

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=94.99  E-value=0.017  Score=45.17  Aligned_cols=90  Identities=19%  Similarity=0.244  Sum_probs=60.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC--
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT--  228 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g--  228 (327)
                      .++.+||=.| +| .|..+..+++ .|++|++++. +...+.+++.+....+..+..+   +. ...+.+|+|+....  
T Consensus        41 ~~~~~vLDiG-cG-~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~---l~-~~~~~fD~ii~~~~~~  113 (246)
T d2avna1          41 KNPCRVLDLG-GG-TGKWSLFLQE-RGFEVVLVDPSKEMLEVAREKGVKNVVEAKAED---LP-FPSGAFEAVLALGDVL  113 (246)
T ss_dssp             CSCCEEEEET-CT-TCHHHHHHHT-TTCEEEEEESCHHHHHHHHHHTCSCEEECCTTS---CC-SCTTCEEEEEECSSHH
T ss_pred             CCCCEEEEEC-CC-Cchhcccccc-cceEEEEeecccccccccccccccccccccccc---cc-cccccccceeeecchh
Confidence            5777899888 34 7888888887 4889999994 4667777776666555433322   11 12357999886433  


Q ss_pred             ----CC--cccccccccCCCcEEEee
Q 020314          229 ----GI--PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       229 ----~~--~~~~~~~~l~~~G~~v~~  248 (327)
                          ++  .+..+.++|++||.++..
T Consensus       114 ~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         114 SYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             HHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence                11  155677899999988754

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.95  E-value=0.027  Score=40.58  Aligned_cols=93  Identities=14%  Similarity=0.159  Sum_probs=62.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEe-cC--CcH-HHHHhcCCCEEEeCCCCCcc----cc-----------
Q 020314          154 QKNILITAASGAVGLYAVQLAKLG--NTHVTATC-GA--RNI-ELVKSLGADEVLDYKTPDGA----AL-----------  212 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~-~~--~~~-~~~~~lg~~~v~~~~~~~~~----~~-----------  212 (327)
                      .++|.|.|++|.+|.-+.++.+..  ..+|++.+ ..  +.+ +.++++.+..+...++....    ..           
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            378999999999999999999976  36888887 33  233 46678988887655433210    00           


Q ss_pred             ---cCCCCCcccEEEeCCCCCc-ccccccccCCCcEEE
Q 020314          213 ---KSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVI  246 (327)
Q Consensus       213 ---~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v  246 (327)
                         .......+|+++.+..+.. +...+..++.+-++.
T Consensus        82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~ia  119 (150)
T d1r0ka2          82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVA  119 (150)
T ss_dssp             HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEE
T ss_pred             cchheecccccceeeeecCchhHHHHHHHHHhcCCEEE
Confidence               0012235789998876554 777777777665544

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.94  E-value=0.076  Score=39.45  Aligned_cols=35  Identities=26%  Similarity=0.217  Sum_probs=31.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ..+++|+|.| +|+.|+.++..+...|.+|+.....
T Consensus        41 ~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~   75 (179)
T d1ps9a3          41 VQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAH   75 (179)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEecc
Confidence            5778999999 7999999999999999999998843

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.021  Score=46.78  Aligned_cols=32  Identities=31%  Similarity=0.332  Sum_probs=28.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      ++|||+||+|-+|..++..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            57999999999999999888888999999874

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.021  Score=46.14  Aligned_cols=74  Identities=19%  Similarity=0.214  Sum_probs=43.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEe---cC-CcH----HHHHhcC---CC-EEE--eCCCCC--cccccCCCCCc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATC---GA-RNI----ELVKSLG---AD-EVL--DYKTPD--GAALKSPSGRK  219 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~---~~-~~~----~~~~~lg---~~-~v~--~~~~~~--~~~~~~~~~~~  219 (327)
                      .|||+||++|+|.+.++.+...|++++.+.   ++ ++.    +.++.+.   .. ..+  |-.+.+  ....+....+.
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~   83 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR   83 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence            478999999999999988888998755443   32 222    1223332   22 222  222222  12222333357


Q ss_pred             ccEEEeCCCC
Q 020314          220 YDAVINCVTG  229 (327)
Q Consensus       220 ~d~v~d~~g~  229 (327)
                      +|+++++.|.
T Consensus        84 idilvnnag~   93 (285)
T d1jtva_          84 VDVLVCNAGL   93 (285)
T ss_dssp             CSEEEECCCC
T ss_pred             hhhhhhcccc
Confidence            9999999874

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=94.92  E-value=0.015  Score=45.49  Aligned_cols=33  Identities=18%  Similarity=0.123  Sum_probs=29.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++||+||++++|.+.++.+...|++|+.+.+.
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~   34 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLR   34 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            579999999999999999999999999998854

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.89  E-value=0.023  Score=44.24  Aligned_cols=95  Identities=12%  Similarity=0.019  Sum_probs=57.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHh-cCCCE------------EEeCCCCCc-------c
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKS-LGADE------------VLDYKTPDG-------A  210 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~-lg~~~------------v~~~~~~~~-------~  210 (327)
                      .++.+||..| +| .|..+..+|+ .|++|++++ +++..+.+++ .+...            .........       .
T Consensus        44 ~~~~rvLd~G-CG-~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~  120 (229)
T d2bzga1          44 KSGLRVFFPL-CG-KAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF  120 (229)
T ss_dssp             CCSCEEEETT-CT-TCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred             CCCCEEEEeC-CC-CcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence            7888999998 44 3788888887 599999998 4455555542 22211            111111110       0


Q ss_pred             cccCCCCCcccEEEeCCCCCc---------ccccccccCCCcEEEeec
Q 020314          211 ALKSPSGRKYDAVINCVTGIP---------WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       211 ~~~~~~~~~~d~v~d~~g~~~---------~~~~~~~l~~~G~~v~~g  249 (327)
                      .+.......+|+|+++..-..         +..+.++|+|+|+++...
T Consensus       121 ~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~  168 (229)
T d2bzga1         121 DLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV  168 (229)
T ss_dssp             GGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence            111123356899998764221         346678999999887553

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=94.79  E-value=0.02  Score=40.44  Aligned_cols=73  Identities=16%  Similarity=0.128  Sum_probs=49.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      +++|.| .|.+|..+++.+...|.+|++++. +++.+.++..+...++ .+..+...+...+=..+|.++-++++.
T Consensus         2 ~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~-gd~~~~~~l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVI-ANATEENELLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEE-CCTTCTTHHHHHTGGGCSEEEECCCSC
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCccee-eecccchhhhccCCccccEEEEEcCch
Confidence            478888 799999999999999999999984 4677777777765433 222222222222223477887777654

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=94.73  E-value=0.024  Score=44.21  Aligned_cols=100  Identities=11%  Similarity=0.151  Sum_probs=61.2

Q ss_pred             HHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH----HhcCCCEEEeCCCCCccccc
Q 020314          139 ALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV----KSLGADEVLDYKTPDGAALK  213 (327)
Q Consensus       139 al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~----~~lg~~~v~~~~~~~~~~~~  213 (327)
                      .+...+++     ++|++||=.|+  |.|..+..+++. +.+|++++-+ .-.+.+    ...+.+.+.-... +.....
T Consensus         7 ~l~~~~~~-----~~~~rILDiGc--GtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~-d~~~~~   77 (234)
T d1xxla_           7 LMIKTAEC-----RAEHRVLDIGA--GAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQG-TAESLP   77 (234)
T ss_dssp             HHHHHHTC-----CTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEEC-BTTBCC
T ss_pred             HHHHHhCC-----CCCCEEEEeCC--cCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhccccccccccccc-cccccc
Confidence            35577788     99999999984  456777777774 6799999844 333333    3444332211111 111111


Q ss_pred             CCCCCcccEEEeCCCC-----C--cccccccccCCCcEEEee
Q 020314          214 SPSGRKYDAVINCVTG-----I--PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       214 ~~~~~~~d~v~d~~g~-----~--~~~~~~~~l~~~G~~v~~  248 (327)
                       ...+.||+|+.+-.-     .  .++.+.+.|+|+|+++..
T Consensus        78 -~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          78 -FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             -SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEE
Confidence             123569999864432     1  266777899999998765

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.62  E-value=0.012  Score=44.43  Aligned_cols=94  Identities=10%  Similarity=-0.037  Sum_probs=55.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhc-CCCEE---------EeCCCCCc--ccccC---C
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSL-GADEV---------LDYKTPDG--AALKS---P  215 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~l-g~~~v---------~~~~~~~~--~~~~~---~  215 (327)
                      .+|.+||..|+  |.|..+..+|+. |++|++++ +++-.+.+++. +....         ........  .....   .
T Consensus        19 ~~~~rvLd~GC--G~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLC--GKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTT--CCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecC--cCCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            79999999994  456788888875 99999998 55555655432 11111         01110000  00000   1


Q ss_pred             CCCcccEEEeCCCCC---------cccccccccCCCcEEEee
Q 020314          216 SGRKYDAVINCVTGI---------PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       216 ~~~~~d~v~d~~g~~---------~~~~~~~~l~~~G~~v~~  248 (327)
                      ....+|.|++...-.         .+..+.++|+++|+++..
T Consensus        96 ~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~  137 (201)
T d1pjza_          96 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  137 (201)
T ss_dssp             HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEE
Confidence            123579988754421         145667799999997654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.61  E-value=0.19  Score=39.14  Aligned_cols=34  Identities=21%  Similarity=0.225  Sum_probs=31.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      -+|.+|+|.| .|.+|..+++++...|++|++++.
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            3889999999 899999999999999999998873

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.60  E-value=0.031  Score=46.27  Aligned_cols=37  Identities=22%  Similarity=0.151  Sum_probs=33.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          151 SGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       151 ~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.+|++|||+||+|-+|...++.+...|.+|++++++
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~   44 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS   44 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCC
Confidence            3789999999999999999998888889999998865

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=94.56  E-value=0.041  Score=43.17  Aligned_cols=72  Identities=17%  Similarity=0.153  Sum_probs=43.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCe-------EEEEecC-CcHH----HHHhcCCCEE-E--eCCCCC--c----ccccC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTH-------VTATCGA-RNIE----LVKSLGADEV-L--DYKTPD--G----AALKS  214 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~-------v~~~~~~-~~~~----~~~~lg~~~v-~--~~~~~~--~----~~~~~  214 (327)
                      .|||+||++++|.+.++.+...|++       |+...++ ++++    .+++.|.... +  |-.+.+  .    +..+.
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3799999999999988888777876       5555554 3333    2234454322 2  222221  1    11222


Q ss_pred             CCCCcccEEEeCCCC
Q 020314          215 PSGRKYDAVINCVTG  229 (327)
Q Consensus       215 ~~~~~~d~v~d~~g~  229 (327)
                      .  +.+|+++++.|.
T Consensus        83 ~--g~iDilvnnAg~   95 (240)
T d2bd0a1          83 Y--GHIDCLVNNAGV   95 (240)
T ss_dssp             T--SCCSEEEECCCC
T ss_pred             c--CCcceeeccccc
Confidence            2  369999999984

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.43  E-value=0.096  Score=34.42  Aligned_cols=69  Identities=10%  Similarity=0.096  Sum_probs=48.0

Q ss_pred             CCCCCeEEEEcCCChHHHHH-HHHHHhCCCeEEEEecC--CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCC
Q 020314          151 SGQQKNILITAASGAVGLYA-VQLAKLGNTHVTATCGA--RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       151 ~~~~~~vlV~g~~g~~G~~~-~~la~~~g~~v~~~~~~--~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~  227 (327)
                      .+..+++.+.| -|++|+.+ +++++..|.+|.+.+..  ...+.+++.|......+..   ...     .+.|+|+-+.
T Consensus         5 ~~~~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~---~~i-----~~~d~vV~S~   75 (96)
T d1p3da1           5 MRRVQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE---EHI-----EGASVVVVSS   75 (96)
T ss_dssp             CTTCCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG---GGG-----TTCSEEEECT
T ss_pred             chhCCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCcc---ccC-----CCCCEEEECC
Confidence            36788999999 89999876 79999999999999854  3455666788753322221   111     2468887666


Q ss_pred             C
Q 020314          228 T  228 (327)
Q Consensus       228 g  228 (327)
                      +
T Consensus        76 A   76 (96)
T d1p3da1          76 A   76 (96)
T ss_dssp             T
T ss_pred             C
Confidence            5

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.41  E-value=0.031  Score=42.20  Aligned_cols=89  Identities=16%  Similarity=-0.009  Sum_probs=58.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-Cc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-IP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~  231 (327)
                      .|++|.|.| .|.+|...++.++.+|++|++.++..+.+.....+....   ... .+++     ...|+|.-+... +.
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~---~~l-~~ll-----~~sD~i~~~~plt~~  117 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRV---STL-QDLL-----FHSDCVTLHCGLNEH  117 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEEC---SSH-HHHH-----HHCSEEEECCCCCTT
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccCcccccchhhhccccc---cch-hhcc-----ccCCEEEEeeccccc
Confidence            688999999 899999999999999999999886543333333332211   110 1122     125777766552 21


Q ss_pred             -----ccccccccCCCcEEEeecCC
Q 020314          232 -----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -----~~~~~~~l~~~G~~v~~g~~  251 (327)
                           -...++.|+++..+|.++..
T Consensus       118 T~~li~~~~l~~mk~~a~lIN~sRG  142 (193)
T d1mx3a1         118 NHHLINDFTVKQMRQGAFLVNTARG  142 (193)
T ss_dssp             CTTSBSHHHHTTSCTTEEEEECSCT
T ss_pred             chhhhhHHHHhccCCCCeEEecCCc
Confidence                 12456788888888877754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.41  E-value=0.052  Score=39.89  Aligned_cols=90  Identities=16%  Similarity=0.020  Sum_probs=62.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC-CcHHHHHhcCCC-EEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNT--HVTATCGA-RNIELVKSLGAD-EVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~-~~~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      +|+|.| .|-+|...+..++..|.  +|++.+++ +.++.+++.+.. ....... .      ......|+|+-|+....
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~-~------~~~~~~dlIila~p~~~   74 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIA-K------VEDFSPDFVMLSSPVRT   74 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGG-G------GGGTCCSEEEECSCHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhh-h------hhccccccccccCCchh
Confidence            699998 89999999988888774  78888854 677888887753 3322111 1      11134799999998543


Q ss_pred             ----ccccccccCCCcEEEeecCCch
Q 020314          232 ----WSTFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       232 ----~~~~~~~l~~~G~~v~~g~~~~  253 (327)
                          +......+.++..+++++....
T Consensus        75 ~~~vl~~l~~~~~~~~ii~d~~s~k~  100 (171)
T d2g5ca2          75 FREIAKKLSYILSEDATVTDQGSVKG  100 (171)
T ss_dssp             HHHHHHHHHHHSCTTCEEEECCSCCT
T ss_pred             hhhhhhhhhccccccccccccccccH
Confidence                4455567788888888876543

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=94.29  E-value=0.033  Score=43.17  Aligned_cols=96  Identities=16%  Similarity=0.133  Sum_probs=59.9

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHH----HhcCCCEE--EeCCCCCcccccC
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELV----KSLGADEV--LDYKTPDGAALKS  214 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~----~~lg~~~v--~~~~~~~~~~~~~  214 (327)
                      +.+++     +++++||=.|+ | .|..+..+++. |++|++++- ++-.+.+    +..+.+.+  ...+.   ..+. 
T Consensus         9 ~~~~l-----~~~~rVLDiGc-G-~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~---~~l~-   76 (231)
T d1vl5a_           9 QIAAL-----KGNEEVLDVAT-G-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA---EQMP-   76 (231)
T ss_dssp             HHHTC-----CSCCEEEEETC-T-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC----CCC-
T ss_pred             HhcCC-----CCcCEEEEecc-c-CcHHHHHHHHh-CCEEEEEECCHHHHhhhhhccccccccccccccccc---cccc-
Confidence            56777     89999999994 3 66666677654 789999984 4333333    34554432  21111   1111 


Q ss_pred             CCCCcccEEEeCCC-----CC--cccccccccCCCcEEEeec
Q 020314          215 PSGRKYDAVINCVT-----GI--PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       215 ~~~~~~d~v~d~~g-----~~--~~~~~~~~l~~~G~~v~~g  249 (327)
                      ...+.||+|+..-.     .+  .+..+.++|+|+|+++...
T Consensus        77 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          77 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            12356999986433     21  2667888999999998753

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=94.24  E-value=0.032  Score=44.03  Aligned_cols=33  Identities=9%  Similarity=0.139  Sum_probs=29.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.|||+||++++|.+.++.+...|++|+.++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~   34 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIR   34 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            358999999999999999999999999988743

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.16  E-value=0.016  Score=45.21  Aligned_cols=95  Identities=7%  Similarity=-0.019  Sum_probs=56.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHHHhcCC---CEEEeCCCCCcccccCCCCCcccEEE-eC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELVKSLGA---DEVLDYKTPDGAALKSPSGRKYDAVI-NC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~~~lg~---~~v~~~~~~~~~~~~~~~~~~~d~v~-d~  226 (327)
                      .+|.+||-+|  .|.|..+..+++..+.+++++. ++.-.+.+++...   ..+..................||.++ |.
T Consensus        52 ~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD~  129 (229)
T d1zx0a1          52 SKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDT  129 (229)
T ss_dssp             TTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred             cCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeecc
Confidence            5788999998  4567788888887767898887 4455555543221   11111111111122223345688874 65


Q ss_pred             CCCC-----------cccccccccCCCcEEEee
Q 020314          227 VTGI-----------PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       227 ~g~~-----------~~~~~~~~l~~~G~~v~~  248 (327)
                      ....           .+..+.+.|+|||+++..
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         130 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            5421           134566799999999764

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=94.05  E-value=0.021  Score=46.09  Aligned_cols=99  Identities=13%  Similarity=-0.008  Sum_probs=60.7

Q ss_pred             HHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHH----HhcCCC---EEEeCCCCCccc
Q 020314          140 LTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELV----KSLGAD---EVLDYKTPDGAA  211 (327)
Q Consensus       140 l~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~----~~lg~~---~v~~~~~~~~~~  211 (327)
                      +.....+     .++.+||=.|+  |.|..+..+++..|++|++++ ++...+.+    +..|..   .+...+..+   
T Consensus        59 l~~~~~l-----~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~---  128 (282)
T d2o57a1          59 LAMTGVL-----QRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE---  128 (282)
T ss_dssp             HHHTTCC-----CTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS---
T ss_pred             HHHhcCC-----CCCCEEEEeCC--CCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccc---
Confidence            3345566     89999999983  356777888888899999998 44333333    344432   122211111   


Q ss_pred             ccCCCCCcccEEEeCCC-----CC--cccccccccCCCcEEEeec
Q 020314          212 LKSPSGRKYDAVINCVT-----GI--PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g-----~~--~~~~~~~~l~~~G~~v~~g  249 (327)
                      +. ...+.||+|+..-.     +.  .+..+.++|+|+|+++...
T Consensus       129 l~-~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         129 IP-CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             CS-SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cc-ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence            11 12356999975332     11  2667778999999988653

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.01  E-value=0.079  Score=39.06  Aligned_cols=97  Identities=10%  Similarity=-0.040  Sum_probs=62.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC-CeEEEEec--C-CcHHHHHhcCCCEEEeCCCCC--ccc--ccCC-----CCCcccE
Q 020314          156 NILITAASGAVGLYAVQLAKLGN-THVTATCG--A-RNIELVKSLGADEVLDYKTPD--GAA--LKSP-----SGRKYDA  222 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~--~-~~~~~~~~lg~~~v~~~~~~~--~~~--~~~~-----~~~~~d~  222 (327)
                      +|.|.| .|.+|...++.+.... .+++++..  + .....+..++.+......+..  ...  ....     .-.++|+
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDv   82 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI   82 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCE
Confidence            689999 8999998888777544 58888863  2 234556666655433221110  000  0000     0136999


Q ss_pred             EEeCCCCCc-ccccccccCCCcEEEeecCCch
Q 020314          223 VINCVTGIP-WSTFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       223 v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~  253 (327)
                      |+||+|.-. .+.+-.++..+-+.|..+.+..
T Consensus        83 ViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          83 IVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             EEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             EEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            999999655 6677778888888888886543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=93.88  E-value=0.028  Score=46.11  Aligned_cols=74  Identities=15%  Similarity=0.130  Sum_probs=45.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEec---CCc---HHHHHhcCCCEEEeCCCCC-cccccCCCCCcccEEEeCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCG---ARN---IELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~---~~~---~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g  228 (327)
                      +|||+||+|-+|...++.+...|.+|+++++   ..+   ...+...+--..+..+-.+ ..+.+...+..+|+||.+.+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            6999999999999999888888999999863   222   2333333332333222111 11111112234799999886


Q ss_pred             C
Q 020314          229 G  229 (327)
Q Consensus       229 ~  229 (327)
                      .
T Consensus        82 ~   82 (338)
T d1orra_          82 Q   82 (338)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=93.66  E-value=0.092  Score=41.55  Aligned_cols=78  Identities=17%  Similarity=0.250  Sum_probs=49.0

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecC-CcH-H-HHHhcCCCE-EE--eCCCCC--c---c-ccc-CCC
Q 020314          152 GQQKNILITAAS--GAVGLYAVQLAKLGNTHVTATCGA-RNI-E-LVKSLGADE-VL--DYKTPD--G---A-ALK-SPS  216 (327)
Q Consensus       152 ~~~~~vlV~g~~--g~~G~~~~~la~~~g~~v~~~~~~-~~~-~-~~~~lg~~~-v~--~~~~~~--~---~-~~~-~~~  216 (327)
                      -+|+++||+||+  .++|.+.++-+...|++|+.+.++ ++. + ..+.++... .+  |-.+++  .   + +.+ ...
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            478999999954  579999998888999999988754 332 2 345565432 22  222211  0   1 111 122


Q ss_pred             CCcccEEEeCCCC
Q 020314          217 GRKYDAVINCVTG  229 (327)
Q Consensus       217 ~~~~d~v~d~~g~  229 (327)
                      ...+|+++++.|.
T Consensus        84 ~~~ld~~i~~ag~   96 (268)
T d2h7ma1          84 GNKLDGVVHSIGF   96 (268)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCCcceeeecccc
Confidence            3458999999883

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.62  E-value=0.056  Score=44.98  Aligned_cols=76  Identities=21%  Similarity=0.136  Sum_probs=46.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      .++-+|||+||+|-+|..++..+...|.+|+++++.+................+-.+ .......  .++|.|+.+.+.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~--~~~d~Vih~a~~   89 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVT--EGVDHVFNLAAD   89 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHH--TTCSEEEECCCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHh--hcCCeEeecccc
Confidence            356689999999999999999999999999998754222111222222222222112 1111111  368999988753

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.60  E-value=0.052  Score=40.47  Aligned_cols=84  Identities=10%  Similarity=0.037  Sum_probs=57.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-Cc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-IP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~  231 (327)
                      .|++|.|.| .|.+|...+++++.+|++|++..+..+..      .....   ..-.+.+     ...|+|+-++.- +.
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~------~~~~~---~~l~ell-----~~sDiv~~~~pl~~~  105 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEG------PWRFT---NSLEEAL-----REARAAVCALPLNKH  105 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCS------SSCCB---SCSHHHH-----TTCSEEEECCCCSTT
T ss_pred             cCceEEEec-cccccccceeeeecccccccccccccccc------ceeee---echhhhh-----hccchhhcccccccc
Confidence            688999999 89999999999999999999998543211      00000   0111222     236888877652 21


Q ss_pred             -----ccccccccCCCcEEEeecCC
Q 020314          232 -----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -----~~~~~~~l~~~G~~v~~g~~  251 (327)
                           -...++.++++..+|.++..
T Consensus       106 t~~li~~~~l~~mk~~ailIN~~RG  130 (181)
T d1qp8a1         106 TRGLVKYQHLALMAEDAVFVNVGRA  130 (181)
T ss_dssp             TTTCBCHHHHTTSCTTCEEEECSCG
T ss_pred             cccccccceeeeccccceEEecccc
Confidence                 23666788999999988754

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.56  E-value=0.051  Score=44.97  Aligned_cols=35  Identities=17%  Similarity=0.155  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++++|||+||+|-+|..+++.+...|.+|+++++.
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~   41 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLT   41 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            67899999999999999999999999999999854

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.40  E-value=0.014  Score=40.98  Aligned_cols=71  Identities=11%  Similarity=0.002  Sum_probs=48.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccccc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWSTF  235 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~  235 (327)
                      +|.|+|++|-+|.+..+++...+.+++...+...                   ...+     ..+|+++|.+..+.....
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~-------------------~~~~-----~~~DVvIDFS~p~~~~~~   57 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG-------------------VEEL-----DSPDVVIDFSSPEALPKT   57 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE-------------------EEEC-----SCCSEEEECSCGGGHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc-------------------HHHh-----ccCCEEEEecCHHHHHHH
Confidence            4899999999999999999988887765542110                   0011     237999999988876666


Q ss_pred             ccccCCCcEEEeecC
Q 020314          236 EPNLGTTGKVIDFNP  250 (327)
Q Consensus       236 ~~~l~~~G~~v~~g~  250 (327)
                      ++.....+.-+.+|.
T Consensus        58 l~~~~~~~~p~ViGT   72 (128)
T d1vm6a3          58 VDLCKKYRAGLVLGT   72 (128)
T ss_dssp             HHHHHHHTCEEEECC
T ss_pred             HHHHHhcCCCEEEEc
Confidence            665555554454553

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.39  E-value=0.23  Score=36.82  Aligned_cols=89  Identities=11%  Similarity=-0.033  Sum_probs=59.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC-CC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT-GI  230 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-~~  230 (327)
                      -.+.++.|.| .|.+|...+++++.+|++|++.++..+.+.....+...    .+. .+++     ...|+|.-++. .+
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~----~~l-~ell-----~~sDiv~~~~Plt~  110 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIEL----LSL-DDLL-----ARADFISVHLPKTP  110 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEE----CCH-HHHH-----HHCSEEEECCCCST
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhcCcee----ccH-HHHH-----hhCCEEEEcCCCCc
Confidence            3678899999 89999999999999999999998654444344443321    110 1122     23688877665 22


Q ss_pred             c----c-cccccccCCCcEEEeecCC
Q 020314          231 P----W-STFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~----~-~~~~~~l~~~G~~v~~g~~  251 (327)
                      .    + ...++.|+++..+|.++..
T Consensus       111 ~T~~lin~~~l~~mk~~a~lIN~sRG  136 (184)
T d1ygya1         111 ETAGLIDKEALAKTKPGVIIVNAARG  136 (184)
T ss_dssp             TTTTCBCHHHHTTSCTTEEEEECSCT
T ss_pred             hhhhhhhHHHHhhhCCCceEEEecch
Confidence            1    2 2566788888888877754

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=93.29  E-value=0.26  Score=35.06  Aligned_cols=51  Identities=14%  Similarity=0.098  Sum_probs=37.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDY  204 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~  204 (327)
                      -++|.|.||.|.+|...+..++..|.+|.+.++.. ........+++.++..
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~   60 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVS   60 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEEC
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccc
Confidence            45799999889999999999999999999998653 3333333444544433

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.24  E-value=0.11  Score=38.51  Aligned_cols=96  Identities=8%  Similarity=0.001  Sum_probs=56.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC--C-cHHHHHhcCCCEEEeCCCCC-cc--cccCCC-----CCcccEE
Q 020314          156 NILITAASGAVGLYAVQLAKLGN-THVTATCGA--R-NIELVKSLGADEVLDYKTPD-GA--ALKSPS-----GRKYDAV  223 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~--~-~~~~~~~lg~~~v~~~~~~~-~~--~~~~~~-----~~~~d~v  223 (327)
                      +|.|.| .|.+|...++.+.... .+++++...  . ....+...+.......+... ..  .+....     ..++|+|
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiV   81 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV   81 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEE
Confidence            588999 8999999999988654 588888632  2 23333444433221111100 00  000000     0258999


Q ss_pred             EeCCCCCc-ccccccccCCCcEEEeecCCc
Q 020314          224 INCVTGIP-WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       224 ~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      +||+|.-. .+.+..+++.+-+++..++..
T Consensus        82 iecTG~f~~~e~a~~hl~~G~KvIi~~~~~  111 (178)
T d1b7go1          82 VDTTPNGVGAQYKPIYLQLQRNAIFQGGEK  111 (178)
T ss_dssp             EECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             EECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence            99999644 556666777766777766543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.21  E-value=0.3  Score=31.37  Aligned_cols=64  Identities=14%  Similarity=0.135  Sum_probs=44.2

Q ss_pred             eEEEEcCCChHHHH-HHHHHHhCCCeEEEEecC--CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          156 NILITAASGAVGLY-AVQLAKLGNTHVTATCGA--RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       156 ~vlV~g~~g~~G~~-~~~la~~~g~~v~~~~~~--~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      +|-+.| -|++|+. ++++++..|+.|.+.+..  +..+.++++|.......+.   +.+     .+.|+|+-+.+
T Consensus         3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~---~~i-----~~~d~vV~SsA   69 (89)
T d1j6ua1           3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSA---DNW-----YDPDLVIKTPA   69 (89)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCT---TSC-----CCCSEEEECTT
T ss_pred             EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeecc---ccc-----CCCCEEEEecC
Confidence            577788 8999985 468888999999999854  3456788999764322211   111     34788886665

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=93.18  E-value=0.051  Score=43.88  Aligned_cols=35  Identities=9%  Similarity=0.087  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASG--AVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g--~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +|+++||+||+|  ++|.+.++.+...|++|+...+.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~   43 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence            789999999876  89999999999999999887754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.15  E-value=0.046  Score=43.33  Aligned_cols=39  Identities=15%  Similarity=0.124  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCChHHHHHHH-HHH--hCCCeEEEEecC-CcHH
Q 020314          153 QQKNILITAASGAVGLYAVQ-LAK--LGNTHVTATCGA-RNIE  191 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~-la~--~~g~~v~~~~~~-~~~~  191 (327)
                      +|+.++|+||++++|.+.++ +|+  ..|++|+.+.++ ++++
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~   47 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLR   47 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHH
Confidence            78889999999999998765 555  368999999865 4443

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.97  E-value=0.092  Score=39.15  Aligned_cols=94  Identities=18%  Similarity=0.115  Sum_probs=55.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHH----HHhcCC-CEEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIEL----VKSLGA-DEVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~----~~~lg~-~~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      +++++||=.|+  |.|..++.+|+. +.+|++++. ++..+.    ++.+|. +.+--...+-....  .....+|.|+.
T Consensus        32 ~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~--~~~~~~D~v~~  106 (186)
T d1l3ia_          32 GKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL--CKIPDIDIAVV  106 (186)
T ss_dssp             CTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH--TTSCCEEEEEE
T ss_pred             CCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcc--cccCCcCEEEE
Confidence            89999998883  445666777765 569999984 444333    345664 22211111111111  12246898886


Q ss_pred             CCCCC----cccccccccCCCcEEEeecC
Q 020314          226 CVTGI----PWSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       226 ~~g~~----~~~~~~~~l~~~G~~v~~g~  250 (327)
                      .-+..    .++.+.+.|+++|+++....
T Consensus       107 ~~~~~~~~~~~~~~~~~LkpgG~lvi~~~  135 (186)
T d1l3ia_         107 GGSGGELQEILRIIKDKLKPGGRIIVTAI  135 (186)
T ss_dssp             SCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             eCccccchHHHHHHHHHhCcCCEEEEEee
Confidence            54432    25566789999999886554

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.94  E-value=0.17  Score=37.09  Aligned_cols=97  Identities=13%  Similarity=0.039  Sum_probs=60.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC-CeEEEEec-C--CcHHHHHhcCCCEEEeCCCCC--ccc--ccCC-----CCCcccE
Q 020314          156 NILITAASGAVGLYAVQLAKLGN-THVTATCG-A--RNIELVKSLGADEVLDYKTPD--GAA--LKSP-----SGRKYDA  222 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~-~--~~~~~~~~lg~~~v~~~~~~~--~~~--~~~~-----~~~~~d~  222 (327)
                      +|.|.| .|.+|..+.+.+...+ .+++++.. .  .....+..++.+......+..  ...  +...     .-.++|+
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv   81 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI   81 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence            689999 8999999999887665 58887763 2  233455566655432221111  000  0000     0135999


Q ss_pred             EEeCCCCCc-ccccccccCCCcEEEeecCCch
Q 020314          223 VINCVTGIP-WSTFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       223 v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~  253 (327)
                      |+||+|.-. .+.+-.++..+-+.|..++...
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~~  113 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKGIKAIFQGGEKH  113 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTTCEEEECTTSCH
T ss_pred             EEEccCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            999999644 5566677877878887776543

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=92.77  E-value=0.061  Score=40.17  Aligned_cols=93  Identities=22%  Similarity=0.246  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEecCC----cHHHH-HhcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGN-THVTATCGAR----NIELV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~~----~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      +.=+|.|.||+|-+|+-.++++..+- .++..+.+.+    +.... ..+.....     ..........-.+.|++|-+
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Dvvf~a   78 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDL-----PNLVAVKDADFSNVDAVFCC   78 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCC-----CCCBCGGGCCGGGCSEEEEC
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCcccccccccccccc-----ccchhhhhhhhcccceeeec
Confidence            34468999999999999999999664 5776665432    22211 11111100     00000011112468999999


Q ss_pred             CCCCcccccccccCCCcEEEeecC
Q 020314          227 VTGIPWSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       227 ~g~~~~~~~~~~l~~~G~~v~~g~  250 (327)
                      .+..........+...+.+++...
T Consensus        79 lp~~~s~~~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          79 LPHGTTQEIIKGLPQELKIVDLSA  102 (183)
T ss_dssp             CSSSHHHHHHHTSCSSCEEEECSS
T ss_pred             cccchHHHHHHHHHhcCcccccch
Confidence            987765555566777788877653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.77  E-value=0.35  Score=33.01  Aligned_cols=35  Identities=26%  Similarity=0.371  Sum_probs=30.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++++|.| +|.+|.-++..++..|.+|+.+.+.
T Consensus        28 ~~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~   62 (121)
T d1d7ya2          28 RPQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQ   62 (121)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             hcCCeEEEEC-cchhHHHHHHHhhcccceEEEEeec
Confidence            6778999999 7999999888889999999998753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=92.72  E-value=0.23  Score=35.51  Aligned_cols=82  Identities=20%  Similarity=0.220  Sum_probs=50.6

Q ss_pred             eEEEEcCCChHHHHHHH-HHHhCCCeEEEEecC-CcHHH-HHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcc
Q 020314          156 NILITAASGAVGLYAVQ-LAKLGNTHVTATCGA-RNIEL-VKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPW  232 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~-la~~~g~~v~~~~~~-~~~~~-~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~  232 (327)
                      +|.+.| .|.+|.+.++ ++++.+.++++..++ ++.+. .+++|... .+..+    ..     ...|+||=|+....+
T Consensus         2 kI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~-~~~~~----~v-----~~~Div~lavkP~~~   70 (152)
T d1yqga2           2 NVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SATLP----EL-----HSDDVLILAVKPQDM   70 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ESSCC----CC-----CTTSEEEECSCHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc-ccccc----cc-----cccceEEEecCHHHH
Confidence            478888 7999998777 555544788887754 55554 45666542 22111    11     236999988875556


Q ss_pred             cccccccCCCcEE-Eee
Q 020314          233 STFEPNLGTTGKV-IDF  248 (327)
Q Consensus       233 ~~~~~~l~~~G~~-v~~  248 (327)
                      ...++-+++.+++ +++
T Consensus        71 ~~v~~~l~~~~~~viS~   87 (152)
T d1yqga2          71 EAACKNIRTNGALVLSV   87 (152)
T ss_dssp             HHHHTTCCCTTCEEEEC
T ss_pred             HHhHHHHhhcccEEeec
Confidence            6666666655544 443

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.62  E-value=0.025  Score=44.47  Aligned_cols=88  Identities=18%  Similarity=0.215  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH----hcCCC-EEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK----SLGAD-EVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~----~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      +++++||=.|+ | .|..+..+++ .|++|++++.+ +-.+.++    ..+.. .++..+-   ..+  .-.+.+|+|+.
T Consensus        40 ~~~~~iLDiGc-G-tG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~---~~l--~~~~~fD~I~~  111 (251)
T d1wzna1          40 REVRRVLDLAC-G-TGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV---LEI--AFKNEFDAVTM  111 (251)
T ss_dssp             SCCCEEEEETC-T-TCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG---GGC--CCCSCEEEEEE
T ss_pred             CCCCEEEEeCC-C-CCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhh---hhc--ccccccchHhh
Confidence            67788999983 4 3777777777 57899999844 3344443    33322 2222111   111  12246999987


Q ss_pred             CCCC----------CcccccccccCCCcEEEe
Q 020314          226 CVTG----------IPWSTFEPNLGTTGKVID  247 (327)
Q Consensus       226 ~~g~----------~~~~~~~~~l~~~G~~v~  247 (327)
                      ..+.          ..++.+.++|+|+|.++.
T Consensus       112 ~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         112 FFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             hhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            5432          125567779999998875

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.59  E-value=0.055  Score=40.13  Aligned_cols=92  Identities=17%  Similarity=0.139  Sum_probs=51.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhc----CCCE--EEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSL----GADE--VLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~l----g~~~--v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      -++++|||.| +|+++.+++..+...| +++.+.|+ +|.+ +...+    ....  .++..+     .. ..-..+|++
T Consensus        16 ~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~dli   87 (177)
T d1nvta1          16 VKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG-----LD-VDLDGVDII   87 (177)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC-----TT-CCCTTCCEE
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhh-----hh-hccchhhhh
Confidence            3788999999 7999998887776555 77766665 4433 22222    2111  011111     00 111358999


Q ss_pred             EeCCCCCcc---c----ccccccCCCcEEEeecCC
Q 020314          224 INCVTGIPW---S----TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       224 ~d~~g~~~~---~----~~~~~l~~~G~~v~~g~~  251 (327)
                      ++|++....   .    .-...+.+...+.++-..
T Consensus        88 In~tp~g~~~~~~~~~~~~~~~~~~~~~v~D~~y~  122 (177)
T d1nvta1          88 INATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYN  122 (177)
T ss_dssp             EECSCTTCTTCCSSCCSSCSTTCCSSSEEEECCCS
T ss_pred             ccCCcccccccccccchhhhhccCcccceeeecCC
Confidence            999874321   1    112344556666666543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.46  E-value=0.13  Score=41.16  Aligned_cols=33  Identities=18%  Similarity=0.157  Sum_probs=30.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      -+|.+|+|.| .|.+|..+++++...|++|++++
T Consensus        34 L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          34 FGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence            3788999999 89999999999999999999886

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.41  E-value=0.093  Score=43.33  Aligned_cols=35  Identities=29%  Similarity=0.385  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.++|+|+||+|-+|..++..+...|.+|++++++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~   36 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHS   36 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECC
Confidence            45679999999999999999998899999999965

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.34  E-value=0.18  Score=34.29  Aligned_cols=35  Identities=17%  Similarity=0.123  Sum_probs=31.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +..++|+|.| +|.+|+-++..+..+|.+|+.+.+.
T Consensus        20 ~~p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~   54 (117)
T d1onfa2          20 KESKKIGIVG-SGYIAVELINVIKRLGIDSYIFARG   54 (117)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred             CCCCEEEEEC-CchHHHHHHHHHHhccccceeeehh
Confidence            5678999999 7999999999999999999999854

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.32  E-value=0.26  Score=35.67  Aligned_cols=89  Identities=11%  Similarity=0.094  Sum_probs=57.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-cc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-WS  233 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~  233 (327)
                      +|-+.| .|.+|...+.-+...|.+|++..++ ++.+.+...+....   ... .+..     ...|+++-|+.... ..
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~---~~~-~e~~-----~~~diii~~v~~~~~~~   72 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAA---RSA-RDAV-----QGADVVISMLPASQHVE   72 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC---SSH-HHHH-----TSCSEEEECCSCHHHHH
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhcccc---chh-hhhc-----cccCeeeecccchhhHH
Confidence            588898 8999998887777789999988855 55666666665422   110 1111     23688888887542 22


Q ss_pred             -------ccccccCCCcEEEeecCCchh
Q 020314          234 -------TFEPNLGTTGKVIDFNPSPRV  254 (327)
Q Consensus       234 -------~~~~~l~~~G~~v~~g~~~~~  254 (327)
                             .....+.++-.+++++.....
T Consensus        73 ~v~~~~~~~~~~l~~g~iiid~st~~p~  100 (162)
T d3cuma2          73 GLYLDDDGLLAHIAPGTLVLECSTIAPT  100 (162)
T ss_dssp             HHHHSTTCHHHHSCTTCEEEECSCCCHH
T ss_pred             HHHhccccccccCCCCCEEEECCCCCHH
Confidence                   234456677777777765433

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.32  E-value=0.12  Score=43.53  Aligned_cols=45  Identities=13%  Similarity=-0.044  Sum_probs=35.6

Q ss_pred             HHHHHHHHhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 020314          135 TAHQALTQSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA  187 (327)
Q Consensus       135 ta~~al~~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~  187 (327)
                      .....+ +..++     ++++++|=.|  .|+|..+.++|+..|+ ++++++-+
T Consensus       204 ~i~~Il-~~l~L-----kpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS  249 (406)
T d1u2za_         204 FLSDVY-QQCQL-----KKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIM  249 (406)
T ss_dssp             HHHHHH-HHTTC-----CTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECC
T ss_pred             HHHHHH-HHhCC-----CCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCC
Confidence            344455 66777     8999888887  5789999999999887 89999843

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.28  E-value=0.087  Score=42.80  Aligned_cols=44  Identities=20%  Similarity=0.264  Sum_probs=34.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC---CcHHHHHhcCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA---RNIELVKSLGA  198 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~---~~~~~~~~lg~  198 (327)
                      ++|||+||+|-+|..++..+...|.+|+++++.   .....++.+..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc
Confidence            479999999999999998888889999999853   23444554543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.24  E-value=0.13  Score=40.72  Aligned_cols=50  Identities=26%  Similarity=0.242  Sum_probs=37.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC----c----HHHHHhcCCCEEEeCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGAR----N----IELVKSLGADEVLDYK  205 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~----~----~~~~~~lg~~~v~~~~  205 (327)
                      +|||+||+|-+|..++..++..|.+|+++++.+    .    .+.++....+.+++..
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a   60 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCA   60 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeec
Confidence            499999999999999999999999999988542    1    1233445666666543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.13  E-value=0.088  Score=39.25  Aligned_cols=34  Identities=9%  Similarity=0.050  Sum_probs=28.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~  187 (327)
                      .+++|+|.| +|+.|+.++..+...|+ .|+++.+.
T Consensus         3 ~~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~   37 (196)
T d1gtea4           3 YSAKIALLG-AGPASISCASFLARLGYSDITIFEKQ   37 (196)
T ss_dssp             GGCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEec
Confidence            367899999 79999999999999998 48777754

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.96  E-value=0.27  Score=33.44  Aligned_cols=35  Identities=0%  Similarity=-0.037  Sum_probs=31.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++|+|.| +|.+|+-.+..+..+|.+|..+.+.
T Consensus        20 ~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~   54 (121)
T d1mo9a2          20 EPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRT   54 (121)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeecc
Confidence            6789999999 7999999999999999999988853

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.90  E-value=0.14  Score=38.76  Aligned_cols=32  Identities=25%  Similarity=0.271  Sum_probs=26.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC--eEEEEec
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNT--HVTATCG  186 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~  186 (327)
                      ++|||+||+|-+|...+..+...|.  +|++..+
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r   36 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR   36 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeC
Confidence            6899999999999999988887776  5555554

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=91.88  E-value=0.017  Score=42.32  Aligned_cols=93  Identities=15%  Similarity=0.068  Sum_probs=50.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHHhcCCCEEEeCCCCC-cccccCCCCCcccEEEeCCCCCcc
Q 020314          156 NILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVKSLGADEVLDYKTPD-GAALKSPSGRKYDAVINCVTGIPW  232 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~~lg~~~v~~~~~~~-~~~~~~~~~~~~d~v~d~~g~~~~  232 (327)
                      +|.|+|++|-+|.+.++++... ++++++... +.....-+.+|...-....... ...... --..+|+++|.+..+..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~-~~~~~DViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDA-VKDDFDVFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTT-TTTSCSEEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHH-HhcccceEEEeccHHHH
Confidence            5899999999999999988865 667776653 2221111111110000000000 000000 11358999999987776


Q ss_pred             cccccccCCCcEEEeec
Q 020314          233 STFEPNLGTTGKVIDFN  249 (327)
Q Consensus       233 ~~~~~~l~~~G~~v~~g  249 (327)
                      ...++.....|.=+.+|
T Consensus        85 ~~~~~~a~~~~~~~ViG  101 (162)
T d1diha1          85 LNHLAFCRQHGKGMVIG  101 (162)
T ss_dssp             HHHHHHHHHTTCEEEEC
T ss_pred             HHHHHHHHhccceeEEe
Confidence            66666555556555555

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=91.84  E-value=0.096  Score=42.06  Aligned_cols=34  Identities=15%  Similarity=0.146  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      -.+|||+||+|-+|...+..+...|.+|++++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~   36 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRP   36 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence            3459999999999999999888889999998864

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.81  E-value=0.77  Score=35.41  Aligned_cols=34  Identities=24%  Similarity=0.255  Sum_probs=29.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHH-hCCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAK-LGNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~-~~g~~v~~~~~  186 (327)
                      -+|.+|+|.| .|.+|..+++++. ..|++++++..
T Consensus        30 l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          30 LKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeeccc
Confidence            3789999999 8999999998764 67999998874

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=91.66  E-value=0.14  Score=41.96  Aligned_cols=31  Identities=19%  Similarity=0.189  Sum_probs=28.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +|||+||+|-+|...+..+...|.+|+++++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~   32 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDN   32 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            4999999999999999999888999999874

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.64  E-value=0.11  Score=41.44  Aligned_cols=33  Identities=24%  Similarity=0.275  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++|+|+| +|..|++++..++..|.+|+++...
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            47899999 7999999999999899999988743

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.59  E-value=0.21  Score=33.84  Aligned_cols=36  Identities=22%  Similarity=0.183  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      +.+++++|.| +|.+|+-+++.+..+|.+|+.+.+.+
T Consensus        20 ~~p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          20 EVPKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hcCCeEEEEC-CCccceeeeeeecccccEEEEEEecc
Confidence            4568899999 79999999999999999999988543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.56  E-value=0.13  Score=40.54  Aligned_cols=32  Identities=13%  Similarity=0.062  Sum_probs=29.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ..||+||++++|.+.++.+...|++|+.+.+.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~   34 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRH   34 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            47999999999999999999999999999854

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.50  E-value=0.14  Score=37.91  Aligned_cols=32  Identities=6%  Similarity=0.041  Sum_probs=28.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +|.|+||+|++|.+.++.+...|.+|+...|+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~   33 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR   33 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            47888889999999999999999999999865

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.48  E-value=0.26  Score=36.73  Aligned_cols=89  Identities=13%  Similarity=0.022  Sum_probs=58.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC-CC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT-GI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-~~  230 (327)
                      .+.++.|.| .|.+|...++.++.+|++|+..++.. .....+..+....   .+. .+.+     +..|+|.-+.. .+
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~---~~l-~~~l-----~~sD~v~~~~plt~  112 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH---ATR-EDMY-----PVCDVVTLNCPLHP  112 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC---SSH-HHHG-----GGCSEEEECSCCCT
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccccccccc---CCH-HHHH-----Hhccchhhcccccc
Confidence            678999999 89999999999999999999998643 3333344332211   110 1111     23677776655 22


Q ss_pred             c-----ccccccccCCCcEEEeecCC
Q 020314          231 P-----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~-----~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .     -...++.|+++..+|.++..
T Consensus       113 ~T~~li~~~~l~~mk~ga~lIN~aRG  138 (188)
T d2naca1         113 ETEHMINDETLKLFKRGAYIVNTARG  138 (188)
T ss_dssp             TTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             cchhhhHHHHHHhCCCCCEEEecCch
Confidence            1     23556788888888777654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.47  E-value=0.072  Score=38.39  Aligned_cols=85  Identities=13%  Similarity=0.114  Sum_probs=59.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCccc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWS  233 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~  233 (327)
                      +|.+.| +|.+|.+.+.-+...|.++++..++ ++.+ +.+++|.....+    ..+..     ...|+||=|+....+.
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~----~~~~~-----~~~dvIilavkp~~~~   71 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMS----HQDLI-----DQVDLVILGIKPQLFE   71 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSS----HHHHH-----HTCSEEEECSCGGGHH
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeech----hhhhh-----hccceeeeecchHhHH
Confidence            377888 8999999888777778889887754 5544 446777543211    11122     2479999998766677


Q ss_pred             ccccccCCCcEEEeecC
Q 020314          234 TFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       234 ~~~~~l~~~G~~v~~g~  250 (327)
                      ..++.++++..++++..
T Consensus        72 ~vl~~l~~~~~iis~~a   88 (152)
T d2ahra2          72 TVLKPLHFKQPIISMAA   88 (152)
T ss_dssp             HHHTTSCCCSCEEECCT
T ss_pred             HHhhhcccceeEecccc
Confidence            78888888888887754

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=91.39  E-value=0.081  Score=43.49  Aligned_cols=72  Identities=14%  Similarity=0.056  Sum_probs=41.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC-CcHHHH-HhcCCCEEEeCC-CCCcccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLGN-THVTATCGA-RNIELV-KSLGADEVLDYK-TPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~-~~~~~~-~~lg~~~v~~~~-~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|||+||+|-+|..+++.+...| .+|+++++. .+.... +.-... .+..+ .......+.. ..++|.|+.+.+-
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~-~i~~Di~~~~~~~~~~-~~~~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEWIEYH-VKKCDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEE-EEECCTTTCSHHHHHH-HHHCSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeE-EEECccCChHHHHHHH-HhCCCcccccccc
Confidence            49999999999999988777777 589988743 332222 211112 22211 1111111111 1358999998874

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=91.37  E-value=0.42  Score=34.19  Aligned_cols=141  Identities=11%  Similarity=0.077  Sum_probs=72.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC---eEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNT---HVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~---~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      |-+|.|.||+|-+|.-.++++..+..   ++...++++..      |...................-...|++|-+.+..
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~------G~~~~~~~~~~~~~~~~~~~~~~~d~~f~~~~~~   74 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSA------GKSLKFKDQDITIEETTETAFEGVDIALFSAGSS   74 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGT------TCEEEETTEEEEEEECCTTTTTTCSEEEECSCHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccc------cccccccCCcccccccchhhhhhhhhhhhccCcc
Confidence            45799999999999999999987742   44444433211      1110000000000011111224578999888855


Q ss_pred             c-ccccccccCCCcEEEeecCCchhH-------HHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeEecceee
Q 020314          231 P-WSTFEPNLGTTGKVIDFNPSPRVL-------LTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKTVIDSKH  302 (327)
Q Consensus       231 ~-~~~~~~~l~~~G~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~  302 (327)
                      . .....+....+-++|+.+...+..       ...+...+. +...+.. ...-....+..+.-+++.|.+++...-.|
T Consensus        75 ~s~~~~~~~~~~~~~VIDlSsdfR~~~~~~~~~pe~n~~~~~-~~~~iIA-nPgC~tt~i~~l~PL~~~~lik~~~~~~~  152 (154)
T d2gz1a1          75 TSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALD-AHNGIIA-CPNAAWNSVQIAETLHERGLVRPTAELKF  152 (154)
T ss_dssp             HHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGG-GCCSEEE-CCCTHHHHHHHHHHHHHTTCCSCCSSCCS
T ss_pred             chhhHHhhhccccceehhcChhhhccCCcccccchhhHHHhc-CcCceEE-CCCCHHHHHHHHHHHHHhcCCCccceeee
Confidence            4 555666777888999987442211       111222211 1112221 11112233444567788888877554443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.27  E-value=0.16  Score=36.84  Aligned_cols=88  Identities=14%  Similarity=0.108  Sum_probs=57.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-cc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-WS  233 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~  233 (327)
                      +|-|.| .|.+|...+.-+...|.+|++..++ ++.+.+.+.+.... ++  . .+..     ...|+||-|+..+. ..
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~-~~--~-~e~~-----~~~d~ii~~v~~~~~v~   71 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETA-ST--A-KAIA-----EQCDVIITMLPNSPHVK   71 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-SS--H-HHHH-----HHCSEEEECCSSHHHHH
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhc-cc--H-HHHH-----hCCCeEEEEcCCHHHHH
Confidence            377888 8999999888777789999988854 56666666665321 11  1 1111     24788998887542 22


Q ss_pred             -------ccccccCCCcEEEeecCCch
Q 020314          234 -------TFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       234 -------~~~~~l~~~G~~v~~g~~~~  253 (327)
                             ..+..++++..+++++....
T Consensus        72 ~v~~~~~~~~~~~~~g~iiid~sT~~p   98 (161)
T d1vpda2          72 EVALGENGIIEGAKPGTVLIDMSSIAP   98 (161)
T ss_dssp             HHHHSTTCHHHHCCTTCEEEECSCCCH
T ss_pred             HHHhCCcchhhccCCCCEEEECCCCCH
Confidence                   24456677777887776543

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=91.20  E-value=0.53  Score=34.20  Aligned_cols=94  Identities=12%  Similarity=0.081  Sum_probs=55.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC---CcHHHHHhcCCC------EEEe--------------CCCCCcccc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA---RNIELVKSLGAD------EVLD--------------YKTPDGAAL  212 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~---~~~~~~~~lg~~------~v~~--------------~~~~~~~~~  212 (327)
                      +|.|.| -|-+|.++.+.+...+.+++++-..   +...++-++...      .+-.              +...+.+.+
T Consensus         2 kigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i   80 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI   80 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred             EEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHHC
Confidence            478999 8999999999888778888887643   233444322211      0100              011111111


Q ss_pred             cCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCC
Q 020314          213 KSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       213 ~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .+ ...++|+|+||+|.-. .+.+..++..+.+-|.+..+
T Consensus        81 ~W-~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  119 (168)
T d2g82a1          81 PW-AEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP  119 (168)
T ss_dssp             CT-GGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             cc-cccCCceeEeccccccchHHhhhhhccccceeeeccc
Confidence            11 1246999999999655 56677777766555555443

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=91.15  E-value=0.07  Score=41.32  Aligned_cols=94  Identities=17%  Similarity=0.124  Sum_probs=58.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcHH----HHHhcCCCEEEeCCCCC-cccc----c-CCCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNIE----LVKSLGADEVLDYKTPD-GAAL----K-SPSGR  218 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~~----~~~~lg~~~v~~~~~~~-~~~~----~-~~~~~  218 (327)
                      .+.++||-.|  +.+|..++.+|+.+  +++++.+... +..+    ..++.|...-+.....+ ...+    . ....+
T Consensus        58 ~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~  135 (227)
T d1susa1          58 INAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG  135 (227)
T ss_dssp             HTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTT
T ss_pred             cCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCC
Confidence            5678899998  67899999999876  4689888844 3333    34456654322221111 1111    1 11235


Q ss_pred             cccEEE-eCCCCC---cccccccccCCCcEEEe
Q 020314          219 KYDAVI-NCVTGI---PWSTFEPNLGTTGKVID  247 (327)
Q Consensus       219 ~~d~v~-d~~g~~---~~~~~~~~l~~~G~~v~  247 (327)
                      .||+|| |+--..   .++.++++|+++|.++.
T Consensus       136 ~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~  168 (227)
T d1susa1         136 SYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGY  168 (227)
T ss_dssp             CBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEE
T ss_pred             ceeEEEeccchhhhHHHHHHHHhhcCCCcEEEE
Confidence            699987 554432   27788899999998874

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.01  E-value=0.26  Score=33.53  Aligned_cols=35  Identities=14%  Similarity=0.082  Sum_probs=31.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.+++++|.| +|.+|+=+++.+..+|.+|..+.+.
T Consensus        20 ~~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~   54 (119)
T d3lada2          20 NVPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAM   54 (119)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEee
Confidence            4568899999 7999999999999999999998854

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=91.00  E-value=0.14  Score=40.65  Aligned_cols=94  Identities=15%  Similarity=0.073  Sum_probs=61.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHHhcCCC-EEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVKSLGAD-EVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      .++.+||=.|+  |.|..+..+++.. +.++++++- +...+.+++.... ..+..+..+   + ......+|+|+....
T Consensus        83 ~~~~~iLDiGc--G~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~---l-~~~~~sfD~v~~~~~  156 (268)
T d1p91a_          83 DKATAVLDIGC--GEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHR---L-PFSDTSMDAIIRIYA  156 (268)
T ss_dssp             TTCCEEEEETC--TTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTS---C-SBCTTCEEEEEEESC
T ss_pred             CCCCEEEEeCC--CCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhh---c-cCCCCCEEEEeecCC
Confidence            57778998883  4567777777765 579999984 4555666543322 222111111   1 122356999997666


Q ss_pred             CCcccccccccCCCcEEEeecCC
Q 020314          229 GIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       229 ~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ...+..+.+.|+|+|.++...+.
T Consensus       157 ~~~~~e~~rvLkpgG~l~~~~p~  179 (268)
T d1p91a_         157 PCKAEELARVVKPGGWVITATPG  179 (268)
T ss_dssp             CCCHHHHHHHEEEEEEEEEEEEC
T ss_pred             HHHHHHHHHHhCCCcEEEEEeeC
Confidence            56688899999999999877543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.93  E-value=0.49  Score=32.32  Aligned_cols=35  Identities=20%  Similarity=0.228  Sum_probs=30.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .++++|+|.| +|.+|+-+++.+..+|.+|+.+.+.
T Consensus        28 ~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~   62 (123)
T d1nhpa2          28 PEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDIL   62 (123)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEec
Confidence            5678999999 7999999999999999999988753

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.88  E-value=0.18  Score=36.08  Aligned_cols=92  Identities=13%  Similarity=0.188  Sum_probs=60.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCC--CeEEEEec-C--CcH-HHHHhcCCCEEEeCCCCCc-------------------
Q 020314          155 KNILITAASGAVGLYAVQLAKLGN--THVTATCG-A--RNI-ELVKSLGADEVLDYKTPDG-------------------  209 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~-~--~~~-~~~~~lg~~~v~~~~~~~~-------------------  209 (327)
                      ++|.|.|++|.+|.-+..+.+...  .+|++.+- .  +.+ +.+.++.+..++-.++...                   
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            369999999999999999999763  58888863 2  232 4557888887765433210                   


Q ss_pred             --ccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEE
Q 020314          210 --AALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVI  246 (327)
Q Consensus       210 --~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v  246 (327)
                        .+.+......+|+++.+..+.. +...+..++.+-++.
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~ia  121 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTIL  121 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEE
Confidence              0011112246899999887655 777777776665543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=90.82  E-value=0.11  Score=41.39  Aligned_cols=33  Identities=15%  Similarity=0.094  Sum_probs=29.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++|||+||+|-+|..++..+...|.+|+++++.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~   36 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRE   36 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECC
Confidence            469999999999999999998889999999853

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.78  E-value=0.93  Score=32.89  Aligned_cols=97  Identities=18%  Similarity=0.093  Sum_probs=60.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCC------EEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGAD------EVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~------~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      -.|++++|.|.+..+|.=+..++...|+.|+...+......  ..+++      .+-+........++ ..-...|+++.
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lk-~~~~~aDIvIs  103 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF--TRGESLKLNKHHVEDLGEYSEDLLK-KCSLDSDVVIT  103 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE--ESCCCSSCCCCEEEEEEECCHHHHH-HHHHHCSEEEE
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccc--ccccceeeeeeccccccccchhHHh-hccccCCEEEE
Confidence            47999999999999999888888889998875543211110  01111      11000000000000 00024799999


Q ss_pred             CCCCCcccccccccCCCcEEEeecCC
Q 020314          226 CVTGIPWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       226 ~~g~~~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ++|.+.+..-.+.++++..++++|..
T Consensus       104 avG~p~~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1         104 GVPSENYKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             CCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             ccCCCccccChhhcccCceEeecccc
Confidence            99988766667789999999999865

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.61  E-value=0.93  Score=33.16  Aligned_cols=86  Identities=8%  Similarity=0.021  Sum_probs=54.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC--Cc-HHHHHhcCCC---EEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLG-NTHVTATCGA--RN-IELVKSLGAD---EVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~--~~-~~~~~~lg~~---~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      ++.|.| .|.+|...++.++.. +.+++++++.  ++ .+.+++++..   .+++  +. .+.++   ...+|+|+-++.
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~--~~-~~ll~---~~~iD~v~I~tp   75 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG--SY-ESLLE---DPEIDALYVPLP   75 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES--SH-HHHHH---CTTCCEEEECCC
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC--cH-HHhhh---ccccceeeeccc
Confidence            478899 799999888877766 5699988743  33 3345666542   2221  10 12222   245899999988


Q ss_pred             CCc-ccccccccCCCcEEEeec
Q 020314          229 GIP-WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       229 ~~~-~~~~~~~l~~~G~~v~~g  249 (327)
                      ... ++.+..++..+=. |.+.
T Consensus        76 ~~~h~~~~~~~l~~g~~-v~~E   96 (184)
T d1ydwa1          76 TSLHVEWAIKAAEKGKH-ILLE   96 (184)
T ss_dssp             GGGHHHHHHHHHTTTCE-EEEC
T ss_pred             chhhcchhhhhhhccce-eecc
Confidence            655 7788888876544 4443

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=90.60  E-value=0.23  Score=35.81  Aligned_cols=93  Identities=15%  Similarity=0.249  Sum_probs=58.3

Q ss_pred             CeEEEEcCCChHHH-HHHHHHHhCC-CeEEEEec-C-C--cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          155 KNILITAASGAVGL-YAVQLAKLGN-THVTATCG-A-R--NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       155 ~~vlV~g~~g~~G~-~~~~la~~~g-~~v~~~~~-~-~--~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      -++.|.| +|.+|. ...++++... .+++++++ + +  ...+++++|.....  ... ....+.....++|+||++++
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~--~~~-d~l~~~~~~~~iDiVf~ATp   80 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY--AGV-EGLIKLPEFADIDFVFDATS   80 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES--SHH-HHHHHSGGGGGEEEEEECSC
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc--cce-eeeeecccccccCEEEEcCC
Confidence            4789999 899987 5678887654 58888874 2 3  24567788865432  111 11122222246999999987


Q ss_pred             CC-ccc--ccccccCCCcEEEeecCC
Q 020314          229 GI-PWS--TFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       229 ~~-~~~--~~~~~l~~~G~~v~~g~~  251 (327)
                      .. ...  .+.+.++.+-.+++....
T Consensus        81 ag~h~~~~~~~~aa~~G~~VID~s~a  106 (157)
T d1nvmb1          81 ASAHVQNEALLRQAKPGIRLIDLTPA  106 (157)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEECSTT
T ss_pred             chhHHHhHHHHHHHHcCCEEEEcccc
Confidence            43 333  445567777788887753

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=90.53  E-value=0.25  Score=36.89  Aligned_cols=89  Identities=12%  Similarity=-0.051  Sum_probs=56.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC-CC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT-GI  230 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-~~  230 (327)
                      .|.++.|+| .|.+|...+++++.+|++++..+... ........+..   ...+. .+.+     ...|+|.-+.. .+
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~---~~~~l-~~ll-----~~sD~v~l~~plt~  115 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQAT---FHDSL-DSLL-----SVSQFFSLNAPSTP  115 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCE---ECSSH-HHHH-----HHCSEEEECCCCCT
T ss_pred             cccceEEee-cccchHHHHHHHHhhccccccccccccccchhhccccc---ccCCH-HHHH-----hhCCeEEecCCCCc
Confidence            478999999 89999999999999999999888542 22222222111   11110 1122     23577776664 22


Q ss_pred             c-----ccccccccCCCcEEEeecCC
Q 020314          231 P-----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       231 ~-----~~~~~~~l~~~G~~v~~g~~  251 (327)
                      .     -...++.|+++..+|.++..
T Consensus       116 ~T~~li~~~~l~~mk~~a~lIN~sRG  141 (191)
T d1gdha1         116 ETRYFFNKATIKSLPQGAIVVNTARG  141 (191)
T ss_dssp             TTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             hHhheecHHHhhCcCCccEEEecCCc
Confidence            1     22666788888888877754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=90.53  E-value=0.38  Score=36.93  Aligned_cols=47  Identities=13%  Similarity=0.068  Sum_probs=37.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHH-HhcCCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELV-KSLGAD  199 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~-~~lg~~  199 (327)
                      -.|.+|+|.| .|.+|..+++++...|+++++++.. .+.+.+ ...|..
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCc
Confidence            3789999999 8999999999999999999988743 444433 455554

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.53  E-value=0.28  Score=33.56  Aligned_cols=35  Identities=20%  Similarity=0.122  Sum_probs=30.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +..++++|+| +|.+|+=+++.+..+|.+|..+.+.
T Consensus        21 ~~p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~   55 (122)
T d1v59a2          21 EIPKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQ   55 (122)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCCeEEEEC-CCchHHHHHHHHHhhCcceeEEEec
Confidence            4557899999 7999999999999999999998854

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.39  E-value=0.95  Score=34.76  Aligned_cols=33  Identities=21%  Similarity=0.313  Sum_probs=28.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHH-HhCCCeEEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLA-KLGNTHVTATC  185 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la-~~~g~~v~~~~  185 (327)
                      -++.+|+|.| .|.+|..+++++ +..|+++++++
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            4788999999 899999998877 56899999886

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.37  E-value=0.35  Score=37.19  Aligned_cols=94  Identities=13%  Similarity=0.006  Sum_probs=57.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC-CcHHHH----HhcCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA-RNIELV----KSLGADEVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~-~~~~~~----~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      ++|++||=.|+  +.|..+..+++..|  .+|++++.+ +..+.+    +..+....+..+.......... ...+|+++
T Consensus        72 ~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~-~~~vD~i~  148 (227)
T d1g8aa_          72 KPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRAL-VPKVDVIF  148 (227)
T ss_dssp             CTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTT-CCCEEEEE
T ss_pred             CCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCccccccc-ccceEEEE
Confidence            89999999984  45888889999875  599999944 443333    2333222222222221111111 24588888


Q ss_pred             eCCCCC-----cccccccccCCCcEEEee
Q 020314          225 NCVTGI-----PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       225 d~~g~~-----~~~~~~~~l~~~G~~v~~  248 (327)
                      ......     .+..+.+.|+++|+++..
T Consensus       149 ~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         149 EDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            655422     256677899999988754

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.29  E-value=0.19  Score=40.67  Aligned_cols=35  Identities=23%  Similarity=0.308  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      .+.++|+|+| +|..|+.++..+...|.+|+++...
T Consensus        28 ~~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          28 SNPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             SSCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCC
Confidence            5677999999 7999999998888889999988744

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.24  E-value=0.21  Score=40.43  Aligned_cols=88  Identities=17%  Similarity=0.191  Sum_probs=48.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCcH----HHHHhcCC-C--EEEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGARNI----ELVKSLGA-D--EVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~~~~----~~~~~lg~-~--~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      .++++||-.| +| .|.+++.+|++ |+ +|+++..++..    +..+..+. +  .++..+-.+   +. .....+|+|
T Consensus        34 ~~~~~VLDiG-cG-~G~lsl~aa~~-Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~---l~-~~~~~~D~I  106 (311)
T d2fyta1          34 FKDKVVLDVG-CG-TGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEE---VH-LPVEKVDVI  106 (311)
T ss_dssp             TTTCEEEEET-CT-TSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTT---SC-CSCSCEEEE
T ss_pred             CCcCEEEEEC-CC-CCHHHHHHHHc-CCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHH---hc-CccccceEE
Confidence            6899999998 34 66777766764 66 89999855432    22223332 2  222221111   11 223579999


Q ss_pred             EeCC-CC----Cc-cccc----ccccCCCcEEE
Q 020314          224 INCV-TG----IP-WSTF----EPNLGTTGKVI  246 (327)
Q Consensus       224 ~d~~-g~----~~-~~~~----~~~l~~~G~~v  246 (327)
                      +... +.    +. +...    -+.|+|+|+++
T Consensus       107 vse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         107 ISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             EECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             EEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            8522 21    21 2222    24799999886

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.24  E-value=0.29  Score=40.12  Aligned_cols=32  Identities=19%  Similarity=0.167  Sum_probs=28.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +.|||+||+|=+|..++..+...|.+|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence            46999999999999999888888999999863

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=90.09  E-value=0.3  Score=36.67  Aligned_cols=87  Identities=14%  Similarity=0.079  Sum_probs=57.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-Cc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-IP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~  231 (327)
                      .|++|.|+| .|.+|...+++++.+|++|++.+...+..... .+..    ... -.+.+     ...|+++-++.. +.
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~-~~~~----~~~-l~~~l-----~~sDii~~~~plt~~  109 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK-KGYY----VDS-LDDLY-----KQADVISLHVPDVPA  109 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH-TTCB----CSC-HHHHH-----HHCSEEEECSCCCGG
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc-ceee----ecc-ccccc-----cccccccccCCcccc
Confidence            688999999 89999999999999999999887544332222 1111    111 01122     136888877652 21


Q ss_pred             -----ccccccccCCCcEEEeecCC
Q 020314          232 -----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -----~~~~~~~l~~~G~~v~~g~~  251 (327)
                           -...++.|+++..+|.++..
T Consensus       110 T~~li~~~~l~~mk~~a~lIN~sRG  134 (197)
T d1j4aa1         110 NVHMINDESIAKMKQDVVIVNVSRG  134 (197)
T ss_dssp             GTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred             ccccccHHHHhhhCCccEEEecCch
Confidence                 23556788888888877654

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=90.07  E-value=0.2  Score=39.19  Aligned_cols=97  Identities=12%  Similarity=0.112  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      +++++||=.|+ |. |..+..+++....+|++++- ++.++.++    ..+...-+.....+........++.||+|+..
T Consensus        23 ~~~~~VLDlGC-G~-G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~  100 (252)
T d1ri5a_          23 KRGDSVLDLGC-GK-GGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ  100 (252)
T ss_dssp             CTTCEEEEETC-TT-TTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred             CCcCEEEEecc-cC-cHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEEEc
Confidence            68899999984 43 55567777765568999994 44445443    33432111111111000111123569999864


Q ss_pred             CCCC-----------cccccccccCCCcEEEeecC
Q 020314          227 VTGI-----------PWSTFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       227 ~g~~-----------~~~~~~~~l~~~G~~v~~g~  250 (327)
                      ..-.           .+..+.++|+|+|.++..-.
T Consensus       101 ~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~~~  135 (252)
T d1ri5a_         101 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP  135 (252)
T ss_dssp             SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ceeeecCCCHHHHHHHHHHHhceeCCCCEEEEEec
Confidence            4321           13445578999999886543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.06  E-value=0.37  Score=32.37  Aligned_cols=33  Identities=15%  Similarity=0.113  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.+|.|.| +|-+|.+.++-|+.+|.++++.+..
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~   43 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRY   43 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCC
Confidence            35699999 7999999999999999999988844

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.06  E-value=0.33  Score=32.81  Aligned_cols=35  Identities=6%  Similarity=-0.030  Sum_probs=30.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +-.++++|.| +|.+|+-+++.++.+|.+|+.+.+.
T Consensus        19 ~~p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~   53 (116)
T d1gesa2          19 ALPERVAVVG-AGYIGVELGGVINGLGAKTHLFEMF   53 (116)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             hCCCEEEEEC-CChhhHHHHHHhhccccEEEEEeec
Confidence            3457899999 7999999999999999999988754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=90.04  E-value=0.23  Score=38.68  Aligned_cols=33  Identities=15%  Similarity=0.154  Sum_probs=29.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      ..++|+|+| +|..|++++..+...|.+|+++.+
T Consensus         3 ~~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er   35 (265)
T d2voua1           3 TTDRIAVVG-GSISGLTAALMLRDAGVDVDVYER   35 (265)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeC
Confidence            457899999 799999999888888999999874

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=89.92  E-value=0.18  Score=40.04  Aligned_cols=30  Identities=17%  Similarity=0.076  Sum_probs=27.2

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          157 ILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +||+||++++|.+.++.+...|++|+...+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~   34 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYH   34 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeC
Confidence            689999999999999999999999998774

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=89.88  E-value=0.049  Score=39.71  Aligned_cols=88  Identities=14%  Similarity=0.044  Sum_probs=51.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC-cHHHHHhcCCC--EEEeC-CCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGAR-NIELVKSLGAD--EVLDY-KTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~-~~~~~~~lg~~--~v~~~-~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      +|+|.| +|.+|.+....+...|.+|..+++.+ +.+.....+.+  ..... .......     -..+|++|-++....
T Consensus         2 kI~IiG-aG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~D~iii~vka~~   75 (167)
T d1ks9a2           2 KITVLG-CGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDF-----LATSDLLLVTLKAWQ   75 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHH-----HHTCSEEEECSCGGG
T ss_pred             EEEEEC-cCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhh-----hcccceEEEeecccc
Confidence            589999 69999998888888899999998653 22211111111  00000 0000011     135899999998765


Q ss_pred             cccc----ccccCCCcEEEeec
Q 020314          232 WSTF----EPNLGTTGKVIDFN  249 (327)
Q Consensus       232 ~~~~----~~~l~~~G~~v~~g  249 (327)
                      ...+    ..++.++..++.+.
T Consensus        76 ~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          76 VSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             HHHHHHHHHTTSCTTSCEEEEC
T ss_pred             hHHHHHhhccccCcccEEeecc
Confidence            4433    34556666677664

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.80  E-value=0.2  Score=40.82  Aligned_cols=32  Identities=25%  Similarity=0.209  Sum_probs=29.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +.+||+||+|-+|..++..+...|.+|+++++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r   33 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIR   33 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEEC
Confidence            46999999999999999999889999999985

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=89.66  E-value=0.69  Score=33.54  Aligned_cols=96  Identities=9%  Similarity=0.043  Sum_probs=56.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-C---cHHHHHhcC-------CCEEEeC-----CCCCccccc-----C
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA-R---NIELVKSLG-------ADEVLDY-----KTPDGAALK-----S  214 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~---~~~~~~~lg-------~~~v~~~-----~~~~~~~~~-----~  214 (327)
                      +|.|.| -|.+|.++.+.+...+.+++++-.+ .   ...++-++-       .+-..+.     +........     .
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            478999 9999999999888778888887542 2   333332221       1111100     000000000     0


Q ss_pred             C--CCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc
Q 020314          215 P--SGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       215 ~--~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .  ...++|+|+||+|-.. .+.+..++..+.+-|.+..+.
T Consensus        81 i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          81 IPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             CCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             CCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence            0  1236999999999655 667778888776666665443

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.66  E-value=0.19  Score=42.02  Aligned_cols=32  Identities=13%  Similarity=0.122  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      |.+|||+||+|=+|..++..+...|.+|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            57899999999999999999988999999986

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.60  E-value=0.33  Score=37.27  Aligned_cols=35  Identities=23%  Similarity=0.234  Sum_probs=31.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.+++|+|.| +|+.|+.++..++..|.+|+.+...
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~   81 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTA   81 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeec
Confidence            6788999999 7999999999999999999988744

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=89.57  E-value=0.23  Score=30.95  Aligned_cols=32  Identities=16%  Similarity=0.074  Sum_probs=28.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++|.|.| +|-.|.+.++-++.+|.++.+.+..
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~   33 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLD   33 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTT
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCC
Confidence            4689999 7999999999999999999988843

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.51  E-value=0.26  Score=39.86  Aligned_cols=35  Identities=23%  Similarity=0.212  Sum_probs=30.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++..+|+|+| +|..|+.++..+...|.+|++....
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6777899999 7999999999999999999988743

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.43  E-value=0.64  Score=35.06  Aligned_cols=94  Identities=18%  Similarity=0.127  Sum_probs=55.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCC-CeEEEEe-cCCcHH----HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGN-THVTATC-GARNIE----LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~-~~~~~~----~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      +||++||=.|++.  |..+..+++..+ .+|++++ +++..+    .++..+-...+..+........ .....+|+++.
T Consensus        55 kpg~~VLDlGcG~--G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~-~~~~~vd~v~~  131 (209)
T d1nt2a_          55 RGDERVLYLGAAS--GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYS-GIVEKVDLIYQ  131 (209)
T ss_dssp             CSSCEEEEETCTT--SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTT-TTCCCEEEEEE
T ss_pred             CCCCEEEEeCCcC--CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccc-cccceEEEEEe
Confidence            8999999999544  557777788765 4899998 444333    3344443222222211111111 11234788876


Q ss_pred             CCCCC-----cccccccccCCCcEEEee
Q 020314          226 CVTGI-----PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       226 ~~g~~-----~~~~~~~~l~~~G~~v~~  248 (327)
                      .....     .+..+.+.|+++|+++..
T Consensus       132 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         132 DIAQKNQIEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccChhhHHHHHHHHHHHhccCCeEEEE
Confidence            54321     255667899999999765

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.41  E-value=0.24  Score=40.46  Aligned_cols=35  Identities=23%  Similarity=0.180  Sum_probs=31.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .+.+++||+||+|-+|...+..+...|.+|+++++
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            35678999999999999999999999999999974

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.26  E-value=0.35  Score=39.49  Aligned_cols=99  Identities=10%  Similarity=0.032  Sum_probs=57.9

Q ss_pred             HhhCCccCCCCCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHH-----------hcCC----CEEEeC
Q 020314          142 QSLGVKLDGSGQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVK-----------SLGA----DEVLDY  204 (327)
Q Consensus       142 ~~~~~~~~~~~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~-----------~lg~----~~v~~~  204 (327)
                      +..++     +++++||=.|  .|.|..+.++|+..++ ++++++ +++..+.++           ..|.    -..+..
T Consensus       145 ~~~~l-----~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~g  217 (328)
T d1nw3a_         145 DEIKM-----TDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG  217 (328)
T ss_dssp             HHSCC-----CTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEC
T ss_pred             HHcCC-----CCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEEC
Confidence            66677     8999998888  5678889999998887 799998 443332222           1221    122222


Q ss_pred             CCCCcccccCCCCCcccEEEeCCC--CC----cccccccccCCCcEEEeec
Q 020314          205 KTPDGAALKSPSGRKYDAVINCVT--GI----PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       205 ~~~~~~~~~~~~~~~~d~v~d~~g--~~----~~~~~~~~l~~~G~~v~~g  249 (327)
                      +-.+.......  ..+|+|+-..-  .+    .+....+.|+|||++|..-
T Consensus       218 d~~~~~~~~~~--~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         218 DFLSEEWRERI--ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             CTTSHHHHHHH--HHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccccccccc--CcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            21110000000  12577764222  11    2566778999999999764

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=89.23  E-value=0.13  Score=38.30  Aligned_cols=33  Identities=24%  Similarity=0.277  Sum_probs=29.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      +++..|+|.| +|+.|+.++..+...|.+|+.+.
T Consensus         3 ~k~~dVvIIG-GGpaGl~AA~~~ar~g~~v~iie   35 (190)
T d1trba1           3 TKHSKLLILG-SGPAGYTAAVYAARANLQPVLIT   35 (190)
T ss_dssp             EEEEEEEEEC-CSHHHHHHHHHHHTTTCCCEEEC
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHcCCceEEEE
Confidence            5677899999 79999999999999999988886

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.21  E-value=0.21  Score=40.86  Aligned_cols=31  Identities=26%  Similarity=0.332  Sum_probs=28.2

Q ss_pred             eE-EEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          156 NI-LITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       156 ~v-lV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +| ||+||+|-+|..++..+...|++|+++++
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r   33 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVR   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            47 99999999999999988888999999985

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.90  E-value=0.44  Score=32.64  Aligned_cols=34  Identities=6%  Similarity=0.041  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ..++++|.| +|.+|+-++..+..+|.+|+.+.+.
T Consensus        21 ~pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~   54 (125)
T d3grsa2          21 LPGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRH   54 (125)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cCCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeec
Confidence            457899999 7999999999999999999998864

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.80  E-value=0.41  Score=33.99  Aligned_cols=35  Identities=11%  Similarity=0.077  Sum_probs=26.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT--HVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~  187 (327)
                      ..+.+|.|.| +|.+|...+..+...+.  +++.++..
T Consensus         4 ~~~~KI~IiG-aG~vG~~~a~~l~~~~l~~el~L~Di~   40 (148)
T d1ldna1           4 NGGARVVVIG-AGFVGASYVFALMNQGIADEIVLIDAN   40 (148)
T ss_dssp             TTSCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEeec
Confidence            4567899999 59999988887776664  67777744

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.47  E-value=0.38  Score=32.89  Aligned_cols=35  Identities=14%  Similarity=0.009  Sum_probs=30.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +..++++|.| +|.+|+=.++.++.+|.+|..+.++
T Consensus        18 ~~P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          18 YCPGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             SCCCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             cCCCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            4567899999 7999999999999999999988754

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=88.30  E-value=2.2  Score=30.76  Aligned_cols=95  Identities=9%  Similarity=0.070  Sum_probs=54.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC----CcHHHHHhcC-------CCEEEe-------C------CCCCcc
Q 020314          156 NILITAASGAVGLYAVQLAKLG-NTHVTATCGA----RNIELVKSLG-------ADEVLD-------Y------KTPDGA  210 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~----~~~~~~~~lg-------~~~v~~-------~------~~~~~~  210 (327)
                      +|.|.| -|.+|.++.+.+... ..+++++-.+    +...++-++-       .+.-.+       .      ...+..
T Consensus         3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~   81 (169)
T d1u8fo1           3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS   81 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCChh
Confidence            588999 999999999877744 4688777542    2333333221       111110       0      001111


Q ss_pred             cccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc
Q 020314          211 ALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       211 ~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      .+.+ ...++|+|+||+|-.. ...+..++..+-+-|.+..+.
T Consensus        82 ~i~W-~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~  123 (169)
T d1u8fo1          82 KIKW-GDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  123 (169)
T ss_dssp             GCCT-TTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             hCCc-cccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence            1111 2357999999999654 556667787776656555443

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.26  E-value=0.5  Score=31.74  Aligned_cols=35  Identities=11%  Similarity=0.153  Sum_probs=30.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.+++++|.| +|.+|+-+++.+..+|.+|+.+.+.
T Consensus        19 ~~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~   53 (115)
T d1lvla2          19 ALPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEAR   53 (115)
T ss_dssp             SCCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHhhcccceEEEeee
Confidence            4458899999 7999999999999999999988753

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=88.25  E-value=0.42  Score=34.43  Aligned_cols=132  Identities=10%  Similarity=0.028  Sum_probs=72.1

Q ss_pred             eEEEEcCCChHHH-HHHHHHHh-CCCeEEEEecC--Cc-HHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCC
Q 020314          156 NILITAASGAVGL-YAVQLAKL-GNTHVTATCGA--RN-IELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGI  230 (327)
Q Consensus       156 ~vlV~g~~g~~G~-~~~~la~~-~g~~v~~~~~~--~~-~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~  230 (327)
                      +|.|.| +|.+|. ..+...+. .+.+++++++.  ++ .+.++.++... .  +. .....     ..+|+|+-|+...
T Consensus         3 ri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~--~~-~~~l~-----~~~D~V~I~tp~~   72 (164)
T d1tlta1           3 RIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-A--DS-LSSLA-----ASCDAVFVHSSTA   72 (164)
T ss_dssp             EEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-C--SS-HHHHH-----TTCSEEEECSCTT
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-c--cc-chhhh-----hhcccccccccch
Confidence            588999 799986 35666664 46789888743  44 34556777542 1  11 11111     2489999988766


Q ss_pred             c-ccccccccCCCcEEEeec----CCchhHHHHhhhhccccceeeE-EEEeCCCHHHHHHHHHHHHCCceeEecc
Q 020314          231 P-WSTFEPNLGTTGKVIDFN----PSPRVLLTFAWKKLTFSKKQLV-PFSVSPKGENLDFLVKLVKEGKLKTVID  299 (327)
Q Consensus       231 ~-~~~~~~~l~~~G~~v~~g----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~~~~  299 (327)
                      . .+.+..++..+=.+ .+.    ..... .........-++..+. ++.....+...+.+.+++++|.+...+.
T Consensus        73 ~h~~~~~~al~~gk~V-~~EKPla~~~~e-~~~l~~~a~~~~~~~~v~~~~r~~~~~~~~~~~~i~~g~ig~~~~  145 (164)
T d1tlta1          73 SHFDVVSTLLNAGVHV-CVDKPLAENLRD-AERLVELAARKKLTLMVGFNRRFFVGCARHFIECVQNQTVPQTAG  145 (164)
T ss_dssp             HHHHHHHHHHHTTCEE-EEESSSCSSHHH-HHHHHHHHHHTTCCEEEECGGGGHHHHHHHHHHHHHHTCCCTTSG
T ss_pred             hcccccccccccccee-eccccccCCHHH-HHHHHHHHHHcCCcEEEEeccccCHHHHHHHHHHHHCCCCCCEEE
Confidence            5 77777777776444 443    22221 1111222222232222 2111223344567778888888765443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.21  E-value=0.23  Score=35.19  Aligned_cols=89  Identities=15%  Similarity=0.046  Sum_probs=52.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC---CCeEEEEecCCcHH-HHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          156 NILITAASGAVGLYAVQLAKLG---NTHVTATCGARNIE-LVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~---g~~v~~~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      +|.|.||+|-+|+-.++++..+   ..++..+.+++... .....+.+..       ........-.++|++|-+.+...
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~-------~~~~~~~~~~~~d~vf~a~p~~~   76 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLR-------VGDVDSFDFSSVGLAFFAAAAEV   76 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEE-------CEEGGGCCGGGCSEEEECSCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccch-------hccchhhhhccceEEEecCCcch
Confidence            5899999999999999998633   35777665432211 0001111110       01111112245899999998665


Q ss_pred             -ccccccccCCCcEEEeecCC
Q 020314          232 -WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -~~~~~~~l~~~G~~v~~g~~  251 (327)
                       ....-.....+.++++.+..
T Consensus        77 s~~~~~~~~~~g~~VID~Ss~   97 (144)
T d2hjsa1          77 SRAHAERARAAGCSVIDLSGA   97 (144)
T ss_dssp             HHHHHHHHHHTTCEEEETTCT
T ss_pred             hhhhccccccCCceEEeechh
Confidence             44444566677788887754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.14  E-value=0.33  Score=33.25  Aligned_cols=35  Identities=20%  Similarity=0.138  Sum_probs=31.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.+++++|.| +|-+|+=+++.+..+|.+|..+.+.
T Consensus        23 ~~p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~   57 (123)
T d1dxla2          23 EIPKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFA   57 (123)
T ss_dssp             SCCSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             ccCCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEc
Confidence            5568899999 7999999999999999999998754

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.03  E-value=0.097  Score=39.39  Aligned_cols=90  Identities=16%  Similarity=0.083  Sum_probs=53.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHH----HHhcCCCEEE-eCCCCCcccccCCCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIEL----VKSLGADEVL-DYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~----~~~lg~~~v~-~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      ++.+||=.| + |.|..+..+++ .|.+|++++-+ +.++.    ++..+.+.+- ...+..    .......||+|+..
T Consensus        30 ~~grvLDiG-c-G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~----~~~~~~~fD~I~~~  102 (198)
T d2i6ga1          30 APGRTLDLG-C-GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLN----TLTFDGEYDFILST  102 (198)
T ss_dssp             CSCEEEEET-C-TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTT----TCCCCCCEEEEEEE
T ss_pred             CCCcEEEEC-C-CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecc----cccccccccEEEEe
Confidence            344899998 4 47888888876 48999999844 43433    3445544321 111110    11112469999863


Q ss_pred             CCC-----C----cccccccccCCCcEEEeec
Q 020314          227 VTG-----I----PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       227 ~g~-----~----~~~~~~~~l~~~G~~v~~g  249 (327)
                      ..-     +    .+..+.++|+++|.++...
T Consensus       103 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1         103 VVMMFLEAQTIPGLIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             SCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             eeeecCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            321     1    2445666899999987653

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=87.84  E-value=1.1  Score=31.86  Aligned_cols=34  Identities=21%  Similarity=0.169  Sum_probs=26.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~  186 (327)
                      ++..+|.|.| +|.+|..++.++...+. +++..+.
T Consensus         5 ~k~~KI~IIG-aG~VG~~lA~~l~~~~~~el~L~D~   39 (154)
T d1pzga1           5 QRRKKVAMIG-SGMIGGTMGYLCALRELADVVLYDV   39 (154)
T ss_dssp             SCCCEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             cCCCcEEEEC-CCHHHHHHHHHHHhCCCceEEEEEe
Confidence            5677899999 59999988877776675 8777763

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=87.82  E-value=0.32  Score=40.11  Aligned_cols=32  Identities=25%  Similarity=0.232  Sum_probs=28.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +.|||+||+|-+|..++..+...|.+|+++++
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r   33 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKR   33 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence            56899999999999999888888999999985

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=87.79  E-value=0.33  Score=36.43  Aligned_cols=86  Identities=17%  Similarity=0.084  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC-Cc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG-IP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~  231 (327)
                      .+++|.|.| .|.+|..++++++.+|++|++.++..+.....  .    +..... .+.+     ...|++.-++.. +.
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~--~----~~~~~l-~~l~-----~~~D~v~~~~plt~~  110 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHP--D----FDYVSL-EDLF-----KQSDVIDLHVPGIEQ  110 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCCT--T----CEECCH-HHHH-----HHCSEEEECCCCCGG
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCccchhhhc--c----hhHHHH-HHHH-----Hhcccceeeeccccc
Confidence            578999999 89999999999999999999988532111000  0    000000 1111     125777665542 21


Q ss_pred             -----ccccccccCCCcEEEeecCC
Q 020314          232 -----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -----~~~~~~~l~~~G~~v~~g~~  251 (327)
                           -...++.|+++..+|.++..
T Consensus       111 T~~li~~~~l~~mk~~a~lIN~aRG  135 (199)
T d1dxya1         111 NTHIINEAAFNLMKPGAIVINTARP  135 (199)
T ss_dssp             GTTSBCHHHHHHSCTTEEEEECSCT
T ss_pred             ccccccHHHhhccCCceEEEecccH
Confidence                 22455678888887777654

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.76  E-value=0.43  Score=36.09  Aligned_cols=90  Identities=19%  Similarity=0.184  Sum_probs=54.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH----hcCCC-EEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK----SLGAD-EVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~----~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      +++.+||=.|+  |.|..+..+++ .|.+|++++. ++..+.++    ..+.. ..+..+..+   +. .....+|+|+.
T Consensus        36 ~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~---l~-~~~~~fD~I~~  108 (226)
T d1ve3a1          36 KKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK---LS-FEDKTFDYVIF  108 (226)
T ss_dssp             CSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS---CC-SCTTCEEEEEE
T ss_pred             CCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhcccccccccccccccc---cc-ccCcCceEEEE
Confidence            67789999984  34777778877 4889999984 44444443    33322 122211111   11 22356999886


Q ss_pred             CCCCC---------cccccccccCCCcEEEee
Q 020314          226 CVTGI---------PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       226 ~~g~~---------~~~~~~~~l~~~G~~v~~  248 (327)
                      ...-.         .+..+.++|+|+|+++..
T Consensus       109 ~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         109 IDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             ESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            43311         255667799999998754

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.72  E-value=0.93  Score=34.71  Aligned_cols=94  Identities=15%  Similarity=-0.015  Sum_probs=54.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEec-CCcHHHHHh----cCCCEEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCG-ARNIELVKS----LGADEVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~-~~~~~~~~~----lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      ++|++||=.|++  .|..+..+++.. +.+|++++- ++..+.++.    .+....+..+......... ....+|+++.
T Consensus        73 kpG~~VLDlGcG--sG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~-~~~~v~~i~~  149 (230)
T d1g8sa_          73 KRDSKILYLGAS--AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYAN-IVEKVDVIYE  149 (230)
T ss_dssp             CTTCEEEEESCC--SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTT-TCCCEEEEEE
T ss_pred             CCCCEEEEeCEE--cCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccccc-ccceeEEeec
Confidence            899999999954  467777778764 359999994 444444432    2222222222222111111 1234667776


Q ss_pred             CCCCCc-----ccccccccCCCcEEEee
Q 020314          226 CVTGIP-----WSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       226 ~~g~~~-----~~~~~~~l~~~G~~v~~  248 (327)
                      ......     +..+.+.|+++|+++..
T Consensus       150 ~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         150 DVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccchHHHHHHHHHHHHhcccCceEEEE
Confidence            554321     55666789999988754

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.63  E-value=0.06  Score=38.52  Aligned_cols=89  Identities=19%  Similarity=0.125  Sum_probs=47.4

Q ss_pred             eEEEEcCCChHHHHHHH-HHHhCC---CeEEEEecCCcH--HHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLYAVQ-LAKLGN---THVTATCGARNI--ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~-la~~~g---~~v~~~~~~~~~--~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|.|.||+|-+|+-.++ ++.+..   .+++...+++..  ..........+.+..  +...     -.++|++|-|++.
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~--~~~~-----~~~~DivF~a~~~   75 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAF--DLEA-----LKALDIIVTCQGG   75 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETT--CHHH-----HHTCSEEEECSCH
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeeccc--chhh-----hhcCcEEEEecCc
Confidence            68999999999999997 455432   366655543221  100000011111110  1111     1358999999987


Q ss_pred             CcccccccccCCCc---EEEeecCC
Q 020314          230 IPWSTFEPNLGTTG---KVIDFNPS  251 (327)
Q Consensus       230 ~~~~~~~~~l~~~G---~~v~~g~~  251 (327)
                      +........+...|   .+++.+..
T Consensus        76 ~~s~~~~~~~~~~g~~~~VID~Ss~  100 (146)
T d1t4ba1          76 DYTNEIYPKLRESGWQGYWIDAASS  100 (146)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred             hHHHHhhHHHHhcCCCeecccCCcc
Confidence            66444444443333   47777643

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=87.47  E-value=0.45  Score=36.65  Aligned_cols=34  Identities=21%  Similarity=0.288  Sum_probs=29.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      +..++|+|+| +|..|++++..+...|.+|.++.+
T Consensus         4 ~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier   37 (268)
T d1c0pa1           4 HSQKRVVVLG-SGVIGLSSALILARKGYSVHILAR   37 (268)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeC
Confidence            3445799999 799999999999999999998874

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=87.39  E-value=0.078  Score=37.92  Aligned_cols=91  Identities=19%  Similarity=0.093  Sum_probs=47.4

Q ss_pred             eEEEEcCCChHHHHHHHHHH-hC---CCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          156 NILITAASGAVGLYAVQLAK-LG---NTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~-~~---g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      +|.|.||+|-+|+-.++++. +.   ..++....+++.....-.++.+........+...     -..+|++|-|++...
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~~~-----~~~~DvvF~alp~~~   76 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIES-----LKQLDAVITCQGGSY   76 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTCHHH-----HTTCSEEEECSCHHH
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccchhh-----hccccEEEEecCchH
Confidence            48899999999999998553 22   3566655543211100011111110000001111     145899999998765


Q ss_pred             ccccccc-cCCC--cEEEeecCC
Q 020314          232 WSTFEPN-LGTT--GKVIDFNPS  251 (327)
Q Consensus       232 ~~~~~~~-l~~~--G~~v~~g~~  251 (327)
                      ....... +..+  ..+|+.+..
T Consensus        77 s~~~~~~l~~~g~~~~VIDlSsd   99 (147)
T d1mb4a1          77 TEKVYPALRQAGWKGYWIDAAST   99 (147)
T ss_dssp             HHHHHHHHHHTTCCSEEEESSST
T ss_pred             HHHHhHHHHHcCCceEEEeCCcc
Confidence            4444443 3333  247887754

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.38  E-value=0.31  Score=37.21  Aligned_cols=94  Identities=16%  Similarity=0.073  Sum_probs=58.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC-CcH----HHHHhcCCCEEEeCCCCC-----cccccCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCGA-RNI----ELVKSLGADEVLDYKTPD-----GAALKSPSGRK  219 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~~-~~~----~~~~~lg~~~v~~~~~~~-----~~~~~~~~~~~  219 (327)
                      .+.++||-.|  ...|..++.+|+.+  +.+++.+..+ +..    +..+..|....+.....+     ...........
T Consensus        58 ~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~~~~  135 (219)
T d2avda1          58 IQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT  135 (219)
T ss_dssp             TTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred             cCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhcccCC
Confidence            6778999998  66788888998876  5699988844 333    334455544322221111     11222223356


Q ss_pred             ccEEEe-CCCCC---cccccccccCCCcEEEe
Q 020314          220 YDAVIN-CVTGI---PWSTFEPNLGTTGKVID  247 (327)
Q Consensus       220 ~d~v~d-~~g~~---~~~~~~~~l~~~G~~v~  247 (327)
                      ||+||- +--..   .++.++++|+++|.++.
T Consensus       136 fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~  167 (219)
T d2avda1         136 FDVAVVDADKENCSAYYERCLQLLRPGGILAV  167 (219)
T ss_dssp             EEEEEECSCSTTHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEE
Confidence            999874 33322   26688899999998875

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.37  E-value=0.27  Score=39.95  Aligned_cols=88  Identities=19%  Similarity=0.222  Sum_probs=48.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCcHH----HHHhcCCC---EEEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGARNIE----LVKSLGAD---EVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~~~~~----~~~~lg~~---~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      .+|++||-.|+ | .|.+++.+|+ .|+ +|+++..++...    ..+..+..   .++..+..+   +. .....+|+|
T Consensus        32 ~~~~~VLDiGc-G-~G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~---~~-~~~~~~D~i  104 (316)
T d1oria_          32 FKDKVVLDVGS-G-TGILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEE---VE-LPVEKVDII  104 (316)
T ss_dssp             HTTCEEEEETC-T-TSHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTT---CC-CSSSCEEEE
T ss_pred             CCcCEEEEEec-C-CcHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHH---cc-cccceeEEE
Confidence            58899999983 4 4777776666 576 799998543322    22333332   122221111   11 223568998


Q ss_pred             EeCCCCC------ccc----ccccccCCCcEEE
Q 020314          224 INCVTGI------PWS----TFEPNLGTTGKVI  246 (327)
Q Consensus       224 ~d~~g~~------~~~----~~~~~l~~~G~~v  246 (327)
                      +......      .+.    ..-+.|+|+|+++
T Consensus       105 vs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         105 ISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             EECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            7533221      122    2235999999886

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.32  E-value=0.52  Score=32.34  Aligned_cols=35  Identities=14%  Similarity=0.119  Sum_probs=30.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +.+++++|.| +|.+|+=+++.+..+|.+|+.+.+.
T Consensus        24 ~~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~   58 (125)
T d1ojta2          24 EVPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMM   58 (125)
T ss_dssp             CCCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             ccCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEee
Confidence            5678999999 7999999999999999999999743

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=87.24  E-value=1.3  Score=32.27  Aligned_cols=133  Identities=17%  Similarity=0.067  Sum_probs=72.8

Q ss_pred             eEEEEcCCChHHHH-HHHHHHhC-C-CeEEEEecC--CcH-HHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          156 NILITAASGAVGLY-AVQLAKLG-N-THVTATCGA--RNI-ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       156 ~vlV~g~~g~~G~~-~~~la~~~-g-~~v~~~~~~--~~~-~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +|.|.| .|.+|.- .+...+.. + .+++++++.  ++. .+++.++...+.+.  . .+.++   ...+|+|+-|+..
T Consensus         5 rigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~--~-~ell~---~~~id~v~I~tp~   77 (181)
T d1zh8a1           5 RLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDS--Y-EELLE---SGLVDAVDLTLPV   77 (181)
T ss_dssp             EEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESC--H-HHHHH---SSCCSEEEECCCG
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeee--e-ecccc---ccccceeeccccc
Confidence            588999 7999964 56666654 3 488888744  333 34567776655421  1 12222   2458999988886


Q ss_pred             Cc-ccccccccCCCcEEEeecCC-c--hhHHHHhhhhccccceee-EEEEeCC--CHHHHHHHHHHHHCCceeE
Q 020314          230 IP-WSTFEPNLGTTGKVIDFNPS-P--RVLLTFAWKKLTFSKKQL-VPFSVSP--KGENLDFLVKLVKEGKLKT  296 (327)
Q Consensus       230 ~~-~~~~~~~l~~~G~~v~~g~~-~--~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~g~l~~  296 (327)
                      .. ...+..++..+ +=|.+.-+ .  .....-......-++..+ .++....  ....+..+.+++++|++..
T Consensus        78 ~~h~~~~~~al~~g-k~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~ig~  150 (181)
T d1zh8a1          78 ELNLPFIEKALRKG-VHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKPND  150 (181)
T ss_dssp             GGHHHHHHHHHHTT-CEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCCCS
T ss_pred             cccccccccccccc-hhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCCcc
Confidence            65 66777777765 44444322 1  111111111111122222 2211111  2356788889999988754

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.23  E-value=0.35  Score=39.52  Aligned_cols=31  Identities=16%  Similarity=0.128  Sum_probs=28.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      ++|||+||+|=+|...+..+...|.+|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            5799999999999999999888899999985

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.19  E-value=0.17  Score=40.56  Aligned_cols=92  Identities=14%  Similarity=0.150  Sum_probs=53.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH----hcCCCE------EEeCCCCCcccccCCCCCcc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK----SLGADE------VLDYKTPDGAALKSPSGRKY  220 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~----~lg~~~------v~~~~~~~~~~~~~~~~~~~  220 (327)
                      +++.+||=.|+  |.|..+..+++. |++|++++-+ +-++.++    ..+...      +.+.+-. ...........+
T Consensus        55 ~~~~~vLD~Gc--G~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~f  130 (292)
T d1xvaa_          55 HGCHRVLDVAC--GTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDVPAGDGF  130 (292)
T ss_dssp             TTCCEEEESSC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHSCCTTCE
T ss_pred             cCCCEEEEecC--CCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeecccc-ccccccCCCCCc
Confidence            56778998883  467778888875 8999999844 4444443    222211      1111100 000112234569


Q ss_pred             cEEEeCCCC------C---------cccccccccCCCcEEEe
Q 020314          221 DAVINCVTG------I---------PWSTFEPNLGTTGKVID  247 (327)
Q Consensus       221 d~v~d~~g~------~---------~~~~~~~~l~~~G~~v~  247 (327)
                      |.|+.....      +         .+..+.+.|+|+|.++.
T Consensus       131 d~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         131 DAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             EEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             eEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            988864321      0         25667789999999876

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=86.96  E-value=3.5  Score=28.61  Aligned_cols=30  Identities=23%  Similarity=0.211  Sum_probs=24.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC--eEEEEe
Q 020314          156 NILITAASGAVGLYAVQLAKLGNT--HVTATC  185 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~  185 (327)
                      +|.|.|++|.+|..++..+...+.  +++..+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~D   33 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVD   33 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEe
Confidence            588999899999998888887775  566555

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.93  E-value=1.1  Score=30.99  Aligned_cols=35  Identities=26%  Similarity=0.276  Sum_probs=30.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +++++++|.| +|.+|+-++..+...|.+|..+.+.
T Consensus        33 ~~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~   67 (133)
T d1q1ra2          33 IADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTA   67 (133)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             ccCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeec
Confidence            5678999999 7999999999999999999998853

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=86.92  E-value=0.5  Score=38.21  Aligned_cols=35  Identities=20%  Similarity=0.143  Sum_probs=29.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCc
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNTHVTATCGARN  189 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~  189 (327)
                      .++|+|+| +|..|+.++..+...|.+|.++....+
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            56799999 799999999888888999998885543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=86.42  E-value=0.6  Score=33.01  Aligned_cols=34  Identities=12%  Similarity=0.119  Sum_probs=25.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGN--THVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~~  187 (327)
                      +..+|.|.| +|.+|...+..+...|  .+++.++..
T Consensus         4 ~~~KI~IIG-aG~VG~~~A~~l~~~~~~~elvL~D~~   39 (146)
T d1ez4a1           4 NHQKVVLVG-DGAVGSSYAFAMAQQGIAEEFVIVDVV   39 (146)
T ss_dssp             TBCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcCCCcEEEEeecc
Confidence            345799999 6999998887777666  378877754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=86.23  E-value=0.82  Score=35.62  Aligned_cols=33  Identities=12%  Similarity=-0.002  Sum_probs=30.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC  185 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~  185 (327)
                      -+|.+|+|.| .|.+|..+++++...|++|++++
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            3788999999 89999999999999999999886

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=86.21  E-value=2.5  Score=29.56  Aligned_cols=95  Identities=12%  Similarity=0.127  Sum_probs=58.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-Cc-HHHH---HhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RN-IELV---KSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTG  229 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~-~~~~---~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~  229 (327)
                      +.++|.| .|.+|..+++.+...|.+++++... ++ .+..   ...+.. ++..+..+...++..+-..+|.++-++++
T Consensus         4 nHiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~   81 (153)
T d1id1a_           4 DHFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGIDRCRAILALSDN   81 (153)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcE-EEEccCcchHHHHHhccccCCEEEEcccc
Confidence            4699999 6999999999999999998888743 32 2222   233443 34344334344444344568899988876


Q ss_pred             Cc----ccccccccCCCcEEEeecCC
Q 020314          230 IP----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       230 ~~----~~~~~~~l~~~G~~v~~g~~  251 (327)
                      +.    .....+.+.+.-+++.....
T Consensus        82 d~~n~~~~~~~r~~~~~~~iia~~~~  107 (153)
T d1id1a_          82 DADNAFVVLSAKDMSSDVKTVLAVSD  107 (153)
T ss_dssp             HHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred             HHHHHHHHHHHHHhCCCCceEEEEcC
Confidence            54    22233445566666654444

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.85  E-value=0.52  Score=35.07  Aligned_cols=32  Identities=19%  Similarity=0.209  Sum_probs=28.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++|.|.| +|.+|...++++...|.+|+..+.+
T Consensus         5 kkvaViG-aG~mG~~iA~~~a~~G~~V~l~D~~   36 (192)
T d1f0ya2           5 KHVTVIG-GGLMGAGIAQVAAATGHTVVLVDQT   36 (192)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             EEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECC
Confidence            5799999 6999999999999999999999854

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.85  E-value=0.21  Score=40.01  Aligned_cols=94  Identities=19%  Similarity=0.213  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHHhcCC--------C--EEEeCCCCCcccccCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVKSLGA--------D--EVLDYKTPDGAALKSPSGRK  219 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~~lg~--------~--~v~~~~~~~~~~~~~~~~~~  219 (327)
                      .+.++|||.|  ||-|.++-.++++.+. ++.++. +++-.+.++++-.        .  .++..+  ..+.++....+.
T Consensus        79 ~~pk~VLiiG--gG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~D--a~~~l~~~~~~~  154 (290)
T d1xj5a_          79 PNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGD--GVAFLKNAAEGS  154 (290)
T ss_dssp             SCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESC--HHHHHHTSCTTC
T ss_pred             CCCcceEEec--CCchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEcc--HHHHHhhccccC
Confidence            4567899999  4456667788887775 777777 4444455543321        1  111111  112233334457


Q ss_pred             ccEEE-eCCCCC----------cccccccccCCCcEEEeec
Q 020314          220 YDAVI-NCVTGI----------PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       220 ~d~v~-d~~g~~----------~~~~~~~~l~~~G~~v~~g  249 (327)
                      +|+|+ |+....          .++.+.++|+++|.++.-.
T Consensus       155 yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         155 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            99886 444321          1445667999999998643

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=85.72  E-value=0.66  Score=36.65  Aligned_cols=72  Identities=11%  Similarity=0.082  Sum_probs=40.6

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCC-eEEEEec--C-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC
Q 020314          157 ILITAASGAVGLYAVQLAKLGNT-HVTATCG--A-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT  228 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~--~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g  228 (327)
                      |||+||+|=+|..++..+...|. +|+++.+  . .+.............+..+..........-..++.++.+.+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999998888887797 6777752  2 23333344443333332221111122122234667766543

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.46  E-value=1.2  Score=31.78  Aligned_cols=34  Identities=15%  Similarity=0.161  Sum_probs=26.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNT--HVTATCGA  187 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~  187 (327)
                      +..+|.|.| +|.+|..++..+...|.  +++.++..
T Consensus        18 ~~~KI~IIG-aG~VG~~~A~~l~~~~l~~elvL~D~~   53 (159)
T d2ldxa1          18 SRCKITVVG-VGDVGMACAISILLKGLADELALVDAD   53 (159)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHTTTSCSEEEEECSC
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence            334699999 69999999988887774  67777643

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=85.35  E-value=1.6  Score=36.23  Aligned_cols=52  Identities=19%  Similarity=0.181  Sum_probs=40.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC----CcHHHHHhcCCCEEEeC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA----RNIELVKSLGADEVLDY  204 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~----~~~~~~~~lg~~~v~~~  204 (327)
                      +++. .+|...+|..|.+++..|+.+|.+++++...    .|.+.++.+|++-+...
T Consensus       142 ~~g~-~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~  197 (382)
T d1wkva1         142 EKGS-LVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDP  197 (382)
T ss_dssp             CTTC-EEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEET
T ss_pred             CCCC-EEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeecC
Confidence            5665 4566668999999999999999987777632    46778899999866543

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=85.34  E-value=0.18  Score=37.73  Aligned_cols=89  Identities=19%  Similarity=0.171  Sum_probs=51.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEec-CCcHHHHH----hcCC--CE--EEeCCCCCcccccCCCCCcccE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCG-ARNIELVK----SLGA--DE--VLDYKTPDGAALKSPSGRKYDA  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~-~~~~~~~~----~lg~--~~--v~~~~~~~~~~~~~~~~~~~d~  222 (327)
                      .++++||=.|  .|.|..++.+++ .+.+|++++- +...+.++    ..+.  ..  ++..+-     .+...++.+|+
T Consensus        51 ~~~~~VLDiG--cG~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~-----~~~~~~~~fD~  122 (194)
T d1dusa_          51 DKDDDILDLG--CGYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDL-----YENVKDRKYNK  122 (194)
T ss_dssp             CTTCEEEEET--CTTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECST-----TTTCTTSCEEE
T ss_pred             CCCCeEEEEe--ecCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcch-----hhhhccCCceE
Confidence            7899999988  345666677766 4568999884 33333332    2332  21  121111     11223457999


Q ss_pred             EEeCCC----CC----cccccccccCCCcEEEee
Q 020314          223 VINCVT----GI----PWSTFEPNLGTTGKVIDF  248 (327)
Q Consensus       223 v~d~~g----~~----~~~~~~~~l~~~G~~v~~  248 (327)
                      |+-...    .+    .+..+.+.|+++|+++.+
T Consensus       123 Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         123 IITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             EEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            996432    11    155666789999987643

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=85.28  E-value=1.2  Score=32.33  Aligned_cols=94  Identities=14%  Similarity=0.155  Sum_probs=52.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC----CCeEEEEecCC---cHHHHHhcC-------CCE-------EEe------CCCCC
Q 020314          156 NILITAASGAVGLYAVQLAKLG----NTHVTATCGAR---NIELVKSLG-------ADE-------VLD------YKTPD  208 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~----g~~v~~~~~~~---~~~~~~~lg-------~~~-------v~~------~~~~~  208 (327)
                      +|.|.| -|-+|.++.+.+...    ..+++++-...   .+.++-++.       ...       +++      +...+
T Consensus         3 kigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            488999 899999999776532    23566664332   233332221       111       010      01111


Q ss_pred             cccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCC
Q 020314          209 GAALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       209 ~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~  251 (327)
                      ...+.+ ...++|+|+||+|--. ...+..+|..+-+-|.+..+
T Consensus        82 p~~i~W-~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP  124 (173)
T d1obfo1          82 PAQLPW-GALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAP  124 (173)
T ss_dssp             GGGSCT-TTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSC
T ss_pred             HHHCcc-cccccceEEEecccccCHHHHHHHhccCCcceEEecC
Confidence            111111 2357999999999644 55667788777666655544

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=85.12  E-value=1.6  Score=31.40  Aligned_cols=95  Identities=14%  Similarity=0.078  Sum_probs=54.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC---CcHHHHHhcC-------CCEEEeC-----CC--------CCccc
Q 020314          156 NILITAASGAVGLYAVQLAKLGN-THVTATCGA---RNIELVKSLG-------ADEVLDY-----KT--------PDGAA  211 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g-~~v~~~~~~---~~~~~~~~lg-------~~~v~~~-----~~--------~~~~~  211 (327)
                      +|.|.| -|.+|.++.+.+.... .+++++-..   +.+.++-++-       .+--++.     ..        .+...
T Consensus         3 kigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~   81 (166)
T d1gado1           3 KVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN   81 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence            478999 8999999998888664 577777543   2233332221       1110100     00        00011


Q ss_pred             ccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCCc
Q 020314          212 LKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPSP  252 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~  252 (327)
                      +.+ ...++|+|+||+|-.. .+.+..++..+-+-|.+..+.
T Consensus        82 i~W-~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          82 LKW-DEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             GCH-HHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             CCc-cccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence            111 1236999999999655 567777887776556565443

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=84.98  E-value=0.077  Score=41.48  Aligned_cols=87  Identities=18%  Similarity=0.155  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHH----hcCCC-EEEeCCCCCcccccCCCCCcccEEEeC
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVK----SLGAD-EVLDYKTPDGAALKSPSGRKYDAVINC  226 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~----~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d~  226 (327)
                      ++++||=.|+ | .|..+..+++ .|.++++++.+ +-++.++    ..+.. .++..   +..  .....+.||+|+..
T Consensus        37 ~~~~vLDiGC-G-~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~---d~~--~~~~~~~fD~i~~~  108 (246)
T d1y8ca_          37 VFDDYLDLAC-G-TGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ---DIS--NLNINRKFDLITCC  108 (246)
T ss_dssp             CTTEEEEETC-T-TSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC---CGG--GCCCSCCEEEEEEC
T ss_pred             CCCeEEEEeC-c-CCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeecc---chh--hhccccccccccee
Confidence            5678999984 3 5666666666 47899999854 4444443    33432 22211   111  11123569999864


Q ss_pred             CCC------C-----cccccccccCCCcEEEe
Q 020314          227 VTG------I-----PWSTFEPNLGTTGKVID  247 (327)
Q Consensus       227 ~g~------~-----~~~~~~~~l~~~G~~v~  247 (327)
                      .+.      .     .++.+.++|+|+|.++.
T Consensus       109 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         109 LDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             TTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            331      0     25567789999999874

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=84.72  E-value=0.23  Score=35.42  Aligned_cols=81  Identities=9%  Similarity=0.056  Sum_probs=43.3

Q ss_pred             EEEcCCChHHHHHHHHHHhCCCeEE-EEecC-CcHHHH-HhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCcccc
Q 020314          158 LITAASGAVGLYAVQLAKLGNTHVT-ATCGA-RNIELV-KSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIPWST  234 (327)
Q Consensus       158 lV~g~~g~~G~~~~~la~~~g~~v~-~~~~~-~~~~~~-~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~  234 (327)
                      =+.| +|.+|.+.++.++. +.++. +..++ ++.+.+ +.++.. ..+..    +.     -...|+||=|+..+.+..
T Consensus         3 gfIG-~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~-~~~~~----~~-----~~~~DiVil~v~d~~i~~   70 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGK-AATLE----KH-----PELNGVVFVIVPDRYIKT   70 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCC-CCSSC----CC-----CC---CEEECSCTTTHHH
T ss_pred             EEEe-CcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhccccc-ccchh----hh-----hccCcEEEEeccchhhhH
Confidence            3567 89999988876654 44443 33444 454444 444432 21111    11     134789999998777777


Q ss_pred             cccccCCC-cEEEeecC
Q 020314          235 FEPNLGTT-GKVIDFNP  250 (327)
Q Consensus       235 ~~~~l~~~-G~~v~~g~  250 (327)
                      .+..++.. ..++++..
T Consensus        71 v~~~l~~~~~ivi~~s~   87 (153)
T d2i76a2          71 VANHLNLGDAVLVHCSG   87 (153)
T ss_dssp             HHTTTCCSSCCEEECCS
T ss_pred             HHhhhcccceeeeeccc
Confidence            77777644 44556553

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=84.28  E-value=1.8  Score=30.31  Aligned_cols=32  Identities=22%  Similarity=0.166  Sum_probs=25.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNT--HVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~  187 (327)
                      +|.|.||+|.+|..++.++...+.  ++..++..
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~   35 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGRE   35 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccch
Confidence            488999889999999998888884  77766644

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=84.21  E-value=2.1  Score=30.94  Aligned_cols=95  Identities=16%  Similarity=0.061  Sum_probs=54.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-CcHHHHHhcCCCE--EEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCGA-RNIELVKSLGADE--VLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~-~~~~~~~~lg~~~--v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      .+|-+.| .|.+|...+.-+...|.+|++..++ ++.+.+.+.++..  ....... .......  ...|.++-++....
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~-~~~~~~~--~~~~~ii~~~~~~~   78 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSL-EEMVSKL--KKPRRIILLVKAGQ   78 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSH-HHHHHHB--CSSCEEEECSCTTH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhh-hhhhhhh--cccceEEEecCchH
Confidence            3588999 8999998887777789999998854 5666554443321  0000000 0111111  23567766665432


Q ss_pred             -----ccccccccCCCcEEEeecCCch
Q 020314          232 -----WSTFEPNLGTTGKVIDFNPSPR  253 (327)
Q Consensus       232 -----~~~~~~~l~~~G~~v~~g~~~~  253 (327)
                           .......+.++-.+++++....
T Consensus        79 ~v~~v~~~l~~~~~~g~iiid~sT~~~  105 (176)
T d2pgda2          79 AVDNFIEKLVPLLDIGDIIIDGGNSEY  105 (176)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECSCCCH
T ss_pred             HHHHHHHHHHhccccCcEEEecCcchh
Confidence                 3344556677777777765543

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.03  E-value=0.49  Score=38.49  Aligned_cols=88  Identities=25%  Similarity=0.212  Sum_probs=48.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCCcHH----HHHhcCCC-E--EEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGARNIE----LVKSLGAD-E--VLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~~~~~----~~~~lg~~-~--v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      .+|++||-.|+ | .|.++..+|+ .|+ +|+++..++..+    ..+..+.. .  ++..+-.+   + ......+|+|
T Consensus        37 ~~~~~VLDlGc-G-tG~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~---l-~~~~~~~D~i  109 (328)
T d1g6q1_          37 FKDKIVLDVGC-G-TGILSMFAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLED---V-HLPFPKVDII  109 (328)
T ss_dssp             HTTCEEEEETC-T-TSHHHHHHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTT---S-CCSSSCEEEE
T ss_pred             CCcCEEEEeCC-C-CCHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhh---c-cCcccceeEE
Confidence            58899999983 3 4666665555 566 898888554322    22334432 1  22221111   1 1223569998


Q ss_pred             EeCCCC-----C-ccc----ccccccCCCcEEE
Q 020314          224 INCVTG-----I-PWS----TFEPNLGTTGKVI  246 (327)
Q Consensus       224 ~d~~g~-----~-~~~----~~~~~l~~~G~~v  246 (327)
                      +...-.     + .+.    ..-+.|+|+|+++
T Consensus       110 ~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         110 ISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             EECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             EEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            753321     1 122    2235899999886

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=83.79  E-value=3.7  Score=29.52  Aligned_cols=94  Identities=13%  Similarity=0.119  Sum_probs=52.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC---CcHHHHHhcCC-------CEEEe-------------CCCCCccc
Q 020314          156 NILITAASGAVGLYAVQLAKLG-NTHVTATCGA---RNIELVKSLGA-------DEVLD-------------YKTPDGAA  211 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~---~~~~~~~~lg~-------~~v~~-------------~~~~~~~~  211 (327)
                      +|.|.| -|.+|.++.+.+... ..+++++-..   +..+++-++..       +.-.+             +...+...
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~   81 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN   81 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence            578999 899999999877644 4577777533   23333322211       10011             01111111


Q ss_pred             ccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCC
Q 020314          212 LKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       212 ~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~  251 (327)
                      +.+ ...++|+|+||+|... .+.+..++..+-+-|.+..+
T Consensus        82 i~W-~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap  121 (171)
T d3cmco1          82 LAW-GEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAP  121 (171)
T ss_dssp             CCT-GGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             ccc-cccCCcEEEEecCccCCHHHHHHHHhCCCceEEEecc
Confidence            111 1236999999999655 66777778777655555443

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=83.79  E-value=2.3  Score=30.50  Aligned_cols=83  Identities=13%  Similarity=0.176  Sum_probs=54.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC-CcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc-c
Q 020314          156 NILITAASGAVGLYAVQLAKLG-NTHVTATCGA-RNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP-W  232 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~-~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~  232 (327)
                      +|.|+| .|.+|...+..++.. +.+++++++. .+.     .....+..+.+    .....  ..+|+|+.|++... .
T Consensus         5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~-----~~~~~~~~~~~----~~~~~--~~~D~Vvi~tp~~~h~   72 (170)
T d1f06a1           5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATL-----DTKTPVFDVAD----VDKHA--DDVDVLFLCMGSATDI   72 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCC-----SSSSCEEEGGG----GGGTT--TTCSEEEECSCTTTHH
T ss_pred             eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccc-----ccccccccchh----hhhhc--cccceEEEeCCCcccH
Confidence            589999 799999888887765 5688888743 211     11111222111    11111  34899999998766 8


Q ss_pred             cccccccCCCcEEEeecC
Q 020314          233 STFEPNLGTTGKVIDFNP  250 (327)
Q Consensus       233 ~~~~~~l~~~G~~v~~g~  250 (327)
                      +.+.++|..|-.++....
T Consensus        73 ~~a~~aL~aG~~vv~~~~   90 (170)
T d1f06a1          73 PEQAPKFAQFACTVDTYD   90 (170)
T ss_dssp             HHHHHHHTTTSEEECCCC
T ss_pred             HHHHHHHHCCCcEEEecC
Confidence            888899999888876543

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=83.72  E-value=0.42  Score=37.58  Aligned_cols=88  Identities=9%  Similarity=0.074  Sum_probs=52.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCCcHHHH----HhcCCC---EEEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATC-GARNIELV----KSLGAD---EVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~-~~~~~~~~----~~lg~~---~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      ++|++||-.+  .++|..++.+|+..+++|++++ +++..+++    +..+.+   .++..+..  +   ......+|.|
T Consensus       106 ~~g~~VlD~~--aG~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~--~---~~~~~~~D~I  178 (260)
T d2frna1         106 KPDELVVDMF--AGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR--D---FPGENIADRI  178 (260)
T ss_dssp             CTTCEEEETT--CTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT--T---CCCCSCEEEE
T ss_pred             CCccEEEECc--ceEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchH--H---hccCCCCCEE
Confidence            7899998876  4567777778887557999998 44443333    333432   22322211  1   1223458866


Q ss_pred             E-eCCCC--CcccccccccCCCcEEE
Q 020314          224 I-NCVTG--IPWSTFEPNLGTTGKVI  246 (327)
Q Consensus       224 ~-d~~g~--~~~~~~~~~l~~~G~~v  246 (327)
                      + +-...  ..+..+++.++++|.+.
T Consensus       179 i~~~p~~~~~~l~~a~~~l~~gG~lh  204 (260)
T d2frna1         179 LMGYVVRTHEFIPKALSIAKDGAIIH  204 (260)
T ss_dssp             EECCCSSGGGGHHHHHHHEEEEEEEE
T ss_pred             EECCCCchHHHHHHHHhhcCCCCEEE
Confidence            5 33222  23667888888888764

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=83.56  E-value=0.59  Score=35.97  Aligned_cols=31  Identities=10%  Similarity=0.200  Sum_probs=26.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNT-HVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~  187 (327)
                      .|+|+| +|..|+.++..++..|. +|+++...
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECC
Confidence            499999 79999999988888897 58887754

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=83.39  E-value=1.7  Score=31.08  Aligned_cols=35  Identities=11%  Similarity=0.029  Sum_probs=27.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT--HVTATCGA  187 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~  187 (327)
                      .+..+|.|.| +|.+|..++..+...|.  +++.++..
T Consensus        18 ~~~~KV~IIG-aG~VG~~~A~~l~~~~l~~ElvLiD~~   54 (160)
T d1i0za1          18 VPNNKITVVG-VGQVGMACAISILGKSLADELALVDVL   54 (160)
T ss_dssp             CCSSEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            4566899999 69999999988888875  67777644

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=83.29  E-value=0.3  Score=39.79  Aligned_cols=97  Identities=16%  Similarity=0.128  Sum_probs=53.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC-CcHHHH----HhcCCCEEEeCCCCC-ccccc--CCCCCcccE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA-RNIELV----KSLGADEVLDYKTPD-GAALK--SPSGRKYDA  222 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~-~~~~~~----~~lg~~~v~~~~~~~-~~~~~--~~~~~~~d~  222 (327)
                      ++|++||=.+  .++|..++.+|+. |+ +|++++.+ +..+.+    +..|...-+.....+ .....  ...+..||+
T Consensus       144 ~~g~~VLDl~--~g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~  220 (324)
T d2as0a2         144 QPGDRVLDVF--TYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI  220 (324)
T ss_dssp             CTTCEEEETT--CTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             CCCCeeeccc--Ccccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCc
Confidence            7889998776  3555566666655 55 89999844 444433    345542111111111 11111  113457999


Q ss_pred             EEeCCCC---C-------------cccccccccCCCcEEEeecCC
Q 020314          223 VINCVTG---I-------------PWSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       223 v~d~~g~---~-------------~~~~~~~~l~~~G~~v~~g~~  251 (327)
                      |+--...   .             .+..++++|+|+|.++.+...
T Consensus       221 Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         221 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             hhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            9843221   1             244567789999998876543

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.26  E-value=0.7  Score=36.42  Aligned_cols=30  Identities=20%  Similarity=0.180  Sum_probs=26.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      .|+|+| +|+.|++++..++..|.+|.++..
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~   33 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKAGIDNVILER   33 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCEEEECS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEeC
Confidence            499999 799999999999999999999874

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=83.23  E-value=0.48  Score=37.98  Aligned_cols=32  Identities=13%  Similarity=0.084  Sum_probs=28.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      ++|||+||+|-+|..+++.+...|..++++.+
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~   34 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT   34 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecC
Confidence            47999999999999999999888998877653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.85  E-value=1.1  Score=30.34  Aligned_cols=36  Identities=17%  Similarity=0.153  Sum_probs=30.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCC
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNTHVTATCGAR  188 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~  188 (327)
                      +.+++++|.| +|.+|+-+++.+..+|.+|+.+.+..
T Consensus        30 ~~~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hcCCcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            4557899999 79999999999999999999887543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=82.83  E-value=1.1  Score=33.06  Aligned_cols=86  Identities=15%  Similarity=0.001  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCeEEEEecCCcHHHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCC-CCc
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGNTHVTATCGARNIELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVT-GIP  231 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g-~~~  231 (327)
                      .+.+|.|+| .|.+|...+++++.+|++|+..++..+......      ...... .+.+     ...|++.-+.+ .+.
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~------~~~~~l-~ell-----~~sDii~i~~plt~~  109 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLGNA------TQVQHL-SDLL-----NMSDVVSLHVPENPS  109 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTC------EECSCH-HHHH-----HHCSEEEECCCSSTT
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccchhhhh------hhhhhH-HHHH-----hhccceeecccCCcc
Confidence            678999999 899999999999999999999985432211000      111100 1122     12577776665 221


Q ss_pred             -----ccccccccCCCcEEEeecCC
Q 020314          232 -----WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       232 -----~~~~~~~l~~~G~~v~~g~~  251 (327)
                           -...++.++++..+|.++..
T Consensus       110 T~~li~~~~l~~mk~~a~lIN~aRG  134 (188)
T d1sc6a1         110 TKNMMGAKEISLMKPGSLLINASRG  134 (188)
T ss_dssp             TTTCBCHHHHHHSCTTEEEEECSCS
T ss_pred             hhhhccHHHHhhCCCCCEEEEcCcH
Confidence                 22556788888888877654

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=82.54  E-value=0.74  Score=33.44  Aligned_cols=29  Identities=21%  Similarity=0.194  Sum_probs=26.1

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q 020314          157 ILITAASGAVGLYAVQLAKLGNTHVTATCG  186 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~  186 (327)
                      |+|+| +|+.|+.++..|...|.+|..+.+
T Consensus         4 ViIIG-gGpaGl~AAi~aar~G~~v~iie~   32 (184)
T d1fl2a1           4 VLIVG-SGPAGAAAAIYSARKGIRTGLMGE   32 (184)
T ss_dssp             EEEEC-CSHHHHHHHHHHHTTTCCEEEECS
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCeEEEEEE
Confidence            88999 799999999999999999888863

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=82.53  E-value=1.3  Score=31.11  Aligned_cols=32  Identities=19%  Similarity=0.135  Sum_probs=24.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC
Q 020314          155 KNILITAASGAVGLYAVQLAKLGNT--HVTATCGA  187 (327)
Q Consensus       155 ~~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~  187 (327)
                      .+|.|.| +|.+|..++..+...+.  +++.++..
T Consensus         2 ~Ki~IIG-aG~VG~~~a~~l~~~~l~~ElvL~D~~   35 (143)
T d1llda1           2 TKLAVIG-AGAVGSTLAFAAAQRGIAREIVLEDIA   35 (143)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            3588999 59999998888877764  67777744

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=82.47  E-value=0.66  Score=36.44  Aligned_cols=31  Identities=16%  Similarity=0.219  Sum_probs=27.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      +|+|+| +|..|+.++..+...|.+|+++...
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVG-GGISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEEC-CCHHHHHHHHHHHhCCCCEEEEecC
Confidence            389999 7999999999999899999988743

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=82.42  E-value=0.49  Score=37.48  Aligned_cols=93  Identities=15%  Similarity=0.189  Sum_probs=53.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEe-cCCcHHHHHhcC-----C---C--EEEeCCCCCcccccCCCCCc
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLGNT-HVTATC-GARNIELVKSLG-----A---D--EVLDYKTPDGAALKSPSGRK  219 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~-~~~~~~~~~~lg-----~---~--~v~~~~~~~~~~~~~~~~~~  219 (327)
                      .+.++|||.|  ||-|..+-.++++.+. ++.++. +++-.+.++++-     +   .  .++..+.  ..-++. ..+.
T Consensus        74 ~~p~~vLiiG--gG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~--~~~l~~-~~~~  148 (274)
T d1iy9a_          74 PNPEHVLVVG--GGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDG--FMHIAK-SENQ  148 (274)
T ss_dssp             SSCCEEEEES--CTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCS--HHHHHT-CCSC
T ss_pred             CCcceEEecC--CCCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechH--HHHHhh-cCCC
Confidence            4668999998  4557777788887765 788877 444444444321     1   1  1221111  122222 2457


Q ss_pred             ccEEE-eCCCCC----------cccccccccCCCcEEEeec
Q 020314          220 YDAVI-NCVTGI----------PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       220 ~d~v~-d~~g~~----------~~~~~~~~l~~~G~~v~~g  249 (327)
                      +|+|+ |.....          .++.+.++|+++|.++.-.
T Consensus       149 yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            99997 433211          1445566999999988643

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=82.41  E-value=0.53  Score=36.64  Aligned_cols=92  Identities=22%  Similarity=0.281  Sum_probs=54.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC-CCeEEEEecCCcHHH----HHhcCCC-EEEeCCCCCcccccCCCCCcccEEEe
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG-NTHVTATCGARNIEL----VKSLGAD-EVLDYKTPDGAALKSPSGRKYDAVIN  225 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~-g~~v~~~~~~~~~~~----~~~lg~~-~v~~~~~~~~~~~~~~~~~~~d~v~d  225 (327)
                      .+..+||=+|  +|.|..+..+++.. +.++++++.++..+.    +...+.. .+ .....+  ... ....++|+|+-
T Consensus        79 ~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~rv-~~~~~D--~~~-~~~~~~D~v~~  152 (253)
T d1tw3a2          79 TNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRV-DVVEGD--FFE-PLPRKADAIIL  152 (253)
T ss_dssp             TTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTE-EEEECC--TTS-CCSSCEEEEEE
T ss_pred             ccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccCHHHHHHHHHHHHHhhcccch-hhcccc--chh-hcccchhheee
Confidence            6778899888  56788888999876 568888775543332    2333322 11 111111  011 11246899884


Q ss_pred             CCC-----CC----cccccccccCCCcEEEeec
Q 020314          226 CVT-----GI----PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       226 ~~g-----~~----~~~~~~~~l~~~G~~v~~g  249 (327)
                      ...     .+    .++.+.+.|+|+|+++...
T Consensus       153 ~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e  185 (253)
T d1tw3a2         153 SFVLLNWPDHDAVRILTRCAEALEPGGRILIHE  185 (253)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ccccccCCchhhHHHHHHHHHhcCCCcEEEEEe
Confidence            322     11    1566778999999998764

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=82.09  E-value=3.2  Score=29.51  Aligned_cols=130  Identities=11%  Similarity=0.005  Sum_probs=70.0

Q ss_pred             eEEEEcCCChHHHH-HHHHHHhC-CCeEEEEecC-CcH-HHHHhcCCCEEEeCCCCCcccccCCCCCcccEEEeCCCCCc
Q 020314          156 NILITAASGAVGLY-AVQLAKLG-NTHVTATCGA-RNI-ELVKSLGADEVLDYKTPDGAALKSPSGRKYDAVINCVTGIP  231 (327)
Q Consensus       156 ~vlV~g~~g~~G~~-~~~la~~~-g~~v~~~~~~-~~~-~~~~~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~  231 (327)
                      +|.|.| +|.+|.- .....+.. +.++++.++. ++. ..++.++...+++  +. .+.++    ..+|+|+-|+....
T Consensus         3 rvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~-~~ll~----~~iD~V~I~tp~~~   74 (167)
T d1xeaa1           3 KIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT--DY-RDVLQ----YGVDAVMIHAATDV   74 (167)
T ss_dssp             EEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS--ST-TGGGG----GCCSEEEECSCGGG
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc--cH-HHhcc----cccceecccccccc
Confidence            578999 7999864 56666655 4566543333 343 3556777654332  11 12222    24899999988665


Q ss_pred             -ccccccccCCCcEEEeec----CCchhHHHHhhhhccccceeeEEEEeCCCHHHHHHHHHHHHCCceeE
Q 020314          232 -WSTFEPNLGTTGKVIDFN----PSPRVLLTFAWKKLTFSKKQLVPFSVSPKGENLDFLVKLVKEGKLKT  296 (327)
Q Consensus       232 -~~~~~~~l~~~G~~v~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~  296 (327)
                       .+.+..++..+=. |.+.    ........ ......-++..+.- .+......+.++++.+..|++..
T Consensus        75 H~~~~~~al~~gk~-V~~EKP~~~~~~e~~~-l~~~a~~~~~~~~v-g~~r~~~~~~~~~~~~~~G~ig~  141 (167)
T d1xeaa1          75 HSTLAAFFLHLGIP-TFVDKPLAASAQECEN-LYELAEKHHQPLYV-GFNGFDAMVQDWLQVAAAGKLPT  141 (167)
T ss_dssp             HHHHHHHHHHTTCC-EEEESCSCSSHHHHHH-HHHHHHHTTCCEEE-ECGTHHHHHHHHHHHHHHTCCCH
T ss_pred             cccccccccccccc-cccCCCCcCCHHHHHH-HHHHHHHcCCEEEE-EeCcCCHHHHHHHHHhhcCCCCc
Confidence             7777788876644 4443    22111111 11111222222221 12233455677888888888754

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=82.09  E-value=1.9  Score=30.43  Aligned_cols=33  Identities=21%  Similarity=0.172  Sum_probs=25.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 020314          154 QKNILITAASGAVGLYAVQLAKLGNT-HVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~  187 (327)
                      ..+|-|.| +|.+|...+.++...+. +++..+..
T Consensus         3 ~~KI~IIG-aG~VG~~~a~~l~~~~l~el~L~Di~   36 (150)
T d1t2da1           3 KAKIVLVG-SGMIGGVMATLIVQKNLGDVVLFDIV   36 (150)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHhCCCCeEEEEecc
Confidence            45799999 69999988888887776 76666643

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=82.07  E-value=1.1  Score=31.31  Aligned_cols=31  Identities=16%  Similarity=0.092  Sum_probs=23.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNT-HVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~~  187 (327)
                      +|.|.| +|.+|..++.++...+. +++.++..
T Consensus         3 KI~IIG-aG~VG~~~A~~l~~~~l~dl~l~D~~   34 (142)
T d1uxja1           3 KISIIG-AGFVGSTTAHWLAAKELGDIVLLDIV   34 (142)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSS
T ss_pred             eEEEEC-CCHHHHHHHHHHHhCCcceEEEEeec
Confidence            588899 69999988777666565 87777643

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=82.05  E-value=1  Score=31.57  Aligned_cols=30  Identities=23%  Similarity=0.185  Sum_probs=23.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC--eEEEEec
Q 020314          156 NILITAASGAVGLYAVQLAKLGNT--HVTATCG  186 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~  186 (327)
                      +|.|.| +|.+|...+..+...+.  +++.++.
T Consensus         3 KI~IIG-aG~VG~~~a~~l~~~~l~~el~L~D~   34 (142)
T d1y6ja1           3 KVAIIG-AGFVGASAAFTMALRQTANELVLIDV   34 (142)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCSSEEEEECC
T ss_pred             eEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEec
Confidence            488889 59999998888877764  6777773

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.79  E-value=0.75  Score=34.53  Aligned_cols=30  Identities=20%  Similarity=0.106  Sum_probs=26.7

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          157 ILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      |+|.| +|+.|+.++..+..+|.+|+++...
T Consensus         6 vvVIG-gGpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIG-GGPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEEC-CCHHHHHHHHHHHHCCCcEEEEEec
Confidence            88999 7999999999999999999998743

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=81.78  E-value=1.3  Score=33.51  Aligned_cols=89  Identities=15%  Similarity=0.069  Sum_probs=54.6

Q ss_pred             CeEEEEcCCChHHH-HHHHHHHhC-CCeEEEEecC--Cc-HHHHHhcCCC--EEEeCCCCCcccccCCCCCcccEEEeCC
Q 020314          155 KNILITAASGAVGL-YAVQLAKLG-NTHVTATCGA--RN-IELVKSLGAD--EVLDYKTPDGAALKSPSGRKYDAVINCV  227 (327)
Q Consensus       155 ~~vlV~g~~g~~G~-~~~~la~~~-g~~v~~~~~~--~~-~~~~~~lg~~--~v~~~~~~~~~~~~~~~~~~~d~v~d~~  227 (327)
                      -+|.|.| .|.+|. ..+...+.. +.+++++++.  ++ ...+++++.+  .+..+++. .+.+   ....+|+|+-++
T Consensus        34 iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~-~ell---~~~~iD~V~I~t  108 (221)
T d1h6da1          34 FGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNF-DKIA---KDPKIDAVYIIL  108 (221)
T ss_dssp             EEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSG-GGGG---GCTTCCEEEECS
T ss_pred             EEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCch-hhhc---ccccceeeeecc
Confidence            4789999 799986 344444443 6799988843  34 3455677654  23223221 1222   235689999988


Q ss_pred             CCCc-ccccccccCCCcEEEeec
Q 020314          228 TGIP-WSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       228 g~~~-~~~~~~~l~~~G~~v~~g  249 (327)
                      .... ...+.+++..+ +-+.+.
T Consensus       109 p~~~H~~~~~~al~~g-k~v~~E  130 (221)
T d1h6da1         109 PNSLHAEFAIRAFKAG-KHVMCE  130 (221)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEEEC
T ss_pred             chhhhhhHHHHhhhcc-hhhhcC
Confidence            8665 77777888765 444444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.68  E-value=0.95  Score=31.61  Aligned_cols=31  Identities=16%  Similarity=0.021  Sum_probs=22.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC--eEEEEecC
Q 020314          156 NILITAASGAVGLYAVQLAKLGNT--HVTATCGA  187 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~--~v~~~~~~  187 (327)
                      +|.|.| +|.+|..++..+...+.  ++...+..
T Consensus         2 KI~IIG-aG~VG~~~a~~l~~~~l~~el~L~Di~   34 (140)
T d1a5za1           2 KIGIVG-LGRVGSSTAFALLMKGFAREMVLIDVD   34 (140)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCCCEEEEEecc
Confidence            477889 59999988776665553  67766643

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.58  E-value=1.1  Score=34.85  Aligned_cols=30  Identities=27%  Similarity=0.278  Sum_probs=25.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHhCCC-eEEEEec
Q 020314          156 NILITAASGAVGLYAVQLAKLGNT-HVTATCG  186 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~~g~-~v~~~~~  186 (327)
                      .|+|+| +|..|++++.+++..|. .|.++.+
T Consensus         3 ~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er   33 (288)
T d3c96a1           3 DILIAG-AGIGGLSCALALHQAGIGKVTLLES   33 (288)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeC
Confidence            589999 79999999999999997 7777664

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=81.14  E-value=1.1  Score=32.15  Aligned_cols=33  Identities=21%  Similarity=0.315  Sum_probs=26.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC--CeEEEEec
Q 020314          153 QQKNILITAASGAVGLYAVQLAKLGN--THVTATCG  186 (327)
Q Consensus       153 ~~~~vlV~g~~g~~G~~~~~la~~~g--~~v~~~~~  186 (327)
                      .|++|+|.| +|.+|+.+++.++..+  .+|+.+..
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~   35 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEP   35 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEEC
Confidence            478999999 7999998888887766  47777663

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=81.04  E-value=0.41  Score=38.04  Aligned_cols=92  Identities=18%  Similarity=0.171  Sum_probs=56.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhC--CCeEEEEec-CCcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKLG--NTHVTATCG-ARNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAVI  224 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~~--g~~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v~  224 (327)
                      .++.+||=.| +| .|..+..+++..  +.+|++++. ++..+.++    ..+.+.-+...  +.....  -...+|+|+
T Consensus        26 ~~~~~ILDiG-cG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~--d~~~~~--~~~~fD~v~   99 (281)
T d2gh1a1          26 TKPVHIVDYG-CG-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEG--DATEIE--LNDKYDIAI   99 (281)
T ss_dssp             CSCCEEEEET-CT-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEES--CTTTCC--CSSCEEEEE
T ss_pred             CCcCEEEEec-Cc-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccc--cccccc--ccCCceEEE
Confidence            6778899888 43 688888888865  568999984 44444443    34433211111  111111  124699998


Q ss_pred             eCCC-----CC--cccccccccCCCcEEEeec
Q 020314          225 NCVT-----GI--PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       225 d~~g-----~~--~~~~~~~~l~~~G~~v~~g  249 (327)
                      ..-.     ++  .++.+.+.|+|+|.++...
T Consensus       100 ~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1         100 CHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             EESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            6443     21  2667888999999998654

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.78  E-value=0.94  Score=34.29  Aligned_cols=30  Identities=10%  Similarity=0.129  Sum_probs=26.3

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          157 ILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      |+|+| +|..|+.++..+...|.+|.++.+.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~   37 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQ   37 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCC
Confidence            88999 8999999888888889999998853

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=80.67  E-value=0.97  Score=34.62  Aligned_cols=30  Identities=20%  Similarity=0.204  Sum_probs=26.1

Q ss_pred             EEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          157 ILITAASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       157 vlV~g~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      |+|+| +|+.|++++..+...|.+|+.+...
T Consensus         5 ViIIG-aG~aGl~aA~~la~~G~~V~liEk~   34 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEEGANVLLLDKG   34 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            88999 7999998888888889999999843

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=80.46  E-value=1.7  Score=35.15  Aligned_cols=34  Identities=9%  Similarity=0.010  Sum_probs=28.6

Q ss_pred             CCeEEEEc--CCChHHHHHHHHHHhCCCeEEEEecC
Q 020314          154 QKNILITA--ASGAVGLYAVQLAKLGNTHVTATCGA  187 (327)
Q Consensus       154 ~~~vlV~g--~~g~~G~~~~~la~~~g~~v~~~~~~  187 (327)
                      ++..||+|  ++.++|.+.++.+...|++|+.+.+.
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~   37 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWP   37 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCc
Confidence            56789999  44699999999999999999987644

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=80.17  E-value=0.43  Score=36.38  Aligned_cols=93  Identities=11%  Similarity=0.043  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHh---CCCeEEEEec-CCcHHHHH----hcCCCEEEeCCCCCcccccCCCCCcccEE
Q 020314          152 GQQKNILITAASGAVGLYAVQLAKL---GNTHVTATCG-ARNIELVK----SLGADEVLDYKTPDGAALKSPSGRKYDAV  223 (327)
Q Consensus       152 ~~~~~vlV~g~~g~~G~~~~~la~~---~g~~v~~~~~-~~~~~~~~----~lg~~~v~~~~~~~~~~~~~~~~~~~d~v  223 (327)
                      +++.+||=.|+  |.|..+..+++.   .+++|++++- ++-++.++    ..+....+.....+.   .......+|++
T Consensus        38 ~~~~~vLDlGC--GtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~---~~~~~~~~d~i  112 (225)
T d1im8a_          38 TADSNVYDLGC--SRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDI---RHVEIKNASMV  112 (225)
T ss_dssp             CTTCEEEEESC--TTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCT---TTCCCCSEEEE
T ss_pred             CCCCEEEEecc--chhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchh---hccccccceee
Confidence            68889999984  456666666664   5789999994 44444443    333322111111111   11122346766


Q ss_pred             EeCCCC------C---cccccccccCCCcEEEeec
Q 020314          224 INCVTG------I---PWSTFEPNLGTTGKVIDFN  249 (327)
Q Consensus       224 ~d~~g~------~---~~~~~~~~l~~~G~~v~~g  249 (327)
                      +-+..-      +   .++.+.+.|+|+|.++...
T Consensus       113 ~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         113 ILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            654331      1   2566777999999998753

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=80.04  E-value=3.2  Score=29.78  Aligned_cols=94  Identities=15%  Similarity=0.126  Sum_probs=52.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHh---CCCeEEEEecC---CcHHHHHhcC-------CCEEEeC-----CC--------CCc
Q 020314          156 NILITAASGAVGLYAVQLAKL---GNTHVTATCGA---RNIELVKSLG-------ADEVLDY-----KT--------PDG  209 (327)
Q Consensus       156 ~vlV~g~~g~~G~~~~~la~~---~g~~v~~~~~~---~~~~~~~~lg-------~~~v~~~-----~~--------~~~  209 (327)
                      +|.|.| -|-+|.++.+.+..   ...+++++-..   +...++-++-       .+--++.     .+        .+.
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            588999 89999999987663   24688877532   3334333221       1100000     00        000


Q ss_pred             ccccCCCCCcccEEEeCCCCCc-ccccccccCCCcEEEeecCC
Q 020314          210 AALKSPSGRKYDAVINCVTGIP-WSTFEPNLGTTGKVIDFNPS  251 (327)
Q Consensus       210 ~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~  251 (327)
                      +.+.+ ...++|+|+||+|--. ...+..++..+-+-|.+..+
T Consensus        81 ~~i~W-~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP  122 (169)
T d1hdgo1          81 SKLPW-KDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAP  122 (169)
T ss_dssp             GGSCH-HHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             hhCCc-cccCCCEEEEecceeccccchhhhccCCCceEEEecc
Confidence            11111 1136999999999654 56677788777544555443